Query 009517
Match_columns 533
No_of_seqs 395 out of 3497
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 14:05:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009517.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009517hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02231 alanine transaminase 100.0 2.1E-75 4.6E-80 615.0 54.4 532 1-533 1-534 (534)
2 PTZ00377 alanine aminotransfer 100.0 4.5E-67 9.8E-72 551.9 53.8 477 55-532 4-481 (481)
3 KOG0258 Alanine aminotransfera 100.0 6.5E-66 1.4E-70 487.0 41.3 471 52-532 4-475 (475)
4 COG0436 Aspartate/tyrosine/aro 100.0 2.9E-63 6.3E-68 504.9 43.8 358 99-527 30-392 (393)
5 PLN02368 alanine transaminase 100.0 2.9E-58 6.3E-63 471.4 43.9 396 56-461 6-402 (407)
6 PRK13355 bifunctional HTH-doma 100.0 9.6E-56 2.1E-60 469.6 42.3 394 61-528 119-516 (517)
7 PLN00175 aminotransferase fami 100.0 2E-53 4.4E-58 439.6 41.6 377 61-525 32-412 (413)
8 PRK06855 aminotransferase; Val 100.0 5.3E-53 1.2E-57 439.2 42.6 390 75-527 19-430 (433)
9 PLN00145 tyrosine/nicotianamin 100.0 7.4E-53 1.6E-57 437.0 42.1 368 99-530 54-428 (430)
10 PRK07366 succinyldiaminopimela 100.0 4.4E-53 9.6E-58 435.5 39.3 382 63-524 5-388 (388)
11 KOG0257 Kynurenine aminotransf 100.0 2.2E-54 4.7E-59 416.3 25.2 389 64-521 11-414 (420)
12 PRK09147 succinyldiaminopimela 100.0 2.7E-52 5.8E-57 430.7 41.0 380 64-525 4-395 (396)
13 PRK08636 aspartate aminotransf 100.0 3.9E-52 8.6E-57 430.0 42.0 389 65-527 10-401 (403)
14 KOG0259 Tyrosine aminotransfer 100.0 4.7E-52 1E-56 392.6 38.7 369 98-529 62-436 (447)
15 PRK07681 aspartate aminotransf 100.0 6.5E-52 1.4E-56 428.1 40.9 377 62-522 6-384 (399)
16 PLN02187 rooty/superroot1 100.0 1E-51 2.2E-56 431.2 42.5 371 97-531 66-443 (462)
17 PRK06207 aspartate aminotransf 100.0 1E-51 2.2E-56 426.5 41.8 360 98-528 40-404 (405)
18 PRK06348 aspartate aminotransf 100.0 1.7E-51 3.6E-56 422.9 41.3 351 99-523 31-382 (384)
19 PRK08068 transaminase; Reviewe 100.0 1.8E-51 3.9E-56 423.6 40.3 376 64-522 8-385 (389)
20 PRK08960 hypothetical protein; 100.0 3E-51 6.5E-56 421.6 41.2 378 63-525 7-386 (387)
21 PLN00143 tyrosine/nicotianamin 100.0 3.9E-51 8.4E-56 422.7 41.1 369 97-529 32-407 (409)
22 TIGR03538 DapC_gpp succinyldia 100.0 3.9E-51 8.5E-56 421.6 40.9 378 64-523 3-392 (393)
23 PLN02656 tyrosine transaminase 100.0 7.4E-51 1.6E-55 420.9 42.1 368 99-529 33-406 (409)
24 PRK09276 LL-diaminopimelate am 100.0 5.6E-51 1.2E-55 419.6 40.5 377 63-522 6-384 (385)
25 PRK09148 aminotransferase; Val 100.0 7.7E-51 1.7E-55 420.2 41.6 387 64-530 6-394 (405)
26 PRK06107 aspartate aminotransf 100.0 5.5E-51 1.2E-55 421.4 40.5 390 63-527 8-401 (402)
27 PRK05942 aspartate aminotransf 100.0 7.2E-51 1.6E-55 419.6 41.1 376 64-522 11-388 (394)
28 TIGR03540 DapC_direct LL-diami 100.0 7E-51 1.5E-55 418.6 40.9 376 64-522 5-382 (383)
29 PRK09265 aminotransferase AlaT 100.0 1.2E-50 2.6E-55 419.4 42.6 392 63-528 8-403 (404)
30 PRK07682 hypothetical protein; 100.0 4E-51 8.7E-56 419.7 38.1 354 99-527 22-377 (378)
31 TIGR01264 tyr_amTase_E tyrosin 100.0 2.9E-50 6.3E-55 416.2 40.9 361 99-526 33-399 (401)
32 PRK07337 aminotransferase; Val 100.0 2.9E-50 6.3E-55 414.6 39.7 381 63-524 5-387 (388)
33 PRK06108 aspartate aminotransf 100.0 2.9E-50 6.3E-55 414.3 39.0 354 99-525 26-381 (382)
34 PRK07324 transaminase; Validat 100.0 7.1E-51 1.5E-55 415.9 34.1 344 98-527 27-371 (373)
35 PLN02450 1-aminocyclopropane-1 100.0 6.3E-50 1.4E-54 418.5 40.3 346 160-528 79-432 (468)
36 PTZ00433 tyrosine aminotransfe 100.0 1.1E-49 2.4E-54 412.8 41.1 367 99-528 35-410 (412)
37 COG1167 ARO8 Transcriptional r 100.0 1.5E-49 3.3E-54 413.3 39.8 362 97-529 89-458 (459)
38 PRK08912 hypothetical protein; 100.0 1.7E-49 3.8E-54 408.7 39.8 356 99-526 28-386 (387)
39 PRK08361 aspartate aminotransf 100.0 1.2E-49 2.6E-54 410.2 38.2 355 99-526 35-390 (391)
40 PLN02607 1-aminocyclopropane-1 100.0 5.7E-49 1.2E-53 408.1 42.9 348 160-529 88-440 (447)
41 PRK08363 alanine aminotransfer 100.0 5.6E-49 1.2E-53 406.3 41.7 376 74-527 16-395 (398)
42 PRK07309 aromatic amino acid a 100.0 8.9E-49 1.9E-53 403.4 42.9 356 99-527 32-389 (391)
43 PRK12414 putative aminotransfe 100.0 5.7E-49 1.2E-53 403.9 41.3 349 99-522 31-383 (384)
44 PRK07590 L,L-diaminopimelate a 100.0 3.9E-49 8.4E-54 408.5 39.5 380 60-523 3-408 (409)
45 PRK06290 aspartate aminotransf 100.0 1.4E-48 3E-53 402.6 42.0 356 98-527 45-406 (410)
46 PRK07683 aminotransferase A; V 100.0 7.8E-49 1.7E-53 403.3 39.7 353 99-527 30-384 (387)
47 PLN02376 1-aminocyclopropane-1 100.0 7.6E-49 1.6E-53 411.5 40.3 348 160-528 87-440 (496)
48 PRK05957 aspartate aminotransf 100.0 1.6E-48 3.4E-53 401.3 41.7 356 99-529 29-388 (389)
49 PRK05839 hypothetical protein; 100.0 1.3E-48 2.7E-53 399.7 40.2 367 68-525 3-373 (374)
50 PRK07550 hypothetical protein; 100.0 1.9E-48 4.2E-53 400.8 41.8 379 63-523 4-384 (386)
51 PRK07568 aspartate aminotransf 100.0 1.8E-48 3.9E-53 402.9 41.7 382 64-529 6-395 (397)
52 TIGR01265 tyr_nico_aTase tyros 100.0 1.6E-48 3.4E-53 403.2 41.1 365 99-527 33-402 (403)
53 PRK07777 aminotransferase; Val 100.0 1.3E-48 2.9E-53 402.1 40.2 354 99-524 26-384 (387)
54 PRK05764 aspartate aminotransf 100.0 1.5E-48 3.4E-53 402.8 40.7 388 61-527 4-392 (393)
55 PRK09275 aspartate aminotransf 100.0 3E-49 6.6E-54 410.6 33.8 363 97-532 100-523 (527)
56 PRK09082 methionine aminotrans 100.0 1.1E-48 2.5E-53 402.1 37.2 351 99-522 32-385 (386)
57 PRK08175 aminotransferase; Val 100.0 5E-48 1.1E-52 398.6 40.8 357 99-526 31-389 (395)
58 TIGR03537 DapC succinyldiamino 100.0 6E-48 1.3E-52 391.7 38.5 343 99-522 2-349 (350)
59 PTZ00376 aspartate aminotransf 100.0 2.7E-48 5.9E-53 401.4 36.5 324 160-526 65-403 (404)
60 PRK15481 transcriptional regul 100.0 6.7E-48 1.5E-52 402.0 36.7 326 142-525 101-430 (431)
61 COG1168 MalY Bifunctional PLP- 100.0 2.2E-47 4.7E-52 364.4 36.0 358 98-527 26-387 (388)
62 PRK09257 aromatic amino acid a 100.0 1E-47 2.3E-52 396.3 35.7 338 142-524 47-396 (396)
63 TIGR03801 asp_4_decarbox aspar 100.0 3.1E-47 6.8E-52 395.0 33.8 362 97-531 94-521 (521)
64 PLN02397 aspartate transaminas 100.0 2.7E-46 5.8E-51 387.5 39.9 321 160-525 84-420 (423)
65 TIGR03542 DAPAT_plant LL-diami 100.0 8E-46 1.7E-50 382.9 39.1 376 62-523 4-401 (402)
66 PRK07865 N-succinyldiaminopime 100.0 1.5E-45 3.2E-50 376.4 37.1 332 99-521 29-363 (364)
67 TIGR03539 DapC_actino succinyl 100.0 3.2E-45 6.9E-50 372.6 36.4 352 69-520 2-356 (357)
68 PF00155 Aminotran_1_2: Aminot 100.0 4.7E-46 1E-50 380.4 29.9 357 99-520 3-363 (363)
69 PRK06836 aspartate aminotransf 100.0 2E-44 4.3E-49 371.5 42.0 344 99-527 35-392 (394)
70 PRK09440 avtA valine--pyruvate 100.0 1.1E-44 2.3E-49 376.7 36.7 327 160-530 67-415 (416)
71 PLN02672 methionine S-methyltr 100.0 1.1E-44 2.4E-49 397.2 38.4 371 98-525 698-1079(1082)
72 PRK08637 hypothetical protein; 100.0 2.4E-44 5.1E-49 370.2 37.0 332 159-527 36-387 (388)
73 PRK14809 histidinol-phosphate 100.0 1.4E-44 3.1E-49 368.1 34.7 342 73-525 15-356 (357)
74 PRK06358 threonine-phosphate d 100.0 2.5E-44 5.5E-49 365.2 35.8 320 141-524 34-353 (354)
75 PRK02610 histidinol-phosphate 100.0 2.7E-44 5.8E-49 367.9 36.2 340 99-527 30-372 (374)
76 COG1448 TyrB Aspartate/tyrosin 100.0 1.8E-44 4E-49 344.4 31.0 377 65-523 2-395 (396)
77 KOG0256 1-aminocyclopropane-1- 100.0 1.6E-43 3.4E-48 337.8 34.1 347 160-529 114-464 (471)
78 PRK01533 histidinol-phosphate 100.0 2.5E-44 5.5E-49 366.0 29.4 332 99-533 31-362 (366)
79 PRK08056 threonine-phosphate d 100.0 2.9E-43 6.3E-48 358.0 35.5 347 76-525 8-354 (356)
80 PRK03317 histidinol-phosphate 100.0 4.7E-43 1E-47 358.4 34.6 337 99-526 28-364 (368)
81 PRK06225 aspartate aminotransf 100.0 2.4E-42 5.1E-47 354.8 39.9 335 141-529 43-379 (380)
82 PRK07392 threonine-phosphate d 100.0 1.2E-42 2.5E-47 354.3 35.8 317 141-523 37-356 (360)
83 PLN03026 histidinol-phosphate 100.0 1.6E-42 3.4E-47 355.1 34.6 312 141-522 67-378 (380)
84 PRK03158 histidinol-phosphate 100.0 9.8E-43 2.1E-47 355.1 31.5 328 99-523 31-358 (359)
85 PRK04870 histidinol-phosphate 100.0 1.8E-42 3.9E-47 352.7 31.8 327 99-523 28-355 (356)
86 PRK05166 histidinol-phosphate 100.0 1.1E-41 2.3E-46 348.5 34.6 318 141-523 51-368 (371)
87 PRK08153 histidinol-phosphate 100.0 1.1E-41 2.5E-46 347.7 33.8 333 99-528 34-367 (369)
88 PRK09105 putative aminotransfe 100.0 2.1E-41 4.4E-46 345.4 33.9 326 97-524 43-368 (370)
89 KOG1411 Aspartate aminotransfe 100.0 4.7E-42 1E-46 320.4 24.2 384 62-525 25-424 (427)
90 COG0079 HisC Histidinol-phosph 100.0 4.9E-41 1.1E-45 336.0 33.4 326 132-526 28-354 (356)
91 PRK07908 hypothetical protein; 100.0 1.3E-40 2.9E-45 337.8 37.0 324 98-525 23-346 (349)
92 PRK05387 histidinol-phosphate 100.0 4.1E-41 9E-46 342.5 33.0 325 99-525 26-352 (353)
93 PRK02731 histidinol-phosphate 100.0 1.2E-40 2.7E-45 340.7 34.3 319 141-525 47-365 (367)
94 PRK04781 histidinol-phosphate 100.0 1.1E-40 2.3E-45 339.8 31.7 306 160-523 53-360 (364)
95 PRK14807 histidinol-phosphate 100.0 3.4E-40 7.3E-45 334.9 35.2 314 141-524 37-350 (351)
96 PRK06425 histidinol-phosphate 100.0 2.1E-40 4.5E-45 333.7 31.3 298 160-524 34-331 (332)
97 KOG0634 Aromatic amino acid am 100.0 2.7E-40 5.8E-45 318.4 30.5 353 160-530 93-470 (472)
98 KOG1412 Aspartate aminotransfe 100.0 6.2E-40 1.3E-44 302.0 30.5 385 65-528 6-407 (410)
99 TIGR01141 hisC histidinol-phos 100.0 6.4E-40 1.4E-44 332.8 31.0 326 98-520 20-345 (346)
100 PRK01688 histidinol-phosphate 100.0 2.5E-40 5.4E-45 335.5 26.5 299 160-520 51-350 (351)
101 PRK00950 histidinol-phosphate 100.0 1.9E-39 4.1E-44 331.3 32.9 324 99-524 36-360 (361)
102 PRK03321 putative aminotransfe 100.0 5.7E-39 1.2E-43 326.5 29.5 327 99-525 24-350 (352)
103 PRK14808 histidinol-phosphate 100.0 2E-38 4.4E-43 319.1 32.3 314 98-522 20-333 (335)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.7E-38 3.8E-43 319.4 30.6 289 160-520 41-329 (330)
105 PRK04635 histidinol-phosphate 100.0 2E-38 4.3E-43 322.3 29.9 297 160-522 54-351 (354)
106 PRK03967 histidinol-phosphate 100.0 4.1E-38 8.8E-43 317.6 31.9 301 141-525 33-333 (337)
107 PRK06959 putative threonine-ph 100.0 4E-38 8.7E-43 317.3 31.6 287 161-529 49-336 (339)
108 PRK05664 threonine-phosphate d 100.0 1.1E-37 2.4E-42 313.5 32.7 280 162-525 46-327 (330)
109 PRK08354 putative aminotransfe 100.0 3.4E-37 7.4E-42 307.5 32.7 287 141-522 22-308 (311)
110 PRK13238 tnaA tryptophanase/L- 100.0 1.1E-35 2.5E-40 308.4 36.6 378 64-525 12-432 (460)
111 COG3977 Alanine-alpha-ketoisov 100.0 1.2E-35 2.6E-40 272.5 29.5 388 72-530 5-415 (417)
112 cd00609 AAT_like Aspartate ami 100.0 5.3E-34 1.1E-38 289.6 37.5 335 141-521 13-349 (350)
113 PRK06939 2-amino-3-ketobutyrat 100.0 5.7E-31 1.2E-35 272.4 34.4 331 141-527 58-394 (397)
114 PLN02822 serine palmitoyltrans 100.0 2.6E-30 5.7E-35 270.7 36.0 342 141-529 125-480 (481)
115 TIGR00858 bioF 8-amino-7-oxono 100.0 2.4E-30 5.2E-35 264.1 33.3 320 141-521 32-360 (360)
116 TIGR03576 pyridox_MJ0158 pyrid 100.0 7.2E-30 1.6E-34 256.7 35.1 304 141-524 35-345 (346)
117 cd00617 Tnase_like Tryptophana 100.0 5.2E-30 1.1E-34 262.4 33.7 362 79-526 2-408 (431)
118 TIGR01822 2am3keto_CoA 2-amino 100.0 9.1E-30 2E-34 263.0 35.7 324 141-527 54-390 (393)
119 KOG0633 Histidinol phosphate a 100.0 6.3E-31 1.4E-35 237.0 22.2 308 161-523 64-374 (375)
120 PRK02627 acetylornithine amino 100.0 7.3E-31 1.6E-35 271.4 25.8 351 76-527 24-395 (396)
121 PRK01278 argD acetylornithine 100.0 1.7E-30 3.6E-35 267.7 27.1 322 141-526 49-388 (389)
122 TIGR01825 gly_Cac_T_rel pyrido 100.0 4.3E-29 9.3E-34 257.3 35.6 327 141-526 49-381 (385)
123 TIGR00707 argD acetylornithine 100.0 1.2E-29 2.6E-34 260.8 25.4 315 141-523 45-378 (379)
124 PRK03244 argD acetylornithine 100.0 2.5E-29 5.5E-34 259.8 27.5 323 141-528 61-396 (398)
125 COG4992 ArgD Ornithine/acetylo 100.0 1E-29 2.2E-34 248.0 22.4 362 70-530 21-402 (404)
126 PRK05958 8-amino-7-oxononanoat 100.0 3.8E-28 8.2E-33 250.3 34.8 326 141-524 55-385 (385)
127 TIGR03392 FeS_syn_CsdA cystein 100.0 4.3E-28 9.4E-33 250.7 34.7 324 141-527 29-396 (398)
128 PRK10874 cysteine sulfinate de 100.0 4.9E-28 1.1E-32 250.6 34.3 325 141-527 32-399 (401)
129 PRK04073 rocD ornithine--oxo-a 100.0 1.3E-28 2.8E-33 254.0 27.0 343 76-524 25-395 (396)
130 PRK10534 L-threonine aldolase; 100.0 3.4E-28 7.4E-33 245.5 27.1 312 140-525 12-332 (333)
131 cd06454 KBL_like KBL_like; thi 100.0 3.1E-27 6.6E-32 240.2 34.2 323 141-523 17-348 (349)
132 TIGR00713 hemL glutamate-1-sem 100.0 1.3E-28 2.8E-33 256.3 22.1 368 76-526 33-422 (423)
133 cd00378 SHMT Serine-glycine hy 100.0 6.1E-27 1.3E-31 242.6 34.5 330 141-526 32-385 (402)
134 PF12897 Aminotran_MocR: Alani 100.0 1E-26 2.2E-31 223.2 31.9 328 159-528 60-417 (425)
135 PRK13392 5-aminolevulinate syn 100.0 4.7E-27 1E-31 243.7 32.2 328 141-527 62-398 (410)
136 COG0001 HemL Glutamate-1-semia 100.0 5E-28 1.1E-32 238.7 23.5 389 49-529 10-431 (432)
137 cd00610 OAT_like Acetyl ornith 100.0 8.9E-28 1.9E-32 249.9 26.7 332 141-524 54-413 (413)
138 PLN02721 threonine aldolase 100.0 6E-27 1.3E-31 238.5 32.0 322 141-526 19-352 (353)
139 PRK02936 argD acetylornithine 100.0 5.9E-27 1.3E-31 240.5 32.0 316 141-524 47-377 (377)
140 PLN02483 serine palmitoyltrans 100.0 1.6E-26 3.4E-31 242.8 35.1 315 159-529 138-469 (489)
141 PRK12381 bifunctional succinyl 100.0 2.5E-27 5.3E-32 244.9 27.9 360 76-532 24-405 (406)
142 PRK05093 argD bifunctional N-s 100.0 3E-27 6.4E-32 244.4 28.1 349 76-527 25-401 (403)
143 KOG1402 Ornithine aminotransfe 100.0 1.2E-28 2.6E-33 229.4 15.1 359 64-525 32-426 (427)
144 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 4.6E-26 9.9E-31 232.8 35.0 301 169-526 53-368 (370)
145 TIGR01979 sufS cysteine desulf 100.0 2.7E-26 5.9E-31 237.8 32.8 323 141-527 31-402 (403)
146 PRK07179 hypothetical protein; 100.0 7.5E-26 1.6E-30 234.5 35.6 322 141-527 70-399 (407)
147 cd06502 TA_like Low-specificit 100.0 1.5E-26 3.4E-31 234.0 29.4 319 137-522 7-337 (338)
148 PRK07049 methionine gamma-lyas 100.0 6.5E-26 1.4E-30 234.1 33.8 230 161-440 78-315 (427)
149 PRK08088 4-aminobutyrate amino 100.0 1.1E-26 2.5E-31 241.1 27.1 376 76-527 26-424 (425)
150 PRK00854 rocD ornithine--oxo-a 100.0 3.6E-26 7.7E-31 236.6 29.4 314 141-525 59-400 (401)
151 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.5E-25 3.1E-30 231.9 33.8 326 141-520 30-397 (397)
152 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.1E-25 6.7E-30 226.3 35.4 330 140-524 13-360 (361)
153 PRK09295 bifunctional cysteine 100.0 1.3E-25 2.9E-30 232.6 33.1 323 141-525 36-403 (406)
154 TIGR03246 arg_catab_astC succi 100.0 3.5E-26 7.5E-31 235.6 28.4 349 76-527 20-396 (397)
155 PLN00144 acetylornithine trans 100.0 2.1E-26 4.5E-31 235.4 26.1 325 141-527 33-381 (382)
156 PRK06777 4-aminobutyrate amino 100.0 1.9E-26 4.2E-31 238.5 26.1 367 76-525 25-420 (421)
157 TIGR01821 5aminolev_synth 5-am 100.0 2.9E-25 6.4E-30 229.7 34.7 328 141-527 61-397 (402)
158 cd00613 GDC-P Glycine cleavage 100.0 9.5E-26 2.1E-30 233.4 30.6 344 76-520 4-398 (398)
159 PRK06918 4-aminobutyrate amino 99.9 1.2E-25 2.7E-30 234.7 30.8 374 76-530 39-447 (451)
160 PLN02855 Bifunctional selenocy 99.9 2.2E-25 4.7E-30 232.3 32.4 324 141-528 45-420 (424)
161 PRK09064 5-aminolevulinate syn 99.9 5.3E-25 1.2E-29 228.3 35.1 328 141-527 62-398 (407)
162 PLN02624 ornithine-delta-amino 99.9 6.4E-26 1.4E-30 237.5 28.1 363 75-528 59-446 (474)
163 cd06451 AGAT_like Alanine-glyo 99.9 2.4E-25 5.1E-30 227.0 31.5 319 140-525 10-356 (356)
164 PTZ00125 ornithine aminotransf 99.9 1.2E-25 2.7E-30 232.6 29.0 326 141-528 49-397 (400)
165 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 6.6E-25 1.4E-29 223.5 33.6 295 169-523 33-354 (355)
166 PRK08247 cystathionine gamma-s 99.9 3.6E-25 7.8E-30 225.3 31.0 301 160-526 46-364 (366)
167 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.8E-25 4E-30 231.6 28.9 369 76-525 18-419 (420)
168 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.2E-24 4.7E-29 221.8 36.5 332 141-527 33-382 (387)
169 PRK02948 cysteine desulfurase; 99.9 1.4E-25 3.1E-30 230.6 27.2 328 141-529 13-377 (381)
170 PRK13393 5-aminolevulinate syn 99.9 3.6E-24 7.8E-29 221.7 36.3 327 141-527 61-397 (406)
171 TIGR03403 nifS_epsilon cystein 99.9 7.8E-25 1.7E-29 225.2 31.1 329 141-529 12-378 (382)
172 TIGR02326 transamin_PhnW 2-ami 99.9 2E-24 4.3E-29 220.6 33.3 295 170-524 38-360 (363)
173 PRK06058 4-aminobutyrate amino 99.9 5.5E-25 1.2E-29 229.1 27.6 373 75-526 40-442 (443)
174 PRK13479 2-aminoethylphosphona 99.9 4.3E-24 9.3E-29 218.6 33.8 299 169-527 39-364 (368)
175 PRK04260 acetylornithine amino 99.9 3.9E-25 8.5E-30 226.6 26.1 314 141-523 46-374 (375)
176 PRK09792 4-aminobutyrate trans 99.9 1.8E-24 3.9E-29 223.8 31.2 368 76-525 25-420 (421)
177 PLN02409 serine--glyoxylate am 99.9 3.8E-24 8.2E-29 220.8 33.4 309 167-527 38-373 (401)
178 PRK04612 argD acetylornithine 99.9 9.2E-25 2E-29 224.5 28.7 359 75-529 24-406 (408)
179 PLN02242 methionine gamma-lyas 99.9 3E-24 6.5E-29 220.9 31.8 216 169-442 78-302 (418)
180 cd06453 SufS_like Cysteine des 99.9 1.6E-24 3.5E-29 222.3 29.4 316 141-520 12-373 (373)
181 TIGR03402 FeS_nifS cysteine de 99.9 3.6E-24 7.7E-29 220.1 31.7 323 141-529 12-375 (379)
182 COG0160 GabT 4-aminobutyrate a 99.9 2.6E-24 5.7E-29 216.7 29.7 375 75-527 40-446 (447)
183 PRK08360 4-aminobutyrate amino 99.9 3.2E-24 6.8E-29 222.6 30.9 372 76-529 26-429 (443)
184 PRK00451 glycine dehydrogenase 99.9 4.1E-24 8.9E-29 224.2 29.7 293 171-524 109-446 (447)
185 PRK07495 4-aminobutyrate amino 99.9 3.8E-24 8.2E-29 221.1 28.3 372 76-528 25-423 (425)
186 TIGR01437 selA_rel uncharacter 99.9 1.6E-23 3.5E-28 212.8 31.5 306 141-524 26-363 (363)
187 PRK09264 diaminobutyrate--2-ox 99.9 1.2E-23 2.6E-28 218.1 30.4 372 76-530 24-420 (425)
188 TIGR02407 ectoine_ectB diamino 99.9 7.3E-24 1.6E-28 218.6 28.4 367 76-526 20-412 (412)
189 TIGR01977 am_tr_V_EF2568 cyste 99.9 2.2E-23 4.7E-28 214.1 31.4 322 141-522 13-375 (376)
190 PRK06460 hypothetical protein; 99.9 3.5E-23 7.6E-28 211.0 31.8 215 167-439 45-264 (376)
191 PRK00062 glutamate-1-semialdeh 99.9 1.8E-24 3.9E-29 224.4 22.6 360 77-527 36-425 (426)
192 PRK06234 methionine gamma-lyas 99.9 6.3E-23 1.4E-27 210.9 33.2 218 163-439 58-287 (400)
193 cd06450 DOPA_deC_like DOPA dec 99.9 9.9E-24 2.2E-28 214.1 27.0 300 161-522 28-344 (345)
194 TIGR02080 O_succ_thio_ly O-suc 99.9 4.4E-23 9.5E-28 210.4 31.6 223 160-440 45-272 (382)
195 PRK08045 cystathionine gamma-s 99.9 7.4E-23 1.6E-27 208.8 32.6 223 160-440 46-273 (386)
196 TIGR00709 dat 2,4-diaminobutyr 99.9 8.2E-23 1.8E-27 212.6 32.4 383 76-531 24-440 (442)
197 PLN03227 serine palmitoyltrans 99.9 2.7E-22 5.9E-27 205.8 35.2 339 141-532 14-388 (392)
198 PRK13520 L-tyrosine decarboxyl 99.9 2.4E-22 5.1E-27 206.1 34.2 323 141-525 33-370 (371)
199 TIGR01885 Orn_aminotrans ornit 99.9 1.5E-22 3.2E-27 209.3 32.9 318 141-524 55-400 (401)
200 PRK08133 O-succinylhomoserine 99.9 1.5E-22 3.3E-27 207.3 32.0 213 169-440 63-281 (390)
201 PRK03715 argD acetylornithine 99.9 5.1E-23 1.1E-27 211.0 27.4 320 141-527 54-394 (395)
202 PLN02482 glutamate-1-semialdeh 99.9 1.1E-23 2.3E-28 219.1 22.6 391 51-526 58-473 (474)
203 TIGR02006 IscS cysteine desulf 99.9 1.2E-22 2.6E-27 210.1 30.0 320 141-528 16-379 (402)
204 COG0520 csdA Selenocysteine ly 99.9 5.5E-22 1.2E-26 202.0 34.0 324 141-525 35-404 (405)
205 PRK05964 adenosylmethionine--8 99.9 8.3E-23 1.8E-27 212.2 28.4 362 76-526 27-422 (423)
206 PRK06767 methionine gamma-lyas 99.9 2.4E-22 5.3E-27 205.9 31.4 291 161-526 56-385 (386)
207 PRK08117 4-aminobutyrate amino 99.9 3.7E-22 8E-27 207.9 33.0 339 141-529 61-432 (433)
208 PRK08249 cystathionine gamma-s 99.9 2.9E-22 6.3E-27 205.3 31.1 213 169-440 66-284 (398)
209 PRK08776 cystathionine gamma-s 99.9 5.3E-22 1.1E-26 203.7 32.9 221 162-440 56-281 (405)
210 PRK08861 cystathionine gamma-s 99.9 6.5E-22 1.4E-26 201.3 32.4 222 160-439 47-273 (388)
211 PRK07505 hypothetical protein; 99.9 1.1E-22 2.4E-27 210.4 27.1 322 141-526 62-399 (402)
212 PRK00011 glyA serine hydroxyme 99.9 1.5E-21 3.3E-26 203.0 35.6 331 141-526 38-389 (416)
213 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.3E-21 2.8E-26 200.8 33.9 317 142-522 34-372 (373)
214 PRK07582 cystathionine gamma-l 99.9 6.1E-22 1.3E-26 201.3 30.1 285 160-526 45-365 (366)
215 TIGR03372 putres_am_tran putre 99.9 6E-22 1.3E-26 204.5 30.4 328 141-524 93-442 (442)
216 PRK07503 methionine gamma-lyas 99.9 9.3E-22 2E-26 202.3 31.6 213 169-440 67-287 (403)
217 PRK07504 O-succinylhomoserine 99.9 6.9E-22 1.5E-26 202.9 30.5 221 161-440 60-286 (398)
218 PRK11522 putrescine--2-oxoglut 99.9 1E-21 2.3E-26 204.1 31.7 367 76-530 66-455 (459)
219 PLN02760 4-aminobutyrate:pyruv 99.9 9.5E-22 2.1E-26 206.3 31.5 371 76-529 74-494 (504)
220 PRK08593 4-aminobutyrate amino 99.9 7.8E-22 1.7E-26 205.1 30.4 373 76-530 27-433 (445)
221 cd00614 CGS_like CGS_like: Cys 99.9 7.4E-22 1.6E-26 201.4 29.7 215 167-440 40-261 (369)
222 PRK14012 cysteine desulfurase; 99.9 3.9E-22 8.5E-27 206.5 28.1 321 141-528 16-381 (404)
223 PRK06541 hypothetical protein; 99.9 6.6E-22 1.4E-26 206.1 29.6 373 76-529 37-458 (460)
224 PRK07482 hypothetical protein; 99.9 9.3E-22 2E-26 205.2 29.7 373 76-530 35-458 (461)
225 TIGR01328 met_gam_lyase methio 99.9 1.3E-21 2.8E-26 200.3 30.2 220 161-440 54-281 (391)
226 PRK07810 O-succinylhomoserine 99.9 1.5E-21 3.3E-26 200.4 30.7 221 161-441 65-292 (403)
227 PRK07050 cystathionine beta-ly 99.9 1.7E-21 3.8E-26 199.5 30.8 297 160-527 59-392 (394)
228 PRK07811 cystathionine gamma-s 99.9 2.7E-21 6E-26 197.9 32.3 218 166-440 60-282 (388)
229 PRK06938 diaminobutyrate--2-ox 99.9 1.6E-21 3.4E-26 203.3 30.7 380 75-528 47-462 (464)
230 PRK05965 hypothetical protein; 99.9 1.1E-21 2.4E-26 204.5 29.7 370 76-528 31-449 (459)
231 TIGR01325 O_suc_HS_sulf O-succ 99.9 2.5E-21 5.4E-26 198.0 31.4 220 161-440 49-274 (380)
232 PRK05769 4-aminobutyrate amino 99.9 1.6E-21 3.5E-26 202.5 29.3 369 76-527 39-440 (441)
233 PRK06943 adenosylmethionine--8 99.9 2.6E-21 5.7E-26 201.2 29.7 367 76-530 39-450 (453)
234 PRK05639 4-aminobutyrate amino 99.9 3E-21 6.6E-26 200.8 29.8 372 76-528 38-445 (457)
235 PRK06062 hypothetical protein; 99.9 2.8E-21 6.1E-26 201.1 29.4 368 76-529 38-448 (451)
236 PRK07046 aminotransferase; Val 99.9 6E-22 1.3E-26 205.8 24.2 366 73-528 57-452 (453)
237 TIGR03235 DNA_S_dndA cysteine 99.9 3.3E-22 7.2E-27 203.5 21.7 311 141-514 11-346 (353)
238 PRK06917 hypothetical protein; 99.9 7.5E-21 1.6E-25 197.7 31.3 378 76-530 16-441 (447)
239 PRK07269 cystathionine gamma-s 99.9 2.2E-21 4.8E-26 196.4 26.6 302 161-525 49-363 (364)
240 PRK12389 glutamate-1-semialdeh 99.9 9E-22 2E-26 204.1 24.1 365 76-526 38-427 (428)
241 PRK09028 cystathionine beta-ly 99.9 9.4E-21 2E-25 192.5 31.0 221 161-439 53-280 (394)
242 PRK04013 argD acetylornithine/ 99.9 1.1E-21 2.3E-26 198.0 23.5 304 141-528 42-362 (364)
243 COG1104 NifS Cysteine sulfinat 99.9 4.2E-21 9.1E-26 188.3 26.7 324 141-529 14-380 (386)
244 PRK07678 aminotransferase; Val 99.9 4.1E-21 8.8E-26 200.1 28.2 372 76-527 32-450 (451)
245 COG0156 BioF 7-keto-8-aminopel 99.9 5.9E-20 1.3E-24 183.6 35.0 325 141-523 55-387 (388)
246 PRK05968 hypothetical protein; 99.9 1E-20 2.2E-25 193.8 30.2 284 169-527 65-387 (389)
247 PRK00615 glutamate-1-semialdeh 99.9 7.6E-22 1.6E-26 203.6 21.9 372 72-528 34-430 (433)
248 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.6E-20 5.5E-25 189.8 32.2 193 141-381 10-208 (376)
249 PRK06931 diaminobutyrate--2-ox 99.9 2E-20 4.4E-25 194.9 31.9 380 76-529 43-457 (459)
250 PRK08574 cystathionine gamma-s 99.9 2.1E-20 4.5E-25 191.0 30.8 215 168-440 54-273 (385)
251 PRK07480 putative aminotransfe 99.9 6.1E-21 1.3E-25 198.6 27.1 374 76-532 35-454 (456)
252 PRK07030 adenosylmethionine--8 99.9 1.3E-20 2.7E-25 196.6 29.1 365 77-527 33-447 (466)
253 PRK07483 hypothetical protein; 99.9 8.7E-21 1.9E-25 197.0 27.8 375 76-529 15-440 (443)
254 PRK06082 4-aminobutyrate amino 99.9 1.1E-20 2.4E-25 196.9 28.5 369 75-531 56-456 (459)
255 PRK07481 hypothetical protein; 99.9 3.2E-20 7E-25 193.2 32.0 369 76-527 27-446 (449)
256 PRK13360 omega amino acid--pyr 99.9 1.4E-20 3.1E-25 195.3 28.3 365 76-527 31-441 (442)
257 PRK08742 adenosylmethionine--8 99.9 1.4E-20 3E-25 196.2 28.1 370 76-528 49-469 (472)
258 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3E-20 6.5E-25 190.2 30.1 193 141-380 13-207 (379)
259 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 2.2E-20 4.7E-25 193.2 29.3 162 161-365 52-217 (418)
260 PRK06916 adenosylmethionine--8 99.9 2.1E-20 4.6E-25 195.0 29.1 367 76-528 41-457 (460)
261 TIGR01324 cysta_beta_ly_B cyst 99.9 7.5E-20 1.6E-24 186.0 32.3 213 169-439 52-269 (377)
262 PRK08064 cystathionine beta-ly 99.9 4.4E-20 9.6E-25 189.2 30.8 212 169-438 56-272 (390)
263 PRK06105 aminotransferase; Pro 99.9 1.5E-20 3.3E-25 196.1 27.7 371 76-530 33-453 (460)
264 PRK07986 adenosylmethionine--8 99.9 3.4E-20 7.3E-25 191.3 29.7 357 77-526 29-423 (428)
265 PRK09221 beta alanine--pyruvat 99.9 4.6E-20 1E-24 191.7 30.7 365 76-527 34-444 (445)
266 PRK05630 adenosylmethionine--8 99.9 1.4E-20 3E-25 194.3 26.3 353 76-526 25-420 (422)
267 PRK07036 hypothetical protein; 99.9 3.8E-20 8.1E-25 193.3 29.4 372 76-530 36-456 (466)
268 PRK06173 adenosylmethionine--8 99.9 1.3E-20 2.7E-25 194.8 25.4 358 77-528 30-427 (429)
269 PLN02509 cystathionine beta-ly 99.9 1.4E-19 2.9E-24 187.3 32.7 225 160-440 124-353 (464)
270 PLN02955 8-amino-7-oxononanoat 99.9 2.4E-19 5.1E-24 183.3 33.7 320 141-528 118-463 (476)
271 PRK05967 cystathionine beta-ly 99.9 1.8E-19 4E-24 182.7 31.5 223 161-439 56-283 (395)
272 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.5E-19 3.3E-24 183.9 30.9 289 167-521 18-352 (352)
273 PLN02651 cysteine desulfurase 99.9 8.1E-20 1.8E-24 186.6 28.2 310 140-514 11-364 (364)
274 PRK05937 8-amino-7-oxononanoat 99.9 4.6E-19 1E-23 181.2 33.6 317 141-528 20-352 (370)
275 TIGR01329 cysta_beta_ly_E cyst 99.9 1.2E-19 2.6E-24 185.2 29.1 284 169-526 49-375 (378)
276 PRK12403 putative aminotransfe 99.9 2.6E-19 5.6E-24 186.9 31.3 371 76-529 39-455 (460)
277 PRK06148 hypothetical protein; 99.9 5.6E-20 1.2E-24 207.8 27.5 371 75-527 608-1011(1013)
278 PRK07671 cystathionine beta-ly 99.9 4.3E-19 9.4E-24 180.9 31.4 213 169-439 52-269 (377)
279 COG0075 Serine-pyruvate aminot 99.9 9.2E-19 2E-23 173.3 31.9 303 169-527 36-364 (383)
280 PRK08248 O-acetylhomoserine am 99.9 4.9E-19 1.1E-23 182.9 31.4 155 169-365 66-224 (431)
281 PRK04366 glycine dehydrogenase 99.9 2.4E-19 5.1E-24 188.6 29.2 333 141-529 83-451 (481)
282 PRK05939 hypothetical protein; 99.9 5E-19 1.1E-23 181.2 30.4 154 169-365 49-206 (397)
283 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 6.6E-19 1.4E-23 180.3 31.2 194 141-380 10-206 (375)
284 PRK06084 O-acetylhomoserine am 99.9 6.4E-19 1.4E-23 181.9 31.1 155 169-365 60-218 (425)
285 COG0161 BioA Adenosylmethionin 99.9 7.8E-20 1.7E-24 183.2 23.2 338 141-530 62-447 (449)
286 PRK06702 O-acetylhomoserine am 99.9 2.5E-19 5.4E-24 183.7 27.1 216 169-440 63-314 (432)
287 PF00266 Aminotran_5: Aminotra 99.9 6.1E-19 1.3E-23 180.7 30.0 313 140-516 11-371 (371)
288 TIGR03588 PseC UDP-4-keto-6-de 99.8 2.2E-18 4.8E-23 177.0 32.7 317 141-524 9-380 (380)
289 PRK06176 cystathionine gamma-s 99.8 1.5E-18 3.2E-23 177.0 30.7 212 169-439 52-269 (380)
290 KOG1404 Alanine-glyoxylate ami 99.8 3.5E-19 7.5E-24 170.6 23.9 334 141-526 68-437 (442)
291 TIGR01814 kynureninase kynuren 99.8 1.6E-18 3.5E-23 179.6 30.8 318 141-524 40-405 (406)
292 TIGR00508 bioA adenosylmethion 99.8 9.2E-19 2E-23 181.3 28.4 324 141-526 63-426 (427)
293 cd00615 Orn_deC_like Ornithine 99.8 1.4E-19 3.1E-24 178.9 20.6 226 169-434 61-293 (294)
294 PRK06149 hypothetical protein; 99.8 7.9E-19 1.7E-23 198.6 29.2 337 141-526 601-970 (972)
295 PRK08297 L-lysine aminotransfe 99.8 1.6E-18 3.4E-23 180.1 26.4 356 77-527 30-442 (443)
296 PRK06209 glutamate-1-semialdeh 99.8 5.1E-19 1.1E-23 183.6 21.9 346 76-529 33-408 (431)
297 PRK05994 O-acetylhomoserine am 99.8 1.1E-17 2.5E-22 173.1 31.3 155 169-365 65-223 (427)
298 KOG1401 Acetylornithine aminot 99.8 1.4E-18 3E-23 167.9 22.2 370 75-528 40-432 (433)
299 PRK15407 lipopolysaccharide bi 99.8 5.8E-17 1.3E-21 168.0 35.8 194 141-380 43-246 (438)
300 TIGR00699 GABAtrns_euk 4-amino 99.8 6.3E-18 1.4E-22 174.9 25.5 356 75-524 42-464 (464)
301 KOG1549 Cysteine desulfurase N 99.8 8E-18 1.7E-22 165.8 22.8 190 141-365 56-255 (428)
302 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.4E-16 3.1E-21 161.2 30.4 215 169-440 57-278 (386)
303 PRK08134 O-acetylhomoserine am 99.8 1.4E-16 3.1E-21 164.5 31.0 155 169-365 66-224 (433)
304 COG2008 GLY1 Threonine aldolas 99.8 7.4E-17 1.6E-21 155.1 26.2 320 141-524 13-341 (342)
305 COG0399 WecE Predicted pyridox 99.8 3.6E-16 7.7E-21 155.3 31.8 316 141-526 14-373 (374)
306 PRK13580 serine hydroxymethylt 99.8 5.1E-16 1.1E-20 159.1 33.8 334 141-527 62-446 (493)
307 TIGR03251 LAT_fam L-lysine 6-t 99.8 3.5E-17 7.5E-22 170.0 25.4 358 72-522 18-430 (431)
308 PRK08114 cystathionine beta-ly 99.8 4.2E-16 9E-21 158.1 32.5 213 169-439 64-283 (395)
309 TIGR03531 selenium_SpcS O-phos 99.8 1.8E-16 3.8E-21 162.4 28.6 311 169-523 103-443 (444)
310 PRK13034 serine hydroxymethylt 99.8 6.1E-16 1.3E-20 160.0 32.8 324 141-526 41-392 (416)
311 PRK07812 O-acetylhomoserine am 99.8 3.4E-16 7.4E-21 161.5 30.8 216 169-439 71-320 (436)
312 PLN02974 adenosylmethionine-8- 99.8 4.6E-16 1E-20 170.1 32.2 338 141-524 384-816 (817)
313 PTZ00094 serine hydroxymethylt 99.8 1E-15 2.2E-20 160.4 32.9 326 141-526 47-408 (452)
314 PF04864 Alliinase_C: Allinase 99.8 2E-18 4.3E-23 164.4 11.0 299 169-523 45-362 (363)
315 PF00202 Aminotran_3: Aminotra 99.7 4.2E-17 9.1E-22 164.0 18.2 272 141-450 34-334 (339)
316 COG0626 MetC Cystathionine bet 99.7 4E-15 8.6E-20 148.7 31.7 216 169-440 65-286 (396)
317 cd01494 AAT_I Aspartate aminot 99.7 5.7E-17 1.2E-21 146.5 16.6 167 169-365 2-169 (170)
318 TIGR01364 serC_1 phosphoserine 99.7 2.1E-15 4.6E-20 152.1 29.0 315 141-526 4-348 (349)
319 KOG1368 Threonine aldolase [Am 99.7 1.1E-15 2.4E-20 141.4 24.2 315 142-521 36-363 (384)
320 PRK05613 O-acetylhomoserine am 99.7 3.2E-15 6.9E-20 154.4 29.9 216 169-439 71-325 (437)
321 PRK06434 cystathionine gamma-l 99.7 3E-15 6.5E-20 152.0 29.0 211 169-439 66-281 (384)
322 TIGR02618 tyr_phenol_ly tyrosi 99.7 4.2E-15 9.2E-20 150.2 29.4 325 161-526 65-426 (450)
323 KOG0053 Cystathionine beta-lya 99.7 5.4E-15 1.2E-19 145.7 29.2 187 169-398 79-270 (409)
324 PF01041 DegT_DnrJ_EryC1: DegT 99.7 1.9E-15 4.1E-20 154.0 27.1 281 142-491 5-310 (363)
325 PLN02724 Molybdenum cofactor s 99.7 4E-15 8.8E-20 165.6 31.8 309 169-524 80-486 (805)
326 PLN02880 tyrosine decarboxylas 99.7 5.4E-14 1.2E-18 147.6 36.4 329 162-530 113-488 (490)
327 cd00611 PSAT_like Phosphoserin 99.7 1.7E-15 3.7E-20 153.9 23.9 314 137-523 7-353 (355)
328 KOG1359 Glycine C-acetyltransf 99.7 8.6E-15 1.9E-19 135.2 25.8 322 141-527 83-413 (417)
329 TIGR01788 Glu-decarb-GAD gluta 99.7 2E-14 4.4E-19 148.1 31.1 341 141-527 54-430 (431)
330 PRK13237 tyrosine phenol-lyase 99.7 3.9E-14 8.5E-19 143.6 32.1 325 161-526 72-433 (460)
331 PLN02590 probable tyrosine dec 99.7 1.5E-13 3.3E-18 144.3 37.3 349 141-529 143-535 (539)
332 COG1103 Archaea-specific pyrid 99.7 1.9E-14 4.1E-19 131.6 25.3 306 169-527 63-381 (382)
333 PRK05355 3-phosphoserine/phosp 99.7 7.2E-15 1.6E-19 149.0 24.5 320 137-526 11-358 (360)
334 PRK02769 histidine decarboxyla 99.7 9.2E-14 2E-18 141.3 31.9 292 169-525 63-371 (380)
335 PLN03032 serine decarboxylase; 99.7 7.7E-14 1.7E-18 140.8 30.3 272 141-451 36-329 (374)
336 PRK03080 phosphoserine aminotr 99.7 3.9E-14 8.5E-19 145.1 28.2 316 137-529 20-376 (378)
337 KOG2862 Alanine-glyoxylate ami 99.7 1.7E-13 3.6E-18 128.0 27.7 312 160-526 40-382 (385)
338 PLN02414 glycine dehydrogenase 99.7 4.5E-14 9.8E-19 156.5 28.4 319 160-529 554-910 (993)
339 PLN03226 serine hydroxymethylt 99.6 5.3E-13 1.1E-17 139.5 33.0 331 141-526 47-419 (475)
340 PRK04311 selenocysteine syntha 99.6 7.6E-13 1.7E-17 137.2 33.6 330 140-525 98-463 (464)
341 COG2873 MET17 O-acetylhomoseri 99.6 4.3E-13 9.4E-18 128.6 27.1 231 169-441 64-316 (426)
342 PLN02271 serine hydroxymethylt 99.6 3.5E-12 7.7E-17 131.5 33.4 332 141-525 161-539 (586)
343 KOG1360 5-aminolevulinate synt 99.6 4.6E-13 9.9E-18 128.8 25.0 329 141-527 187-525 (570)
344 TIGR03799 NOD_PanD_pyr putativ 99.6 6.7E-12 1.4E-16 132.2 35.3 260 161-450 119-434 (522)
345 TIGR01366 serC_3 phosphoserine 99.6 2.2E-13 4.8E-18 138.4 22.6 313 137-526 11-360 (361)
346 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 4.7E-14 1E-18 142.3 17.3 240 169-444 68-328 (417)
347 TIGR00474 selA seryl-tRNA(sec) 99.6 7E-12 1.5E-16 129.7 33.5 198 141-377 94-309 (454)
348 PRK15029 arginine decarboxylas 99.6 5.8E-13 1.3E-17 143.9 26.0 177 169-365 207-399 (755)
349 PF00464 SHMT: Serine hydroxym 99.6 4.7E-12 1E-16 127.3 29.3 324 141-518 33-397 (399)
350 KOG1403 Predicted alanine-glyo 99.5 3.7E-13 8E-18 124.8 18.3 340 141-529 63-440 (452)
351 COG0112 GlyA Glycine/serine hy 99.5 7.2E-12 1.6E-16 121.6 27.5 331 141-526 39-390 (413)
352 PF01212 Beta_elim_lyase: Beta 99.5 9.7E-14 2.1E-18 135.4 13.4 256 141-443 8-276 (290)
353 PLN02263 serine decarboxylase 99.5 5.4E-11 1.2E-15 122.1 32.7 294 168-527 130-444 (470)
354 COG0076 GadB Glutamate decarbo 99.5 8.3E-12 1.8E-16 129.1 26.7 272 141-451 75-377 (460)
355 PRK13578 ornithine decarboxyla 99.5 8.4E-12 1.8E-16 133.6 27.5 180 165-365 171-368 (720)
356 PLN02452 phosphoserine transam 99.5 2.3E-11 4.9E-16 122.9 28.0 319 137-525 15-362 (365)
357 TIGR01365 serC_2 phosphoserine 99.5 1.1E-11 2.3E-16 125.3 25.0 317 144-525 19-372 (374)
358 PRK05367 glycine dehydrogenase 99.5 8.2E-11 1.8E-15 131.4 32.6 320 160-529 528-878 (954)
359 PRK15400 lysine decarboxylase 99.5 1E-11 2.2E-16 132.8 24.2 168 165-354 192-371 (714)
360 PRK12566 glycine dehydrogenase 99.5 3.5E-11 7.5E-16 131.3 27.5 318 160-529 529-879 (954)
361 TIGR00461 gcvP glycine dehydro 99.4 1.9E-10 4E-15 126.5 32.1 319 160-529 516-870 (939)
362 PRK15399 lysine decarboxylase 99.4 1.3E-10 2.8E-15 124.5 29.2 171 169-365 197-380 (713)
363 PRK12462 phosphoserine aminotr 99.4 7.7E-11 1.7E-15 117.8 25.8 319 137-531 12-363 (364)
364 KOG1357 Serine palmitoyltransf 99.3 3.9E-11 8.4E-16 117.7 16.4 299 169-524 184-500 (519)
365 PF00282 Pyridoxal_deC: Pyrido 99.3 1.5E-09 3.3E-14 110.3 28.3 279 141-449 52-368 (373)
366 TIGR02617 tnaA_trp_ase tryptop 99.3 3E-09 6.5E-14 107.0 28.7 327 161-526 68-441 (467)
367 PLN02414 glycine dehydrogenase 99.3 2.3E-09 5E-14 119.5 28.2 304 141-522 118-465 (993)
368 COG1982 LdcC Arginine/lysine/o 99.3 2E-09 4.2E-14 111.0 24.6 166 169-365 72-245 (557)
369 PRK05367 glycine dehydrogenase 99.2 1E-08 2.2E-13 114.8 28.0 282 166-521 116-437 (954)
370 PLN02994 1-aminocyclopropane-1 99.2 7.7E-11 1.7E-15 103.4 8.2 65 162-227 87-153 (153)
371 PF06838 Met_gamma_lyase: Meth 99.2 7.2E-08 1.6E-12 93.4 28.0 175 172-379 55-248 (403)
372 COG3033 TnaA Tryptophanase [Am 99.0 2.4E-07 5.2E-12 89.0 26.3 328 160-526 72-444 (471)
373 TIGR03811 tyr_de_CO2_Ent tyros 99.0 7E-07 1.5E-11 95.3 31.9 168 141-315 96-325 (608)
374 KOG1358 Serine palmitoyltransf 99.0 5.6E-08 1.2E-12 94.2 19.3 337 141-526 110-465 (467)
375 COG1921 SelA Selenocysteine sy 98.9 4.3E-07 9.3E-12 89.9 24.1 220 141-399 40-267 (395)
376 KOG1405 4-aminobutyrate aminot 98.9 4.1E-08 8.9E-13 93.8 16.1 221 253-526 254-483 (484)
377 COG3844 Kynureninase [Amino ac 98.9 2.3E-07 4.9E-12 88.1 21.0 283 172-528 81-404 (407)
378 KOG1383 Glutamate decarboxylas 98.9 5.6E-07 1.2E-11 89.5 22.4 308 168-530 117-450 (491)
379 TIGR00461 gcvP glycine dehydro 98.7 4.6E-06 1E-10 92.4 25.4 280 166-521 104-426 (939)
380 PF05889 SLA_LP_auto_ag: Solub 98.7 1.9E-06 4.1E-11 85.4 18.3 317 172-525 57-389 (389)
381 PF03841 SelA: L-seryl-tRNA se 98.6 4.3E-08 9.2E-13 96.2 6.3 263 141-436 19-296 (367)
382 COG1003 GcvP Glycine cleavage 98.6 2E-05 4.3E-10 78.1 23.6 140 160-314 95-245 (496)
383 COG4100 Cystathionine beta-lya 98.6 3.4E-06 7.3E-11 79.3 16.3 175 168-376 66-256 (416)
384 PF02347 GDC-P: Glycine cleava 98.5 1.3E-05 2.8E-10 81.5 20.9 220 166-436 105-364 (429)
385 KOG0628 Aromatic-L-amino-acid/ 98.5 0.00016 3.6E-09 72.2 27.0 147 165-317 107-279 (511)
386 COG1932 SerC Phosphoserine ami 98.4 0.00013 2.9E-09 71.2 24.0 320 137-525 13-362 (365)
387 KOG0629 Glutamate decarboxylas 98.4 0.0002 4.4E-09 70.8 25.0 333 160-523 130-506 (510)
388 COG0403 GcvP Glycine cleavage 98.4 0.00068 1.5E-08 67.5 28.1 266 191-522 138-446 (450)
389 KOG2467 Glycine/serine hydroxy 98.4 0.00037 8.1E-09 67.6 24.7 326 141-525 53-425 (477)
390 KOG3843 Predicted serine hydro 98.0 0.00027 5.8E-09 65.5 15.5 238 174-435 60-302 (432)
391 PRK12566 glycine dehydrogenase 97.9 0.0052 1.1E-07 68.5 24.6 232 215-521 168-439 (954)
392 KOG3846 L-kynurenine hydrolase 97.3 0.056 1.2E-06 51.7 19.8 132 169-314 113-255 (465)
393 KOG2790 Phosphoserine aminotra 97.0 0.053 1.2E-06 51.3 16.2 316 141-524 19-366 (370)
394 PLN02672 methionine S-methyltr 96.9 0.028 6E-07 64.2 16.5 219 146-391 408-639 (1082)
395 KOG2040 Glycine dehydrogenase 96.2 1.5 3.3E-05 46.4 21.9 141 160-312 568-719 (1001)
396 KOG2040 Glycine dehydrogenase 88.9 37 0.00081 36.6 22.0 87 199-309 192-282 (1001)
397 KOG1465 Translation initiation 87.9 16 0.00035 35.4 13.1 107 188-311 160-272 (353)
398 COG2102 Predicted ATPases of P 84.7 11 0.00024 35.0 10.1 100 193-308 4-117 (223)
399 COG1105 FruK Fructose-1-phosph 82.0 26 0.00057 34.5 12.2 59 249-310 108-166 (310)
400 PRK08265 short chain dehydroge 81.7 21 0.00046 34.1 11.8 100 191-296 7-107 (261)
401 PF05368 NmrA: NmrA-like famil 79.0 14 0.0003 34.7 9.3 96 193-307 1-98 (233)
402 TIGR00290 MJ0570_dom MJ0570-re 76.5 36 0.00077 32.0 10.9 100 193-308 4-116 (223)
403 PF00106 adh_short: short chai 73.4 31 0.00067 30.1 9.5 100 193-298 3-110 (167)
404 PF02662 FlpD: Methyl-viologen 70.7 19 0.0004 30.4 6.9 76 218-304 2-91 (124)
405 TIGR00289 conserved hypothetic 70.7 50 0.0011 31.0 10.4 100 193-308 4-116 (222)
406 COG1184 GCD2 Translation initi 70.4 72 0.0016 31.3 11.6 107 188-312 117-231 (301)
407 KOG1201 Hydroxysteroid 17-beta 68.5 78 0.0017 30.9 11.3 141 188-357 36-182 (300)
408 PRK12936 3-ketoacyl-(acyl-carr 66.8 87 0.0019 29.2 11.7 82 191-278 7-88 (245)
409 PRK06194 hypothetical protein; 64.4 1E+02 0.0023 29.6 12.0 81 191-277 7-90 (287)
410 COG4221 Short-chain alcohol de 64.4 83 0.0018 29.9 10.3 100 192-297 7-110 (246)
411 COG2984 ABC-type uncharacteriz 63.2 1.2E+02 0.0026 30.0 11.5 147 142-311 45-196 (322)
412 smart00642 Aamy Alpha-amylase 62.5 35 0.00076 30.4 7.4 60 253-314 17-94 (166)
413 KOG1467 Translation initiation 62.5 88 0.0019 32.6 10.7 150 143-313 305-472 (556)
414 TIGR03679 arCOG00187 arCOG0018 62.3 1.2E+02 0.0025 28.4 11.2 103 193-308 1-117 (218)
415 PRK10595 SOS cell division inh 61.8 1.2E+02 0.0025 27.0 10.3 101 192-306 30-137 (164)
416 PRK07067 sorbitol dehydrogenas 61.2 1.1E+02 0.0024 28.8 11.4 81 191-277 7-87 (257)
417 PRK06500 short chain dehydroge 61.2 1.2E+02 0.0026 28.3 11.5 81 191-277 7-87 (249)
418 PRK07063 short chain dehydroge 60.4 1.3E+02 0.0028 28.5 11.6 82 190-277 7-93 (260)
419 PF01902 ATP_bind_4: ATP-bindi 60.2 70 0.0015 29.9 9.2 100 193-308 4-116 (218)
420 PRK08589 short chain dehydroge 60.1 1.4E+02 0.003 28.6 11.9 97 191-295 7-110 (272)
421 PRK05872 short chain dehydroge 59.8 1.2E+02 0.0026 29.6 11.4 83 189-277 8-92 (296)
422 PRK07478 short chain dehydroge 59.5 1.3E+02 0.0028 28.3 11.5 81 191-277 7-90 (254)
423 PRK12481 2-deoxy-D-gluconate 3 59.5 1.1E+02 0.0024 28.9 11.0 82 191-279 9-91 (251)
424 PRK07523 gluconate 5-dehydroge 59.5 1.5E+02 0.0033 27.8 11.9 82 190-277 10-94 (255)
425 PRK05717 oxidoreductase; Valid 59.4 98 0.0021 29.2 10.6 81 191-277 11-91 (255)
426 PRK08535 translation initiatio 59.4 1.9E+02 0.0041 28.7 13.5 117 170-308 104-227 (310)
427 PRK05876 short chain dehydroge 59.3 1.3E+02 0.0029 28.9 11.6 99 191-296 7-111 (275)
428 PRK05678 succinyl-CoA syntheta 59.0 32 0.0007 33.7 7.0 72 223-312 52-125 (291)
429 PF05378 Hydant_A_N: Hydantoin 58.9 97 0.0021 27.8 9.6 46 251-303 130-176 (176)
430 PRK07024 short chain dehydroge 58.6 1.2E+02 0.0026 28.7 11.1 78 192-275 4-83 (257)
431 cd01994 Alpha_ANH_like_IV This 58.5 1.5E+02 0.0032 27.1 11.2 103 193-308 3-119 (194)
432 PRK05867 short chain dehydroge 58.1 1.5E+02 0.0033 27.9 11.6 81 191-277 10-93 (253)
433 PRK07231 fabG 3-ketoacyl-(acyl 57.4 1.4E+02 0.003 27.9 11.3 83 190-278 5-89 (251)
434 PRK06372 translation initiatio 57.0 1.8E+02 0.0039 27.9 11.4 99 191-308 87-190 (253)
435 PRK06483 dihydromonapterin red 56.8 1.5E+02 0.0033 27.4 11.3 76 192-275 4-79 (236)
436 PRK06935 2-deoxy-D-gluconate 3 56.8 1.5E+02 0.0032 28.0 11.4 81 190-277 15-98 (258)
437 TIGR00524 eIF-2B_rel eIF-2B al 56.7 2E+02 0.0043 28.4 12.2 118 172-309 104-237 (303)
438 cd02742 GH20_hexosaminidase Be 56.2 25 0.00053 34.8 5.8 70 228-308 21-90 (303)
439 cd06568 GH20_SpHex_like A subg 55.8 19 0.00042 36.0 5.0 72 228-309 23-94 (329)
440 PRK06841 short chain dehydroge 55.8 1.6E+02 0.0034 27.7 11.3 82 190-277 15-96 (255)
441 PRK08339 short chain dehydroge 55.6 1.6E+02 0.0034 28.1 11.3 99 191-297 9-114 (263)
442 PRK06139 short chain dehydroge 55.2 1.5E+02 0.0032 29.6 11.4 100 191-297 8-113 (330)
443 KOG1200 Mitochondrial/plastidi 54.5 76 0.0017 29.1 7.8 100 192-298 15-120 (256)
444 PRK08085 gluconate 5-dehydroge 54.5 1.9E+02 0.0041 27.2 11.7 102 190-297 9-115 (254)
445 PRK07097 gluconate 5-dehydroge 54.1 2E+02 0.0043 27.3 11.8 83 190-278 10-95 (265)
446 PRK06114 short chain dehydroge 53.8 1.7E+02 0.0038 27.5 11.3 82 190-277 8-93 (254)
447 TIGR00683 nanA N-acetylneurami 53.7 1.8E+02 0.004 28.4 11.5 88 193-310 73-164 (290)
448 TIGR01019 sucCoAalpha succinyl 53.6 43 0.00094 32.8 6.9 72 223-312 50-123 (286)
449 PRK06113 7-alpha-hydroxysteroi 53.1 2E+02 0.0044 27.0 11.8 98 191-294 12-113 (255)
450 PRK08862 short chain dehydroge 53.0 1.4E+02 0.0031 27.7 10.4 82 191-279 6-91 (227)
451 TIGR02415 23BDH acetoin reduct 53.0 1.8E+02 0.0038 27.3 11.2 96 193-294 3-103 (254)
452 COG0329 DapA Dihydrodipicolina 52.7 84 0.0018 31.0 8.9 87 193-310 76-166 (299)
453 PRK12859 3-ketoacyl-(acyl-carr 52.6 1.1E+02 0.0025 28.9 9.8 101 190-297 6-125 (256)
454 PRK07791 short chain dehydroge 52.5 2.3E+02 0.0049 27.5 12.0 79 191-275 7-97 (286)
455 PRK08263 short chain dehydroge 52.3 1.6E+02 0.0035 28.2 10.9 80 192-277 5-84 (275)
456 TIGR01832 kduD 2-deoxy-D-gluco 52.2 1.9E+02 0.004 27.0 11.1 83 189-277 4-87 (248)
457 PRK06463 fabG 3-ketoacyl-(acyl 51.9 2.1E+02 0.0045 26.9 11.5 79 191-277 8-86 (255)
458 PF03652 UPF0081: Uncharacteri 51.7 50 0.0011 28.2 6.2 59 251-314 37-99 (135)
459 PF13460 NAD_binding_10: NADH( 51.4 59 0.0013 28.9 7.2 90 193-304 1-90 (183)
460 PRK08277 D-mannonate oxidoredu 51.2 2.2E+02 0.0047 27.2 11.6 82 190-277 10-94 (278)
461 cd06562 GH20_HexA_HexB-like Be 51.1 26 0.00056 35.4 5.1 67 228-309 23-89 (348)
462 PF08543 Phos_pyr_kin: Phospho 50.6 45 0.00097 31.8 6.5 53 252-312 43-95 (246)
463 PRK05854 short chain dehydroge 50.6 1.4E+02 0.0031 29.4 10.4 82 191-279 15-101 (313)
464 PRK06079 enoyl-(acyl carrier p 50.2 1.4E+02 0.003 28.2 10.0 81 191-279 8-91 (252)
465 PRK12429 3-hydroxybutyrate deh 50.1 2.2E+02 0.0048 26.6 11.5 82 191-278 5-89 (258)
466 PRK06128 oxidoreductase; Provi 49.3 1.6E+02 0.0035 28.7 10.5 100 191-297 56-164 (300)
467 TIGR03573 WbuX N-acetyl sugar 49.2 2.9E+02 0.0063 27.8 12.6 107 190-317 60-174 (343)
468 TIGR00623 sula cell division i 49.1 1.9E+02 0.0042 25.7 10.3 88 206-307 52-142 (168)
469 PRK12743 oxidoreductase; Provi 49.0 1.7E+02 0.0037 27.6 10.4 80 192-277 4-87 (256)
470 PRK08063 enoyl-(acyl carrier p 48.4 1.9E+02 0.004 27.0 10.5 81 192-278 6-90 (250)
471 PRK07062 short chain dehydroge 48.3 2.4E+02 0.0053 26.6 11.7 79 191-275 9-92 (265)
472 PRK07856 short chain dehydroge 48.1 2.4E+02 0.0051 26.5 11.2 76 191-277 7-82 (252)
473 PRK08993 2-deoxy-D-gluconate 3 47.9 2.4E+02 0.0053 26.5 12.0 82 191-279 11-93 (253)
474 PF01408 GFO_IDH_MocA: Oxidore 47.6 65 0.0014 26.3 6.3 31 273-308 88-118 (120)
475 cd06570 GH20_chitobiase-like_1 47.3 28 0.00061 34.5 4.6 63 229-308 24-86 (311)
476 PRK07109 short chain dehydroge 47.3 2.4E+02 0.0051 28.2 11.4 79 191-275 9-90 (334)
477 PRK08936 glucose-1-dehydrogena 47.2 2.1E+02 0.0046 27.0 10.7 83 189-277 6-92 (261)
478 PRK07825 short chain dehydroge 47.0 2.3E+02 0.0051 26.9 11.1 79 191-276 6-84 (273)
479 PRK06482 short chain dehydroge 47.0 2E+02 0.0044 27.4 10.7 80 192-277 4-83 (276)
480 PRK10538 malonic semialdehyde 46.9 2.3E+02 0.0051 26.5 10.9 79 193-277 3-81 (248)
481 COG0816 Predicted endonuclease 46.8 83 0.0018 27.2 6.7 56 252-312 40-98 (141)
482 PRK07453 protochlorophyllide o 46.3 2.6E+02 0.0057 27.5 11.6 81 191-277 7-90 (322)
483 PRK07666 fabG 3-ketoacyl-(acyl 46.3 2.4E+02 0.0053 26.0 12.0 101 191-297 8-113 (239)
484 PRK13394 3-hydroxybutyrate deh 46.2 2.6E+02 0.0056 26.3 11.7 81 191-277 8-91 (262)
485 PRK04296 thymidine kinase; Pro 46.0 1.1E+02 0.0025 27.7 8.1 98 200-314 17-117 (190)
486 PRK11889 flhF flagellar biosyn 45.6 3.7E+02 0.008 27.9 14.3 55 253-312 304-362 (436)
487 TIGR00649 MG423 conserved hypo 45.5 1.7E+02 0.0037 30.4 10.3 97 191-304 287-401 (422)
488 PRK07792 fabG 3-ketoacyl-(acyl 45.3 3.1E+02 0.0066 26.9 12.3 98 191-296 13-117 (306)
489 PRK12938 acetyacetyl-CoA reduc 45.0 1.9E+02 0.0042 26.9 10.0 79 193-277 6-88 (246)
490 PF02571 CbiJ: Precorrin-6x re 45.0 75 0.0016 30.4 6.9 95 192-307 2-97 (249)
491 PRK06484 short chain dehydroge 45.0 1.9E+02 0.0041 30.8 11.0 100 193-298 8-111 (520)
492 TIGR01470 cysG_Nterm siroheme 44.6 2.6E+02 0.0056 25.8 10.8 101 188-316 7-109 (205)
493 PRK08335 translation initiatio 44.3 3.1E+02 0.0067 26.7 12.9 117 170-308 93-216 (275)
494 PRK07985 oxidoreductase; Provi 44.1 2.5E+02 0.0053 27.4 10.8 80 191-276 50-134 (294)
495 PRK08628 short chain dehydroge 44.0 2.8E+02 0.006 26.0 11.5 85 188-278 5-91 (258)
496 PF08659 KR: KR domain; Inter 44.0 2.4E+02 0.0051 25.2 10.1 98 194-296 4-109 (181)
497 TIGR01963 PHB_DH 3-hydroxybuty 43.9 2.7E+02 0.0059 25.9 11.3 80 192-277 3-85 (255)
498 PRK12935 acetoacetyl-CoA reduc 43.8 2.7E+02 0.0059 25.9 10.9 81 191-277 7-91 (247)
499 PRK07035 short chain dehydroge 43.7 2.8E+02 0.006 25.9 11.7 82 190-277 8-92 (252)
500 PRK12384 sorbitol-6-phosphate 43.6 2.8E+02 0.0061 26.0 11.4 80 192-277 4-88 (259)
No 1
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.1e-75 Score=615.01 Aligned_cols=532 Identities=85% Similarity=1.312 Sum_probs=446.1
Q ss_pred CcceecccchhhhhhhhhhcccccCccccccccccc-ccccCCCC-CCCCCCCCCCcccccCcCcccccCccccccchHH
Q 009517 1 MRRFVIGRGRNFLNRSHQQNLLSSSSSHCQSRFLSS-TSVIDSPS-SSSMAPTSSPAITVDSLNPKVLKCEYAVRGEIVS 78 (533)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (533)
||||++|+.+++.+.|+|++--+.| -|.+..+.+. .....+++ .+...+++...++...+|+++.+.+|..+++|..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~vrg~~~~ 79 (534)
T PLN02231 1 MRRFLINQAKGLVDHSRRQHHKSPS-FLSPQPRPLASLSRFSSTSEMSASDSTSSLPVTLDTINPKVLKCEYAVRGEIVT 79 (534)
T ss_pred CchHHHhHHHHHHHHhhhhhhcCCC-CCCCCCCchhHHHhhhhhhhcccccccCCCcCChhhcCHHHHHhhhhccchHHH
Confidence 9999999999999999998332211 1111111110 00000000 0111233456788889999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCC
Q 009517 79 IAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGR 158 (533)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~ 158 (533)
+|.+++++++.+++.+||++||..+||+|...|++|.+|+|+++..+..|.+++.+..+..||.++++++.+.+....+.
T Consensus 80 ~a~~~~~~~~~~~~~~pf~~~~~~nig~p~~~~~~~~~~~r~v~~~~~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~ 159 (534)
T PLN02231 80 IAQRLQEELKTNPGSYPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSLLDKSETHGLFSADAIERAWQILDQIPGR 159 (534)
T ss_pred HHHHHHHHHhcCCCcCChhhhhhhccCCHHHcCCCccHHHHHHHHhccCCccCCCCCccccCCHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999998887678889999999999888764332
Q ss_pred CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCe
Q 009517 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 159 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
....|+++.|.++||++||+++.+++|.++++++|++|+|+++++..+++.++..+||.|+++.|+|+.|...+..+|++
T Consensus 160 ~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~ 239 (534)
T PLN02231 160 ATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGT 239 (534)
T ss_pred cccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCE
Confidence 36779999999999999999999999999999999999999999999999997337999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccc
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~ 318 (533)
++.++++++++|++|+++|+++++..+.++.++++|+++|||||||.++|.+++++|+++|++||++||+||+|.++.|+
T Consensus 240 ~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~ 319 (534)
T PLN02231 240 LVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYV 319 (534)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccC
Confidence 99999998778999999999999876555557899999999999999999999999999999999999999999999996
Q ss_pred CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHc
Q 009517 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM 398 (533)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L 398 (533)
++.++.++..+..+++..+.+.++|+++||||.++|+||+|+||+++.+.++++++.+.+......+++..+|.++..++
T Consensus 320 ~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l 399 (534)
T PLN02231 320 PDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVM 399 (534)
T ss_pred CCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Confidence 54466777766543321013457999999999876899999999987444789999998877656788899999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHH
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRR 478 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (533)
+.++.++..|+.+.++.+.+++.|+++++.+.+.|++++|+.+.+|+||||+|+++.+|.+..+..+..+...+..++.+
T Consensus 400 ~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~ 479 (534)
T PLN02231 400 SPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKR 479 (534)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHH
Confidence 87765667888888888899999999999999999999899999999999999888777543333333333456677788
Q ss_pred HHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHHhcC
Q 009517 479 LLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFRN 533 (533)
Q Consensus 479 ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~~~~ 533 (533)
++++.||.++||+.|+..++.++||+++..++++|++++++|.+++++++++|+|
T Consensus 480 Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~~~~~~ 534 (534)
T PLN02231 480 LLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFMDEFRD 534 (534)
T ss_pred HHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9989999999999998656667899999988999999999999999999999987
No 2
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=4.5e-67 Score=551.90 Aligned_cols=477 Identities=54% Similarity=0.962 Sum_probs=407.6
Q ss_pred cccccCcCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcc
Q 009517 55 AITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRS 134 (533)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~ 134 (533)
.++...+++++..++|+++.++..++++++++-+.+++++|+.++|+|++|+|+..|++|.+++|+++...+.|.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~ 83 (481)
T PTZ00377 4 SFTVEDINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDP 83 (481)
T ss_pred cCCccccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCc
Confidence 45667889999999999999999999999886666777778888999999999878999999999999999999988887
Q ss_pred cccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC
Q 009517 135 ETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (533)
Q Consensus 135 ~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 214 (533)
+++..+|..+++++.+.+..... ....|++..|.++||++||+++.+++|+++++++|++|+|+++++..++++++.++
T Consensus 84 ~~~~~~P~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~ 162 (481)
T PTZ00377 84 SVSSLFPADVVARAKEYLNAIGG-GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDP 162 (481)
T ss_pred cccccCCHHHHHHHHHHHHhCCC-cccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCC
Confidence 77888999999998776665332 35679999999999999999999989999999999999999999999999986348
Q ss_pred CCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 215 NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
||+|++++|+|+.|..+++.+|++++.++++++++|++|++.|++++++..+.+.++|+|++++||||||.++|.+++++
T Consensus 163 gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~ 242 (481)
T PTZ00377 163 SDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEE 242 (481)
T ss_pred CCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHH
Confidence 99999999999999999999999999999998788999999999999875444557999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC-CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK-DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
|+++|++||++||+||+|.++.|+++.++.++..+..++....+ +.++|+++||||++++|||||+||+++.+.+++++
T Consensus 243 i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li 322 (481)
T PTZ00377 243 IIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVR 322 (481)
T ss_pred HHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHH
Confidence 99999999999999999999999654456676665445421001 24789999999985489999999998533489999
Q ss_pred HHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 374 EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 374 ~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
+++.+.....++++.++|.++..+|+++..++..++.+.++++.+++.|+++++.+.+.|++++|+.+..|+||||+|++
T Consensus 323 ~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~ 402 (481)
T PTZ00377 323 EQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPR 402 (481)
T ss_pred HHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEee
Confidence 99988776556799999999999998755445567778888888888999999999999999989999999999999988
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHHhc
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFR 532 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~~~ 532 (533)
+++|.+........+..++..++..+|+++||.+.||+.|+...+.++||||++.+++++++++++|++++++++++|.
T Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~~~ 481 (481)
T PTZ00377 403 IELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKKYG 481 (481)
T ss_pred ccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8766543332222334446667778899999999999999854456699999997778999999999999999999884
No 3
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-66 Score=486.98 Aligned_cols=471 Identities=59% Similarity=0.999 Sum_probs=445.3
Q ss_pred CCCcccccCcCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCC
Q 009517 52 SSPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSIL 131 (533)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~ 131 (533)
+.+.++...+|+++.+.+|+.+++|.-+|.+++.+.+.+ ...||+.||+-+||+|+..|++|++|+||++++|.+|.++
T Consensus 4 ~~~~lt~~~~N~~V~k~eYAVRG~i~~rA~El~~eL~~~-~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lL 82 (475)
T KOG0258|consen 4 SAKALTLDSLNPNVKKAEYAVRGPIVIRADELEKELKKG-VKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELL 82 (475)
T ss_pred cccccchhhcChhhhhhhhhhccchhhhHHHHHHHHHhc-ccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhc
Confidence 344667788999999999999999999999999999987 8899999999999999999999999999999999999999
Q ss_pred CcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc
Q 009517 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (533)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 211 (533)
+.|+ ||.++++++...+....+ +...|..++|++-+|+.+|+++.++.|.+.++++|++|+|++.|+..++..++
T Consensus 83 d~~~----fp~Dai~RA~~~L~~~gG-s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~ 157 (475)
T KOG0258|consen 83 DSPE----FPTDAIKRAKRILNDCGG-SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLI 157 (475)
T ss_pred CCCC----CCHHHHHHHHHHHHhcCC-cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHh
Confidence 9865 899999999999998887 78899999999999999999999999988999999999999999999999998
Q ss_pred cCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 212 RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
..+++.|++|-|.|+-|...+..+|+..++|.++++.+|.+|.++|++.+.+++ ++.+++++++.||.||||.+++++.
T Consensus 158 ~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ 236 (475)
T KOG0258|consen 158 AGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEEN 236 (475)
T ss_pred cCCCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHH
Confidence 667799999999999999999999999999999999999999999999999987 7889999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC-CceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK-DISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+++|..+|.+++++++.||+|++.+|.++.+++|+...+.+|++.++ ++.++.++|.||.+.|=+|.|.||+-..+.++
T Consensus 237 ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~p 316 (475)
T KOG0258|consen 237 IEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDP 316 (475)
T ss_pred HHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCCh
Confidence 99999999999999999999999999988899999999999986666 67889999999999999999999999988899
Q ss_pred HHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEE
Q 009517 371 EVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYL 450 (533)
Q Consensus 371 ~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~ 450 (533)
++.+++.++.+...|++..+|.......+.|.+++.+|+.+..+.+.+...++.|...+.+.+++++|+.|.+++|+||+
T Consensus 317 rv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~ 396 (475)
T KOG0258|consen 317 RVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYL 396 (475)
T ss_pred hHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceee
Confidence 99999999988779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
|+.+.+|.+.+..++..++..|+.+|.+||+..||+++||++||..+|..|||.++-... + +.+++++++-.++..+
T Consensus 397 fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f~~~ 473 (475)
T KOG0258|consen 397 FPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEFMDE 473 (475)
T ss_pred cccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999997444 5 8899999999999988
Q ss_pred hc
Q 009517 531 FR 532 (533)
Q Consensus 531 ~~ 532 (533)
|+
T Consensus 474 Y~ 475 (475)
T KOG0258|consen 474 YR 475 (475)
T ss_pred hC
Confidence 75
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-63 Score=504.91 Aligned_cols=358 Identities=30% Similarity=0.541 Sum_probs=319.9
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|+|++ ++ |..+++++.+++.+. ...|.+..|+++||++||+
T Consensus 30 vi~l~iG~Pd~----------------------~~-------p~~i~~a~~~a~~~~----~~~Y~~~~G~~~LReaia~ 76 (393)
T COG0436 30 VIDLSIGEPDF----------------------PT-------PEHIIEAAIEALEEG----GTHYTPSAGIPELREAIAE 76 (393)
T ss_pred EEEeCCCCCCC----------------------CC-------CHHHHHHHHHHHhcc----cCCCCCCCCCHHHHHHHHH
Confidence 99999999986 44 789999999988862 2278899999999999999
Q ss_pred HHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCC-CCCCCCHHH
Q 009517 179 GIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETSE 256 (533)
Q Consensus 179 ~~~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~ld~~~ 256 (533)
++.+++|.++++++ |++|+|+++|+..++.+++ ++||+|++++|.|+.|...+..+|++++.++++.+ ++|.+|++.
T Consensus 77 ~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~-~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~ 155 (393)
T COG0436 77 KYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALL-NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLED 155 (393)
T ss_pred HHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHH
Confidence 99999999998887 9999999999999999999 89999999999999999999999999999998766 499999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
|++++++ ++|+|+||+||||||.+++++++++|+++|++||++||+||+|.+|.|++. .+.++.++..
T Consensus 156 l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~-~~~s~~~~~~----- 223 (393)
T COG0436 156 LEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA-EHPSILELAG----- 223 (393)
T ss_pred HHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC-CcCCHhhcCC-----
Confidence 9999998 899999999999999999999999999999999999999999999999874 4566555421
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 414 (533)
...++|+++||||++ +|+|||+||+++ + +++++.+.++++ .++|++.+.|.++..+|+.++ . ...
T Consensus 224 -~~~~~i~i~s~SK~~-~mtGwRvG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~-------~-~~~ 290 (393)
T COG0436 224 -ARDRTITINSFSKTY-GMTGWRIGWVVG---PPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQ-------S-DEV 290 (393)
T ss_pred -CcceEEEEecccccc-cccccceeEeec---ChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCcc-------c-hHH
Confidence 135799999999999 899999999998 6 889999987776 778999999999999998764 1 245
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEec-CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC
Q 009517 415 RDGILSSLARRAKTLEDAFNSLEGITCNK-AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
.+.+++.|++||+.+.+.|.+++|+.+.. |+|+||+|++++.. .++..|+.++|++.||.++||..|
T Consensus 291 ~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~------------~d~~~f~~~Ll~~~gV~v~PG~~F 358 (393)
T COG0436 291 VEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL------------LDSEEFAKKLLEEAGVAVVPGSGF 358 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC------------CCHHHHHHHHHHhCCEEEeccccc
Confidence 67777999999999999999998899998 89999999877632 357889999999999999999999
Q ss_pred CCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 494 ~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
|...|.++||||++.+++++++++++|+++++.+
T Consensus 359 g~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 359 GEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred CCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 9545888999999977799999999999988764
No 5
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.9e-58 Score=471.43 Aligned_cols=396 Identities=54% Similarity=0.939 Sum_probs=334.8
Q ss_pred ccccCcCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCccc
Q 009517 56 ITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSE 135 (533)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~ 135 (533)
++...+++++..++++.+..+..++.+++++|.+ +|+|++|+|++.|++|.+|.|++++.++.|.....|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~---------vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~ 76 (407)
T PLN02368 6 LDYESLNENVKKCQYAVRGELYLRASELQKEGKK---------IIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPN 76 (407)
T ss_pred CChhhcCHHHHhhhhhcCCHHHHHHHHHHHHhhh---------hhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCcc
Confidence 4555678899999999999999999999999998 9999999999999999999999999999987666543
Q ss_pred ccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC
Q 009517 136 TQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 136 ~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
....+|++.++++...+..... ....|++..|.++||+++|+++.+++|.++++++|++|+|+++++..++++++.++|
T Consensus 77 ~~~~~p~~~i~~a~~~l~~~~~-~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pG 155 (407)
T PLN02368 77 VGLLFPADAIARAKHYLSLTSG-GLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEK 155 (407)
T ss_pred ccccCCHHHHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCC
Confidence 1124577777777666532212 367899999999999999999999889989999999999999999999998863589
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
|+|++++|+|+.|...+..+|++++.++++++++|++|++.+++++++...++.+++++++++||||||.+++.+++++|
T Consensus 156 d~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l 235 (407)
T PLN02368 156 DGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREI 235 (407)
T ss_pred CEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHH
Confidence 99999999999999999999999999999887789999999999998643333468999999999999999999999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC-CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG-EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
+++|++||++||+||+|.++.|++..++.++..+..++... +.+.++|+++||||+|+||||||+||+++.+.++++++
T Consensus 236 ~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~ 315 (407)
T PLN02368 236 LKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVE 315 (407)
T ss_pred HHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHH
Confidence 99999999999999999999997643556766654443110 12458999999999975699999999984223889999
Q ss_pred HHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEeccc
Q 009517 375 QIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 454 (533)
Q Consensus 375 ~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~ 454 (533)
.+.+.....++++.++|.++.++|+.++.++..++.+.++++.+.+.|++|++++.+.|++++|+.+..|+|+||+|+++
T Consensus 316 ~~~~~~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i 395 (407)
T PLN02368 316 EIYKVASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQI 395 (407)
T ss_pred HHHHHhcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCC
Confidence 98887545678899999999999986543444555667777788999999999999999999999999999999999999
Q ss_pred CCCHHHH
Q 009517 455 QLPEKAI 461 (533)
Q Consensus 455 ~~~~~~~ 461 (533)
++|.+.+
T Consensus 396 ~lp~~~~ 402 (407)
T PLN02368 396 KLPPKAI 402 (407)
T ss_pred CCCHHHH
Confidence 9997643
No 6
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=9.6e-56 Score=469.60 Aligned_cols=394 Identities=28% Similarity=0.484 Sum_probs=325.3
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++..+.++.+.++...+++++..|++ +|+|++|+|+..+. ++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~G~p~~~~~-------------------~~------- 163 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTH---------ILKLNIGNPAPFGF-------------------RT------- 163 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCC---------eEEecCcCCCcCCC-------------------CC-------
Confidence 67888899999998899999999887777 99999999963221 22
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+.. ...|++..|..+||++||+++.++++..+++++|++|+|+++++.+++++++ ++||+|++
T Consensus 164 p~~~~~~~~~~~~~-----~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~-~~Gd~Vli 237 (517)
T PRK13355 164 PDEVVYDMAQQLTD-----TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALL-DDGDEVLI 237 (517)
T ss_pred CHHHHHHHHHHhhc-----CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhC-CCCCEEEE
Confidence 78899998887754 3579999999999999999998877667889999999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+.|...+..+|++++.++++++++|.+|++++++++++ ++++|+++|||||||.+++.+++++|+++|+
T Consensus 238 ~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~ 311 (517)
T PRK13355 238 PSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIAR 311 (517)
T ss_pred cCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHH
Confidence 9999999999999999999999998877899999999999876 7999999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH----HHHHH
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VREQI 376 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~----~~~~l 376 (533)
+||++||+||+|.+|.|++. ++.++..+ .++..+|+++||||++ +++|||+||+++. .+++ +++.+
T Consensus 312 ~~~~~ii~DE~Y~~~~~~~~-~~~s~~~~-------~~~~~vi~~~S~SK~~-~~~G~RiG~~i~~-~~~~~~~~~~~~l 381 (517)
T PRK13355 312 EHQLIIFSDEIYDRLVMDGL-EHTSIASL-------APDLFCVTFSGLSKSH-MIAGYRIGWMILS-GNKRIAKDYIEGL 381 (517)
T ss_pred HcCcEEEEehhhhhhcCCCC-CcccHHHh-------CCCCeEEEEecchhhc-cCcccceEEEEee-CchhhHHHHHHHH
Confidence 99999999999999998653 45565554 3555688899999999 8999999999862 1444 34444
Q ss_pred HHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCC
Q 009517 377 YKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 377 ~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~ 456 (533)
........+.+.++|.++..+|...+ .+..+ +... +++.++++++.+.|++++|+.+..|+|+||+|++++.
T Consensus 382 ~~~~~~~~~~~~~~q~a~~~aL~~~~----~~~~~---~~~~-~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~ 453 (517)
T PRK13355 382 NMLANMRLCSNVPAQSIVQTALGGHQ----SVKDY---LVPG-GRVYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDV 453 (517)
T ss_pred HHHhcCcCCcChHHHHHHHHHhcCCc----cHHHH---HHHH-HHHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCc
Confidence 43344557789999999999996422 22223 3333 3344567899999999989999999999999977652
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.. .+..++..++.++|+++||.++||..|+. .+.++|||+++.++++|++++++|+++++.++
T Consensus 454 ~~--------~~~~~~~~~~~~ll~~~gV~v~pg~~F~~-~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 454 KK--------FNIHDDEQFALDLLHDKKVLIVQGTGFNW-DKPDHFRVVYLPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred cc--------CCCCCHHHHHHHHHHhCCEEEeCcchhCC-CCcCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 10 01224566777889999999999999973 45569999999888999999999999987653
No 7
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2e-53 Score=439.64 Aligned_cols=377 Identities=19% Similarity=0.329 Sum_probs=314.3
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++..++.+.+..+...+. ..+ +|+|++|.|+. +.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-----~~~---------~i~l~~G~P~~----------------------~~------- 68 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLAI-----KHG---------AINLGQGFPNF----------------------DG------- 68 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHhh-----cCC---------eEecCCCCCCC----------------------CC-------
Confidence 345666666665544444432 123 89999999985 22
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
|+.+.+++.+.+.+ ....|++..|.++||+++++++.+++|++++++ +|++|+|+++|+..++..++ ++||+|+
T Consensus 69 ~~~~~~~~~~~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~-~~gd~Vl 143 (413)
T PLN00175 69 PDFVKEAAIQAIRD----GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVI 143 (413)
T ss_pred CHHHHHHHHHHHhc----CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhC-CCCCEEE
Confidence 57777777777765 246899999999999999999999999888887 79999999999999999998 8999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
+++|+|..|...++..|++++.++++++ +|++|++.|++.+.+ ++++|++++||||||.++|.+++++|+++|
T Consensus 144 v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a 216 (413)
T PLN00175 144 LFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLC 216 (413)
T ss_pred EeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHH
Confidence 9999999999999999999999999865 489999999999876 789999999999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
++|+++||+||+|.++.|++. +.++.++. . ...++|+++||||+| ++||+|+||+++ ++++++.+...
T Consensus 217 ~~~~~~ii~De~Y~~l~~~~~--~~s~~~~~-~-----~~~~vi~i~SfSK~~-~~~G~RiG~~v~---~~~l~~~l~~~ 284 (413)
T PLN00175 217 KENDVLAFTDEVYDKLAFEGD--HISMASLP-G-----MYERTVTMNSLGKTF-SLTGWKIGWAIA---PPHLTWGVRQA 284 (413)
T ss_pred HHcCcEEEEecccCccccCCc--ccChhhCC-C-----CcCcEEEEecchhhc-cCcchheeeeEe---CHHHHHHHHHH
Confidence 999999999999999988642 33443331 1 134689999999999 899999999998 99999999887
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCH
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPE 458 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~ 458 (533)
.. ..++++.+.|.++..+|++++ .++++++++|+++++.+.+.|++. |+.+..|+|+||+|+++...
T Consensus 285 ~~~~~~~~s~~~Q~a~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~f~~~~~~~~- 352 (413)
T PLN00175 285 HSFLTFATATPMQWAAVAALRAPE----------SYYEELKRDYSAKKDILVEGLKEV-GFKVYPSSGTYFVMVDHTPF- 352 (413)
T ss_pred HhhccCCCCHHHHHHHHHHHhCCH----------HHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccc-
Confidence 65 568899999999999996432 456778889999999999999998 89999999999999875311
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC--CCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 459 KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV--PGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~--~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+..++..++..+++++||.+.||..|+.. .+.++|||+++.++++|++++++|+++++
T Consensus 353 ---------~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 353 ---------GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred ---------CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 12235667778888899999999999632 34569999999888999999999998875
No 8
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=5.3e-53 Score=439.21 Aligned_cols=390 Identities=25% Similarity=0.383 Sum_probs=304.5
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
.+..++++....|++ ++++++|+|+..+. .+ |+.+.+++.+.+.+
T Consensus 19 ~~~~~~~~~~~~g~~---------~~~~~~G~p~~~~~-------------------~~-------p~~~~~a~~~~~~~ 63 (433)
T PRK06855 19 NIVAVAKKLEKLGVK---------ITWENIGDPIAKGE-------------------KI-------PDWMKEIVAELVMD 63 (433)
T ss_pred HHHHHHHHHHhcccc---------ccccccCCCcccCC-------------------CC-------CHHHHHHHHHHhhc
Confidence 355566666555555 99999999953211 21 56666676666544
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH-H
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-A 233 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~-~ 233 (533)
. ....|++..|.++||+++|+++.+++|+.+++++|++|+|+++++..++. ++ ++||.|++++|+|+.|.... .
T Consensus 64 ~---~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~-~~Gd~Vlv~~P~Y~~~~~~~~~ 138 (433)
T PRK06855 64 D---KSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LL-RREARVIGPSPAYSTHSSAEAA 138 (433)
T ss_pred C---CCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hc-CCCCeEEEeCCCCchHHHHHHH
Confidence 1 35789999999999999999999989999999999999999999999986 66 79999999999999987553 3
Q ss_pred HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 009517 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (533)
Q Consensus 234 ~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~ 313 (533)
..|++++.++++++++|++|+++|+++++. .++++++++++||||||.++|.+++++|+++|++||++||+||+|.
T Consensus 139 ~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~----~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~ 214 (433)
T PRK06855 139 HAGYPPVTYRLDPENNWYPDLDDLENKVKY----NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYN 214 (433)
T ss_pred hcCCeEEEEecccccCCCCCHHHHHHHHhc----CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 458999999998777899999999999874 1257899999999999999999999999999999999999999999
Q ss_pred cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec--CCH---HHHHHHHHhhhccccCCh
Q 009517 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG--FSA---EVREQIYKVASVNLCSNI 388 (533)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~--~~~---~~~~~l~~~~~~~~~~~~ 388 (533)
++.|++. ++.++..+ .++.++|+++||||++ ++||||+||+++.+ .++ .+++.+........+++.
T Consensus 215 ~l~~~~~-~~~sl~~~-------~~~~~~I~~~S~SK~~-~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (433)
T PRK06855 215 NIVYNGK-KTVPLSEV-------IGDVPGIALKGISKEL-PWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTT 285 (433)
T ss_pred ccccCCC-CCCCHHHH-------cCcCCeEEEecCcccc-CCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCCh
Confidence 9998653 44565554 2333579999999999 78999999999731 122 233433333333457789
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH---------
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK--------- 459 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~--------- 459 (533)
+.|.++..+|+++. +.++++++++.|+++++.+.+.|++++|+.+..|+||||+|++++....
T Consensus 286 ~~Q~a~~~~l~~~~--------~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~ 357 (433)
T PRK06855 286 LPQMAIPRIMSHPE--------YKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIE 357 (433)
T ss_pred HHHHHHHHhhcCCc--------HHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcc
Confidence 99999999997543 3456678899999999999999998888888999999999977652100
Q ss_pred ------HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHH
Q 009517 460 ------AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 460 ------~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~ 527 (533)
........+..+++.++..+++++||.+.||+.|+. .+ ++|||+++ .++++|++++++|+++++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~-~~-~~~Rls~~~~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 358 NPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCT-EL-NGFRVTLLERDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred hhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCC-CC-CceEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence 000000000113567777888999999999999973 33 36999998 68999999999999999864
No 9
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=7.4e-53 Score=437.04 Aligned_cols=368 Identities=23% Similarity=0.360 Sum_probs=304.9
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|+|+..+.. .+ |+++.+++.+.+... ....|++..|.++||+++++
T Consensus 54 ~i~l~~G~P~~~~~~------------------~~-------~~~~~~a~~~al~~~---~~~~Y~~~~G~~~lr~aia~ 105 (430)
T PLN00145 54 VLPLGHGDPSAFPCF------------------RT-------APEAEDAVAAALRSG---KYNSYSTCVGLLPARRAIAE 105 (430)
T ss_pred eeeCCCCCCCCCCCC------------------CC-------CHHHHHHHHHHHHcC---cCCCCCCCccCHHHHHHHHH
Confidence 999999999853211 21 688888888888652 24579999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++++.+|.++++++|++|+|+++++.++++.+. ++||+|++++|+|+.|...+...|++++.+++.++++|.+|++.++
T Consensus 106 ~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~-~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 184 (430)
T PLN00145 106 YLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLA-QPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVE 184 (430)
T ss_pred HHhhccCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHH
Confidence 999888988999999999999999999999998 8999999999999999999999999999999877778999999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+++ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.|++ .++.++..+ ..
T Consensus 185 ~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~-~~~~~~~~~-------~~ 250 (430)
T PLN00145 185 ALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS-KPFVPMGVF-------GE 250 (430)
T ss_pred HHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC-CCccchhhh-------cc
Confidence 98876 79999999999999999999999999999999999999999999999865 344554443 23
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH------HHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR------EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYC 412 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~------~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 412 (533)
..++|+++||||.| ++||||+||+++.. ++.++ ..+........+++.+.|.++..+|... ..
T Consensus 251 ~~~vi~~~S~SK~~-~~pG~RlG~iv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~---------~~ 319 (430)
T PLN00145 251 VAPVLTLGSISKRW-VVPGWRLGWIATCD-PNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANT---------KE 319 (430)
T ss_pred cCcEEEEecccccc-CCCCeeEEEEEEec-chhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcC---------HH
Confidence 45799999999998 79999999998621 33333 3344443344567889999999988632 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCC
Q 009517 413 AERDGILSSLARRAKTLEDAFNSLEGITC-NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGS 491 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 491 (533)
++++++++.++++++.+.+.|++++|+.+ ..|+|+||+|++++... ..+..++..++.++++++||.+.||.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~-------~~~~~~~~~~~~~ll~~~gV~v~pG~ 392 (430)
T PLN00145 320 EFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSC-------LSGIKDDMDFCCKLAKEESVVVLPGS 392 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhh-------cCCCCCHHHHHHHHHHhCCEEEeCcc
Confidence 45677888999999999999999888886 47999999997765210 00122456778889999999999999
Q ss_pred CCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 492 GFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 492 ~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
.|+. + +||||+++.+++.+++++++|++++.++.+.
T Consensus 393 ~fg~-~--~~lRis~~~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 393 ALGM-K--NWLRITFAIDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred ccCC-C--CeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 9984 3 3999999988889999999999999887764
No 10
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=4.4e-53 Score=435.53 Aligned_cols=382 Identities=21% Similarity=0.308 Sum_probs=305.2
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
+++...+...+..+....+..+..+++ +|+|++|+|.+ +. |+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~-------~~ 46 (388)
T PRK07366 5 QRLQPLQSNVFADMDRAKAQARAAGKE---------LIDLSLGSSDL----------------------PA-------PA 46 (388)
T ss_pred hhhhcCCccHHHHHHHHHHHHHhcCCC---------eEEeCCCCCCC----------------------CC-------CH
Confidence 344445555544455555555655666 99999999874 22 57
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
.+.+++.+.+... ....|++..|.++||+++|+++.+.+|+.++++ +|++|+|+++++..+++.++ ++||+|+++
T Consensus 47 ~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~-~~gd~Vlv~ 122 (388)
T PRK07366 47 HALEAIAQSLHDP---STHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVL-NPGDFALLL 122 (388)
T ss_pred HHHHHHHHHHhCc---ccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhC-CCCCEEEEc
Confidence 7787777766532 246799999999999999999999899889998 69999999999999999998 899999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~ 301 (533)
+|+|+.|...++..|++++.++++++++|.+|++++++.+.+ ++++|++++||||||.++|.+++++|+++|++
T Consensus 123 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~ 196 (388)
T PRK07366 123 DPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQ 196 (388)
T ss_pred CCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHHH
Confidence 999999999999999999999998777788999999888765 68999999999999999999999999999999
Q ss_pred cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh
Q 009517 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (533)
Q Consensus 302 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~ 381 (533)
||++||+||+|.++.|++..+..++..+. ....++|+++||||+| |+||+|+||+++ ++++++.+.+...
T Consensus 197 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~------~~~~~vi~~~SfSK~~-g~~GlRiG~~v~---~~~li~~l~~~~~ 266 (388)
T PRK07366 197 HDLVLVHDFPYVDLVFDGEVEPPSILQAD------PEKSVSIEFFTLSKSY-NMGGFRIGFAIG---NAQLIQALRQVKA 266 (388)
T ss_pred cCeEEEEecchhhcccCCCCCCCChhhCC------CCcccEEEEeeccccc-CCcchhheehcC---CHHHHHHHHHHHh
Confidence 99999999999999986542234443331 1223589999999999 899999999998 9999999988765
Q ss_pred -ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 382 -VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 382 -~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
...+..+..+.++.+.+.. ..++++++++.++++++.+.+.|+++ |+.+..|+||+|+|++++...
T Consensus 267 ~~~~~~~~~~~~~a~~~l~~----------~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~~~~-- 333 (388)
T PRK07366 267 VVDFNQYRGILNGAIAALTG----------PQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKLPEPW-- 333 (388)
T ss_pred hcccCCCHHHHHHHHHHHhC----------cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCccc--
Confidence 3344433333344444421 12557788899999999999999998 888888999999997765210
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
..++..++..+++++||.+.||+.|+. .+.++|||+++.+.+++++++++|++++
T Consensus 334 --------~~~~~~~~~~l~~~~gv~v~pg~~f~~-~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 334 --------QGNSVEFCTQLVAQTGVAASPGSGFGK-SGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred --------CCCHHHHHHHHHHhCCEEEeCchHhCc-CCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 012455666777889999999999973 3445999999977889999999998763
No 11
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-54 Score=416.35 Aligned_cols=389 Identities=22% Similarity=0.336 Sum_probs=319.0
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceee-ccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILY-CNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
++...+++++.++..++.+.. ..+ |++|.|+. +. |.
T Consensus 11 ~l~~~~~~vw~e~~~la~e~~--------------~~~~LgqGfp~~----------------------~~-------P~ 47 (420)
T KOG0257|consen 11 NLSTSKPYVWTEINRLAAEHK--------------VPNPLGQGFPDF----------------------PP-------PK 47 (420)
T ss_pred cccccCCcHHHHHHHHHHhcC--------------CCCcccCCCCCC----------------------CC-------cH
Confidence 455566676666666666654 244 99999996 33 67
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
-+.+++.+.+... ..++|.+..|.++|++++++.+...+|....++ +|++|.|+.+++..++..++ ++||+|++.
T Consensus 48 fv~ea~~~~~~~~---~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~-~~GDeVii~ 123 (420)
T KOG0257|consen 48 FVTEAAKNAAKEP---STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL-NPGDEVIVF 123 (420)
T ss_pred HHHHHHHHHhccc---hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc-CCCCEEEEe
Confidence 7888888877763 378999999999999999999999888766655 69999999999999999999 899999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecC------CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLD------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~------~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
+|.|..|....+.+|.+++.++.. ...+|.+|++.++.++++ +||+|++|+||||||.++|+++|++|
T Consensus 124 eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe~i 197 (420)
T KOG0257|consen 124 EPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELERI 197 (420)
T ss_pred cCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHHHH
Confidence 999999999999999999999998 556899999999999998 89999999999999999999999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
+++|++||+++|+||+|..+.|++. .+..+..+ ++| ..++|.++||||+| |++|||+||+++ ++.++..
T Consensus 198 a~l~~k~~~lvisDevYe~~v~d~~-~h~r~asl-Pgm-----~ertitvgS~gKtf-~~TGWrlGW~ig---p~~L~~~ 266 (420)
T KOG0257|consen 198 AELCKKHGLLVISDEVYEWLVYDGN-KHIRIASL-PGM-----YERTITVGSFGKTF-GVTGWRLGWAIG---PKHLYSA 266 (420)
T ss_pred HHHHHHCCEEEEEhhHhHHHhhCCC-cceeeecC-Cch-----hheEEEecccccee-eeeeeeeeeeec---hHHhhhh
Confidence 9999999999999999999999874 45666665 666 23689999999999 899999999998 9999999
Q ss_pred HHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEec
Q 009517 376 IYKVAS-VNLCSNISGQILASLVMSPPKVGDESYE--SYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452 (533)
Q Consensus 376 l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~ 452 (533)
+..+++ ..+..++..|.|.++++..+.. .. .-....+.+.+.|+++|+.|.+.|+++ |++++.|+|++|+|+
T Consensus 267 ~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~----~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~a 341 (420)
T KOG0257|consen 267 LFPVHQNFVFTCPTPIQEASAAAFALELA----CLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWA 341 (420)
T ss_pred HHHHhhccccccCcHHHHHHHHHHhhhhh----ccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEE
Confidence 988876 5566777777777777654321 00 001234568899999999999999999 999999999999999
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC----CceEEEEecCCcCcHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG----TWHFRCTILPQEDKIPAIVTRLT 521 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g----~~~iRis~~~~~e~i~~~~~~l~ 521 (533)
+++++............+++..++..++++.|+.+.|++.||..+. .+++|++++.+++.++.++++++
T Consensus 342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 9883321100011112235667788999999999999999996432 34788888888888888888887
No 12
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=2.7e-52 Score=430.74 Aligned_cols=380 Identities=21% Similarity=0.321 Sum_probs=306.4
Q ss_pred ccccCccccccchHHHHHHH-HHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 64 KVLKCEYAVRGEIVSIAQRL-QQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
++..++.+++..+...+.+. ...|++ +|+|++|+|++ +. |+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~p~~----------------------~~-------~~ 45 (396)
T PRK09147 4 RLDRLQPYPFEKLRALFAGVTPPADLP---------PISLSIGEPKH----------------------PT-------PA 45 (396)
T ss_pred hhhcCCcchHHHHHHHHHhhhhccCCC---------eEecCCCCCCC----------------------CC-------CH
Confidence 44455555555555555554 222444 99999999875 21 56
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHhccCC---CCe
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSE---NDG 217 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~~~~---gd~ 217 (533)
.+.+++.+.+.. ...|++..|.++||+++|+++.+++|++ ++++ +|++|+|+++++..++++++ ++ ||.
T Consensus 46 ~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~-~~~~~gd~ 119 (396)
T PRK09147 46 FIKDALAANLDG-----LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVI-DRDGPGPL 119 (396)
T ss_pred HHHHHHHHHhhh-----hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHc-CCCCCCCE
Confidence 677777666543 5679999999999999999999988988 8885 89999999999999999998 78 899
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|++++|+|..|..+++..|++++.+|++++++|++|++.+++.+.+ ++++|++++||||||.++|.+++++|++
T Consensus 120 vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~ 193 (396)
T PRK09147 120 VVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLFA 193 (396)
T ss_pred EEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHHH
Confidence 9999999999999999999999999998777899999999988865 7999999999999999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++|+++||+||+|.++.|++..+..+.......++. +...++|++.||||.+ +++|+|+||+++ ++++++.+.
T Consensus 194 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~-~~~GlRiG~~~~---~~~l~~~~~ 268 (396)
T PRK09147 194 LSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGR-DDFKRLVVFHSLSKRS-NVPGLRSGFVAG---DAALLKKFL 268 (396)
T ss_pred HHHHcCeEEEeeccccccccCCCCCCchhhhhccccCc-cccccEEEEecccccc-CCccceeeeecC---CHHHHHHHH
Confidence 99999999999999999988653222222211111110 1124799999999998 899999999998 999999888
Q ss_pred Hhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCC
Q 009517 378 KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 378 ~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~ 456 (533)
+... ..++++.+.|.++...+.. .+++++.++.++++++.+.+.|++. +.+..|+||+|+|++++.
T Consensus 269 ~~~~~~~~~~~~~~q~a~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~~ 335 (396)
T PRK09147 269 LYRTYHGCAMPPAVQAASIAAWND-----------EAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVPG 335 (396)
T ss_pred HHhhhcccCCCHHHHHHHHHHhcc-----------hhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECCC
Confidence 7665 4567888899887777642 2346778888999999999999874 567789999999987651
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-----CCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-----VPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
++..++..+++++||.+.||..|+. ..+.+++||+++.+++++++++++|+++++
T Consensus 336 --------------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 336 --------------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred --------------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 2455667777789999999999863 233569999999778899999999998764
No 13
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-52 Score=430.04 Aligned_cols=389 Identities=21% Similarity=0.331 Sum_probs=313.5
Q ss_pred cccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHH
Q 009517 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (533)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v 144 (533)
+...+..++..+...+.+++..+.+ +++|+.|.|+. +. |..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~g~p~~----------------------~~-------~~~~ 51 (403)
T PRK08636 10 IKRLPKYVFAEVNELKMAARRAGED---------IIDFSMGNPDG----------------------PT-------PQHI 51 (403)
T ss_pred HHhCCccHHHHHHHHHHHHHhcCCC---------EEEcCCcCCCC----------------------CC-------CHHH
Confidence 4444555566667777777665555 99999999884 22 5677
Q ss_pred HHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCC
Q 009517 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (533)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p 223 (533)
++++.+.+... ....|++..|.++||+++|+++.+++|++++++ +|++|+|+++++..++++++ ++||+|++++|
T Consensus 52 ~~~~~~~~~~~---~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P 127 (403)
T PRK08636 52 IDKLCESAQKP---KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-NPGDVAIVPDP 127 (403)
T ss_pred HHHHHHHhcCC---ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC-CCCCEEEEcCC
Confidence 88877666431 257899999999999999999999889989988 79999999999999999998 89999999999
Q ss_pred cCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh-cCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 224 QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA-KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~-~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
+|+.|..+++..|+++++++++.+++|++|++.+.+.+++.-+ ..++++++++++||||||.++|.+++++|+++|++|
T Consensus 128 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~ 207 (403)
T PRK08636 128 AYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKE 207 (403)
T ss_pred CCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 9999999999999999999987555789999876555543321 124789999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
+++||+||+|.++.|++. +..++..+ .. ....+|+++||||+| |+||+|+||+++ ++++++.+.+...
T Consensus 208 ~~~II~De~Y~~l~~~~~-~~~~~~~~-~~-----~~~~~i~~~S~SK~~-~~~GlRiG~iv~---~~~li~~~~~~~~~ 276 (403)
T PRK08636 208 RFYIISDIAYADITFDGY-KTPSILEV-EG-----AKDVAVESYTLSKSY-NMAGWRVGFVVG---NKKLVGALKKIKSW 276 (403)
T ss_pred CcEEEEeccchhhccCCC-CCCChhcC-CC-----ccccEEEEEeccccc-CCccceeeeeeC---CHHHHHHHHHHHHH
Confidence 999999999999988642 33444433 11 123578899999999 899999999997 9999999888765
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~ 461 (533)
...+++.+.|.++..+++.. .++++++++.++++++.+.+.|++. |+.+..|+||+|+|++++....
T Consensus 277 ~~~~~~~~~q~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~~-- 343 (403)
T PRK08636 277 LDYGMFTPIQVAATIALDGD----------QSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIPEPAR-- 343 (403)
T ss_pred hcccCChHHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECCCccC--
Confidence 34677788888887776421 2456778899999999999999997 8888899999999987652100
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
..++..++..+++++||.+.||..|+. .+.++|||+++.+++++++++++|+++++.+
T Consensus 344 -------~~~~~~l~~~ll~~~gV~v~pg~~f~~-~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 344 -------HLGSLEFSKQLLTEAKVAVSPGIGFGE-YGDEYVRIALIENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred -------CCCHHHHHHHHHHhCCEEEecchhhCc-CCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 012456666778889999999999973 4456999999988889999999999998763
No 14
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-52 Score=392.58 Aligned_cols=369 Identities=24% Similarity=0.351 Sum_probs=325.7
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
.+|.|++|+|..++.-+ + .+++.+|+.+.+... ...+|.|..|....|+++|
T Consensus 62 ~iipl~~GDPsv~~~~~------------------t-------s~~a~~Av~~al~Sg---k~N~Yaps~G~~~AR~AVA 113 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFR------------------T-------SQEAEQAVVDALRSG---KGNGYAPSVGILPARRAVA 113 (447)
T ss_pred eeccCCCCCCCcccccc------------------C-------CHHHHHHHHHHHhcC---CCCCcCCccccHHHHHHHH
Confidence 49999999999755433 2 588899999988864 3678999999999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
+|+++...-.+++++|++|.|.++|++.++.++. +||..|++|.|+|+-|...+...|.++..|.+-++.+|.+|++.+
T Consensus 114 eYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~v 192 (447)
T KOG0259|consen 114 EYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGV 192 (447)
T ss_pred HHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHH
Confidence 9998877778899999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
|..+.+ +|.+++++||+||+|.++|.+.|++|++.|++++++||.||+|..++|++ .++.++..+ .
T Consensus 193 eal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~-~pfvpmg~f-------s 258 (447)
T KOG0259|consen 193 EALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD-KPFVPMGKF-------S 258 (447)
T ss_pred HHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC-CCccchhhc-------c
Confidence 999988 89999999999999999999999999999999999999999999999955 688888777 4
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEec-----CCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTG-----FSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYC 412 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~-----~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 412 (533)
..+.||.++|+||.| -.||||+||++... .+..+++.+.++.+.+.+++++.|.|+-.+|.... .
T Consensus 259 siVPVitlggisKrW-~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp---------~ 328 (447)
T KOG0259|consen 259 SIVPVITLGGISKRW-IVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTP---------E 328 (447)
T ss_pred ccCceEeeccccccc-ccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhCh---------H
Confidence 567899999999999 58999999999843 23455677877777889999999999999986432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCC
Q 009517 413 AERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGS 491 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 491 (533)
+........++.+.+..++.|+++|++. ..+|+|.||+|+++++.. ...+.++..|+.+|.+|..|.+.||.
T Consensus 329 efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~-------~~~~~dD~dFc~kL~~Eesv~~LPG~ 401 (447)
T KOG0259|consen 329 EFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSL-------FPDIEDDVDFCQKLAREESVICLPGQ 401 (447)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhh-------hccccccHHHHHHHhhhcceEEeccc
Confidence 3456677788999999999999999999 689999999998776331 12367889999999999999999999
Q ss_pred CCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 492 GFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 492 ~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.|+. ++ |+|++++..++.++++++||+.+..+..+
T Consensus 402 af~~-~n--w~Ri~i~~~~~~leea~~Rik~Fc~RH~~ 436 (447)
T KOG0259|consen 402 AFGL-KN--WLRIVITVEEEMLEEAFSRIKEFCDRHSK 436 (447)
T ss_pred cccC-CC--eEEEEEccChHHHHHHHHHHHHHHHhhhh
Confidence 9995 43 99999999999999999999999998874
No 15
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-52 Score=428.09 Aligned_cols=377 Identities=19% Similarity=0.300 Sum_probs=309.5
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++....++.+..+...+.+.+..+++ +|+|++|.|+. .. |
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~g~p~~----------------------~~-------~ 47 (399)
T PRK07681 6 ATRMKAFQSSIFSELGAYKKEKIAAGHK---------MIDLSIGNPDM----------------------PP-------A 47 (399)
T ss_pred hHHHhhcCccHHHHHHHHHHHhhhcCCC---------eEEeCCCCCCC----------------------CC-------C
Confidence 3455555566555555565555554444 99999999874 21 5
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
+.+.+++.+.+... ....|+ ..|..+||++||+++++++|+++++ ++|++|+|+++++..++.+++ ++||+|++
T Consensus 48 ~~~~~~~~~~~~~~---~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~-~~Gd~Vlv 122 (399)
T PRK07681 48 DFVREEMVHTANQK---ESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYA-NPGDIILV 122 (399)
T ss_pred HHHHHHHHHHHhcc---ccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhC-CCCCEEEE
Confidence 66777776666532 234565 4799999999999999999999998 899999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+.|...++..|++++.++++++++|.+|++++++++.+ ++++|++++||||||.++|.+++++|+++|+
T Consensus 123 ~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~ 196 (399)
T PRK07681 123 PDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAK 196 (399)
T ss_pred CCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998777899999999998865 7899999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||++||+||+|.++.|++. +..++.++. ....++|+++||||.| |+||+|+||+++ ++++++.+....
T Consensus 197 ~~~~~iI~De~y~~~~~~~~-~~~~~~~~~------~~~~~~i~~~S~SK~~-~~~GlRiG~~i~---~~~l~~~~~~~~ 265 (399)
T PRK07681 197 KHNIIVVHDFAYAEFYFDGN-KPISFLSVP------GAKEVGVEINSLSKSY-SLAGSRIGYMIG---NEEIVRALTQFK 265 (399)
T ss_pred HcCeEEEEeccchhheeCCC-CCCChhhCC------CCcccEEEEeeccccc-CCccceeEEEec---CHHHHHHHHHHH
Confidence 99999999999999988653 334443321 1123689999999999 899999999998 999999998876
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. ..++++.+.|.++..+|.+.. +++++.++.++++++.+.+.|++. |+.+..|+||+|+|++++..
T Consensus 266 ~~~~~~~s~~~q~~~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~~~-- 332 (399)
T PRK07681 266 SNTDYGVFLPIQKAACAALRNGA----------AFCEKNRGIYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIPKG-- 332 (399)
T ss_pred hhcccCCCHHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECCCC--
Confidence 5 567889999999999997532 345667788999999999999998 88888899999999776411
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
+ ++..++..+++++||.+.||..|+. .+.++|||+++.+++++++++++|++
T Consensus 333 ---------~-~~~~~~~~l~~~~gv~v~pg~~f~~-~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 333 ---------W-TSLSFAYALMDRANVVVTPGHAFGP-HGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred ---------C-CHHHHHHHHHHhCCEEEeCChhhCc-CCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 1 3456677777779999999999973 44459999999778899999999987
No 16
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1e-51 Score=431.21 Aligned_cols=371 Identities=21% Similarity=0.345 Sum_probs=302.5
Q ss_pred cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHH
Q 009517 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (533)
Q Consensus 97 ~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 176 (533)
.++|+|++|+|+..+.. .+ |+++.+++.+.+... ....|++..|.++||+++
T Consensus 66 ~~vi~l~~Gdp~~~p~~------------------~~-------~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lR~ai 117 (462)
T PLN02187 66 KTILPLGHGDPSVYPCF------------------RT-------CIEAEDAVVDVLRSG---KGNSYGPGAGILPARRAV 117 (462)
T ss_pred CCeEECCCCCCCCCCCC------------------CC-------CHHHHHHHHHHHhCC---CCCCCCCCCChHHHHHHH
Confidence 34999999999852111 11 678888888877652 246799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHH
Q 009517 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (533)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~ 256 (533)
|++++++++..+++++|++|+|+++++..++++++ ++||+|++++|+|+.|...+...|++++.+++.++++|++|+++
T Consensus 118 A~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~ 196 (462)
T PLN02187 118 ADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLA-RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEG 196 (462)
T ss_pred HHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHH
Confidence 99999888988999999999999999999999998 89999999999999999999999999999999766789999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
|++++++ ++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.|++. ++.++..+
T Consensus 197 l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~-~~~s~~~~------- 262 (462)
T PLN02187 197 IEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN-PFVSMGKF------- 262 (462)
T ss_pred HHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CceeHHHh-------
Confidence 9998866 789999999999999999999999999999999999999999999999653 44455443
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH---HHHHHHHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE---VREQIYKVAS---VNLCSNISGQILASLVMSPPKVGDESYES 410 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~---~~~~l~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~ 410 (533)
....++|+++||||+| ++||||+||+++. .++. +++.+..... .+.+++.+.|.++..+|++.
T Consensus 263 ~~~~~vi~l~SfSK~f-~~pGlRiG~~v~~-~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~--------- 331 (462)
T PLN02187 263 ASIVPVLTLAGISKGW-VVPGWKIGWIALN-DPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA--------- 331 (462)
T ss_pred ccCCcEEEEecchhhc-CCccceeEEEEec-CchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC---------
Confidence 2334689999999998 8999999999972 1222 3345544443 22356899999999998631
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc
Q 009517 411 YCAERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP 489 (533)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p 489 (533)
..++++++++.++++++.+.+.|++++++. +..|+||+|+|++++.+. ..++.++..++.++++++||.+.|
T Consensus 332 ~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~-------~~~~~~~~~~~~~ll~~~gV~v~p 404 (462)
T PLN02187 332 DKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSL-------MDNIKDDIDFCVKLAREENLVFLP 404 (462)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhh-------CCCCCCHHHHHHHHHhhCCEEEEC
Confidence 125567788899999999999999985554 347899999998764210 011223556677888999999999
Q ss_pred CCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHHh
Q 009517 490 GSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 531 (533)
Q Consensus 490 g~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~~ 531 (533)
|..|+. . +||||+++.+++++++++++|.++++++.++.
T Consensus 405 G~~fg~-~--~~iRis~~~~~e~l~~al~rL~~~l~~~~~~~ 443 (462)
T PLN02187 405 GDALGL-K--NWMRITIGVEAHMLEDALERLKGFCTRHAKKT 443 (462)
T ss_pred ccccCC-C--CeEEEEeCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 999973 3 49999999888999999999999999887653
No 17
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-51 Score=426.48 Aligned_cols=360 Identities=19% Similarity=0.308 Sum_probs=299.7
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|++|+|+. ..+|+.+.+++.+.+... ....|++..|.++||++++
T Consensus 40 ~~i~l~~g~~~~----------------------------~~p~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~LR~aia 88 (405)
T PRK06207 40 RPVDFSHGDVDA----------------------------HEPTPGAFELFSAGVERG---GVQAYTEYRGDADIRELLA 88 (405)
T ss_pred CceecCCcCCCC----------------------------CCCCHHHHHHHHHHHhcC---CCccCCCCCCCHHHHHHHH
Confidence 489999999873 111577888887777642 2467999999999999999
Q ss_pred HHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecC---CCCCCCCC
Q 009517 178 AGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD---EATGWGLE 253 (533)
Q Consensus 178 ~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~---~~~~~~ld 253 (533)
+++.+.+|.++++ ++|++|+|+++++..+++.++ ++||+|++++|+|+.|...++..|++++.++++ .+++|++|
T Consensus 89 ~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~-~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d 167 (405)
T PRK06207 89 ARLAAFTGAPVDAADELIITPGTQGALFLAVAATV-ARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLD 167 (405)
T ss_pred HHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcC
Confidence 9999988988888 899999999999999999998 899999999999999999999999999999986 23468999
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhc
Q 009517 254 TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (533)
Q Consensus 254 ~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~ 333 (533)
++.|++++++ ++++|++++||||||.+++.+++++|+++|++||++||+||+|.++.|++. ++.++..+ .
T Consensus 168 ~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~--~- 237 (405)
T PRK06207 168 LDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT-SYTHLRAL--P- 237 (405)
T ss_pred HHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCCchhcC--C-
Confidence 9999999976 689999999999999999999999999999999999999999999998663 33343332 1
Q ss_pred CCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHH
Q 009517 334 GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYC 412 (533)
Q Consensus 334 ~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 412 (533)
....++|+++||||+| ++||+|+||+++ ++++++.+..... ...+.+.+.|.++..+|+++.
T Consensus 238 ---~~~~~vi~i~SfSK~~-~lpGlRiG~ii~---~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~---------- 300 (405)
T PRK06207 238 ---IDPENVITIMGPSKTE-SLSGYRLGVAFG---SPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPD---------- 300 (405)
T ss_pred ---CCcCcEEEEecchhhc-cCcccceEEEEc---CHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcH----------
Confidence 1123789999999999 899999999998 9999999988765 556778889999999986421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC
Q 009517 413 AERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG 492 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 492 (533)
.++++..+.++++++.+.+.|++++++.+..|+||+|+|++++.. ..++..++..+++++||.+.||..
T Consensus 301 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~-----------~~~~~~~~~~l~~~~gV~v~pG~~ 369 (405)
T PRK06207 301 GWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRL-----------AVSLHDFVKILRLQAGVIVTPGTE 369 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCccc-----------CCCHHHHHHHHHHhcCEEEeCchH
Confidence 223445666778889999999888789999999999999776410 012455666776788999999999
Q ss_pred CCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 493 FGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 493 f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
|+. .+.++|||+++.+.+++++++++|++++++++
T Consensus 370 F~~-~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 370 FSP-HTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred hCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 973 34569999999888999999999999987754
No 18
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-51 Score=422.89 Aligned_cols=351 Identities=19% Similarity=0.334 Sum_probs=297.3
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|+|+. .. ++.+++++.+.+.. ....|++..|.++||+++|+
T Consensus 31 ~i~l~~g~p~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~ 77 (384)
T PRK06348 31 IIDLSLGDPDL----------------------IT-------DESIINAAFEDAKK----GHTRYTDSGGDVELIEEIIK 77 (384)
T ss_pred cEEcCCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHH
Confidence 89999999874 11 56777766665543 35679999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++.+++|..+++++|++|+|+++++..++++++ ++||+|++++|+|.+|...+...|++++.+++.++++|.+|+++++
T Consensus 78 ~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 156 (384)
T PRK06348 78 YYSKNYDLSFKRNEIMATVGACHGMYLALQSIL-DPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLE 156 (384)
T ss_pred HHHHHhCCCCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHH
Confidence 999889999999999999999999999999998 8999999999999999999999999999999876668899999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+++ ++++|++++||||||.++|.+++++|+++|++++++||+||+|.++.|++. ..++..+. . .
T Consensus 157 ~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~-----~ 222 (384)
T PRK06348 157 ALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED--FVPMATLA-G-----M 222 (384)
T ss_pred HhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC--ccchhhcC-C-----C
Confidence 98875 789999999999999999999999999999999999999999999988542 33433331 1 1
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
..++|+++||||++ |+||+|+||+++ ++++++.+..... ..++++.++|.++..+|... .+++++
T Consensus 223 ~~~vi~~~SfSK~~-~l~GlRiG~~v~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----------~~~~~~ 288 (384)
T PRK06348 223 PERTITFGSFSKDF-AMTGWRIGYVIA---PDYIIETAKIINEGICFSAPTISQRAAIYALKHR----------DTIVPL 288 (384)
T ss_pred cCcEEEEecchhcc-CCccccceeeec---CHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc----------HHHHHH
Confidence 23689999999999 899999999998 9999999887765 56788999999999888532 244567
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
+++.++++++.+.+.|++++++.+..|+||||+|++++.+. + ++..++..+++++||.+.||+.|+. .
T Consensus 289 ~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~----------~-~~~~l~~~l~~~~gv~v~pg~~f~~-~ 356 (384)
T PRK06348 289 IKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTG----------L-SSVEFCEKLLKEAHVLVIPGKAFGE-S 356 (384)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCC----------C-CHHHHHHHHHHhCCEEEcCchhhcc-C
Confidence 88889999999999999887888899999999997764211 1 3455666777788999999999973 4
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
+.++|||+++.+++++++++++|+++
T Consensus 357 ~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 357 GEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 45699999998888999999998754
No 19
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.8e-51 Score=423.58 Aligned_cols=376 Identities=19% Similarity=0.252 Sum_probs=303.3
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++....++.+..+..+..+....+++ +|+|+.|+|+. +. |+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~p~~----------------------~~-------~~~ 49 (389)
T PRK08068 8 LLKQLPKQFFASLVAKVNKKVAEGHD---------VINLGQGNPDQ----------------------PT-------PEH 49 (389)
T ss_pred HhhhcCccHHHHHHHHHHHHHhcCCC---------eEEecCCCCCC----------------------CC-------CHH
Confidence 44455555555555655555443444 89999999874 21 466
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
+.+++.+.+... ....|+|..|.++||+++|+++.+.+|.+++++ +|++|+|+++++..++..++ ++||+|++++
T Consensus 50 ~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~-~~gd~vlv~~ 125 (389)
T PRK08068 50 IVEALQEAAENP---ANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLM-NPGDTILVPD 125 (389)
T ss_pred HHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhC-CCCCEEEEcC
Confidence 777777766542 256799999999999999999998889888888 89999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|..|...++..|++++.++++++.+|.+|++++++.++. ++++|++++||||||.++|.+++++|+++|++|
T Consensus 126 P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~ 199 (389)
T PRK08068 126 PGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKH 199 (389)
T ss_pred CCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 99999999999999999999998766889999999998865 689999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
+++||+||+|.++.|++. ...++... . +.+.++|+++||||+| |+||+|+||+++ ++++++.+.+...
T Consensus 200 ~~~ii~Deay~~~~~~~~-~~~s~~~~---~---~~~~~~i~~~S~SK~~-g~~GlRiG~~~~---~~~l~~~l~~~~~~ 268 (389)
T PRK08068 200 NIGVVHDFAYGAIGFDGQ-KPVSFLQT---P---GAKDVGIELYTLSKTF-NMAGWRVAFAVG---NESVIEAINLLQDH 268 (389)
T ss_pred CeEEEEehhhhhhccCCC-CCcChhhC---C---CccCCEEEEecchhcc-CCccceeEeEec---CHHHHHHHHHHHhh
Confidence 999999999999888652 22333222 1 1233579999999999 899999999998 9999999987765
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~ 461 (533)
...+.++..|.++..++.+. .++++.+++.++++++.+.+.|+++ |+.+.+|+||||+|++++..
T Consensus 269 ~~~~~~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~~~g~~~~~v~~~~~---- 333 (389)
T PRK08068 269 LFVSLFGAIQDAAIEALLSD----------QSCVAELVARYESRRNAFISACREI-GWEVDAPKGSFFAWMPVPKG---- 333 (389)
T ss_pred ccCCCChHHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCCC----
Confidence 33455556777777776432 1456778889999999999999998 88888999999999766421
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
.+...++..+++++||.+.||..|+ ..+.++|||+++.+++.+.+++++|++
T Consensus 334 --------~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~~~~~~l~~al~~l~~ 385 (389)
T PRK08068 334 --------YTSEQFADLLLEKAHVAVAPGNGFG-EHGEGYVRVGLLTDEERLREAVERIGK 385 (389)
T ss_pred --------CCHHHHHHHHHHhCCEEEecchHhC-ccCCCeEEEEEcCCHHHHHHHHHHHHH
Confidence 1345566677777899999999997 344569999999777778888888765
No 20
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3e-51 Score=421.63 Aligned_cols=378 Identities=22% Similarity=0.323 Sum_probs=314.6
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
+++..+.++++.++...+.+....+++ +++|+.|.|.. +. |+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~g~~~~----------------------~~-------~~ 48 (387)
T PRK08960 7 RRSRDIEPFHVMALLARANELEAAGHD---------VIHLEIGEPDF----------------------TT-------AE 48 (387)
T ss_pred hHHHhCCchHHHHHHHHHHHHHhcCCC---------eEEeCCCCCCC----------------------CC-------CH
Confidence 355556677777777777766665555 99999999874 22 68
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
.+.+++.+.+.. ....|.+..|.++||+++|+++++++|..+++++|++|+|+++++..++..++ ++||+|++++
T Consensus 49 ~v~~a~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~ 123 (387)
T PRK08960 49 PIVAAGQAALAA----GHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLV-DPGKHWLLAD 123 (387)
T ss_pred HHHHHHHHHHhc----CCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhc-CCCCEEEEcC
Confidence 888888887764 24579999999999999999999988988999999999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|+.+...+...|.+++.++++.+++|.+|++.+++.+++ +++++++++||||||.++|.+++++|+++|++|
T Consensus 124 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~ 197 (387)
T PRK08960 124 PGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRAR 197 (387)
T ss_pred CCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999998777889999999998876 688999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
|+++|+||+|.++.|++. ..++.. + + .++|+++||||.+ |++|+|+||+++ ++++++.+.+...
T Consensus 198 ~~~li~De~Y~~~~~~~~--~~~~~~----~---~--~~vi~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~~~~~~~~ 262 (387)
T PRK08960 198 GGHLVVDEIYHGLTYGVD--AASVLE----V---D--DDAFVLNSFSKYF-GMTGWRLGWLVA---PPAAVPELEKLAQN 262 (387)
T ss_pred CCEEEEEccccccccCCC--CCChhh----c---c--CCEEEEeeccccc-CCcccEEEEEEc---CHHHHHHHHHHHhh
Confidence 999999999999888542 233322 1 2 2589999999999 899999999998 9999999888765
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCCceeEEecccCCCHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC-NKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~gg~~~~~~~~~~~~~ 460 (533)
.+.+++.+.|.++..+|.+. ..++++++++.++++++.+.+.|+++ |+.+ ..|.||+|+|++++..
T Consensus 263 ~~~~~s~~~q~a~~~~l~~~---------~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~--- 329 (387)
T PRK08960 263 LYISASTPAQHAALACFEPE---------TLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISAF--- 329 (387)
T ss_pred hccCCCHHHHHHHHHHhhcC---------cHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEecccc---
Confidence 56778999999988888531 23556778889999999999999987 7664 5789999999776410
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
..++..++..+++++||.+.||+.|+...+.++|||+++.+.+++.+++++|.++++
T Consensus 330 --------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 330 --------GGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred --------CCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 013456667778889999999999975334459999999777888888888887764
No 21
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.9e-51 Score=422.70 Aligned_cols=369 Identities=21% Similarity=0.326 Sum_probs=295.0
Q ss_pred cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHH
Q 009517 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (533)
Q Consensus 97 ~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 176 (533)
+++|+|++|+|+.++.. ++ |+.+.+++.+.+... ....|++..|.++||+++
T Consensus 32 ~~~i~l~~G~p~~~~~~------------------~~-------p~~~~~a~~~~~~~~---~~~~Y~~~~G~~~lr~ai 83 (409)
T PLN00143 32 RLAISFGFGDPSCFECF------------------RT-------TNIAEDAIVEAVRSA---KFNSYAPTGGILPARRAI 83 (409)
T ss_pred CceeeCCCCCCCCCCCC------------------CC-------CHHHHHHHHHHHhCc---CCCCCCCCCCCHHHHHHH
Confidence 44999999999821111 22 678888888877652 246699999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHH
Q 009517 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (533)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~ 256 (533)
|+++.+++|..+++++|++|+|+++++..++++++ ++||.|++++|+|+.|...+...|++++.+++.++++|.+|+++
T Consensus 84 a~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 162 (409)
T PLN00143 84 ADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLA-RPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDA 162 (409)
T ss_pred HHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHc-CCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHH
Confidence 99999988988999999999999999999999998 89999999999999999999999999999999766689999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
|+++++. ++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++. ++.++..+
T Consensus 163 l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~~~~~~~------- 228 (409)
T PLN00143 163 VEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK-PFVPMGLF------- 228 (409)
T ss_pred HHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC-CCcchhhh-------
Confidence 9998865 789999999999999999999999999999999999999999999998653 33343332
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH------HHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV------REQIYKVASVNLCSNISGQILASLVMSPPKVGDESYES 410 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~------~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~ 410 (533)
.+..++|+++||||.| ++||+|+||+++.+ ++.+ ++.+.+.......++.+.|.++..+|.+.
T Consensus 229 ~~~~~vi~~~SfSK~f-~~pGlRvG~~v~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--------- 297 (409)
T PLN00143 229 ASIVPVITLGSISKRW-MIPGWGLGWLVTCD-PSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKT--------- 297 (409)
T ss_pred cccCcEEEEccchhhc-CCCccceEEEEeeC-chhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcC---------
Confidence 2334689999999998 89999999998721 2333 33343333333345788999999888532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc
Q 009517 411 YCAERDGILSSLARRAKTLEDAFNSLEGITC-NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP 489 (533)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p 489 (533)
...++++.++.++++++.+.+.|+++++..+ ..|+||+|+|++++. .. ..++.++..++.++++++||.+.|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~--~~-----~~~~~~~~~~~~~ll~~~gV~v~p 370 (409)
T PLN00143 298 TEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNL--LL-----LEDIEDDMEFCLKLAKEESLIILP 370 (409)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecch--hh-----cCCCCCHHHHHHHHHHhCCEEEeC
Confidence 1234566777888888899999988755443 478999999977641 00 001223556667888899999999
Q ss_pred CCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 490 GSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 490 g~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
|..|+. . ++|||+++.+++++++++++|+++++++.+
T Consensus 371 g~~f~~-~--~~iRi~~~~~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 371 GVTVGL-K--NWLRITFAVEQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred ccccCC-C--CeEEEEEcCCHHHHHHHHHHHHHHHHHhcc
Confidence 999973 3 399999998889999999999999987654
No 22
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.9e-51 Score=421.60 Aligned_cols=378 Identities=18% Similarity=0.324 Sum_probs=304.7
Q ss_pred ccccCccccccchHHHHHHHH-HHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQ-QELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
++...+.+++..+...+.+.. ..+++ +++|++|+|+. .. |+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~p~~----------------------~~-------~~ 44 (393)
T TIGR03538 3 NLSRLQPYPFEKLAALLAGVTPPASKP---------PIALSIGEPKH----------------------PT-------PA 44 (393)
T ss_pred hhhhCCccHHHHHHHHHHhhhhhcCCC---------eEEecCCCCCC----------------------CC-------CH
Confidence 344555556666666665553 23445 99999999885 22 57
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCC--CCCC-CEEEcCChHHHHHHHHHHhccCCCCe--
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP--ADPN-DIFLTDGASPAVHMMMQLLIRSENDG-- 217 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~--~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~-- 217 (533)
.+.+++.+.+.. ...|++..|.++||+++|+++.+++|++ ++++ +|++|+|+++++..++++++ ++||+
T Consensus 45 ~~~~a~~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~-~~gd~~~ 118 (393)
T TIGR03538 45 FVLEALRENLHG-----LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVI-NPGQAPL 118 (393)
T ss_pred HHHHHHHHHhhc-----cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHc-CCCCcce
Confidence 777777776543 5679999999999999999999988876 6775 79999999999999999998 89986
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|++++|+|..|...+...|++++.++++++++|.+|++++++++.+ ++++|++++||||||.+++.+++++|++
T Consensus 119 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~~ 192 (393)
T TIGR03538 119 VVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLIE 192 (393)
T ss_pred EEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHHH
Confidence 9999999999999999999999999998777899999999998876 7899999999999999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||++||+||+|.++.|++..+..+.......+.. +...++|+++||||.+ +++|+|+||+++ ++++++.+.
T Consensus 193 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~-~~~GlRvG~~i~---~~~l~~~~~ 267 (393)
T TIGR03538 193 LADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGR-DDFRRCLVFHSLSKRS-NLPGLRSGFVAG---DAEILKAFL 267 (393)
T ss_pred HHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccc-cccccEEEEecchhhc-CCcccceEEEec---CHHHHHHHH
Confidence 99999999999999999888643233333222222210 1234689999999998 789999999998 999999888
Q ss_pred Hhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCC
Q 009517 378 KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 378 ~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~ 456 (533)
+... ..++.+.+.|.++...+.. .+++++.++.++++++.+.+.|++. +.+..|+||+|+|++++.
T Consensus 268 ~~~~~~~~~~~~~~q~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~~~~~~ 334 (393)
T TIGR03538 268 RYRTYHGCAMPIPTQLASIAAWND-----------EQHVRENRALYREKFAAVLEILGQV--LDLELPDAGFYLWPKVPG 334 (393)
T ss_pred HHHHhhccCcCHHHHHHHHHHhcC-----------hHHHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeEEEEEECCC
Confidence 7765 4567888999988777742 2446778888999999999999875 456789999999977641
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-----CCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-----VPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
++..++..+++++||.+.||+.|+. ..+.++|||+++.+++++++++++|+++
T Consensus 335 --------------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 335 --------------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred --------------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 2345666777889999999999863 2345699999987889999999999875
No 23
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=7.4e-51 Score=420.89 Aligned_cols=368 Identities=21% Similarity=0.329 Sum_probs=302.5
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|+|+..... ++ |+.+.+++.+.+... ....|++..|..+||+++++
T Consensus 33 ~i~l~~G~p~~~~~~------------------~~-------~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~ 84 (409)
T PLN02656 33 VISLGMGDPTAYSCF------------------HT-------THVAQEAVVDALQSN---KFNGYAPTVGLPQARRAIAE 84 (409)
T ss_pred eeecCCCCCCcCCCC------------------CC-------CHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHH
Confidence 999999999831100 21 678888888777652 25689999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++++.+|..+++++|++|+|+++++..++.+++ ++||+|++++|+|+.|...+...|++++.++++++++|.+|++.++
T Consensus 85 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~ 163 (409)
T PLN02656 85 YLSRDLPYKLSLDDVFITSGCTQAIDVALSMLA-RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVE 163 (409)
T ss_pred HHHHhcCCCCCcccEEEeCChHHHHHHHHHHHh-CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHH
Confidence 999988988999999999999999999999998 8999999999999999999999999999999976668899999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+++++ ++++|++++||||||.+++.+++++|+++|++|+++||+||+|.+|.|++. ++.++..+ +.
T Consensus 164 ~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-------~~ 229 (409)
T PLN02656 164 ALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN-PFVPMGVF-------GS 229 (409)
T ss_pred HHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC-CcccHHHh-------cc
Confidence 98876 789999999999999999999999999999999999999999999998653 33444333 23
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecC-----CHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGF-----SAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~-----~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
..++|+++||||+| ++||+|+||+++.+. ++++++.+.+......+++.+.|.++..+|++.. ..
T Consensus 230 ~~~vi~~~SfSK~f-~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~---------~~ 299 (409)
T PLN02656 230 IVPVLTLGSLSKRW-IVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD---------ES 299 (409)
T ss_pred cCcEEEEcccchhc-cCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc---------HH
Confidence 44689999999998 789999999997210 2578888877655445678999999999986421 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC
Q 009517 414 ERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG 492 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 492 (533)
++++.+++++++++.+.+.|++++++. +..|+||||+|++++.+. ..+..++..++.++++++||.+.||+.
T Consensus 300 ~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~-------~~~~~~~~~~~~~~l~~~gV~v~pg~~ 372 (409)
T PLN02656 300 FFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSL-------LEDISDDIDFCFKLAREESVIILPGTA 372 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhh-------cCCCCCHHHHHHHHHHhCCEEEecchh
Confidence 467778889999999999999885554 368999999998764210 001123445666888899999999999
Q ss_pred CCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 493 FGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 493 f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
|+. . ++|||+++.+++++++++++|++++.+..+
T Consensus 373 fg~-~--~~iRi~~~~~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 373 VGL-K--NWLRITFAADPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred cCC-C--CeEEEEeCCCHHHHHHHHHHHHHHHHHhcc
Confidence 973 3 399999998889999999999999887654
No 24
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-51 Score=419.64 Aligned_cols=377 Identities=22% Similarity=0.338 Sum_probs=308.7
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
+++....+++...+...++++...+++ +++|+.|+|+. .. |+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~-------~~ 47 (385)
T PRK09276 6 DRIKNLPPYLFAEIDKKKAEKIARGVD---------VISLGIGDPDL----------------------PT-------PD 47 (385)
T ss_pred hHhhhCCccHHHHHHHHHHHHHhcCCC---------EEEecCCCCCC----------------------CC-------CH
Confidence 345555566555666666666666666 99999999874 22 56
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
.+.+++.+.+... ....|++..|.++||+++++++++.+|.+++++ +|++|+|+++++..+++.++ ++||+|+++
T Consensus 48 ~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~-~~gd~Vl~~ 123 (385)
T PRK09276 48 HIIEAMCKAVEDP---ENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFV-NPGDVVLVP 123 (385)
T ss_pred HHHHHHHHHHhCC---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-CCCCEEEEc
Confidence 7777777776542 246799999999999999999998889888887 59999999999999999998 899999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~ 301 (533)
+|+|+.|...++..|.+++.++++.+.+|.+|++++++.+.. ++++|++++||||||.+++.+++++|+++|++
T Consensus 124 ~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~ 197 (385)
T PRK09276 124 DPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKK 197 (385)
T ss_pred CCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998766788999999988865 78999999999999999999999999999999
Q ss_pred cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh
Q 009517 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (533)
Q Consensus 302 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~ 381 (533)
||++||+||+|.++.|++. ...++..+. ....++|+++||||.| |++|+|+||+++ ++++++.+.+...
T Consensus 198 ~~~~ii~De~y~~~~~~~~-~~~~~~~~~------~~~~~~i~~~S~SK~~-g~~GlRiG~~i~---~~~l~~~~~~~~~ 266 (385)
T PRK09276 198 YDIIVCHDAAYSEIAYDGY-KPPSFLEVP------GAKDVGIEFHSLSKTY-NMTGWRIGFAVG---NADLIAGLGKVKS 266 (385)
T ss_pred CCcEEEEecchhheecCCC-CCCChhccC------CCcCCEEEEecchhhc-CCcchhheeeeC---CHHHHHHHHHHHh
Confidence 9999999999999888643 234433321 1123579999999999 899999999998 9999999988765
Q ss_pred -ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 382 -VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 382 -~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
...+.+.+.|.++..+|.+. ..++++++++++++++.+.+.|+++ |+.+..|+||+|+|++++..
T Consensus 267 ~~~~~~~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~v~~~~~--- 332 (385)
T PRK09276 267 NVDSGVFQAIQEAGIAALNGP----------QEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFYVWAPVPKG--- 332 (385)
T ss_pred hccCCCCHHHHHHHHHHHcCc----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEECCCC---
Confidence 44567778888888888531 2456778889999999999999998 88888999999999776411
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
.+...++.++++++||.+.||..|+. .+.++|||+++.+++++.+++++|.+
T Consensus 333 ---------~~~~~l~~~ll~~~gi~v~~g~~f~~-~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 ---------YTSAEFATLLLDKAGVVVTPGNGFGE-YGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred ---------CCHHHHHHHHHHhCCEEECCchhhCC-CCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 13455667777788999999999973 44569999999777888888888764
No 25
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=7.7e-51 Score=420.24 Aligned_cols=387 Identities=21% Similarity=0.314 Sum_probs=309.2
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++..+..+++..+...+.+....|++ +|+|+.|+|+. +. |+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~p~~----------------------~~-------~~~ 47 (405)
T PRK09148 6 RIRRLPPYVFEQVNRLKAAARAAGAD---------IIDLGMGNPDL----------------------PT-------PQH 47 (405)
T ss_pred hhhcCCccHHHHHHHHHHHHHhcCCC---------eEEcCCCCCCC----------------------CC-------CHH
Confidence 34445555555555555555554555 89999999874 21 577
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
+++++.+.+... ....|++..|.++||+++|+++++++|.+++++ +|++|+|+++++..++..++ ++||+|++++
T Consensus 48 ~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vl~~~ 123 (405)
T PRK09148 48 IVDKLCETAQDP---RTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAIT-APGDVILCPN 123 (405)
T ss_pred HHHHHHHHHcCc---ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhc-CCCCEEEEcC
Confidence 788877666431 357899999999999999999998889888887 89999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|+.|...+...|++++.++++.+++|-.+ +++.++.. .+++++|++++||||||.++|.+++++|+++|++|
T Consensus 124 P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~---l~~~~~~~---~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~ 197 (405)
T PRK09148 124 PSYPIHAFGFIMAGGVIRSVPAEPDEEFFPA---LERAVRHS---IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKH 197 (405)
T ss_pred CCCcccHHHHHhcCCEEEEEeCCCCCCCccC---HHHHHhhc---cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 9999999999999999999999876555444 44444321 12789999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
+++||+||+|.++.|++. +..++..+ .. ....+|+++||||.+ |+||+|+||+++ ++++++.+.+...
T Consensus 198 ~~~ii~De~Y~~~~~~~~-~~~s~~~~-~~-----~~~~~i~~~SfSK~~-~~pGlR~G~~v~---~~~~i~~l~~~~~~ 266 (405)
T PRK09148 198 DIIILSDLAYSEIYFDGN-PPPSVLQV-PG-----AKDVTVEFTSMSKTF-SMAGWRMGFAVG---NERLIAALTRVKSY 266 (405)
T ss_pred CeEEEEeccchhhhcCCC-CCCChhhC-CC-----ccCcEEEEecccccc-CCcchheeeeeC---CHHHHHHHHHHHHH
Confidence 999999999999988542 34444332 11 123578899999999 899999999998 9999999988775
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~ 461 (533)
..++++.+.|.++..+|++++ ++++++++.++++++.+.+.|+++ |+.+..|+||+|+|++++....
T Consensus 267 ~~~~~~~~~q~~~~~~L~~~~----------~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~~-- 333 (405)
T PRK09148 267 LDYGAFTPIQVAATAALNGPQ----------DCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIPEAFR-- 333 (405)
T ss_pred hccCCChHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECCCccC--
Confidence 467788999999999986422 456778889999999999999987 8888889999999977642100
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
..++..++..+++++||.+.||..|+ ..+.++|||+++.+.+.+.+++++|.++++++.+.
T Consensus 334 -------~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~~~ 394 (405)
T PRK09148 334 -------HLGSLEFSKLLVEKADVAVAPGVGFG-EHGDGYVRIALVENEQRIRQAARNIKRFLSSADET 394 (405)
T ss_pred -------CCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 01245666777878999999999997 33455999999988889999999999999887654
No 26
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-51 Score=421.38 Aligned_cols=390 Identities=21% Similarity=0.339 Sum_probs=317.7
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
+++....+.....+...+++....+.+ +++|+.|.|.. +. |+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~g~p~~----------------------~~-------~~ 49 (402)
T PRK06107 8 ARVSRIKPSPSTAAAARARELRAAGRS---------IVDLTVGEPDF----------------------DT-------PD 49 (402)
T ss_pred HHhhhcCccHHHHHHHHHHHHHhccCC---------EEEcCCCCCCC----------------------CC-------CH
Confidence 344444444444455556666544444 99999999884 21 56
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
.+.+++.+.+.. ....|++..|.++||+++++++.+.+|..+++++|++|+|+++|+..++..++ ++||+|++++
T Consensus 50 ~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vl~~~ 124 (402)
T PRK06107 50 HIKQAAVAAIER----GETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATL-EAGDEVIIPA 124 (402)
T ss_pred HHHHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEec
Confidence 777777777764 25679999999999999999999888988899999999999999999999887 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|..|...+...+..++.++++.+++|.+|++.+++++++ ++++|++++|+||||.++|.+++++|+++|+++
T Consensus 125 p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~ 198 (402)
T PRK06107 125 PYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRH 198 (402)
T ss_pred CCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999887666788999999998865 789999999999999999999999999999998
Q ss_pred -CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh
Q 009517 303 -GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (533)
Q Consensus 303 -~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~ 381 (533)
++++|+||+|.++.|++. +..++..+..++ ..++|+++||||.| |+||+|+||+++ ++++++.+.....
T Consensus 199 ~~~~iI~De~y~~l~~~~~-~~~~~~~~~~~~-----~~~vi~~~S~SK~~-~~pGlRiG~~~~---~~~~~~~~~~~~~ 268 (402)
T PRK06107 199 PHVLVLTDDIYDHIRFDDE-PTPHLLAAAPEL-----RDRVLVTNGVSKTY-AMTGWRIGYAAG---PADLIAAINKLQS 268 (402)
T ss_pred CCeEEEEehhccccccCCC-CCCCHHHhCcCc-----cCCEEEEeccchhh-cCcccceeeeec---CHHHHHHHHHHHH
Confidence 999999999999988653 445555442221 23689999999999 899999999998 9999999988876
Q ss_pred -ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 382 -VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 382 -~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
...+++.+.|.++..+|.... .+++..++.|+++++.+.+.|++++|+.+.+|+||||+|++++.-
T Consensus 269 ~~~~~~s~~~q~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~--- 335 (402)
T PRK06107 269 QSSSCPSSISQAAAAAALNGDQ----------SFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGL--- 335 (402)
T ss_pred hcccCCChHHHHHHHHHhcCCh----------HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccc---
Confidence 567899999999999996422 346778888999999999999988789999999999999876310
Q ss_pred HHHHHhcC--CCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 461 IKAAEAEK--TVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 461 ~~~~~~~~--~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+.....+ ..++..++..+++++||.+.||..|+. .+ +|||+++.+++++++++++|+++++++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~-~~--~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 336 IGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL-SP--YFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred cccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC-CC--eEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 00000001 124556777888889999999999984 33 999999988999999999999988764
No 27
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-51 Score=419.57 Aligned_cols=376 Identities=20% Similarity=0.308 Sum_probs=304.1
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++..+.++....+...+...+..|++ +|+|+.|+|.. +. |..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~g~p~~----------------------~~-------p~~ 52 (394)
T PRK05942 11 RLQALPPYVFARLDELKARAREQGLD---------LIDLGMGNPDG----------------------AA-------PQP 52 (394)
T ss_pred hhccCCCcHHHHHHHHHHHHHhcCCC---------eEEcCCCCCCC----------------------CC-------CHH
Confidence 44444444444445555555555555 99999999874 11 577
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
+++++.+.+... ....|++..|.++||+++|+++++++|.+++++ +|++|+|+++++..++..++ ++||+|++++
T Consensus 53 ~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~-~~gd~Vlv~~ 128 (394)
T PRK05942 53 VIEAAIAALADP---QNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYV-NPGDVVLVPS 128 (394)
T ss_pred HHHHHHHHHhCC---CCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhC-CCCCEEEEcC
Confidence 888877766531 256899999999999999999998889888888 48999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|+.+...+...|++++.++++.+++|.+|++++++.+.+ ++++|++++||||||.++|.+++++|+++|+++
T Consensus 129 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~ 202 (394)
T PRK05942 129 PAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARKY 202 (394)
T ss_pred CCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 99999999999999999999998777889999999998876 799999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
|++||+||+|.++.|++. ...++..+ .. ....+|+++||||.| |++|+|+||+++ ++++++.+.....
T Consensus 203 ~~~iI~De~y~~~~~~~~-~~~~~~~~-~~-----~~~~~i~~~SfSK~~-~~~GlRiG~i~~---~~~l~~~l~~~~~~ 271 (394)
T PRK05942 203 EIMLVHDLCYAELAFDGY-QPTSLLEI-PG-----AKDIGVEFHTLSKTY-NMAGWRVGFVVG---NRHIIQGLRTLKTN 271 (394)
T ss_pred CeEEEEeccchhhccCCC-CCCChhhC-CC-----ccccEEEEecchhcc-CChhhheeeeec---CHHHHHHHHHHHhh
Confidence 999999999999988653 23343332 11 122578899999999 899999999998 9999999987765
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~ 461 (533)
..++.+.+.|.++..+|+.. .+++++++++++++++.+.+.|++. |+.+..|+||+|+|++++..
T Consensus 272 ~~~~~~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~~~~---- 336 (394)
T PRK05942 272 LDYGIFSALQKAAETALQLP----------DSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPCPVG---- 336 (394)
T ss_pred cccCCCHHHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEECCCC----
Confidence 45778888999998888531 2456778889999999999999988 88888999999999776521
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
. ++..++.++++++||.+.||..|+ ..+.++|||+++.+.+.+.+++++|.+
T Consensus 337 -------~-~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~~~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 337 -------M-GSTDFALNVLQKTGVVVTPGNAFG-EGGEGYVRISLIADCDRLGEALDRLKQ 388 (394)
T ss_pred -------C-CHHHHHHHHHHHCCEEEeCChhhC-cCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 1 234556678888999999999997 344569999998655666666666654
No 28
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=7e-51 Score=418.60 Aligned_cols=376 Identities=22% Similarity=0.341 Sum_probs=307.2
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++.....+.+..+.+.+++..+.+++ +++|+.|+|+. .. |+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~~~----------------------~~-------~~~ 46 (383)
T TIGR03540 5 RIENLPPYLFAEIDKKKAEKKAEGVD---------VISLGIGDPDL----------------------PT-------PKH 46 (383)
T ss_pred hhccCChhHHHHHHHHHHHHHhcCCC---------eEEeCCCCCCC----------------------CC-------CHH
Confidence 34444444444555666666665555 99999999874 21 567
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
+.+++.+.+... ....|++..|.++||+++|+++++.+|.+++++ +|++|+|+++++..+++.++ ++||+|++++
T Consensus 47 ~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~-~~gd~vlv~~ 122 (383)
T TIGR03540 47 IVEALCKAAENP---ENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFV-NPGDIVLVPD 122 (383)
T ss_pred HHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhC-CCCCEEEEeC
Confidence 777777766532 256899999999999999999998889888876 69999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|+.|..+++..|++++.+|++.+++|.+|++++++++.+ ++++|++++||||||.++|.+++++|+++|++|
T Consensus 123 P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~ 196 (383)
T TIGR03540 123 PGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEY 196 (383)
T ss_pred CCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999998776788999999998865 799999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
|++||+||+|.++.|++. ...++..+. ....++|++.||||.| |++|+|+||+++ ++++++.+.....
T Consensus 197 ~~~ii~De~y~~l~~~~~-~~~~~~~~~------~~~~~~i~~~SfSK~~-g~~GlRiG~~i~---~~~l~~~~~~~~~~ 265 (383)
T TIGR03540 197 NIIVCHDNAYSEITFDGY-KAPSFLEVD------GAKDVGIEFHSLSKTY-NMTGWRIGMAVG---NADLIAGLGKVKTN 265 (383)
T ss_pred CEEEEEecchhhhccCCC-CCcCcccCC------CcccCEEEEEeccccc-CCccceeeEEeC---CHHHHHHHHHHHHh
Confidence 999999999999988542 233433321 1123579999999999 899999999997 9999998887765
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~ 461 (533)
...+++.+.|.++..+|++. .++++++++.++++++.+.+.|++. |+.+..|++|+|+|++++. +
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~~--~-- 330 (383)
T TIGR03540 266 VDSGVFQAIQYAAIAALNGP----------QDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVPE--G-- 330 (383)
T ss_pred cccCCChHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECCC--C--
Confidence 44667788899998888643 2456677888999999999999998 8999999999999977641 1
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
+ +...++.++++++||.+.||..|+. .+.++|||+++.+++++++++++|++
T Consensus 331 -------~-~~~~~~~~ll~~~gi~v~~g~~f~~-~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 -------Y-TSAEFAARLLEETGVVVTPGVGFGE-YGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred -------C-CHHHHHHHHHHHCCEEEecchhhCc-cCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 1 2455677777889999999999973 34559999999777888888888764
No 29
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.2e-50 Score=419.37 Aligned_cols=392 Identities=29% Similarity=0.506 Sum_probs=310.3
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
+++..+.++.+.++...+++....|++ +|+|++|+|...+. +. |+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~g~p~~~~~-------------------~~-------~~ 52 (404)
T PRK09265 8 SKLENVCYDIRGPVLKEAKRLEEEGHK---------ILKLNIGNPAPFGF-------------------EA-------PD 52 (404)
T ss_pred HHHHhcCcchhHHHHHHHHHHHHcCCC---------eEEecCCCCCcCCC-------------------CC-------CH
Confidence 455566777777777887777665555 99999999963221 11 67
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
.+++++.+.+.. ...|++..|.++||+++|+++.++.+..+++++|++|+|+++++..+++.++ ++||+|++++
T Consensus 53 ~i~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~ 126 (404)
T PRK09265 53 EILRDVIRNLPT-----AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALL-NNGDEVLVPA 126 (404)
T ss_pred HHHHHHHHHhhc-----CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhC-CCCCEEEEeC
Confidence 888888776643 4579999999999999999998655446889999999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|..|...+...|++++.++++.+++|.+|++++++++++ ++++|++++||||||.+++.+++++|+++|+++
T Consensus 127 p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~ 200 (404)
T PRK09265 127 PDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQH 200 (404)
T ss_pred CCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHC
Confidence 99999999999999999999887666788999999998866 789999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH----HHHHHHH
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VREQIYK 378 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~----~~~~l~~ 378 (533)
|++||+||+|.++.|++. +..++..+ .++.++|+++||||++ |+||+|+||+++. .+++ +++.+..
T Consensus 201 ~~~ii~De~y~~~~~~~~-~~~~~~~~-------~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~-~~~~~~~~~~~~~~~ 270 (404)
T PRK09265 201 NLIIFADEIYDKILYDGA-VHISIASL-------APDLLCVTFNGLSKAY-RVAGFRVGWMVLS-GPKKHAKGYIEGLDM 270 (404)
T ss_pred CCEEEEehhhhhccCCCC-CcCCHHHc-------CCCceEEEEecchhhc-cCcccceEEEEEe-CchHHHHHHHHHHHH
Confidence 999999999999988653 34454443 3445789999999999 8899999999962 1343 4444433
Q ss_pred hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCH
Q 009517 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPE 458 (533)
Q Consensus 379 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~ 458 (533)
.....++++.++|.++..+|.+.+ +.++.....+++.++++.+.+.|++++|+.++.|+||+|+|++++...
T Consensus 271 ~~~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~ 342 (404)
T PRK09265 271 LASMRLCANVPAQHAIQTALGGYQ--------SINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKV 342 (404)
T ss_pred HhccccCCCcHHHHHHHHHhcCch--------hHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccc
Confidence 333457889999999999986422 111122223457778899999999888899999999999997765210
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 459 KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.+..++..++.+++.++||.+.||..|+. .+.++|||+++.+++++++++++|+++++.+.
T Consensus 343 --------~~~~~~~~~~~~~l~~~gv~v~pg~~F~~-~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 343 --------YPIHDDEQFVLDLLLQEKVLLVQGTGFNW-PEPDHFRIVTLPRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred --------cCCCCHHHHHHHHHHhCCEEEECchhhCC-CCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhc
Confidence 01113445566788899999999999973 33459999999888999999999999887653
No 30
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=4e-51 Score=419.66 Aligned_cols=354 Identities=25% Similarity=0.453 Sum_probs=299.8
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|+|+. +. ++.+.+++.+.+.. ....|++..|.++||+++|+
T Consensus 22 ~i~l~~~~~~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~ 68 (378)
T PRK07682 22 VISLGVGEPDF----------------------VT-------PWNVREASIRSLEQ----GYTSYTANAGLLELRQEIAK 68 (378)
T ss_pred eEEeCCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHH
Confidence 89999999985 21 45667777666653 25679999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++++|+.++++ +|++|+|+++|+..+++.++ ++||+|++++|+|+.|...++..|.+++.++++.+++|++|++++
T Consensus 69 ~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 147 (378)
T PRK07682 69 YLKKRFAVSYDPNDEIIVTVGASQALDVAMRAII-NPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQI 147 (378)
T ss_pred HHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHH
Confidence 9999889888876 79999999999999999998 899999999999999999999999999999987666789999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++.+ ++++|++++||||||.++|.+++++|+++|++|++++|+||+|.++.|++. +.++..+. +
T Consensus 148 ~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~----- 213 (378)
T PRK07682 148 EAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA--YTSFASIK-G----- 213 (378)
T ss_pred HhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC--CCChhhcc-c-----
Confidence 999876 789999999999999999999999999999999999999999999998652 33433321 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
.+.++|++.||||.| |+||+|+||+++ ++++++.+.+... ..++++.+.|.++..+|++.. .+++
T Consensus 214 ~~~~~i~~~S~SK~~-~~~GlR~G~~~~---~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~----------~~~~ 279 (378)
T PRK07682 214 MRERTILISGFSKGF-AMTGWRLGFIAA---PVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGN----------DDVI 279 (378)
T ss_pred ccCCEEEEecCcccc-cChhhhhhhhhc---CHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh----------HHHH
Confidence 123689999999999 899999999998 9999999987765 557788999999999996532 3357
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
.+++.++++++.+.+.|+++ |+.+..|+|+||+|+.+.... . ++..++..+++++||.+.||..|+ .
T Consensus 280 ~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~~----------~-~~~~~~~~ll~~~gv~v~pg~~f~-~ 346 (378)
T PRK07682 280 RMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISSTG----------L-SSEEFAEQLLLEEKVAVVPGSVFG-E 346 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCCC----------C-CHHHHHHHHHHhCCEEEcCchhhC-c
Confidence 78889999999999999998 888899999999997654111 1 345566777778899999999997 3
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+.+++||+++.+++++++++++|+++++++
T Consensus 347 ~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 347 SGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 4456999999987889999999999988764
No 31
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.9e-50 Score=416.24 Aligned_cols=361 Identities=23% Similarity=0.385 Sum_probs=295.0
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|++|.|+..+. ...++.+.+++.+.+... ....|.+..|..+||+++|+
T Consensus 33 ~i~l~~g~p~~~~~-------------------------~~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~aia~ 84 (401)
T TIGR01264 33 MIKLSIGDPTVFGN-------------------------LPTDPEVMQAMKDSLDSG---KYNGYAPTVGALSAREAIAS 84 (401)
T ss_pred eeecCCCCCCCcCC-------------------------CCCCHHHHHHHHHHHhcc---CCCCCCCCCCCHHHHHHHHH
Confidence 89999999962110 111577777777776642 24579999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++++ .+..+++++|++|+|+++++..++.+++ ++||+|++++|+|..|...++..|++++.++++.+++|++|++.++
T Consensus 85 ~~~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~ 162 (401)
T TIGR01264 85 YYHN-PDGPIEADDVVLCSGCSHAIEMCIAALA-NAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLE 162 (401)
T ss_pred HHhh-cCCCCCHHHEEECcChHHHHHHHHHHhC-CCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHH
Confidence 9986 4666889999999999999999999998 7999999999999999999999999999999877667899999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+++ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.+|.|++. .+.++..+ ++
T Consensus 163 ~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-------~~ 228 (401)
T TIGR01264 163 SLIDE------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA-TFEPLASL-------SS 228 (401)
T ss_pred HHhcc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc-ccccHHHc-------CC
Confidence 98876 689999999999999999999999999999999999999999999988653 34444443 34
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCH------HHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSA------EVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYC 412 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~------~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 412 (533)
+.++|+++||||+| ++||+|+||+++ ++ ++++.+.......++++.+.|.++..+|.+. ..
T Consensus 229 ~~~vi~~~SfSK~~-~~~GlRiG~iv~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---------~~ 295 (401)
T TIGR01264 229 TVPILSCGGLAKRW-LVPGWRLGWIII---HDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT---------PQ 295 (401)
T ss_pred CCcEEEEccCcccC-CCccceEEEEEe---cCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC---------cH
Confidence 44689999999998 899999999998 42 3555555544345678899999999888531 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC
Q 009517 413 AERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG 492 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 492 (533)
++++++++.++++++.+.+.|++++|+.+..|+||+|+|++++... ..+..++..++..+++++||++.||..
T Consensus 296 ~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~-------~~~~~~~~~~~~~l~~~~gI~v~pg~~ 368 (401)
T TIGR01264 296 EYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEH-------FPEFKNDVEFTERLVAEQSVFCLPGSC 368 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccc-------cCCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 5567788889999999999999987888889999999998765210 001113456677777789999999999
Q ss_pred CCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 493 FGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 493 f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
|+ .++ ++||+++.+++++++++++|.+++++
T Consensus 369 f~-~~~--~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 369 FE-YPG--FFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred cC-CCC--eEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 97 343 99999997788999999999998865
No 32
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.9e-50 Score=414.61 Aligned_cols=381 Identities=25% Similarity=0.349 Sum_probs=309.5
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
+++....++.+.++...+.+.+..+++ +++|+.|.|+. +. |+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~-------~~ 46 (388)
T PRK07337 5 ARVDAIEPFYVMELAKEAQALERAGRD---------IIHMGIGEPDF----------------------TA-------PE 46 (388)
T ss_pred hHhHhcCchHHHHHHHHHHHHHhcCCC---------EEEeCCcCCCC----------------------CC-------CH
Confidence 344445555555566666666554444 99999999874 21 56
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
.+.+++.+.+.. ....|++..|.++||+++|+++++.+|+.+++++|++|+|+++|+..++..++ ++||+|++++
T Consensus 47 ~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~ 121 (388)
T PRK07337 47 PVVEAAARALRR----GVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALV-ERGDEVLMPD 121 (388)
T ss_pred HHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhc-CCCCEEEEeC
Confidence 778877777654 25679999999999999999999988988999999999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|..+...+...|++++.++++.+++|++|++++++.+++ ++++|++++||||||.+++.+++++|+++|+++
T Consensus 122 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~ 195 (388)
T PRK07337 122 PSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGVLLASPSNPTGTSIAPDELRRIVEAVRAR 195 (388)
T ss_pred CCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHC
Confidence 99999999999999999999998767899999999998876 789999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
++++|+||+|.++.|.+. ..++.. + +.++|++.||||.+ |++|+|+||+++ ++++++.+.+...
T Consensus 196 ~~~ii~De~y~~~~~~~~--~~~~~~----~-----~~~vi~~~S~SK~~-~~~G~RiG~~~~---~~~l~~~l~~~~~~ 260 (388)
T PRK07337 196 GGFTIVDEIYQGLSYDAA--PVSALS----L-----GDDVITINSFSKYF-NMTGWRLGWLVV---PEALVGTFEKLAQN 260 (388)
T ss_pred CCEEEEeccccccccCCC--CcChhh----c-----cCCEEEEEechhhc-CCchhheeeeec---CHHHHHHHHHHHHH
Confidence 999999999999888543 223222 1 12589999999999 899999999998 8999998887764
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCCceeEEecccCCCHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC-NKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~gg~~~~~~~~~~~~~ 460 (533)
...+.+.+.|.++..++.+.. + .+.++.++.++++++.+.+.|+++ |+.+ ..|+||+|+|++++...
T Consensus 261 ~~~~~s~~~q~~~~~~l~~~~-----~----~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~-- 328 (388)
T PRK07337 261 LFICASALAQHAALACFEPDT-----L----AIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVA-- 328 (388)
T ss_pred hccCCChHHHHHHHHHhccCc-----h----HHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEeccccc--
Confidence 456788999999988886321 1 234567888999999999999997 7664 57899999998765100
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
..+..++.+++.++++++||.+.||..|+...+.++|||+++.+++.|++++++|.+++
T Consensus 329 -----~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 329 -----HPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred -----CCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 00112355667778888999999999998544456999999977888999999998764
No 33
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-50 Score=414.32 Aligned_cols=354 Identities=26% Similarity=0.408 Sum_probs=299.7
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|+|+. +. |+.+.+++.+.+.+ ....|++..|.++||+++++
T Consensus 26 ~i~l~~g~~~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~la~ 72 (382)
T PRK06108 26 VLPLWFGESDL----------------------PT-------PDFIRDAAAAALAD----GETFYTHNLGIPELREALAR 72 (382)
T ss_pred eEEecCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHH
Confidence 89999999875 22 57788887777765 24569999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCC-CCCCCCHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~ld~~~l 257 (533)
++.+.+|..+++++|++|+|+++++..++..++ ++||+|++++|+|..|...++..|++++.++++.+ .+|.+|++.+
T Consensus 73 ~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l 151 (382)
T PRK06108 73 YVSRLHGVATPPERIAVTSSGVQALMLAAQALV-GPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRL 151 (382)
T ss_pred HHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHH
Confidence 999888988899999999999999999999998 79999999999999999999999999999999753 4688999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++.+++ ++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.|++.....++..+. .
T Consensus 152 ~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~------~ 219 (382)
T PRK06108 152 LAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIA------E 219 (382)
T ss_pred HHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcC------C
Confidence 998875 7899999999999999999999999999999999999999999999886222333333321 2
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
.+.++|++.||||.| |++|+|+||+++ ++++++.+.+... ...+++.+.|.++..+|.+. .++++
T Consensus 220 ~~~~~i~~~S~SK~~-g~~G~RiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~----------~~~~~ 285 (382)
T PRK06108 220 PDDRIIFVNSFSKNW-AMTGWRLGWLVA---PPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG----------EDFVA 285 (382)
T ss_pred CcCCEEEEeechhhc-cCcccceeeeeC---CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC----------hHHHH
Confidence 234689999999998 889999999998 8999999887765 55778999999999988643 24456
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
+++++++++++.+.+.|++++|+.+..|+||+|+|++++.. .+...++..+++++||.+.||..|+ .
T Consensus 286 ~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~------------~~~~~~~~~ll~~~gV~v~pg~~f~-~ 352 (382)
T PRK06108 286 ELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGV------------TDSLALAKRLVDEAGLGLAPGTAFG-P 352 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCC------------CCHHHHHHHHHHhCCEEEeCchhhC-C
Confidence 77888999999999999988889999999999999766411 1345667777788999999999997 4
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
.+.++||||++.+++++++++++|+++++
T Consensus 353 ~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 353 GGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred CCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 44569999998888899999999998764
No 34
>PRK07324 transaminase; Validated
Probab=100.00 E-value=7.1e-51 Score=415.89 Aligned_cols=344 Identities=22% Similarity=0.345 Sum_probs=295.9
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++++|++|+|++ .+ |+.+ +++.+++.+ ....|++..|.++||+++|
T Consensus 27 ~~~~~~~~e~~~----------------------~~-------~~~~-~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia 72 (373)
T PRK07324 27 CIDSLTLEELLA----------------------LA-------GKNP-EAFYQELGQ----KKLTYGWIEGSPEFKEAVA 72 (373)
T ss_pred CCCCCcHHHHHh----------------------cc-------Ccch-HHHHHHHhc----CCccCCCCCCCHHHHHHHH
Confidence 399999999985 33 4556 777777765 3568999999999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
+++.. +++++|++|+|+++++..++..++ ++||+|+++.|+|..+...++..|++++.++++.+++|.+|++.+
T Consensus 73 ~~~~~-----~~~~~vi~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l 146 (373)
T PRK07324 73 SLYQN-----VKPENILQTNGATGANFLVLYALV-EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDEL 146 (373)
T ss_pred HHhcC-----CChhhEEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 99852 678999999999999999999998 899999999999999999999999999999998877889999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++.+++ ++|+|++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++... .
T Consensus 147 ~~~~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~s~~~~-------~ 211 (373)
T PRK07324 147 RRLVRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS--TPSIADL-------Y 211 (373)
T ss_pred HHhCCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--CCChhhc-------c
Confidence 988865 789999999999999999999999999999999999999999999888542 3343332 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
+ ++|+++||||++ |++|+|+||+++ ++++++.+.+.+. .+.+++.+.|.++..+|+. ....++
T Consensus 212 ~--~~I~~~s~SK~~-~~~G~RiG~i~~---~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~----------~~~~l~ 275 (373)
T PRK07324 212 E--KGISTNSMSKTY-SLPGIRVGWIAA---NEEVIDILRKYRDYTMICAGVFDDMLASLALEH----------RDAILE 275 (373)
T ss_pred C--CEEEEecchhhc-CCccceeEEEec---CHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC----------HHHHHH
Confidence 2 468999999999 899999999998 9999999998876 5678889999999888863 234567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
++++.++++++.+.+.|++.+++.++.|+||+|+|+.++.+ .++..++.++++++||.+.||+.|+.
T Consensus 276 ~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~------------~~~~~~~~~ll~~~gv~v~pg~~F~~- 342 (373)
T PRK07324 276 RNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD------------MPSEDFCLKLLKETGVLLVPGNRFDL- 342 (373)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC------------CCHHHHHHHHHHhcCEEEECccccCC-
Confidence 78888999999999999888789999999999999877633 13566788888889999999999984
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
++ +|||+++.+++.+++++++|+++++++
T Consensus 343 ~~--~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 343 EG--HVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CC--eEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 44 999999988899999999999998764
No 35
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.3e-50 Score=418.47 Aligned_cols=346 Identities=21% Similarity=0.337 Sum_probs=283.1
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCC--CCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH-HhC
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGF--PADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~--~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~-~~g 236 (533)
...|++..|.++||+++|+++++++|. ++++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...+. ..|
T Consensus 79 l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~~~~~~~~~~~g 157 (468)
T PLN02450 79 LALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA-EPGDAFLLPTPYYPGFDRDLKWRTG 157 (468)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC-CCCCEEEECCCCCCchHHHHhhcCC
Confidence 456999999999999999999987774 4789999999999999999999998 899999999999999988888 589
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+++++++++++++|.+|++.++++++++.+.+.++++|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.
T Consensus 158 ~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~ 237 (468)
T PLN02450 158 VEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTV 237 (468)
T ss_pred cEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccc
Confidence 99999999877789999999999998765556689999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcccHHHHHhhc--CCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhhccccCChHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSM--GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVASVNLCSNISGQIL 393 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~--~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~~~~~~~~~~q~a 393 (533)
|++. ++.++..+.... .+.++..+|++++||||.| |++|+|+||+++ + +.+++.+.+.. ...+.+.+.|.+
T Consensus 238 f~~~-~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~li~---~~~~l~~~~~~~~-~~~~~s~~~Q~a 311 (468)
T PLN02450 238 FDSP-GFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDL-GLPGFRVGAIYS---NDEMVVSAATKMS-SFGLVSSQTQYL 311 (468)
T ss_pred cCCC-CcccHHHHhhhcccccCCCCCcEEEEEeccccC-CCCCccEEEEEE---CCHHHHHHHHHHh-hcCCCCHHHHHH
Confidence 8653 455554443210 0001234799999999999 899999999998 5 45666666553 334578899999
Q ss_pred HHHHcCCCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCCh
Q 009517 394 ASLVMSPPKVGDESYESYC-AERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPD 472 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (533)
+..+|+++. +. .+++.++++++++++.+.+.|+++ |+.+.+|+||||+|++++ ... + ...+...
T Consensus 312 ~~~~L~~~~--------~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~flwi~l~--~~~-~---~~~~~~~ 376 (468)
T PLN02450 312 LSALLSDKK--------FTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFCWVDMR--HLL-K---SNTFEAE 376 (468)
T ss_pred HHHHhCCch--------hHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEEEEEch--Hhc-C---cCCchHH
Confidence 999998643 22 245677889999999999999998 899999999999997764 110 0 0011123
Q ss_pred HHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHH
Q 009517 473 AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 473 ~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~ 528 (533)
..++.++++++||.+.||..|+. .+.++|||+++ .+++++++++++|++++++..
T Consensus 377 ~~l~~~ll~~~gV~v~PG~~f~~-~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 377 MELWKKIVYEVKLNISPGSSCHC-TEPGWFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHHhCCEEEeCccccCC-CCCCEEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 45667788889999999999973 44569999998 688999999999999987654
No 36
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-49 Score=412.81 Aligned_cols=367 Identities=20% Similarity=0.338 Sum_probs=298.6
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|.|+.. +.++ +|+.+.+++.+.+... ....|++..|.++||+++|+
T Consensus 35 ~i~l~~g~p~~~-----------------~~~~--------p~~~~~~a~~~~~~~~---~~~~Y~~~~G~~~Lr~aia~ 86 (412)
T PTZ00433 35 IIKLSVGDPTLD-----------------GNLL--------TPAIQTKALVEAVDSQ---ECNGYPPTVGSPEAREAVAT 86 (412)
T ss_pred eeecCCcCCCCc-----------------CCCC--------CCHHHHHHHHHHhhcC---CCCCCCCCCCcHHHHHHHHH
Confidence 999999999731 0011 1567777777666541 25689999999999999999
Q ss_pred HHHhhc------CCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCC
Q 009517 179 GIEARD------GFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL 252 (533)
Q Consensus 179 ~~~~~~------g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~l 252 (533)
++++++ |..+++++|++|+|+++++..+++.++ ++||+|+++.|+|..|...++..|++++.++++++.+|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~ 165 (412)
T PTZ00433 87 YWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALC-DEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEA 165 (412)
T ss_pred HHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcC
Confidence 998765 466889999999999999999999998 8999999999999999999999999999999987778999
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhh
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRS 332 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~ 332 (533)
|++++++++++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.+|.|++. .+.++..+
T Consensus 166 d~~~l~~~~~~------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~--- 235 (412)
T PTZ00433 166 DLDEIRRLVDD------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA-TFTSVADF--- 235 (412)
T ss_pred CHHHHHHHhcc------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC-Cccchhhc---
Confidence 99999998876 789999999999999999999999999999999999999999999988653 33444333
Q ss_pred cCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec---CCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHH
Q 009517 333 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG---FSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYE 409 (533)
Q Consensus 333 ~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~---~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~ 409 (533)
++..++|+++||||+| |+||+|+||+++.+ .++++++.+.+.....++++.+.|.++..+|.+.
T Consensus 236 ----~~~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-------- 302 (412)
T PTZ00433 236 ----DTTVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT-------- 302 (412)
T ss_pred ----cCCCceEEEccchhhc-CCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC--------
Confidence 2233579999999999 89999999998621 1246777777665445688999999998888531
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc
Q 009517 410 SYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP 489 (533)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p 489 (533)
...+++++++.++++++.+.+.|++..|+.++.|+||+|+|++++... . .+..++..++..+++++||.+.|
T Consensus 303 -~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~-~------~~~~~~~~~~~~ll~~~gV~v~p 374 (412)
T PTZ00433 303 -PQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEK-F------RDIKSDVEFYEKLLEEENVQVLP 374 (412)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhh-c------CCCCCHHHHHHHHHHhcCEEEeC
Confidence 124567788899999999999999866888899999999997664210 0 01123456677777778999999
Q ss_pred CCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 490 GSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 490 g~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
|..|+. .+ +|||+++..++++++++++|.+++++++
T Consensus 375 g~~f~~-~~--~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 375 GEIFHM-PG--FTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred ccccCC-CC--eEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 999973 33 9999999778889999999999988665
No 37
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-49 Score=413.30 Aligned_cols=362 Identities=23% Similarity=0.362 Sum_probs=308.3
Q ss_pred cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCC-ccccCCCcccHHHHHH
Q 009517 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRA-TGAYSHSQGIKGLRDT 175 (533)
Q Consensus 97 ~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~a 175 (533)
+.+++|+.|.|+ +..||.+.++++...+....... ...|.+..|.++||++
T Consensus 89 ~~~i~f~~g~p~----------------------------~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ 140 (459)
T COG1167 89 PSVIDFAGGLPD----------------------------PSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREA 140 (459)
T ss_pred CceecCCCCCCC----------------------------cccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHH
Confidence 348999999876 34457888887765544322213 5789999999999999
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHH
Q 009517 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (533)
Q Consensus 176 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~ 255 (533)
+++++....|+.+++++|++|+|+++|+.++++.++ +|||+|++++|+|.+...+++.+|++++.||++++ |+|++
T Consensus 141 ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~-~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~---G~~~e 216 (459)
T COG1167 141 IAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL-DPGDTVLVEDPTYPGALQALEALGARVIPVPVDED---GIDPE 216 (459)
T ss_pred HHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC---CCCHH
Confidence 999999888999999999999999999999999999 89999999999999999999999999999999966 99999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcC
Q 009517 256 EVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (533)
Q Consensus 256 ~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~ 334 (533)
.|++.++.. ++|+++++ +-|||||.++|.++.++|+++|++||++||+||+|++|.|++. +..++..+
T Consensus 217 ~le~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~-p~~~l~~l----- 285 (459)
T COG1167 217 ALEEALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGP-PPPPLKAL----- 285 (459)
T ss_pred HHHHHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCC-CCCChHhh-----
Confidence 999999885 78999888 6799999999999999999999999999999999999999764 33455444
Q ss_pred CCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 335 ~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
+.+++||+++||||+++ ||+|+||+++ ++++++.+...+. ...+++.+.|.+++..+.++. +.+
T Consensus 286 --d~~~rViy~gSFSK~l~--PglRlG~vv~---p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~--------~~~ 350 (459)
T COG1167 286 --DAPGRVIYLGSFSKTLA--PGLRLGYVVA---PPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGH--------YDR 350 (459)
T ss_pred --CCCCCEEEEeeehhhcc--cccceeeeeC---CHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCC--------HHH
Confidence 46679999999999994 8999999998 9999999988876 778899999999999887443 567
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C-CceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-C
Q 009517 414 ERDGILSSLARRAKTLEDAFNSL-E-GITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-G 490 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~-~-g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g 490 (533)
+++++++.|+++++.+.+.|.+. + ++.+..|.||||+|++++.+ + ++..++ ..+.++||.+.| |
T Consensus 351 hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~-----------~-~~~~l~-~~a~~~gv~i~~~g 417 (459)
T COG1167 351 HLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG-----------I-DARELL-AAALEKGVVVTPLG 417 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC-----------C-CHHHHH-HHHHHCCCEEEcCC
Confidence 78899999999999999999997 3 68899999999999766532 1 233333 555668999999 9
Q ss_pred CCCCCCC-CCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 491 SGFGQVP-GTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 491 ~~f~~~~-g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
..|.... ..++|||+++ .++++|++++++|.+++++...
T Consensus 418 ~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 418 SAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9997543 4569999998 8889999999999999987653
No 38
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-49 Score=408.69 Aligned_cols=356 Identities=21% Similarity=0.354 Sum_probs=296.0
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|.|+. +. |+.+++++.+.+.. ....|++..|.++||+++++
T Consensus 28 ~i~l~~g~p~~----------------------~~-------p~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~ 74 (387)
T PRK08912 28 AINLGQGFPDD----------------------PG-------PEDVRRAAADALLD----GSNQYPPMMGLPELRQAVAA 74 (387)
T ss_pred eEEccCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHH
Confidence 89999999874 21 67788887776654 24679999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++.+|++++++ +|++|+|+++++..++..++ ++||+|++++|+|+.|..+++..|++++.++++. ++|++|++.+
T Consensus 75 ~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l 152 (387)
T PRK08912 75 HYARFQGLDLDPETEVMVTSGATEALAAALLALV-EPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAAL 152 (387)
T ss_pred HHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHH
Confidence 9998889888998 99999999999999999998 8999999999999999999999999999999864 3689999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++.+.+ ++++|++++||||||.++|.+++++|+++|++|+++||+||+|.++.|++. ++.++..+ .++
T Consensus 153 ~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~---- 220 (387)
T PRK08912 153 AAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR-RHIPLMTL-PGM---- 220 (387)
T ss_pred HHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC-CCcChhhC-CCc----
Confidence 998876 789999999999999999999999999999999999999999999988652 33443332 111
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
..++|+++||||.| |++|+|+||+++ ++++++.+..... ..++.++..|.++..+|... .++++
T Consensus 221 -~~~~i~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~----------~~~~~ 285 (387)
T PRK08912 221 -RERTVKIGSAGKIF-SLTGWKVGFVCA---APPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKP----------DDYFE 285 (387)
T ss_pred -cCceEEEeechhhc-cCcCceeEEEec---CHHHHHHHHHHHhhccccCChHHHHHHHHHHhCC----------HHHHH
Confidence 23689999999999 899999999998 9999999877765 44677777888887777421 23456
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ- 495 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~- 495 (533)
++++.++++++.+.+.|++. |+.+.+++|+||+|++++... ...++..++..+++++||.+.||..|+.
T Consensus 286 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~---------~~~~~~~~~~~l~~~~gV~v~pg~~f~~~ 355 (387)
T PRK08912 286 GMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLG---------LAEDDVAFCRRLVEEAGVAAIPVSAFYEE 355 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccC---------CCCCHHHHHHHHHhcCCEEEecchhhCCC
Confidence 78888999999999999998 899899999999997664200 0013556677777889999999999953
Q ss_pred CCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 496 VPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 496 ~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
..+.++|||+++.+++++++++++|++++++
T Consensus 356 ~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 356 DPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred CCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 2345699999997788999999999987753
No 39
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-49 Score=410.21 Aligned_cols=355 Identities=22% Similarity=0.348 Sum_probs=300.2
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|+. +. |+.+.+++.+.+.. ....|.+..|.++||+++|+
T Consensus 35 ~i~l~~~~~~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~ 81 (391)
T PRK08361 35 VISLGIGEPDF----------------------DT-------PKNIKEAAKRALDE----GWTHYTPNAGIPELREAIAE 81 (391)
T ss_pred eEEcCCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHH
Confidence 89999999885 21 56677777766654 24579999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++++.+|..+++++|++|+|+++++..++..++ ++||+|++++|+|..+...+...|++++.++++.+++|.+|+++++
T Consensus 82 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 160 (391)
T PRK08361 82 YYKKFYGVDVDVDNVIVTAGAYEATYLAFESLL-EEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELL 160 (391)
T ss_pred HHHHHhCCCCCcccEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHH
Confidence 999888888999999999999999999999998 8999999999999999999999999999999987778899999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+++ ++++|++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++. ...++..+ ++
T Consensus 161 ~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-------~~ 226 (391)
T PRK08361 161 ELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA-KHYPMIKY-------AP 226 (391)
T ss_pred Hhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC-CCCCHhhc-------CC
Confidence 99976 789999999999999999999999999999999999999999999888543 23343332 22
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
+ ++|++.||||++ |++|+|+||+++ ++++++.+.+... ..++.+.+.|.++..+|.++. +.+++++
T Consensus 227 ~-~~i~~~s~SK~~-~~~GlRiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~ 293 (391)
T PRK08361 227 D-NTILANSFSKTF-AMTGWRLGFVIA---PEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKE--------SWKAVEE 293 (391)
T ss_pred C-CEEEEecCchhc-CCcHhhhhhhcc---CHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCc--------ccHHHHH
Confidence 2 579999999999 889999999998 8999998877664 457788899999999987543 1245677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
+++.++++++.+.+.|++++|+.+..|+||||+|++++.. +. ++..++..+++++||.+.||..|+. .
T Consensus 294 ~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~----------~~-~~~~l~~~l~~~~gv~v~pg~~f~~-~ 361 (391)
T PRK08361 294 MRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDET----------GM-SSEDFAEWLLEKARVVVIPGTAFGK-A 361 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCC----------CC-CHHHHHHHHHHhCCEEEcCchhhCC-C
Confidence 8889999999999999998889999999999999776511 11 2455666777778999999999973 4
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+.++|||+++.+++++++++++|++++++
T Consensus 362 ~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 362 GEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 45699999997788999999999988764
No 40
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.7e-49 Score=408.08 Aligned_cols=348 Identities=21% Similarity=0.360 Sum_probs=288.3
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCC--CCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH-HhC
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGF--PADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~--~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~-~~g 236 (533)
...|.+..|.++||+++|+++++++|. ++++++|++|+|+++++.+++.+++ +|||.|+++.|+|++|...+. ..|
T Consensus 88 ~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~-~pGD~Vlv~~P~Y~~f~~~~~~~~g 166 (447)
T PLN02607 88 NALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRWRTG 166 (447)
T ss_pred hhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHhcCC
Confidence 455889999999999999999988773 5889999999999999999999998 899999999999999998877 479
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+++++++++.+++|.+|++.++++++.+++.|.++|+|+++|||||||.++|++++++|+++|++||+++|+||+|..+.
T Consensus 167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 99999999877789999999999999877778899999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASL 396 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~ 396 (533)
|++ .++.++.++..++...+...+++++.||||.| |++|+|+||+++ .+++++..+.... ...+++.+.|.++..
T Consensus 247 f~~-~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~f-g~~GlRvG~ivs--~n~~l~~~~~~~~-~~~~~s~~~q~~~~~ 321 (447)
T PLN02607 247 FSA-SEFVSVAEIVEARGYKGVAERVHIVYSLSKDL-GLPGFRVGTIYS--YNDKVVTTARRMS-SFTLVSSQTQHLLAS 321 (447)
T ss_pred cCC-CCcccHHHHHhhcCCCCCcCcEEEEEcchhcC-CCCcceEEEEEE--cCHHHHHHHHHHh-hcCCCCHHHHHHHHH
Confidence 864 35677766644331001134789999999999 899999999997 3677777776553 233568889999999
Q ss_pred HcCCCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHH
Q 009517 397 VMSPPKVGDESYESYC-AERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFY 475 (533)
Q Consensus 397 ~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (533)
+|+++. |. ++++..+++++++++.+.+.|++. |+.+.++++|+|+|++++ .. .. ......+..+
T Consensus 322 ~L~d~~--------~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~--~~-~~---~~~~~~e~~l 386 (447)
T PLN02607 322 MLSDEE--------FTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLS--PL-LE---TPTREGELAL 386 (447)
T ss_pred HhCCch--------hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEch--Hh-hc---CCCchhHHHH
Confidence 998653 22 445678889999999999999998 899999999999998764 11 00 0001123455
Q ss_pred HHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 476 CRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 476 ~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+.++++++||.+.||..|+. ...+||||+++ .++++++++++||.+++++.+.
T Consensus 387 ~~~ll~~~gV~v~pG~~f~~-~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 387 WDSILREVKLNISPGSSCHC-SEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred HHHHHHhCCEEEcCccccCC-CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 66778888999999999974 44559999999 5889999999999999987764
No 41
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=5.6e-49 Score=406.27 Aligned_cols=376 Identities=26% Similarity=0.473 Sum_probs=301.0
Q ss_pred cchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHh
Q 009517 74 GEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILD 153 (533)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~ 153 (533)
..+...+.+.+..+.+ +|+|+.|.|...+. . +|+.+.+++.+.+.
T Consensus 16 ~~~~~~~~~~~~~~~~---------~i~l~~g~p~~~~~-------------------~-------p~~~~~~~~~~~~~ 60 (398)
T PRK08363 16 RDVVLPARELEKKGIK---------VIRLNIGDPVKFDF-------------------Q-------PPEHMKEAYCRAIK 60 (398)
T ss_pred HHHHHHHHHHHhcCCC---------eEEEeCCCCCcCCC-------------------C-------CCHHHHHHHHHHHH
Confidence 3444455544444444 99999999952110 1 16777877777775
Q ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH
Q 009517 154 QIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA 233 (533)
Q Consensus 154 ~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~ 233 (533)
. ....|++..|..+||++++++++..+|+.+++++|++|+|+++|+..++.+++ ++||+|++++|+|..+...++
T Consensus 61 ~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~ 135 (398)
T PRK08363 61 E----GHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALL-DPGDEILIPGPSYPPYTGLVK 135 (398)
T ss_pred c----CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHH
Confidence 4 23579999999999999999999988988999999999999999999999998 899999999999999999999
Q ss_pred HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 009517 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (533)
Q Consensus 234 ~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~ 313 (533)
.+|.+++.++..++++|.+|++.+++++++ ++++|+++|||||||.+++.+++++|+++|+++|+++|+||+|.
T Consensus 136 ~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~ 209 (398)
T PRK08363 136 FYGGVPVEYRTIEEEGWQPDIDDIRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD 209 (398)
T ss_pred HcCCEEEEeccccccCCcCCHHHHHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh
Confidence 999999888433345788999999998876 78999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh----hccccCChH
Q 009517 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA----SVNLCSNIS 389 (533)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~----~~~~~~~~~ 389 (533)
++.|++. ..++..+ ....++|++.||||.| ++||+|+||+++. .++++++.+.... ...++++.+
T Consensus 210 ~~~~~~~--~~~~~~~-------~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~-~~~~~~~~l~~~~~~~~~~~~~~s~~ 278 (398)
T PRK08363 210 LMTYEGK--HVSPGSL-------TKDVPVIVMNGLSKVY-FATGWRLGYIYFV-DPEGKLAEVREAIDKLARIRLCPNTP 278 (398)
T ss_pred hhccCCc--ccCHHHc-------CcCCcEEEEecchhcc-CCccceEEEEEEe-CcHHHHHHHHHHHHHHhcccccCChH
Confidence 9888642 3343333 2344689999999998 7899999999851 1556666554432 234678999
Q ss_pred HHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCC
Q 009517 390 GQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKT 469 (533)
Q Consensus 390 ~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 469 (533)
+|.++..+|.+. .+++++++++++++++.+.+.|++++++.+..|+||||+|++++.- ..
T Consensus 279 ~q~~~~~~l~~~----------~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~----------~~ 338 (398)
T PRK08363 279 AQFAAIAGLTGP----------MDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEG----------PW 338 (398)
T ss_pred HHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccC----------CC
Confidence 999999888532 2456677888999999999999988888888999999999765410 01
Q ss_pred CChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 470 VPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 470 ~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.++..++.++|+++||.+.||..|+. .+.++|||+++.+++++++++++|++++++.
T Consensus 339 ~~~~~~~~~~l~~~gV~v~~g~~f~~-~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 339 KDDKEFVLDVLHEAHVLFVHGSGFGE-YGAGHFRLVFLPPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 12455566778899999999999973 4456999999988889999999999988764
No 42
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=8.9e-49 Score=403.42 Aligned_cols=356 Identities=23% Similarity=0.365 Sum_probs=295.7
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|+. .. |+.+.+++.+.+.. ....|.+..|.++||+++++
T Consensus 32 ~i~l~~~~~~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~ 78 (391)
T PRK07309 32 ILKLTLGEPDF----------------------TT-------PDHVKEAAKRAIDA----NQSHYTGMAGLLELRQAAAD 78 (391)
T ss_pred eEEcCCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHH
Confidence 89999999874 21 56677777776654 23569999999999999999
Q ss_pred HHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++.+|+.+.+ ++|++|+|+++++.++++.++ ++||+|++++|+|.++..+++..|.+++.++.++ .+|.+|++.+
T Consensus 79 ~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l 156 (391)
T PRK07309 79 FVKEKYNLDYAPENEILVTIGATEALSASLTAIL-EPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEML 156 (391)
T ss_pred HHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHH
Confidence 999888987775 799999999999999999998 8999999999999999999999999999999864 4678999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++. ..++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++. +..++..+ .
T Consensus 157 ~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~-~~~~~~~~-------~ 225 (391)
T PRK07309 157 EKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE-PHVSIAEY-------L 225 (391)
T ss_pred HHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC-CCCCHHHh-------c
Confidence 9998752 12589999999999999999999999999999999999999999999998653 34444433 2
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
+ .++|++.||||.+ |+||+|+||+++ ++++++.+..... ...+++.+.|.++..+|++.. .+..
T Consensus 226 ~-~~~i~~~S~SK~~-g~~GlRvG~~v~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----------~~~~ 290 (391)
T PRK07309 226 P-DQTILINGLSKSH-AMTGWRIGLIFA---PAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGK----------DDAL 290 (391)
T ss_pred c-CCEEEEecChhhc-cCccceeEEEEe---CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCCh----------hHHH
Confidence 2 3689999999999 899999999998 9999999887654 456788999999999987532 1234
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
.+++.++++++.+.+.|++. |+.+..|+||+|+|++++ .+. ..++..++.++++++||.+.||..|+ .
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l~--~~~--------~~~~~~~~~~l~~~~gv~v~pg~~f~-~ 358 (391)
T PRK07309 291 PMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKIP--AGY--------NQDSFKFLQDFARKKAVAFIPGAAFG-P 358 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEECC--CCC--------CCCHHHHHHHHHHhCCEEEeCchhhC-C
Confidence 56778899999999999998 899999999999997654 210 01345566677888999999999997 4
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+.++|||+++.+.+++++++++|+++++++
T Consensus 359 ~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 359 YGEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred CCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 4566999999877789999999999988664
No 43
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=5.7e-49 Score=403.87 Aligned_cols=349 Identities=21% Similarity=0.327 Sum_probs=291.5
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|.. +. ++.+.+++.+.+.. ....|++..|.++||+++++
T Consensus 31 ~i~l~~g~p~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~ 77 (384)
T PRK12414 31 ALNLSQGAPNF----------------------AP-------DPALVEGVARAMRD----GHNQYAPMAGIAALREALAE 77 (384)
T ss_pred eEEcCCCCCCC----------------------CC-------CHHHHHHHHHHHHh----CCCCcCCCCCcHHHHHHHHH
Confidence 89999999874 21 56777777766654 24679999999999999999
Q ss_pred HHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++.+.+|.++++ ++|++|+|+++++..+++.++ ++||+|++++|+|..|...++.+|++++.++++++ +|.+|++.+
T Consensus 78 ~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l 155 (384)
T PRK12414 78 KTERLYGARYDPASEVTVIASASEGLYAAISALV-HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPE-DFRVNWDEV 155 (384)
T ss_pred HHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCcc-ccccCHHHH
Confidence 999988987765 689999999999999999998 89999999999999999999999999999998753 688999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++ ++++|++++||||||.++|.+++++|+++|++||+++|+||+|..+.|++. +..++..+ ..
T Consensus 156 ~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~-~~----- 222 (384)
T PRK12414 156 AAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA-RHHSMARH-RE----- 222 (384)
T ss_pred HhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC-CccCcccC-cC-----
Confidence 999875 799999999999999999999999999999999999999999999988653 23333222 11
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
-..++|++.||||.| |+||+|+||+++ ++++++.+.+... ..++++.+.|.++..+|.++. + ..
T Consensus 223 ~~~~~i~~~SfSK~~-~~pGlRiG~~v~---~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~--------~---~~ 287 (384)
T PRK12414 223 LAERSVIVSSFGKSY-HVTGWRVGYCLA---PAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPA--------S---YL 287 (384)
T ss_pred ccCcEEEEecccccc-cCccceEEEEec---CHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCCh--------H---HH
Confidence 123689999999999 899999999998 9999999988765 567889999999999997542 1 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCC-CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL-PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
.+++.|+++++.+.+.|++. |+.+.+++||||+|++++. +. ..+..++.++++++||.+.||..|+.
T Consensus 288 ~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gV~v~pg~~f~~ 355 (384)
T PRK12414 288 GLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSD-----------ESDSDFVLRLIRDARVATIPLSAFYT 355 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCC-----------CCHHHHHHHHHHhCCEEEecchhhcC
Confidence 46778999999999999998 8999999999999976641 11 12455666788889999999999963
Q ss_pred C-CCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 496 V-PGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 496 ~-~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
. .+.++|||+++.+++++++++++|.+
T Consensus 356 ~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 356 DGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred CCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 2 22469999999888899999999864
No 44
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=3.9e-49 Score=408.51 Aligned_cols=380 Identities=24% Similarity=0.333 Sum_probs=296.2
Q ss_pred CcCcccccCcc-ccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccC
Q 009517 60 SLNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQG 138 (533)
Q Consensus 60 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~ 138 (533)
.+|..+..+.. +.+..+..+.++...... + +++++|+.|+|++ +.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~i~l~~~~~~~----------------------~~----- 48 (409)
T PRK07590 3 KINENYLKLKAGYLFPEIARRVNAFREANP-E------AKIIRLGIGDVTQ----------------------PL----- 48 (409)
T ss_pred ccccccCccCCcchHHHHHHHHHHHhhhcC-C------CceEEecCcCCCC----------------------CC-----
Confidence 34555555553 445566666666655321 1 2399999999885 22
Q ss_pred CCCHHHHHHHHHHHhcCCC-CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 139 LFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 139 ~~p~~v~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+.+++.+.+..... .....|++..|.++||+++|+++.+.+|..+++++|++|+|+++++..++ .++ ++||+
T Consensus 49 --~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~-~~gd~ 124 (409)
T PRK07590 49 --PPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIF-GPDNT 124 (409)
T ss_pred --CHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-Hhc-CCCCE
Confidence 57777777777664210 12568999999999999999999888899999999999999999999875 455 79999
Q ss_pred EEEcCCcCcchHHHHHHhCCe-----------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 218 ILCPIPQYPLYSASIALHGGT-----------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
|++++|+|+.|...++..|.+ ++.++++.+++|.+|++. . ++++|++++||||||.+
T Consensus 125 V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~------~~k~i~l~nP~NPTG~~ 192 (409)
T PRK07590 125 IAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------E------KVDIIYLCFPNNPTGTV 192 (409)
T ss_pred EEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------c------CceEEEEeCCCCCcCCc
Confidence 999999999999999999987 899998766667666432 2 78999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
+|.+++++|+++|++||++||+||+|.+|.+++. ...++..+ . ....++|+++||||++ |+||+|+||+++
T Consensus 193 ~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~-~-----~~~~~vi~~~SfSK~~-~~pGlRiG~~i~- 263 (409)
T PRK07590 193 LTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS-LPHSIYEI-E-----GARECAIEFRSFSKTA-GFTGTRCAYTVV- 263 (409)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC-CCcchhhC-C-----CcccceEEEecCcccc-CCcCceeEEEEc-
Confidence 9999999999999999999999999999888653 22333332 1 1123689999999999 899999999998
Q ss_pred cCCHHHHHHH------------HHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 367 GFSAEVREQI------------YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 367 ~~~~~~~~~l------------~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 433 (533)
++++++.+ ..... ...+++.+.|.++..++.+.. .++++++++.++++++.+.+.|
T Consensus 264 --~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~---------~~~~~~~~~~~~~~r~~l~~~L 332 (409)
T PRK07590 264 --PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG---------KAQIKELIDYYMENAKIIREGL 332 (409)
T ss_pred --CHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 88888622 11122 224578899999988886321 2456778889999999999999
Q ss_pred hcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcH
Q 009517 434 NSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKI 513 (533)
Q Consensus 434 ~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i 513 (533)
++. |+.+..|+||+|+|++++.. . ++..++..+++++||.+.||..|+ ..+.++|||++..+++++
T Consensus 333 ~~~-~~~~~~~~g~~f~wi~~~~~-----------~-~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~~~~~~l 398 (409)
T PRK07590 333 ESA-GFEVYGGVNAPYIWVKTPDG-----------M-SSWDFFDKLLQEANVVGTPGSGFG-PSGEGYFRLSAFGSRENV 398 (409)
T ss_pred Hhc-CCceecCCcceEEEEECCCC-----------C-CHHHHHHHHHHHCCEEEeChhHhC-CCCCCEEEEEccCCHHHH
Confidence 998 88888899999999876521 1 234566677778899999999997 445569999987788899
Q ss_pred HHHHHHHHHH
Q 009517 514 PAIVTRLTDF 523 (533)
Q Consensus 514 ~~~~~~l~~~ 523 (533)
++++++|.++
T Consensus 399 ~~~l~rl~~~ 408 (409)
T PRK07590 399 LEAMERIKKA 408 (409)
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 45
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-48 Score=402.62 Aligned_cols=356 Identities=21% Similarity=0.314 Sum_probs=292.7
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|++|+|+. .. |+.+++++.+.+... ....|++ .|..+||+++|
T Consensus 45 ~~i~L~~g~p~~----------------------~~-------~~~~~~~l~~~~~~~---~~~~Y~~-~G~~~lr~aia 91 (410)
T PRK06290 45 ELIDMGVGEPDE----------------------MA-------DESVVEVLCEEAKKP---ENRGYAD-NGIQEFKEAAA 91 (410)
T ss_pred CeEEcCCCCCCC----------------------CC-------CHHHHHHHHHHHhCC---CCCCCCC-CCcHHHHHHHH
Confidence 389999999875 21 567777777665432 2456876 89999999999
Q ss_pred HHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHH
Q 009517 178 AGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (533)
Q Consensus 178 ~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~ 255 (533)
+++.+++|++ ++++ +|++|+|+++++..++++++ ++||+|+++.|+|+.|...++..|++++.++++++++|.+|++
T Consensus 92 ~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~ 170 (410)
T PRK06290 92 RYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFI-NPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLD 170 (410)
T ss_pred HHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhC-CCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHH
Confidence 9999988988 8886 79999999999999999998 8999999999999999999999999999999998778889999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCC
Q 009517 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (533)
Q Consensus 256 ~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 335 (533)
.+++++.+ ++++|++++||||||.++|.+++++|+++|++||++||+||+|.++.|++. ..++..+.
T Consensus 171 ~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~--~~s~~~~~----- 237 (410)
T PRK06290 171 SIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK--PLSFLSVP----- 237 (410)
T ss_pred HHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC--CcChhcCC-----
Confidence 99998876 789999999999999999999999999999999999999999999988542 23433321
Q ss_pred CCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH
Q 009517 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (533)
Q Consensus 336 ~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 414 (533)
+...++|+++||||.+ |+||+|+||+++ ++++++.+..... ...+++.+.|.++..+|.++ ++
T Consensus 238 -~~~~~~I~i~SfSK~~-g~~GlRiG~ii~---~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~-----------~~ 301 (410)
T PRK06290 238 -GAKEVGVEIHSLSKAY-NMTGWRLAFVVG---NELIVKAFATVKDNNDSGQFIAIQKAGIYALDHP-----------EI 301 (410)
T ss_pred -CccccEEEEeechhhc-CCchhheEeEEe---CHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCc-----------HH
Confidence 1123579999999999 899999999998 9999999887765 45666778999999888642 33
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCC
Q 009517 415 RDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFG 494 (533)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~ 494 (533)
++++++.++++++.+.+.|++. |+.+.+|+||||+|++++ ..... ..+..++..++..++++.+|.+.||..|+
T Consensus 302 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~lp--~~~~~---~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~ 375 (410)
T PRK06290 302 TEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKAP--KGTKS---GIKFENAEEFSQYLIKEKLISTVPWDDAG 375 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEECC--Ccccc---CCCCCCHHHHHHHHHHhCCEEEECCcccc
Confidence 5678888999999999999998 899899999999997654 11000 00001356677788887788889988775
Q ss_pred CCCCCceEEEEec---CCcCcHHHHHHHHHHHHHHH
Q 009517 495 QVPGTWHFRCTIL---PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 495 ~~~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~ 527 (533)
+++||+++ .++++.++++++|++.|.++
T Consensus 376 -----~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 376 -----HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred -----CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 29999997 57777899999998888765
No 46
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=7.8e-49 Score=403.29 Aligned_cols=353 Identities=24% Similarity=0.388 Sum_probs=296.6
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|.|.. +. ++.+.+++.+.+.. ....|++..|..+||+++|+
T Consensus 30 ~i~l~~~~p~~----------------------~~-------~~~~~~a~~~~~~~----~~~~Y~~~~g~~~lr~~ia~ 76 (387)
T PRK07683 30 LISLTIGQPDF----------------------PT-------PSHVKEAAKRAITE----NYTSYTHNAGLLELRKAACN 76 (387)
T ss_pred eEEecCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHH
Confidence 89999999874 11 56777777777764 25689999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++.+|+.++++ +|++|+|+++|+..+++.++ ++||+|++++|+|.+|..+++..|++++.++.+. ++|.+|.+.+
T Consensus 77 ~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l 154 (387)
T PRK07683 77 FVKDKYDLHYSPESEIIVTIGASEAIDIAFRTIL-EPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEAL 154 (387)
T ss_pred HHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-CCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHH
Confidence 9998889888898 99999999999999999998 7999999999999999999999999999999875 4788899999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++.+++ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ..++.++. +
T Consensus 155 ~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~------~ 220 (387)
T PRK07683 155 ENAITE------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP--HTSIAHFP------E 220 (387)
T ss_pred HHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC--cCChhhcc------C
Confidence 998876 789999999999999999999999999999999999999999999888542 33433321 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
...++|+++||||.+ |+||+|+||+++ ++++++.+.+... ...+++.++|.++..+|.++. .+++
T Consensus 221 ~~~~vi~~~s~SK~~-~~pGlRiG~i~~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----------~~~~ 286 (387)
T PRK07683 221 MREKTIVINGLSKSH-SMTGWRIGFLFA---PSYLAKHILKVHQYNVTCASSISQYAALEALTAGK----------DDAK 286 (387)
T ss_pred CcCCeEEEeeccccc-cCccceeEEEEc---CHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh----------HHHH
Confidence 223689999999999 899999999998 9999999887654 345677889999998886432 3456
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
+++++++++++.+.+.|++. |+.+..|+||+|+|+.++.. ..++..++.++++++||.+.||+.|+ .
T Consensus 287 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ll~~~gI~v~pg~~f~-~ 353 (387)
T PRK07683 287 MMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFYLFPSIGHF-----------TMSSFDFALDLVEEAGLAVVPGSAFS-E 353 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEEEEEecccC-----------CCCHHHHHHHHHHhCCEEEcCchhhC-C
Confidence 77888999999999999987 88889999999999755410 01245566677888999999999997 3
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+.++|||+++.+++++++++++|.+++++-
T Consensus 354 ~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 354 YGEGYVRLSYAYSIETLKEGLDRLEAFLQQK 384 (387)
T ss_pred CCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 4456999999988889999999999987653
No 47
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7.6e-49 Score=411.49 Aligned_cols=348 Identities=20% Similarity=0.311 Sum_probs=283.5
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH-HhC
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~-~~g 236 (533)
...|++..|.++||+++|+++++.+| +++++++|++|+|+++++..++.+++ +|||.|++++|+|+.|...+. ..|
T Consensus 87 ~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~-~pGD~Vlv~~P~Y~~~~~~~~~~~G 165 (496)
T PLN02376 87 IANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA-DPGDVFLIPSPYYAAFDRDLRWRTG 165 (496)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC-CCCCEEEECCCCccchHHHHHhhCC
Confidence 45689999999999999999998888 66899999999999999999999998 899999999999999998887 589
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+++++++++.+++|++|++.++++++.+...+.++|+|+++|||||||.++|.+++++|+++|++||++||+||+|.++.
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 99999999877789999999998876544334579999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccHHHHHhhcCCCC-CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGE-KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILAS 395 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~ 395 (533)
|++. ++.++.++..+..... ....++++.||||.| |+||+|+||+++ .++.+.+.+.... .....+.+.|.++.
T Consensus 246 f~~~-~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~-glpGlRvG~li~--~~~~l~~~~~~~~-~~~~vs~~~Q~a~~ 320 (496)
T PLN02376 246 FAGG-DFVSVAEVVNDVDISEVNVDLIHIVYSLSKDM-GLPGFRVGIVYS--FNDSVVSCARKMS-SFGLVSSQTQLMLA 320 (496)
T ss_pred cCCC-CcccHHHhhccccccccCCCeEEEEEeccccC-CCCcceEEEEEE--CCHHHHHHHHHHh-hcCCCCHHHHHHHH
Confidence 8653 4667766644321000 112567799999999 899999999997 2466666655444 33457899999999
Q ss_pred HHcCCCCCCChhHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHH
Q 009517 396 LVMSPPKVGDESYESY-CAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAF 474 (533)
Q Consensus 396 ~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (533)
.+|.++. + .+++++++++++++++.+.+.|++. |+.+.+++||+|+|++++ ... .. ......+..
T Consensus 321 ~~L~d~~--------~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~--~~~-~~--~~~~~~e~~ 386 (496)
T PLN02376 321 SMLSDDQ--------FVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLR--HLL-RD--RNSFESEIE 386 (496)
T ss_pred HHhCChh--------HHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEch--hhh-cc--CCchhHHHH
Confidence 9997542 3 3456778889999999999999987 899999999999997764 110 00 000112356
Q ss_pred HHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHH
Q 009517 475 YCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 475 ~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~ 528 (533)
++..++++.||.+.||+.|+. .+.++|||+++ .+++++++++++|++++.+.+
T Consensus 387 l~~~ll~~~gV~v~pGs~F~~-~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 387 LWHIIIDKVKLNVSPGSSFRC-TEPGWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred HHHHHHHcCCEEEeCccccCC-CCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 677788888999999999973 34569999998 688999999999999997544
No 48
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-48 Score=401.31 Aligned_cols=356 Identities=23% Similarity=0.331 Sum_probs=296.2
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|.|+. +. |+.+.+++.+.+... ....|.+..|.+++|+++++
T Consensus 29 ~~~l~~g~~~~----------------------~~-------~~~~~~a~~~~~~~~---~~~~Y~~~~G~~~lr~~~~~ 76 (389)
T PRK05957 29 TISLGQGVVSY----------------------PP-------PPEAIEALNNFLANP---ENHKYQAVQGIPPLLEAITQ 76 (389)
T ss_pred eEEccCCCCCC----------------------CC-------CHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHH
Confidence 89999999874 21 677888777766532 24579999999999999999
Q ss_pred HHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++.+.+|..++ +++|++|+|+++++..++..++ ++||+|++++|+|..+...++..|++++.++.+ .+|++|++++
T Consensus 77 ~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l 153 (389)
T PRK05957 77 KLQQDNGIELNNEQAIVVTAGSNMAFMNAILAIT-DPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAI 153 (389)
T ss_pred HHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHH
Confidence 99988897777 7799999999999999999888 899999999999999999889999999999985 3678999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++ ++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.|++. +..+...+ . +
T Consensus 154 ~~~i~~------~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~-~~~~~~~~-~-----~ 220 (389)
T PRK05957 154 EQAITP------KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV-KHFSPGSI-P-----G 220 (389)
T ss_pred HHhcCc------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC-CccChhhC-C-----C
Confidence 999976 799999999999999999999999999999999999999999999988642 23333222 1 2
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
...++|++.||||.+ |++|+|+||+++ ++++++++..... ...+++.+.|.++..+|.++. .+++
T Consensus 221 ~~~~~i~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----------~~~~ 286 (389)
T PRK05957 221 SGNHTISLYSLSKAY-GFASWRIGYMVI---PIHLLEAIKKIQDTILICPPVVSQYAALGALQVGK----------SYCQ 286 (389)
T ss_pred ccCcEEEEecchhhc-cCccceeEEEec---CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh----------HHHH
Confidence 334689999999999 899999999998 8999999988765 456778899999988886432 2345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCc-eEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGI-TCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
+.++.++++++.+.+.|++++++ .+.+|+||||+|++++.. . ++.+++.++++++||.+.||+.|+.
T Consensus 287 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~-----------~-~~~~~~~~l~~~~gv~v~pg~~f~~ 354 (389)
T PRK05957 287 QHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD-----------L-NDFELVKQLIREYRVAVIPGTTFGM 354 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC-----------C-ChHHHHHHHHHHCCEEEccchhhCC
Confidence 55567899999999999988674 778899999999776421 1 3456677777789999999999973
Q ss_pred CCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 496 VPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 496 ~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.+.++|||+++ .+++++++++++|.+.++++.+
T Consensus 355 -~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 355 -KNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred -CCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence 33459999997 7888999999999999988654
No 49
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-48 Score=399.71 Aligned_cols=367 Identities=19% Similarity=0.251 Sum_probs=290.7
Q ss_pred CccccccchHHHHHHHHHH-hhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHH
Q 009517 68 CEYAVRGEIVSIAQRLQQE-LQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIE 146 (533)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~ 146 (533)
++++++..+.+...++... |.+ +++|+.|.|.+ +. |+.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~p~~----------------------~~-------~~~~~~ 44 (374)
T PRK05839 3 FEPYPFEKLRELLKEITPNKEYK---------GLDLTIGEPQF----------------------ET-------PKFIQD 44 (374)
T ss_pred CCcchHHHHHHHHHHhhhcCCCC---------eEEcCCCCCCC----------------------CC-------CHHHHH
Confidence 3445565666667767665 445 99999999875 22 566666
Q ss_pred HHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEEEcCCcC
Q 009517 147 RAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQY 225 (533)
Q Consensus 147 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv~~p~~ 225 (533)
++.+.... ...|++..|..+||+++|+++++++|.++++++|++|+|+++++..++..++. .+||.|+++.|+|
T Consensus 45 a~~~~~~~-----~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y 119 (374)
T PRK05839 45 ALKNNAHL-----LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFY 119 (374)
T ss_pred HHHHHhhc-----cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCc
Confidence 66655432 56799999999999999999999899889999999999999999999887742 3689999999999
Q ss_pred cchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 009517 226 PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (533)
Q Consensus 226 ~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~ 305 (533)
+.|...+...|+++++++++.+++|.+|++..+ + + ++++|+++|||||||.+++.+++++|+++|+++|++
T Consensus 120 ~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ 190 (374)
T PRK05839 120 QIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-Q------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFI 190 (374)
T ss_pred hhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-c------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCE
Confidence 999999999999999999987777888876542 2 2 689999999999999999999999999999999999
Q ss_pred EEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccc
Q 009517 306 LLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNL 384 (533)
Q Consensus 306 lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~ 384 (533)
||+||+|.++.+++ +..++......... ....++|+++||||.| |+||+|+||+++ ++++++.+..... ..+
T Consensus 191 ii~DE~Y~~~~~~~--~~~s~~~~~~~~~~-~~~~~vi~~~SfSK~~-~~~GlRiG~ii~---~~~~~~~~~~~~~~~~~ 263 (374)
T PRK05839 191 LINDECYSEIYENT--PPPSLLEASILVGN-ESFKNVLVINSISKRS-SAPGLRSGFIAG---DASILKKYKAYRTYLGC 263 (374)
T ss_pred EEeccchhhcccCC--CCCCHhhhhcccCc-cccCcEEEEecccccc-CCccceeEEEec---CHHHHHHHHHHHhhcCC
Confidence 99999999976532 33443332110000 1124789999999998 899999999998 8999999887754 456
Q ss_pred cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHH
Q 009517 385 CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAA 464 (533)
Q Consensus 385 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~ 464 (533)
+.+.+.|.++..++.+. ++++.++++++++++.+.+.| ++. .|+||+|+|++++
T Consensus 264 ~~~~~~q~~~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~--------- 317 (374)
T PRK05839 264 ASPLPLQKAAAVAWLDD-----------EHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVD--------- 317 (374)
T ss_pred CCChHHHHHHHHHhccc-----------hHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCC---------
Confidence 78888898888777531 345667888888888887765 333 7899999997654
Q ss_pred HhcCCCChHHHHHHHHHccceEEEcCCCCCCC-CCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 465 EAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-PGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 465 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
++..++.++++++||.+.||..|+.. .+.++|||+++.+++++++++++|+++++
T Consensus 318 ------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 318 ------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred ------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 13456677777799999999988742 23469999998778899999999998875
No 50
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-48 Score=400.79 Aligned_cols=379 Identities=23% Similarity=0.321 Sum_probs=307.5
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
+++....+.++..+++.+.+..+.++. .|+|+.|.|+. .. +.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~-------~~ 45 (386)
T PRK07550 4 PLIAALFPPPIPEVRAWLAGYDGADGP---------LIDLSQAVPGY----------------------PP-------PP 45 (386)
T ss_pred hhhhhcCChHHHHHHHHHHHHhhcCCC---------eEEeCCCCCCC----------------------CC-------CH
Confidence 344445555666777777777665555 89999999874 11 45
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~ 222 (533)
.+.+++.+.+.. . ....|++..|.++||+++++++++.+|..+++++|++|+|+++++..++.+++ ++||+|++++
T Consensus 46 ~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~ 121 (386)
T PRK07550 46 ELLRALAEAAAD--P-AAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLA-GAGDEVILPL 121 (386)
T ss_pred HHHHHHHHHHhC--c-CCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhc-CCCCEEEEcC
Confidence 666666665542 1 35679999999999999999999989988999999999999999999999998 8999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|.++..+++..|++++.++++++.+|.+|++.+++++++ ++++|++++||||||.++|.+++++|+++|++|
T Consensus 122 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~ 195 (386)
T PRK07550 122 PWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRH 195 (386)
T ss_pred CCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc
Confidence 99999999999999999999998766888999999999976 789999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~- 381 (533)
|++||+||+|.+|.+++..+ .+... .. +.+.++|++.||||++ |++|+|+||+++ ++++++.+.....
T Consensus 196 ~~~iI~Dd~y~~~~~~~~~~-~~~~~---~~---~~~~~~i~~~S~SK~~-g~~G~RiG~i~~---~~~~~~~~~~~~~~ 264 (386)
T PRK07550 196 GIALILDETYRDFDSGGGAP-HDLFA---DP---DWDDTLVHLYSFSKSY-ALTGHRVGAVVA---SPARIAEIEKFMDT 264 (386)
T ss_pred CeEEEEeccchhhccCCCCC-cchhh---CC---CccccEEEEecchhhc-cCcccceEeeec---CHHHHHHHHHHHhh
Confidence 99999999999987643222 22211 10 1234689999999999 889999999998 8999988887765
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHH
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~ 461 (533)
.+.+++.++|.++..++.. +.++++++++.++++++.+.+.|.+++++.+ .+.|++|+|++++.. +
T Consensus 265 ~~~~~s~~~q~~~~~~l~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~-~-- 330 (386)
T PRK07550 265 VAICAPRIGQIAVAWGLPN----------LADWRAGNRAEIARRRDAFRAVFARLPGWEL-LASGAYFAYVRHPFP-D-- 330 (386)
T ss_pred cccCCCcHHHHHHHHHhcc----------HHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCCceEEEEecCCCC-C--
Confidence 5677899999999988852 2345567788899999999999988756654 477999999765420 0
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~ 523 (533)
.++..++.++++++||.+.||..|+. .+.++|||+++ .+++++++++++|.++
T Consensus 331 --------~~~~~l~~~l~~~~gv~v~pg~~f~~-~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 331 --------RPSREVARRLAKEAGILCLPGTMFGP-GQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred --------CCHHHHHHHHHHhcCEEEeCchhhCC-CCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 13455666777889999999999973 34569999998 6788999999999875
No 51
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-48 Score=402.93 Aligned_cols=382 Identities=27% Similarity=0.437 Sum_probs=304.1
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++......++..+...+.+....+.+ +++|+.|.|+. +. |+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~-------~~~ 47 (397)
T PRK07568 6 RVLNMPASPIRKLVPYADEAKKRGIK---------VYHLNIGQPDI----------------------KT-------PEV 47 (397)
T ss_pred HhhhCCcchHHHHHHHHHHHHhhCCC---------EEEecCCCCCC----------------------CC-------CHH
Confidence 33334444444454444433333333 89999999874 22 566
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p 223 (533)
+.+++.+... ....|++..|.++||+++++++. .+|..+++++|++|+|+++++..++..++ ++||+|++++|
T Consensus 48 ~~~a~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p 120 (397)
T PRK07568 48 FFEAIKNYDE-----EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAIC-DPGDEILVPEP 120 (397)
T ss_pred HHHHHHHHhc-----CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhc-CCCCEEEEecC
Confidence 7766655443 25679999999999999999998 57888899999999999999999999987 89999999999
Q ss_pred cCcchHHHHHHhCCeEEEEecCCCCCCCC-CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 224 QYPLYSASIALHGGTLVPYYLDEATGWGL-ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~l-d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
+|.+|...++..|.+++.++++.+.+|.+ +++.+++++++ ++++|++++||||||.+++.+++++|+++|+++
T Consensus 121 ~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~ 194 (397)
T PRK07568 121 FYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP------KTKAILISNPGNPTGVVYTKEELEMLAEIAKKH 194 (397)
T ss_pred CCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc------cceEEEEECCCCCCCccCCHHHHHHHHHHHHHC
Confidence 99999999999999999999975556654 68999998876 789999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhc
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV 382 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~ 382 (533)
|++||+||+|.+|.|++. +..++..+. ....++|++.||||.+ |++|+|+||+++ .++++++.+.+....
T Consensus 195 ~~~ii~De~y~~~~~~~~-~~~s~~~~~------~~~~~~i~~~S~SK~~-~~~G~R~G~~~~--~~~~~~~~~~~~~~~ 264 (397)
T PRK07568 195 DLFLISDEVYREFVYDGL-KYTSALSLE------GLEDRVIIIDSVSKRY-SACGARIGCLIS--KNKELIAAAMKLCQA 264 (397)
T ss_pred CcEEEEeccchhcccCCC-CccChhhcC------CCcCCEEEEecchhhc-cCCCcceEEEec--CCHHHHHHHHHHhhc
Confidence 999999999999988653 334443331 1134689999999999 789999999987 247888877665544
Q ss_pred cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHH
Q 009517 383 NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIK 462 (533)
Q Consensus 383 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~ 462 (533)
.++++.+.|.++..+|+..+ .+++++++.++++++.+.+.|++++|+.+..|+||+|+|++++.
T Consensus 265 ~~~~s~~~q~~~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~------ 328 (397)
T PRK07568 265 RLSPPTLEQIGAAALLDTPE----------SYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPV------ 328 (397)
T ss_pred cCCCCcHHHHHHHHHhhCCH----------HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCC------
Confidence 57889999999999986421 44677888899999999999999888888999999999976641
Q ss_pred HHHhcCCCChHHHHHHHHHc-----cceEEEcCCCCCCCC--CCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 463 AAEAEKTVPDAFYCRRLLNA-----TGIVLVPGSGFGQVP--GTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 463 ~~~~~~~~~~~~~~~~ll~~-----~gV~v~pg~~f~~~~--g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.++..++..++++ +||.+.||..|+..+ +.++|||+++.+++++++++++|+++++++.+
T Consensus 329 -------~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~~~~ 395 (397)
T PRK07568 329 -------DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEALEKYNK 395 (397)
T ss_pred -------CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHhhc
Confidence 1245556666654 699999999995322 34699999987789999999999999987653
No 52
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.6e-48 Score=403.18 Aligned_cols=365 Identities=24% Similarity=0.401 Sum_probs=296.3
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|.|...+.. + +++.+.+++.+.+... ....|++..|..++|+++++
T Consensus 33 ~i~l~~g~p~~~~~~------------------~-------~~~~~~~~~~~~l~~~---~~~~Y~~~~g~~~lr~~ia~ 84 (403)
T TIGR01265 33 IIPLSHGDPSVFGNL------------------R-------TDPEAEEAVKDALRSG---KFNGYAPSVGALAAREAVAE 84 (403)
T ss_pred eEEeCCCCCCccCCC------------------C-------CCHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHH
Confidence 999999999631100 1 1677888877777542 23579999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++..++.++++++|++|+|+++++.++++++. .+||+|++++|+|..+...+...|.+++.++++.+++|++|++.++
T Consensus 85 ~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 163 (403)
T TIGR01265 85 YLSSDLPGKLTADDVVLTSGCSQAIEICIEALA-NPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLE 163 (403)
T ss_pred HHHhhcCCCCCHHHEEEecChHHHHHHHHHHhC-CCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHH
Confidence 999878888889999999999999999999998 8999999999999999999999999999999876667899999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++..+ ++
T Consensus 164 ~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-------~~ 229 (403)
T TIGR01265 164 ALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA-PFIPMASF-------AS 229 (403)
T ss_pred HHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-Cccchhhh-------cc
Confidence 98866 789999999999999999999999999999999999999999999998653 44454443 34
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCH-----HHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-----EVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~-----~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
+.++|+++||||.| ++||+|+||+++.. ++ ++++.+........+++.+.|.++..+|.+. ...
T Consensus 230 ~~~vi~~~S~SK~~-~~pGlRiG~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---------~~~ 298 (403)
T TIGR01265 230 IVPVLSLGGISKRW-VVPGWRLGWIIIHD-PHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENT---------PQE 298 (403)
T ss_pred CCcEEEEeeccccc-CCCcceEEEEEEeC-chhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhC---------hHH
Confidence 44689999999998 78999999998721 21 2444454444345678999999999888531 124
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC
Q 009517 414 ERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
++++.+++++++++.+.+.|+.++|+.+..|.||+|+|++++... . .+..++..++..+++++||.+.||..|
T Consensus 299 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~--~-----~~~~~~~~~~~~l~~~~gv~v~pg~~f 371 (403)
T TIGR01265 299 FFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELEL--F-----PEIKDDVDFCEKLVREESVICLPGSAF 371 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccc--c-----CCCCCHHHHHHHHHHhCCEEEeCcccc
Confidence 567788889999999999999887888888999999997765210 0 011134566677788899999999999
Q ss_pred CCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 494 ~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+. . ++|||+++.+++++++++++|.++++++
T Consensus 372 ~~-~--~~iRis~~~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 372 GL-P--NWVRITITVPESMLEEACSRIKEFCERH 402 (403)
T ss_pred CC-C--CeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 73 3 3999999977889999999999888653
No 53
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.3e-48 Score=402.08 Aligned_cols=354 Identities=23% Similarity=0.342 Sum_probs=294.5
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
++||++|.|+. +. |+.+.+++.+.+.. ....|++..|.++||+++++
T Consensus 26 ~i~l~~g~p~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~ 72 (387)
T PRK07777 26 AVNLGQGFPDE----------------------DG-------PPEMLEAAQEAIAG----GVNQYPPGPGIPELRAAIAA 72 (387)
T ss_pred eEEccCCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHH
Confidence 89999999985 22 45677777666654 24679999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCC-CCCCCCHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETSE 256 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~ld~~~ 256 (533)
++.+.+|.+++++ +|++|+|+++++..++..++ ++||+|+++.|+|+.|..+++..|.+++.++++++ .+|.+|+++
T Consensus 73 ~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 151 (387)
T PRK07777 73 QRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLV-EPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDA 151 (387)
T ss_pred HHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHH
Confidence 9998889888776 79999999999999999988 89999999999999999999999999999999876 478899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
+++.+++ ++++|++++||||||.+++.+++++|+++|++|++++|+||+|.++.|.+. .+.++..+ .+
T Consensus 152 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~-~~---- 219 (387)
T PRK07777 152 LRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA-RHLPLATL-PG---- 219 (387)
T ss_pred HHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC-CcccHhhC-CC----
Confidence 9998876 789999999999999999999999999999999999999999999988553 33343332 11
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 415 (533)
...++|++.||||+| |+||+|+||+++ ++++++.+..... ..++++.+.|.++..++...+ +++
T Consensus 220 -~~~~~i~~~S~SK~~-g~~GlRiG~~~~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----------~~~ 284 (387)
T PRK07777 220 -MRERTVTISSAAKTF-NVTGWKIGWACG---PAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHED----------AWV 284 (387)
T ss_pred -CcCcEEEEeechhhc-cCcCceeEEEec---CHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCc----------HHH
Confidence 123689999999999 899999999998 9999988887665 456677888888888875422 445
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 416 DGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 416 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
+.+++.++++++.+.+.|+++ |+++.+|+|+||+|++++.. +..++..++.++++++||.+.||..|+.
T Consensus 285 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~l~~~~gv~v~pg~~f~~ 353 (387)
T PRK07777 285 AALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRPL----------GYDDGTEFCRALPERVGVAAIPMSVFYD 353 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEeccccc----------CCCCHHHHHHHHHHhCCEEEeCchHhCC
Confidence 678889999999999999998 88889999999999765410 0123566777877889999999999963
Q ss_pred --CCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 496 --VPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 496 --~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
..+.++|||+++.+++++++++++|+++.
T Consensus 354 ~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 354 PADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred CCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 23356999999988889999999998764
No 54
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-48 Score=402.84 Aligned_cols=388 Identities=25% Similarity=0.415 Sum_probs=319.6
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++....+.++..+...+.++...+.+ +++|+.|+|.. +.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~~~----------------------~~------- 45 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKAQGRD---------VISLGAGEPDF----------------------DT------- 45 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHhccCC---------EEEeCCCCCCC----------------------CC-------
Confidence 35567677777777777777776655444 99999999874 21
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++.+.+++.+.+.+ ....|++..|..+||+++|+++.+.+|..+++++|++|+|+++++..++..++ ++||.|++
T Consensus 46 ~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~-~~gd~vl~ 120 (393)
T PRK05764 46 PEHIKEAAIEALDD----GKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALL-DPGDEVII 120 (393)
T ss_pred CHHHHHHHHHHHhc----CCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhc-CCCCEEEe
Confidence 57777777777764 24569999999999999999999888888889999999999999999999988 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|..|..+++..|.+++.++++++++|.+|++.+++++++ ++++|++++|+||||.++|.+++++|+++|+
T Consensus 121 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~ 194 (393)
T PRK05764 121 PAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAV 194 (393)
T ss_pred cCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 9999999999999999999999998767889999999999865 7899999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|..+.|++. ...++..+..+ ...++|++.||||.+ |++|+|+||+++ ++++++.+....
T Consensus 195 ~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~-----~~~~~i~~~s~SK~~-~~~G~RiG~i~~---~~~~~~~~~~~~ 264 (393)
T PRK05764 195 EHDIWVLSDEIYEKLVYDGA-EFTSIASLSPE-----LRDRTITVNGFSKAY-AMTGWRLGYAAG---PKELIKAMSKLQ 264 (393)
T ss_pred HCCcEEEEeccccceeeCCC-CcccHHHcCCC-----CcCCEEEEecCcccc-cCccceeEEEec---CHHHHHHHHHHH
Confidence 99999999999999888543 23344443222 123689999999999 899999999998 999999998776
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .+.+++++.|.++..+|+.. .++++++++.++++++.+.+.|++++|+.+..|+|++|+|++++....
T Consensus 265 ~~~~~~~~~~~q~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~ 334 (393)
T PRK05764 265 SHSTSNPTSIAQYAAVAALNGP----------QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLG 334 (393)
T ss_pred hhcccCCChHHHHHHHHHHcCC----------hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccc
Confidence 5 55788999999999888521 144567788899999999999999889999999999999976652110
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
..+ .++.+++..+++++||.+.||..|+. .++|||+++.+++++++++++|.++++++
T Consensus 335 ------~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~vRis~~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 335 ------KSI-TDSLEFAEALLEEAGVAVVPGIAFGA---PGYVRLSYATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred ------ccc-CCHHHHHHHHHHhCCEEEccccccCC---CCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 000 02355666777889999999999974 34999999988999999999999988754
No 55
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-49 Score=410.59 Aligned_cols=363 Identities=20% Similarity=0.281 Sum_probs=277.5
Q ss_pred cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHH
Q 009517 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (533)
Q Consensus 97 ~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 176 (533)
.++|+|++|.|++ ++ |+.+.+ +.+.+.. . .|+++.|.++||++|
T Consensus 100 ~~~i~l~~g~p~~----------------------~~-------~~~v~e-~~~~~~~-----~-~Y~~~~g~~~lreai 143 (527)
T PRK09275 100 RDAVSYVRDQLGF----------------------DA-------DEFVYE-LVDGIIG-----D-NYPVPDRMLKHTEKI 143 (527)
T ss_pred HHHHhhcCCCCCC----------------------CC-------CHHHHH-HHHHHhc-----C-CCCCCCCCHHHHHHH
Confidence 4589999999986 33 455555 5555532 2 499999999999999
Q ss_pred HHHHHhh-cCCCC-C--CCCEEEcCChHHHHHHHHHH-----hccCCCCeEEEcCCcCcchHHHHHHhC--CeEEEEecC
Q 009517 177 AAGIEAR-DGFPA-D--PNDIFLTDGASPAVHMMMQL-----LIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLD 245 (533)
Q Consensus 177 a~~~~~~-~g~~~-~--~~~i~~t~G~~~al~~~~~~-----l~~~~gd~Vlv~~p~~~~~~~~~~~~g--~~~~~v~~~ 245 (533)
++++.++ ++... . .++|++|+|+++|+..++.+ ++ +|||+|++++|+|+.|..++...| .+++.++.+
T Consensus 144 a~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll-~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~ 222 (527)
T PRK09275 144 VKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLL-KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINAD 222 (527)
T ss_pred HHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcC-CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecC
Confidence 9966543 33222 2 34999999999999999886 56 899999999999999999988875 555666666
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEccccccccccCCCCc
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK--EGLVLLADEVYQENVYVPEKKF 323 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~ 323 (533)
++++|.+|++++++++++ ++|+|++++||||||.+++.+++++|+++|++ ++++||+||+|..|.+ .+
T Consensus 223 ~~~~f~~d~~~l~~~~~~------~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~ 292 (527)
T PRK09275 223 EENEWQYPDSELEKLRDP------SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD----DF 292 (527)
T ss_pred cccCCCCCHHHHHhhcCC------CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc----cc
Confidence 667899999999998765 89999999999999999999999999999965 4999999999999764 13
Q ss_pred ccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH-----HHHHH----------------------
Q 009517 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE-----VREQI---------------------- 376 (533)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~-----~~~~l---------------------- 376 (533)
.++... .++ ++|++.||||.| ||+|||+||+++ +++ +++.+
T Consensus 293 ~s~~~~-------~~~-~~I~v~SfSK~f-~mtG~RlG~i~~---~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~ 360 (527)
T PRK09275 293 RSLFAV-------LPY-NTILVYSFSKYF-GATGWRLGVIAL---HEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKL 360 (527)
T ss_pred cCHHHh-------CCC-CEEEEeehhhhc-cCcHhHHhhhhc---CchhHHHHHHHhccHHHHHHHHhhhhhccCCcchh
Confidence 343332 133 689999999999 899999999998 554 33222
Q ss_pred ----------HHhhh-ccccCChHHHHHH-----HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 377 ----------YKVAS-VNLCSNISGQILA-----SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 377 ----------~~~~~-~~~~~~~~~q~a~-----~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.++.. .+.+.+.+.|.++ .++|+.. ..+.+.+++.|++|++.+.+.|. + ++.
T Consensus 361 ~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~----------~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~ 428 (527)
T PRK09275 361 KFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEE----------DAYKKAMKDIIRRRYKALYEGLG-L-PEP 428 (527)
T ss_pred hhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCc----------hHHHHHHHHHHHHHHHHHHHHcC-C-CCc
Confidence 23333 6688888888863 3445432 24467788899999999999883 2 344
Q ss_pred EecCCceeEEecccCCCHH-HHH--HH-HhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHH
Q 009517 441 CNKAEGAMYLFPRIQLPEK-AIK--AA-EAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPA 515 (533)
Q Consensus 441 ~~~~~gg~~~~~~~~~~~~-~~~--~~-~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~ 515 (533)
..+|+|+||+|++++.-.. ... .. ......++.+++.+++++.||.+.||..||.. .++||||++ .+++++.+
T Consensus 429 ~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~--~~~vRis~a~~~~~~~~~ 506 (527)
T PRK09275 429 EDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGP--EWSVRVSLANLNEEDYAK 506 (527)
T ss_pred CCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCC--CCeEEEEEecCCHHHHHH
Confidence 4679999999987651100 000 00 00011246788899999999999999999843 458999998 78899999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 009517 516 IVTRLTDFHKNFMDKFR 532 (533)
Q Consensus 516 ~~~~l~~~l~~~~~~~~ 532 (533)
+.++|+++++++.++|+
T Consensus 507 ~~~rl~~~l~~y~~~~~ 523 (527)
T PRK09275 507 IGKAIRKLLDEYYEEYK 523 (527)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999885
No 56
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.1e-48 Score=402.15 Aligned_cols=351 Identities=20% Similarity=0.273 Sum_probs=294.4
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|+. +. ++.+.+++.+.+.. ....|++..|.++||+++++
T Consensus 32 ~i~l~~g~~~~----------------------~~-------~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~~a~ 78 (386)
T PRK09082 32 AINLSQGFPDF----------------------DG-------PPYLVEALAYAMAA----GHNQYPPMTGVAALREAIAA 78 (386)
T ss_pred EEEecCCCCCC----------------------CC-------CHHHHHHHHHHHHc----CCCCCCCCCCcHHHHHHHHH
Confidence 89999999874 21 46677777666654 24679999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++.+.+|.+.+++ +|++|+|+++++..++..++ ++||+|++++|+|..+...++..|.+++.++++.+ +|++|++++
T Consensus 79 ~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l 156 (386)
T PRK09082 79 KTARLYGRQYDADSEITVTAGATEALFAAILALV-RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQRF 156 (386)
T ss_pred HHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cccCCHHHH
Confidence 9998889877775 89999999999999999998 89999999999999999999999999999999754 689999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++.+++ ++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++. +..++..+ ..
T Consensus 157 ~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~-~~~s~~~~-~~----- 223 (386)
T PRK09082 157 AAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA-GHASVLRH-PE----- 223 (386)
T ss_pred HHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC-CCCChhhC-cC-----
Confidence 999876 789999999999999999999999999999999999999999999998653 34444332 11
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
...++|+++||||.+ |++|+|+||+++ ++++++.+.+... ..++++.+.|.++..++... .++.+
T Consensus 224 ~~~~~i~~~S~SK~~-~~~G~RiG~iv~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----------~~~~~ 289 (386)
T PRK09082 224 LRERAFVVSSFGKTY-HVTGWKVGYCVA---PAALSAEFRKVHQYNTFTVNTPAQLALADYLRAE----------PEHYL 289 (386)
T ss_pred ccCcEEEEeechhhc-cchhhhhhhhhC---CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCC----------hHHHH
Confidence 123689999999999 899999999998 9999999988765 56788999999988888521 14456
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ- 495 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~- 495 (533)
++++.++++++.+.+.|++. |+.+.+++||||+|++++... +. ++.+++..+++++||.+.||+.|+.
T Consensus 290 ~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~---------~~-~~~~~~~~l~~~~~v~v~pg~~f~~~ 358 (386)
T PRK09082 290 ELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAIS---------DL-DDVEFCQWLTREHGVAAIPLSVFYAD 358 (386)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccC---------CC-CHHHHHHHHHHhCCEEEeCcHHhCCC
Confidence 67888999999999999987 899999999999997764101 11 3556677778899999999999863
Q ss_pred CCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 496 VPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 496 ~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
..+.++|||+++.+++++++++++|++
T Consensus 359 ~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 359 PFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred CCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 334569999999888889999998874
No 57
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=5e-48 Score=398.58 Aligned_cols=357 Identities=22% Similarity=0.352 Sum_probs=294.0
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|+|+. .. |+.+++++.+.+... ....|++..|.++||+++++
T Consensus 31 ~i~l~~g~p~~----------------------~~-------~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~ 78 (395)
T PRK08175 31 IIDFSMGNPDG----------------------PT-------PPHIVEKLCEVAQRP---DTHGYSTSRGIPRLRRAISR 78 (395)
T ss_pred eEEcCCCCCCC----------------------CC-------CHHHHHHHHHHHhCC---CcCCCCCCCCCHHHHHHHHH
Confidence 99999999884 21 566777777766432 35789999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++++|+.++++ +|++|+|+++++..++..++ ++||+|++++|+|+.+...+...|++++.+++++++. +++++
T Consensus 79 ~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l 154 (395)
T PRK08175 79 WYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATL-DHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNEL 154 (395)
T ss_pred HHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHH
Confidence 9998889888887 89999999999999999988 8999999999999999999999999999999986533 47888
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
+++++.. .+++++|++++||||||.+++.+++++|+++|++||++||+||+|.++.|++. ...++..+ . .
T Consensus 155 ~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~-~~~~~~~~-~-----~ 224 (395)
T PRK08175 155 ERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW-KAPSIMQV-P-----G 224 (395)
T ss_pred HHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC-CCcchhcC-C-----C
Confidence 8887642 23689999999999999999999999999999999999999999999988543 23343322 1 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
....+|++.||||.| |+||+|+||+++ ++++++.+.+... ..++++.+.|.++..+|... .++++
T Consensus 225 ~~~~~i~~~S~SK~~-g~pGlRiG~~~~---~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----------~~~~~ 290 (395)
T PRK08175 225 AKDVAVEFFTLSKSY-NMAGWRIGFMVG---NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD----------QQCVR 290 (395)
T ss_pred cccCEEEEeeccccc-cCcchhheeeeC---CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCc----------HHHHH
Confidence 123578899999999 899999999997 9999999988775 45677888898888888532 24567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
.+++.|+++++.+.+.|+++ |+.+..|+||+|+|++++.... ..++..++.++++++||.+.||..|+ .
T Consensus 291 ~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~~---------~~~~~~~~~~l~~~~gv~v~p~~~f~-~ 359 (395)
T PRK08175 291 DIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPYA---------AMGSLEFAKKLLNEAKVCVSPGIGFG-D 359 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCcccC---------CCCHHHHHHHHHHhCCEEEeCchhhC-c
Confidence 78899999999999999998 8888889999999977652110 01245666677888999999999997 3
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
.+.+++||+++.+++.+++++++|.+++++
T Consensus 360 ~~~~~lRis~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 360 YGDTHVRFALIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred CCCCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 455699999997788999999999998864
No 58
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=6e-48 Score=391.72 Aligned_cols=343 Identities=21% Similarity=0.357 Sum_probs=284.7
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|+|.. +. ++.+.+++.+.+.. ...|++..|..+||+++++
T Consensus 2 ~~~~~~g~p~~----------------------~~-------~~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~aia~ 47 (350)
T TIGR03537 2 LFDFGTGDPKE----------------------PT-------PPFIRKALIDAVPE-----VSQYPSALGTKALREAISG 47 (350)
T ss_pred eEeccCCCCCC----------------------CC-------CHHHHHHHHHHHhc-----cCCCCCCCCCHHHHHHHHH
Confidence 78999999874 22 56677777666543 5679999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCC---CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSEN---DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~g---d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~ 254 (533)
++.+.+|++++++ +|++|+|+++++..++..++ ++| |+|+++.|+|+.|...++..|++++.++++.+++|.+|+
T Consensus 48 ~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 126 (350)
T TIGR03537 48 WFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRL 126 (350)
T ss_pred HHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCH
Confidence 9999889999998 99999999999999999998 776 699999999999999999999999999998667889999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcC
Q 009517 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (533)
Q Consensus 255 ~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~ 334 (533)
+++++++++ +++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++ +..++..+
T Consensus 127 ~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~----- 193 (350)
T TIGR03537 127 EKVEKSILE------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE--PPHSALEV----- 193 (350)
T ss_pred HHHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC--CCCchhhc-----
Confidence 999999877 79999999999999999999999999999999999999999999887743 23333222
Q ss_pred CCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 335 ~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
+. .++|++.||||++ |++|+|+||+++ ++++++.+..... ...+++.+.|.++..++... +
T Consensus 194 --~~-~~~i~~~s~SK~~-g~~GlRiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-----------~ 255 (350)
T TIGR03537 194 --GI-ENVLAFHSLSKRS-GMTGYRSGFVAG---DEKLISFLRKLRANFGVASPDFVQAAAKAAWSDD-----------N 255 (350)
T ss_pred --Cc-CCEEEEeeccccc-CCccccceeeec---CHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCc-----------H
Confidence 22 3689999999998 889999999987 8999999888765 44566667888877776531 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC
Q 009517 414 ERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
++++.++.++++++.+.+.|++. |+++..|+||+|+|++++.. .++..+++.+ .++||.+.||..|
T Consensus 256 ~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~------------~~~~~l~~~L-~~~gv~v~~g~~f 321 (350)
T TIGR03537 256 HVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSG------------IDAKDYALRL-LENGIVVAPGENF 321 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCC------------CCHHHHHHHH-HHCCEEEcCchhh
Confidence 34567788999999999999988 88889999999999776521 1234555555 4589999999999
Q ss_pred CCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 494 ~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
+. .+.++|||+++.+++++++++++|++
T Consensus 322 ~~-~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 322 GS-GEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred CC-CCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 73 33459999998778889999988875
No 59
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-48 Score=401.35 Aligned_cols=324 Identities=17% Similarity=0.226 Sum_probs=261.3
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEE--EcCChHHHHHHHHH---HhccCCCCeEEEcCCcCcchHHHHHH
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF--LTDGASPAVHMMMQ---LLIRSENDGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~~~---~l~~~~gd~Vlv~~p~~~~~~~~~~~ 234 (533)
..+|++..|.++||+++++++.+..+..+++++|+ .|.|+++++..++. .++ ++||+|++++|+|+.|..+++.
T Consensus 65 ~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-~~Gd~Vlv~~P~y~~~~~~~~~ 143 (404)
T PTZ00376 65 DKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-PAGTTVYVSNPTWPNHVNIFKS 143 (404)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHH
Confidence 57899999999999999999977666667889998 58999999988875 556 7999999999999999999999
Q ss_pred hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 235 ~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
+|++++.+++.++++|++|++.++++++.. .++++++++++||||||.++|.+++++|+++|++|+++||+||+|.+
T Consensus 144 ~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~ 220 (404)
T PTZ00376 144 AGLNVKEYRYYDPKTKGLDFDGMLEDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQG 220 (404)
T ss_pred cCCceeeccccCcccCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcC
Confidence 999999999965557899999999999752 12467777899999999999999999999999999999999999999
Q ss_pred ccccCC-CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH----HHhhh-ccccCCh
Q 009517 315 NVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI----YKVAS-VNLCSNI 388 (533)
Q Consensus 315 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l----~~~~~-~~~~~~~ 388 (533)
|.|++. ....++..+. . ...++|+++||||+| +|||||+||+++...++++++.+ .+... ...+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~-~-----~~~~vi~i~SfSK~~-~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 293 (404)
T PTZ00376 221 FASGDLDKDAYAIRLFA-E-----RGVEFLVAQSFSKNM-GLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPI 293 (404)
T ss_pred ccCCCHHHHHHHHHHHH-h-----cCCcEEEEEeCCCcc-cccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCch
Confidence 988531 1122222221 1 122689999999999 89999999985322377755543 33333 3455678
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEecCCceeEEecccCCCHHHHHHHH
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITCNKAEGAMYLFPRIQLPEKAIKAAE 465 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~gg~~~~~~~~~~~~~~~~~~ 465 (533)
++|.++..+|+++. ..+.|.+++++++++++++++.+.+.|+++. ++.+..|+||||+|++++
T Consensus 294 ~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~---------- 359 (404)
T PTZ00376 294 HGARIADRILSDPE----LRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT---------- 359 (404)
T ss_pred HHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC----------
Confidence 99999999997431 2345667788889999999999999999872 366778999999997643
Q ss_pred hcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHH
Q 009517 466 AEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 466 ~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~ 526 (533)
..++.+|++++||.+.|| + |||++ .+.+++++++++|++++..
T Consensus 360 -------~~~~~~L~~~~~v~v~p~-------~----Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 360 -------KEQVERLIEKYHIYLLDN-------G----RISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred -------HHHHHHHHHhCCEeecCC-------C----eEEEeccCHHhHHHHHHHHHHHHhc
Confidence 245778888889999986 2 99997 9999999999999998753
No 60
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=6.7e-48 Score=401.99 Aligned_cols=326 Identities=17% Similarity=0.194 Sum_probs=269.2
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
+.+.+++.+.... ...|++..|..+||++++++++...+ .+++|++|+|+++++..++++++ ++||+|+++
T Consensus 101 p~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~~~~l~-~pgd~Vlv~ 171 (431)
T PRK15481 101 PDLSRYFARLSRT-----PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERLLCAHL-LPGDSVAVE 171 (431)
T ss_pred HHHHHHHHHhhhh-----hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHHHHHhC-CCCCEEEEe
Confidence 3455555443332 45799999999999999999875422 34699999999999999999998 899999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+|+|+.|...++.+|++++.++++++ ++|++.|+++++. ++++++++ +||||||.++|.+++++|+++|+
T Consensus 172 ~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~ 242 (431)
T PRK15481 172 DPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLA 242 (431)
T ss_pred CCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999754 6899999999876 68899988 99999999999999999999999
Q ss_pred Hc-CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 301 KE-GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 301 ~~-~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
++ +++||+||+|.+|.+.+. .+.. .. ...++|+++||||+| | ||+|+||+++ ++++++.+...
T Consensus 243 ~~~~~~ii~De~Y~~~~~~~~---~~~~---~~-----~~~~vi~~~SfSK~~-~-~GlRiG~~i~---~~~~~~~~~~~ 306 (431)
T PRK15481 243 RYPQVLVIIDDHFALLSSSPY---HSVI---PQ-----TTQRWALIRSVSKAL-G-PDLRLAFVAS---DSATSARLRLR 306 (431)
T ss_pred hcCCceEEecCchhhhccCCC---CCCC---cC-----CCCCEEEEeeecccc-C-CCceeEEEeC---CHHHHHHHHHH
Confidence 99 999999999999876432 1211 11 123689999999999 7 8999999998 99999998765
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCH
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPE 458 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~ 458 (533)
.. ..++.+.+.|.++..+|+++. +.++++++++.|+++++.+.+.|++. |+.+..|+||+|+|++++.
T Consensus 307 ~~~~~~~~s~~~q~a~~~~l~~~~--------~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~-- 375 (431)
T PRK15481 307 LNSGTQWVSHLLQDLVYACLTDPE--------YQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT-- 375 (431)
T ss_pred HhccccCCCHHHHHHHHHHHhCcc--------HHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC--
Confidence 54 446789999999999997643 44567788999999999999999998 8888889999999976641
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHH
Q 009517 459 KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~ 525 (533)
++..++.. |.++||.+.||..|+...+.++|||+++ .+++++++++++|++++.
T Consensus 376 ------------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 ------------DSQATALT-LAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ------------CHHHHHHH-HHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 13344444 4578999999999974333458999998 788899999999998864
No 61
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-47 Score=364.39 Aligned_cols=358 Identities=21% Similarity=0.330 Sum_probs=310.9
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
+++-|++.+.++ .+ |+++++++.+++.. +..+|+ .+..++.++++
T Consensus 26 DvlPmWVADMDf----------------------~~-------pp~i~~Al~~rvdh----GvfGY~--~~~~~~~~ai~ 70 (388)
T COG1168 26 DVLPMWVADMDF----------------------PT-------PPEIIEALRERVDH----GVFGYP--YGSDELYAAIA 70 (388)
T ss_pred CcceeeeecccC----------------------CC-------CHHHHHHHHHHHhc----CCCCCC--CCCHHHHHHHH
Confidence 388888888886 44 89999999999987 477888 45788999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCC-CCCCCCCHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE-ATGWGLETSE 256 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ld~~~ 256 (533)
+|..++++..+.++.|++++|...++..+++.+. ++||.|++..|.|+++....+..|.+++..|+.. +..|.+|+++
T Consensus 71 ~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~ 149 (388)
T COG1168 71 HWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDA 149 (388)
T ss_pred HHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHH
Confidence 9999999999999999999999999999999999 8999999999999999999999999999999884 4568889999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
||+++.+. +++++++||||||||.+++.++|.+|.++|.+||+.||+||+++++++.|. ++.++..+....
T Consensus 150 LE~~~~~~-----~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~-~h~~~a~ls~~~--- 220 (388)
T COG1168 150 LEKAFVDE-----RVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH-KHIPFASLSERF--- 220 (388)
T ss_pred HHHHHhcC-----CccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC-CccchhhcChhh---
Confidence 99999884 679999999999999999999999999999999999999999999999874 567766654433
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH-HHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI-YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l-~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 414 (533)
. .+.|.+.|-||+| .++|+.++++++ .++++..+. +++.. ...++|.++..|..++.+.+. .|
T Consensus 221 -a-~~~it~~saSKtF-NlaGL~~a~~Ii--~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~----------~W 285 (388)
T COG1168 221 -A-DNSITLTSASKTF-NLAGLKCAYIII--SNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGE----------PW 285 (388)
T ss_pred -h-cceEEEeeccccc-cchhhhheeEEe--cCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhch----------HH
Confidence 2 3689999999999 799999999998 467764444 33443 567889999999988877554 77
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC
Q 009517 415 RDGILSSLARRAKTLEDAFNSL-EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
++++.+.++.+++++.+.|++. |++++..|+|.+.+|++++. .+.+ ++...+.++++.+|.+.+|..|
T Consensus 286 Ld~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~----------l~l~-d~~l~~~ll~~akVal~~G~~F 354 (388)
T COG1168 286 LDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRE----------LGLD-DSELAEFLLEEAKVALSPGSTF 354 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccc----------cCCC-hHHHHHHHHHhhcEeccCCCcc
Confidence 8889999999999999999885 99999999999999998871 1222 3445568899999999999999
Q ss_pred CCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 494 ~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
| ..|.+++|++++.+.+.+++++++|+.++++.
T Consensus 355 G-~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 355 G-EEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred C-cCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 9 67888999999999999999999999888753
No 62
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1e-47 Score=396.33 Aligned_cols=338 Identities=18% Similarity=0.222 Sum_probs=264.6
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHhc-cCCCCeE
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLI-RSENDGI 218 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~-~~~gd~V 218 (533)
+.+.+++.+.+... ....|++..|.++||+++++++.+..+..+++++| ++|+|+++|+..+++.+. .++||+|
T Consensus 47 ~~l~~a~~~~~~~~---~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~V 123 (396)
T PRK09257 47 RAVKKAEARLLETE---TTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKV 123 (396)
T ss_pred HHHHHHHHHhcccc---cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeE
Confidence 45555555554331 24579999999999999999998776666688887 999999999999987662 1799999
Q ss_pred EEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 009517 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (533)
Q Consensus 219 lv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l 298 (533)
++++|+|+.|..+++.+|++++.+|+..+++|++|++.++++++.. .++++++++++||||||.++|.+++++|+++
T Consensus 124 lv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~ 200 (396)
T PRK09257 124 WVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAEL 200 (396)
T ss_pred EECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999854446899999999998752 1135566668999999999999999999999
Q ss_pred HHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH----HHH
Q 009517 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VRE 374 (533)
Q Consensus 299 ~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~----~~~ 374 (533)
|++||++||+||+|.+|.++.+....++..+. . ...++|+++||||+| +++|||+||+++...+++ ++.
T Consensus 201 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~-~-----~~~~vi~i~SfSK~~-~~~GlRiG~~~~~~~~~~~~~~~~~ 273 (396)
T PRK09257 201 LKERGLIPFLDIAYQGFGDGLEEDAYGLRAFA-A-----AGLELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLS 273 (396)
T ss_pred HHhCCcEEEEeccccccccchHHHHHHHHHHH-h-----cCCcEEEEEEcCCcC-ccccccceeEEEEeCCHHHHHHHHH
Confidence 99999999999999998874222223333331 1 123589999999999 889999999984222443 334
Q ss_pred HHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--CceEecCCceeEE
Q 009517 375 QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-E--GITCNKAEGAMYL 450 (533)
Q Consensus 375 ~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~gg~~~ 450 (533)
++..... ..++++.+.|.++..+|.++. ....|.+++++++++|+++++.+.+.|++. + ++.+..|+||||+
T Consensus 274 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~ 349 (396)
T PRK09257 274 QLKATIRTNYSNPPAHGAAIVATILNDPE----LRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFS 349 (396)
T ss_pred HHHHHhhhhcCCCcHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEE
Confidence 4434333 445678999999999997532 222356778889999999999999999987 2 3788899999999
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l 524 (533)
|++++ ..++.++++++||++.| .+ ||+++ .++++|++++++|++++
T Consensus 350 w~~l~-----------------~~~~~~l~~~~~V~~~p-------~~----ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 350 YSGLT-----------------PEQVDRLREEFGVYAVG-------SG----RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred ecCCC-----------------HHHHHHHHHcCCEEEcC-------CC----eEEEeeCCHHHHHHHHHHHHhhC
Confidence 97653 12356788999999987 22 99997 89999999999998753
No 63
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=3.1e-47 Score=395.02 Aligned_cols=362 Identities=22% Similarity=0.292 Sum_probs=272.7
Q ss_pred cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHH
Q 009517 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (533)
Q Consensus 97 ~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 176 (533)
.++|+|++|+|++ + |++.+.++.+.+.. . .|+++.|..++++++
T Consensus 94 ~~~i~l~~g~p~~----------------------~--------~~~~~~~~~~~~~~-----~-~Y~~p~g~~~~~e~i 137 (521)
T TIGR03801 94 RDIISYVIDQLGF----------------------D--------PDAFLYEMCDGIIG-----D-NYPVPDRMLPHSEKI 137 (521)
T ss_pred HHHHhhcCCCCCC----------------------C--------CCHHHHHHHHHhhc-----C-CCCCCCCCHHHHHHH
Confidence 4589999999986 2 34556666665532 2 598777888888888
Q ss_pred HH-HHHhhcCCC-CCCC--CEEEcCChHHHHHHHHHH-----hccCCCCeEEEcCCcCcchHHHHHHh--CCeEEEEecC
Q 009517 177 AA-GIEARDGFP-ADPN--DIFLTDGASPAVHMMMQL-----LIRSENDGILCPIPQYPLYSASIALH--GGTLVPYYLD 245 (533)
Q Consensus 177 a~-~~~~~~g~~-~~~~--~i~~t~G~~~al~~~~~~-----l~~~~gd~Vlv~~p~~~~~~~~~~~~--g~~~~~v~~~ 245 (533)
++ ++.+.++.. ..++ +|++|+|+++|+..++.+ ++ +|||+|++++|+|+.|..++... |.+++.++.+
T Consensus 138 v~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll-~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~ 216 (521)
T TIGR03801 138 VHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELL-KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKAD 216 (521)
T ss_pred HHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcC-CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecc
Confidence 74 656554433 3334 899999999999999887 56 89999999999999999998776 6788888886
Q ss_pred CCCC-----CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccccccc
Q 009517 246 EATG-----WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYV 318 (533)
Q Consensus 246 ~~~~-----~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~--~~~lI~De~y~~~~~~ 318 (533)
+.++ |.+|++++++++++ ++|+|+++|||||||.++|.+++++|+++|++| +++||+||+|..|.+
T Consensus 217 ~~~~~g~~~~~~d~~~l~~~~~~------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~- 289 (521)
T TIGR03801 217 EMTEDGTHTWQYPDKELEKLRDP------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD- 289 (521)
T ss_pred cccccccccCCCCHHHHHHhcCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc-
Confidence 5443 99999999987765 899999999999999999999999999999987 899999999999764
Q ss_pred CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH-----HH--------HHH---------
Q 009517 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE-----VR--------EQI--------- 376 (533)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~-----~~--------~~l--------- 376 (533)
.+.++... .++ ++|++.||||.| |++|||+||+++ +++ ++ +.+
T Consensus 290 ---~~~sl~~~-------~~~-~vI~v~SfSK~f-g~~G~RlG~i~~---~~~~v~d~li~~lp~~~~~~l~~ry~~~~~ 354 (521)
T TIGR03801 290 ---DFRSLFAE-------LPY-NTIGVYSFSKYF-GATGWRLGTIAL---HKDNIFDKLIAELPEEKKKELDKRYSSLTT 354 (521)
T ss_pred ---cccchhhh-------CCC-CEEEEEcchhhc-cCchhhhhhhhc---CchHHHHHHHHhccHHHHHHHhhhhccccC
Confidence 13344332 233 689999999999 899999999998 433 22 222
Q ss_pred ---------------HHhhh-ccccCChHHHH-----HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 377 ---------------YKVAS-VNLCSNISGQI-----LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 377 ---------------~~~~~-~~~~~~~~~q~-----a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
.++.. .+.+.+.+.|. ++.++|+.. ....+.+++.+++|++.+.+.| .
T Consensus 355 ~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~----------~~y~~~~~~~~~~R~~~l~~~L-g 423 (521)
T TIGR03801 355 EPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKE----------NAYKAETKDICRRREKLLFRGL-G 423 (521)
T ss_pred ChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccc----------hhHHHHHHHHHHHHHHHHHHhc-C
Confidence 22332 55677777776 344555432 1345678889999999999998 2
Q ss_pred CCCceEecCCceeEEecccCCCHHHH---HHHH-hcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCc
Q 009517 436 LEGITCNKAEGAMYLFPRIQLPEKAI---KAAE-AEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQE 510 (533)
Q Consensus 436 ~~g~~~~~~~gg~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~ 510 (533)
+ .+...+++|+||+|++++.-.... +-.. .....++.+++.+++++.||.+.||..|+.. .+++|||++ .++
T Consensus 424 ~-~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~--~~~vRisla~l~~ 500 (521)
T TIGR03801 424 L-PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP--EWSVRVSLANLNE 500 (521)
T ss_pred C-CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC--CCeEEEEecCCCH
Confidence 2 233467999999998775111000 0000 0011246788899999999999999999853 348999998 788
Q ss_pred CcHHHHHHHHHHHHHHHHHHh
Q 009517 511 DKIPAIVTRLTDFHKNFMDKF 531 (533)
Q Consensus 511 e~i~~~~~~l~~~l~~~~~~~ 531 (533)
+++.++.++|+++++++.++|
T Consensus 501 ~~~~~~~~rl~~~~~~~~~~~ 521 (521)
T TIGR03801 501 YDYAEIGRAIRKILDEYYEAW 521 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 899999999999999998876
No 64
>PLN02397 aspartate transaminase
Probab=100.00 E-value=2.7e-46 Score=387.52 Aligned_cols=321 Identities=18% Similarity=0.210 Sum_probs=251.0
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCE-----EEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI-----FLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i-----~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~ 234 (533)
..+|++..|.++||+++++++.+.++.....++| +.++|+.+ +...+..++ .|||+|++++|+|+.|..+++.
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~-~pGd~Vlv~~P~y~~y~~~~~~ 161 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARF-YPGSTIYIPNPTWGNHHNIFRD 161 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHh-CCCCEEEEeCCCchhHHHHHHH
Confidence 5589999999999999999997655443334443 33444433 334444444 5999999999999999999999
Q ss_pred hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 235 ~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
+|++++.+++..+++|++|++.+++.+++. .++++++++++||||||.+++.+++++|+++|++||++||+||+|.+
T Consensus 162 ~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~ 238 (423)
T PLN02397 162 AGVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQG 238 (423)
T ss_pred cCCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCC
Confidence 999999999854446899999999888742 12678888889999999999999999999999999999999999999
Q ss_pred ccccCC-CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH----HHHHhhh-ccccCCh
Q 009517 315 NVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE----QIYKVAS-VNLCSNI 388 (533)
Q Consensus 315 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~----~l~~~~~-~~~~~~~ 388 (533)
|.|++. .+..++..+. . ...++|+++||||+| +|+|||+||+++...+++++. .+.+... ..++++.
T Consensus 239 l~~~~~~~~~~~~~~~~-~-----~~~~vI~~~SfSK~~-~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (423)
T PLN02397 239 FASGDLDADAQSVRMFV-E-----DGHEILVAQSYAKNM-GLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPI 311 (423)
T ss_pred ccCCchhhhhHHHHHHH-h-----cCCcEEEEEECcccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcH
Confidence 998541 1223332321 1 123589999999999 899999999863223565544 3334433 4457788
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----ceEecCCceeEEecccCCCHHHHHHH
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG----ITCNKAEGAMYLFPRIQLPEKAIKAA 464 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~ 464 (533)
+.|.++..+|+++ ...+.|.++++.+++.++++++.+.+.|+++ | |.++.|+||||+|++++
T Consensus 312 ~~q~~~~~~L~~~----~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~--------- 377 (423)
T PLN02397 312 HGASIVATILGDP----ELFSEWTKELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN--------- 377 (423)
T ss_pred HHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC---------
Confidence 9999999988742 1234566668889999999999999999998 6 88889999999997653
Q ss_pred HhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHH
Q 009517 465 EAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 465 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~ 525 (533)
..++.+|++++||++.+ .+ ||+++ .+.++|++++++|+++++
T Consensus 378 --------~~~~~~Ll~~~~V~v~~-------~~----Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 378 --------KEQVDRMTKEYHIYMTR-------DG----RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred --------HHHHHHHHHhCCEEECC-------CC----eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 23678999999999973 22 99997 999999999999999975
No 65
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=8e-46 Score=382.90 Aligned_cols=376 Identities=23% Similarity=0.324 Sum_probs=285.3
Q ss_pred CcccccCccc-cccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 62 NPKVLKCEYA-VRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 62 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
|+.+..++++ ++..+..+..+...+. |..++|+|+.|+|.. +.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~~~~~~----------------------~~------- 47 (402)
T TIGR03542 4 NPHFLKLKSSYLFSEINRRVNEFRKKH-------PSADIIRLGIGDTTQ----------------------PL------- 47 (402)
T ss_pred CCCccccCcchHHHHHHHHHHHHHhcc-------CCCCeEEcCCCCCCC----------------------CC-------
Confidence 4566666654 4444555555554321 123499999999874 22
Q ss_pred CHHHHHHHHHHHhcCCC-CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
|+.+.+++.+.+.+... .....|.|..|.++||+++|+++.+. + +++++|++|+|+++++..++ .++ .+||+|+
T Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~--~~~d~I~it~Ga~~al~~l~-~l~-~~gd~Vl 122 (402)
T TIGR03542 48 PASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-R--IDPEEIFISDGAKCDVFRLQ-SLF-GSDNTVA 122 (402)
T ss_pred CHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-C--CCHHHEEECCCcHHHHHHHH-Hhc-CCCCEEE
Confidence 67778887777765311 02356999999999999999986432 2 78899999999999999865 455 6899999
Q ss_pred EcCCcCcchHHHHHHhCC-----------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 220 CPIPQYPLYSASIALHGG-----------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~-----------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
+++|+|..|..+++..|+ +++.++++++++|.+|++.. . ++++|++++||||||.++|
T Consensus 123 v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~------~~~~i~l~nP~NPTG~~~s 191 (402)
T TIGR03542 123 VQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----P------KIDIIYLCSPNNPTGTVLT 191 (402)
T ss_pred EeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----C------CceEEEEeCCCCCCCccCC
Confidence 999999999999999999 99999987666676664321 2 6899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
.+++++|+++|++||++||+||+|.+|.+++. ...++..+ . ....++|+++||||.| |+||+|+||+++
T Consensus 192 ~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~-~-----~~~~~vi~~~SfSK~~-g~pGlRiG~~i~--- 260 (402)
T TIGR03542 192 KEQLKELVDYANEHGSLILFDAAYSAFISDPS-LPHSIFEI-P-----GAKECAIEFRSFSKTA-GFTGVRLGWTVV--- 260 (402)
T ss_pred HHHHHHHHHHHHHcCeEEEEEchhhhhccCCC-CCcchhhC-C-----CCcccEEEEecCcccc-CCCCcceEEEEe---
Confidence 99999999999999999999999999887542 22233222 1 1123689999999999 899999999998
Q ss_pred CHHHH--------HHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 369 SAEVR--------EQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 369 ~~~~~--------~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
+++++ ..+.... ....+++.+.|.++..++.+.. + .+..+.++.++++++.+.+.|++. |+
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~--------~-~~~~~~~~~~~~~~~~~~~~L~~~-~~ 330 (402)
T TIGR03542 261 PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEG--------L-QPILEAISYYMENARILRKALEAA-GF 330 (402)
T ss_pred cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcc--------h-hHHHHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 88776 2222222 2334678899999888886432 1 234556678999999999999987 88
Q ss_pred eEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHH
Q 009517 440 TCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTR 519 (533)
Q Consensus 440 ~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~ 519 (533)
.+..|.+|+|+|++++.. .++..++..+++++||.+.||+.|+ ..+.++|||+++.+++++++++++
T Consensus 331 ~~~~~~~~~f~~v~l~~~------------~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~~~~~~l~~~l~~ 397 (402)
T TIGR03542 331 KVYGGEHAPYLWVKTPEG------------ISSWDFFDFLLYQYHVVGTPGSGFG-PSGEGFVRFSAFGKRENIVEACER 397 (402)
T ss_pred eecCCCceeEEEEECCCC------------CCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEecCCHHHHHHHHHH
Confidence 888889999999776421 1245566777878899999999997 344569999987788899999999
Q ss_pred HHHH
Q 009517 520 LTDF 523 (533)
Q Consensus 520 l~~~ 523 (533)
|+++
T Consensus 398 l~~~ 401 (402)
T TIGR03542 398 IKEA 401 (402)
T ss_pred HHhh
Confidence 9875
No 66
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.5e-45 Score=376.36 Aligned_cols=332 Identities=23% Similarity=0.352 Sum_probs=267.4
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|+|.. +. ++.+.+++.+... ...|++..|.++||+++|+
T Consensus 29 ~i~l~~~~p~~----------------------~~-------~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~ 73 (364)
T PRK07865 29 IVDLSVGTPVD----------------------PV-------PPVIQEALAAAAD------APGYPTTAGTPELREAIVG 73 (364)
T ss_pred EEEcCCCCCCC----------------------CC-------CHHHHHHHHHHHh------hCCCCCccCCHHHHHHHHH
Confidence 89999999863 11 4555666554332 2479999999999999999
Q ss_pred HHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHH
Q 009517 179 GIEARDGFP-ADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (533)
Q Consensus 179 ~~~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~ 256 (533)
++.+++|++ +++++|++|+|+++++..++..+ + ++||+|++++|+|+.|...++..|++++.++ ++++
T Consensus 74 ~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~~~ 143 (364)
T PRK07865 74 WLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGL-GPGDVVVIPELAYPTYEVGARLAGATVVRAD---------SLTE 143 (364)
T ss_pred HHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCcccHHHHHHhcCCEEEecC---------Chhh
Confidence 999988987 89999999999999999988887 6 7999999999999999999999999988874 2233
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
++. . ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..+. +..++.+
T Consensus 144 l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~--~~~~~~~- 209 (364)
T PRK07865 144 LGP---Q------RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSI--LDPRVCG- 209 (364)
T ss_pred CCc---c------cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCcc--ccccccC-
Confidence 322 2 689999999999999999999999999999999999999999999888542 1221 1111100
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 415 (533)
....++|+++||||.+ |+||+|+||+++ ++++++.+..... ..++.+.+.|.++..+|.+. +++
T Consensus 210 ~~~~~~i~~~S~SK~~-~~~GlRiG~i~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-----------~~~ 274 (364)
T PRK07865 210 GDHTGLLAVHSLSKQS-NLAGYRAGFVAG---DPALVAELLEVRKHAGMMVPAPVQAAMVAALGDD-----------AHV 274 (364)
T ss_pred CccceEEEEeechhcc-CCCceeeEEEec---CHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCH-----------HHH
Confidence 1224689999999999 789999999987 9999999887654 55778999999999888631 345
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 416 DGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 416 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
+++++.++++++.+.+.|++. |+.+..|+||+|+|+++.. +...++ +.|+++||.+.||..|+.
T Consensus 275 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~l~~~gv~v~pg~~f~~ 338 (364)
T PRK07865 275 REQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATRGE--------------DCWDTV-AWLAERGILVAPGDFYGP 338 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeCCC--------------CHHHHH-HHHHHCCEEEeCccccCc
Confidence 667888999999999999987 8888899999999976531 122333 556789999999998873
Q ss_pred CCCCceEEEEecCCcCcHHHHHHHHH
Q 009517 496 VPGTWHFRCTILPQEDKIPAIVTRLT 521 (533)
Q Consensus 496 ~~g~~~iRis~~~~~e~i~~~~~~l~ 521 (533)
.+.++|||+++.+++++++++++|+
T Consensus 339 -~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 339 -AGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred -CCCCEEEEEecCCHHHHHHHHHHhh
Confidence 4456999999877889999998885
No 67
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.2e-45 Score=372.61 Aligned_cols=352 Identities=23% Similarity=0.332 Sum_probs=280.6
Q ss_pred ccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHH
Q 009517 69 EYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERA 148 (533)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~ 148 (533)
++.++..++..+.+.+..+++ +++|+.|+|.. +. ++.+.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~p~~----------------------~~-------~~~~~~~~ 43 (357)
T TIGR03539 2 PDFPWDSLAPYKAKAASHPDG---------IVDLSVGTPVD----------------------PV-------PPLIRAAL 43 (357)
T ss_pred CcchHHHHHHHHHHhhhCCCC---------eEEccCCCCCC----------------------CC-------CHHHHHHH
Confidence 456777788888888765555 99999999864 21 45566665
Q ss_pred HHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEEEcCCcCc
Q 009517 149 WQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYP 226 (533)
Q Consensus 149 ~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv~~p~~~ 226 (533)
.+... ...|++..|.++||+++++++.+++|++ +++++|++|+|+++++..++..+ . ++||.|++++|+|+
T Consensus 44 ~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~ 116 (357)
T TIGR03539 44 AAAAD------APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL-GPGDTVVIPELAYP 116 (357)
T ss_pred HHHHh------hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCcH
Confidence 54332 3579999999999999999999988987 99999999999999999998887 6 79999999999999
Q ss_pred chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 009517 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (533)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~l 306 (533)
.|...++..|++++.++ |++.+.. . ++++|++++|+||||.++|.+++++|+++|++||++|
T Consensus 117 ~~~~~~~~~g~~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i 178 (357)
T TIGR03539 117 TYEVGALLAGATPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVV 178 (357)
T ss_pred HHHHHHHhcCCEEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEE
Confidence 99999999999988763 2333221 1 6899999999999999999999999999999999999
Q ss_pred EEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-cccc
Q 009517 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLC 385 (533)
Q Consensus 307 I~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~ 385 (533)
|+||+|.++.|++. + .+ .+.....+ ....++|+++||||.+ |++|+|+||+++ ++++++.+.+... ..++
T Consensus 179 i~De~y~~~~~~~~-~-~~--~~~~~~~~-~~~~~vi~~~S~SK~~-~~~G~R~G~~i~---~~~~~~~~~~~~~~~~~~ 249 (357)
T TIGR03539 179 ASDECYLELGWEGR-P-VS--ILDPRVCG-GDHTGLLAVHSLSKRS-NLAGYRAGFVAG---DPALVAELLTVRKHAGLM 249 (357)
T ss_pred EEecchhhhccCCC-C-cc--ceecccCC-CccccEEEEecccccc-CCCceeEEEEec---CHHHHHHHHHHHhhcccC
Confidence 99999999888542 2 11 11111000 0123589999999998 889999999997 8999998887765 5678
Q ss_pred CChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHH
Q 009517 386 SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAE 465 (533)
Q Consensus 386 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~ 465 (533)
++.++|.++..+|.+. .+.+.+++.++++++.+.+.|++. |+.+..|+||+|+|++++.
T Consensus 250 ~~~~~q~~~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~~~~~~~--------- 308 (357)
T TIGR03539 250 VPAPVQAAMVAALGDD-----------GHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLWATRGE--------- 308 (357)
T ss_pred CCHHHHHHHHHHcCCH-----------HHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEEEEECCC---------
Confidence 8999999999888631 334667888999999999999987 8888899999999976531
Q ss_pred hcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHH
Q 009517 466 AEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520 (533)
Q Consensus 466 ~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l 520 (533)
+...+. +.|+++||.+.||..|+ ..+.++|||+++.++++|++++++|
T Consensus 309 -----~~~~~~-~~l~~~gV~v~pg~~f~-~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 309 -----DAWDTV-DRLAELGILVAPGDFYG-PAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred -----CHHHHH-HHHHhCCEEECCccccC-CCCCCeEEEEecCCHHHHHHHHHhh
Confidence 123333 45678899999999887 3455699999997788899998876
No 68
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=4.7e-46 Score=380.44 Aligned_cols=357 Identities=27% Similarity=0.464 Sum_probs=294.4
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHH-HHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~-~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
+|||+.|++....+.|. ++++++++.+ ..... ....|++..|.++||+++|
T Consensus 3 ~I~l~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia 54 (363)
T PF00155_consen 3 VINLGSNAPLLLSQNPP-------------------------PPAAIKAAIRGAATSS---SFLGYPPPQGYPELREAIA 54 (363)
T ss_dssp EEESSSSSTSSTTSSHH-------------------------HHHHHHHHHHHHHHHT---GCTSSTCTTHHHHHHHHHH
T ss_pred EEEEECCCCCCcccccc-------------------------hHHHHHHHHHHhhccc---ccccCCCchhhHHHHHHHH
Confidence 89999999986333221 4667777665 22221 4789999999999999999
Q ss_pred HHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHh-ccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHH
Q 009517 178 AGIEARDGFPADPN-DIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (533)
Q Consensus 178 ~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~ 255 (533)
+++++.+|.+.+++ +|++++|+++++..++..+ . ++||+|++++|+|+.|...++..|.+++.++++.+++|++|++
T Consensus 55 ~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~-~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 133 (363)
T PF00155_consen 55 DFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI-NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPE 133 (363)
T ss_dssp HHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS-STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHH
T ss_pred HHhhhccCcccccceEEEEecccccchhhhhhcccc-cccccceecCCccccccccccccCceeeecccccccccccccc
Confidence 99998889999999 9999999999999999998 6 7899999999999999999999999999999887788999999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCC
Q 009517 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (533)
Q Consensus 256 ~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 335 (533)
.|++.+++...++.++++|++++||||||.+++.+++++|+++|++||++||+||+|.++.++.. .+.+. ...+
T Consensus 134 ~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~---~~~~-- 207 (363)
T PF00155_consen 134 ALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP-DFGPI---RSLL-- 207 (363)
T ss_dssp HHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS-HTHHH---HGHH--
T ss_pred ccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCC-ccCcc---cccc--
Confidence 99999988544433578999999999999999999999999999999999999999999888643 22221 1222
Q ss_pred CCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHH
Q 009517 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (533)
Q Consensus 336 ~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 415 (533)
+.+.++|++.||||+| |++|+|+||+++ ++++++.+......... +.+.|.++..++.+. ..+.+++
T Consensus 208 -~~~~~vi~~~S~SK~~-g~~GlRvG~i~~---~~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~-------~~~~~~~ 274 (363)
T PF00155_consen 208 -DEDDNVIVVGSLSKSF-GLPGLRVGYIVA---PPELIERLRRFQRSGLS-SSPMQAAAAAALSDP-------ELVEKWL 274 (363)
T ss_dssp -TTTSTEEEEEESTTTT-TSGGGTEEEEEE---EHHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHH-------HHHHHHH
T ss_pred -cccccceeeeeccccc-cccccccccccc---hhhhhhhhhhccccccc-cchhhHHHHHhhhcc-------ccccccc
Confidence 2333489999999999 899999999998 99999999887754333 888888888877531 1233477
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 416 DGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 416 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
++++++++++++.+.+.|++. |+.+..+++|+|+|+.++.. ++..++++++++.||.+.||..|+.
T Consensus 275 ~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~L~~~~gi~v~pg~~~~~ 340 (363)
T PF00155_consen 275 EELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDPN-------------DAEELAQELLEEYGILVRPGSYFGV 340 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESHH-------------HHHHHHHHHHHHHTEEEEEGGGGTS
T ss_pred ccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcccc-------------hHHHHHHHHHHhCCEEEEecCCCCC
Confidence 889999999999999999998 99999999999999765511 2456677888777999999999986
Q ss_pred CCCCceEEEEe-cCCcCcHHHHHHHH
Q 009517 496 VPGTWHFRCTI-LPQEDKIPAIVTRL 520 (533)
Q Consensus 496 ~~g~~~iRis~-~~~~e~i~~~~~~l 520 (533)
.++|||++ ..+++++++++++|
T Consensus 341 ---~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 341 ---PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp ---TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred ---CCEEEEEeccCCHHHHHHHHhhC
Confidence 34999999 58999999999886
No 69
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-44 Score=371.46 Aligned_cols=344 Identities=24% Similarity=0.401 Sum_probs=281.1
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|+|+. +. |+.+.+++.+.+..... ....|.+..|.+++|+++++
T Consensus 35 ~~~l~~g~p~~----------------------~~-------~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~lr~~ia~ 84 (394)
T PRK06836 35 VFDFSLGNPSV----------------------PP-------PAAVKEALRELAEEEDP-GLHGYMPNAGYPEVREAIAE 84 (394)
T ss_pred eEEecCcCCCC----------------------CC-------CHHHHHHHHHHHhcCCc-CcccCCCCCCCHHHHHHHHH
Confidence 89999999864 11 56777777666654222 25779999999999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++++.++..+++++|++|+|+++++..+++.++ ++||+|++++|+|..|..+++..|++++.++++++ +|++|+++++
T Consensus 85 ~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~ 162 (394)
T PRK06836 85 SLNRRFGTPLTADHIVMTCGAAGALNVALKAIL-NPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALE 162 (394)
T ss_pred HHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHH
Confidence 999988888899999999999999999999998 89999999999999999999999999999999764 5899999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH------cCCEEEEccccccccccCCCCcccHHHHHhh
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK------EGLVLLADEVYQENVYVPEKKFHSFKKVSRS 332 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~------~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~ 332 (533)
+++++ ++++|++++||||||.++|.+++++|+++|++ ||++||+||+|.++.|++. +..++.. .
T Consensus 163 ~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~---~ 232 (394)
T PRK06836 163 AAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA-EVPYIFK---Y 232 (394)
T ss_pred hhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC-CCCChHH---c
Confidence 99976 79999999999999999999999999999999 8999999999999988653 2233222 1
Q ss_pred cCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH---HHH---hhh--ccccCChHHHHHHHHHcCCCCCC
Q 009517 333 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ---IYK---VAS--VNLCSNISGQILASLVMSPPKVG 404 (533)
Q Consensus 333 ~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~---l~~---~~~--~~~~~~~~~q~a~~~~L~~~~~~ 404 (533)
..++|+++||||.| |+||+|+||+++ ++++.+. +.. ... ...+++.+.|.++..++.+.
T Consensus 233 ------~~~~i~~~S~SK~~-~~pGlRiG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--- 299 (394)
T PRK06836 233 ------YDNSIVVYSFSKSL-SLPGERIGYIAV---NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT--- 299 (394)
T ss_pred ------cCcEEEEecchhhc-cCcceeeEEEec---CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh---
Confidence 12589999999999 889999999998 6665332 111 122 12467888999998888631
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccc
Q 009517 405 DESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATG 484 (533)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 484 (533)
..++.++++++.+.+.|+++ |+.+..|+||||+|+.++.. +...++ ..|+++|
T Consensus 300 ------------~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~-------------~~~~~~-~~l~~~g 352 (394)
T PRK06836 300 ------------VDVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLFPKSPEE-------------DDVAFC-EKAKKHN 352 (394)
T ss_pred ------------HHHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEEEeCCCC-------------CHHHHH-HHHHhCC
Confidence 12456788899999999998 89999999999999765421 234444 5567789
Q ss_pred eEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 485 IVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 485 V~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
|.+.||..|+. . ++|||+++.+++++++++++|+++++++
T Consensus 353 v~v~~g~~f~~-~--~~iRi~~~~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 353 LLLVPGSGFGC-P--GYFRLSYCVDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred EEEECchhcCC-C--CeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 99999999973 3 3999999988899999999999998765
No 70
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.1e-44 Score=376.67 Aligned_cols=327 Identities=20% Similarity=0.283 Sum_probs=253.6
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-----CCCeEEE-cCCcCcchHHHHH
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----ENDGILC-PIPQYPLYSASIA 233 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----~gd~Vlv-~~p~~~~~~~~~~ 233 (533)
...|++..|.++||++||+++.+++|+.+++++|++|+|+++++.+++++++ + +||.|++ ++|+|+.|...+.
T Consensus 67 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~-~~~~~~~gd~v~i~~~P~y~~y~~~~~ 145 (416)
T PRK09440 67 LGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFA-GRRADGSLKKILFPLAPEYIGYADAGL 145 (416)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHh-ccccCCCCCeEEEecCCCchhhHHHhh
Confidence 4679999999999999999999989999999999999999999999999997 4 5899999 6999999988665
Q ss_pred HhCC----eEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 234 LHGG----TLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 234 ~~g~----~~~~v~~~~~~-~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
..+. .+..+++..++ +|++|++.|+ +.. +++++++++||||||.++|.+++++|+++|++||++||+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~ 217 (416)
T PRK09440 146 EEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLI 217 (416)
T ss_pred ccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEE
Confidence 4442 22233333221 4789999987 332 689999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCC
Q 009517 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSN 387 (533)
Q Consensus 309 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~ 387 (533)
||+|..+.. . ..+...... .+.++|+++|||| + ++||+|+||+++ ++++++.+..... ...+++
T Consensus 218 De~Y~~~~~--~---~~~~~~~~~-----~~~~vI~~~SfSK-~-~~pGlRiG~~i~---~~~l~~~~~~~~~~~~~~~s 282 (416)
T PRK09440 218 DNAYGPPFP--G---IIFSEATPL-----WNPNIILCMSLSK-L-GLPGVRCGIVIA---DEEIIEALSNMNGIISLAPG 282 (416)
T ss_pred eCCccccCC--C---cchhhcCcc-----ccCCeEEEecccc-c-CCCcceEEEEeC---CHHHHHHHHHHHHHhccCCC
Confidence 999975321 1 011111111 1346899999999 5 689999999998 9999999988765 456789
Q ss_pred hHHHHHHHHHcCCCCCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhcC-C--CceEecCCceeEEecccCCCHHHHHH
Q 009517 388 ISGQILASLVMSPPKVGDESYESYCAERDG-ILSSLARRAKTLEDAFNSL-E--GITCNKAEGAMYLFPRIQLPEKAIKA 463 (533)
Q Consensus 388 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~gg~~~~~~~~~~~~~~~~ 463 (533)
.+.|.++..+|+++. +.++..+ +++.|+++++.+++.|.+. + ++.++.|+||+|+|++++.-
T Consensus 283 ~~~q~~~~~~l~~~~--------~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~------ 348 (416)
T PRK09440 283 RLGPAIAAEMIESGD--------LLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDL------ 348 (416)
T ss_pred cHHHHHHHHHhccch--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCC------
Confidence 999999999997543 3333333 5777888888888888763 3 45677899999999776520
Q ss_pred HHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC------CCceEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 464 AEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP------GTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 464 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~------g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+. ++..++. .++++||.++||+.|+... +.++|||+++.+++++++++++|++++++..++
T Consensus 349 ----~~-~~~~~~~-~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 349 ----PI-TTEELYQ-RLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred ----CC-CHHHHHH-HHHHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 01 2344444 4577899999999995311 135999999877899999999999999876553
No 71
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.1e-44 Score=397.19 Aligned_cols=371 Identities=13% Similarity=0.198 Sum_probs=284.8
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|++|+|++ ++ |+.+++++.+.+... .| ..|.+++|++++
T Consensus 698 ~vI~LsinE~d~----------------------pp-------Pp~V~eAi~eal~~~------~~--s~g~pdlr~aLa 740 (1082)
T PLN02672 698 SLIHMDVDESFL----------------------PV-------PSAVKASIFESFVRQ------NI--SESETDPRPSIL 740 (1082)
T ss_pred CEEEEeCCCCCC----------------------CC-------CHHHHHHHHHHHhhc------CC--CCCChHHHHHHH
Confidence 389999999875 33 788888888777541 12 345778999999
Q ss_pred HHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHH
Q 009517 178 AGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (533)
Q Consensus 178 ~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~ 256 (533)
+++.+++|++.++ ++|++|+|+++++..++++++ ++||+|+++.|+|+.|...++..|++++.+|++++++|.+|++.
T Consensus 741 ~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl-~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~ 819 (1082)
T PLN02672 741 QFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV-QEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKT 819 (1082)
T ss_pred HHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHH
Confidence 9999999988765 589999999999999999998 89999999999999999999999999999999877789999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCC-CCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCC-CcccHHHHHhhcC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPG-NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMG 334 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~-NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~ 334 (533)
|++++++. +.++|++++|| ||||.+++.+++++|+++|++||++||+||+|.++.|++.. ...++......+.
T Consensus 820 Le~al~~~-----~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~ 894 (1082)
T PLN02672 820 LASTLETV-----KKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLK 894 (1082)
T ss_pred HHHHhccC-----CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhc
Confidence 99998652 34589999997 99999999999999999999999999999999999996532 1122222222221
Q ss_pred CCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHc---CCCCCCChhHHHH
Q 009517 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM---SPPKVGDESYESY 411 (533)
Q Consensus 335 ~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L---~~~~~~~~~~~~~ 411 (533)
...+..+||+++||||.+ +++|||+||+++ .++++++.+.+... ..++....|.++..++ .+. . ..|
T Consensus 895 ~~sks~nVIvL~SfSKkf-~lpGLRIGylIa--p~~eLi~~l~~~~~-~s~~~~~~q~Aaaaalall~~~---~---~~~ 964 (1082)
T PLN02672 895 SSNPSFAVALLGGLSTEL-LSGGHEFGFLAL--NDSVLIDAFHSAPG-LSRPHSTLKYTIKKLLGLKNQK---S---SDL 964 (1082)
T ss_pred cccCCceEEEEeCcHHhh-ccHHHHheeEEe--CCHHHHHHHHHhhh-hcCCCcHHHHHHHHHHHHHhcc---C---cHH
Confidence 001234799999999999 899999999998 13558888877543 2233333444444333 210 0 125
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH-H--HHHHH-hcCC-CChHHHHHHHHHccceE
Q 009517 412 CAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK-A--IKAAE-AEKT-VPDAFYCRRLLNATGIV 486 (533)
Q Consensus 412 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~-~--~~~~~-~~~~-~~~~~~~~~ll~~~gV~ 486 (533)
.+++++.++.++++++++.+.|++. |+.+.+|+||||+|++++...+ . .+... ..+. .++..++..++++.||.
T Consensus 965 ~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVa 1043 (1082)
T PLN02672 965 LDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLC 1043 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEE
Confidence 5667888889999999999999998 9999999999999986531000 0 00000 0001 14567788888888999
Q ss_pred EEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 487 LVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 487 v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+.||..|+. ++ ||||+++.+++++++++++|+++++
T Consensus 1044 V~PGs~FG~-~g--~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1044 INSSSWTGI-PG--YCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EecCcccCC-CC--eEEEEecCCHHHHHHHHHHHHHHHH
Confidence 999998873 44 9999999888899999999998765
No 72
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-44 Score=370.16 Aligned_cols=332 Identities=18% Similarity=0.240 Sum_probs=257.6
Q ss_pred CccccCCCcccHHHHHHHHHHHHhhcCC-CC-CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH-Hh
Q 009517 159 ATGAYSHSQGIKGLRDTIAAGIEARDGF-PA-DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LH 235 (533)
Q Consensus 159 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~-~~-~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~-~~ 235 (533)
....|++..|.++||+++++++.+.++. .. +.++|++|+|+++++.+++..++ ++||+|++++|+|+.|...+. ..
T Consensus 36 ~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~ 114 (388)
T PRK08637 36 EIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPDHNWGNYKLTFNTRR 114 (388)
T ss_pred cccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHhc
Confidence 4678999999999999999999865532 11 23689999999999999999998 899999999999999998765 68
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-----cCCEEEEcc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-----EGLVLLADE 310 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~-----~~~~lI~De 310 (533)
|++++.+|+..+ ++++|++++++.++... .+..+++++++||||||.++|.+++++|+++|++ |+++||+||
T Consensus 115 g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~--~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De 191 (388)
T PRK08637 115 GAEIVTYPIFDE-DGGFDTDALKEALQAAY--NKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDD 191 (388)
T ss_pred CCEEEEecccCC-CCcCCHHHHHHHHHhhc--cCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 999999998432 35789999999987210 1145567777999999999999999999999886 899999999
Q ss_pred ccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec---CCHHHHHHHHHh----hh-c
Q 009517 311 VYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG---FSAEVREQIYKV----AS-V 382 (533)
Q Consensus 311 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~---~~~~~~~~l~~~----~~-~ 382 (533)
+|.+|.|++. +..++.....+. +++..+++++||||.+ ++||+|+||+++.. .++++++.+.+. .. .
T Consensus 192 ~Y~~l~~~~~-~~~~~~~~~~~~---~~~vi~i~~~s~SK~~-~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 266 (388)
T PRK08637 192 AYFGLFYEDS-YKESLFAALANL---HSNILAVKLDGATKEE-FVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSN 266 (388)
T ss_pred cchhcccCCc-cchhhHHHhhcc---cccceEEEeccccccC-CCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcc
Confidence 9999998664 333332211121 2233345667999998 78999999998622 247888777542 12 3
Q ss_pred cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEecCCceeEEecccCCCHH
Q 009517 383 NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 383 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
.+++|.++|.++..+|+++. +.+++++.+..++++++.+.+.|++. +++.+.+|+||||+|++++ .
T Consensus 267 ~~~~s~~~q~a~~~~l~~~~--------~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~--~- 335 (388)
T PRK08637 267 ISNGPHPSQSAVLRALNSPE--------FDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK--G- 335 (388)
T ss_pred cCCCCcHHHHHHHHHhCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC--h-
Confidence 45789999999999997532 45566777788999999999988764 3688899999999997664 1
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~ 527 (533)
. ++..++..+++++||.+.+. +.+++||+++ .+++++++++++|+++++++
T Consensus 336 ~----------~~~~l~~~l~~~~gv~~~~~-------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 V----------DAEELRVHLLEKYGIGTIAL-------NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred H----------HHHHHHHHHhhhcceEEEec-------cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 1 24556677777889998742 2338999997 78899999999999998764
No 73
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-44 Score=368.10 Aligned_cols=342 Identities=16% Similarity=0.275 Sum_probs=271.3
Q ss_pred ccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHH
Q 009517 73 RGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQIL 152 (533)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~ 152 (533)
...+...++++...+.+ +|+|++|.+.+ .. |+.+++++.+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~-------~~~~~~~~~~~~ 56 (357)
T PRK14809 15 GRGIEEVARELGLDPDD---------LVKLSSNENPH----------------------GP-------SPAAVEAIREAA 56 (357)
T ss_pred CCCHHHHHHHhCCCccc---------eeEecCCCCCC----------------------CC-------CHHHHHHHHHHH
Confidence 33344555555433334 99999998764 22 677888877766
Q ss_pred hcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH
Q 009517 153 DQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI 232 (533)
Q Consensus 153 ~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~ 232 (533)
.. ...|++ .|..+||+++|++++ +++++|++|+|+++++..++++++ ++||+|++++|+|..|...+
T Consensus 57 ~~-----~~~Y~~-~~~~~lr~~ia~~~~------~~~~~I~it~G~~~al~~~~~~~~-~~gd~V~v~~P~y~~~~~~~ 123 (357)
T PRK14809 57 ER-----VHSYPK-ASHADLTAALADRWD------VSPEQVWLANGGDGALDYLARAML-DPGDTVLVPDPGFAYYGMSA 123 (357)
T ss_pred hh-----hhcCCC-CCHHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChHHHHHHH
Confidence 53 457875 679999999999984 789999999999999999999998 89999999999999999888
Q ss_pred HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccc
Q 009517 233 ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312 (533)
Q Consensus 233 ~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y 312 (533)
...|.+++.++++.+++|.+|++.+++.+ + ++++|++++||||||.++|.+++++|+++|++ +++||+||+|
T Consensus 124 ~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y 195 (357)
T PRK14809 124 RYHHGEVREYPVSKADDFEQTADTVLDAY-D------GERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAY 195 (357)
T ss_pred HHcCCeEEEEecccCcCCCcCHHHHHHhh-c------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechh
Confidence 99999999999976667888888877764 2 57899999999999999999999999999975 7899999999
Q ss_pred ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHH
Q 009517 313 QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQI 392 (533)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~ 392 (533)
.+|.+.+ +..... ....++|+++||||.| |+||+|+||+++ ++++++.+.+.. ..++.+.++|.
T Consensus 196 ~~~~~~~-----~~~~~~------~~~~~vi~~~SfSK~~-~~~GlRiG~~~~---~~~~~~~~~~~~-~~~~~~~~~~~ 259 (357)
T PRK14809 196 GEFAERP-----SAVALV------EERDDVAVLRTFSKAY-GLAGLRLGYAVV---PEEWADAYARVN-TPFAASELACR 259 (357)
T ss_pred hhccCCc-----hhHHHH------hhCCCEEEEecchhHh-cCcchhheeeec---CHHHHHHHHHhC-CCCCCCHHHHH
Confidence 9987632 111111 1234689999999999 899999999998 999999888765 35778899999
Q ss_pred HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCCh
Q 009517 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPD 472 (533)
Q Consensus 393 a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (533)
++..+|.+ .++++++++.++++++.+.+.|+.. + .+.+|+|+|+++. ++
T Consensus 260 ~a~~~l~~-----------~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~~---------------~~ 308 (357)
T PRK14809 260 AGLAALDD-----------DEHVERTVETARWAREYIREELDAP-T----WESAGNFVLAEVG---------------DA 308 (357)
T ss_pred HHHHHhCC-----------HHHHHHHHHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEECC---------------CH
Confidence 98888853 1345667788888999999998654 2 2567889997653 13
Q ss_pred HHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 473 AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 473 ~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
..++.. |+++||.+.||..|+. + ++|||+++. .+++++++++|+++++
T Consensus 309 ~~~~~~-l~~~gv~v~~g~~f~~-~--~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 309 SAVAEA-AQERGVIVRDCTSFGL-P--ECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHH-HHHCCEEEEECccCCC-C--CeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 444444 6778999999999973 3 399999874 5789999999998764
No 74
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.5e-44 Score=365.19 Aligned_cols=320 Identities=18% Similarity=0.285 Sum_probs=258.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+.. ...|++. +..+||+++|++++ +++++|++|+|+++++..+++.+ .+ +.|++
T Consensus 34 p~~~~~a~~~~~~~-----~~~Y~~~-~~~~lr~~ia~~~~------~~~~~i~it~Ga~~~l~~~~~~~--~~-~~v~i 98 (354)
T PRK06358 34 PESLKQAITENLDK-----LVEYPDP-DYLELRKRIASFEQ------LDLENVILGNGATELIFNIVKVT--KP-KKVLI 98 (354)
T ss_pred CHHHHHHHHHHHHh-----hhcCCCc-cHHHHHHHHHHHhC------CChhhEEECCCHHHHHHHHHHHh--CC-CcEEE
Confidence 67888888877653 4568765 58999999999984 78999999999999999999986 34 58999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+.|...++..|++++.++++.+++|.+| +++++.+.. ++++|++++||||||.+++.+++++|+++|+
T Consensus 99 ~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~ 171 (354)
T PRK06358 99 LAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDKCE 171 (354)
T ss_pred ecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHHHH
Confidence 999999999999999999999999877788999 666666654 6899999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+++++||+||+|.+|.+++. ..+.... + +...++|+++||||.+ |+||+|+||+++ .++.+++.+.+..
T Consensus 172 ~~~~~ii~De~Y~~~~~~~~--~~~~~~~---~---~~~~~vi~~~S~SK~~-gl~G~RiG~lv~--~~~~~~~~~~~~~ 240 (354)
T PRK06358 172 KRNIYLIIDEAFMDFLEENE--TISMINY---L---ENFKNLIIIRAFTKFF-AIPGLRLGYGLT--SNKNLAEKLLQMR 240 (354)
T ss_pred hcCCEEEEeCcccccCCCcc--chhHHHh---c---cCCCCEEEEEechhhc-cCcchhheeeec--CCHHHHHHHHHhC
Confidence 99999999999999988653 2222221 2 2334789999999999 899999999986 2467888887765
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
. .++.+.++|.++..+|++ .++++++++.++++++.+.+.|++++|+.+..|+|+ |+|++++ .
T Consensus 241 ~-~~~~~~~~q~~~~~~l~~-----------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~~--~-- 303 (354)
T PRK06358 241 E-PWSINTFADLAGQTLLDD-----------KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN-FIFFKLE--K-- 303 (354)
T ss_pred C-CCcchHHHHHHHHHHhcc-----------HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-EEEEEcC--c--
Confidence 4 477899999999999853 134567778889999999999999888888888776 7786554 1
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
...++..++ ++||.+.||..|+. .+.++|||+++.+++ .++++++|++++
T Consensus 304 -----------~~~~~~~l~-~~gI~v~~~~~f~~-~~~~~iRls~~~~~~-~~~l~~~l~~~~ 353 (354)
T PRK06358 304 -----------PIDLRKELL-KKGILIRSCSNYRG-LDENYYRVAVKSRED-NKKLLKALEVIL 353 (354)
T ss_pred -----------hHHHHHHHH-HCCeEEEECCCCCC-CCCCEEEEEeCCHHH-HHHHHHHHHHHh
Confidence 234455544 68999999999952 344599999986554 588888887764
No 75
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-44 Score=367.93 Aligned_cols=340 Identities=18% Similarity=0.227 Sum_probs=265.4
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|.|.+ ++ |+.+++++.+.+.... ....|++ .|..+||+++|+
T Consensus 30 ~~~l~~~~~~~----------------------~~-------~~~~~~~~~~~~~~~~--~~~~Y~~-~G~~~Lr~aia~ 77 (374)
T PRK02610 30 LDRLDTNEFPY----------------------DL-------PPDLKQKLAWLYQQGI--ESNRYPD-GGHEALKQAIAE 77 (374)
T ss_pred eeEecCCCCCC----------------------CC-------CHHHHHHHHHHHhhcc--cccCCCC-CchHHHHHHHHH
Confidence 89999999874 33 6888888887766421 1346865 699999999999
Q ss_pred HHHhhc--CCCCCCCCEEEcCChHHHHHHHHHHhccCCCC-eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHH
Q 009517 179 GIEARD--GFPADPNDIFLTDGASPAVHMMMQLLIRSEND-GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (533)
Q Consensus 179 ~~~~~~--g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd-~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~ 255 (533)
++++++ |+.+++++|++|+|+++++..++.+++ .+|| +|++++|+|..|...++..|++++.+++++ ++|++|++
T Consensus 78 ~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~-~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~ 155 (374)
T PRK02610 78 YVNESAAGSSQITPANISVGNGSDELIRSLLIATC-LGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLA 155 (374)
T ss_pred HhCccccccCCCCHHHEEEcCChHHHHHHHHHHHc-CCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHH
Confidence 998876 577889999999999999998888776 6775 899999999999999999999999999864 36899999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCC
Q 009517 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (533)
Q Consensus 256 ~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 335 (533)
+++++++... ..++++|++++||||||.++|.+++++|+++| ++++||+||+|.+|.+. . .+..+
T Consensus 156 ~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~---~--~~~~~------ 220 (374)
T PRK02610 156 AAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT---T--LVGEL------ 220 (374)
T ss_pred HHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc---c--hHHHH------
Confidence 9999987410 12799999999999999999999999999987 48999999999997531 1 11121
Q ss_pred CCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHH
Q 009517 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (533)
Q Consensus 336 ~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 415 (533)
..+.++|+++||||++ |+||+|+||+++ ++++++.+.+.. ..++.+.+.|.++..+|++. + .+.
T Consensus 221 -~~~~~~ivi~SfSK~~-g~~GlRiG~~v~---~~~l~~~l~~~~-~~~~~~~~~q~a~~~~l~~~-------~---~~~ 284 (374)
T PRK02610 221 -AQHPNWVILRTFSKAF-RLAAHRVGYAIG---HPELIAVLEKVR-LPYNLPSFSQLAAQLALEHR-------Q---ELL 284 (374)
T ss_pred -hcCCCEEEEEecchhc-cCcccceeeeec---CHHHHHHHHHhc-CCCCCCHHHHHHHHHHhcCH-------H---HHH
Confidence 1223578899999999 899999999998 999999988765 34677899999999888631 2 233
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 416 DGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 416 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
+.+++.+++ ++.+.+.|++++++.+ .|.+|+|+|++++.. . ++..++ ..|+++||.+.++
T Consensus 285 ~~~~~~~~~-r~~l~~~L~~~~~~~~-~p~~g~f~~~~l~~~-----------~-~~~~~~-~~l~~~gi~v~~~----- 344 (374)
T PRK02610 285 AAIPEILQE-RDRLYQALQELPQLRV-WPSAANFLYLRLSQD-----------A-ALAALH-QALKAQGTLVRHT----- 344 (374)
T ss_pred HHHHHHHHH-HHHHHHHHHhCCCcEe-CCCcceEEEEeCCCC-----------C-CHHHHH-HHHHHCCEEEEeC-----
Confidence 444444444 6678888988877765 588899999765411 1 234444 4467789999863
Q ss_pred CCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 496 VPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 496 ~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
. ++|||+++.+ +++++++++|+++++++
T Consensus 345 -~--~~lRls~~~~-~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 345 -G--GGLRITIGTP-EENQRTLERLQAALTQL 372 (374)
T ss_pred -C--CeEEEeCCCH-HHHHHHHHHHHHHHhhc
Confidence 2 2899999854 56899999999988654
No 76
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-44 Score=344.40 Aligned_cols=377 Identities=19% Similarity=0.242 Sum_probs=308.6
Q ss_pred cccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHH
Q 009517 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (533)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v 144 (533)
+.+++..|.++|+++...++++++ +++|||++|.+.....+++ ....
T Consensus 2 F~~i~~~p~DpIlgL~e~f~~D~R--------~~KVNLgIGvY~de~Gk~p-------------------------vl~a 48 (396)
T COG1448 2 FEKIEAAPADPILGLKEAFKADPR--------PNKVNLGIGVYKDEDGKTP-------------------------VLRA 48 (396)
T ss_pred ccccccCCCCchhHHHHHHhcCCC--------cCeeeeeeeeeeCCCCCcc-------------------------hhHH
Confidence 345677788899999999998544 4699999999887444443 4667
Q ss_pred HHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCC---CCCCCE--EEcCChHHHHHHHHHHhcc-CCCCeE
Q 009517 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDI--FLTDGASPAVHMMMQLLIR-SENDGI 218 (533)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~---~~~~~i--~~t~G~~~al~~~~~~l~~-~~gd~V 218 (533)
++++.+.+..... ...|.|..|.+++++++++++. |.+ +..++| +-|.|||.|+..+...+.. .+..+|
T Consensus 49 V~~Ae~~l~~~~~--~k~Yl~i~G~~~f~~~~~~llF---G~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~v 123 (396)
T COG1448 49 VKKAEKRLLEQEK--TKNYLPIEGLPEFLEAVQKLLF---GADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATV 123 (396)
T ss_pred HHHHHHHhhcccc--ccccCCcCCcHHHHHHHHHHhc---CCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceE
Confidence 8888887776553 7899999999999999999994 543 444555 6688999999998887741 255679
Q ss_pred EEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC--CCCCccCCCHHHHHHHH
Q 009517 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIV 296 (533)
Q Consensus 219 lv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p--~NPtG~~~s~~~l~~i~ 296 (533)
++++|+|++|..++..+|.++..||+.+..+-++|++.+.+.|+.. ..+.|+|.|+ |||||..+|.++|++|+
T Consensus 124 wis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a-----~~~~vvLLH~CcHNPTG~D~t~~qW~~l~ 198 (396)
T COG1448 124 WISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA-----PEGSVVLLHGCCHNPTGIDPTEEQWQELA 198 (396)
T ss_pred EeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC-----CCCCEEEEecCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999888899999999999986 4445555544 99999999999999999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH--
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-- 374 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~-- 374 (533)
++.++++++.++|-+|++|.-+.+.....+..++. ....++++.||||+| ||+|.|+|++.+++.+.+...
T Consensus 199 ~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~------~~~~~lva~S~SKnf-gLYgERVGa~~vva~~~~~a~~v 271 (396)
T COG1448 199 DLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAE------VGPELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRV 271 (396)
T ss_pred HHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHH------hCCcEEEEehhhhhh-hhhhhccceeEEEeCCHHHHHHH
Confidence 99999999999999999965432222223333332 233489999999999 899999999998877766554
Q ss_pred --HHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--CceEecCCcee
Q 009517 375 --QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-E--GITCNKAEGAM 448 (533)
Q Consensus 375 --~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~gg~ 448 (533)
+++.... .+++|+..+..+++.+|++++ +.+.|.+++..|++++.++|..|.+.|++. + .|+++..+-||
T Consensus 272 ~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~----Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GM 347 (396)
T COG1448 272 LSQLKAIIRTNYSNPPAHGAAVVATILNNPE----LRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGM 347 (396)
T ss_pred HHHHHHHHHhccCCCchhhHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCce
Confidence 4444443 789999999999999999865 889999999999999999999999999985 2 38999999999
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~ 523 (533)
|.+.+++ .+.+.++.+++||+++ ..| ||+++ +++.+|+.++++|.++
T Consensus 348 Fsy~Gls-----------------~~QV~rLree~~IY~v-------~sG----Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 348 FSYTGLS-----------------PEQVDRLREEFGIYLV-------ASG----RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred eecCCCC-----------------HHHHHHHHHhccEEEe-------cCC----eeeeccCChhhHHHHHHHHHhh
Confidence 9997765 2336789999999999 455 99997 9999999999999876
No 77
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=337.81 Aligned_cols=347 Identities=21% Similarity=0.365 Sum_probs=293.8
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh-C
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH-G 236 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~-g 236 (533)
...|.+-.|++++|+++|+++.+..| +..+|+++++++|++.|.++++-.+. +|||.-++|.|.|+++..-++.. |
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY~gfdrdl~~rTg 192 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA-DPGDAFLVPTPYYPGFDRDLRWRTG 192 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc-CCCceeeecCCCCCcccccceeccC
Confidence 56688889999999999999997654 45788999999999999999999998 99999999999999998777665 8
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+++++|.++..++|+++++++|+++.++++.+.+++.|+++||+||-|.+++++++..++++|.++|+.+|+||+|.+-+
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASL 396 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~ 396 (533)
|+.. .+.|+.++.....- ...+|-++.|+||-| |+||+|+|.+.. .++.++.+..++.+ ....++..|+.++.
T Consensus 273 F~~~-~F~Sv~ev~~~~~~--~~~rvHivyslSKD~-GlpGfRvGviYS--~ne~VvsaA~kmss-f~~vSs~tQ~~la~ 345 (471)
T KOG0256|consen 273 FDKS-EFRSVLEVRKDPHL--DPDRVHIVYSLSKDF-GLPGFRVGVIYS--NNEDVVSAATKMSS-FGLVSSQTQYLLAS 345 (471)
T ss_pred cCcc-CceEHHHHhhcccc--CCCcEEEEEEecccc-CCCceEEEEEEe--cChHHHHHHHHHhh-ccCCcHHHHHHHHH
Confidence 9764 79999888766521 233678899999999 999999999987 58888888887764 46678999999999
Q ss_pred HcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHH
Q 009517 397 VMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYC 476 (533)
Q Consensus 397 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (533)
+|.+.. | ..+.+++..++++.+..++.+.|+++ |+.+.+.++|+|+|++++. ... ......+.+++
T Consensus 346 LLSD~~-----f--~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~---lL~---s~tfe~El~Lw 411 (471)
T KOG0256|consen 346 LLSDEE-----F--TREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRK---LLT---SLTFEGELELW 411 (471)
T ss_pred HhchHH-----H--HHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHH---hcC---cCChHHHHHHH
Confidence 998632 1 22346778888999999999999999 9999999999999988761 111 11122345667
Q ss_pred HHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 477 RRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 477 ~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.+++.+-++.+.||+.|.. .-.+|||++|+ ..++.++-+++||++++..+.+
T Consensus 412 ~~i~~~vklnlSpG~s~~C-~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~~ 464 (471)
T KOG0256|consen 412 ERILDNVKLNLSPGSSCHC-HEPGWFRVCFANMSEETLEVAMRRLKQFLDSQVQ 464 (471)
T ss_pred HHHHHhhccccCCCCccee-cCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhhc
Confidence 7888777999999999974 33349999998 4455555599999999986654
No 78
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.5e-44 Score=365.95 Aligned_cols=332 Identities=17% Similarity=0.277 Sum_probs=268.4
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.+.+ +. |+.+++++.+.+.. ...|+ ..|..+||+++|+
T Consensus 31 ~i~l~~nen~~----------------------~~-------~~~v~~a~~~~~~~-----~~~Yp-~~g~~~Lr~aia~ 75 (366)
T PRK01533 31 FVKLASNENPF----------------------GC-------SPRVLDELQKSWLD-----HALYP-DGGATTLRQTIAN 75 (366)
T ss_pred eEEeCCCCCCC----------------------CC-------CHHHHHHHHHHHHh-----cCcCC-CCCHHHHHHHHHH
Confidence 89999999774 22 78888888877654 23474 5689999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++ +++++|++|+|+++++..++++++ ++||+|++++|+|+.|...+...|.+++.++++ ++++|+++|+
T Consensus 76 ~~~------~~~~~I~vt~Gs~e~i~~~~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~ 145 (366)
T PRK01533 76 KLH------VKMEQVLCGSGLDEVIQIISRAVL-KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEIS 145 (366)
T ss_pred HhC------CCcceEEECCCHHHHHHHHHHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHH
Confidence 984 779999999999999999999998 899999999999999999999999999999985 3479999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+++++ ++++|++++||||||.+++.+++++|+++|++++ ++|+||+|.+|.+.+. ..+.... + +.
T Consensus 146 ~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~--~~~~~~~---~---~~ 210 (366)
T PRK01533 146 SVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD--FPETLPL---L---EK 210 (366)
T ss_pred HHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc--CcchhHH---h---cc
Confidence 98876 7899999999999999999999999999998876 5677999998876432 1222222 1 23
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 418 (533)
..++|+++||||.| |++|+|+||+++ ++++++.+.+.. ..++.+.++|.++..+|++. ++.+.+
T Consensus 211 ~~~vi~~~SfSK~~-~l~GlRiG~~i~---~~~~~~~l~~~~-~~~~~~~~~q~aa~~~l~~~-----------~~~~~~ 274 (366)
T PRK01533 211 HKNILVLRTFSKAY-GLASFRVGYAVG---HEELIEKLNVVR-LPFNVSSLAQKAATIAFGDD-----------EFIEEI 274 (366)
T ss_pred CCCEEEEeCchHHh-cChHHHHhHHhC---CHHHHHHHHHhc-CCCCcCHHHHHHHHHHhCCH-----------HHHHHH
Confidence 34689999999999 899999999998 899999998765 45889999999999999632 334455
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
++.++++++++.+.|+.+ |+.+.+++|+ |+|+.++ . ...+. ..|.++||.|++ | +
T Consensus 275 ~~~~~~~r~~~~~~l~~~-g~~~~~~~~n-f~~~~~~--~-------------~~~~~-~~l~~~GI~Vr~---~---~- 329 (366)
T PRK01533 275 VRVNTEGLRQYESFCKEN-EIPFYQSQTN-FIFLPVE--N-------------GGEIY-EACAHAGFIIRP---F---P- 329 (366)
T ss_pred HHHHHHHHHHHHHHHHhC-CCccCCCcCc-EEEEeCC--C-------------HHHHH-HHHHHCCcEEcc---C---C-
Confidence 667777888888888887 8888888655 6786543 1 23333 445679999997 4 1
Q ss_pred CceEEEEecCCcCcHHHHHHHHHHHHHHHHHHhcC
Q 009517 499 TWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFRN 533 (533)
Q Consensus 499 ~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~~~~ 533 (533)
+++||+++.. ++.+.++++|+++++..+++.||
T Consensus 330 -~~iRis~~~~-~~~~~l~~al~~~~~~~~~~~~~ 362 (366)
T PRK01533 330 -NGVRITVGTR-EQNEGVISVLQQHFENKKRKSRD 362 (366)
T ss_pred -CceEEeCCCH-HHHHHHHHHHHHHHHhccccccc
Confidence 3899999865 45699999999999888777665
No 79
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.9e-43 Score=358.03 Aligned_cols=347 Identities=19% Similarity=0.252 Sum_probs=267.6
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
+...++++...+.+ +++|++|.+.+ +. |+.+++++.+.+..
T Consensus 8 ~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~-------p~~~~~a~~~~~~~- 48 (356)
T PRK08056 8 IREAATVLGISPDQ---------LLDFSANINPL----------------------GM-------PVSLKRAIIDNLDC- 48 (356)
T ss_pred HHHHHHHhCCChhh---------EEEeccccCCC----------------------CC-------CHHHHHHHHHHHHh-
Confidence 44445555443444 89999998764 22 78888888877764
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH 235 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~ 235 (533)
...|++. +..+||+++|++++ +++++|++|+|+++++..+++.+ .+|+ +++++|+|..|...++..
T Consensus 49 ----~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~it~Ga~~~l~~~~~~l--~~g~-viv~~P~y~~~~~~~~~~ 114 (356)
T PRK08056 49 ----AERYPDV-EYRHLHQALARHHQ------VPASWILAGNGETESIFAVVSGL--KPRR-AMIVTPGFAEYRRALQQV 114 (356)
T ss_pred ----cccCcCc-cHHHHHHHHHHHhC------cChhhEEECCCHHHHHHHHHHHh--CCCC-EEEeCCCcHHHHHHHHHc
Confidence 3368764 58999999999974 67899999999999999999986 4675 788899999999999999
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|++++.++++++++|.+| +++++.+.+ ++++|++++||||||.+++.+++++|+++|++++++||+||+|.+|
T Consensus 115 g~~~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (356)
T PRK08056 115 GCEIRRYSLREADGWQLT-DAILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF 187 (356)
T ss_pred CCeEEEEecccccCCCcc-HHHHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence 999999999876678777 455555543 7899999999999999999999999999999999999999999998
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILAS 395 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~ 395 (533)
.+.+. .+.+ ... ...++|+++||||+| |++|+|+||+++ .++++++.+.+.. ..++++.++|.++.
T Consensus 188 ~~~~~-~~~~---~~~------~~~~~i~~~S~SK~~-~~~G~RiG~~v~--~~~~~~~~l~~~~-~~~~~~~~~~~~a~ 253 (356)
T PRK08056 188 IPDET-GFIP---QLA------DNPHLWVLRSLTKFY-AIPGLRLGYLVN--SDDAAVARMRRQQ-MPWSINAFAALAGE 253 (356)
T ss_pred CCcch-HHHH---Hhc------cCCCEEEEEechhhc-cCcchhheeeec--CCHHHHHHHHHhC-CCCchhHHHHHHHH
Confidence 76442 1111 111 123579999999999 899999999986 2467777776644 34677888999998
Q ss_pred HHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHH
Q 009517 396 LVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFY 475 (533)
Q Consensus 396 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (533)
.++.+. .+.+++++.++++++.+.+.|++++++.+.++ +++|+|++++.+ +..+
T Consensus 254 ~~l~~~-----------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~--------------~~~~ 307 (356)
T PRK08056 254 VILQDR-----------AYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCERP--------------DIDL 307 (356)
T ss_pred HHhCCH-----------HHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCCC--------------hHHH
Confidence 888531 23466788899999999999998888876655 678899765421 2344
Q ss_pred HHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 476 CRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 476 ~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+..++ ++||.+.||..|.. .+.++|||+++.. ++.+.+++.|+++++
T Consensus 308 ~~~l~-~~gI~v~~~~~f~~-~~~~~iRis~~~~-~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 308 QRALL-TQRILIRSCANYPG-LDSRYYRVAIRSA-AENERLLAALRNVLT 354 (356)
T ss_pred HHHHH-HCCeEEEECCCCCC-CCCCEEEEEEcCH-HHHHHHHHHHHHHHc
Confidence 55544 68999999999952 3345999999843 455777777776643
No 80
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-43 Score=358.40 Aligned_cols=337 Identities=17% Similarity=0.218 Sum_probs=269.5
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
.|+|++|.|.+ +. |+.+++++.+.+..... ....|++ .|.++||+++|+
T Consensus 28 ~i~l~~~~~~~----------------------~~-------~~~~~~al~~~l~~~~~-~~~~Y~~-~g~~~lr~aia~ 76 (368)
T PRK03317 28 PVRLNTNENPY----------------------PP-------SPALVADIAEAVAEAAA-GLNRYPD-RDAVALRADLAA 76 (368)
T ss_pred eeEecCCCCCC----------------------CC-------CHHHHHHHHHHHhhhhh-hhccCCC-CchHHHHHHHHH
Confidence 79999999764 22 68888888877654221 2567865 579999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++++++|.++++++|++|+|+++++..++++++ ++||.|+++.|+|..|...++..|.+++.++.+ ++|++|+++++
T Consensus 77 ~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~ 153 (368)
T PRK03317 77 YLTAQTGVGLTVENVWAANGSNEILQQLLQAFG-GPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAV 153 (368)
T ss_pred HhhhhccCCCChhhEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHH
Confidence 999998988999999999999999999999998 899999999999999999999999999888764 36899999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
++++.. ++++|++++||||||.+++.+++++|+++| ++++|+||+|.+|.+.+. .+...+.. .
T Consensus 154 ~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~---~~~~~~~~------~ 216 (368)
T PRK03317 154 AAIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT---PSALTLLP------E 216 (368)
T ss_pred HHHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC---cCHHHHHH------h
Confidence 999753 688999999999999999988888887777 699999999999877542 12223221 1
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 418 (533)
..++|+++||||++ |++|+|+||+++ ++++++.+.... ..++.++++|.++..+|++. ++..+.
T Consensus 217 ~~~~i~~~SfSK~~-g~~GlRiG~~~~---~~~~~~~l~~~~-~~~~~s~~~~~a~~~~l~~~-----------~~~~~~ 280 (368)
T PRK03317 217 YPRLVVSRTMSKAF-AFAGGRLGYLAA---APAVVDALRLVR-LPYHLSAVTQAAARAALRHA-----------DELLAS 280 (368)
T ss_pred CCCEEEEEechhhh-ccchhhhhhhhC---CHHHHHHHHhcC-CCCCCCHHHHHHHHHHhhCH-----------HHHHHH
Confidence 22589999999999 889999999998 999999887655 45788999999998888531 122334
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
+++++++++.+.+.|++. |+.+..++++|++|.++. +...++ +.|.++||.+.++ + .+
T Consensus 281 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~---------------~~~~~~-~~l~~~Gv~v~~~---~-~~- 338 (368)
T PRK03317 281 VAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFA---------------DRHAVW-QGLLDRGVLIRDV---G-IP- 338 (368)
T ss_pred HHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccC---------------CHHHHH-HHHHHCCEEEEeC---C-CC-
Confidence 456788888999999988 898889999999885432 123344 4456789999973 2 22
Q ss_pred CceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 499 ~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+++||+++. .+++++++++|+++++.
T Consensus 339 -~~iRi~~~~-~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 339 -GWLRVTIGT-PEENDAFLAALAEVLAT 364 (368)
T ss_pred -CeEEEecCC-HHHHHHHHHHHHHHHHH
Confidence 399999974 45688899888887754
No 81
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-42 Score=354.80 Aligned_cols=335 Identities=17% Similarity=0.237 Sum_probs=269.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++.+.+++.+.+... ....|++..|..+||+++|++++ +++++|++|+|+++++..+++.++ .+||+|++
T Consensus 43 ~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~------~~~~~v~~~~g~t~al~~~~~~~~-~~gd~vl~ 112 (380)
T PRK06225 43 HEEVREAMIRCIEEG---EYCKYPPPEGFPELRELILKDLG------LDDDEALITAGATESLYLVMRAFL-SPGDNAVT 112 (380)
T ss_pred CHHHHHHHHHHHhcC---CCCCCCCCcchHHHHHHHHHhcC------CCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEE
Confidence 678888888777642 24579999999999999999974 667899999999999999999998 78999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++|+|..+...++..|++++.++++. +++|.+|++.+++.+++ ++++|++++|+||||.++|.+++++|+++|
T Consensus 113 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a 186 (380)
T PRK06225 113 PDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIA 186 (380)
T ss_pred cCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999753 44689999999998876 789999999999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
+++|+++|+||+|.+|..+ . . ... .+ ++ .++|++.||||.+ |++|+|+||+++ ++++++.+...
T Consensus 187 ~~~~~~ii~De~y~~~~~~-~-~--~~~----~~---~~-~~~i~~~s~SK~~-g~~G~RiG~i~~---~~~l~~~~~~~ 250 (380)
T PRK06225 187 RDNDAFLLHDCTYRDFARE-H-T--LAA----EY---AP-EHTVTSYSFSKIF-GMAGLRIGAVVA---TPDLIEVVKSI 250 (380)
T ss_pred HHCCcEEEEehhHHHHhcc-C-C--chh----hc---CC-CCEEEEeechhhc-CCccceeEEEec---CHHHHHHHHHH
Confidence 9999999999999886532 1 1 111 11 22 3578999999999 899999999998 89999988876
Q ss_pred hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCCceeEEecccCCCH
Q 009517 380 ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC-NKAEGAMYLFPRIQLPE 458 (533)
Q Consensus 380 ~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~gg~~~~~~~~~~~ 458 (533)
....++.+.++|.++..+|... .++.+++++.++++++.+.+.|++++|+.+ ..|.+|.|+|+++....
T Consensus 251 ~~~~~~~~~~~~~~a~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 320 (380)
T PRK06225 251 VINDLGTNVIAQEAAIAGLKVK----------DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG 320 (380)
T ss_pred HhcccCCCHHHHHHHHHHHhcc----------hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc
Confidence 5556778899999988887532 133455666777788889999988767543 34556777887654211
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 459 KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
. +...+..++ .++||.+.||..|+...+.+++|++++.+++++++++++|++++++++.
T Consensus 321 ----------~-~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 321 ----------I-DPEDLVEYL-LERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred ----------C-CHHHHHHHH-HHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 1 234444454 4789999999887644456699999998889999999999999987754
No 82
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.2e-42 Score=354.30 Aligned_cols=317 Identities=19% Similarity=0.197 Sum_probs=243.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+.. ...|++.. ..+||+++|++++ +++++|++|+|+++++..+++.+. +||.|++
T Consensus 37 ~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~aia~~~~------v~~~~I~it~G~~~~i~~~~~~l~--~g~~vlv 102 (360)
T PRK07392 37 PESVIAAIQSALSA-----LRHYPDPD-YRELRLALAQHHQ------LPPEWILPGNGAAELLTWAGRELA--QLRAVYL 102 (360)
T ss_pred CHHHHHHHHHHHHH-----hhcCCCcC-HHHHHHHHHHHhC------cChhhEEECCCHHHHHHHHHHHhC--CCCeEEE
Confidence 68888888776654 45698765 6899999999983 788999999999999999999864 6889999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCC---CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGW---GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~---~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
++|+|..|...++.+|.+++.++++.++++ ..+++.+++.. .++++++++|||||||.++++++ |.+
T Consensus 103 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~---l~~ 172 (360)
T PRK07392 103 ITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREA---ILP 172 (360)
T ss_pred ECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHH---HHH
Confidence 999999999999999999999999876554 24566555432 16789999999999999999665 455
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+++++++ +|+||+|.+|.+++. ..++.... ....++|+++||||.| |++|+|+||+++ ++++++.+.
T Consensus 173 l~~~~~~-~IiDE~y~~~~~~~~--~~s~~~~~------~~~~~vi~i~S~SK~~-~l~GlRiG~~v~---~~~~~~~~~ 239 (360)
T PRK07392 173 LLEQFAL-VVVDEAFMDFLPPDA--EQSLIPCL------AEYPNLIILRSLTKFY-SLPGLRLGYAIA---HPDRLQRWQ 239 (360)
T ss_pred HHHHCCE-EEEECchhhhccCcc--ccchHHHh------hcCCCEEEEEechhhh-cCCchheeeeeC---CHHHHHHHH
Confidence 6677775 666999999887542 23332222 2234689999999999 899999999998 899988887
Q ss_pred HhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCC
Q 009517 378 KVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLP 457 (533)
Q Consensus 378 ~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~ 457 (533)
+.. ..++++.++|.++..+|++. .+.+.+++.++++++.+.+.|++++|+.+. +.+++|+|++++.
T Consensus 240 ~~~-~~~~~s~~~q~~~~~~l~~~-----------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~- 305 (360)
T PRK07392 240 QWR-DPWPVNGLAAAAAIAALADR-----------DFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG- 305 (360)
T ss_pred hhC-CCCCCCHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-
Confidence 654 34778999999999998632 223445567888999999999988888765 4788999976541
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 458 EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
++.+++..+++++||.+.||..|+. .+.++|||+++..++ .+++.+.|+++
T Consensus 306 -------------~~~~l~~~ll~~~gv~v~pg~~f~~-~~~~~iRi~~~~~~~-~~~l~~al~~~ 356 (360)
T PRK07392 306 -------------SALQLQEKLLQQHRILIRDCLSFPE-LGDRYFRVAVRTEAE-NQRLLEALAAI 356 (360)
T ss_pred -------------CHHHHHHHHHhhCCEEEEeCCCCCC-CCCCEEEEEeCCHHH-HHHHHHHHHHH
Confidence 2445566777889999999999973 345699999985432 24444444433
No 83
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-42 Score=355.10 Aligned_cols=312 Identities=16% Similarity=0.268 Sum_probs=244.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+ ... ...|++. +..+||+++|++++ +++++|++|+|+++++..+++.++ ++||+|++
T Consensus 67 ~~~v~~a~~~-~~~-----~~~Yp~~-~~~~lr~~ia~~~~------~~~~~I~~t~Ga~~~i~~~~~~~~-~~gd~Vlv 132 (380)
T PLN03026 67 PPEVLEALGN-MKF-----PYVYPDP-ESRRLRAALAEDSG------LESENILVGCGADELIDLLMRCVL-DPGDKIID 132 (380)
T ss_pred CHHHHHHHHh-hHh-----hccCCCC-CHHHHHHHHHHHhC------cChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEE
Confidence 5667666543 211 3458764 58999999999985 678999999999999999999988 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|..|...++..|++++.++++. +|++|++.++++++.. ++++|++++||||||.+++.+++++|++.+
T Consensus 133 ~~P~y~~y~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~- 204 (380)
T PLN03026 133 CPPTFGMYVFDAAVNGAEVIKVPRTP--DFSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP- 204 (380)
T ss_pred cCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-
Confidence 99999999999999999999999853 5789999999998432 799999999999999999988888887653
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
++||+||+|.+|.+.+. . ..... ...++|+++||||.| |++|+|+||+++ ++++++.+.+..
T Consensus 205 ---~~vi~DeaY~~~~~~~~--~---~~~~~------~~~~viv~~SfSK~~-glaGlRiGy~~~---~~~~i~~l~~~~ 266 (380)
T PLN03026 205 ---ILVVLDEAYIEFSTQES--R---MKWVK------KYDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAK 266 (380)
T ss_pred ---CEEEEECcchhhcCCcc--h---HHHHH------hCCCEEEEecchHhh-cCccccceeeec---CHHHHHHHHHhc
Confidence 89999999999776321 1 12111 223589999999999 899999999998 999999888766
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
. .++.+.++|.++.++|++. ++++++++.++++++.+.+.|++++++. +.|.+++|+|++++..
T Consensus 267 ~-~~~~~~~~q~aa~~aL~~~-----------~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~p~~~~f~~~~~~~~--- 330 (380)
T PLN03026 267 Q-PYNVSVAAEVAACAALSNP-----------KYLEDVKNALVEERERLFGLLKEVPFLE-PYPSDANFILCRVTSG--- 330 (380)
T ss_pred C-CCCCCHHHHHHHHHHhhCH-----------HHHHHHHHHHHHHHHHHHHHHHHCCCCe-ECCCCCeEEEEECCCC---
Confidence 4 4678899999999988631 3356778889999999999999984444 4677888999765411
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
.++..++..++ ++||.+++|..++ +.+++|||++.. ++++.++++|++
T Consensus 331 ---------~~~~~~~~~l~-~~gI~v~~~~~~~---~~~~lRis~~~~-~~~~~l~~al~~ 378 (380)
T PLN03026 331 ---------RDAKKLKEDLA-KMGVMVRHYNSKE---LKGYIRVSVGKP-EHTDALMEALKQ 378 (380)
T ss_pred ---------CCHHHHHHHHH-HCCeEEEECCCCC---CCCEEEEecCCH-HHHHHHHHHHHH
Confidence 12344555554 7899999986643 234999999843 456777777654
No 84
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-43 Score=355.11 Aligned_cols=328 Identities=18% Similarity=0.236 Sum_probs=264.3
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|.|.+ .. |+.+.+++.+.+.. ..|.|..|..+||+++|+
T Consensus 31 ~i~l~~n~~~~----------------------~~-------~~~v~~a~~~~~~~------~~~~p~~g~~~lr~~ia~ 75 (359)
T PRK03158 31 IVKLASNENPY----------------------GP-------SPKVKEAIAAHLDE------LALYPDGYAPELRTKVAK 75 (359)
T ss_pred eEEecCCCCCC----------------------CC-------CHHHHHHHHHHHHH------hhcCCCCcHHHHHHHHHH
Confidence 89999998764 21 57788887776653 245566789999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++ +++++|++|+|+++++..+++.++ ++||+|++++|+|+.|...+...|++++.++++ ++++|++.++
T Consensus 76 ~~~------~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~ 145 (359)
T PRK03158 76 HLG------VDEEQLLFGAGLDEVIQMISRALL-NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAML 145 (359)
T ss_pred HhC------CCHHHEEECCCHHHHHHHHHHHHh-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHH
Confidence 984 678999999999999999999998 799999999999999999999999999999987 3588999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+++ +++++++++||||||.+++.+++.+|++.|+ +|++||+||+|.++.+.+..+ +...... .
T Consensus 146 ~~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~--~~~~~~~------~ 210 (359)
T PRK03158 146 KAIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYP--DTLPLLE------K 210 (359)
T ss_pred HhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccc--cHHHHHH------h
Confidence 88865 7899999999999999999999888888774 699999999999988754322 2212221 2
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 418 (533)
..++|+++||||.| |++|+|+||+++ ++++++.+.+... .++++.++|.++..+|++. ++++++
T Consensus 211 ~~~vi~~~S~SK~~-g~~GlRiG~~v~---~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~-----------~~~~~~ 274 (359)
T PRK03158 211 YENLIVLRTFSKAY-GLAALRVGYGIA---SEELIEKLNIARP-PFNTTRIAQYAAIAALEDQ-----------AFLKEC 274 (359)
T ss_pred cCCEEEEEechHhh-cCcchhhehhcC---CHHHHHHHHHhcC-CCCCCHHHHHHHHHHhcCH-----------HHHHHH
Confidence 23689999999999 899999999998 9999999887654 4788999999999998632 234556
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
++.++++++.+.+.|++. |+.+.++ +|+|+|+++.. ++..++..++ ++||.+.||..|+. +
T Consensus 275 ~~~~~~~~~~~~~~l~~~-~~~~~~~-~g~~i~~~~~~--------------~~~~~~~~l~-~~gv~v~~g~~f~~-~- 335 (359)
T PRK03158 275 VEKNAEGLEQYYAFCKEY-GLFYYPS-QTNFIFVDTGR--------------DANELFEALL-KKGYIVRSGAALGF-P- 335 (359)
T ss_pred HHHHHHHHHHHHHHHHHC-CCeeCCC-cCcEEEEECCC--------------CHHHHHHHHH-HCCeEEeeCCCCCC-C-
Confidence 667888888999999888 8877655 56789976531 2344555554 68999999999973 3
Q ss_pred CceEEEEecCCcCcHHHHHHHHHHH
Q 009517 499 TWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 499 ~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
++|||+++. .+++++++++|+++
T Consensus 336 -~~iRi~~~~-~~~~~~l~~al~~~ 358 (359)
T PRK03158 336 -TGVRITIGL-KEQNDKIIELLKEL 358 (359)
T ss_pred -CeEEEecCC-HHHHHHHHHHHHHh
Confidence 399999984 55679999988875
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-42 Score=352.66 Aligned_cols=327 Identities=18% Similarity=0.257 Sum_probs=263.3
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.+.+ ++ |+.+++++.+.+... ....|++ .|..+||+++|+
T Consensus 28 ~i~l~~~~~~~----------------------~~-------~~~~~~~~~~~~~~~---~~~~Y~~-~~~~~lr~~ia~ 74 (356)
T PRK04870 28 MVKLDAMENPY----------------------RL-------PAELRAELGERLAEV---ALNRYPD-PRAAALKAALRA 74 (356)
T ss_pred ceeCcCCCCCC----------------------CC-------CHHHHHHHHHHhhcc---ccccCCC-CCHHHHHHHHHH
Confidence 99999998764 22 788999988877642 2567887 578999999999
Q ss_pred HHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
+++ ... ++|++|+|+++++..++++++ ++||+|++++|+|..|...++..|++++.+++++ +|++|++.+
T Consensus 75 ~~~------~~~~~~I~~t~G~~~~i~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l 145 (356)
T PRK04870 75 AMG------VPAGADVLLGNGSDELIQLLALACA-KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTLDLPAM 145 (356)
T ss_pred HhC------cCCCCcEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCC--CCCCCHHHH
Confidence 985 333 589999999999999999998 8999999999999999999999999999999874 579999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
+++++.. ++++|++++||||||.+++.+++++|+++| ++++|+||+|..|.+. ...+ .+ .
T Consensus 146 ~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~---~~~~--~~-------~ 205 (356)
T PRK04870 146 LAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGD---SWLP--RL-------A 205 (356)
T ss_pred HHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCc---chHH--HH-------h
Confidence 9999753 789999999999999999999999999998 6889999999986542 1111 11 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
...++|++.|||| + |++|+|+||+++ ++++++.+.... ..++.+.++|.++..++++ .+.+++
T Consensus 206 ~~~~vi~~~S~SK-~-~~~GlRiG~~i~---~~~~i~~~~~~~-~~~~~~~~~q~~a~~~l~~-----------~~~~~~ 268 (356)
T PRK04870 206 RFPNLLVMRTVSK-L-GLAGLRLGYLAG---HPAWIAELDKVR-PPYNVNVLTQATALFALEH-----------VDVLDA 268 (356)
T ss_pred hCCCEEEEecchh-h-hhHHHhhhhhhC---CHHHHHHHHHcc-CCCcCCHHHHHHHHHHHhC-----------HHHHHH
Confidence 2235899999999 7 889999999998 899999887765 3467888999888888752 133566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
.+++++++++.+.+.|++++|+.+. +.+++|+|++++ . ...++ ..|+++||.++||..|+ ..
T Consensus 269 ~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~--~-------------~~~~~-~~l~~~gI~v~~~~~f~-~~ 330 (356)
T PRK04870 269 QAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP--D-------------AAAVF-DGLKTRGVLVKNLSGMH-PL 330 (356)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--C-------------HHHHH-HHHHHCCEEEEECCCCC-CC
Confidence 7778889999999999998888654 556678886654 1 23333 56778999999999996 33
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
+.++|||+++. .+++++++++|+++
T Consensus 331 ~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 331 LANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred CCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 45699999984 45568888888765
No 86
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=348.52 Aligned_cols=318 Identities=20% Similarity=0.288 Sum_probs=250.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+.... ...|++..|. +||+++|++++ +++++|++|+|+++++..+++.++ ++||+|++
T Consensus 51 ~~~~~~al~~~~~~-----~~~Y~~~~g~-~lr~~ia~~~~------~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~vli 117 (371)
T PRK05166 51 SPAVRRAFADIAEL-----LRLYPDPQGR-ALREAIAARTG------VPADRIILGNGSEDLIAVICRAVL-RPGDRVVT 117 (371)
T ss_pred CHHHHHHHHHHHHH-----hhcCCCCcHH-HHHHHHHHHhC------cCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEE
Confidence 56677776654432 5679999984 99999999874 578899999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|+.+...++..|.+++.++++. ++++|++++++++++ ++++|+++|||||||.+++.+++++|+++|+
T Consensus 118 ~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~ 189 (371)
T PRK05166 118 LYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATP 189 (371)
T ss_pred cCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence 99999999999999999999999874 468999999999876 6899999999999999999999999999987
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+ +++||+||+|.+|.+++. ..+......+ .+.++|+++||||.| |++|+|+||+++ .++++++.+.+..
T Consensus 190 ~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~-----~~~~vi~i~SfSK~~-~l~GlRiG~~i~--~~~~l~~~~~~~~ 258 (371)
T PRK05166 190 P-ETLIVVDEAYAEYAAGDD--YPSALTLLKA-----RGLPWIVLRTFSKAY-GLAGLRVGYGLV--SDPELVGLLDRVR 258 (371)
T ss_pred C-CcEEEEECcHHHhcCCcC--cccHHHHHhh-----cCCCEEEEeechHhh-hcchhheeeeec--CCHHHHHHHHHhc
Confidence 4 889999999999886432 3343333222 223589999999999 899999999775 2788888887655
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
..++++.++|.++..+|.+ .+++++.++.++++++.+.+.|++. |+.+ .|.+|+|+|++++.
T Consensus 259 -~~~~~~~~~q~~~~~~l~~-----------~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~p~~g~fl~~~~~~---- 320 (371)
T PRK05166 259 -TPFNVNGAAQAAALAALDD-----------EEHLAKGVALALAERERLKKELAEM-GYRI-APSRANFLFFDARR---- 320 (371)
T ss_pred -cCCCCCHHHHHHHHHHhcC-----------HHHHHHHHHHHHHHHHHHHHHHHHC-cCee-CCCcCCEEEEeCCC----
Confidence 3467889999888887753 1345667788899999999999998 8875 45667899976541
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
++..++..++ ++||.+.||..++. .++|||+++..+ +.+++.+.|+++
T Consensus 321 ----------~~~~l~~~l~-~~gi~v~p~~~~~~---~~~iRi~~~~~~-~~~~l~~~l~~i 368 (371)
T PRK05166 321 ----------PASAVAEALL-RQGVIVKPWKQPGF---ETFIRVSIGSPE-ENDHFVAALDKV 368 (371)
T ss_pred ----------CHHHHHHHHH-HCCeEEecCCCCCC---CCeEEEEcCCHH-HHHHHHHHHHHH
Confidence 2344555554 57999999987652 349999998533 346666666554
No 87
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=347.71 Aligned_cols=333 Identities=17% Similarity=0.207 Sum_probs=265.7
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+++|+.|++.+ +. |+.+++++.+.+.. ...|++.. ..+||+++|+
T Consensus 34 ~~~l~~~~~~~----------------------~~-------~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~~ia~ 78 (369)
T PRK08153 34 RARIGANESGF----------------------GP-------SPSVIAAMREAAAE-----IWKYGDPE-NHDLRHALAA 78 (369)
T ss_pred eeEecCCCCCC----------------------CC-------CHHHHHHHHHHHHH-----hhcCCCCc-cHHHHHHHHH
Confidence 57999999874 32 68888888776643 45688774 8899999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++ +++++|++|+|+++++..+++.++ ++||.|++++|+|+.+...+...|.+++.+|++.+ ++|+++++
T Consensus 79 ~~~------~~~~~I~it~G~~~~l~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~ 148 (369)
T PRK08153 79 HHG------VAPENIMVGEGIDGLLGLIVRLYV-EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALL 148 (369)
T ss_pred HhC------CCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHH
Confidence 973 678999999999999999999988 89999999999999999999999999999998643 68999998
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+... ++++|++++||||||.++|.+++++|+++|+ ++++||+||+|.++.+++. ..++. . .
T Consensus 149 ~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~--~~~~~---~------~ 211 (369)
T PRK08153 149 DAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA--APPID---T------D 211 (369)
T ss_pred HHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc--chhhh---h------c
Confidence 877543 7899999999999999999999999999887 4899999999999877542 22221 1 1
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 418 (533)
..++|+++||||++ |++|+|+||+++ ++++++.+.+... .++.++++|.++..+|+++ ++++++
T Consensus 212 ~~~~i~~~SfSK~~-g~~GlRiG~~v~---~~~~~~~l~~~~~-~~~~s~~~q~~~~~~l~~~-----------~~~~~~ 275 (369)
T PRK08153 212 DPNVIRMRTFSKAY-GLAGARVGYAIG---APGTIKAFDKVRN-HFGMNRIAQAAALAALKDQ-----------AYLAEV 275 (369)
T ss_pred CCCEEEEecchHhc-cCcchheeeeec---CHHHHHHHHHhhc-CCCCCHHHHHHHHHHhcCH-----------HHHHHH
Confidence 23589999999999 899999999998 9999998887664 4778999999999998632 335667
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEE-cCCCCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLV-PGSGFGQVP 497 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~-pg~~f~~~~ 497 (533)
++.++++++.+.+.|++. |+.+. |.+++|+|++++... .....++++ |.++||.++ ||...
T Consensus 276 ~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~~-----------~~a~~l~~~-l~~~Gi~v~~p~~~~---- 337 (369)
T PRK08153 276 VGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRDG-----------AFARAVLDG-LIARDIFVRMPGVAP---- 337 (369)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCCc-----------ccHHHHHHH-HHHCCeEEeeCCCCC----
Confidence 888889999999999887 77644 678889997653110 112334444 446899995 65422
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+.++|||+++ ++++++.++++|+++++..+
T Consensus 338 ~~~~iRis~~-~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 338 LDRCIRVSCG-PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred CCCeEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 2349999998 56788999999999887544
No 88
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.1e-41 Score=345.35 Aligned_cols=326 Identities=15% Similarity=0.195 Sum_probs=258.1
Q ss_pred cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHH
Q 009517 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (533)
Q Consensus 97 ~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 176 (533)
+++++|+.|.+.. +. |+.+++++.+.+.. ...|++.. ..+||++|
T Consensus 43 ~~~i~l~~~~~~~----------------------~~-------~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~ai 87 (370)
T PRK09105 43 EGAVFLNANECPL----------------------GP-------SPAARDAAARSAAL-----SGRYDLEL-EDDLRTLF 87 (370)
T ss_pred CCcEEecCCCCCC----------------------CC-------CHHHHHHHHHHHHH-----hcCCCCch-HHHHHHHH
Confidence 4589999998764 22 78888888877654 23587765 89999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHH
Q 009517 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (533)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~ 256 (533)
+++++ +++++|++|+|+++++..++..++ ++||+|++++|+|..|...++..|++++.+++++ +|.+|++.
T Consensus 88 a~~~~------v~~e~I~it~Gs~~ai~~~~~~l~-~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~ 158 (370)
T PRK09105 88 AAQEG------LPADHVMAYAGSSEPLNYAVLAFT-SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKA 158 (370)
T ss_pred HHHhC------cChhhEEEcCChHHHHHHHHHHHc-CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHH
Confidence 99864 678999999999999999999998 8999999999999999999999999999999864 57899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
+++. .+ ++++|+++|||||||.+++.+++++|++.+ +++++||+||+|..|.. . .+...+.
T Consensus 159 l~~~-~~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~-~~~~~lIvDEaY~~f~~--~---~s~~~~~------ 219 (370)
T PRK09105 159 MLAA-DP------NAGLIYICNPNNPTGTVTPRADIEWLLANK-PAGSVLLVDEAYIHFSD--A---PSVVDLV------ 219 (370)
T ss_pred HHhc-CC------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhC-CCCcEEEEECchHHhcc--C---cchHHHH------
Confidence 9876 23 688999999999999999999999999875 45899999999987542 2 1322332
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
+.+.++|++.||||+| |++|+|+||+++ ++++++.+... ..+.++...|.++..+|.+ .++++
T Consensus 220 ~~~~~vi~~~SfSK~~-g~~GlRiG~~v~---~~~~i~~l~~~--~~~~~~~~~~~aa~~~L~~-----------~~~~~ 282 (370)
T PRK09105 220 AQRKDLIVLRTFSKLY-GMAGMRLGLAAA---RPDLLAKLARF--GHNPLPVPAAAAGLASLRD-----------PKLVP 282 (370)
T ss_pred hhCCCEEEEecccHhh-cCCccceeeeec---CHHHHHHHHhc--CCCCcCHHHHHHHHHHHhC-----------HHHHH
Confidence 1234689999999999 899999999998 99999888776 3355788888888888853 13456
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
.++++++++++.+.+.|+++ |+.+.+++|+||+ ++++. +...+++.++ ++||.+ |..|+.
T Consensus 283 ~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~~-~~~~~--------------~~~~l~~~L~-~~gI~v--~~~~~~- 342 (370)
T PRK09105 283 QRRAENAAVREDTIAWLKKK-GYKCTPSQANCFM-VDVKR--------------PAKAVADAMA-KQGVFI--GRSWPI- 342 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEEE-EeCCC--------------CHHHHHHHHH-HCCcEE--ecCCCC-
Confidence 67788999999999999998 8888889998875 44431 2344555555 569998 444532
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
..+++||+++. ++++++++++|++++
T Consensus 343 -~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 343 -WPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred -CCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 23499999984 456788888777654
No 89
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-42 Score=320.36 Aligned_cols=384 Identities=17% Similarity=0.192 Sum_probs=316.1
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++-+..++..|.++|++...+++++ +.+..|||++|.++....+|+ .
T Consensus 25 ~s~~s~V~maPpDpILGVTeAfk~D--------~n~~KiNLgvGaYRdd~gKp~-------------------------v 71 (427)
T KOG1411|consen 25 SSWWSHVEMAPPDPILGVTEAFKKD--------PNPKKINLGVGAYRDDNGKPY-------------------------V 71 (427)
T ss_pred cchhhcCCCCCCCCcccHHHHHhcC--------CCcceeeecccceecCCCCee-------------------------e
Confidence 3467788889999999999999873 445699999999999888887 5
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCE-----EEcCChHHHHHHHHHHhccCCCC
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI-----FLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i-----~~t~G~~~al~~~~~~l~~~~gd 216 (533)
.++++++++++.... ...+|.|..|++++.+..++++.+.....+..++| +.++|+......++..+. ++.
T Consensus 72 L~~VrkAE~ql~~~~--ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~--~~~ 147 (427)
T KOG1411|consen 72 LPSVRKAEQQLASLS--LDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFY--PSR 147 (427)
T ss_pred eHHHHHHHHHHhhhc--ccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhc--ccc
Confidence 677888888777633 47899999999999999999996543333444444 455565555555555554 688
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC--CCCCccCCCHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRA 294 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p--~NPtG~~~s~~~l~~ 294 (533)
.|++|+|+|.++.++++.+|..+..|.+....+.++|++.+.+.+.+. ....++|++. |||||+.++.++|++
T Consensus 148 ~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~-----p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 148 DIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA-----PEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred ceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC-----CCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 999999999999999999999999999998888999999999999885 5666777754 999999999999999
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH-
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR- 373 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~- 373 (533)
|.++.++++++.|+|.+|++|.-+. .......+...+ ..+.++++++||+|++ ||+|.|+|++.++|.+.+..
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~--~d~DA~avR~F~---~~g~~~~laQSyAKNM-GLYgERvGa~svvc~~ad~A~ 296 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGD--LDKDAQAVRLFV---EDGHEILLAQSYAKNM-GLYGERVGALSVVCKDADEAK 296 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCC--chhhHHHHHHHH---HcCCceEeehhhhhhc-chhhhccceeEEEecCHHHHH
Confidence 9999999999999999999976533 233333333333 3456789999999999 99999999998877666544
Q ss_pred ---HHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceEecCCc
Q 009517 374 ---EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL--EG-ITCNKAEG 446 (533)
Q Consensus 374 ---~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~g 446 (533)
++++.+.. ++++|+..+..++..+|++++ ++..|..+++.|.+++..+|+.|.+.|+.. ++ |.++..+.
T Consensus 297 rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~----l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QI 372 (427)
T KOG1411|consen 297 RVESQLKILIRPMYSNPPLHGARIVATILSDPD----LKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQI 372 (427)
T ss_pred HHHHHHHHHhcccccCCCccchhhhhhccCChH----HHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhh
Confidence 55555555 889999999999999999865 899999999999999999999999999875 33 88899999
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~ 525 (533)
|||+|.+++. +.+..+.+++.|+++ .+| |||++ ++..++.++.++|.++.+
T Consensus 373 GMF~fTgl~p-----------------eQv~~l~ke~~iYmT-------~dG----RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 373 GMFCFTGLNP-----------------EQVDWLTKEYHIYLT-------KDG----RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred heeeecCCCH-----------------HHHHHHHhhheeeec-------cCc----eEeeccccccCCcccchhhHhHhc
Confidence 9999987761 226678899999999 566 99997 899999999999988764
No 90
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-41 Score=335.98 Aligned_cols=326 Identities=21% Similarity=0.330 Sum_probs=267.6
Q ss_pred CcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc
Q 009517 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (533)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 211 (533)
+.++||.++|+.+++++.+.+.. .+.|++.. ..+|+++++++++. .++++|++++|+.+++..++++++
T Consensus 28 ssNenP~gp~~~~~~~~~~~~~~-----~~rYPd~~-~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i~~l~~~~~ 96 (356)
T COG0079 28 SSNENPYGPPPKVIEAIRAALDK-----LNRYPDPD-YRELRAALAEYYGV-----VDPENVLVGNGSDELIELLVRAFV 96 (356)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHh-----hccCCCCc-HHHHHHHHHHHhCC-----CCcceEEEcCChHHHHHHHHHHhh
Confidence 44455666688889888887774 67899984 89999999999863 567899999999999999999999
Q ss_pred cCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 212 RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
.+||+|+++.|+|..|...++.+|++++.++..+ |.+|++.+.+++.+ ++++|++||||||||..++.++
T Consensus 97 -~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i~nPNNPTG~~~~~~~ 166 (356)
T COG0079 97 -EPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFLCNPNNPTGTLLPREE 166 (356)
T ss_pred -cCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhc------CCCEEEEeCCCCCCCCCCCHHH
Confidence 8999999999999999999999999999999875 89999999999987 7999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
++++++.+.+ +.+||+||+|.+|. + .+...++. ...++|++.||||.| ||+|+|+||+++ +++
T Consensus 167 l~~l~~~~~~-~~~vVvDEAY~eF~--~----~~~~~l~~------~~~nlivlRTfSKa~-gLAGlRlGy~ia---~~~ 229 (356)
T COG0079 167 LRALLEALPE-GGLVVIDEAYIEFS--P----ESSLELLK------YPPNLIVLRTFSKAF-GLAGLRVGYAIA---NPE 229 (356)
T ss_pred HHHHHHhCCC-CcEEEEeCchhhcC--C----chhhhhcc------CCCCEEEEEecHHhh-hcchhceeeccC---CHH
Confidence 9999999988 99999999999954 3 12112221 133589999999999 999999999987 999
Q ss_pred HHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCceeEE
Q 009517 372 VREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGAMYL 450 (533)
Q Consensus 372 ~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg~~~ 450 (533)
+++.+.+... .|+.+.+++.++.++|.+ .+++++..+.+++.|+++.+.|+.+ |+. +++++ +.|+
T Consensus 230 ~i~~l~~vr~-p~~v~~~a~~aa~aal~~-----------~~~~~~~~~~~~~~r~rl~~~l~~~-~~~~v~pS~-aNFv 295 (356)
T COG0079 230 LIAALNKVRP-PFNVSSPALAAAIAALRD-----------ADYLEESVERIREERERLYAALKAL-GLFGVFPSQ-ANFV 295 (356)
T ss_pred HHHHHHHhcC-CCCCCHHHHHHHHHHccc-----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCCeecCCC-CcEE
Confidence 9999998874 488999999999999974 2556778888999999999999999 455 45555 6677
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+++++. . .... +.+.|.++||.++..... ....+++||+++..+|+ ++++++|+++++.
T Consensus 296 lv~~~~------------~-~~~~-l~~~L~~~giivR~~~~~--~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 296 LVRVPD------------A-EAAA-LAEALLKKGILVRDCSSV--GLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred EEECCC------------c-cHHH-HHHHHHHCCEEEEeCCCC--CCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 765541 0 1112 335666789999997552 23344999999987776 8999988887654
No 91
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=337.85 Aligned_cols=324 Identities=19% Similarity=0.266 Sum_probs=256.0
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
+++||++|.+.. .+ |+.+++++.+.+.. ...|++..|..+||+++|
T Consensus 23 ~~~~l~~~~~~~----------------------~~-------~~~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~aia 68 (349)
T PRK07908 23 GLLDFAVNVRHD----------------------TP-------PEWLRERLAARLGD-----LAAYPSTEDERRARAAVA 68 (349)
T ss_pred CeEEecCCCCCC----------------------CC-------CHHHHHHHHHHhhH-----hhcCCCccchHHHHHHHH
Confidence 499999998753 22 68888888887764 457999999999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++ +++++|++|+|+++++..+++ + .+| .++++.|+|..+...++..|.+++.++++++ |++|++.+
T Consensus 69 ~~~~------~~~~~I~it~Ga~~al~~~~~-l--~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l 136 (349)
T PRK07908 69 ARHG------RTPDEVLLLAGAAEGFALLAR-L--RPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAV 136 (349)
T ss_pred HHhC------cChhhEEECCCHHHHHHHHHh-c--CCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHh
Confidence 9974 678999999999999999988 4 464 6778899999999999999999999999753 78898854
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++ ++++++++|||||||.++|.+++ .++|+ ++.++|+||+|.++.+ +. ..++.. . +
T Consensus 137 ----~~------~~~~i~l~np~NPTG~~~~~~~l---~~l~~-~~~~iIvDe~y~~~~~-~~--~~~l~~----~---~ 192 (349)
T PRK07908 137 ----PD------DADLVVIGNPTNPTSVLHPAEQL---LALRR-PGRILVVDEAFADAVP-GE--PESLAG----D---D 192 (349)
T ss_pred ----cc------CCCEEEEcCCCCCCCCCcCHHHH---HHHHh-cCCEEEEECcchhhcc-CC--cccccc----c---c
Confidence 23 68899999999999999997655 55565 5788999999998754 32 233222 1 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
.+ ++|+++||||.+ |++|+|+||+++ ++++++.+.+... .++.+++.+.++..++.+. ..+++++
T Consensus 193 ~~-~~i~i~S~SK~~-~l~GlRiG~~~~---~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~---------~~~~~~~ 257 (349)
T PRK07908 193 LP-GVLVLRSLTKTW-SLAGLRVGYALG---APDVLARLTRGRA-HWPVGTLQLEAIAACCAPR---------AVAEAAA 257 (349)
T ss_pred CC-CEEEEeeccccc-CCccceeeeeec---CHHHHHHHHhcCC-CCCccHHHHHHHHHHhccc---------chHHHHH
Confidence 22 589999999998 899999999998 8999998877653 3566777888777776521 2245677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
++++++++++.+.+.|+++ |+.+..|.+|+|+|++++ . .. .+.+.|+++||.+.||..|+. .
T Consensus 258 ~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~--~-------------~~-~~~~~l~~~gI~v~~g~~f~~-~ 319 (349)
T PRK07908 258 DAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP--D-------------AE-LLRKRLRERGIAVRRGDTFPG-L 319 (349)
T ss_pred HHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECC--c-------------HH-HHHHHHHhCCEEEEECCCCCC-C
Confidence 8889999999999999998 899888899999997654 1 12 244667889999999999953 2
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+.++||||++ +++++++++++|++++.
T Consensus 320 ~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 320 DPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 3459999996 45677988888887654
No 92
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-41 Score=342.49 Aligned_cols=325 Identities=20% Similarity=0.261 Sum_probs=256.3
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|.+ +. |+.+.+++.+.+.. ....|++. |..+||+++|+
T Consensus 26 ~i~l~~~~~~~----------------------~~-------~~~~~~a~~~~~~~----~~~~y~~~-~~~~lr~aia~ 71 (353)
T PRK05387 26 LIKLNTNENPY----------------------PP-------SPKVLEAIRAALGD----DLRLYPDP-NADALRQAIAA 71 (353)
T ss_pred eeeccCCCCCC----------------------CC-------CHHHHHHHHHHhhh----hhhcCCCC-cHHHHHHHHHH
Confidence 89999999764 21 57777777776654 24678766 56999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++ +++++|++|+|+++++..+++.++ ++||+|++++|+|+.|...++..|.+++.+++++ +|++|+++++
T Consensus 72 ~~~------~~~~~I~it~G~~~al~~~~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~ 142 (353)
T PRK05387 72 YYG------LDPEQVFVGNGSDEVLAHAFLAFF-NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDD--DFSIDVEDYL 142 (353)
T ss_pred HhC------CCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHH
Confidence 984 778999999999999999999998 8999999999999999999999999999999864 5789999886
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+ ++++|++++||||||.+++.+++++|+++++ ++++|+||+|.+| .+. ... .+.. .
T Consensus 143 ~----------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~~--~~~-~~~---~~~~------~ 198 (353)
T PRK05387 143 R----------PNGGIIFPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVDF--GGE-SAI---PLID------R 198 (353)
T ss_pred h----------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCccccc--CCc-chH---HHHh------h
Confidence 3 3578999999999999999999999988653 8999999999874 332 111 2211 1
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
..++|+++||||.+ |++|+|+||+++ ++++++.+..... ..++.+.++|.++..+|.+. ++.+
T Consensus 199 ~~~~i~~~S~SK~~-~~~GlR~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~-----------~~~~ 263 (353)
T PRK05387 199 YPNLLVVQTFSKSR-SLAGLRVGFAIG---HPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDE-----------AYFE 263 (353)
T ss_pred CCCEEEEEehhHhh-cchhhhceeeec---CHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCH-----------HHHH
Confidence 23589999999999 899999999998 9999999887764 24577899999998888531 2345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
++++++.++++.+.+.|+++ |+.+. |.+++|+|++++ . . +...+++. |.++||.+.+ |+..
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~--~----------~-~~~~~~~~-l~~~gi~v~~---~~~~ 324 (353)
T PRK05387 264 ETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHP--S----------H-DAAELAAK-LRERGIIVRH---FNKP 324 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECC--C----------C-CHHHHHHH-HHHCCEEEEE---CCCC
Confidence 67778889999999999998 88754 567788897654 1 1 23445545 4678999985 3322
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
...++|||+++ +.+++++++++|++++.
T Consensus 325 ~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 325 RIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred CCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 23459999998 45789999999988764
No 93
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.2e-40 Score=340.72 Aligned_cols=319 Identities=20% Similarity=0.280 Sum_probs=255.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+.+.. ...|++.. ..+||+++|++++ +++++|++|+|+++++..++..++ ++||+|++
T Consensus 47 ~~~~~~a~~~~~~~-----~~~y~~~~-~~~lr~~ia~~~~------~~~~~i~~t~G~~~~l~~~~~~l~-~~gd~vl~ 113 (367)
T PRK02731 47 SPKAIEAIRAAADE-----LHRYPDGS-GFELKAALAEKFG------VDPERIILGNGSDEILELLARAYL-GPGDEVIY 113 (367)
T ss_pred CHHHHHHHHHHHHh-----hcCCCCCc-HHHHHHHHHHHhC------cCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEE
Confidence 57778888777654 45788765 4799999999984 668899999999999999999988 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|..|...+...|++++.++.+ ++++|++.+++.+++ ++++|++++||||||.+++.+++++|++.|+
T Consensus 114 ~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 184 (367)
T PRK02731 114 SEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDAMLAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVP 184 (367)
T ss_pred ecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHHHHHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC
Confidence 9999999998889999999999873 568999999999875 7899999999999999999999999988875
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+|+++|+||+|..+.+.+. ...++ ... +...++|+++||||.+ |++|+|+||+++ ++++++.+.+..
T Consensus 185 -~~~~li~De~y~~~~~~~~-~~~~~-~~~------~~~~~~i~~~S~SK~~-g~~G~RiG~l~~---~~~~~~~l~~~~ 251 (367)
T PRK02731 185 -PDVLVVLDEAYAEYVRRKD-YEDGL-ELV------AKFPNVVVTRTFSKAY-GLAGLRVGYGIA---PPEIIDALNRVR 251 (367)
T ss_pred -CCcEEEEECcHHHhccCcC-cccHH-HHH------hhcCCEEEEeeehHhh-cCcccceeeeeC---CHHHHHHHHHcc
Confidence 6999999999999887543 12222 221 1223589999999998 889999999998 899999888765
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
. .++.+.++|.++..+|++ .++++++++.++++++.+.+.|++. |+.+.+ .+|+|+|++++.+
T Consensus 252 ~-~~~~~~~~~~~a~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~g~~~~i~~~~~--- 314 (367)
T PRK02731 252 Q-PFNVNSLALAAAVAALDD-----------DAFVEKSRALNAEGMAWLTEFLAEL-GLEYIP-SVGNFILVDFDDG--- 314 (367)
T ss_pred C-CCCCCHHHHHHHHHHhCC-----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCccCC-CCceEEEEECCCC---
Confidence 3 466788999999998863 1335667788889999999999998 887764 4567889766311
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
.+...++.. |.++||.+.||..|+ .+ ++|||+++ +.++++.++++|+++++
T Consensus 315 ---------~~~~~~~~~-L~~~gI~v~~~~~~~-~~--~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 315 ---------KDAAEAYQA-LLKRGVIVRPVAGYG-LP--NALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred ---------CCHHHHHHH-HHHCCEEEEeCCCCC-CC--CeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 123445544 557899999998886 23 39999997 45678999999988764
No 94
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=339.76 Aligned_cols=306 Identities=20% Similarity=0.284 Sum_probs=243.2
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCe
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
...|++.. ..+||+++|++++ +++++|++|+|+++++..++++++ .+| ++|++++|+|..|...++..|.+
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p~y~~~~~~~~~~g~~ 124 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALYG------CAPEQLLIGRGSDEAIDLLVRALC-VPGRDAVLVTPPVFGMYAVCARLQNAP 124 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHhC------cChHHEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 45688765 6899999999984 678999999999999999999998 788 79999999999999989999999
Q ss_pred EEEEecCC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 009517 239 LVPYYLDE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 239 ~~~v~~~~-~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~ 317 (533)
++.++++. +++|.+|++++++.+... ++++|++++||||||.+++.+++++|+++|+ ++++||+||+|.+|.+
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~ 198 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSD 198 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcC
Confidence 99999853 456788999987665432 7899999999999999999999999999885 4799999999999775
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHH
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLV 397 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~ 397 (533)
.. +...+.. ...++|+++||||+| |+||+|+||+++ ++++++.+.+... .++.+.++|.++..+
T Consensus 199 ~~-----~~~~~~~------~~~~vi~~~SfSK~~-gl~GlRvGy~v~---~~~l~~~l~~~~~-~~~~~~~~~~~a~~~ 262 (364)
T PRK04781 199 VP-----SAVGLLA------RYDNLAVLRTLSKAH-ALAAARIGSLIA---NAELIAVLRRCQA-PYPVPTPCAALAEQA 262 (364)
T ss_pred Cc-----chHHHHh------hCCCEEEEecChhhc-ccccceeeeeeC---CHHHHHHHHhccC-CCCCCHHHHHHHHHH
Confidence 22 1112221 233689999999999 899999999998 9999999987764 467888999998888
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHH
Q 009517 398 MSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCR 477 (533)
Q Consensus 398 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (533)
|.++. + .+..+..+.++++++.+.+.|++++|+..+.|.+|+|+|++++ . ...+ .
T Consensus 263 l~~~~-----~----~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--~-------------~~~~-~ 317 (364)
T PRK04781 263 LSAPA-----L----AVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--D-------------AEAA-F 317 (364)
T ss_pred Hhccc-----H----HHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--C-------------HHHH-H
Confidence 87532 1 2233444567889999999999887776556788899997654 1 2233 3
Q ss_pred HHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 478 RLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 478 ~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
+.|.++||.|+||..|+.. .+++||+++.. ++.+.++++|+++
T Consensus 318 ~~l~~~gI~v~~~~~~~~~--~~~~Ris~~~~-~~~~~l~~al~~~ 360 (364)
T PRK04781 318 QALLAAGVVVRDQRAAPRL--SDALRITLGTP-EQNDRVLAALQRT 360 (364)
T ss_pred HHHHHCCeEEeeCCCCCCC--CCeEEEeCCCH-HHHHHHHHHHHHH
Confidence 5567899999999877522 34999999854 4457777777654
No 95
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-40 Score=334.91 Aligned_cols=314 Identities=20% Similarity=0.335 Sum_probs=243.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+... ....|++.. ..+||+++|++++ +++++|++|+|+++++..+++.++ ++||+|++
T Consensus 37 p~~~~~a~~~~~~~~---~~~~y~~~~-~~~lr~~ia~~~~------~~~~~i~it~G~~~~l~~~~~~l~-~~gd~Vlv 105 (351)
T PRK14807 37 PEEVIKNIQEIVKSS---QVNIYPDPT-AEKLREELARYCS------VVPTNIFVGNGSDEIIHLIMLAFI-NKGDVVIY 105 (351)
T ss_pred CHHHHHHHHHHhhcC---cccCCCCcc-HHHHHHHHHHHhC------CCcccEEEecCHHHHHHHHHHHhc-CCCCEEEE
Confidence 788999988777532 246687654 7899999999974 678999999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|..|...++..|++++.+++++ +|++|++.+++++++. ++++|++++||||||.+++.+++++| |+
T Consensus 106 ~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l---~~ 175 (351)
T PRK14807 106 PHPSFAMYSVYSKIAGAVEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKI---IE 175 (351)
T ss_pred eCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHH---HH
Confidence 99999999999999999999999864 5789999999999753 78999999999999999997666665 45
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+++.++|+||+|.++ + +. ...+ .. ....++|+++||||.+ |+||+|+||+++ ++++++.+....
T Consensus 176 ~~~~~~ivDe~y~~~-~-~~-~~~~---~~------~~~~~vi~~~S~SK~~-~~~GlRiG~~v~---~~~~~~~~~~~~ 239 (351)
T PRK14807 176 KSRGIVVVDEAYFEF-Y-GN-TIVD---VI------NEFENLIVLRTLSKAF-GLAGLRVGYAVA---NENILKYLNLVK 239 (351)
T ss_pred hCCCEEEEeCcchhh-c-cc-chHH---Hh------hhCCCEEEEecchHhc-ccchhceeeeec---CHHHHHHHHHcc
Confidence 667889999999885 2 32 1111 11 1223689999999999 899999999998 999999887765
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
. .++.+.+.|.++..+|.+ .+.++..+.++++++.+.+.|++++|+.+.+ .+|+|+|++++
T Consensus 240 ~-~~~~~~~~q~~~~~~l~~------------~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~----- 300 (351)
T PRK14807 240 S-PYNINSLSQVIALKVLRT------------GVLKERVNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK----- 300 (351)
T ss_pred C-CCCcCHHHHHHHHHHHhH------------HHHHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC-----
Confidence 4 366788999999888852 1234455567788888999998888887654 55678896654
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
+...++ +.|.++||.+.++..+. ...++|||+++.. ++.+.+++.|++++
T Consensus 301 ----------~~~~~~-~~l~~~gV~v~~~~~~~--~~~~~iRis~~~~-~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 ----------DADYVY-QGLLERGILVRDFSKVE--GLEGALRITVSSC-EANDYLINGLKELL 350 (351)
T ss_pred ----------CHHHHH-HHHHHCCEEEEECCCCC--CCCCeEEEEcCCH-HHHHHHHHHHHHhh
Confidence 123333 45567899999865432 2234999999854 34577777776643
No 96
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.1e-40 Score=333.72 Aligned_cols=298 Identities=15% Similarity=0.192 Sum_probs=230.2
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeE
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~ 239 (533)
...|++.. ..+||+++|++++ +++++|++|+|+++++..+++. + ++| .|++++|+|..|...++..|+++
T Consensus 34 ~~~Yp~~~-~~~lr~~ia~~~~------~~~~~I~it~Gs~~~l~~~~~~-~-~~~-~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 34 ISIYPEIS-YTDIEDQIKIYTQ------GLKIKVLIGPGLTHFIYRLLSY-I-NVG-NIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred cccCcCcC-HHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHHH-h-CCC-cEEEeCCChHHHHHHHHHcCCeE
Confidence 44687765 7899999999986 6789999999999999999974 5 576 57777999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccC
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~ 319 (533)
+.+|++. +++|.+.++ .. ++++|++++||||||.+++.+++++|+++|++++++||+||+|.+|.+++
T Consensus 104 ~~vp~~~---~~~~~~~l~----~~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 104 SALPFNL---INNNPEILN----NY-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR 171 (332)
T ss_pred EEEeCCc---ccCcHHHHh----hc-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc
Confidence 9999874 355655443 22 68999999999999999999999999999999999999999999987643
Q ss_pred CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcC
Q 009517 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMS 399 (533)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~ 399 (533)
. .+...+.. ...++|+++||||++ ||||+|+||+++ ++++++.+.+... .+..+..++.++.. .
T Consensus 172 ~---~~~~~~~~------~~~~vi~~~SfSK~~-~l~GlRiGy~v~---~~~li~~l~~~~~-~~~~~~~~~~~l~~-~- 235 (332)
T PRK06425 172 A---EEDVLLNR------SYGNVIIGRSLTKIL-GIPSLRIGYIAT---DDYNMKISRKITE-PWSVCDPAIDFIRS-I- 235 (332)
T ss_pred c---hhHHHHhc------cCCCEEEEeecHHhc-CCchhhheeeec---CHHHHHHHHHcCC-CCccCHHHHHHHHH-h-
Confidence 1 23323221 223699999999999 899999999998 9999998877543 23334333322211 1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHH
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRL 479 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 479 (533)
....+++++++.++++++.+.+.|+++ |+.+..+.+|+|+|++++ ++..++..+
T Consensus 236 ----------~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~---------------~~~~~~~~l 289 (332)
T PRK06425 236 ----------DLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP---------------DAHDFYSYL 289 (332)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC---------------CHHHHHHHH
Confidence 022345677889999999999999998 888775556678886543 134445555
Q ss_pred HHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 480 LNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 480 l~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
+ ++||.++||..|+ ..+.++|||+++.. ++.+.++++|++++
T Consensus 290 ~-~~gi~v~~~~~f~-~~~~~~iRis~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 290 L-KNGILVRLLDDYE-CLGEQYIRIAIRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred H-HCCeEEEECCCCC-CCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 5 5799999999996 33456999999865 45688888887664
No 97
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-40 Score=318.38 Aligned_cols=353 Identities=20% Similarity=0.219 Sum_probs=282.4
Q ss_pred ccccCCCcccHHHHHHHHHHHH-hhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCe
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIE-ARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~-~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
..+|++..|.++|...+.++.. ..+......-+|++|+|.+.+++.+++.++ +.||.|++..++|+......+..|++
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~-N~gd~vlie~~ty~~AL~s~~a~gv~ 171 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI-NRGDHVLIEEYTYPSALQSMEALGVK 171 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh-cCCCceEEecccchHHHHhccccCce
Confidence 6789999999999999999766 233333444589999999999999999999 99999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhc---CCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAK---GITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~---g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
+++|+++++ |+++|.|++.+...... .+++++++.. +-+||||..++.+..++|.++|++|+++||+||+|.-
T Consensus 172 ~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~ 248 (472)
T KOG0634|consen 172 IIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF 248 (472)
T ss_pred EEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce
Confidence 999999866 89999999999876332 2456555544 4599999999999999999999999999999999998
Q ss_pred ccccC-------CCCcccHHHHHh----hcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-c
Q 009517 315 NVYVP-------EKKFHSFKKVSR----SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-V 382 (533)
Q Consensus 315 ~~~~~-------~~~~~~~~~~~~----~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~ 382 (533)
+.|+. ..+..+...+.. .....+-+++||...||||.+ + ||+|+||+.+ ++-+++.+-.... .
T Consensus 249 Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKii-a-PGlRlG~it~---~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 249 LQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKII-A-PGLRLGWITG---NSLFLKRILDLAEVA 323 (472)
T ss_pred eeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhh-c-CcceeEEeec---CHHHHHHHhhhccee
Confidence 88862 223333222222 222226788999999999998 4 8999999998 8878877766665 7
Q ss_pred cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CC--ceEecCCceeEEecccCCCHH
Q 009517 383 NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-EG--ITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 383 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g--~~~~~~~gg~~~~~~~~~~~~ 459 (533)
+.+++.+.|.++.++|+.. .-+.|.+++.+++..|..|++.+..+|.+. |. .++++|.+|||+|++++.+.
T Consensus 324 t~~pSg~sq~iv~a~l~~w-----gqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~- 397 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRW-----GQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYIN- 397 (472)
T ss_pred ecCcccccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccc-
Confidence 7889999999999998742 234567788899999999999999999884 54 67889999999998775221
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCc----eEEEEec-CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTW----HFRCTIL-PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~----~iRis~~-~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
.+ .+..++..++.....+.++||.+++|..|...++.. +||++++ .+.|+++++++|+..++++....
T Consensus 398 -~~--~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 398 -FD--TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred -cc--cccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 11 111233345566678889999999999997553332 9999998 88889999999999999987653
No 98
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-40 Score=301.96 Aligned_cols=385 Identities=16% Similarity=0.166 Sum_probs=313.1
Q ss_pred cccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHH
Q 009517 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (533)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v 144 (533)
+..++..+..+++...+.+..+ .++..+||++|.++.+..+|| ...+
T Consensus 6 f~~I~~a~p~~vf~~~~~y~~d--------~~p~KvnL~igAYRtd~g~PW-------------------------vLPv 52 (410)
T KOG1412|consen 6 FANIPVAPPIEVFKLNASYGED--------LDPVKVNLGIGAYRTDDGKPW-------------------------VLPV 52 (410)
T ss_pred hcCCccCChHHHHhhHHHhccc--------CCcceeecccceEEcCCCCee-------------------------Eehh
Confidence 4556666777777777777642 335689999999999999998 5668
Q ss_pred HHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCE-----EEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI-----FLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i-----~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
++++...+.++.. .+++|.|..|++.++++.++.+-+.....+..+++ +.++|+...-.-++..++ ...+|+
T Consensus 53 Vk~~e~~i~~d~s-~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~--~~~~VY 129 (410)
T KOG1412|consen 53 VKKAEKKIANDQS-LNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFY--NKNTVY 129 (410)
T ss_pred hhhhhhhccCchh-ccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhc--ccceeE
Confidence 8888887776655 68999999999999999999997655555666664 445555554455555555 456899
Q ss_pred EcCCcCcchHHHHHHhC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC--CCCCccCCCHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIV 296 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p--~NPtG~~~s~~~l~~i~ 296 (533)
+.+|+|.++..+++.+| .++..|++-+.++-.+|++.+...|+.+ +.+.|++.+. |||||..+++|+|++|+
T Consensus 130 ~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A-----Pe~si~iLhaCAhNPTGmDPT~EQW~qia 204 (410)
T KOG1412|consen 130 VSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA-----PEGSIIILHACAHNPTGMDPTREQWKQIA 204 (410)
T ss_pred ecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC-----CCCcEEeeeccccCCCCCCCCHHHHHHHH
Confidence 99999999999999999 5677888887777889999999999986 6667766643 99999999999999999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH--
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-- 374 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~-- 374 (533)
++.++++++.++|-+|++|.-+ .+..+...+...+ ..+..+++++||+|+| ||+|.|+|.+..+..++..+.
T Consensus 205 ~vik~k~lf~fFDiAYQGfASG--D~~~DawAiR~fV---~~g~e~fv~QSFaKNf-GlYneRvGnltvv~~n~a~i~~v 278 (410)
T KOG1412|consen 205 DVIKSKNLFPFFDIAYQGFASG--DLDADAWAIRYFV---EQGFELFVCQSFAKNF-GLYNERVGNLTVVVNNPAVIAGV 278 (410)
T ss_pred HHHHhcCceeeeehhhcccccC--CccccHHHHHHHH---hcCCeEEEEhhhhhhc-ccccccccceEEEecChhHHHHH
Confidence 9999999999999999997653 3444444554555 4556789999999999 999999999888766666554
Q ss_pred --HHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceEecCCcee
Q 009517 375 --QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL--EG-ITCNKAEGAM 448 (533)
Q Consensus 375 --~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~gg~ 448 (533)
+|..+.. ..++|+..+..++...|+.|+ ++++|...++.|..+++++|..|++.|..+ || |+++..+.||
T Consensus 279 ~SQl~lviR~~~SNPPAyGArIV~kvL~tP~----lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGM 354 (410)
T KOG1412|consen 279 KSQLTLVIRSNWSNPPAYGARIVHKVLSTPE----LREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGM 354 (410)
T ss_pred HHHHHHHHhhccCCCcchhhHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccc
Confidence 4444444 678999999999999999875 889999999999999999999999999998 77 9999999999
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~ 527 (533)
|.+.++.. ..++.+.+.+.|++. ..| ||+++ ++..++++.+++|.+.++.+
T Consensus 355 FSyTGLtp-----------------~qV~~li~~h~vyLl-------~~G----RInisGLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 355 FSYTGLTP-----------------AQVDHLIENHKVYLL-------SDG----RINISGLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred eeecCCCH-----------------HHHHHHHHhceEEEe-------cCC----cEeeeccccccHHHHHHHHHHHHHhh
Confidence 99987651 125677888999998 466 99996 99999999999999999876
Q ss_pred H
Q 009517 528 M 528 (533)
Q Consensus 528 ~ 528 (533)
.
T Consensus 407 ~ 407 (410)
T KOG1412|consen 407 K 407 (410)
T ss_pred c
Confidence 4
No 99
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=6.4e-40 Score=332.79 Aligned_cols=326 Identities=20% Similarity=0.326 Sum_probs=262.4
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|||++|++.. +. |+.+++++.++... ...|++..| .+||+++|
T Consensus 20 ~~i~l~~~~~~~----------------------~~-------~~~~~~a~~~~~~~-----~~~y~~~~~-~~lr~~ia 64 (346)
T TIGR01141 20 EVIKLNSNENPF----------------------GP-------PPKAKEALRAEADK-----LHRYPDPDP-AELKQALA 64 (346)
T ss_pred ceEEccCCCCCC----------------------CC-------CHHHHHHHHHhHHH-----hhcCCCCCH-HHHHHHHH
Confidence 499999999764 22 78899998887643 457888776 89999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++ +++++|++|+|+++++..++..+. ++||+|++++|+|+.|...+...|.+++.++++.+ +.+|++.+
T Consensus 65 ~~~~------~~~~~i~~~~G~~~~l~~~~~~l~-~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l 135 (346)
T TIGR01141 65 DYYG------VDPEQILLGNGSDEIIELLIRAFL-EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDI 135 (346)
T ss_pred HHhC------cChHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHH
Confidence 9985 668899999999999999999988 79999999999999999899999999999998754 57999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++.+.+ ++++|++++|+||||.+++.+++++|++.|+ +++++|+||+|..+.+.+ ... ..... .
T Consensus 136 ~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~--~~~---~~~~~----~ 199 (346)
T TIGR01141 136 LVAIDD------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP--STL---PLLAE----Y 199 (346)
T ss_pred HHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc--cHH---HHHhh----C
Confidence 998754 7899999999999999999999999888887 799999999999865432 111 22111 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
+ ++|++.||||.+ |++|+|+||+++ ++++++++..... .++.++++|.++..+++.. .+.++
T Consensus 200 ~--~~i~~~S~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-----------~~~~~ 261 (346)
T TIGR01141 200 P--NLIVLRTLSKAF-GLAGLRIGYAIA---NAEIIDALNKVRA-PFNLSRLAQAAAIAALRDD-----------DFIEK 261 (346)
T ss_pred C--CEEEEehhhHhh-hchhhhceeeec---CHHHHHHHHhccC-CCCCCHHHHHHHHHHhCCH-----------HHHHH
Confidence 2 478999999998 789999999998 8999998877653 4677889999988888631 24567
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
++++++++++.+++.|.+++|+++. +.+++|+|++++. +...++. .|.++||.+.||..|+..
T Consensus 262 ~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~--------------~~~~~~~-~L~~~gI~v~~g~~f~~~- 324 (346)
T TIGR01141 262 TVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR--------------DADALFE-ALLEKGIIVRDLNSYPGL- 324 (346)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC--------------CHHHHHH-HHHHCCeEEEeCCCcCCC-
Confidence 7888899999999999988888855 4567788866541 2344444 455689999999998633
Q ss_pred CCceEEEEecCCcCcHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRL 520 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l 520 (533)
.+++|||++ ++++++++++.|
T Consensus 325 -~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 325 -PNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred -CCeEEEecC-CHHHHHHHHHHh
Confidence 459999988 567788888766
No 100
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-40 Score=335.54 Aligned_cols=299 Identities=20% Similarity=0.312 Sum_probs=239.0
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCe
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
...|++.. ..+|+++++++++ +++++|++|+|+++++..+++.++ ++| |+|+++.|+|..|...++..|++
T Consensus 51 ~~~Yp~~~-~~~l~~~~a~~~g------~~~~~I~~~~Gs~e~i~~~~~~~~-~~g~~~vli~~P~y~~y~~~~~~~G~~ 122 (351)
T PRK01688 51 LNRYPECQ-PKAVIENYAAYAG------VKPEQVLVSRGADEGIELLIRAFC-EPGKDAILYCPPTYGMYSVSAETIGVE 122 (351)
T ss_pred cccCCCCC-hHHHHHHHHHHhC------CCHHHEEEcCCHHHHHHHHHHHhc-CCCCCEEEEcCCCHHHHHHHHHHcCCE
Confidence 45688776 5789999998874 789999999999999999999998 787 89999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccc
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~ 318 (533)
++.+++++ +|++|++.+++++ + ++++|+++|||||||.+++.+++++|++.|++ +.+||+||+|.+|..
T Consensus 123 ~~~v~~~~--~~~~d~~~l~~~~-~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~- 191 (351)
T PRK01688 123 IRTVPTLD--NWQLDLPAIADNL-D------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCP- 191 (351)
T ss_pred EEEeecCC--CCCCCHHHHHHhc-c------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCC-
Confidence 99999864 5899999999887 3 68999999999999999999999999999976 688999999998652
Q ss_pred CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHc
Q 009517 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM 398 (533)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L 398 (533)
. .+...+... ..++|+++||||+| |++|+|+||+++ ++++++.+.+... .++.+.++|.++..+|
T Consensus 192 -~---~s~~~~~~~------~~n~iv~rSfSK~~-glaGlRiGy~i~---~~~~i~~l~~~~~-~~~v~~~~~~~a~~~L 256 (351)
T PRK01688 192 -Q---ASLAGWLAE------YPHLVILRTLSKAF-ALAGLRCGFTLA---NEEVINLLLKVIA-PYPLSTPVADIAAQAL 256 (351)
T ss_pred -C---CChHHHHhh------CCCEEEEecchHhh-cCHHHHHhHHhC---CHHHHHHHHhccC-CCCCCHHHHHHHHHHH
Confidence 2 122233322 23589999999999 899999999998 9999998887653 4667788888888888
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHH
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRR 478 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (533)
.+.. .+++++.++.++++|+++.+.|++++++..+.|.+++|+|+++. +...+...
T Consensus 257 ~~~~---------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---------------~~~~l~~~ 312 (351)
T PRK01688 257 SPQG---------IAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT---------------ASSAVFKS 312 (351)
T ss_pred hcch---------HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---------------CHHHHHHH
Confidence 5321 23455667778888999999999887776566777889997653 12344444
Q ss_pred HHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHH
Q 009517 479 LLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520 (533)
Q Consensus 479 ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l 520 (533)
|.++||.++++..|... .+++|||++. .++++.++++|
T Consensus 313 -L~~~gi~vr~~~~~~~~--~~~iRis~~~-~~e~~~l~~al 350 (351)
T PRK01688 313 -LWDQGIILRDQNKQPGL--SNCLRITIGT-REECQRVIDAL 350 (351)
T ss_pred -HHHCCeEEEECCCcCCC--CCeEEEeCCC-HHHHHHHHHhh
Confidence 45789999987655312 3499999984 46678887776
No 101
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.9e-39 Score=331.33 Aligned_cols=324 Identities=18% Similarity=0.285 Sum_probs=253.1
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|++.+ +. ++.+++++.+.+.. ...|++..+ .+||+++|+
T Consensus 36 ~i~l~~~~~~~----------------------~~-------~~~~~~~~~~~~~~-----~~~y~~~~~-~~lr~~ia~ 80 (361)
T PRK00950 36 IIKLGSNENPL----------------------GP-------SPKAVEAIEKELSK-----IHRYPEPDA-PELREALSK 80 (361)
T ss_pred eEEccCCCCCC----------------------CC-------CHHHHHHHHHHHHh-----hcCCCCCCH-HHHHHHHHH
Confidence 99999998664 21 67788888776654 456887664 899999999
Q ss_pred HHHhhcCCCCCCCCEEE-cCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPNDIFL-TDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
+++ +++++|++ |+|+++++..+++.++ ++||+|++++|+|..|...++..|++++.++.+ ++|++|++.+
T Consensus 81 ~~~------~~~~~i~~~~~Ga~~~i~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l 151 (361)
T PRK00950 81 YTG------VPVENIIVGGDGMDEVIDTLMRTFI-DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSV 151 (361)
T ss_pred HhC------CCHHHEEEeCCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHH
Confidence 974 67889999 7899999999999987 799999999999999999999999999999854 4678999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++.+++ +++++++++|+||||.+++.++ |.++|+++|+++|+||+|.+|. +. ... .+...
T Consensus 152 ~~~~~~------~~~~v~~~~p~nptG~~~~~~~---l~~l~~~~~~~li~De~y~~~~--~~-~~~---~~~~~----- 211 (361)
T PRK00950 152 LNAITE------KTKVIFLCTPNNPTGNLIPEED---IRKILESTDALVFVDEAYVEFA--EY-DYT---PLALE----- 211 (361)
T ss_pred HHHhcc------CCCEEEEeCCCCCCCCCcCHHH---HHHHHHHCCcEEEEECchhhhC--cc-chH---HHHHh-----
Confidence 998865 7899999999999999999655 5556678899999999999864 21 111 22221
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
..++++++||||.+ |++|+|+||+++ ++++++.+.+... .++.+.++|.++..++.+. +++++
T Consensus 212 -~~~vi~~~S~SK~~-g~~GlRiG~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~-----------~~~~~ 274 (361)
T PRK00950 212 -YDNLIIGRTFSKVF-GLAGLRIGYGFV---PEWLIDYYMRAKT-PFSLTRLSQAAAIAALSDK-----------EYIEK 274 (361)
T ss_pred -cCCEEEEEeehHhh-cCchhhcchhcC---CHHHHHHHHHhcC-CCCCCHHHHHHHHHHhcCH-----------HHHHH
Confidence 22579999999999 899999999998 9999988877654 3557888998888888531 33456
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
+++.++++++.+.+.|+ +.+ .+.+++|+|++++ . .+...++..++ ++||.+.||..|+ ..
T Consensus 275 ~~~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~~--~-----------~~~~~~~~~l~-~~gv~v~~~~~f~-~~ 334 (361)
T PRK00950 275 SIEHGIKSREYLYNELP----FKV-YPSEANFVLVDVT--P-----------MTAKEFCEELL-KRGVIVRDCTSFR-GL 334 (361)
T ss_pred HHHHHHHHHHHHHhhcC----eeE-CCCcceEEEEECC--C-----------CCHHHHHHHHH-HCCEEEeeCCccC-CC
Confidence 66778888888887775 444 4567789997663 1 12455555554 5799999999886 34
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
+.++||||++ +.+++++++++|++++
T Consensus 335 ~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 335 GDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 4569999998 4567899999998865
No 102
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=5.7e-39 Score=326.51 Aligned_cols=327 Identities=19% Similarity=0.249 Sum_probs=254.2
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|.. +. |+.+.+++.+.+.. ...|+ ..|..+||+++|+
T Consensus 24 ~i~l~~~~~~~----------------------~~-------~~~~~~a~~~~~~~-----~~~y~-~~g~~~lr~~ia~ 68 (352)
T PRK03321 24 AIKLSSNETPF----------------------GP-------LPSVRAAIARAAAG-----VNRYP-DMGAVELRAALAE 68 (352)
T ss_pred ceeccCCCCCC----------------------CC-------CHHHHHHHHHHHHh-----cCcCC-CCcHHHHHHHHHH
Confidence 89999998874 21 57788887776653 45675 4689999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++ +++++|++|+|+++++..++..++ ++||+|+++.|+|..|...++..|.+++.+++++ ++++|++.++
T Consensus 69 ~~~------~~~~~I~~~~G~~~~l~~~~~~~~-~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~ 139 (352)
T PRK03321 69 HLG------VPPEHVAVGCGSVALCQQLVQATA-GPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMA 139 (352)
T ss_pred HhC------cCHHHEEECCCHHHHHHHHHHHhc-CCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHH
Confidence 985 678899999999999999999888 7999999999999999989999999999999874 3588999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+++++ ++++|++++||||||.+++.+++.++++.+ +++++||+||+|.++.+++. ...++..+ +.
T Consensus 140 ~~~~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~-~~~~~~~~-------~~ 204 (352)
T PRK03321 140 AAITD------RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDD-VPDGLELV-------RD 204 (352)
T ss_pred Hhhcc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcC-CCcHHHHH-------hh
Confidence 99876 789999999999999999988888877765 47999999999999888553 21222221 22
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 418 (533)
..++|+++||||.| |+||+|+||+++ ++++++.+.+.. ..++.+.++|.++.++|... +.+ .+.
T Consensus 205 ~~~vi~~~S~SK~~-g~~GlRiG~~v~---~~~~~~~~~~~~-~~~~~s~~~q~~a~~~l~~~-------~~~----~~~ 268 (352)
T PRK03321 205 HPNVVVLRTFSKAY-GLAGLRVGYAVG---HPEVIAALRKVA-VPFSVNSLAQAAAIASLAAE-------DEL----LER 268 (352)
T ss_pred CCCEEEEecchHHh-hhHHHhhhhhcC---CHHHHHHHHHhc-CCCCCCHHHHHHHHHHhcCH-------HHH----HHH
Confidence 34689999999999 899999999998 899999988764 45788999999888887521 122 223
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
.+.+.++++.+.+.|++. |+.+.+ .+|+|+|+++.. +...++.. |+++||.+.| |+ .
T Consensus 269 ~~~~~~~r~~~~~~L~~~-~~~~~~-~~g~~i~i~l~~--------------~~~~~~~~-l~~~gI~v~~---~~-~-- 325 (352)
T PRK03321 269 VDAVVAERDRVRAALRAA-GWTVPP-SQANFVWLPLGE--------------RTADFAAA-AAEAGVVVRP---FA-G-- 325 (352)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccCC-CCCCEEEEeCCC--------------CHHHHHHH-HHHCCEEEEc---cC-C--
Confidence 334445567788999887 776544 457889976531 13444444 5779999997 43 2
Q ss_pred CceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 499 TWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 499 ~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
.+|||+++. .++.++++++|++++.
T Consensus 326 -~~iRi~~~~-~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 326 -EGVRVTIGA-PEENDAFLRAARAWRA 350 (352)
T ss_pred -CcEEEeeCC-HHHHHHHHHHHHHHhc
Confidence 269999964 4567999999988754
No 103
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-38 Score=319.15 Aligned_cols=314 Identities=18% Similarity=0.261 Sum_probs=240.9
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|++|++++ ++ |+.+++++.+.+... ....|++. |.++||+++|
T Consensus 20 ~~i~l~~~~~~~----------------------~~-------p~~~~~~~~~~~~~~---~~~~Y~~~-~~~~Lr~aia 66 (335)
T PRK14808 20 DRTYLALNENPF----------------------PF-------PEDLVDEVFRRLNSD---TLRIYYDS-PDEELIEKIL 66 (335)
T ss_pred ceeEecCCCCCC----------------------CC-------CHHHHHHHHHHhhhh---hhhcCCCC-ChHHHHHHHH
Confidence 389999999875 33 788888888776541 13447665 7999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
+++++. + +++++|++|+|+++++..+++.+ |.|++++|+|+.|..+++.+|++++.+|++++ +.++...
T Consensus 67 ~~~~~~-~--~~~~~i~it~Ga~~~i~~~~~~~-----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~- 135 (335)
T PRK14808 67 SYLDTD-F--LSKNNVSVGNGADEIIYVMMLMF-----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN- 135 (335)
T ss_pred HHhCCC-C--CCcceEEEcCCHHHHHHHHHHHh-----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH-
Confidence 999764 3 67899999999999999999876 46999999999999999999999999998753 4444322
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
+ . ++++++++|||||||.++|.+++++|+ +++++||+||+|.+|. +. ... .....
T Consensus 136 ---~-~------~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~--~~-~~~---~~~~~----- 190 (335)
T PRK14808 136 ---V-G------EGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEFH--GE-SYV---DLLKK----- 190 (335)
T ss_pred ---c-c------CCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhhc--CC-chH---HHHHh-----
Confidence 2 1 468999999999999999988888876 4799999999999963 32 121 22222
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
..++|+++||||++ |++|+|+||+++ ++++++.+.+.. ..++.+.++|.++..++++. ++..+
T Consensus 191 -~~~vi~~~S~SK~~-~l~GlRvG~~v~---~~~~~~~l~~~~-~~~~~~~~~q~a~~~~l~~~-----------~~~~~ 253 (335)
T PRK14808 191 -YENLAVIRTFSKAF-SLAAQRIGYVVS---SEKFIDAYNRVR-LPFNVSYVSQMFAKVALDHR-----------EIFEE 253 (335)
T ss_pred -CCCEEEEEechhhc-cCcccceEEEEe---CHHHHHHHHHhc-CCCCCCHHHHHHHHHHHhCH-----------HHHHH
Confidence 12689999999999 899999999998 999999987765 34778889999998888521 23345
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
..+.++++++.+.+.|+++ |+.+.+++|+ |+|+.++.. +... +.+.|.++||.|+. |.
T Consensus 254 ~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~-f~~~~l~~~-------------~~~~-~~~~l~~~Gi~V~~---~~--- 311 (335)
T PRK14808 254 RTKFIVEERERMKSALREM-GYRITDSRGN-FVFIFMEKE-------------EKER-LLEHLRAKNIAVRS---FR--- 311 (335)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEECCCCCe-EEEEeCCCc-------------cHHH-HHHHHHHCCeEEEE---CC---
Confidence 5567777788999999998 8888888766 568655411 1233 34566778999995 32
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
.++||+++.. ++.+++++.|++
T Consensus 312 --~~~Risi~~~-~~~~~~~~~l~~ 333 (335)
T PRK14808 312 --EGVRITIGKR-EENDMILKELEV 333 (335)
T ss_pred --CCeEEecCCH-HHHHHHHHHHHh
Confidence 2799999864 445778877764
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.7e-38 Score=319.43 Aligned_cols=289 Identities=20% Similarity=0.276 Sum_probs=232.0
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeE
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~ 239 (533)
...|++..| ++||++++++++ +++++|++|+|+++++..+.+.+ .+| .|++++|+|..|...++..|.++
T Consensus 41 ~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~t~G~~~~i~~~~~~l--~~g-~vl~~~p~y~~~~~~~~~~g~~~ 110 (330)
T TIGR01140 41 WARYPDPEY-DELRAAAAAYYG------LPAASVLPVNGAQEAIYLLPRLL--APG-RVLVLAPTYSEYARAWRAAGHEV 110 (330)
T ss_pred HhhCCCccH-HHHHHHHHHHhC------CChhhEEECCCHHHHHHHHHHHh--CCC-eEEEeCCCcHHHHHHHHHcCCEE
Confidence 567888775 999999999974 56899999999999999987764 577 79999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccC
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~ 319 (533)
+.++ |++.+++.++ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+..
T Consensus 111 ~~~~---------d~~~l~~~~~-------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 174 (330)
T TIGR01140 111 VELP---------DLDRLPAALE-------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA 174 (330)
T ss_pred EEeC---------CHHHHHhhcc-------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc
Confidence 8886 6889988873 47789999999999999999999999999999999999999999876531
Q ss_pred CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcC
Q 009517 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMS 399 (533)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~ 399 (533)
++..+. +...++|+++||||++ |++|+|+||+++ ++++++.+..... .++.+.++|.++..+++
T Consensus 175 -----~~~~~~------~~~~~~i~~~S~SK~~-g~~G~R~G~i~~---~~~~~~~l~~~~~-~~~~s~~~q~~~~~~l~ 238 (330)
T TIGR01140 175 -----SLAPQA------ARFPGLVVLRSLTKFF-GLAGLRLGFVVA---HPALLARLREALG-PWTVNGPARAAGRAALA 238 (330)
T ss_pred -----chhhHh------ccCCCEEEEEecchhh-cCchhhhhheeC---CHHHHHHHHhcCC-CCCchHHHHHHHHHHHh
Confidence 222221 1234689999999999 899999999998 8899988887653 46678889999999986
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHH
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRL 479 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 479 (533)
+. .+.+.++++++++++.+.+.|++++.+.+. +.+++|+|++++ +..++++++
T Consensus 239 ~~-----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~---------------~~~~l~~~l 291 (330)
T TIGR01140 239 DT-----------AWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP---------------DAAALHEAL 291 (330)
T ss_pred ch-----------HHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC---------------CHHHHHHHH
Confidence 42 223456788999999999999998446654 557899997644 134455555
Q ss_pred HHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHH
Q 009517 480 LNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520 (533)
Q Consensus 480 l~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l 520 (533)
+ ++||.+.||..|+. .+.++|||+++...++ ++++++|
T Consensus 292 ~-~~gi~v~pg~~f~~-~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 292 A-RRGILIRDFDNFPG-LDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred H-HCCEEEEECCCCCC-CCCCEEEEEecCHHHH-HHHHHhh
Confidence 5 57999999999952 3345999999865554 6666655
No 105
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-38 Score=322.29 Aligned_cols=297 Identities=19% Similarity=0.277 Sum_probs=234.1
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCe
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
...|++.. ..+||+++|++++ +++++|++|+|+++++..+++.++ ++| |+|+++.|+|..|...++..|++
T Consensus 54 ~~~Yp~~~-~~~Lr~aia~~~~------~~~~~I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~P~y~~y~~~~~~~g~~ 125 (354)
T PRK04635 54 LNRYPECQ-PPELINAYSAYAG------VAPEQILTSRGADEAIELLIRAFC-EPGQDSIACFGPTYGMYAISAETFNVG 125 (354)
T ss_pred hccCCCCC-HHHHHHHHHHHhC------cCHHHEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 45698874 8999999999874 789999999999999999999998 788 99999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccc
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~ 318 (533)
++.+|+++ +|++|++.++. + + ++++|+++|||||||.+++.+++++|++.|+ +++||+||+|.+|...
T Consensus 126 v~~v~~~~--~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~ 193 (354)
T PRK04635 126 VKALPLTA--DYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE 193 (354)
T ss_pred EEEEecCC--CCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC
Confidence 99999864 57899998873 3 3 7899999999999999999999999998876 4999999999986531
Q ss_pred CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHc
Q 009517 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM 398 (533)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L 398 (533)
.+...+... ..++|+++||||.+ |++|+|+||+++ ++++++.+.+... .++.+...|.++..+|
T Consensus 194 -----~s~~~~~~~------~~~~iv~~S~SK~~-~l~GlRlG~~i~---~~~~~~~l~~~~~-~~~~~~~~~~~a~~~l 257 (354)
T PRK04635 194 -----YSVADLLAS------YPNLVVLRTLSKAF-ALAGARCGFTLA---NEELIEILMRVIA-PYPVPLPVSEIATQAL 257 (354)
T ss_pred -----cchHHHHhh------CCCEEEEechHHHh-hhhHHHHhhhhC---CHHHHHHHHhhcC-CCCCCHHHHHHHHHHH
Confidence 122233221 23579999999998 899999999998 9999988876543 4667778888888887
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHH
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRR 478 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (533)
.+.. .+++++.++.++++++.+.+.|++++++.+.+++| .|+|++++ . ...+ .+
T Consensus 258 ~~~~---------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g-~f~~~~~~--~-------------~~~~-~~ 311 (354)
T PRK04635 258 SEAG---------LARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNG-NYVLAKFD--D-------------VDAV-FK 311 (354)
T ss_pred hccc---------HHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-cEEEEECC--C-------------HHHH-HH
Confidence 5421 13345667778999999999999986688777765 57786543 1 2233 35
Q ss_pred HHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 479 LLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 479 ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
+|+++||.++++..++ ..+++|||++. .++++.++++|++
T Consensus 312 ~l~~~gv~v~~~~~~~---~~~~lRis~~~-~e~~~~l~~al~~ 351 (354)
T PRK04635 312 ALWDAGIVARAYKDPR---LANCIRFSFSN-RAETDKLIGLIRN 351 (354)
T ss_pred HHHHCCEEEEECCCCC---CCCeEEEEeCC-HHHHHHHHHHHHH
Confidence 6778999998754332 23499999974 5667877777754
No 106
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-38 Score=317.56 Aligned_cols=301 Identities=20% Similarity=0.335 Sum_probs=230.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+... ....|++ .|.++||++++++++ +++++|++|+|+++++..+++.+ +||+|++
T Consensus 33 ~~~~~~~~~~~~~~~---~~~~Y~~-~g~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~~~~---~gd~V~v 99 (337)
T PRK03967 33 PEELKEEIFEELKRV---PFNRYPH-ITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLVKLF---EGKHIVI 99 (337)
T ss_pred CHHHHHHHHHHhhcC---ccccCCC-CCHHHHHHHHHHHhC------cCcceEEEcCCHHHHHHHHHHHh---CCCeEEE
Confidence 688888888877542 2467864 689999999999985 77899999999999999888765 6899999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|..|..+++..|.+++.++++. +|++|++.+++.+ + +++++++++||||||.+++.+++.+| +
T Consensus 100 ~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~------~~~~v~~~~P~NPtG~~~~~~~l~~i---~- 166 (337)
T PRK03967 100 TPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-K------NASAVFICSPNNPTGNLQPEEEILKV---L- 166 (337)
T ss_pred eCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-c------CCCEEEEeCCCCCCCCCCCHHHHHHH---H-
Confidence 99999999999999999999999874 5789999998764 2 67899999999999999997666655 4
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
++++++|+||+|.+|. +. +.. .+.. ...++|+++||||+| |+||+|+||+++ ++++++.+.+..
T Consensus 167 ~~~~~ii~De~y~~~~--~~-~~~---~~~~------~~~~vi~l~S~SK~~-~l~GlRiG~iv~---~~~~i~~~~~~~ 230 (337)
T PRK03967 167 ETGKPVVLDEAYAEFS--GK-SLI---GLID------EYPNLILLRTFSKAF-GLAGIRAGYAIA---NEEIIDALYRIK 230 (337)
T ss_pred hcCCEEEEECchhhhc--cc-chH---HHHh------hCCCEEEEecchHhh-cchhhhheeeec---CHHHHHHHHhhc
Confidence 4799999999999864 21 111 2211 223589999999999 899999999998 999999988776
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
. .++.+.++|.++..+|++. ++..+.++.+.++++.+.+.|.+. ..|.+++|+|++++
T Consensus 231 ~-~~~~~~~~q~~~~~~l~~~-----------~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~~----- 288 (337)
T PRK03967 231 P-PFSLNILTMKIVRLALDHY-----------DLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKLD----- 288 (337)
T ss_pred C-CCCCCHHHHHHHHHHHhCH-----------HHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhHH-----
Confidence 4 3677899999999998631 123334445566677888888764 34688999996542
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+. +.|.++||.++++... ..+++||+++.. ++.++++++|.++.+
T Consensus 289 --------------~~-~~l~~~gi~v~~~~~~----~~~~~Ri~~~~~-~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 289 --------------AY-DYLLENGIVVRKLSGR----LEGHIRVTVGKR-EENDEFIKALKEIKE 333 (337)
T ss_pred --------------HH-HHHHHCCEEEEeCCCC----CCCeEEEecCCH-HHHHHHHHHHHHHHH
Confidence 12 3445679999986532 234999999853 334677777766544
No 107
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4e-38 Score=317.31 Aligned_cols=287 Identities=18% Similarity=0.241 Sum_probs=226.0
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeE
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~ 239 (533)
..|++.. .+||+++|++++ +. +++|++|+|+++++..+.. ++ ++|+ |++++|+|+.|...++.+|+++
T Consensus 49 ~~Yp~~~--~~L~~~ia~~~~------~~~~~~I~i~~Gs~e~i~~l~~-~~-~~g~-v~v~~P~y~~y~~~~~~~g~~~ 117 (339)
T PRK06959 49 RRLPEDD--DGLAACAARYYG------APDAAHVLPVAGSQAAIRALPA-LL-PRGR-VGIAPLAYSEYAPAFARHGHRV 117 (339)
T ss_pred HhCCCch--HHHHHHHHHHhC------CCCcccEEECcCHHHHHHHHHH-hc-CCCe-EEEcCCCcHHHHHHHHHCCCEE
Confidence 4588653 899999999975 43 5899999999999997765 45 6776 8999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccC
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~ 319 (533)
+.++.+. +. +.+ .+++++++|||||||.+++.+++++|++.|++++.++|+||+|.+|.+.
T Consensus 118 ~~v~~~~--------~~----~~~------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~- 178 (339)
T PRK06959 118 VPLDEAA--------DT----LPA------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA- 178 (339)
T ss_pred Eeecccc--------hh----ccc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-
Confidence 9887642 11 222 4678999999999999999999999999999999999999999996542
Q ss_pred CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcC
Q 009517 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMS 399 (533)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~ 399 (533)
.++..+. ...++|+++||||.| |++|+|+||+++ ++++++.+.+... .++.+.++|.++.++|+
T Consensus 179 ----~s~~~~~-------~~~~vi~l~SfSK~~-gl~GlRiGy~v~---~~~li~~l~~~~~-~~~vs~~~q~a~~~~L~ 242 (339)
T PRK06959 179 ----ASLAAHT-------DRPGLVVLRSVGKFF-GLAGVRAGFVLA---APALLAALRDALG-AWTVSGPARHAVRAAFA 242 (339)
T ss_pred ----ccchhcc-------CCCCEEEEecChhhc-CCcchheEEEec---CHHHHHHHHHhcC-CCCCcHHHHHHHHHHhC
Confidence 2222221 123489999999999 899999999998 9999999988764 46678999999999996
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHH
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRL 479 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 479 (533)
+. ++.+++++.++++++.+.+.|+++ |+.+. .+++|+|++++ +...+. ..
T Consensus 243 ~~-----------~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~---------------~~~~l~-~~ 292 (339)
T PRK06959 243 DA-----------AWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP---------------RAAALH-AA 292 (339)
T ss_pred cH-----------HHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC---------------CHHHHH-HH
Confidence 42 234567788999999999999998 87665 35789997643 122333 45
Q ss_pred HHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 480 LNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 480 l~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
|.++||.+++ |+ .. +++||+++.+.+++++++++|+++++.+..
T Consensus 293 l~~~GI~vr~---~~-~~--~~lRisi~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 293 LARRGIWTRY---FA-PP--PSVRFGLPADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred HHhCCeEEEE---CC-CC--CeEEEECCCCHHHHHHHHHHHHHHHHHHhh
Confidence 5678999985 43 22 289999976667889999999988876653
No 108
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.1e-37 Score=313.48 Aligned_cols=280 Identities=19% Similarity=0.267 Sum_probs=218.2
Q ss_pred ccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEE
Q 009517 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVP 241 (533)
Q Consensus 162 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~ 241 (533)
.|+.. ..+||++++++++ .++|++|+|+++++..++. + .+||+|++++|+|+.|...++..|++++.
T Consensus 46 ~yp~~--~~~Lr~~ia~~~~--------~~~I~it~Gs~~al~~~~~--~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~ 112 (330)
T PRK05664 46 RLPET--DDGLEAAARAYYG--------APQLLPVAGSQAAIQALPR--L-RAPGRVGVLSPCYAEHAHAWRRAGHQVRE 112 (330)
T ss_pred hCCCC--hHHHHHHHHHHhC--------CCCEEECcCHHHHHHHHHH--c-cCCCEEEEcCCChHHHHHHHHHcCCeEEE
Confidence 37653 4899999999974 4799999999999998863 4 68999999999999999999999999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCC
Q 009517 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (533)
Q Consensus 242 v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~ 321 (533)
++++ +++++++ +++++++++||||||.+++.+++++|+++|++++++||+||+|.++. .
T Consensus 113 v~~~----------~~~~~~~-------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~--~-- 171 (330)
T PRK05664 113 LDEA----------EVEAALD-------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT--P-- 171 (330)
T ss_pred echh----------hHhhhhc-------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC--C--
Confidence 8753 3444442 57789999999999999999999999999999999999999998743 2
Q ss_pred CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCC
Q 009517 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~ 401 (533)
..++..+ .++.++|+++||||++ |+||+|+||+++ ++++++.+.+... .++.+.+.|.++..+|.+.
T Consensus 172 -~~s~~~~-------~~~~~vi~~~SfSK~~-gl~GlRiG~~v~---~~~l~~~~~~~~~-~~~~~~~~~~~~~~~L~~~ 238 (330)
T PRK05664 172 -QHSLAAC-------AHRPGLIVLRSFGKFF-GLAGARLGFVLA---EPALLRALAELLG-PWTVSGPTRWLAQAALADT 238 (330)
T ss_pred -ccccccc-------ccCCCEEEEeeccccc-cCCCcceEEEEe---CHHHHHHHHHhcC-CCCCCHHHHHHHHHHHhCh
Confidence 1232222 2334689999999999 899999999998 9999999887653 4567889999999998642
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCce--eEEecccCCCHHHHHHHHhcCCCChHHHHHHH
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGA--MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRL 479 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 479 (533)
.+.+.+++.++++++.+.+.|+++ |+. +.++ +|+|++++ +...+. +.
T Consensus 239 -----------~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~~~~---------------~~~~~~-~~ 287 (330)
T PRK05664 239 -----------PWQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWVRTE---------------DAAALH-EF 287 (330)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEEecC---------------CHHHHH-HH
Confidence 223567888999999999999988 653 4445 77775432 133444 45
Q ss_pred HHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 480 LNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 480 l~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
|.++||.|.+ |+ .. ++|||+++.+.++++++++.|+++.+
T Consensus 288 l~~~gi~v~~---f~-~~--~~iRis~~~~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 288 LARRGILTRL---FE-QP--ASLRFGLPADEADWARLDQALLAYRK 327 (330)
T ss_pred HHHCCeEEEE---CC-CC--CeEEEECCCCHHHHHHHHHHHHHHHh
Confidence 6778999985 54 22 39999998655666777766665543
No 109
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=3.4e-37 Score=307.46 Aligned_cols=287 Identities=17% Similarity=0.303 Sum_probs=211.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+.. ...|+. ...||++++++++ ++|++|+|+++++..++..+ .+||+|++
T Consensus 22 p~~~~~a~~~~~~~-----~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al~~~~~~~--~~gd~vlv 82 (311)
T PRK08354 22 PEWLDEMFERAKEI-----SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEALYLIGILA--LRDRKVII 82 (311)
T ss_pred CHHHHHHHHHHHHH-----hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHHHHHHHhh--CCCCeEEE
Confidence 56777777766553 345764 4678999998873 47999999999999888644 48999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|..|..+++..|.+++.+ ++|++.+++.++ +++++++++||||||.+++.+++++|+++|+
T Consensus 83 ~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~-------~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~ 147 (311)
T PRK08354 83 PRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE-------RNSVVFFCNPNNPDGKFYNFKELKPLLDAVE 147 (311)
T ss_pred eCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc-------CCCEEEEecCCCCCCCccCHHHHHHHHHHhh
Confidence 9999999999999999999764 457888888765 3568999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
++|+++|+||+|.+|.+++. . . +..++|+++||||+| |+||+|+||+++ +++.+.+..
T Consensus 148 ~~~~~li~De~y~~f~~~~~-~-~-------------~~~~vi~~~S~SK~~-~l~GlRiG~~v~------~~~~l~~~~ 205 (311)
T PRK08354 148 DRNALLILDEAFIDFVKKPE-S-P-------------EGENIIKLRTFTKSY-GLPGIRVGYVKG------FEEAFRSVR 205 (311)
T ss_pred hcCcEEEEeCcchhcccccc-c-c-------------CCCcEEEEeccHhhc-CCccceeeeeee------hHHHHHHcC
Confidence 99999999999999888542 1 0 123689999999999 899999999986 344454443
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
..+..+..++.++..++.+ .+ +++++.++.++++++.+.+.+ ..+|+++|+++ ++.
T Consensus 206 -~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~l~~~l-------~~~~~~~~~~~-~~~----- 261 (311)
T PRK08354 206 -MPWSIGSTGYAFLEFLIED------DF----EHLRKTMPLIWREKERFEKAL-------YVKSDANFFIK-DVG----- 261 (311)
T ss_pred -CCccCCHHHHHHHHHHHHh------HH----HHHHHHHHHHHHHHHHHHHhc-------CCCCCCcEEEE-ECC-----
Confidence 2345566777777777642 11 233444445555555544433 23577777664 332
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
++..++. .|.++||.+.||..|+. + ++|||+++..++ .+++++.|++
T Consensus 262 ----------~~~~~~~-~l~~~gv~v~~g~~f~~-~--~~iRi~~~~~~~-~~~l~~al~~ 308 (311)
T PRK08354 262 ----------DAEKFVE-FLKRNGILVRDCTSFGL-P--GYIRFSVRDREE-NEKLIRALRE 308 (311)
T ss_pred ----------CHHHHHH-HHHHCCeEEEecccCCC-C--CeEEEEeCCHHH-HHHHHHHHHH
Confidence 1334444 45678999999999973 3 399999985443 3555555554
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.1e-35 Score=308.39 Aligned_cols=378 Identities=16% Similarity=0.175 Sum_probs=276.8
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCc--CCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQ--SLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~--~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++..++++.+..+..+++++++.|.+ +|+|++|+|. + .++.. +
T Consensus 12 r~~~v~~~~~~~~~~~~~~l~~~g~~---------~~~L~~g~p~~D~----------------------~tds~----t 56 (460)
T PRK13238 12 RIKMVEPIRLTTREERERALAEAGYN---------PFLLKSEDVFIDL----------------------LTDSG----T 56 (460)
T ss_pred eeceeccccccCHHHHHHHHHHcCCC---------EEeCCCCCCCCCC----------------------CCCCC----c
Confidence 35567788888899999999998888 9999999994 3 22110 1
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
..+.+++.+++.. ....|++..|+.+||++++++++ .++|++|+|+++|+..++.+++ ++|| |+++
T Consensus 57 ~a~~~a~~~a~~~----g~~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt~A~~~~~~all-~pGD-Vii~ 122 (460)
T PRK13238 57 GAMSDRQWAAMMR----GDEAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGRAAEQILFPVLI-KKGD-VVPS 122 (460)
T ss_pred hhhhHHHHHHHHh----CCcccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHHHHHHHHHHHhC-CCCC-EEcc
Confidence 2567777777754 35689999999999999999985 3579999999999999999998 8999 9999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCC------CCCC--CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc-cCCCHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEA------TGWG--LETSEVKKQLEAAKAKGITVRALVVINPGNPTG-QVLAEENQ 292 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~------~~~~--ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG-~~~s~~~l 292 (533)
+|.|..|...+..+|++++.+++++. ++|. +|++.|++.|++.. .+++++|++++|+|||| .+++.+++
T Consensus 123 ~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l 200 (460)
T PRK13238 123 NYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANL 200 (460)
T ss_pred CCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHH
Confidence 99999999999999999999998642 3455 99999999998531 02699999999999997 99999999
Q ss_pred HHHHHHHHHcCCEEEEcccc--ccccccC----CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee------
Q 009517 293 RAIVDFCKKEGLVLLADEVY--QENVYVP----EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG------ 360 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri------ 360 (533)
++|+++|++||++||+|+++ ....|.. .....++..+.. .+.|++|.+ .++||++
T Consensus 201 ~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~------------~~~s~~D~~-~~Sg~K~g~~~~G 267 (460)
T PRK13238 201 RAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAR------------EMFSYADGL-TMSAKKDAMVNIG 267 (460)
T ss_pred HHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhh------------hhcccCcEE-EEecccCCCCcce
Confidence 99999999999999999966 3344422 112334433321 234555555 4555554
Q ss_pred EEEEEecCCHHHHHHHHHhh----h-ccccCC-hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 361 GYMEVTGFSAEVREQIYKVA----S-VNLCSN-ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 361 G~v~~~~~~~~~~~~l~~~~----~-~~~~~~-~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
|++++ .++++++.+.... . .++++. ...|.|++..|.... + +...+...+++++|.+.|+
T Consensus 268 G~i~~--~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~----------~--~~~~~~~~~~~~~l~~~L~ 333 (460)
T PRK13238 268 GLLCF--RDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM----------D--EDYLAYRIGQVEYLGEGLE 333 (460)
T ss_pred eEEEc--ChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh----------C--hHHHHHHHHHHHHHHHHHH
Confidence 35554 1368888887663 2 345554 444666666553210 0 1111222335789999999
Q ss_pred cCCCceEecCCceeEEecccCC-CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----C------CceEE
Q 009517 435 SLEGITCNKAEGAMYLFPRIQL-PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP----G------TWHFR 503 (533)
Q Consensus 435 ~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~----g------~~~iR 503 (533)
+. |+.++.|.||+|+|+++.- ..+. ...+. .+..++.+|+++.||.+.|+..|.... + ...+|
T Consensus 334 ~~-G~~~~~p~Gg~~v~~d~~~~~~~~----~~~~~-~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~R 407 (460)
T PRK13238 334 EA-GVPIQTPAGGHAVFVDAGKFLPHI----PAEQF-PAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLR 407 (460)
T ss_pred HC-CCCeEccCCceEEEEEchhcCCCC----CCCCC-chHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEE
Confidence 98 9999999999999988751 0000 00011 246678899999999999999885322 2 35899
Q ss_pred EEecC---CcCcHHHHHHHHHHHHH
Q 009517 504 CTILP---QEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 504 is~~~---~~e~i~~~~~~l~~~l~ 525 (533)
+++.. +.+++++++++|+++.+
T Consensus 408 la~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 408 LAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred EecccccCCHHHHHHHHHHHHHHHH
Confidence 99974 88999999999988664
No 111
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=272.48 Aligned_cols=388 Identities=21% Similarity=0.284 Sum_probs=277.4
Q ss_pred cccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHH-
Q 009517 72 VRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ- 150 (533)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~- 150 (533)
.+++-+.+-.++..-..|-++.+..+..|.|+.|+|.. .|+ -....+.+..
T Consensus 5 ~fGdkft~~sGi~~lMdDl~d~Lrt~g~imLggGNPa~-----------------------iPe-----m~~~f~~~~ae 56 (417)
T COG3977 5 LFGDKFTRHSGITQLMDDLNDGLRTPGAIMLGGGNPAR-----------------------IPE-----MDDYFQDLLAE 56 (417)
T ss_pred hhhHHhhhhhhHHHHHHHHHhhccCCCceeeCCCCccc-----------------------Chh-----HHHHHHHHHHH
Confidence 34444444455555555555566677799999999985 111 1122222221
Q ss_pred HHhcC-CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC--CC--CeEEEc-CCc
Q 009517 151 ILDQI-PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS--EN--DGILCP-IPQ 224 (533)
Q Consensus 151 ~~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~g--d~Vlv~-~p~ 224 (533)
.+.+. ......+|..++|...|.++++++++++||+.++++||.+|+|++.+...++..+-.+ .| .+|++| .|.
T Consensus 57 mla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPe 136 (417)
T COG3977 57 MLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPE 136 (417)
T ss_pred HHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChh
Confidence 12111 1113567999999999999999999999999999999999999999999999888521 23 346665 599
Q ss_pred CcchHHHHHHhCCeEE---EEecCCCC--CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 225 YPLYSASIALHGGTLV---PYYLDEAT--GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 225 ~~~~~~~~~~~g~~~~---~v~~~~~~--~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
|.+|.++.-.-..=+. .+...+.. .|.+|++.+.-. + .+.+|++.-|.||||.+++++++.+|.++|
T Consensus 137 YiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~--e------~~g~ic~SRPtNPTGNVlTdeE~~kldalA 208 (417)
T COG3977 137 YIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG--E------STGAICVSRPTNPTGNVLTDEELAKLDALA 208 (417)
T ss_pred hccccccccCccceeeccCCcccccccceeeccCHHHcccc--c------ccceEEecCCCCCCCCcccHHHHHHHHHHh
Confidence 9998764322111111 11122222 356788887643 2 789999999999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
++||+.+|.|.+|.- -| |..-+.....- .+.++|.|.|+|| + |+||.|+|.+++ ++++++.+..+
T Consensus 209 ~~~giPliIDnAYg~-PF----P~iifsd~~~~-----w~~NiilC~SLSK-~-GLPG~R~GIiIa---ne~viqaitnm 273 (417)
T COG3977 209 RQHGIPLIIDNAYGV-PF----PGIIFSDATPL-----WNENIILCMSLSK-L-GLPGSRCGIIIA---NEKVIQAITNM 273 (417)
T ss_pred hhcCCcEEEecccCC-CC----Cceeccccccc-----CCCCEEEEeehhh-c-CCCCcceeEEEc---cHHHHHHHHhc
Confidence 999999999999963 11 11111111111 3446899999999 4 899999999998 99999999988
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--CceEecCCceeEEecccC
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-E--GITCNKAEGAMYLFPRIQ 455 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~gg~~~~~~~~ 455 (533)
.. ....+..++++++..+++.++ ..+..+ +.++-.|+++.+...+.|++. | -+.+.+|+|+.|+|+.++
T Consensus 274 n~iisLap~~~G~Aia~~mie~gd-----l~rlse--qVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~ 346 (417)
T COG3977 274 NGIISLAPGRMGPAIAAEMIESGD-----LLRLSE--QVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFK 346 (417)
T ss_pred cceeeecCCCccHHHHHHHhhcch-----HHHHHH--HhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhc
Confidence 86 567888999999999998654 222222 334556888888777777653 3 467789999999998875
Q ss_pred -CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC------CCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 456 -LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP------GTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 456 -~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~------g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+| +++.+.+ +.|++.||+++||+.|...- ...++|+++..++++|+.++.+|.+.+++..
T Consensus 347 dLP-----------Itt~~LY--q~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 347 DLP-----------ITTEELY--QRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred cCC-----------CCHHHHH--HHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 33 3344444 78899999999999885211 1248999999989999999999999888765
Q ss_pred HH
Q 009517 529 DK 530 (533)
Q Consensus 529 ~~ 530 (533)
++
T Consensus 414 q~ 415 (417)
T COG3977 414 QE 415 (417)
T ss_pred hc
Confidence 53
No 112
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=5.3e-34 Score=289.59 Aligned_cols=335 Identities=27% Similarity=0.450 Sum_probs=264.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++..+.+..+ .... . ....|.+..|..+++++++++++..++.....+++++++|+++++..++..+. .+||+|++
T Consensus 13 ~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~g~~vl~ 88 (350)
T cd00609 13 PPEVLEALAA-AALR-A-GLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-NPGDEVLV 88 (350)
T ss_pred CHHHHHHHHH-Hhhc-c-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC-CCCCEEEE
Confidence 4555555544 1111 1 36778999999999999999999887776778899999999999999999998 78999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|.++..+++..|.+++.++.++...+..+.+.++..+.+ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~ 162 (350)
T cd00609 89 PDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELEELAELAK 162 (350)
T ss_pred cCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 9999999999999999999999998654433333555555443 7999999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH-HHHHHHHHh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQIYKV 379 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~-~~~~~l~~~ 379 (533)
++|+++|+|++|+++.+.+... . ..... .....++++.|++|.+ +++|.|+||+++ ++ ++++.+...
T Consensus 163 ~~~~~~ivD~a~~~~~~~~~~~--~---~~~~~---~~~~~~~~~~s~~K~~-~~~g~~~G~i~~---~~~~~~~~~~~~ 230 (350)
T cd00609 163 KHGILIISDEAYAELVYDGEPP--P---ALALL---DAYERVIVLRSFSKTF-GLPGLRIGYLIA---PPEELLERLKKL 230 (350)
T ss_pred hCCeEEEEecchhhceeCCccc--c---cccCc---CccCcEEEEeeccccc-CCcccceEEEec---CHHHHHHHHHHH
Confidence 9999999999999987754321 1 00111 2333578899999998 678999999998 77 888888776
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCH
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPE 458 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~ 458 (533)
.. .+++++...+.++..+|+... ++.+++++.++++++++.+.|++.+.+.+..+.+++++|++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~- 299 (350)
T cd00609 231 LPYTTSGPSTLSQAAAAAALDDGE----------EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG- 299 (350)
T ss_pred HHhcccCCChHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC-
Confidence 65 567889999999988886321 456778888999999999999998444435677889999765522
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHH
Q 009517 459 KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLT 521 (533)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~ 521 (533)
.....+.++|.++||.+.++..|.. .+..+|||+++...++|++++++|+
T Consensus 300 ------------~~~~~~~~~l~~~gi~i~~~~~~~~-~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 300 ------------DDEEFLERLLLEAGVVVRPGSAFGE-GGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred ------------ChHHHHHHHHHhCCEEEeccccccc-CCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 1334466888889999999988862 3445999999855889999998885
No 113
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=5.7e-31 Score=272.39 Aligned_cols=331 Identities=15% Similarity=0.168 Sum_probs=234.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+++.+... ....|....|..++++++++++.+.+|. .++|++|+| ++++..+++.++ ++||+|++
T Consensus 58 ~~~i~~a~~~~~~~~~~-~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~~~~~~~l~-~~gd~vi~ 131 (397)
T PRK06939 58 HPELIAAAKAALDSHGF-GMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDANGGLFETLL-GKEDAIIS 131 (397)
T ss_pred CHHHHHHHHHHHHHcCC-CCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHHHHHHHHhC-CCCCEEEE
Confidence 68889888888865311 1223344578899999999999988773 267888887 778888999888 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+.+...+..+|++++.++. .|++++++.+++....+.++++|++.+.+||||...+ +++|+++|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~---~~~l~~la~ 201 (397)
T PRK06939 132 DALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP---LPEICDLAD 201 (397)
T ss_pred EhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC---HHHHHHHHH
Confidence 999999999999999999877753 4789999988764322336777877778999998655 899999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||++||+||+|....+..... ..... ..+ .++ .+|++.||||++ + |+|+||+++ ++++++.+....
T Consensus 202 ~~~~~li~De~~~~g~~~~~~~--~~~~~-~~~---~~~-~~i~~~S~sK~~-~--g~r~G~v~~---~~~~~~~l~~~~ 268 (397)
T PRK06939 202 KYDALVMVDDSHAVGFVGENGR--GTVEH-FGV---MDR-VDIITGTLGKAL-G--GASGGYTAG---RKEVIDWLRQRS 268 (397)
T ss_pred HhCCEEEEECcccccCcCCCCC--CHHHH-cCC---CCC-CcEEEEECHHHh-C--ccCceEEEe---CHHHHHHHHHhC
Confidence 9999999999996322211111 11111 111 122 358899999998 3 679999998 899998887643
Q ss_pred h-c--cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCC
Q 009517 381 S-V--NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLP 457 (533)
Q Consensus 381 ~-~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~ 457 (533)
. . ....++..+.++.++++ +.++.++++++++++++++.+.|+++ ++.+..+.++++.+. +.
T Consensus 269 ~~~~~~~~~~~~~~~a~~~al~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~-~~-- 333 (397)
T PRK06939 269 RPYLFSNSLAPAIVAASIKVLE-----------LLEESDELRDRLWENARYFREGMTAA-GFTLGPGEHPIIPVM-LG-- 333 (397)
T ss_pred ccccccCCCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEEE-EC--
Confidence 2 1 12223344454444442 11222467788999999999999988 777777777776442 22
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-CCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 458 EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-VPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
... +...++..+++ +||.+.++. |+. ..+.++|||+++ .++++|++++++|++++++.
T Consensus 334 ~~~----------~~~~~~~~L~~-~gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 334 DAK----------LAQEFADRLLE-EGVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CHH----------HHHHHHHHHHH-CCceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 110 13455656555 599999654 432 234458999984 78899999999999988764
No 114
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2.6e-30 Score=270.71 Aligned_cols=342 Identities=15% Similarity=0.140 Sum_probs=248.2
Q ss_pred CHHHHHHHHHHHhcCCC---CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+++++++.+++.+... .....|++..+..+|++++|++++ .++.|++++|++ ++..++.++. ++||.
T Consensus 125 ~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s~G~~-a~~sai~a~~-~~gd~ 195 (481)
T PLN02822 125 NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYSYGLS-TIFSVIPAFC-KKGDI 195 (481)
T ss_pred CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEECCHHH-HHHHHHHHhC-CCCCE
Confidence 78999999999987421 122357888889999999999985 356799998877 5788888888 89999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc---CCCe-eEEEEeCCCCCCccCCCHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK---GITV-RALVVINPGNPTGQVLAEENQR 293 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~---g~~~-~~iil~~p~NPtG~~~s~~~l~ 293 (533)
|++....|..+...+...|.+++.++.+ |.++++..+++.+.. .+++ ++|+++.++|+||.+++ ++
T Consensus 196 Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~ 265 (481)
T PLN02822 196 IVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LD 265 (481)
T ss_pred EEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HH
Confidence 9988877777777888889999888765 455666655543221 1234 68888899999999999 89
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|+++|++||+++|+||+|+...++.... .+... ..+ ..+...|++.||||++ |++| ||+++ +++++
T Consensus 266 ~i~~l~~k~~~~LIvDEa~s~gvlG~~G~--G~~e~-~~v---~~~~~dii~~s~sKal-g~~G---G~i~g---~~~ii 332 (481)
T PLN02822 266 EIVRLKEKYRFRVLLDESNSFGVLGKSGR--GLSEH-FGV---PIEKIDIITAAMGHAL-ATEG---GFCTG---SARVV 332 (481)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCC--ChHHH-cCC---CCCCCeEEEecchhhh-hhCC---eEEEc---CHHHH
Confidence 99999999999999999999766642111 11111 111 1122348899999999 7778 99988 99999
Q ss_pred HHHHHhhh-ccccC--ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEE
Q 009517 374 EQIYKVAS-VNLCS--NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYL 450 (533)
Q Consensus 374 ~~l~~~~~-~~~~~--~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~ 450 (533)
+.+..... .+++. ++..+.++.++|+ ..+...+++++++++++++++.|++++|+.+..+.+++++
T Consensus 333 ~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~-----------~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~ 401 (481)
T PLN02822 333 DHQRLSSSGYVFSASLPPYLASAAITAID-----------VLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIV 401 (481)
T ss_pred HHHHhcCCceeeccccCHHHHHHHHHHHH-----------HHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEE
Confidence 98875443 44544 4667777777764 1222256778899999999999999878888878889999
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcC--CCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPG--SGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg--~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
++.++.+.+.... .......++.++++++||++.|+ ..|+......++||+++ +++++|++++++|++++++
T Consensus 402 ~l~l~~~~~~~~~----~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 402 FLHLEKSTGSAKE----DLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred EEEeCCCcccccc----hHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 8776522100000 00012457778887899999986 44543223347999875 8999999999999999887
Q ss_pred HHH
Q 009517 527 FMD 529 (533)
Q Consensus 527 ~~~ 529 (533)
+..
T Consensus 478 ~~~ 480 (481)
T PLN02822 478 VLK 480 (481)
T ss_pred Hhc
Confidence 653
No 115
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=2.4e-30 Score=264.10 Aligned_cols=320 Identities=16% Similarity=0.131 Sum_probs=224.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcc----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
|+++++++.+++.+... ....|....| ..+++++++++++ .++.|++++|+ +++..++..++ ++||
T Consensus 32 ~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~~G~-~~~~~~l~~~~-~~gd 101 (360)
T TIGR00858 32 HPEVIQAAQQGAEQYGA-GSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFSSGY-LANVGVISALV-GKGD 101 (360)
T ss_pred CHHHHHHHHHHHHhcCC-CCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEECchH-HHHHHHHHHhC-CCCC
Confidence 68899999888865321 1222322233 4557777777763 24677777775 55556777777 7999
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+|+++.|+|..+...++..|.+++.++. +|++.+++.++... ++++++|++.+++||||...+ +++|.
T Consensus 102 ~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~---~~~i~ 169 (360)
T TIGR00858 102 LILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAP---LPQLV 169 (360)
T ss_pred EEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcC---HHHHH
Confidence 9999999999999999999999887763 58999999987520 124678888899999999887 89999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|+++|+++|+||+|..+.++.. ..+.... ..+ .++..+|++.||||+| |++| ||+++ ++++++.+
T Consensus 170 ~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~-~~~---~~~~~~i~i~s~sK~~-~~~g---G~~~~---~~~~~~~~ 236 (360)
T TIGR00858 170 ALAERYGAWLMVDDAHGTGVLGED--GRGTLEH-FGL---KPEPVDIQVGTLSKAL-GSYG---AYVAG---SQALIDYL 236 (360)
T ss_pred HHHHHcCcEEEEECcccccCcCCC--CCchHHh-cCC---CccCCcEEEEechhhh-hccC---cEEEc---CHHHHHHH
Confidence 999999999999999987655432 1121121 112 2345689999999998 6555 99987 88888887
Q ss_pred HHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 377 YKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 377 ~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
..... .+.+.++..+.++.++++ +....+.++++++++++++.+.|+++ ++.+.++ ++.++|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~a~~~al~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~ 303 (360)
T TIGR00858 237 INRARTLIFSTALPPAVAAAALAALE-----------LIQEEPWRREKLLALIARLRAGLEAL-GFTLMPS-CTPIVPVI 303 (360)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHH-----------HHhhCHHHHHHHHHHHHHHHHHHHHc-CCccCCC-CCCEEEEE
Confidence 65432 123345555555555553 22223456788999999999999998 7776644 45567755
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
++... ++..+... |.++||.+.++..++...+.+++||++. ++++++++++++|+
T Consensus 304 ~~~~~------------~~~~~~~~-l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 304 IGDNA------------SALALAEE-LQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred eCCHH------------HHHHHHHH-HHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 43110 13344444 4568999999877653344568999997 68899999998773
No 116
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=7.2e-30 Score=256.70 Aligned_cols=304 Identities=16% Similarity=0.172 Sum_probs=220.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
.+.+++++.+.+... + |..++.+++.+.+.+.+| .+++++++++|+.+|+..++.+++ ++||+|++
T Consensus 35 ~~~~~~~~~~~~~~~--------~---g~~~~~~~Le~~lA~~~g--~~~e~ilv~~gg~~a~~~~~~al~-~~gd~Vli 100 (346)
T TIGR03576 35 GFKIDEEDLELLETY--------V---GPAIFEEKVQELGREHLG--GPEEKILVFNRTSSAILATILALE-PPGRKVVH 100 (346)
T ss_pred ChhHHHHHHHHHHHh--------c---CCHHHHHHHHHHHHHHcC--CCcceEEEECCHHHHHHHHHHHhC-CCCCEEEE
Confidence 578888888888762 1 333444444444444445 567899999999999999999998 89999997
Q ss_pred c---CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 221 P---IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 221 ~---~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
+ .|+|..|...++..|++++.+ .|++.++. . +++++|+++ ++||+|.+++.+++++|++
T Consensus 101 ~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-------~~~~lIiit-g~s~~G~v~~~~~L~~i~~ 162 (346)
T TIGR03576 101 YLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-------DGTSLVVIT-GSTMDLKVVSEEDLKRVIK 162 (346)
T ss_pred CCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-------cCceEEEEE-CCCCCCcccCHHHHHHHHH
Confidence 5 479999999999999886432 14555322 1 157777774 5799999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|+++|+++|+||+|..+...... ..+.. .. ..+ |++.||||++ +|+|+||+++ ++++++.+.
T Consensus 163 la~~~~~~livDEAy~~~~~~~~~-~~~~~----~~---~~d---ivv~s~SKal---aG~r~G~v~~---~~~li~~l~ 225 (346)
T TIGR03576 163 QAKSKEAIVLVDDASGARVRRLYG-QPPAL----DL---GAD---LVVTSTDKLM---DGPRGGLLAG---RKELVDKIK 225 (346)
T ss_pred HHHHcCCEEEEECCccccccccCC-CCCHH----Hc---CCc---EEEeccchhc---cccceEEEEe---CHHHHHHHH
Confidence 999999999999999876532100 11111 11 123 6678999954 6999999998 999999998
Q ss_pred Hhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCC
Q 009517 378 KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 378 ~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~ 456 (533)
+... ..++.+++.|.++.++|+.. . .+.+++.++++++++.+.++++ .+.++.++ |+|++++.
T Consensus 226 ~~~~~~~~s~~~~~~~aa~~aL~~~-----------~-~~~~~~~l~~r~~~~~~~l~~~---~~~~~~~~-f~~~~~~~ 289 (346)
T TIGR03576 226 SVGEQFGLEAQAPLLAAVVRALEEF-----------E-LSRIRDAFKRKEEVYLRLFDKL---NVERTPTG-FVIKGVEE 289 (346)
T ss_pred HhhcCcccCccHHHHHHHHHHHhhc-----------c-HHHHHHHHHHHHHHHHHHHHhC---CCCcCCCe-EEEEeCCC
Confidence 8765 34556888888888888531 1 2445677888888888888754 44444555 78876641
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcC---cHHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQED---KIPAIVTRLTDFH 524 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e---~i~~~~~~l~~~l 524 (533)
.++..++.++|+++||.++||..|.. ..+|+|||++.+++ +.+.++++|++.+
T Consensus 290 -------------~~~~~~~~~ll~~~gV~v~~~~~f~~--~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 290 -------------EKLIEIGLDLLRNYGIITITAVGMPG--ASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -------------CCHHHHHHHHHHhCCEEEeCCcccCC--CCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 12345677899999999999998842 23499999997664 6788888887654
No 117
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=5.2e-30 Score=262.40 Aligned_cols=362 Identities=15% Similarity=0.231 Sum_probs=255.9
Q ss_pred HHHHHHHHhhcCCCCCCccceeeccCCCC--cCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCC
Q 009517 79 IAQRLQQELQTNPGSHSFDEILYCNIGNP--QSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (533)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p--~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~ 156 (533)
+++++++.|.+ ++.|..|+| ++ .++. + -..+.++..+++..
T Consensus 2 r~~~l~~~g~n---------~~~l~~~~v~iDl----------------------ltds---~-t~ams~~~~~a~~~-- 44 (431)
T cd00617 2 RERALKEAGYN---------VFLLRSEDVYIDL----------------------LTDS---G-TGAMSDYQWAAMML-- 44 (431)
T ss_pred hHHHHHHcCCC---------EEeCCCCCcCCCC----------------------CCCC---C-cHHHHHHHHHHHHh--
Confidence 56777887777 999999998 43 2200 0 13455555666654
Q ss_pred CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhC
Q 009517 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG 236 (533)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g 236 (533)
....|++..|+.+|+++++++++ .+++++|+|+++|+..++.+++ +|||+| +++|+|..+...+...|
T Consensus 45 --gd~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~Gt~Al~la~~al~-~pGD~V-~~~~~f~~~~~~i~~~G 112 (431)
T cd00617 45 --GDEAYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQGRGAENILFSILL-KPGRTV-PSNMHFDTTRGHIEANG 112 (431)
T ss_pred --CCCccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHHhC-CCCCEE-ccCCcccchHHHHHhCC
Confidence 24569999999999999999985 3589999999999999999998 899987 69999999999999999
Q ss_pred CeEEEEecCCCCC------CC--CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 237 GTLVPYYLDEATG------WG--LETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 237 ~~~~~v~~~~~~~------~~--ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt-G~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
++++.+++++..+ |. +|++.|+++|++. ...++++|++++|+||+ |.+++.+++++|.++|++||++||
T Consensus 113 a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li 190 (431)
T cd00617 113 AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVV 190 (431)
T ss_pred CEeEEEecccccccccccCCCCCcCHHHHHHHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999986533 44 9999999999862 01148899999999998 999999999999999999999999
Q ss_pred Eccccc--ccccc----CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe------eEEEEEecCCH-HHHH
Q 009517 308 ADEVYQ--ENVYV----PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR------GGYMEVTGFSA-EVRE 374 (533)
Q Consensus 308 ~De~y~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r------iG~v~~~~~~~-~~~~ 374 (533)
+|++.. ...|. ++....++..+.. .+.|++|.+ .|+||| .||+++ ++ ++++
T Consensus 191 ~DaAr~~~na~~i~~r~~g~~~~si~ei~~------------e~~s~sd~~-~mS~~K~~~~~~GG~i~~---~d~~l~~ 254 (431)
T cd00617 191 LDAARFAENAYFIKEREEGYRDKSIAEIAR------------EMFSYADGC-TMSAKKDGLVNIGGFLAL---RDDELYE 254 (431)
T ss_pred EEchhhHhhhhhhhcccccccCCCHHHHHH------------HhhccCCEE-EEEeecCCCCccceEEEe---CcHHHHH
Confidence 999943 22221 1223344444322 256677776 567776 668887 54 6888
Q ss_pred HHHHhh----h-ccccC-ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcee
Q 009517 375 QIYKVA----S-VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAM 448 (533)
Q Consensus 375 ~l~~~~----~-~~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~ 448 (533)
+++... . .++++ +.....+++..|+... + .+.+.++++ ++++|.+.|.+. |+.++.|.|++
T Consensus 255 ~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~----------~-~~~l~~~~~-~r~~l~~~L~~~-G~~v~~P~Ggh 321 (431)
T cd00617 255 EARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV----------E-EDYLRHRVE-QVRYLGDRLDEA-GVPIVEPAGGH 321 (431)
T ss_pred HHHHhccccCCccccccccHHHHHHHHHHHHhcc----------c-HHHHHHHHH-HHHHHHHHHHHC-CCCccCCCcce
Confidence 877432 1 12222 2222333333453211 0 122333333 558999999998 99999999999
Q ss_pred EEecccC--CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-CCC-CCC--CCC------CceEEEEec---CCcCcH
Q 009517 449 YLFPRIQ--LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-GSG-FGQ--VPG------TWHFRCTIL---PQEDKI 513 (533)
Q Consensus 449 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g~~-f~~--~~g------~~~iRis~~---~~~e~i 513 (533)
|+|++++ +|.. ...+ -++..++.+++++.||.+.- |.. ++. ..+ -..+|+++. -+.+++
T Consensus 322 ~v~~d~~~~~~~~-----~~~~-~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~ 395 (431)
T cd00617 322 AVFIDAREFLPHI-----PQEQ-FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHM 395 (431)
T ss_pred EEEEEhHHhcCCC-----Cccc-CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHH
Confidence 9998765 1100 0000 14667788999999999654 441 121 111 247999993 688899
Q ss_pred HHHHHHHHHHHHH
Q 009517 514 PAIVTRLTDFHKN 526 (533)
Q Consensus 514 ~~~~~~l~~~l~~ 526 (533)
+.++++|.+++++
T Consensus 396 ~~~~~~~~~~~~~ 408 (431)
T cd00617 396 DYVAAAVIALYER 408 (431)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988876
No 118
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.98 E-value=9.1e-30 Score=262.98 Aligned_cols=324 Identities=18% Similarity=0.196 Sum_probs=230.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCc---cc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQ---GI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~---G~----~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 213 (533)
++++++++.+++.+. ..+|++.. |. .+|++++|++++ .+++++++|+++|+..++.+++ +
T Consensus 54 ~~~v~~~~~~~~~~~----~~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii~~~~~~a~~~~~~~l~-~ 120 (393)
T TIGR01822 54 HPDLIQAAKDALDEH----GFGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTILYASCFDANGGLFETLL-G 120 (393)
T ss_pred CHHHHHHHHHHHHHh----CCCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEEECchHHHHHHHHHHhC-C
Confidence 688999999888762 13465555 75 788888888875 2578888999999999999998 8
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHH
Q 009517 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~ 293 (533)
+||+|+++.|+|+.+...+...+.+.+.++ .+|++++++++++....+.++++|++.+++||||.+.+ ++
T Consensus 121 ~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~---l~ 190 (393)
T TIGR01822 121 AEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP---LD 190 (393)
T ss_pred CCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC---HH
Confidence 999999999999999998888887765543 46899999999864322336888888899999999988 89
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|+++|++||+++|+||+|....+ +.. ....... .++ .++ ..+++.|+||++ + |+|+||+++ +++++
T Consensus 191 ~i~~la~~~~~~li~De~~~~g~~-~~~-~~~~~~~-~~~---~~~-~di~~~s~sK~l-~--g~r~G~~~~---~~~~~ 257 (393)
T TIGR01822 191 EICDLADKYDALVMVDECHATGFL-GPT-GRGSHEL-CGV---MGR-VDIITGTLGKAL-G--GASGGFTTA---RKEVV 257 (393)
T ss_pred HHHHHHHHcCCEEEEECCccccCc-CCC-CCchHHh-cCC---CCC-CeEEEEEChHHh-h--CCCcEEEEe---CHHHH
Confidence 999999999999999999953222 211 1111111 111 122 358899999987 3 789999988 89999
Q ss_pred HHHHHhhh-c-ccc-CChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEE
Q 009517 374 EQIYKVAS-V-NLC-SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYL 450 (533)
Q Consensus 374 ~~l~~~~~-~-~~~-~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~ 450 (533)
+.+.+... . ..+ .++..+.++..+|+ ..+..++++++++++++++.+.|++. |+.+..+.+.++.
T Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~a~~~al~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 325 (393)
T TIGR01822 258 ELLRQRSRPYLFSNSLPPAVVGASIKVLE-----------MLEASNELRDRLWANTRYFRERMEAA-GFDIKPADHPIIP 325 (393)
T ss_pred HHHHHhCccceecCCCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEE
Confidence 98876432 1 122 23444444445442 12234567788999999999999887 8776655555443
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-CCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-VPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+ ..+... ....++..++ ++||.+. +..|.. ..+...+||+++ .++++|++++++|+++++++
T Consensus 326 i---~~~~~~----------~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 326 V---MLYDAV----------LAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred E---EeCCHH----------HHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 3 222110 1344555555 5699998 555532 234457999885 78999999999999987654
No 119
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=6.3e-31 Score=236.98 Aligned_cols=308 Identities=18% Similarity=0.310 Sum_probs=238.5
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeE
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTL 239 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~ 239 (533)
..|++.. -.+++.+++.- -++++|+|+++.|+.|.+..++++.+ .|| ++|+...|+|..|...+...++.+
T Consensus 64 ~~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v~A~iNd~eV 135 (375)
T KOG0633|consen 64 YVYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVVDAAINDAEV 135 (375)
T ss_pred cccCCcc-cchhhhhcccC------CCCCccceEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEEEeecCCceE
Confidence 4466655 45566555543 24789999999999999999999999 899 899999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccC
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~ 319 (533)
+.+|+.+ +|.+|.|++.+.++.. ..+|.+++++|+||||..+..+++++|.+.-. |.++++||+|-+| .|
T Consensus 136 vkvpl~p--dF~lnvdai~evl~~d----s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidF--sg 205 (375)
T KOG0633|consen 136 VKVPLNP--DFSLNVDAIAEVLELD----SKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDF--SG 205 (375)
T ss_pred EEecCCC--CccccHHHHHHHHhcc----ccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEee--cc
Confidence 9999986 7999999999999863 37899999999999999999999999988654 7899999999994 45
Q ss_pred CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcC
Q 009517 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMS 399 (533)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~ 399 (533)
.. |-..++.. ++ +++++++|||.| |++|+|+||-.. +.++++-+.++... ++.+..+..++.++|.
T Consensus 206 ~~---S~~~lV~k----Yp--NLivlqTlSKsf-GLAGiRvG~~~~---~~~ia~iln~~KaP-YNiS~~~s~~AL~Als 271 (375)
T KOG0633|consen 206 VE---SRMKLVKK----YP--NLIVLQTLSKSF-GLAGIRVGYGAF---PLSIAEILNRAKAP-YNISVAGSVAALAALS 271 (375)
T ss_pred cc---ccchHhHh----CC--ceeehhhhhhhc-CcceeEeecccc---cHHHHHHHHhccCC-ccccchhHHHHHHhcC
Confidence 21 22233333 34 489999999999 999999999987 99999988887754 7788888888888887
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHH
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRR 478 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (533)
+. ..+.++..++.+.+.|.+|...|.++|++. ++.+.-+.|+.+.+..... .-+.....+
T Consensus 272 ~~---------n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n----------~~akkly~q 332 (375)
T KOG0633|consen 272 DS---------NGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN----------GMAKKLYKQ 332 (375)
T ss_pred cc---------cchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCc----------HHHHHHHHH
Confidence 43 234567788888899999999999998766 3344445566655542211 012333456
Q ss_pred HHHccceEEEcCCCCCCCC-CCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 479 LLNATGIVLVPGSGFGQVP-GTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 479 ll~~~gV~v~pg~~f~~~~-g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
++.+.||.|+- .|..+ -.+++||+.+.++|+ ..+++.|+++
T Consensus 333 ~at~~gVvVRf---rgse~~c~G~lRitvGt~Een-tvL~k~~K~~ 374 (375)
T KOG0633|consen 333 DATKMGVVVRF---RGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF 374 (375)
T ss_pred HHHhcceEEEE---cCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence 67789999983 22222 345999999977776 7788887765
No 120
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.98 E-value=7.3e-31 Score=271.43 Aligned_cols=351 Identities=14% Similarity=0.168 Sum_probs=240.9
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +|||..|.+.. ..+.+ ++.+.+++.+++...
T Consensus 24 ~~~~~~G~~~~d~dg~~------~iD~~~g~~~~----------------------~lG~~----~p~v~~a~~~~~~~~ 71 (396)
T PRK02627 24 AFVRGEGARLWDDDGKE------YLDFLAGIAVN----------------------NLGHC----HPKLVEAIQEQAAKL 71 (396)
T ss_pred eEEeeeeCEEEeCCCCE------EEECCccHHhc----------------------cCCCC----CHHHHHHHHHHHhhc
Confidence 44555555555556666 99999887653 11100 478888988888753
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-------CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-------DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-------d~Vlv~~p~~~~~ 228 (533)
.. ....+..++++++++++.+..+ .+++++++|+++|+..+++.++ ..+ ++|++..++|+++
T Consensus 72 ~~------~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~eA~~~al~~a~-~~~~~~~~~~~~ii~~~~~yhg~ 140 (396)
T PRK02627 72 IH------TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAEANEAAIKLAR-KYGHKKGIEKPEIITAENSFHGR 140 (396)
T ss_pred cc------cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHHHHHHHHHHHH-HHhcccCCCCCeEEEECCCcCcc
Confidence 21 1112236788888888887644 4799999999999999999775 322 6799999999998
Q ss_pred HHHHHHhCCeEE-EEecCC-CCCC----CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHH
Q 009517 229 SASIALHGGTLV-PYYLDE-ATGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTG-QVLAEENQRAIVDFCKK 301 (533)
Q Consensus 229 ~~~~~~~g~~~~-~v~~~~-~~~~----~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG-~~~s~~~l~~i~~l~~~ 301 (533)
.......+.... .....+ ..++ ..|++++++++.+ ++++|++++++|||| .+++++.+++|.++|++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~ 214 (396)
T PRK02627 141 TLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDE 214 (396)
T ss_pred cHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 766655543221 111111 0111 1289999998854 799999999999999 68899999999999999
Q ss_pred cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh-
Q 009517 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA- 380 (533)
Q Consensus 302 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~- 380 (533)
||+++|+||+|.+|.+.+. ..++.. .++ .+| +.+|||.+ + +|+|+||+++ ++++++.+....
T Consensus 215 ~~~~lI~DE~~~g~g~~g~--~~~~~~--~~~---~pd-----i~t~sK~~-~-~G~rig~~~~---~~~~~~~~~~~~~ 277 (396)
T PRK02627 215 NGILLILDEVQTGMGRTGK--LFAYQH--YGI---EPD-----IMTLAKGL-G-GGVPIGAVLA---KEKVADVFTPGDH 277 (396)
T ss_pred cCCEEEEechhcCCCccCc--eeeehh--cCC---CCC-----EEEEcchh-h-CCcccEEEEE---cHHHHhccCCCCC
Confidence 9999999999999876553 222211 122 455 45799999 6 7999999998 888988876543
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecCCceeEEecccCC
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~gg~~~~~~~~~ 456 (533)
..+++.+++.|+++.++|+... . +...++++++.+.+++.|.+ .+.+..+++ .|+++|+.+..
T Consensus 278 ~~t~~~~~~~~~aa~~~l~~~~-----------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~i~~~~ 344 (396)
T PRK02627 278 GSTFGGNPLACAAALAVIEIIE-----------E-EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMIGIELDR 344 (396)
T ss_pred CCCCCCCHHHHHHHHHHHHHHh-----------h-ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEEEEEecC
Confidence 3678899999999998885211 0 12233344444444444433 334444445 35667765521
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+...++.++++ +||.+.|+. .+++||++ ..+++++++++++|+++++++
T Consensus 345 --------------~~~~~~~~l~~-~Gv~v~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 345 --------------PAAEIVKKALE-KGLLINVTG-------DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred --------------cHHHHHHHHHH-CCeEEeecC-------CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 13445556554 599999853 23899987 488999999999999988764
No 121
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.98 E-value=1.7e-30 Score=267.70 Aligned_cols=322 Identities=15% Similarity=0.153 Sum_probs=217.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc---CCCC-
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---SEND- 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~~gd- 216 (533)
++++++++.+++.+...... .| ..+....+++.+.+.. ..++|++++|+++|++.+++++.. .+||
T Consensus 49 ~p~v~~a~~~~~~~~~~~~~-~~-----~~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~ 118 (389)
T PRK01278 49 HPHLVEALKEQAEKLWHVSN-LY-----RIPEQERLAERLVENS----FADKVFFTNSGAEAVECAIKTARRYHYGKGHP 118 (389)
T ss_pred CHHHHHHHHHHHHhcCcccc-cc-----CChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 68999999999876321111 11 2233444555554432 246899999999999999998731 3555
Q ss_pred ---eEEEcCCcCcchHHHHHHhCCeEEEEecC-C-CCCCC----CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc-cC
Q 009517 217 ---GILCPIPQYPLYSASIALHGGTLVPYYLD-E-ATGWG----LETSEVKKQLEAAKAKGITVRALVVINPGNPTG-QV 286 (533)
Q Consensus 217 ---~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~-~-~~~~~----ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG-~~ 286 (533)
+|++.++.|+++...+...+......... + ..++. .|++.+++.+++ ++++|+++.++||+| .+
T Consensus 119 ~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~avivep~~~~~G~~~ 192 (389)
T PRK01278 119 ERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP------NTAAILIEPIQGEGGIRP 192 (389)
T ss_pred CCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC------CeEEEEEecccCCCCCcC
Confidence 89999999999987776665443222110 0 11222 589999999875 799999998899999 78
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++.+.+++|+++|++||+++|+||+|+++.+.|. ...... ..+ .+| +.||||.+ + +|+|+||+++
T Consensus 193 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~--~~~---~pd-----i~t~sK~l-~-~G~~ig~~~~- 257 (389)
T PRK01278 193 APDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK--LFAHEW--AGV---TPD-----IMAVAKGI-G-GGFPLGACLA- 257 (389)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--ceeecc--cCC---CCC-----EEEEehhc-c-CCcceEEEEE-
Confidence 9999999999999999999999999999876553 111111 122 456 56899999 5 7999999998
Q ss_pred cCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CceEecC
Q 009517 367 GFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE-GITCNKA 444 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~ 444 (533)
++++++.+..... .+++.++++|+++.++|+... -+.+.++++++.+.++++.+.+.+ +.+ -+..+++
T Consensus 258 --~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-----~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~~~~v~g 327 (389)
T PRK01278 258 --TEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL-----APGFLDNVQRMGLYLKQKLEGLVD---RFPDVIEEVRG 327 (389)
T ss_pred --cHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHHh---hCCCceeeEec
Confidence 8888888765543 677899999999988774210 001223333344444444333322 233 2444566
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
. |+++|+.+.. +...++.++++ +||.+.|+. .+++||++. .++++|++++++|++
T Consensus 328 ~-G~~~~i~~~~--------------~~~~~~~~l~~-~GV~~~p~~-------~~~lR~~p~~~~~~~~i~~~l~~l~~ 384 (389)
T PRK01278 328 K-GLLLGLKCVV--------------PNRDLVQALRD-EGLLTVGAG-------DNVVRLLPPLIITEEEIDEALERLER 384 (389)
T ss_pred c-cEEEEEEEec--------------CHHHHHHHHHH-CCeEEeecC-------CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 4 4556654431 13455556555 599999862 238999974 889999999999999
Q ss_pred HHHH
Q 009517 523 FHKN 526 (533)
Q Consensus 523 ~l~~ 526 (533)
++++
T Consensus 385 ~l~~ 388 (389)
T PRK01278 385 AAES 388 (389)
T ss_pred HHHh
Confidence 8865
No 122
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=4.3e-29 Score=257.27 Aligned_cols=327 Identities=16% Similarity=0.168 Sum_probs=235.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++.+++++.+++.+... ....|.+..|..++++++++++.+.+|. ++.|++++| ++++..++..++ ++||.|++
T Consensus 49 ~~~~~~a~~~~~~~~~~-~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~~a~~~a~~~~~-~~gd~vi~ 122 (385)
T TIGR01825 49 HPRLKEAAAQAIQQYGV-GAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-FNTNQGVLSALL-RKGDIVLS 122 (385)
T ss_pred CHHHHHHHHHHHHHcCC-CCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-HHHHHHHHHHhC-CCCCEEEE
Confidence 68888888888875322 2456888899999999999999987773 356777777 567778888887 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|..+...+...|.++..++ .+|++++++.+++.. .+++++|++++++||||.+.+ +++|+++|+
T Consensus 123 ~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~tG~~~~---~~~i~~l~~ 190 (385)
T TIGR01825 123 DELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENP--SYGKKLIVTDGVFSMDGDVAP---LPEIVELAE 190 (385)
T ss_pred EccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhc--cCCCeEEEEecCCcCCCCccC---HHHHHHHHH
Confidence 99999999888888888876653 578999998887531 125788888889999999988 889999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|..+.+..... .....+ .+ .+ ..++++.||||++ |++| ||+++ ++++++.+....
T Consensus 191 ~~~~~li~De~~~~~~~~~~~~-~~~~~~--~~---~~-~~~i~~~s~sK~~-~~~g---G~~~~---~~~~~~~~~~~~ 256 (385)
T TIGR01825 191 RYGAVTYVDDAHGSGVMGEAGR-GTVHHF--GL---ED-KVDIQVGTLSKAI-GVVG---GYAAG---HKELIEYLKNRA 256 (385)
T ss_pred HhCCEEEEECcccccCcCCCCC-ccHhhc--CC---Cc-CCcEEEEeccHHh-hcCC---CEEec---CHHHHHHHHHhC
Confidence 9999999999998766532111 111111 11 22 3578899999998 5555 99987 888988887653
Q ss_pred h--c-cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCC
Q 009517 381 S--V-NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLP 457 (533)
Q Consensus 381 ~--~-~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~ 457 (533)
. . +...++..+.++.++++.. ....+..+++.++++++.+.|+++ |+++..+++.++.+. +..+
T Consensus 257 ~~~~~~~~~~~~~~~a~~~al~~~-----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-~~~~ 323 (385)
T TIGR01825 257 RPFLFSTAQPPAVVAALAAAVDEL-----------QRSPELMERLWDNTRFFKAGLGKL-GYDTGGSETPITPVV-IGDE 323 (385)
T ss_pred ccccccCCCCHHHHHHHHHHHHHH-----------hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEEE-ECCH
Confidence 2 1 1234566677776666311 111235566778899999999988 888887777654432 2211
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-CCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 458 EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-VPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
. +...++..+++ +||.+. +..|+. ..+..+||+++. +++++|++++++|++++++
T Consensus 324 ~------------~~~~~~~~L~~-~gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 324 K------------AAQEFSRRLFD-EGIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred H------------HHHHHHHHHHH-CCcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 0 13445556655 499884 455542 335568999884 8999999999999998864
No 123
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=1.2e-29 Score=260.77 Aligned_cols=315 Identities=15% Similarity=0.183 Sum_probs=217.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--C----C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--S----E 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~----~ 214 (533)
++.+.+++.+++.+... ....|++. -..+|.++++++ +| .+++++++|+++++..+++.+.. . +
T Consensus 45 ~p~v~~a~~~~~~~~~~-~~~~~~~~-~~~~l~~~la~~----~g----~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~ 114 (379)
T TIGR00707 45 HPKLVEALKEQLEKLVH-VSNLYYTE-PQEELAEKLVEH----SG----ADRVFFCNSGAEANEAALKLARKYTGDKGKE 114 (379)
T ss_pred CHHHHHHHHHHHhhccc-cccccCCH-HHHHHHHHHHhh----CC----CCEEEEeCCcHHHHHHHHHHHHHHhhccCCC
Confidence 58899999888876322 11234322 144455555544 44 35999999999999999986621 1 3
Q ss_pred CCeEEEcCCcCcchHHHHHHhCCeEEE----EecCCCCCCCC--CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-C
Q 009517 215 NDGILCPIPQYPLYSASIALHGGTLVP----YYLDEATGWGL--ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-L 287 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~~~~g~~~~~----v~~~~~~~~~l--d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~ 287 (533)
+++|++++|+|+++...+...+..... .++..+..+.. |++.+++.+++ ++++|++++++||+|.. +
T Consensus 115 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~~~p~~~~~g~~~~ 188 (379)
T TIGR00707 115 KKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD------ETAAVIVEPIQGEGGVNPA 188 (379)
T ss_pred CCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh------CeeEEEEEccccCCCCccC
Confidence 699999999999988777766654321 22222111111 89999999876 78999997778888874 7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+.+++++|.++|+++++++|+||+|.+|.+.+. ..++.. ..+ .++ +.+|||.+ + +|+|+||+++
T Consensus 189 ~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~--~~~~~~--~~~---~~d-----~~t~sK~~-~-~G~riG~~~~-- 252 (379)
T TIGR00707 189 SAEFLKALREICKDKDALLIFDEVQTGIGRTGK--FFAYEH--YGI---EPD-----IITLAKGL-G-GGVPIGATLA-- 252 (379)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhhHHh--cCC---CCC-----EEEEcccc-c-CCcccEEEEE--
Confidence 999999999999999999999999998766442 111111 112 344 33789999 6 8999999998
Q ss_pred CCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEec
Q 009517 368 FSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNK 443 (533)
Q Consensus 368 ~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~ 443 (533)
++++++.+..... .+++.++++|.++.++|+. .+ ...+.++++++++.+++.|+++ .++..+.
T Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~-----------~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (379)
T TIGR00707 253 -KEEVAEAFTPGDHGSTFGGNPLACAAALAVLEV-----------IE-KERLLENVKEKGDYFKERLEELGKNYPNKEVR 319 (379)
T ss_pred -cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH-----------HH-hhhHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence 8999988876533 5677899999999888741 11 1235566777777777777664 1232233
Q ss_pred CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 444 AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 444 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
+ .|.++|+.++. +...+. +.|.++||.+.|+. .+++||++. .+++++++++++|+
T Consensus 320 ~-~g~~~~~~~~~--------------~~~~~~-~~l~~~Gv~v~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 320 G-KGLMLGIELEA--------------PCKDIV-KKALEKGLLVNCAG-------PKVLRFLPPLIITKEEIDEAVSALE 376 (379)
T ss_pred c-CceEEEEEecC--------------cHHHHH-HHHHHCCcEEeeCC-------CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 3 45567755431 123333 45677899999842 238999974 78999999999998
Q ss_pred HH
Q 009517 522 DF 523 (533)
Q Consensus 522 ~~ 523 (533)
++
T Consensus 377 ~~ 378 (379)
T TIGR00707 377 EA 378 (379)
T ss_pred Hh
Confidence 75
No 124
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=2.5e-29 Score=259.82 Aligned_cols=323 Identities=13% Similarity=0.114 Sum_probs=222.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vl 219 (533)
++.+.+++.+++.+... ....|.+..+ .+|.+.++++ ++. ..+++|++++|+++|+..+++.++ .+| ++|+
T Consensus 61 ~p~v~~ai~~~~~~~~~-~~~~~~~~~~-~~la~~l~~~----~~~-~~~~~v~~~~sgsea~~~al~~~~-~~g~~~ii 132 (398)
T PRK03244 61 HPAVVEAVTRQLATLGH-VSNLFATEPQ-IALAERLVEL----LGA-PEGGRVFFCNSGAEANEAAFKLAR-LTGRTKIV 132 (398)
T ss_pred CHHHHHHHHHHHHhccC-ccCccCCHHH-HHHHHHHHHh----CCC-CCCCEEEEeCchHHHHHHHHHHHH-HHCCCeEE
Confidence 58899999998886432 1234655442 3455555444 442 235799999999999999999887 466 5788
Q ss_pred EcCCcCcchHHHHHHh-CCeEEEEecCCC-CCC----CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH-H
Q 009517 220 CPIPQYPLYSASIALH-GGTLVPYYLDEA-TGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN-Q 292 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~-g~~~~~v~~~~~-~~~----~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~-l 292 (533)
..+++|+++....... |......+.... .++ ..|++.+++.+++ ++++|+++.++||||.++++++ +
T Consensus 133 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l 206 (398)
T PRK03244 133 AAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYL 206 (398)
T ss_pred EECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHH
Confidence 8888999886554433 221111110000 000 1378999988854 7899999999999999886554 9
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
++|.++|++||+++|+||+|++|.+.|. ...+ . ..++ .+| +.+|||++ | +|+|+||+++ ++++
T Consensus 207 ~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~~~-~-~~~~---~pD-----i~t~sK~l-~-~G~~ig~~~~---~~~~ 269 (398)
T PRK03244 207 AAAREITDRHGALLVLDEVQTGIGRTGA--WFAH-Q-HDGV---TPD-----VVTLAKGL-G-GGLPIGACLA---FGPA 269 (398)
T ss_pred HHHHHHHHHcCCEEEEeccccCCcccch--HHhh-h-hhCC---CCC-----EEEEchhh-h-CCcccEEEEE---cHHH
Confidence 9999999999999999999999766542 1111 1 1122 466 45889999 5 7999999998 8888
Q ss_pred HHHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCceEecCCceeE
Q 009517 373 REQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL--EGITCNKAEGAMY 449 (533)
Q Consensus 373 ~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g~~~~~~~gg~~ 449 (533)
++.+.... ..+++.++++++++.++|+. .+ .+...++++++++++++.|+++ +.+..+++ .|++
T Consensus 270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~-----------~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~ 336 (398)
T PRK03244 270 ADLLTPGLHGSTFGGNPVACAAALAVLDT-----------IA-SEGLLENAERLGEQLRAGIEALGHPLVDHVRG-RGLL 336 (398)
T ss_pred HhhccCCCCcCCCCCCHHHHHHHHHHHHH-----------HH-hccHHHHHHHHHHHHHHHHHhcCCCceeeEee-ccEE
Confidence 88876543 36788999999999988741 11 1245566777788899999886 22233444 4567
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+|+.++.+ ....+. ..|.++||.+.|. +.+.||+++. .++++|++++++|++++++.
T Consensus 337 ~~i~~~~~-------------~~~~~~-~~l~~~Gv~~~~~-------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 337 LGIVLTAP-------------VAKAVE-AAAREAGFLVNAV-------APDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred EEEEEecc-------------HHHHHH-HHHHHCCeEEeec-------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 77655311 122333 4456689999873 1238999985 78899999999999999865
Q ss_pred H
Q 009517 528 M 528 (533)
Q Consensus 528 ~ 528 (533)
.
T Consensus 396 ~ 396 (398)
T PRK03244 396 A 396 (398)
T ss_pred c
Confidence 4
No 125
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1e-29 Score=248.01 Aligned_cols=362 Identities=15% Similarity=0.121 Sum_probs=256.4
Q ss_pred cccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHH
Q 009517 70 YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAW 149 (533)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~ 149 (533)
|.+....+.+.++...|+.+|++ +|||..|.--. ..+++ +|.+++++.
T Consensus 21 Y~~~~~~~~~G~G~~v~D~~G~~------YlDf~~Giav~----------------------~lGH~----hP~iv~al~ 68 (404)
T COG4992 21 YGRLPVVIVRGEGAYVWDQQGRE------YLDFAAGIAVN----------------------NLGHC----HPALVEALK 68 (404)
T ss_pred cCcCceeEEeccccEEECCCCCE------eeeeccceeee----------------------ccCCC----CHHHHHHHH
Confidence 44444467777888888888888 66665443221 11222 689999999
Q ss_pred HHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC----CCeEEEcCCcC
Q 009517 150 QILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE----NDGILCPIPQY 225 (533)
Q Consensus 150 ~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~----gd~Vlv~~p~~ 225 (533)
+++.+....++..|. +.+.++++.+.+..+ ..++|+++|+++||++.+++..++.. ..+|+....+|
T Consensus 69 ~Q~~kl~h~sn~~~~------~~~~~la~~L~~~s~---~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsF 139 (404)
T COG4992 69 EQAEKLWHVSNLFYN------EPQAELAEKLVELSP---FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSF 139 (404)
T ss_pred HHHHHhhhcccccCC------hHHHHHHHHHHhhCc---cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCc
Confidence 998875442333333 334445555554311 37899999999999999999986211 24799999999
Q ss_pred cchHHHHHHhCCeEEEE----ecCCCCCCC----CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC-CHHHHHHHH
Q 009517 226 PLYSASIALHGGTLVPY----YLDEATGWG----LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIV 296 (533)
Q Consensus 226 ~~~~~~~~~~g~~~~~v----~~~~~~~~~----ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~-s~~~l~~i~ 296 (533)
++-......++.+..+. |+.+ +|. =|+++++++|++ +|.+|+++..+...|+++ +++.++++.
T Consensus 140 HGRT~galS~t~~~ky~~~F~Pl~~--g~~~vpfnDi~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr 211 (404)
T COG4992 140 HGRTLGALSATGQPKYRKGFGPLLP--GFRHVPFNDIEALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALR 211 (404)
T ss_pred CCccceeeeccCChhhccCCCCCCC--CceecCCCCHHHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHH
Confidence 98665444444332111 1111 111 189999999998 899999999999999854 556699999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|.||+++++..+|. -++.+..++.|| |.++.|.++ .|++||++++ ...+.+.+
T Consensus 212 ~lCd~~g~LLI~DEVQtG~GRTGk-------~fA~e~~gV~PD-----I~tlaK~Lg--GG~PigA~la---~~~~~~~~ 274 (404)
T COG4992 212 ELCDEHGALLILDEVQTGLGRTGK-------LFAYEHYGVEPD-----ILTLAKALG--GGFPIGAMLA---TEEIASAF 274 (404)
T ss_pred HHHHHhCeEEEEeccccCCCccch-------HHHHHHhCCCCC-----EEEeecccc--CCccceeeEE---chhhhhcC
Confidence 999999999999999999988875 334444455799 678899995 4899999998 66667666
Q ss_pred HHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCceeEEe
Q 009517 377 YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEGAMYLF 451 (533)
Q Consensus 377 ~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~gg~~~~ 451 (533)
....+ +|+++|+++++++.++|+.. . .+.+.++.+++.+++.+.|+++ |-++-++..|-|.-
T Consensus 275 ~~G~HgSTfGGNpLacAv~~a~l~~l-----------~-~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiG- 341 (404)
T COG4992 275 TPGDHGSTFGGNPLACAVALAVLEVL-----------L-EEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIG- 341 (404)
T ss_pred CCCcccCCCCcCHHHHHHHHHHHHHH-----------c-chhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEE-
Confidence 66555 88999999999999988521 1 2456667777888888888776 33566777775433
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+.+... . ....++ +.+.++||++.+ .+.+.+|+.+. +++++|++++++|+++++.+..
T Consensus 342 --iel~~~---------~-~a~~~~-~~~~~~gvL~~~-------a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 342 --IELKEP---------Y-RARDIV-RALREEGVLVLP-------AGPNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred --EEecCc---------c-cHHHHH-HHHHHCCeEEec-------CCCCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 332211 0 123333 556778999995 55559999995 8999999999999999998764
Q ss_pred H
Q 009517 530 K 530 (533)
Q Consensus 530 ~ 530 (533)
.
T Consensus 402 ~ 402 (404)
T COG4992 402 R 402 (404)
T ss_pred c
Confidence 3
No 126
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=3.8e-28 Score=250.27 Aligned_cols=326 Identities=14% Similarity=0.119 Sum_probs=222.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+++..... ....|....|..++++.+++.+.+.++ .++.++++++++++..+++.+. ++||+|++
T Consensus 55 ~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~~----~~~~i~~~~g~~~~~~~l~~~~-~~gd~V~~ 128 (385)
T PRK05958 55 HPRLIAAAQQAARRYGA-GSGGSRLVTGNSPAHEALEEELAEWFG----AERALLFSSGYAANLAVLTALA-GKGDLIVS 128 (385)
T ss_pred CHHHHHHHHHHHHhcCC-CCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECcHHHHHHHHHHHhC-CCCCEEEE
Confidence 68899999888875321 122334444444445555555544444 2344555556677777778877 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|+.+...+...|.+++.++. .|++.+++.+++. .++++++++.+++||||...+ +++|+++|+
T Consensus 129 ~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~---~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~ 195 (385)
T PRK05958 129 DKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKW---RAGRALIVTESVFSMDGDLAP---LAELVALAR 195 (385)
T ss_pred eCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhc---cCCCeEEEEEecccCCCCcCC---HHHHHHHHH
Confidence 999999999999989999888764 3789999988752 113555666688999998877 899999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|..+.+..... .... ...+ ....++|++.||||++ |++| ||+++ ++++++.+.+..
T Consensus 196 ~~~~~li~De~~~~g~~~~~g~--~~~~-~~~~---~~~~~~i~~~s~sK~~-~~~G---g~~~~---~~~~~~~~~~~~ 262 (385)
T PRK05958 196 RHGAWLLVDEAHGTGVLGPQGR--GLAA-EAGL---AGEPDVILVGTLGKAL-GSSG---AAVLG---SETLIDYLINRA 262 (385)
T ss_pred HhCCEEEEECcccccccCCCCC--chHH-hhCC---CCCCceEEEEechhhc-ccCC---cEEEc---CHHHHHHHHHhC
Confidence 9999999999997654532111 1111 1112 2233579999999998 6666 89887 888888775443
Q ss_pred h---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCC
Q 009517 381 S---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLP 457 (533)
Q Consensus 381 ~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~ 457 (533)
. .+.++++..+.++.++|+. .+..+.+.+++.++++++.+.|+++ |++++.+.++++ |+.++
T Consensus 263 ~~~~~~~~~~~~~~aa~~aal~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~-~~~~~-- 327 (385)
T PRK05958 263 RPFIFTTALPPAQAAAARAALRI-----------LRREPERRERLAALIARLRAGLRAL-GFQLMDSQSAIQ-PLIVG-- 327 (385)
T ss_pred ccceecCCCCHHHHHHHHHHHHH-----------HhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEE-EEEeC--
Confidence 2 2234556666666566531 1111456778899999999999987 788777777654 54443
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 458 EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
... +...++..+ .++||.+.++..+....+.++|||++. .+++++++++++|++++
T Consensus 328 ~~~----------~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 328 DNE----------RALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred CHH----------HHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 110 133445454 567999998655432334569999996 78999999999998753
No 127
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=4.3e-28 Score=250.73 Aligned_cols=324 Identities=17% Similarity=0.155 Sum_probs=228.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCC-------cccHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHhc-
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHS-------QGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLLI- 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~-------~G~~~lr~aia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l~- 211 (533)
|..+++++.+.+..... ...+... ..+.++|++++++++ . ++++|++|+|+++++..++..+.
T Consensus 29 p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~t~g~t~~l~~~~~~~~~ 100 (398)
T TIGR03392 29 PQAVIDATQQFYRLSSG--TVHRSQHQQAQSLTARYELARQQVARFLN------APDAENIVWTRGTTESINLVAQSYAR 100 (398)
T ss_pred CHHHHHHHHHHHHhcCC--CCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCChHHHHHHHHHHhhh
Confidence 78899998887754322 1122221 235678888888875 3 46899999999999999999872
Q ss_pred --cCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 212 --RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 212 --~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
.++||+|++++|.|+. +...++..|++++.++++. ++.+|++.+++++++ ++++|++++|+||||.
T Consensus 101 ~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~ 172 (398)
T TIGR03392 101 PRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTP------RTRILALGQMSNVTGG 172 (398)
T ss_pred ccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhcc------CceEEEEECccccccc
Confidence 2689999999999876 4456677899999999864 357899999999976 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+.+ +++|+++|+++|+++|+|++|....+ + .++ ..+ ..| +++.|++|.+ |++| +||+++
T Consensus 173 ~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~-~~~----~~~---~~d---~~~~s~~K~~-gp~G--~G~l~~ 231 (398)
T TIGR03392 173 CPD---LARAITLAHQYGAVVVVDGAQGVVHG----P-PDV----QAL---DID---FYAFSGHKLY-GPTG--IGVLYG 231 (398)
T ss_pred cCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----C-CCh----hhc---CCC---EEEEeccccc-CCCc--eEEEEE
Confidence 998 88899999999999999999965322 1 121 111 233 6678888977 7666 899987
Q ss_pred ecCCHHHHHHHHHhhh----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHH
Q 009517 366 TGFSAEVREQIYKVAS----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (533)
Q Consensus 366 ~~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (533)
++++++.+..... ...+++..+..++.++++- +.. ...+.+.++..
T Consensus 232 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~-------l~~--~g~~~i~~~~~ 299 (398)
T TIGR03392 232 ---KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEW-------LTD--IDIAAAEAWSV 299 (398)
T ss_pred ---cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHH-------HHH--hCHHHHHHHHH
Confidence 8888776643210 0123444455555555420 000 11345667778
Q ss_pred HHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-----CC
Q 009517 424 RRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-----PG 498 (533)
Q Consensus 424 ~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-----~g 498 (533)
+.++++.+.|++++|+....+..+..+++.++ . . +...+. ..|.++||.+.+|..+... ..
T Consensus 300 ~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~--~----------~-~~~~l~-~~L~~~gI~v~~g~~~~~~~~~~~g~ 365 (398)
T TIGR03392 300 SLADLAEERLAQLPGFRSFRCPGSSLLAFDFA--G----------V-HHSDLA-ALLAESGIALRAGQHCAQPLMAALGV 365 (398)
T ss_pred HHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeC--C----------c-CHHHHH-HHHHhCCEEEecCccchHHHHHHhCC
Confidence 88889999999888888765433334443332 1 1 123333 4567789999999866311 11
Q ss_pred CceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 499 ~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
.++||+|+. .+++|++++++.|+++++++
T Consensus 366 ~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 366 SGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred CCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 248999996 88999999999999887753
No 128
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=4.9e-28 Score=250.58 Aligned_cols=325 Identities=18% Similarity=0.179 Sum_probs=229.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC------CcccHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHhc--
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH------SQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLLI-- 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l~-- 211 (533)
|..+++++.+.+...... ...... ...+.++|++++++++ . ++++|++|+|+++++..+++.+.
T Consensus 32 ~~~v~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~~~~~t~~i~~~~~~~~~~ 104 (401)
T PRK10874 32 PQAVIEATQQFYSLSAGN-VHRSQFAAAQRLTARYEAAREQVAQLLN------APDAKNIVWTRGTTESINLVAQSYARP 104 (401)
T ss_pred CHHHHHHHHHHHHhccCC-CCCcccHHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCHHHHHHHHHHHhhhc
Confidence 788999888887653210 111111 1225678888888875 4 67899999999999999999973
Q ss_pred -cCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 212 -RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 212 -~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
.++||+|++++|.|+. +...++..|++++.++.+. ++.+|++++++.+++ ++++|++++|+||||.+
T Consensus 105 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~ 176 (401)
T PRK10874 105 RLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITP------RTRILALGQMSNVTGGC 176 (401)
T ss_pred cCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCc------CcEEEEEeCCcccccCc
Confidence 2589999999999865 4556677899999999864 467899999999976 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++ +++|+++|+++|+++|+|++|....+ + .++ ..+ ..| +++.|++|.+ |++| +||+++
T Consensus 177 ~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~-~~~----~~~---~~d---~~~~s~~K~~-gp~G--~G~l~~- 234 (401)
T PRK10874 177 PD---LARAITLAHQAGMVVMVDGAQGAVHF----P-ADV----QAL---DID---FYAFSGHKLY-GPTG--IGVLYG- 234 (401)
T ss_pred CC---HHHHHHHHHHcCCEEEEECCcccccc----c-CCc----hhc---CCC---EEEEeccccc-CCCc--cEEEEE-
Confidence 98 88999999999999999999964222 1 111 111 233 6788999976 7777 488887
Q ss_pred cCCHHHHHHHHHhhh----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHH
Q 009517 367 GFSAEVREQIYKVAS----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (533)
++++++.+..... ...+++..++.++..+++. +.. .....+.++.++
T Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~-------l~~--~g~~~~~~~~~~ 303 (401)
T PRK10874 235 --KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEW-------LAD--IDINQAESWSRS 303 (401)
T ss_pred --chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHH-------HHH--hCHHHHHHHHHH
Confidence 8888776643210 1124455566666665531 100 113445677778
Q ss_pred HHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-----CCC
Q 009517 425 RAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-----PGT 499 (533)
Q Consensus 425 ~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-----~g~ 499 (533)
.++++.+.|+++||+....+..+.++++.++ . . +...+. ..|.++||.+.+|..+... ...
T Consensus 304 l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~--~----------~-~~~~~~-~~L~~~gI~v~~g~~~~~~~~~~~g~~ 369 (401)
T PRK10874 304 LATLAEDALAKLPGFRSFRCQDSSLLAFDFA--G----------V-HHSDLV-TLLAEYGIALRAGQHCAQPLLAALGVT 369 (401)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCcEEEEEEC--C----------c-CHHHHH-HHHHHCCcEEeccccchHHHHHHhCCC
Confidence 8899999999988988775444434443333 1 1 123333 5667789999998876411 112
Q ss_pred ceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 500 WHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 500 ~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
++||||+. .++++++.+++.|+++++.+
T Consensus 370 ~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 370 GTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred CEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 48999996 78999999999999887753
No 129
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.97 E-value=1.3e-28 Score=254.01 Aligned_cols=343 Identities=12% Similarity=0.114 Sum_probs=232.9
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
+..++++...++.+|++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 25 ~~~~~~G~~l~d~~G~~------~lD~~~g~~~~----------------------~lGh~----~p~v~~ai~~~~~~~ 72 (396)
T PRK04073 25 VISEAEGVWVKDPEGNR------YMDMLSAYSAV----------------------NQGHR----HPKIIQALKDQADKV 72 (396)
T ss_pred eEEeeeecEEEECCCCE------EEEcCCCHHhc----------------------cCCCC----CHHHHHHHHHHHhhc
Confidence 45566666666667777 78876554321 11111 689999999998864
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC--------CC-CeEEEcCCcCc
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS--------EN-DGILCPIPQYP 226 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--------~g-d~Vlv~~p~~~ 226 (533)
.. ...+.......+|.+.++++ .+ .+.++++++|++|++.+++.++.. +| ++|+....+|+
T Consensus 73 ~~--~~~~~~~~~~~~l~~~l~~~----~~----~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~H 142 (396)
T PRK04073 73 TL--TSRAFHSDQLGPWYEKVAKL----TG----KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFH 142 (396)
T ss_pred cc--cccccCCHHHHHHHHHHHhc----CC----CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcC
Confidence 32 11111222233444444443 22 468999999999999999987421 34 67898888888
Q ss_pred chHHHH-HHhCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH-HHH
Q 009517 227 LYSASI-ALHGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE-ENQ 292 (533)
Q Consensus 227 ~~~~~~-~~~g~~------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~-~~l 292 (533)
+..... ...+.. +..++. .|++.+++.+++ ++++|++++++||||.++++ +.+
T Consensus 143 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l 209 (396)
T PRK04073 143 GRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFL 209 (396)
T ss_pred CCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHH
Confidence 865333 222311 111111 278999988865 78899999999999998775 469
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
++|.++|++||+++|+||+|.++.++|. ... .+..+..+| +.+|||.+ |++|+|+||+++ ++++
T Consensus 210 ~~l~~l~~~~g~lli~DEv~~g~g~~g~--~~~-----~~~~~~~pd-----i~~~sK~l-g~gg~~ig~~~~---~~~i 273 (396)
T PRK04073 210 KAARELCKEENVLFIADEIQTGLGRTGK--LFA-----CDWDNVTPD-----MYILGKAL-GGGVFPISCVAA---NRDI 273 (396)
T ss_pred HHHHHHHHHcCCEEEEecchhCCCcCcH--HHH-----hhhcCCCCC-----EEEecccc-cCCCCcceEEEE---cHHH
Confidence 9999999999999999999999766542 111 111111455 45689999 777899999998 9999
Q ss_pred HHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCceEecCCceeE
Q 009517 373 REQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL--EGITCNKAEGAMY 449 (533)
Q Consensus 373 ~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g~~~~~~~gg~~ 449 (533)
++.+..... .++++++++++++.++|+. .++ +.+.++.+++++++.+.|+++ +++..+++.|.|
T Consensus 274 ~~~~~~~~~~~t~~~~~~~~aaa~aaL~~-----------~~~-~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~- 340 (396)
T PRK04073 274 LGVFTPGSHGSTFGGNPLACAVSIAALEV-----------LEE-EKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLF- 340 (396)
T ss_pred HhhhcCCCCCCCCCCCHHHHHHHHHHHHH-----------HHh-cCHHHHHHHHHHHHHHHHHhhcCCcccceecceEE-
Confidence 988865433 6788899999999888841 111 234466677788888988876 345556677654
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l 524 (533)
+++++. . ....++.+ |.++||.+.+. +.++|||++ ..++++|++++++|++++
T Consensus 341 ~~~~~~--~------------~~~~~~~~-l~~~Gv~~~~~-------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 341 IGVELN--E------------PARPYCEA-LKEEGLLCKET-------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEEEec--c------------hHHHHHHH-HHHCCeEEecC-------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 555443 1 13344444 55689999862 223899996 489999999999998875
No 130
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=3.4e-28 Score=245.46 Aligned_cols=312 Identities=15% Similarity=0.123 Sum_probs=213.7
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
+++.+++++.+.... ...|.|..+..+|++++|++++ .+.+++++|+++++..++.+++ .+||+|+
T Consensus 12 p~~~~~~a~~~~~~~-----~~~Y~~~~~~~~L~~~la~~~g--------~~~~~v~~~g~~a~~~~l~~~~-~~gd~vi 77 (333)
T PRK10534 12 PSRAMLEAMMAAPVG-----DDVYGDDPTVNALQDYAAELSG--------KEAALFLPTGTQANLVALLSHC-ERGEEYI 77 (333)
T ss_pred CCHHHHHHHHhccCC-----CcccCCCHHHHHHHHHHHHHhC--------CCeEEEeCchHHHHHHHHHHhc-CCCCeeE
Confidence 477888887654432 4578777779999999999974 2455788888888888888887 7999999
Q ss_pred EcCCcCcc-hHHH-HHHhC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 220 CPIPQYPL-YSAS-IALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 220 v~~p~~~~-~~~~-~~~~g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
++.|+|.. |... ....| ++++.++.+ .+|.+|+++|++++++......++++|+++||+ ||.+++.+++++|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~ 153 (333)
T PRK10534 78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAW 153 (333)
T ss_pred EechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHH
Confidence 99888753 4321 23444 677777765 368999999999886411111147899999766 59999999999999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE-EEEEecCCHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG-YMEVTGFSAEVREQ 375 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG-~v~~~~~~~~~~~~ 375 (533)
++|++|++++|+||+|........ ..+...+ .. ..+ .+ +.||||.+ |+ ++| |+++ ++++++.
T Consensus 154 ~~~~~~~~~lvvDEA~~~~~~~~~--~~~~~~~-~~----~~~-~~--~~s~SK~~-~~---~~G~~~~~---~~~~i~~ 216 (333)
T PRK10534 154 EFTRERNLALHVDGARIFNAVVAY--GCELKEI-TQ----YCD-SF--TICLSKGL-GT---PVGSLLVG---NRDYIKR 216 (333)
T ss_pred HHHHHcCCeEEeeHHHHHHHHHHc--CCCHHHH-Hh----cCC-EE--EEEeEcCC-CC---cccceEEc---CHHHHHH
Confidence 999999999999999862111000 0112122 11 123 22 34899987 54 478 5766 9999999
Q ss_pred HHHhhhcc-c--cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEec
Q 009517 376 IYKVASVN-L--CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452 (533)
Q Consensus 376 l~~~~~~~-~--~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~ 452 (533)
+.+....+ . ..+.+.+.++...|++ . ....++..+.++++.+.|+++ |+.+.+| +++|+|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~----------~----~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~ 280 (333)
T PRK10534 217 ARRWRKMTGGGMRQAGILAAAGLYALKH----------N----VARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFV 280 (333)
T ss_pred HHHHHHHhCCchhhHHHHHHHHHHHHHh----------h----HHHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEE
Confidence 98776522 1 2233455555555421 1 122223445678999999998 9988877 4778887
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
+++. . .... +.++|.++||.++||. ++|++.. ++.+++++++++|++++.
T Consensus 281 ~~~~-~------------~~~~-~~~~l~~~gi~v~~~~---------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 281 RVGE-E------------QAAA-LGEYMRERNVLINASP---------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ECCc-h------------hHHH-HHHHHHHcCeeecCCc---------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 6541 0 1233 3477888999999852 5788774 889999999999987764
No 131
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=3.1e-27 Score=240.20 Aligned_cols=323 Identities=17% Similarity=0.186 Sum_probs=218.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCccc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
|+++++++.+.+.+... ....|....|. .++++++++++ |. +.+++++++++++..+++.++ ++||
T Consensus 17 ~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~----~~----~~~iv~~sg~~a~~~~~~~~~-~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALDKYGV-GAGGSRLISGTSDLHEELEEELAEFH----GK----EAALVFSSGYAANDGVLSTLA-GKGD 86 (349)
T ss_pred CHHHHHHHHHHHHHhCC-CCCCcCeecCCchHHHHHHHHHHHHh----CC----CCEEEeccHHHHHHHHHHHhc-CCCC
Confidence 68899999998875321 12233333333 45555555554 42 245666666788888888887 7999
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+|+++.|+|..+...+...|++++.++ .+|++.+++.+++.. ...++++|++++++||||...+ +++|+
T Consensus 87 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~ 155 (349)
T cd06454 87 LIISDSLNHASIIDGIRLSGAKKRIFK-------HNDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELV 155 (349)
T ss_pred EEEEehhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHH
Confidence 999999999999888899999988775 247888999887631 0125778888899999999877 89999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|+++|+++|+|++|....+..... .+..+ . . .....++++.|+||++ +++| ||++. ++++++.+
T Consensus 156 ~~~~~~~~~livD~a~~~g~~~~~~~--~~~~~-~-~---~~~~~~i~~~s~sK~~-~~~g---G~i~~---~~~~~~~~ 221 (349)
T cd06454 156 DLAKKYGAILFVDEAHSVGVYGPHGR--GVEEF-G-G---LTDDVDIIMGTLGKAF-GAVG---GYIAG---SKELIDYL 221 (349)
T ss_pred HHHHHcCCEEEEEccccccccCCCCC--Chhhh-c-c---ccccCcEEEeechhhh-cccC---CEEEC---CHHHHHHH
Confidence 99999999999999997433321111 11011 1 0 1233468899999998 5444 89887 88888877
Q ss_pred HHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 377 YKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 377 ~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
..... .+...++..+.++.+.|+. ..+.+.++++++++++.+.+.|.++ |+.+..+.++++.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~a~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~ 289 (349)
T cd06454 222 RSYARGFIFSTSLPPAVAAAALAALEV-----------LQGGPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLI 289 (349)
T ss_pred HHhchhhhccCCCCHHHHHHHHHHHHH-----------HhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEe
Confidence 65432 1234556666666666531 1113556788899999999999987 8777766555544432
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
+..+. +...+...+ .++||.+.++.......+.++|||++. .+++++++++++|+++
T Consensus 290 ~~~~~------------~~~~~~~~L-~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 290 GDDPA------------KAVAFSDAL-LERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCChH------------HHHHHHHHH-HhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 21111 123444454 456999998643221223459999996 6899999999999764
No 132
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.96 E-value=1.3e-28 Score=256.28 Aligned_cols=368 Identities=14% Similarity=0.093 Sum_probs=242.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ ++|+..|.+.. ..+++ ++.+++++.+++.+.
T Consensus 33 ~~~~~~G~~l~d~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~~ 80 (423)
T TIGR00713 33 FVARGKGAYLYDVDGNE------YIDYVLSWGPL----------------------ILGHA----HPRVVEAVKEALERG 80 (423)
T ss_pred eEEeccCCEEEeCCCCE------EEEcccccccc----------------------ccCCC----CHHHHHHHHHHHHhC
Confidence 55667777777777777 88888776553 11111 799999999999872
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv~~p~~~~~~~~~~~ 234 (533)
...+.+..+..+|++++++++.. .++|++++|+++|++.+++.++. ...++|+...++|+++...+..
T Consensus 81 ----~~~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~ 149 (423)
T TIGR00713 81 ----TSYGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLV 149 (423)
T ss_pred ----CcCCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhc
Confidence 22233566788999999988631 36899999999999999997652 1358999999999998654433
Q ss_pred h---CCeEEEEecCCC-------CCC---CCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCC-HHHHHHHHHHH
Q 009517 235 H---GGTLVPYYLDEA-------TGW---GLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLA-EENQRAIVDFC 299 (533)
Q Consensus 235 ~---g~~~~~v~~~~~-------~~~---~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s-~~~l~~i~~l~ 299 (533)
. +......+..+. ..+ .-|++++++.++.. +.++++|+++ .|+| +|.+++ ++.+++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~ 225 (423)
T TIGR00713 150 KAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALT 225 (423)
T ss_pred cccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHH
Confidence 1 111111111100 000 02789999998742 2368899987 7788 788777 68899999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH-
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK- 378 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~- 378 (533)
++||+++|+||+|.++.+ |. .... .. ..+ .+| +.+|||.+ + +|+|+||+++ ++++++.+..
T Consensus 226 ~~~~~llI~DEv~~g~r~-g~--~~~~-~~-~~~---~pD-----i~t~sK~l-~-~G~pig~v~~---~~~i~~~~~~~ 287 (423)
T TIGR00713 226 EEYGSLLIFDEVMTGFRV-AL--GGAQ-EY-FGV---EPD-----LTTLGKII-G-GGLPVGAFGG---RREIMERLAPE 287 (423)
T ss_pred HHhCCEEEEEcccccccc-Cc--chhH-HH-hCC---Ccc-----hhhhhhhh-c-CCCceeeeeE---HHHHHHhhCcC
Confidence 999999999999999854 32 1111 11 122 466 45899999 6 7999999998 9999988863
Q ss_pred --hh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCCceeEEe-cc
Q 009517 379 --VA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC-NKAEGAMYLF-PR 453 (533)
Q Consensus 379 --~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~gg~~~~-~~ 453 (533)
.. ..+++.++++++++.++|+..+ . ....+.+.+..+.+++.|.+.+++. ++.. +.+.|+|+.+ +.
T Consensus 288 ~~~~~~~T~~~~~~~~aaa~a~l~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~ 358 (423)
T TIGR00713 288 GPVYQAGTLSGNPLAMAAGLATLKLLD-------E-EGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFT 358 (423)
T ss_pred CCeeeccCCCCCHHHHHHHHHHHHHHh-------c-ccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEe
Confidence 22 2677899999999988885211 0 0123444555555666677777766 5433 4566666553 32
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
.+...+..+ ....+......++..++ ++||.+.++ .|+ .+||++..++++|++++++|++++++
T Consensus 359 ~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~Gv~v~~~-~~~------~~~l~~~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 359 EEEVTNYAD-AKKSDTELFAKFFHEML-DKGVFLPPS-QFE------ACFLSAAHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred cCCCCChhh-hhcccHHHHHHHHHHHH-HCCeEEecC-Ccc------ceeeECCCCHHHHHHHHHHHHHHHhh
Confidence 211000000 00000000123444444 689998753 332 57899988999999999999998865
No 133
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=6.1e-27 Score=242.60 Aligned_cols=330 Identities=13% Similarity=0.042 Sum_probs=229.4
Q ss_pred CHHHHHHHHHHHhcCC---CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIP---GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~---~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
++.|.+++.+.+.... ......|....+..++++.+++++.+.+|.+ ..+|++++ +++|+..++..++ ++||+
T Consensus 32 ~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a~~~~l~~l~-~~Gd~ 107 (402)
T cd00378 32 SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQANLAVYFALL-EPGDT 107 (402)
T ss_pred CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHHHHHHHHHhc-CCCCE
Confidence 6888888876553211 1123446667777888888888887777743 44566554 5799999999998 89999
Q ss_pred EEEcCCcCcchHHH-----HHHhCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 218 ILCPIPQYPLYSAS-----IALHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 218 Vlv~~p~~~~~~~~-----~~~~g~~~~~v~~~~~~-~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
|++++|+|..+... ++..|.++..++++.+. ++.+|++++++.++.. ++++|++++|+||+ ..+
T Consensus 108 Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~~~~v~~~~~~~~~--~~~--- 177 (402)
T cd00378 108 IMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF-----KPKLIVAGASAYPR--PID--- 177 (402)
T ss_pred EEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC-----CCCEEEecCcccCC--CcC---
Confidence 99999999876543 56678887777776542 6899999999999753 68899988998874 333
Q ss_pred HHHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 292 QRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+++|+++|+++|+++|+|++| .++.+.+..+ ..+ . ..| +++.|+||++ +|+|+||+++ ++
T Consensus 178 ~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~-~~~----~-----~~d---v~~~s~sK~l---~G~~gg~i~~---~~ 238 (402)
T cd00378 178 FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP-NPL----P-----GAD---VVTTTTHKTL---RGPRGGLILT---RK 238 (402)
T ss_pred HHHHHHHHHhcCCEEEEEccchhhhhhcccCC-Ccc----c-----CCc---EEEeccccCC---CCCCceEEEe---cc
Confidence 899999999999999999995 6655544211 111 0 123 6799999987 4899999998 55
Q ss_pred -HHHHHHHHhhh-ccccCCh-HHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCceEe-cCC
Q 009517 371 -EVREQIYKVAS-VNLCSNI-SGQILASLVMSPPKVGDESYESYCA-ERDGILSSLARRAKTLEDAFNSLEGITCN-KAE 445 (533)
Q Consensus 371 -~~~~~l~~~~~-~~~~~~~-~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~ 445 (533)
++++.+.+... ...+.+. ..+.++..++. .... ..++.+++++++++++.+.|+++ |+.+. .+.
T Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 307 (402)
T cd00378 239 GELAKKINSAVFPGLQGGPHLHVIAAKAVALK----------EALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGT 307 (402)
T ss_pred HHHHHHHHHHhCccccCCchHHHHHHHHHHHH----------HHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCC
Confidence 88888876543 2222222 22333233331 1111 34566777899999999999998 88876 467
Q ss_pred ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC---CCCCceEEEEec-C-----CcCcHHHH
Q 009517 446 GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ---VPGTWHFRCTIL-P-----QEDKIPAI 516 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---~~g~~~iRis~~-~-----~~e~i~~~ 516 (533)
+++++|++++... . +.. .+.++|+++||.+.++...+. ..+..++||++. . ++++|+++
T Consensus 308 ~~~~v~v~~~~~~----------~-~~~-~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~ 375 (402)
T cd00378 308 DNHLVLVDLRPKG----------I-TGK-AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEI 375 (402)
T ss_pred CCeEEEEeCCccC----------C-CHH-HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHH
Confidence 8999997765211 1 122 344678889999986432221 113348999994 2 58899999
Q ss_pred HHHHHHHHHH
Q 009517 517 VTRLTDFHKN 526 (533)
Q Consensus 517 ~~~l~~~l~~ 526 (533)
++.|++++++
T Consensus 376 ~~~l~~~~~~ 385 (402)
T cd00378 376 ADFIARALKD 385 (402)
T ss_pred HHHHHHHHhc
Confidence 9999987764
No 134
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=1e-26 Score=223.17 Aligned_cols=328 Identities=18% Similarity=0.250 Sum_probs=216.6
Q ss_pred Ccccc-CCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHh-cc-----------CCCCeEEEcCCc
Q 009517 159 ATGAY-SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLL-IR-----------SENDGILCPIPQ 224 (533)
Q Consensus 159 ~~~~Y-~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~~~~l-~~-----------~~gd~Vlv~~p~ 224 (533)
...+| +...|++++|+-+|+.++ +++++|++..+++ ..+..++... +. .+.-+.++|.|+
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~llg------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPG 133 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELLG------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPG 133 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHHT------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES-
T ss_pred cccCCCCccCChHHHHHHHHHHhC------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCC
Confidence 56789 899999999999999997 8899998876554 4443333322 10 112368999999
Q ss_pred CcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHH-HHHc
Q 009517 225 YPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDF-CKKE 302 (533)
Q Consensus 225 ~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l-~~~~ 302 (533)
|--|..+.+.+|.+.++||+.++ |+|.+.+++.+.+ .+.+|.|+.. ..+||||+++|.+..++++++ +...
T Consensus 134 YDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~----D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~ 206 (425)
T PF12897_consen 134 YDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAE----DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP 206 (425)
T ss_dssp -HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHT----STTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST
T ss_pred chHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhc----CCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc
Confidence 99999999999999999999987 8999999999865 3478888755 449999999999999999998 4467
Q ss_pred CCEEEEccccccccccCCCC---cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 303 GLVLLADEVYQENVYVPEKK---FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
+..|+.|++|.-..+.++.+ ..++...+.+.+ .++ +++.+.|.||.- .||-+|+++.+ +++-++.+.+.
T Consensus 207 DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG--npd-rv~~F~STSKIT--f~GaGva~~aa---S~~Nl~~~~~~ 278 (425)
T PF12897_consen 207 DFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG--NPD-RVYVFASTSKIT--FPGAGVAFFAA---SEANLAWIKKH 278 (425)
T ss_dssp T-EEEEE-TTTT-BSSSSSS------HHHHHHHTT---TT-SEEEEEESTTTS---TTSS-EEEEE----HHHHHHHHHH
T ss_pred CeEEEeecCceEeeccccccchhhhHHHHHHHHcC--CCC-eEEEEecccccc--cCCcceeeeec---CHHHHHHHHHH
Confidence 99999999998766633222 236777777764 455 789999999965 48999999998 88888888776
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCceEecCCceeEEec
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYE-SYCAERDGILSSLARRAKTLEDAFNS-----LEGITCNKAEGAMYLFP 452 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~-----~~g~~~~~~~gg~~~~~ 452 (533)
.+ .+.++.-+.|..-..++.+ .+ ....++++.++.++-+.+.+.+.|++ ....+|..|.||+|+++
T Consensus 279 ~~~~tIgpdKvNQLRHvrff~d-------~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsl 351 (425)
T PF12897_consen 279 LSVQTIGPDKVNQLRHVRFFKD-------AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISL 351 (425)
T ss_dssp HHHH-S---HHHHHHHHHHHHS-------HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEE
T ss_pred hcCceeCccHHHHHHHHHHhcC-------hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEE
Confidence 65 7789999999999999864 23 34566667777777777766666544 22368999999999996
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-CCCC--CCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-GSGF--GQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g~~f--~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~ 528 (533)
++. ++ ....+.+++++.||.++| |..| |.++....|||+++ .+.++++.+++.+.-.++-..
T Consensus 352 d~~--~G------------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~la~ 417 (425)
T PF12897_consen 352 DVL--DG------------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKLAA 417 (425)
T ss_dssp EES--TT-------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHHHH
T ss_pred ecC--CC------------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 543 22 233456889999999999 7777 44556679999998 889999999999988776543
No 135
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=4.7e-27 Score=243.72 Aligned_cols=328 Identities=16% Similarity=0.147 Sum_probs=226.3
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCC
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd 216 (533)
++.+++++.+++...... ....|+......+|++++|++++ . ++.|++++| ++++..++..+.. .+|+
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g------~-~~~i~~~sG-~~a~~~~i~~l~~~~~g~ 133 (410)
T PRK13392 62 HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG------K-ESALLFTSG-YVSNDAALSTLGKLLPGC 133 (410)
T ss_pred CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC------C-CCEEEECcH-HHHHHHHHHHHhcCCCCC
Confidence 789999998888763210 01223333236788888888874 2 355666666 5777777776641 3788
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
.|+++...|..+...+...|+++..++.+ |.+.+++.++... .+++++|++++|+||||.+++ +++|.
T Consensus 134 ~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~---l~~i~ 201 (410)
T PRK13392 134 VILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAP---IEAIC 201 (410)
T ss_pred EEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCccccc---HHHHH
Confidence 88887777777777788889887766422 5667777765421 126889999999999999998 88999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|+++|+++|+||+|....++... ..+... ..+ .+. ..+++.||||+| |++| ||+++ ++++++.+
T Consensus 202 ~l~~~~~~~livDea~~~g~~g~~g--~g~~~~-~~~---~~~-~div~~tlsK~~-g~~G---G~~~~---~~~~~~~l 267 (410)
T PRK13392 202 DLADRYNALTYVDEVHAVGLYGARG--GGIAER-DGL---MDR-IDMIQGTLAKAF-GCLG---GYIAA---SADLIDFV 267 (410)
T ss_pred HHHHHcCCEEEEECCccccCcCCCC--Cchhhh-ccC---CCC-CcEEEEEChHhh-hccc---chhhc---CHHHHHHH
Confidence 9999999999999999844443211 111111 111 111 127789999999 6777 89987 89999988
Q ss_pred HHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 377 YKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 377 ~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
.+... .+.+.+++.++++.++|+. .++....+++++++++++++.|+++ |+.+.+++++++.. .
T Consensus 268 ~~~~~~~~~s~~~~~~~~~a~~aaL~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i-~ 334 (410)
T PRK13392 268 RSFAPGFIFTTALPPAVAAGATAAIRH-----------LKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHIVPV-M 334 (410)
T ss_pred HHhCcchhccCcCCHHHHHHHHHHHHH-----------HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEE-E
Confidence 77653 2334566778877777742 1222345567888899999999998 88887788876532 1
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+..+. ....+++++++++||.+.++.....+.+..++||++. .+++++++++++|+++++++
T Consensus 335 ~~~~~------------~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 335 VGDPT------------LCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred eCCHH------------HHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 22111 1234556666778999998755443345569999994 88999999999999887653
No 136
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.96 E-value=5e-28 Score=238.66 Aligned_cols=389 Identities=15% Similarity=0.131 Sum_probs=270.7
Q ss_pred CCCCCCcccccCcCcccccCcccc-ccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCC
Q 009517 49 APTSSPAITVDSLNPKVLKCEYAV-RGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDH 127 (533)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~ 127 (533)
.+.++..+.+..+|+.+++..+.+ .+.+++++.+...++.|+++ +||+..|.-
T Consensus 10 l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~------YIDy~~~~G-------------------- 63 (432)
T COG0001 10 LFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNE------YIDYVLGWG-------------------- 63 (432)
T ss_pred HHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCE------eeehhccCc--------------------
Confidence 344555666777888877766532 33488999999999999999 999988862
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHH
Q 009517 128 PSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMM 207 (533)
Q Consensus 128 p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~ 207 (533)
|.++.+. ++.|++++.+++.+ -..|+.+. ++.-.+|+.+.++.+ ..+.|.++|++|||...++
T Consensus 64 p~ilGH~------~p~V~~Av~~~l~~-----G~~fg~Pt---e~Ei~~Aell~~~~p---~~e~vrfvnSGTEAtmsAi 126 (432)
T COG0001 64 PLILGHA------HPAVVEAVQEQLER-----GLSFGAPT---ELEVELAELLIERVP---SIEKVRFVNSGTEATMSAI 126 (432)
T ss_pred ccccCCC------CHHHHHHHHHHHHh-----cCCCCCCC---HHHHHHHHHHHHhcC---cccEEEEecchhHHHHHHH
Confidence 3344444 68899999999987 23454432 333345555554422 3489999999999999999
Q ss_pred HHhccCCC-CeEEEcCCcCcchHHHHHH-hCCe-------------------EEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 208 QLLIRSEN-DGILCPIPQYPLYSASIAL-HGGT-------------------LVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 208 ~~l~~~~g-d~Vlv~~p~~~~~~~~~~~-~g~~-------------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
+..+.-.| |+|+..+-+|+++.+.+.. +|.- ++.+|++ |++.+++++++.
T Consensus 127 RlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al~~~~~~~-- 197 (432)
T COG0001 127 RLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEALEEAFEEY-- 197 (432)
T ss_pred HHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHHHHHHHHc--
Confidence 99864445 8999999999998776544 2211 2222222 899999999885
Q ss_pred cCCCeeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccc-CCCCcccHHHHHhhcCCCCCCceEE
Q 009517 267 KGITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYV-PEKKFHSFKKVSRSMGYGEKDISLV 343 (533)
Q Consensus 267 ~g~~~~~iil~~p-~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vi 343 (533)
|.++.+||++.. .| -|. .+.++.+++|.++|+++|+++|+||+.++|... ++ .+++.++.||
T Consensus 198 -g~~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gG---------aq~~~gi~PD---- 262 (432)
T COG0001 198 -GDDIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGG---------AQGYYGVEPD---- 262 (432)
T ss_pred -CCcEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcc---------cccccCcCcc----
Confidence 457888888844 66 455 556667999999999999999999999998765 22 2333444788
Q ss_pred EEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh----hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHH
Q 009517 344 SFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA----SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (533)
Q Consensus 344 ~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~----~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 419 (533)
+.+|+|.++ .|+++|.+.+ ..++|+.+.... ..|++.|+++..|..+.|+.. ...+..+
T Consensus 263 -lttlGKiIG--GGlP~ga~gG---r~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l-----------~~~~~~y 325 (432)
T COG0001 263 -LTTLGKIIG--GGLPIGAFGG---RAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEEL-----------MTEEGVY 325 (432)
T ss_pred -hhhhhhhhc--CCcceeeecc---HHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHH-----------HhcccHH
Confidence 889999995 4999999987 999999886542 377899999999999887421 1111256
Q ss_pred HHHHHHHHHHHHHHhcC---CCceE-ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 420 SSLARRAKTLEDAFNSL---EGITC-NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 420 ~~~~~~~~~l~~~L~~~---~g~~~-~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
+++.++.+.|++.|++. -|+.+ +...|+||.+.-.+.+....+++...+...-..+... +.++||++.|+. |.
T Consensus 326 ~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~-~l~~GV~l~ps~-~e- 402 (432)
T COG0001 326 ERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHH-LLNRGVYLAPSQ-FE- 402 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHH-HHhCCcccCCcc-cc-
Confidence 66777777777777654 35544 2344555544322322233444444333333445554 456899999843 21
Q ss_pred CCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 496 VPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 496 ~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
. + -+|.++++++|++.++++.++++++.+
T Consensus 403 -a---~-flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 403 -A---G-FLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred -c---e-eeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 1 3 378889999999999999999887654
No 137
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=8.9e-28 Score=249.86 Aligned_cols=332 Identities=17% Similarity=0.154 Sum_probs=222.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 219 (533)
++.+++++.+++.. ...|+...+..++...+++.+.+.++ ...++|++++|+++|+..+++.++. .++++|+
T Consensus 54 ~p~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii 126 (413)
T cd00610 54 HPEVVEALKEQLAK-----LTHFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEAVEAALKLARAYTGRKKII 126 (413)
T ss_pred CHHHHHHHHHHHHh-----CcCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEE
Confidence 68899999998865 23454443456666777777766655 3578999999999999999998741 3679999
Q ss_pred EcCCcCcchHHHHHHhCC-------------eEEEEecCCC----CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC
Q 009517 220 CPIPQYPLYSASIALHGG-------------TLVPYYLDEA----TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~-------------~~~~v~~~~~----~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP 282 (533)
+.+++|+++.......+. +++.+|.+.. ..+..|++.|++.++.. +.++++|+++..+|+
T Consensus 127 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~ 203 (413)
T cd00610 127 SFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGE 203 (413)
T ss_pred EECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCC
Confidence 999999997665544321 3455655421 12455889999988752 124666666666788
Q ss_pred CccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE
Q 009517 283 TGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (533)
Q Consensus 283 tG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG 361 (533)
+|.++ +.+++++|.++|++||+++|+||+|+++.+.+. .... .. .++ .++ +.||||.+ + .|+|+|
T Consensus 204 ~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~--~~~~-~~-~~~---~~d-----~~t~sK~l-~-~g~~~g 269 (413)
T cd00610 204 GGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK--MFAF-EH-FGV---EPD-----IVTLGKGL-G-GGLPLG 269 (413)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--hhhH-hh-cCC---CCC-----eEEEcccc-c-CccccE
Confidence 89865 778899999999999999999999998654432 1111 11 111 345 56899999 5 389999
Q ss_pred EEEEecCCHHHHHHH--HHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q 009517 362 YMEVTGFSAEVREQI--YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-- 436 (533)
Q Consensus 362 ~v~~~~~~~~~~~~l--~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 436 (533)
|+++ ++++++.+ ..... .+++.+++++.++.++|+ ..+. ..+.++++++++++.+.|+++
T Consensus 270 ~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~-----------~l~~-~~~~~~~~~~~~~l~~~l~~~~~ 334 (413)
T cd00610 270 AVLG---REEIMDAFPAGPGLHGGTFGGNPLACAAALAVLE-----------VLEE-EGLLENAAELGEYLRERLRELAE 334 (413)
T ss_pred EEEE---cHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 9998 89999886 22322 567888998888887774 1121 345666777777777777765
Q ss_pred --CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCc
Q 009517 437 --EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDK 512 (533)
Q Consensus 437 --~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~ 512 (533)
+.+....+.| .++|+.+..+... . .........++ +.|.++||.+.|+. .+++|+++. .++++
T Consensus 335 ~~~~~~~~~~~g-~~~~~~~~~~~~~-~---~~~~~~~~~~~-~~l~~~gv~v~~~~-------~~~lR~~~~~~~t~~~ 401 (413)
T cd00610 335 KHPLVGDVRGRG-LMIGIELVKDRAT-K---PPDKELAAKII-KAALERGLLLRPSG-------GNVIRLLPPLIITEEE 401 (413)
T ss_pred hCCcEEEeecCc-eEEEEEEecCCCc-C---CcchHHHHHHH-HHHHHCCeEEeecC-------CCEEEEECCCcCCHHH
Confidence 1223334555 4455444321000 0 00000123344 44557899999864 237999885 68899
Q ss_pred HHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFH 524 (533)
Q Consensus 513 i~~~~~~l~~~l 524 (533)
|++++++|++++
T Consensus 402 i~~~~~~l~~~l 413 (413)
T cd00610 402 IDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHhC
Confidence 999999998763
No 138
>PLN02721 threonine aldolase
Probab=99.96 E-value=6e-27 Score=238.46 Aligned_cols=322 Identities=13% Similarity=0.148 Sum_probs=208.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-CCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-~gd~Vl 219 (533)
++.+.+++.+.... . ....|.|. ..+|+++++++++. +.++++++|++++..++..++ . +||+|+
T Consensus 19 ~~~~~~a~~~~~~~--~-~~~~~~~~--~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~~l~~~~-~~~gd~Vl 84 (353)
T PLN02721 19 TDAMRAAMANAEVD--D-DVLGYDPT--ALRLEEEMAKIFGK--------EAALFVPSGTMGNLISVLVHC-DVRGSEVI 84 (353)
T ss_pred CHHHHHHHHhccCC--C-cccCCCHH--HHHHHHHHHHHhCC--------ceeEEecCccHHHHHHHHHHc-cCCCCeEE
Confidence 45666665442111 1 23334443 78999999999852 335666666667777777777 5 899999
Q ss_pred EcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC-CCeeEEEEeC-CCCCCccCCCHHHHHH
Q 009517 220 CPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG-ITVRALVVIN-PGNPTGQVLAEENQRA 294 (533)
Q Consensus 220 v~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g-~~~~~iil~~-p~NPtG~~~s~~~l~~ 294 (533)
+++|+|..... .+...|++++.++.++ ++.+|++.+++.+++..+++ +++++|++++ ++||||.+++.+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 85 LGDNSHIHLYENGGISTLGGVHPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred EcCccceehhcccchhhhcCceeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 99999864443 5677899999998764 45789999999997421111 3789999986 5889999999999999
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE-EEEecCCHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY-MEVTGFSAEVR 373 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~-v~~~~~~~~~~ 373 (533)
|+++|+++|+++|+||+|....+.. ...+...+... .+ .++.|+||++ + | ++|| +++ +++++
T Consensus 163 l~~l~~~~g~~livD~a~~~~~~~~--~~~~~~~~~~~-----~d---~~~~s~sK~l-~--~-~~G~~~~~---~~~~~ 225 (353)
T PLN02721 163 VGELAKRHGLKLHIDGARIFNASVA--LGVPVHRLVKA-----AD---SVSVCLSKGL-G--A-PVGSVIVG---SKSFI 225 (353)
T ss_pred HHHHHHHcCCEEEEEchhhhcchhh--hCCCHHHHhhh-----CC---EEEEeccccc-C--C-ceeeEEec---CHHHH
Confidence 9999999999999999985321100 01122122111 22 3355799988 4 3 4676 444 88988
Q ss_pred HHHHHhhhc-cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE--ecCCceeEE
Q 009517 374 EQIYKVASV-NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC--NKAEGAMYL 450 (533)
Q Consensus 374 ~~l~~~~~~-~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~gg~~~ 450 (533)
+.+...... ....+..++.++..+. . +.+..+.+ ++..++++.+.+.|++++++.+ ..+.++ ++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---l~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~ 292 (353)
T PLN02721 226 RKAKRLRKTLGGGMRQVGVLAAAALV--------A---LQENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETN-IV 292 (353)
T ss_pred HhHHHHHHhcCCCeehhHHHHHHHHH--------H---HHHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccce-EE
Confidence 887766542 2222223322222211 0 11222223 2335567889999998878754 344444 57
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
|++++... + .+...++.. |.++||.+.|+. .+++|+++. .+++++++++++|++++..
T Consensus 293 ~~~~~~~~---------~-~~~~~~~~~-L~~~gi~v~~~~-------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 293 YFDITDGS---------R-ITAEKLCKS-LEEHGVLLMPGN-------SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred EEEccCCc---------c-ccHHHHHHH-HHhCCcEEecCC-------CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 76554110 0 123444444 558999999863 238999995 7889999999999987653
No 139
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=5.9e-27 Score=240.49 Aligned_cols=316 Identities=15% Similarity=0.135 Sum_probs=220.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vl 219 (533)
++++++++.+++.+.. ... .....+++.++++++.+..+ .+.+++++++++|+..+++.+...+| ++|+
T Consensus 47 ~p~v~~a~~~~~~~~~-----~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi 116 (377)
T PRK02936 47 HPTVTKAVQEQLDDIW-----HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEANEAALKLARKHTGKSKIV 116 (377)
T ss_pred CHHHHHHHHHHHHhcc-----ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEE
Confidence 6899999999998632 112 22357899999999986543 35899999999999999997642345 6799
Q ss_pred EcCCcCcchHHHHHHh-CCeEE---EEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-CCHHHH
Q 009517 220 CPIPQYPLYSASIALH-GGTLV---PYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQ 292 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~-g~~~~---~v~~~~~~~~--~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~s~~~l 292 (533)
+.++.|++........ +.... ..+..++-.+ .-|++.+++.+.+ ++++|+++.+++++|.. .+++.+
T Consensus 117 ~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~~l 190 (377)
T PRK02936 117 TFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE------EVAAVMLEVVQGEGGVIPADPAFL 190 (377)
T ss_pred EECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC------CeEEEEEecccCCCCCccCCHHHH
Confidence 9999999754333222 22111 1111110000 1178999998865 78999999999999976 588999
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
++|.++|++||+++|+||+|.+|.+.|. ..++.. ..+ .+| +.+|||++ + +|+|+||+++ ++++
T Consensus 191 ~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~~~~~--~~~---~~d-----i~t~sK~l-~-~G~~ig~v~~---~~~~ 253 (377)
T PRK02936 191 QEVQTLCKKFGALLIIDEVQTGIGRTGT--LFAYEQ--FGL---DPD-----IVTVAKGL-G-NGIPVGAMIG---KKEL 253 (377)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCch--hhHHHh--hCC---CCc-----EEEEcccc-c-CCCccEEEEE---cHHH
Confidence 9999999999999999999999777553 222111 122 455 34799999 6 7999999998 8999
Q ss_pred HHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecCCce
Q 009517 373 REQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKAEGA 447 (533)
Q Consensus 373 ~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~gg 447 (533)
++.+..... .++++++++|+++.++|+.. . .+...++++++.+++++.|++ ++.+..+.+. |
T Consensus 254 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~-----------~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~-g 320 (377)
T PRK02936 254 GTAFGPGSHGSTFGGNPLAMAAAKEVLQVI-----------K-QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGK-G 320 (377)
T ss_pred HhhccCCCCCCCCCCCHHHHHHHHHHHHHH-----------H-hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeec-c
Confidence 888865433 56788999999999988521 1 123445566666777776665 3334444454 4
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l 524 (533)
+++|+.+..+ ...+ ...|.++||.+.|+ +.+++||++ ..++++|++++++|++++
T Consensus 321 ~~~~i~~~~~--------------~~~~-~~~l~~~gv~v~~~-------g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 321 LMIGIECTEE--------------VAPV-IEQLREEGLLVLSA-------GPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred eEEEEEecch--------------HHHH-HHHHHHCCeEEecC-------CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 7788665411 2233 35667789999873 234899996 488999999999998763
No 140
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.6e-26 Score=242.77 Aligned_cols=315 Identities=14% Similarity=0.142 Sum_probs=216.3
Q ss_pred CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCe
Q 009517 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 159 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
....|+...+..+|++++|++++. ++.|++++|. .+...++.+++ ++||.|++++|+|..+...++..|++
T Consensus 138 sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~~~G~-~an~~~i~al~-~~Gd~Vi~d~~~h~s~~~~~~~~Ga~ 208 (489)
T PLN02483 138 SRVDGGTTKLHRELEELVARFVGK-------PAAIVFGMGY-ATNSTIIPALI-GKGGLIISDSLNHNSIVNGARGSGAT 208 (489)
T ss_pred cccccCCcHHHHHHHHHHHHHhCC-------CcEEEECCHH-HHHHHHHHHhC-CCCCEEEEcchhhHHHHHHHHHcCCe
Confidence 456688888899999999999862 4567776664 45557777777 89999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcC-CC-----eeEEEEeC-CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKG-IT-----VRALVVIN-PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEV 311 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g-~~-----~~~iil~~-p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~ 311 (533)
++.++.. |++++++.+++....+ ++ .++++++. ..|++|.+.+ +++|+++|++||+++|+||+
T Consensus 209 v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa 278 (489)
T PLN02483 209 IRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEA 278 (489)
T ss_pred EEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECc
Confidence 9999854 5677777776432111 12 25566664 5699999987 99999999999999999999
Q ss_pred cccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-c---cccCC
Q 009517 312 YQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-V---NLCSN 387 (533)
Q Consensus 312 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~---~~~~~ 387 (533)
|+...++.. ......+ ..+ ++...+|+++||||+| |++| ||+++ ++++++.+..... . ...++
T Consensus 279 ~s~g~~G~~--G~g~~~~-~~v---~~~~~dI~~~SfSKs~-g~~G---G~i~~---~~~li~~l~~~~~~~~~~~~~~p 345 (489)
T PLN02483 279 HSIGAVGKT--GRGVCEL-LGV---DPADVDIMMGTFTKSF-GSCG---GYIAG---SKELIQYLKRTCPAHLYATSMSP 345 (489)
T ss_pred CccCccCCC--CCchHHh-cCC---CcccCcEEEEecchhc-ccCc---eEEEc---CHHHHHHHHHhCccccccCCcCH
Confidence 974333211 1111111 111 2333568899999999 6666 99987 9999999887542 1 12223
Q ss_pred hHHHHHHHHHcC---CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHH
Q 009517 388 ISGQILASLVMS---PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAA 464 (533)
Q Consensus 388 ~~~q~a~~~~L~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~ 464 (533)
+..| ++.+.|+ ... ..+...+++++++++++++++.|+++ |+.+..+.++..+|+-+..+..
T Consensus 346 ~~~~-~~~aaL~~l~~~~--------g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~~~----- 410 (489)
T PLN02483 346 PAVQ-QVISAIKVILGED--------GTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAK----- 410 (489)
T ss_pred HHHH-HHHHHHHHHHhCc--------cccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCHHH-----
Confidence 3333 3333332 000 00122345678999999999999998 8877766555555533322211
Q ss_pred HhcCCCChHHHHHHHHHccceEEEcCCCCC-CCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 465 EAEKTVPDAFYCRRLLNATGIVLVPGSGFG-QVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 465 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
...++.+++ ++||.+.| ..|. .+.+.+.+||+++ +++|+|++++++|+++++.+.-
T Consensus 411 -------~~~~~~~Ll-~~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~ 469 (489)
T PLN02483 411 -------IPAFSRECL-KQNVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGI 469 (489)
T ss_pred -------HHHHHHHHH-HCCcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 234555655 57999997 5553 2333458999995 7899999999999999887643
No 141
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=2.5e-27 Score=244.85 Aligned_cols=360 Identities=13% Similarity=0.114 Sum_probs=241.0
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
+..++++...++.|+++ ++|+..|.... .+... ++++++++.+++.+.
T Consensus 24 ~~~~~~G~~~~d~dG~~------~lD~~~g~~~~--------------------~lGh~------~p~v~~A~~~~~~~~ 71 (406)
T PRK12381 24 IPVRGEGSRLWDQQGKE------YIDFAGGIAVN--------------------ALGHA------HPALREALNEQASKF 71 (406)
T ss_pred eEEEeecCEEEeCCCCE------EEEcCcCHhhc--------------------cCCCC------CHHHHHHHHHHHhhc
Confidence 45667777667777777 88886654321 01111 588999999998763
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------CCCeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-------ENDGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-------~gd~Vlv~~p~~~~~ 228 (533)
.. ....|... ...+|.+.++++ .+ .++++++++|++|++.+++.+... ...+|+..+.+|++.
T Consensus 72 ~~-~~~~~~~~-~~~~la~~l~~~----~~----~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~ 141 (406)
T PRK12381 72 WH-TGNGYTNE-PVLRLAKKLIDA----TF----ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGR 141 (406)
T ss_pred cc-ccCccCCH-HHHHHHHHHHhh----CC----CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCc
Confidence 22 11122211 133444444443 22 469999999999999999987421 346899999999998
Q ss_pred HHHHHHhCCeEEEE----ecCCC--CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC--CHHHHHHHHHHHH
Q 009517 229 SASIALHGGTLVPY----YLDEA--TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL--AEENQRAIVDFCK 300 (533)
Q Consensus 229 ~~~~~~~g~~~~~v----~~~~~--~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~--s~~~l~~i~~l~~ 300 (533)
.......+...... ++.+. .-...|++.+++.+++ ++++|++ .|.||+|-++ +.+.+++|+++|+
T Consensus 142 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~ 214 (406)
T PRK12381 142 TLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD------QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCD 214 (406)
T ss_pred chhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC------CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHH
Confidence 76554443321100 11000 0012378999988865 6878877 5888887644 7899999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|.++.++|. ...... ..+ .+| +.||||++ | +|+|+||+++ ++++++.+....
T Consensus 215 ~~~~llI~DEv~tG~gr~G~--~~~~~~--~~v---~pD-----i~t~sK~l-~-gG~~ig~~~~---~~~~~~~~~~~~ 277 (406)
T PRK12381 215 RHNALLIFDEVQTGVGRTGE--LYAYMH--YGV---TPD-----VLTTAKAL-G-GGFPIGAMLT---TEKCASVMTVGT 277 (406)
T ss_pred HcCCEEEEcchhhCCCCCcc--hhhhHh--hCC---CCC-----EEEehhhh-h-CCCceEEEEE---cHHHHhhcCCCC
Confidence 99999999999999877653 222111 122 466 46999999 5 6999999998 899998886543
Q ss_pred -hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCceeEEecccC
Q 009517 381 -SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEGAMYLFPRIQ 455 (533)
Q Consensus 381 -~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~gg~~~~~~~~ 455 (533)
..+++++++.++++.++|+ ..+ ...++++++++.+++.+.|+++ +.+..++.. |+++++.+.
T Consensus 278 ~~~t~~~~pl~~aaa~a~l~-----------~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-Gl~~~~~l~ 344 (406)
T PRK12381 278 HGTTYGGNPLASAVAGKVLE-----------LIN-TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGL-GLLIGCVLN 344 (406)
T ss_pred CCCCCCCCHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecC-eEEEEEEec
Confidence 3678889999999988774 111 2356778888889999988876 112233334 455565443
Q ss_pred CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHHHHhc
Q 009517 456 LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMDKFR 532 (533)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~~~~ 532 (533)
.+.. ..... +...+.++||++.++ +.+++||++. +++++|++++++|+++++++.++.+
T Consensus 345 ~~~~----------~~~~~-~~~~l~~~Gv~v~~~-------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~~~ 405 (406)
T PRK12381 345 AEYA----------GKAKQ-ISQEAAKAGVMVLIA-------GPNVVRFAPALNISEEEITTGLDRFARACERFVSRGS 405 (406)
T ss_pred Cchh----------hHHHH-HHHHHHHCCcEEeeC-------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 2110 01223 335567789999863 1238999985 8999999999999999999877653
No 142
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.96 E-value=3e-27 Score=244.41 Aligned_cols=349 Identities=14% Similarity=0.129 Sum_probs=234.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
+..++++...++.||++ +|||..|.... .+... ++++++++.+++.+.
T Consensus 25 ~~~~~~G~~~~d~dG~~------~iD~~~~~~~~--------------------~lGh~------~p~v~~a~~~~~~~~ 72 (403)
T PRK05093 25 IPVRGEGSRVWDQQGKE------YIDFAGGIAVT--------------------ALGHC------HPALVKALKEQGEKL 72 (403)
T ss_pred eEEEeecCEEEeCCCCE------EEEcCcCHHhc--------------------cCCCC------CHHHHHHHHHHHHhc
Confidence 55666666666666666 88886653221 01211 689999999988763
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C-CCeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E-NDGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~-gd~Vlv~~p~~~~~ 228 (533)
.. +.... ..+....+++.+.+..+ .+.++++++|++|+..+++.++.. . .++|+..+-+|++.
T Consensus 73 ~~-----~~~~~-~~~~~~~l~~~l~~~~~----~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~ 142 (403)
T PRK05093 73 WH-----ISNVF-TNEPALRLAKKLIDATF----AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGR 142 (403)
T ss_pred Cc-----ccCcc-CCHHHHHHHHHHHhhCC----CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCc
Confidence 21 11111 11223345555544322 468999999999999999977411 2 35788899999986
Q ss_pred HHHHHHhCCe-------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC--CHHHHH
Q 009517 229 SASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL--AEENQR 293 (533)
Q Consensus 229 ~~~~~~~g~~-------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~--s~~~l~ 293 (533)
...+...+.. +..++. -|++.+++.+.+ ++++|+++ |.||+|.++ +.+.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~------~~aaiiie-p~~~~gg~~~~~~~~l~ 208 (403)
T PRK05093 143 TLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDD------HTCAVVVE-PIQGEGGVIPATPEFLQ 208 (403)
T ss_pred hhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcC------CeEEEEEe-cccCCCCCccCCHHHHH
Confidence 5433222111 111111 178999988865 68888877 777777654 889999
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|+++|++||+++|+||+|+++.++|. ..+... .++ .+| +.||||++ + +|+|+||+++ +++++
T Consensus 209 ~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~--~~~---~pd-----i~s~sK~l-~-~G~rig~vv~---~~~i~ 271 (403)
T PRK05093 209 GLRELCDQHNALLIFDEVQTGMGRTGD--LFAYMH--YGV---TPD-----ILTSAKAL-G-GGFPIGAMLT---TAEIA 271 (403)
T ss_pred HHHHHHHHcCCEEEEechhhCCCCCcc--chhhhh--cCC---CCC-----EEEecccc-c-CCcceEEEEE---cHHHH
Confidence 999999999999999999999877663 222111 122 466 67999999 5 7999999998 99999
Q ss_pred HHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--CceEecCCceeE
Q 009517 374 EQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-E--GITCNKAEGAMY 449 (533)
Q Consensus 374 ~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~gg~~ 449 (533)
+.+.... ..+++++++.|+++.++|+. .. ...++++++++++++.+.|+++ . ++....+.+|++
T Consensus 272 ~~l~~~~~~~t~~~~~~~~~aa~a~L~~-----------~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~ 339 (403)
T PRK05093 272 SHFKVGTHGSTYGGNPLACAVAEAVFDI-----------IN-TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLL 339 (403)
T ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHHH-----------Hh-hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceE
Confidence 8887543 36678899999999887741 11 1345678888999999999876 1 222233456788
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+|+.+..+.. .....++..++ ++||.+.|+ +.+++||+++ .++++|++++++|+++++++
T Consensus 340 ~~~~l~~~~~----------~~~~~~~~~l~-~~Gv~v~~~-------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 340 IGAELKPQYK----------GRARDFLNAAA-EEGVMVLVA-------GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred EEEEecCcch----------hHHHHHHHHHH-HCCeEEecC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 8865531100 12345555555 579999973 2348999764 68999999999999998764
No 143
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=229.38 Aligned_cols=359 Identities=15% Similarity=0.126 Sum_probs=265.6
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCc-cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSF-DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~ 142 (533)
.+....|+|.+..+.++.+...|+++|.+|+++ ..+--.++|+++ +
T Consensus 32 k~~ahnyhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhch---------------------------------p 78 (427)
T KOG1402|consen 32 KYGAHNYHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCH---------------------------------P 78 (427)
T ss_pred hcccccCCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCC---------------------------------H
Confidence 678889999999999999999999999999998 778888888875 8
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-----C--CC
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S--EN 215 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~--~g 215 (533)
.+++++.++..+....+...|.+.. .+ .++++...+| .+.|+.++.+.||.+.+++..++ + |.
T Consensus 79 ki~~aLqeq~~kLtlssrafYnd~~--~~----f~~~vt~lf~----~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~ 148 (427)
T KOG1402|consen 79 KIIKALQEQADKLTLSSRAFYNDVL--GE----FAEYVTKLFG----YDKVLPMNTGAEAVETACKLARKWGYRKKNIPK 148 (427)
T ss_pred HHHHHHHHHHhHhhhhhHHHhhhhH--HH----HHHHHHHhcC----cceeeecccchhHHHHHHHHHHHHHHhhccCCc
Confidence 8999999988876655566777664 34 4555555444 67899999999999999998861 1 22
Q ss_pred --CeEEEcCCcCcchHHHHHHhCCeEEEEecCCC----CCCCC------------CHHHHHHHHHHHHhcCCCeeEEEEe
Q 009517 216 --DGILCPIPQYPLYSASIALHGGTLVPYYLDEA----TGWGL------------ETSEVKKQLEAAKAKGITVRALVVI 277 (533)
Q Consensus 216 --d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~----~~~~l------------d~~~l~~~i~~~~~~g~~~~~iil~ 277 (533)
.+|+....+|++-. .-.+.+..+ .+|+. |.++|+.++++ ++.+++++.
T Consensus 149 nka~il~~~~nFhGrT---------~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~-----~~vaaFivE 214 (427)
T KOG1402|consen 149 NKAKILSAENNFHGRT---------LGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS-----PNVAAFIVE 214 (427)
T ss_pred cceeEEEecccccCce---------eeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC-----CCeeEEEee
Confidence 23444445555432 222222111 12221 78999999987 389999988
Q ss_pred CCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC
Q 009517 278 NPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (533)
Q Consensus 278 ~p~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~ 356 (533)
..+...|++. ++..++++.++|.+||+++|.||+++++..+|+ .++.++..+.|| +.-|.|+++|
T Consensus 215 PIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk-------~la~d~env~PD-----ivilgKalSG-- 280 (427)
T KOG1402|consen 215 PIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK-------LLACDYENVRPD-----IVILGKALSG-- 280 (427)
T ss_pred ccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc-------EEEeehhhcCCC-----eEEEeccccC--
Confidence 8899999855 555699999999999999999999999999886 223333333677 3347899964
Q ss_pred C-CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 357 G-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 357 G-~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
| ++++.+++ +++++..++...+ .|++.|+++++++.++|+ ++. -+.+.++..+..+.|++.|+
T Consensus 281 G~~Pvsavl~---~~~im~~~~pgeHgsTyggNpLg~~vaiAale-----------vi~-eekL~era~~lG~~l~~~L~ 345 (427)
T KOG1402|consen 281 GVYPVSAVLA---DDDIMLNIKPGEHGSTYGGNPLGCAVAIAALE-----------VIV-EEKLVERAAKLGEILRDQLN 345 (427)
T ss_pred CeeeeEEEEe---cHHHHhccCCCccccccCCChHHHHHHHHHHH-----------HHH-HHHHHHHHHHHHHHHHHHHH
Confidence 6 89999998 9999999888776 889999999999999984 333 26677888888999999999
Q ss_pred cC----CC-ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--
Q 009517 435 SL----EG-ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-- 507 (533)
Q Consensus 435 ~~----~g-~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-- 507 (533)
++ |+ ++.++..|-+....--+.+. .+.+.+..+ ..+++.|++..| .+.+.||+++-
T Consensus 346 ~l~~~~p~~v~~VRGrGl~~ai~i~~~~~--------~~~~aw~~c--l~lk~~g~LAkp-------tH~~IiRfaPPL~ 408 (427)
T KOG1402|consen 346 KLQKKFPHVVKEVRGRGLLNAIVINPSKT--------SGQDAWDVC--LALKENGLLAKP-------THGNIIRFAPPLV 408 (427)
T ss_pred hccccccchhheeeccceEEEEEeccccc--------cchhHHHHH--HcccccccccCC-------CCCCeEEecCCcc
Confidence 87 33 46778888665543222111 122223333 557889999987 23348999994
Q ss_pred CCcCcHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~ 525 (533)
++++++++++++|++.+.
T Consensus 409 I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 409 ISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cCHHHHHHHHHHHHHHhc
Confidence 899999999999998764
No 144
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=4.6e-26 Score=232.84 Aligned_cols=301 Identities=13% Similarity=0.135 Sum_probs=209.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 248 (533)
+.++++.+|++++ .+.+++++|+++++..++.++. ++||+|+++.+.|......++..|++++.++.+.++
T Consensus 53 ~~~~~e~lA~~~g--------~~~~~i~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~ 123 (370)
T TIGR02539 53 IHDFLEDLAEFLG--------MDEARVTHGAREGKFAVMHALC-KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHP 123 (370)
T ss_pred HHHHHHHHHHHhC--------CCceEEECChHHHHHHHHHHhh-CCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcc
Confidence 5677888888864 3467789999999999999998 899999999888665556788899999999987666
Q ss_pred CCCCCHHHHHHHHHHHHh-cCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHH
Q 009517 249 GWGLETSEVKKQLEAAKA-KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~-~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~ 327 (533)
+|.+|+++|++++++..+ .+.++++|++++|+||||...+ +++|+++|+++|+++|+||+|..... + .+..
T Consensus 124 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~-~----~~~~ 195 (370)
T TIGR02539 124 EYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRM-P----VSAK 195 (370)
T ss_pred cCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCc-C----CCHH
Confidence 789999999999975321 1126789999999999999888 88899999999999999999986321 1 1111
Q ss_pred HHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhc-c--------ccCChHHHHHHHHHc
Q 009517 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV-N--------LCSNISGQILASLVM 398 (533)
Q Consensus 328 ~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~-~--------~~~~~~~q~a~~~~L 398 (533)
.. +.+ +++.||||++ + +|.|+||+++ ++++++.+...... . ......++.++..++
T Consensus 196 ----~~---~~d---i~v~s~sK~~-~-~~g~~G~l~~---~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 260 (370)
T TIGR02539 196 ----EI---GAD---FIVGSGHKSM-A-ASGPCGVLGM---SEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASF 260 (370)
T ss_pred ----Hc---CCC---EEEeeCcccc-c-CCCCEEEEEE---CHHHHhhhcccccCCccceeeeecccccccHHHHHHHHH
Confidence 11 233 6679999999 6 4678999998 89999888765421 0 111112344444444
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe--cCCceeEEecccCCCHH-HHHHHHhcCCCChHHH
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN--KAEGAMYLFPRIQLPEK-AIKAAEAEKTVPDAFY 475 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 475 (533)
. ...++++.+.+.++. ++++++.|+++ |+.++ .+..+.|++++++.... ... .......
T Consensus 261 ~----------~~~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~------~~~~~~~ 322 (370)
T TIGR02539 261 P----------HVVERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQK------HKRRGYF 322 (370)
T ss_pred H----------HHHHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhh------hccccHH
Confidence 2 112333334444444 45899999998 88763 35566677765431100 000 0011123
Q ss_pred HHHHHHccceE-EEcCCCCCCCCCCceEEEEe-cCCcCcHHHHHHHHHHHHHH
Q 009517 476 CRRLLNATGIV-LVPGSGFGQVPGTWHFRCTI-LPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 476 ~~~ll~~~gV~-v~pg~~f~~~~g~~~iRis~-~~~~e~i~~~~~~l~~~l~~ 526 (533)
+.+.|.++||. +++ + ..++|||++ ..+++++++++++|++++++
T Consensus 323 ~~~~L~e~GI~~ir~----~---~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 323 LYEELKKRGIHGIRS----G---QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHhCCCccccC----C---cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 44666778997 554 2 123899996 47889999999999988764
No 145
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=2.7e-26 Score=237.79 Aligned_cols=323 Identities=18% Similarity=0.204 Sum_probs=225.6
Q ss_pred CHHHHHHHHHHHhcCCCCCcc-ccC----CCcccHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHh----
Q 009517 141 SADSIERAWQILDQIPGRATG-AYS----HSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLL---- 210 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~-~Y~----~~~G~~~lr~aia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l---- 210 (533)
|..+++++.+.+......... .|. ...++.++|+.++++++ .+ +++|++|+|+++++..++..+
T Consensus 31 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~~~~g~t~~l~~~~~~~~~~~ 104 (403)
T TIGR01979 31 PQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIVFTRGTTESINLVAYSWGDSN 104 (403)
T ss_pred CHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCCHHHHHHHHHHHhhhhc
Confidence 688888887776542210010 111 12246688899998875 34 579999999999999998875
Q ss_pred ccCCCCeEEEcCCcCcch----HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 211 IRSENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 211 ~~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
. .+||+|+++++.|+.. ...+...|++++.++.++ ++.+|++.+++++++ ++++|++++|+||||.+
T Consensus 105 ~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~~ 175 (403)
T TIGR01979 105 L-KAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDD--DGTLDLDDLEKLLTE------KTKLVAITHVSNVLGTV 175 (403)
T ss_pred C-CCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCC--CCCCCHHHHHHHhcc------CCeEEEEEccccccccc
Confidence 3 6899999999987763 345567799999999873 457899999999976 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++ +++|.++|+++|+++|+|++|.... .+ .++ .++ ..| +++.|++|.+ |++| +|++++
T Consensus 176 ~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~-~~~----~~~---~~d---~~~~s~~K~~-gp~G--~g~l~~- 233 (403)
T TIGR01979 176 NP---VEEIAKLAHQVGAKVLVDGAQAVPH----MP-VDV----QAL---DCD---FYVFSGHKMY-GPTG--IGVLYG- 233 (403)
T ss_pred CC---HHHHHHHHHHcCCEEEEEchhhcCc----cc-cCc----ccc---CCC---EEEEeccccc-CCCC--ceEEEE-
Confidence 99 8899999999999999999996421 11 111 111 233 7789999977 7666 888887
Q ss_pred cCCHHHHHHHHHhhh----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHH
Q 009517 367 GFSAEVREQIYKVAS----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLA 423 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~ 423 (533)
++++++.+..... ...+++.....++..+++ .+.+ ..+.+.++..
T Consensus 234 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~g~~~~~~~~~ 301 (403)
T TIGR01979 234 --KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAID----------YLEAIGLENIEAHEH 301 (403)
T ss_pred --chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHH----------HHHHhCHHHHHHHHH
Confidence 7777766532110 011334444455555442 1111 1456778888
Q ss_pred HHHHHHHHHHhcCCCceEecCC-----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC---
Q 009517 424 RRAKTLEDAFNSLEGITCNKAE-----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--- 495 (533)
Q Consensus 424 ~~~~~l~~~L~~~~g~~~~~~~-----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--- 495 (533)
+.++.+.+.|++++|++++.|. +++..| .++ . . +..+ +.+.|+++||.+.+|..+..
T Consensus 302 ~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~-~~~--~----------~-~~~~-~~~~L~~~gI~v~~g~~~~~~~~ 366 (403)
T TIGR01979 302 ELTAYALERLGEIPGLRIYGPRDAEDRGGIISF-NVE--G----------V-HPHD-VGTILDEEGIAVRSGHHCAQPLM 366 (403)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCccccCceEEE-EeC--C----------c-CHHH-HHHHHhhCCEEEcchhhhhHHHH
Confidence 8899999999988889887654 566554 232 1 1 1222 34677889999998763311
Q ss_pred --CCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 496 --VPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 496 --~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
....+++|||++ .++++++++++.|+++++.+
T Consensus 367 ~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 367 RRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 001238999997 68899999999999877654
No 146
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=7.5e-26 Score=234.47 Aligned_cols=322 Identities=14% Similarity=0.103 Sum_probs=218.9
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
.+++++++.+++.+.... +...+.......+|++.+|++++ .+.+++++|+++|+..+++++. .+||.
T Consensus 70 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~sG~~An~~~l~~l~-~~g~~ 140 (407)
T PRK07179 70 HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FESCLLCQSGWAANVGLLQTIA-DPNTP 140 (407)
T ss_pred CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhC-CCCCE
Confidence 688999999988764211 11112222235778888888864 3567889999999999999998 78999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|++..+.|......+...|++++.++ ..|++++++++++. ++++|++++++||||.+++ +++|++
T Consensus 141 v~~~~~~h~s~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~p---l~~I~~ 205 (407)
T PRK07179 141 VYIDFFAHMSLWEGVRAAGAQAHPFR-------HNDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAP---LADIVD 205 (407)
T ss_pred EEEECCcCHHHHHHHHHCCCeEEEec-------CCCHHHHHHHHHhc-----CCeEEEECCCCCCCCcccc---HHHHHH
Confidence 99999999888877888888876654 24899999999762 4778888899999999999 889999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|+++|+++|+||+|....++.. . ..+ ...++ ..+. ..+++.|+||++ | .|+||+++ ++++++.+.
T Consensus 206 l~~~~~~~livDea~~~g~~g~~-g-~g~---~~~~~-~~~~-vdi~~~S~sK~~-g---~~~G~l~~---~~~~~~~~~ 271 (407)
T PRK07179 206 IAEEFGCVLVVDESHSLGTHGPQ-G-AGL---VAELG-LTSR-VHFITASLAKAF-A---GRAGIITC---PRELAEYVP 271 (407)
T ss_pred HHHHcCCEEEEECcccccCcCCC-C-Cch---HHhcC-CCCC-CCEEEeechHhh-h---ccCeEEEe---CHHHHHHHH
Confidence 99999999999999985443211 1 111 11111 0111 137789999988 4 37999998 888888776
Q ss_pred Hhhh--cc-ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEeccc
Q 009517 378 KVAS--VN-LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 454 (533)
Q Consensus 378 ~~~~--~~-~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~ 454 (533)
.... .. .+.++...+++.++++ ..+..+..+++++++++++++.|+++ |+.+. +.+. ++++.+
T Consensus 272 ~~~~~~~~~~t~~~~~~aa~~aal~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~~~-i~~l~~ 337 (407)
T PRK07179 272 FVSYPAIFSSTLLPHEIAGLEATLE-----------VIESADDRRARLHANARFLREGLSEL-GYNIR-SESQ-IIALET 337 (407)
T ss_pred HhCcCeeeCCCCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCC-EEEEEe
Confidence 5432 11 2223333333334442 22333456788999999999999998 87765 4444 444333
Q ss_pred CCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 455 QLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
..+. ....+...|.++||.+..-...+...+.+++||++. +++++|++++++|++++++.
T Consensus 338 ~~~~-------------~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 338 GSER-------------NTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred CCHH-------------HHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 2110 122244566778998432100011123459999996 79999999999999988764
No 147
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=1.5e-26 Score=233.97 Aligned_cols=319 Identities=13% Similarity=0.083 Sum_probs=219.4
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
|.++|+.+++++.+.+.. ...|.+..+..++++.++++++ ++++++++|+++++..+++.++ ++||
T Consensus 7 ~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~~a~~~g--------~~~~~~~~~gt~a~~~~~~~l~-~~gd 72 (338)
T cd06502 7 VTGPTPEMLEAMAAANVG-----DDVYGEDPTTAKLEARAAELFG--------KEAALFVPSGTAANQLALAAHT-QPGG 72 (338)
T ss_pred CCCCCHHHHHHHHhcccC-----CcccCCCHHHHHHHHHHHHHhC--------CCeEEEecCchHHHHHHHHHhc-CCCC
Confidence 444588888888776532 2357666667888888888863 4578888888899999999998 8999
Q ss_pred eEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh-cCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 217 GILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA-KGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~-~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
+|+++.|+|..+.. .....|++++.++.+. +.+|+++|++++++... ..+++++|++++|+|| |.+++.+++
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l 148 (338)
T cd06502 73 SVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDEL 148 (338)
T ss_pred eEEEecCcceeeecCCcHHHHcCceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHH
Confidence 99999999876432 3455899999998742 57999999999975210 0125889999999998 667799999
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE-EEEecCCHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY-MEVTGFSAE 371 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~-v~~~~~~~~ 371 (533)
++|+++|+++|+++|+||+|..+...... .++..... ..+ +++.|+||++ |++| |+ +++ +++
T Consensus 149 ~~i~~~~~~~~~~livDea~~~~~~~~~~--~~~~~~~~-----~~d---~~~~s~sK~~-~~~~---g~~~~~---~~~ 211 (338)
T cd06502 149 KAISALAKENGLPLHLDGARLANAAAALG--VALKTYKS-----GVD---SVSFCLSKGG-GAPV---GAVVVG---NRD 211 (338)
T ss_pred HHHHHHHHHcCCeEeechHHHHHHHHhcC--CCHHHHHh-----cCC---EEEEeccccC-CCcc---ceEEEC---CHH
Confidence 99999999999999999998643221111 12222211 233 4577999998 6676 44 444 888
Q ss_pred HHHHHHHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcee
Q 009517 372 VREQIYKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAM 448 (533)
Q Consensus 372 ~~~~l~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~ 448 (533)
+++.+..... .+++.+.+.+.++...|+... + .+..+++.++++++.+.|+++ |+.+.++.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~--------~----~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~ 278 (338)
T cd06502 212 FIARARRRRKQAGGGMRQSGFLAAAGLAALENDL--------W----LRRLRHDHEMARRLAEALEEL-GGLESEVQTNI 278 (338)
T ss_pred HHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCch--------H----HHHHHHHHHHHHHHHHHHHhc-CCCcccccCCe
Confidence 9988876643 233456677777777775321 1 234456667778999999988 66666667666
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHH--HccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLL--NATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
.++ .++.... ....+..++. .++||.+.+... ++|||++. +++++++++++++++
T Consensus 279 ~~v-~~~~~~~-----------~~~~l~~~l~~~~~~gi~~~~~~~-------~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 279 VLL-DPVEANA-----------VFVELSKEAIERRGEGVLFYAWGE-------GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEE-ecCCccH-----------HHHHHHHHHHHhhhCCEEEEecCC-------CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 543 2321100 0111122221 257999887321 38999996 688899999998864
No 148
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=6.5e-26 Score=234.08 Aligned_cols=230 Identities=16% Similarity=0.156 Sum_probs=178.0
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g 236 (533)
..|+.+. ...|++++|++.+ .+++++++||++|+..++.+++ ++||.|+++.|+|.++...+ ...|
T Consensus 78 ~R~~~Pt-~~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~-~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 78 SRFNHPN-SEIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFV-RPGDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred cCCCCcC-HHHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 4566555 6899999999864 4578999999999999999998 89999999999999997664 4578
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH---cCCEEEEccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK---EGLVLLADEVYQ 313 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~---~~~~lI~De~y~ 313 (533)
++++.++. +.|++.+++++.+... .+++++|++++|+||||.+++.+++.+|++.|++ +++++|+||+|.
T Consensus 148 i~~v~~~~------~~d~~~l~~~l~~~~~-~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~ 220 (427)
T PRK07049 148 VGAVGFAD------GLSEAAIGAAAEAAAA-KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLL 220 (427)
T ss_pred cEEEEEeC------CCCHHHHHHHHHhhcc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcc
Confidence 88777762 3578888888764211 1268999999999999999998888888887654 689999999987
Q ss_pred cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHH
Q 009517 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQI 392 (533)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~ 392 (533)
...+.. + + .. .. .|++.||||.++|++|+|+||+++ ++++++.+..... ...+.+++.+.
T Consensus 221 ~~~~~~--p---l-----~~---g~---divv~S~SK~~gG~~glr~G~vv~---~~~l~~~l~~~~~~~g~~ls~~~a~ 281 (427)
T PRK07049 221 GPVFQK--P---L-----EH---GA---DLSVYSLTKYVGGHSDLVAGAVLG---RKALIRQVRALRSAIGTQLDPHSCW 281 (427)
T ss_pred ccccCC--c---c-----cc---CC---CEEEEcCceeecCCCCcEEEEEEC---CHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 643211 1 1 11 12 378899999996589999999997 8899998887765 45667888888
Q ss_pred HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 393 a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
++...|+ .+....++..++++.+.+.|++.|++.
T Consensus 282 l~~r~L~--------------tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 282 MLGRSLE--------------TLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred HHHcCCC--------------hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 8877764 233444556888999999999887654
No 149
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.95 E-value=1.1e-26 Score=241.15 Aligned_cols=376 Identities=11% Similarity=0.046 Sum_probs=238.5
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ ++|+..|.... ..+++ ++.+++++.+++.+.
T Consensus 26 ~~~~~~G~~l~d~dG~~------~lD~~~g~~~~----------------------~lGh~----~~~i~~a~~~~~~~~ 73 (425)
T PRK08088 26 FADRAENCRVWDVEGRE------YLDFAGGIAVL----------------------NTGHL----HPKVVAAVEAQLKKL 73 (425)
T ss_pred eEEeeeeCEEEeCCCCE------EEEcCCchhhc----------------------CCCCC----CHHHHHHHHHHHhhC
Confidence 45566666666667666 88887765443 22222 688999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-CCCeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-~gd~Vlv~~p~~~~~~~~~~~ 234 (533)
. +.+.+..+.+ ...++|+++....+.+. .++++++++|++|++.+++.++.. ...+|+..+++|++....+..
T Consensus 74 ~----~~~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~ 147 (425)
T PRK08088 74 S----HTCFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLA 147 (425)
T ss_pred C----CccccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHH
Confidence 2 1222222223 33467777776544222 247888888889999988877522 235678889999998876666
Q ss_pred hCCeEEE----------------EecCCCCCCCC--CHHHHHHHHHHHHhcCCCeeEEEEeC-CCCCCccCCCHHHHHHH
Q 009517 235 HGGTLVP----------------YYLDEATGWGL--ETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQVLAEENQRAI 295 (533)
Q Consensus 235 ~g~~~~~----------------v~~~~~~~~~l--d~~~l~~~i~~~~~~g~~~~~iil~~-p~NPtG~~~s~~~l~~i 295 (533)
.+....+ +|.+. .+... +++.+++.++... .+.++++|+++. .+|++.+.++++.+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l 225 (425)
T PRK08088 148 LTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRL 225 (425)
T ss_pred hhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHH
Confidence 5432111 11111 11111 1456777775311 123677777773 47887788999999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
+++|++||+++|+||+|+++.+.+. ..++.. .++ .++ +.||||.+ + +|+|+||+++ ++++++.
T Consensus 226 ~~l~~~~~~~lI~Dev~~g~g~~g~--~~~~~~--~~~---~pd-----i~s~sK~l-~-~G~rig~v~~---~~~~~~~ 288 (425)
T PRK08088 226 RALCDEHGIMLIADEVQTGAGRTGT--LFAMEQ--MGV---AAD-----LTTFAKSI-A-GGFPLAGVTG---RAEVMDA 288 (425)
T ss_pred HHHHHHcCCEEEEeccccCCCcCcc--hhHHhh--cCC---CCC-----EEEEeccc-c-CCCcceeeEe---cHHHHhh
Confidence 9999999999999999999766542 222111 111 344 78999999 5 7999999998 9999988
Q ss_pred HHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEeccc
Q 009517 376 IYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 454 (533)
Q Consensus 376 l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~ 454 (533)
+..... .+++++++.|+++..+|+... .+ +.++++++..+.+++.+.+.+.+.|.+..+.+. |+++|+.+
T Consensus 289 ~~~~~~~~t~~~~~~~~~a~~~~l~~~~-----~~---~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l 359 (425)
T PRK08088 289 IAPGGLGGTYAGNPIACAAALAVLKVFE-----QE---NLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIEL 359 (425)
T ss_pred cCCCCCCCCCCcCHHHHHHHHHHHHHHH-----hc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEE
Confidence 865544 678899999999999986321 11 223334444344444454444445544444455 67789776
Q ss_pred CCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 455 QLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
..+.. ...........+. ..+.++||.+.|+..|+ +.|||+++ .++++|++++++|++++++.
T Consensus 360 ~~~~~----~~~p~~~~~~~l~-~~~~~~Gv~~~~~~~~~-----~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 360 FEDGD----HSKPNAKLTAQIV-ARARDKGLILLSCGPYY-----NVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred ecCCC----CCCCCHHHHHHHH-HHHHhCCCEEecCCCCC-----CEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 31100 0000000123333 44556899998865543 38999997 67899999999999998753
No 150
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.95 E-value=3.6e-26 Score=236.59 Aligned_cols=314 Identities=12% Similarity=0.131 Sum_probs=215.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------- 213 (533)
++++++++.+++.+... ...+.......+|.+.++++. + .++++++++|++|++.+++.++..
T Consensus 59 ~~~i~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~ 128 (401)
T PRK00854 59 HPKILAAMVEQAGRLTL--TSRAFRNDQLAPLYEELAALT----G----SHKVLPMNSGAEAVETAIKAVRKWGYEVKGV 128 (401)
T ss_pred CHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhhC----C----CCEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence 58899999999886432 111122223455666666553 2 358999999999999999998511
Q ss_pred -CC-CeEEEcCCcCcchHHHHHHhCCe-------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC
Q 009517 214 -EN-DGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (533)
Q Consensus 214 -~g-d~Vlv~~p~~~~~~~~~~~~g~~-------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~ 278 (533)
+| ++|++..-+|++....+...+.. +..++ ..|++.+++.+.+ ++++|++++
T Consensus 129 ~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~------~~~aii~e~ 195 (401)
T PRK00854 129 PEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEAAITP------NTVAFLVEP 195 (401)
T ss_pred CCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHHHhCC------CeEEEEEcc
Confidence 24 68999998888865444433321 11221 1388999999865 799999999
Q ss_pred CCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 279 PGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 279 p~NPtG~~~s-~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
|+||||.+++ .++|++|+++|++||+++|+||+|+++.+.|. ... ....++ .+| ++ .++|.++| ..
T Consensus 196 ~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~--~~~--~~~~g~---~~D---~~--~~~K~l~g-g~ 262 (401)
T PRK00854 196 IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK--LLA--EEHEGI---EAD---VT--LIGKALSG-GF 262 (401)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch--HhH--HhhcCC---CCC---EE--EecccccC-Cc
Confidence 9999999887 45699999999999999999999998766542 111 101111 355 22 35799953 23
Q ss_pred CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 358 KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 358 ~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
+|+||+++ ++++++.+..... .+++++++.++++.+.|+ ..+. ..+.+.++++++++.+.|+++
T Consensus 263 ~~ig~v~~---~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~-----------~l~~-~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 263 YPVSAVLS---NSEVLGVLKPGQHGSTFGGNPLACAVARAALK-----------VLTE-EGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred cCeEEEEE---cHHHHhcccCCCCCCCCCcCHHHHHHHHHHHH-----------HHHH-cCHHHHHHHHHHHHHHHHHhh
Confidence 79999998 9999887765433 567789999999988874 1121 335677888889999999887
Q ss_pred CC--ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCc
Q 009517 437 EG--ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDK 512 (533)
Q Consensus 437 ~g--~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~ 512 (533)
.. +..+.+.|.++.+.-.. +. .....+++.+ .++||.+.+. +.+++|+++. .++++
T Consensus 328 ~~~~~~~~~g~g~~~~i~~~~-~~-----------~~~~~~~~~L-~~~GV~v~~~-------~~~~lR~~p~~~~t~e~ 387 (401)
T PRK00854 328 RSNIVREVRGRGLMLAVELEP-EA-----------GGARQYCEAL-KERGLLAKDT-------HDHTIRLAPPLVITREQ 387 (401)
T ss_pred ccCceEEEeccceEEEEEEec-Cc-----------hhHHHHHHHH-HHCCeEEecC-------CCCEEEEeCCcccCHHH
Confidence 21 23346777777653212 10 0134455554 4579999752 2238999984 89999
Q ss_pred HHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHK 525 (533)
Q Consensus 513 i~~~~~~l~~~l~ 525 (533)
|++++++|++++.
T Consensus 388 i~~~i~~l~~~l~ 400 (401)
T PRK00854 388 VDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998763
No 151
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=1.5e-25 Score=231.94 Aligned_cols=326 Identities=16% Similarity=0.151 Sum_probs=217.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCccc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh---ccC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---IRS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---~~~ 213 (533)
|+.+++++.+.+..........|....+. .++|+.++++++ .++++|++++|+++++..++.++ . +
T Consensus 30 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~t~~l~~~~~~~~~~~-~ 102 (397)
T TIGR01976 30 PQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANATSLTFLLSRAISRRW-G 102 (397)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCHHHHHHHHHHHHHhcC-C
Confidence 78899998888765322112346554443 466666666654 44567999999999998877776 4 6
Q ss_pred CCCeEEEcCCcCcchH----HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 214 ENDGILCPIPQYPLYS----ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
+||+|++++|.|.... ..++..|++++.++.+++ ++.+|++++++++++ ++++|++++|+||||.+.+
T Consensus 103 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~- 174 (397)
T TIGR01976 103 PGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSP------RTRLVAVTAASNTLGSIVD- 174 (397)
T ss_pred CCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCC------CceEEEEeCCCCCCCccCC-
Confidence 8999999999887643 455678999999998753 467899999999976 7899999999999999988
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+++|.++|+++|+++|+|+++.. +..+ ..+ .++ ..| +++.|++|.+ |.|+||+++ +
T Consensus 175 --~~~i~~~~~~~~~~~ivD~a~~~----~~~~-~~~----~~~---~~d---~~~~s~~K~~----g~~~G~l~~---~ 230 (397)
T TIGR01976 175 --LAAITELVHAAGALVVVDAVHYA----PHGL-IDV----QAT---GAD---FLTCSAYKFF----GPHMGILWG---R 230 (397)
T ss_pred --HHHHHHHHHHcCCEEEEehhhhc----cccC-CCH----HHc---CCC---EEEEechhhc----CCceEEEEE---c
Confidence 99999999999999999999742 2111 121 112 233 5678999976 457999988 8
Q ss_pred HHHHHHHHHhhh-c----------cccCChHHHHHH---HHHcCCCCC-CC-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 370 AEVREQIYKVAS-V----------NLCSNISGQILA---SLVMSPPKV-GD-ESYESYCAERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 370 ~~~~~~l~~~~~-~----------~~~~~~~~q~a~---~~~L~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L 433 (533)
+++++.+..... . ..+++.....++ ...+..... .. .......+..+.+.++..+.++++++.|
T Consensus 231 ~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L 310 (397)
T TIGR01976 231 PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGL 310 (397)
T ss_pred HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 888877654321 0 012232332222 222221100 00 0001111124566777788888999999
Q ss_pred hcCCCceEecC-----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCC--------CCCCCc
Q 009517 434 NSLEGITCNKA-----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFG--------QVPGTW 500 (533)
Q Consensus 434 ~~~~g~~~~~~-----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~--------~~~g~~ 500 (533)
+++++++++.+ .+++..+ .+. . . +...++ +.|.++||.+..|..+. .+...+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~----------~-~~~~l~-~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~ 375 (397)
T TIGR01976 311 SDLPGVTLYGVARLAARVPTVSF-TVH--G----------L-PPQRVV-RRLADQGIDAWAGHFYAVRLLRRLGLNDEGG 375 (397)
T ss_pred hcCCCEEEeCCCCccCCCceEEE-EeC--C----------c-CHHHHH-HHHHHCCeEEEeCccchHHHHHHhCCCCCCC
Confidence 98866888764 4554332 222 1 1 123333 55677899999886653 122334
Q ss_pred eEEEEec--CCcCcHHHHHHHH
Q 009517 501 HFRCTIL--PQEDKIPAIVTRL 520 (533)
Q Consensus 501 ~iRis~~--~~~e~i~~~~~~l 520 (533)
+||||+. .++++++++++.|
T Consensus 376 ~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 376 VVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred eEEEEeeccCCHHHHHHHHHhC
Confidence 8999995 7888898888764
No 152
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=3.1e-25 Score=226.32 Aligned_cols=330 Identities=13% Similarity=0.111 Sum_probs=215.6
Q ss_pred CCHHHHHHHHHHHhcCCCCCc-cccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC
Q 009517 140 FSADSIERAWQILDQIPGRAT-GAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~-~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
+.+.+++++.+......+.+. .+... ..-..++++++|++++ . +++++|+|+++++..++..++ .+|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~i~~~~g~t~al~~~l~~~~-~~g 83 (361)
T cd06452 13 LTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG------M--DEARVTPGAREGKFAVMHSLC-EKG 83 (361)
T ss_pred CCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC------C--ceEEEeCCHHHHHHHHHHHhc-CCC
Confidence 367788887776643222111 11111 1125688888888864 2 789999999999999999998 799
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc-CCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~-g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
|+|+++.++|......+...|++++.++.+.+.+|.+|++.+++++++..+. ++++++|++++|+||||...+ +++
T Consensus 84 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~ 160 (361)
T cd06452 84 DWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKK 160 (361)
T ss_pred CEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHH
Confidence 9999999988777677888999999999987656899999999999753211 236899999999999998866 889
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
|+++|+++|+++|+|++|.. +..+ .+.. ++ ..+ +++.|+||++ + ++.|+||+++ ++++++
T Consensus 161 i~~~~~~~~~~vivD~a~~~----g~~~-~~~~----~~---~~d---~~~~s~~K~l-~-~~~~~G~l~~---~~~~~~ 220 (361)
T cd06452 161 IAKVCHEYGVPLLLNGAYTV----GRMP-VSGK----EL---GAD---FIVGSGHKSM-A-ASAPIGVLAT---TEEWAD 220 (361)
T ss_pred HHHHHHHcCCeEEEECCccc----CCcC-CCHH----Hc---CCC---EEEecCCccc-c-CCCCeEEEEE---CHHHHH
Confidence 99999999999999999974 2111 1111 11 223 7899999999 5 4569999998 888888
Q ss_pred HHHHhhhc------c---ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec--
Q 009517 375 QIYKVASV------N---LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-- 443 (533)
Q Consensus 375 ~l~~~~~~------~---~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-- 443 (533)
.+.+.... . .+.....+.++.+.+. ...+.++.. .+..++++++++.|++++|++++.
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~~~~~-~~~~~~~~~l~~~L~~l~g~~v~~~~ 289 (361)
T cd06452 221 IVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP----------HVKERVKRW-DEEVEKARWFVAELEKIEGIKQLGEK 289 (361)
T ss_pred HHhccccccccceeeeeccccCchHHHHHHHHHH----------HHHHHHHHH-HHHHHHHHHHHHHHhcCCCeEEECCC
Confidence 87654321 0 1111122333333331 112222222 222344578999999998988762
Q ss_pred -CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHH
Q 009517 444 -AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLT 521 (533)
Q Consensus 444 -~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~ 521 (533)
...++ +.++.+ .........+ .....+. +.|.++||.+.+ .+ ..+++|++.. .++++++.++++|+
T Consensus 290 ~~~~n~-~~~~~~---~~~~~~~~~~-~~~~~~~-~~L~~~gI~~~~---~~---~~~~~ri~~~g~~~e~~~~l~~al~ 357 (361)
T cd06452 290 PKNHDL-MFFETP---SFDEIAKKHK-RRGYFLY-SELKKRGIHGIK---PG---LTRYFKLSTYGLTWEQVEYVVDAFK 357 (361)
T ss_pred CCCCce-EEEEcC---Ccchhhhhcc-ccchhHH-HHHHHcCceEEc---CC---CceEEEEEecCCCHHHHHHHHHHHH
Confidence 23333 332222 1100000000 1112334 445667998532 11 1238999994 68899999999988
Q ss_pred HHH
Q 009517 522 DFH 524 (533)
Q Consensus 522 ~~l 524 (533)
+++
T Consensus 358 ~~~ 360 (361)
T cd06452 358 EIA 360 (361)
T ss_pred HHh
Confidence 654
No 153
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=1.3e-25 Score=232.61 Aligned_cols=323 Identities=14% Similarity=0.146 Sum_probs=226.5
Q ss_pred CHHHHHHHHHHHhcCCCCC-ccccC----CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh---cc
Q 009517 141 SADSIERAWQILDQIPGRA-TGAYS----HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---IR 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~-~~~Y~----~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---~~ 212 (533)
|..+++++.+.+....... ...|. -..-..++|+++|++++. .++++|++|+|+++++..+++.+ ..
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t~g~t~~l~~~~~~~~~~~~ 110 (406)
T PRK09295 36 PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFVRGTTEGINLVANSWGNSNV 110 (406)
T ss_pred CHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEeCCHHHHHHHHHHHhhhhcC
Confidence 7889999888776422100 11111 012256788888888752 14689999999999999998864 22
Q ss_pred CCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 213 SENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
++||+|+++++.|++ +...++..|++++.++.+. ++.+|++++++++++ ++++|++++|+||||.+++
T Consensus 111 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~ 182 (406)
T PRK09295 111 RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDE------RTRLLAITHVSNVLGTENP 182 (406)
T ss_pred CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCC------CcEEEEEecchhcccccCC
Confidence 689999999988764 4455667899999999874 457899999999976 7999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|.++|+++|+++|+|++|..... + .++. ++ ..| +++.|++|.+ |++| +||+++
T Consensus 183 ---~~~i~~~~~~~~~~vivD~a~~~g~~----~-~~~~----~~---~~D---~~~~s~~K~~-gp~G--~G~l~~--- 238 (406)
T PRK09295 183 ---LAEMIALAHQHGAKVLVDGAQAVMHH----P-VDVQ----AL---DCD---FYVFSGHKLY-GPTG--IGILYV--- 238 (406)
T ss_pred ---HHHHHHHHHHcCCEEEEEcccccCcc----c-cCch----hc---CCC---EEEeehhhcc-CCCC--cEEEEE---
Confidence 88899999999999999999965221 1 1211 11 234 7789999966 7666 799887
Q ss_pred CHHHHHHHHHhhh-----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHH
Q 009517 369 SAEVREQIYKVAS-----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLAR 424 (533)
Q Consensus 369 ~~~~~~~l~~~~~-----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~ 424 (533)
++++++.+..... ...+++..+..++..+++ .+.+ ..+.+.++.++
T Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~----------~~~~~g~~~i~~~~~~ 308 (406)
T PRK09295 239 KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALD----------YVSALGLNNIAEYEQN 308 (406)
T ss_pred chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHH----------HHHHhCHHHHHHHHHH
Confidence 7777665532100 112455666666666653 1112 24567777888
Q ss_pred HHHHHHHHHhcCCCceEecCC--ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-----C
Q 009517 425 RAKTLEDAFNSLEGITCNKAE--GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-----P 497 (533)
Q Consensus 425 ~~~~l~~~L~~~~g~~~~~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-----~ 497 (533)
.++++.+.|++++|++++.+. .+++.|. ++ . . ....+ ...|.++||.+..|..+... .
T Consensus 309 l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~-~~--~----------~-~~~~~-~~~L~~~gI~v~~g~~c~~~~~~~~~ 373 (406)
T PRK09295 309 LMHYALSQLESVPDLTLYGPQNRLGVIAFN-LG--K----------H-HAYDV-GSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCceEEEEE-EC--C----------c-CHHHH-HHHHHhCCeEEeccccchHHHHHHHC
Confidence 889999999998888887653 5555542 22 1 1 12233 35678899999998755311 0
Q ss_pred CCceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 498 g~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
..+++|+|+. .+++||+.+++.|+++.+
T Consensus 374 ~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 374 VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 1238999997 888999999999988643
No 154
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.95 E-value=3.5e-26 Score=235.59 Aligned_cols=349 Identities=13% Similarity=0.114 Sum_probs=234.8
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.|+++ +||+..|.... .+... ++++++++.+++.+.
T Consensus 20 ~~~~~~G~~l~d~dG~~------ylD~~~g~~~~--------------------~lGh~------~p~v~~a~~~~~~~~ 67 (397)
T TIGR03246 20 IPVRGEGSRVWDQQGKE------YIDFAGGIAVN--------------------ALGHA------HPELVKALIEQADKL 67 (397)
T ss_pred eEEEeecCEEEeCCCCE------EEECCcCHhhc--------------------cCCCC------CHHHHHHHHHHHHhc
Confidence 55667777766667777 88886664221 01221 689999999998863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
... ...|. .+....+++.+.+..+ .+.++++++|++|++.+++.++.. +| ++|+..+-+|++.
T Consensus 68 ~~~-~~~~~-----~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~ 137 (397)
T TIGR03246 68 WHI-GNGYT-----NEPVLRLAKKLVDATF----ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGR 137 (397)
T ss_pred ccc-cCccC-----CHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCc
Confidence 210 11222 2333344444443322 468999999999999999987311 23 6788888889887
Q ss_pred HHHHHH-hCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC-CHHHHHH
Q 009517 229 SASIAL-HGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRA 294 (533)
Q Consensus 229 ~~~~~~-~g~~------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~-s~~~l~~ 294 (533)
...... .+.. +..++ ..|++.+++.+.+ ++++|+++.+++++|+.. +.+.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~ 204 (397)
T TIGR03246 138 TLFTVSVGGQPKYSQGFAPLPGGIKHAP-------YNDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKG 204 (397)
T ss_pred cHHHHHhcCCcccccCCCCCCCceEEeC-------CCCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHH
Confidence 543333 2321 11121 1278999998865 788999887777778654 8899999
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
|.++|++||+++|+||+|+++.+.|. ...... ..+ .+| +.+|||.+ | .|+|+||+++ ++++++
T Consensus 205 l~~lc~~~g~llI~DEv~tG~Gr~G~--~~a~~~--~gv---~pD-----i~t~~K~l-g-gG~pigav~~---~~~i~~ 267 (397)
T TIGR03246 205 LRELCDRHNALLIFDEVQTGVGRTGE--LYAYMH--YGV---TPD-----ILTSAKAL-G-GGFPIGAMLT---TTEIAA 267 (397)
T ss_pred HHHHHHHcCCEEEEechhhcCCcccc--chhhhh--cCC---CCC-----EEEeehhh-h-CCcceeEEEE---cHHHHH
Confidence 99999999999999999999866553 222111 122 466 45899999 5 6999999998 899988
Q ss_pred HHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCceeE
Q 009517 375 QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEGAMY 449 (533)
Q Consensus 375 ~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~gg~~ 449 (533)
.+..... .+++.++++++++.+.|+. .+ .+++.++++++.+++.+.|+++ +-+..+++.|.++
T Consensus 268 ~~~~~~~~~t~~~~p~~~aaa~a~l~~-----------~~-~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~ 335 (397)
T TIGR03246 268 HLKVGTHGTTYGGNPLACAVAGKVLDL-----------VN-TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLI 335 (397)
T ss_pred hccCCCcCCCCCCCHHHHHHHHHHHHH-----------Hh-hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEE
Confidence 8865433 5678899999998888741 11 2456778888888999988876 1244566677665
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+. +..+.. .....++. .|.++||++.+. +.+++|+++ .+++++|++++++|+++++++
T Consensus 336 ~i~-~~~~~~----------~~~~~~~~-~l~~~Gv~~~~~-------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 336 GAV-LTEAYQ----------GKAKQFVN-AAAEEGVIALIA-------GPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred EEE-EcCchh----------hHHHHHHH-HHHHCCeEEeec-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 432 221100 01234444 455689998862 224899966 489999999999999988764
No 155
>PLN00144 acetylornithine transaminase
Probab=99.95 E-value=2.1e-26 Score=235.36 Aligned_cols=325 Identities=12% Similarity=0.058 Sum_probs=212.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE------ 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~------ 214 (533)
++++++++.+++.+... +... ...+....+|+.+.+.. ..++|+++++|++|++.+++..+...
T Consensus 33 ~p~v~~ai~~q~~~~~~-----~~~~-~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~ 102 (382)
T PLN00144 33 DPDWVKAVAEQAGTLAH-----VSNV-YHTIPQVELAKRLVASS----FADRVFFCNSGTEANEAAIKFARKYQRVRAPD 102 (382)
T ss_pred CHHHHHHHHHHHHhcCC-----cccc-ccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHHHHHHHHHHHHHHhccCCC
Confidence 68999999999986322 1111 11233445566555432 24699999999999999999875211
Q ss_pred --------CCeEEEcCCcCcchHHHHHHhCCeE-EE---EecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 009517 215 --------NDGILCPIPQYPLYSASIALHGGTL-VP---YYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPG 280 (533)
Q Consensus 215 --------gd~Vlv~~p~~~~~~~~~~~~g~~~-~~---v~~~~~~~~--~ld~~~l~~~i~~~~~~g~~~~~iil~~p~ 280 (533)
..+|+....+|++....+....... .. .|..+.-.+ --|++.+++.+... ++++||++..+
T Consensus 103 ~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-----~~aavi~eP~q 177 (382)
T PLN00144 103 KKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG-----KTAAVFVEPVQ 177 (382)
T ss_pred CccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC-----CeEEEEEcccc
Confidence 2479999999999775554432211 00 110000000 12789998888532 68888888669
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe
Q 009517 281 NPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (533)
Q Consensus 281 NPtG~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r 359 (533)
||+|+. ++.+.+++|.++|++||+++|+||+|++|.+.|. . .+. . ...+ .|| +.||||+++ +|+|
T Consensus 178 ~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~-~-~~~-~-~~~~---~PD-----i~t~sK~l~--~G~p 243 (382)
T PLN00144 178 GEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY-L-WAH-E-AYGV---EPD-----IMTLAKPLA--GGLP 243 (382)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-H-hhh-h-hcCC---CCC-----EEEeccccc--CCcc
Confidence 996653 3566699999999999999999999999877653 1 111 1 1222 677 789999994 6999
Q ss_pred eEEEEEecCCHHHHHHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009517 360 GGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG 438 (533)
Q Consensus 360 iG~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 438 (533)
+||+++ ++++++.+.... ..+++.++++++++.+.|+-.. +. .+.++++.+.+.+ ++.+.+.+.+.|.
T Consensus 244 ig~v~~---~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~--~~---~~~~~~~~~g~~l---~~~l~~~~~~~~~ 312 (382)
T PLN00144 244 IGAVLV---TEKVASAINPGDHGSTFAGGPLVCNAALAVLDKIS--KP---GFLASVAKKGEYL---RELLRRKLGGNPH 312 (382)
T ss_pred eEEEEE---cHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh--hc---hHHHHHHHHHHHH---HHHHHHHHhhCCC
Confidence 999998 999998876433 3678899999999986653110 00 1222233333333 2233444444444
Q ss_pred ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHH
Q 009517 439 ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAI 516 (533)
Q Consensus 439 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~ 516 (533)
+..+.. .|+++|+.+..+ ...++ ..+.++||.+.|+.. .+.|||++. .++++|+++
T Consensus 313 ~~~vrg-~G~~~~l~l~~~--------------~~~~~-~~~~~~Gv~i~~~~~------~~~lrl~p~~~~~~~~i~~~ 370 (382)
T PLN00144 313 VKEVRG-VGLLVGIQLDVP--------------AGPLV-DACRDSGLLVLTAGK------GDVVRLVPPLVISEAELEQA 370 (382)
T ss_pred ceeeec-CceEEEEEecCc--------------cHHHH-HHHHHCCeEEeecCC------CCEEEEeCCCccCHHHHHHH
Confidence 444555 678899766311 22333 445679999998621 248999995 788999999
Q ss_pred HHHHHHHHHHH
Q 009517 517 VTRLTDFHKNF 527 (533)
Q Consensus 517 ~~~l~~~l~~~ 527 (533)
+++|++++.++
T Consensus 371 ~~~l~~~l~~~ 381 (382)
T PLN00144 371 VEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHhc
Confidence 99999998764
No 156
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=1.9e-26 Score=238.46 Aligned_cols=367 Identities=16% Similarity=0.121 Sum_probs=242.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 25 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~ql~~~ 72 (421)
T PRK06777 25 YAERAENATLWDVEGRE------YIDFAAGIAVL----------------------NTGHR----HPKVVAAVRQQLDQF 72 (421)
T ss_pred eEEeeecCEEEeCCCCE------EEEcccCHHhh----------------------ccCCC----CHHHHHHHHHHHhhc
Confidence 45556666666777777 78876554221 11111 688999999999874
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. ..+... ..+....+|+.+...... ...++++++++|++|++.+++..+...| .+|+....+|++....+..
T Consensus 73 ~~---~~~~~~--~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s 146 (421)
T PRK06777 73 TH---TAYQIV--PYASYVTLAERINALAPI-DGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMA 146 (421)
T ss_pred cc---cccccc--CChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHh
Confidence 21 112110 122333455555433210 1246899999999999999998863344 5799999999998755543
Q ss_pred h-CCe-------------EEEEecCCCCCCC----CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHH
Q 009517 235 H-GGT-------------LVPYYLDEATGWG----LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAI 295 (533)
Q Consensus 235 ~-g~~-------------~~~v~~~~~~~~~----ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i 295 (533)
. +.. +..++.... ..+ -+++.+++.++.. ..+.++.+|+++..++..|+ +++++.+++|
T Consensus 147 ~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l 224 (421)
T PRK06777 147 LTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSAL 224 (421)
T ss_pred hcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHH
Confidence 3 211 111111110 011 1356677777531 01236788888877888886 6889999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
.++|++||+++|+||+|++|.++|. +.++..+ ++ .+| +.+|||.+ + +|+|+||+++ ++++++.
T Consensus 225 ~~lc~~~g~llI~DEv~tg~gr~g~--~~~~~~~--~~---~pD-----iv~~sK~l-~-~G~pigav~~---~~~i~~~ 287 (421)
T PRK06777 225 RTLCDEHGILLIADEVQTGFARTGK--LFAMEYY--DV---KPD-----LITMAKSL-G-GGMPISAVVG---RAEVMDA 287 (421)
T ss_pred HHHHHHcCCEEEEechhhCCccCCc--hhhhhhc--CC---CCC-----EEeeehhh-c-CCCceEEEEE---cHHHHhc
Confidence 9999999999999999999877653 2222221 22 466 44799999 5 7999999998 8999888
Q ss_pred HHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCceeEE
Q 009517 376 IYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEGAMYL 450 (533)
Q Consensus 376 l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~gg~~~ 450 (533)
+..... .++++++++++++.++|+ ..++ +.+.++++++.+++++.|+++ +.+..+++.|.|+.
T Consensus 288 ~~~~~~~~T~~~~p~~~aaa~a~L~-----------~~~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~ 355 (421)
T PRK06777 288 PAPGGLGGTYAGNPLAVAAALAVLD-----------VIAE-EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVA 355 (421)
T ss_pred cCCCCCCCCCCcCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEE
Confidence 765433 678899999999999984 1222 456777888888888888774 55677899999987
Q ss_pred ecccCCCHHHHHHHHhcCCCCh--HHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPD--AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~ 525 (533)
+- +..+.. +..+. ...+...+.++||++.|+..|+. ++||++ ..++++|++++++|++++.
T Consensus 356 i~-~~~~~~--------~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~-----~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 356 VE-FNDPQT--------GKPSPEFTRQYQRQALEEGLLLLSCGVHGN-----VIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EE-EecCcc--------CCccHHHHHHHHHHHHhCCeEEeecCCCCC-----EEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 51 221110 00011 11122335569999999877652 899999 4899999999999998874
No 157
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.95 E-value=2.9e-25 Score=229.75 Aligned_cols=328 Identities=16% Similarity=0.127 Sum_probs=221.7
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCC
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd 216 (533)
++++++++.+++.+..... ...|....-..+|++++|++++ .+..+++++|++|+..++..+.. .+++
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~sG~~an~~ai~~l~~~~~~~ 132 (402)
T TIGR01821 61 HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFTSGYVANDATLATLAKIIPGC 132 (402)
T ss_pred CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEECchHHHHHHHHHHhhCCCCCC
Confidence 6889999999987643200 1112223335677788877763 23456666678999999988761 2566
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
.|+.....|......+...|.++..++. .|++++++.++... ..++++|++++|+||||.+.+ +++|.
T Consensus 133 ~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~---l~~i~ 200 (402)
T TIGR01821 133 VIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAP---IEEIC 200 (402)
T ss_pred EEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC---HHHHH
Confidence 6666555665565667777877655542 37788888886421 125789999999999999998 89999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+||+|....++... ..+... ..+ .++ ..|+++||||++ |++| ||+++ ++++++.+
T Consensus 201 ~l~~~~~~~livDea~~~G~~g~~g--~g~~~~-~~~---~~~-~div~~t~sKa~-g~~G---G~i~~---~~~~~~~l 266 (402)
T TIGR01821 201 DLADKYGALTYLDEVHAVGLYGPRG--GGIAER-DGL---MHR-IDIIEGTLAKAF-GVVG---GYIAA---SRKLIDAI 266 (402)
T ss_pred HHHHHcCCEEEEeCcccccccCCCC--Cccchh-ccC---CCC-CeEEEEechhhh-ccCC---ceeec---CHHHHHHH
Confidence 9999999999999999844442211 111110 111 111 247789999999 6667 88887 88999888
Q ss_pred HHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 377 YKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 377 ~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
..... .+.+.++..++++.++|+. .+....+++++.++++++.+.|+++ |+.++.+.+++..+ .
T Consensus 267 ~~~~~~~~~t~~~~~~~~aaa~aaL~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~i-~ 333 (402)
T TIGR01821 267 RSYAPGFIFTTSLPPAIAAGATASIRH-----------LKESQDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHIVPV-I 333 (402)
T ss_pred HHhCcCceecCcCCHHHHHHHHHHHHH-----------hhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEE-E
Confidence 76543 2345677778877777742 1212344556678888999999988 88877777775433 2
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+..+. ....+...+++++||.+.+......+.+..++||++. +++++|++++++|+++++++
T Consensus 334 ~~~~~------------~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 334 IGDAA------------LCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred eCCHH------------HHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 32111 1234555666678999998654443345568999995 89999999999999988754
No 158
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=9.5e-26 Score=233.44 Aligned_cols=344 Identities=16% Similarity=0.138 Sum_probs=225.3
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++....+++.+..+ ....++++++|.|++ + ++.+++++..+. .
T Consensus 4 ~~~~~~~~~~~~~~-----~~~~~~~l~~g~~~~----------------------~--------~p~~~~~~~~~~-~- 46 (398)
T cd00613 4 VLRHLKRLASKNKA-----LDQSMSFLGSGTYKH----------------------N--------PPAVIKRNILEN-E- 46 (398)
T ss_pred HHHHHHHHHhcCcC-----cccCcccccccccCC----------------------c--------CcHHHHHHhccc-c-
Confidence 44555555443332 223479999999985 3 355555544433 2
Q ss_pred CCCCccccCC-----CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHhccCC--CCeEEEcCCcCcc
Q 009517 156 PGRATGAYSH-----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIRSE--NDGILCPIPQYPL 227 (533)
Q Consensus 156 ~~~~~~~Y~~-----~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~~~~l~~~~--gd~Vlv~~p~~~~ 227 (533)
....|.+ ..|..++++++++++.+.+|. +.++++++++++ ++...++.++. .+ ||+|++++|.|+.
T Consensus 47 ---~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~g~~~~~~~~~~~~~-~~~~gd~Vl~~~~~h~~ 120 (398)
T cd00613 47 ---FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDEATAAAEAAGLAAIR-AYHKRNKVLVPDSAHPT 120 (398)
T ss_pred ---CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCchHHHHHHHHHHHHh-cccCCCEEEEcCccCcc
Confidence 1345665 789999999999999998884 445777777555 44444444444 55 9999999999999
Q ss_pred hHHHHHHhC----CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 228 YSASIALHG----GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 228 ~~~~~~~~g----~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
+...+...| ++++.+++++ ++.+|++++++++.+ ++++|++++|+ |||.+. +.+++|+++|++||
T Consensus 121 ~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g 189 (398)
T cd00613 121 NPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSE------EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAG 189 (398)
T ss_pred hHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCC------CeEEEEEECCC-CCceec--chHHHHHHHHHhcC
Confidence 999888888 8999888864 347899999999865 79999999985 899994 45799999999999
Q ss_pred CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC----CCeeEEEEEecCCHHHHHHHHHh
Q 009517 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC----GKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 304 ~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~----G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
+++|+|+++....... .. ..+ ..| +++.|++|++ + | |+++||+.. ++++++.+...
T Consensus 190 ~~livD~~~~~~~~~~-----~~----~~~---~~d---~~~~s~~K~~-~-p~g~Ggp~~g~l~~---~~~~~~~~~~~ 249 (398)
T cd00613 190 ALVYVDGDNLNLTGLK-----PP----GEY---GAD---IVVGNLQKTG-V-PHGGGGPGAGFFAV---KKELVRFLPGR 249 (398)
T ss_pred CEEEEEeccccccCCC-----Ch----HHc---CCC---EEEeeccccC-C-CCCCCCCceeEEEE---hhhhHhhCCCC
Confidence 9999999875422111 00 011 234 8899999986 3 4 799999998 77777654110
Q ss_pred ------------------------------hhccccCChHHH-HHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 009517 380 ------------------------------ASVNLCSNISGQ-ILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428 (533)
Q Consensus 380 ------------------------------~~~~~~~~~~~q-~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (533)
...++..++... .+...++... .+.++++++++++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~----------~~g~~~~~~~~~~~~~~ 319 (398)
T cd00613 250 LVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG----------PEGLKEIAERAHLNANY 319 (398)
T ss_pred eeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC----------HHHHHHHHHHHHHHHHH
Confidence 011122222333 3332222111 12356678889999999
Q ss_pred HHHHHhcCCCceEecCCceeE--EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 429 LEDAFNSLEGITCNKAEGAMY--LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 429 l~~~L~~~~g~~~~~~~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
+++.|++++++. .+.+.++ ++++++.+.+. +...++.. |.++||.+.... ..+.+.+|+++
T Consensus 320 l~~~L~~~~~~~--~~~~~~~~~v~~~~~~~~~~----------~~~~~~~~-L~~~gi~~~~~~----~~~~~~lRis~ 382 (398)
T cd00613 320 LAKRLKEVGGVL--PFNGPFFHEFVLRLPPLYGI----------RAEDLAKA-LIDGGFHAPTMY----LPVDGTLMIEP 382 (398)
T ss_pred HHHHHHhcCCcc--cCCCCeeEEEEEEcCCcchH----------HHHHHHHh-hhhcCccccccc----cCCCCeEEEEc
Confidence 999999884443 2333444 34333311010 13344444 456798764311 12334899999
Q ss_pred c--CCcCcHHHHHHHH
Q 009517 507 L--PQEDKIPAIVTRL 520 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l 520 (533)
. +++++|+++++.|
T Consensus 383 ~~~~t~edid~~~~~L 398 (398)
T cd00613 383 TETETKEELDALLEAL 398 (398)
T ss_pred CCCCCHHHHHHHHHhC
Confidence 5 8899999988764
No 159
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.95 E-value=1.2e-25 Score=234.71 Aligned_cols=374 Identities=13% Similarity=0.099 Sum_probs=234.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++.+++++.+++.+.
T Consensus 39 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~~ 86 (451)
T PRK06918 39 FAQSANGALVTDVDGNQ------YIDFAGAIGTI----------------------NVGHS----HPKVKEALHKQVDQY 86 (451)
T ss_pred eEEeccccEEEeCCCCE------EEEcCCchhhc----------------------CCCCC----CHHHHHHHHHHHHhc
Confidence 56678888888888888 77776554321 11111 688999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. .....-..+.+..+|+.+....+.. ..+.|+++++|++|++.+++..+...| .+|+....+|++....+..
T Consensus 87 ~~-----~~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls 160 (451)
T PRK06918 87 IH-----TGFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMT 160 (451)
T ss_pred cC-----ccccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhh
Confidence 21 1111112344455566665432211 125899999999999999998863334 6799999999997755443
Q ss_pred hCCe--------------EEEEecCCC--CCCCCC--------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCH
Q 009517 235 HGGT--------------LVPYYLDEA--TGWGLE--------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAE 289 (533)
Q Consensus 235 ~g~~--------------~~~v~~~~~--~~~~ld--------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~ 289 (533)
.... +..+|.... ...++. .+.+++.+.... .+.++.+||++..+.-.|+ +++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~ 239 (451)
T PRK06918 161 MTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSK 239 (451)
T ss_pred hcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCH
Confidence 3211 122222100 001111 123333332110 1225667766655555576 5566
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+.+++|.++|++||+++|+||+|++|.+.|. +.++..+ ++ .+| +.||||.+ + +|+|+||+++ +
T Consensus 240 ~~l~~l~~l~~~~gillI~DEV~tg~gr~g~--~~a~~~~--~v---~pD-----i~t~sK~l-~-~G~pig~v~~---~ 302 (451)
T PRK06918 240 KFVQEVRNICSEHGILFVADEIQTGFARTGK--YFAIEHF--DV---VPD-----LITVSKSL-G-AGVPISGVIG---R 302 (451)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCcCccCc--eehhHhc--CC---CCC-----EEeeehhh-c-CCCccEEEEE---c
Confidence 6699999999999999999999999887663 3333222 11 366 56899999 5 7999999998 8
Q ss_pred HHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecC
Q 009517 370 AEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKA 444 (533)
Q Consensus 370 ~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~ 444 (533)
+++++.+..... .++++++++|+++.++|+.. + .....++.+++++.+.+.|++ .+.+..+++
T Consensus 303 ~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i-----------~-~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg 370 (451)
T PRK06918 303 KEIMDESAPGELGGTYAGSPLGCAAALAVLDII-----------E-KENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRG 370 (451)
T ss_pred HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHH-----------H-HCCHHHHHHHHHHHHHHHHHHHHhhCCCceeecc
Confidence 999888765443 77899999999988877411 0 012223333344444444433 344556788
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCC--hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVP--DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRL 520 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l 520 (533)
.|+|+.|.....+.. ...+ ....+.+.+.++||++.|+..|+ +++||++. +++++|++++++|
T Consensus 371 ~G~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~-----~~lrl~p~l~~t~~~id~~l~~l 437 (451)
T PRK06918 371 LGAMCAFELVQDRKT--------KEPDKTLTANICKEANKRGLLLLSAGTYG-----NVIRVLMPLVITDEQLEEGLTII 437 (451)
T ss_pred ceeEEEEEEccCCCc--------CCCcHHHHHHHHHHHHHCCeEEeecCCCC-----CEEEEECCCccCHHHHHHHHHHH
Confidence 899988754321100 0001 11122344567899999986664 28999994 7899999999999
Q ss_pred HHHHHHHHHH
Q 009517 521 TDFHKNFMDK 530 (533)
Q Consensus 521 ~~~l~~~~~~ 530 (533)
+++++++.++
T Consensus 438 ~~~l~~~~~~ 447 (451)
T PRK06918 438 EESLQACYEK 447 (451)
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 160
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=2.2e-25 Score=232.29 Aligned_cols=324 Identities=16% Similarity=0.189 Sum_probs=224.3
Q ss_pred CHHHHHHHHHHHhcCCCCC--ccccCC---CcccHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHh----
Q 009517 141 SADSIERAWQILDQIPGRA--TGAYSH---SQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLL---- 210 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~--~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l---- 210 (533)
|..+++++.+.+.+..... ...|.. ...+.++|++++++++ . ++++|++|+|+++++..+++.+
T Consensus 45 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~g~t~al~~i~~~~~~~~ 118 (424)
T PLN02855 45 PAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIVFTRNATEAINLVAYTWGLAN 118 (424)
T ss_pred CHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEEeCCHHHHHHHHHHHhhhhc
Confidence 7888888888776432210 111211 1224688889998875 3 3579999999999999998863
Q ss_pred ccCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 211 IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 211 ~~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
+ ++||+|+++.+.|+. +...++..|++++.++++.+ ..+|++++++.+++ ++++|++++++||||.+
T Consensus 119 ~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~ 189 (424)
T PLN02855 119 L-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSE------KTKLVATHHVSNVLGSI 189 (424)
T ss_pred C-CCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhcc------CceEEEEeCcccccccc
Confidence 4 689999999997774 44556677999999998754 36899999999976 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++ +++|+++|+++|+++|+|++|.. +..+ .++ .++ ..| +++.|++|.+ |++| +||+++
T Consensus 190 ~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~-~~~----~~~---~~d---~~~~s~~K~~-gp~G--~G~l~~- 247 (424)
T PLN02855 190 LP---VEDIVHWAHAVGAKVLVDACQSV----PHMP-VDV----QTL---GAD---FLVASSHKMC-GPTG--IGFLWG- 247 (424)
T ss_pred CC---HHHHHHHHHHcCCEEEEEhhhhc----CCcC-CCc----hhc---CCC---EEEeeccccc-CCCc--cEEEEE-
Confidence 99 78899999999999999999953 2211 121 111 234 6799999965 7666 799988
Q ss_pred cCCHHHHHHHHHhhh----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHH
Q 009517 367 GFSAEVREQIYKVAS----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLA 423 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~ 423 (533)
++++++.+..... ...+++..+.+++..+++ .+.+ ..+.++++..
T Consensus 248 --~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~----------~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 248 --KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAID----------YLSEIGMDRIHEYEV 315 (424)
T ss_pred --chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHH----------HHHHhCHHHHHHHHH
Confidence 7777766543210 011234444444444442 1111 3566777888
Q ss_pred HHHHHHHHHHhcCCCceEecCC-------ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHcc-ceEEEcCCCCCC
Q 009517 424 RRAKTLEDAFNSLEGITCNKAE-------GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNAT-GIVLVPGSGFGQ 495 (533)
Q Consensus 424 ~~~~~l~~~L~~~~g~~~~~~~-------gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gV~v~pg~~f~~ 495 (533)
+.++++++.|++++|++++.+. +++..+ .++ . . ....+. ..|.++ ||.+..|..+..
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~-~~~--~----------~-~~~~v~-~~L~~~~gI~v~~g~~c~~ 380 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAF-NVE--G----------I-HPTDLS-TFLDQQHGVAIRSGHHCAQ 380 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEE-EEC--C----------c-CHHHHH-HHhcccCCEEEechhhhhH
Confidence 8899999999988898887542 344433 232 1 1 123333 445445 999998875421
Q ss_pred C-----CCCceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 496 V-----PGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 496 ~-----~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
. .-.+++|||+. .+++||+++++.|+++++.++
T Consensus 381 ~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 381 PLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred HHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 11238999996 889999999999999988754
No 161
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=5.3e-25 Score=228.28 Aligned_cols=328 Identities=16% Similarity=0.120 Sum_probs=219.6
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCC
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd 216 (533)
++++++++.+++.+.... ....|.+..-..+|++++|++++ . ++.+++++ |.++...++..+.. .+++
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g------~-~~~~~~~s-G~~an~~ai~~l~~~~~~~ 133 (407)
T PRK09064 62 HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG------K-EAALVFTS-GYVSNDATLSTLAKLIPDC 133 (407)
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC------C-CcEEEECc-HHHHHHHHHHHHhCCCCCC
Confidence 688999998888764210 01223334446778888888763 1 33445444 55787777777651 2566
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
.|+.....|......+...|.++..++. .|++++++.++.. ..+++++|++++++||+|.+.+ +++|.
T Consensus 134 ~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~--~~~~~~~v~~~~v~s~~G~~~~---l~~i~ 201 (407)
T PRK09064 134 VIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAA--DPDRPKLIAFESVYSMDGDIAP---IAEIC 201 (407)
T ss_pred EEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhc--cCCCCeEEEEeCCCCCCccccC---HHHHH
Confidence 5655555565565666777777655542 3788888888642 1126789999999999999988 99999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|+++|+++|+||+|....|+... ..+... .++ . +...|+++||||+| |++| ||+++ ++++++.+
T Consensus 202 ~l~~~~~~~livDEa~~~G~~g~~g--~g~~~~-~~~---~-~~~div~~t~sKa~-g~~G---G~~~~---~~~~~~~l 267 (407)
T PRK09064 202 DLADKYNALTYLDEVHAVGMYGPRG--GGIAER-DGL---M-DRIDIIEGTLAKAF-GVMG---GYIAG---SAALVDAV 267 (407)
T ss_pred HHHHHcCCEEEEECCCcccccCCCC--CChHHh-cCC---C-CCCeEEEEecchhh-hccC---ceEec---CHHHHHHH
Confidence 9999999999999999843343211 111111 111 1 11357889999999 6666 99887 88998888
Q ss_pred HHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 377 YKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 377 ~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
..... .+.+.++..+.++.+.|+ +.+.....+++++++++++.+.|+++ |++++.+.+++. ++.
T Consensus 268 ~~~~~~~~~t~~~~~~~~~aa~~al~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~iv-~i~ 334 (407)
T PRK09064 268 RSYAPGFIFTTSLPPAIAAAALASIR-----------HLKESNEERERHQERAAKLKAALDAA-GIPVMPNESHIV-PVM 334 (407)
T ss_pred HHhCccccccCcCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEE-EEE
Confidence 76543 133556667777666663 22222344677888999999999987 888777666543 433
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+..+. ....+..++++++||.+.+...+..+.+..++||++. ++++++++++++|+++++++
T Consensus 335 ~~~~~------------~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 335 VGDPE------------KCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred eCCHH------------HHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 32111 1234455666677999998654443345568999995 78999999999999988765
No 162
>PLN02624 ornithine-delta-aminotransferase
Probab=99.95 E-value=6.4e-26 Score=237.47 Aligned_cols=363 Identities=12% Similarity=0.098 Sum_probs=234.4
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
.++.++++...++.|+++ ++||..|.-.. ..+++ ++++++++.+++.+
T Consensus 59 ~~~~~a~G~~l~d~dG~~------ylD~~sg~~~~----------------------~~Gh~----~p~v~~ai~~ql~~ 106 (474)
T PLN02624 59 VVFSRAKGSRIWDPEGKK------YLDFLSAYSAV----------------------NQGHC----HPKIIKALTEQAEK 106 (474)
T ss_pred ceEEeeeeCEEEECCCCE------EEEcccchhcc----------------------cCCCC----CHHHHHHHHHHHHh
Confidence 356777777777777777 77775553221 11111 68999999999987
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------C-C-CeEEEcCCcC
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-------E-N-DGILCPIPQY 225 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-------~-g-d~Vlv~~p~~ 225 (533)
... ...+.......+|.+.++++. + .+.++++++|++|++.+++..... + + .+|+....+|
T Consensus 107 ~~~--~~~~~~~~~~~~la~~L~~~~----~----~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~y 176 (474)
T PLN02624 107 LTL--SSRAFYNDKFPEFAEYLTSMF----G----YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCF 176 (474)
T ss_pred cCC--cccccCCHHHHHHHHHHHhhc----C----CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCc
Confidence 432 111112223455666665553 2 468999999999999999977520 1 2 3578888889
Q ss_pred cchHHHHHHhCCeEE-EE---ecCCC---CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH-HHHHHHH
Q 009517 226 PLYSASIALHGGTLV-PY---YLDEA---TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVD 297 (533)
Q Consensus 226 ~~~~~~~~~~g~~~~-~v---~~~~~---~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~-~l~~i~~ 297 (533)
++............. .- |..+. -.| -|++.+++.++.. +.++++|+++.++|++|.+++++ .+++|.+
T Consensus 177 HG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~ 252 (474)
T PLN02624 177 HGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEED---GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRE 252 (474)
T ss_pred CCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 887544433321110 00 00000 001 1789999988642 34788999999999999987766 5999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||+++|+||+|.++.++|. ... .++.+..+| +.+|||.+ |.+++++|++++ +++++..+.
T Consensus 253 lc~~~gillI~DEv~tG~GrtG~--~~a-----~~~~~i~pD-----iv~lsK~l-ggG~~pigav~~---~~~i~~~~~ 316 (474)
T PLN02624 253 LCSKHNVLMIADEIQTGLARTGK--MLA-----CDWEEVRPD-----VVILGKAL-GGGVIPVSAVLA---DKDVMLCIK 316 (474)
T ss_pred HHHHcCCEEEEeccccCcCcCcc--hhh-----HHhcCCCCC-----EEEecccc-cCCCCcceeeee---cHHHHhHhc
Confidence 99999999999999998766553 111 122222455 44579999 655699999998 888888776
Q ss_pred Hhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----C-CceEecCCceeEEe
Q 009517 378 KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----E-GITCNKAEGAMYLF 451 (533)
Q Consensus 378 ~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-g~~~~~~~gg~~~~ 451 (533)
+... .+++++++.++++.+.|+.. ++ ..+.++..++.+.+++.|+++ + .+..+++.|.|+.+
T Consensus 317 ~~~~~~T~~g~pl~~aaa~aaLe~l-----------~~-~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i 384 (474)
T PLN02624 317 PGEHGSTFGGNPLASAVAMAALQVV-----------QD-EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAV 384 (474)
T ss_pred cCCcCCCCCCCHHHHHHHHHHHHHH-----------Hh-chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEE
Confidence 5443 66788999999998887421 11 123334444445555555443 3 25556778877663
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.+..+.. +......++.. |.++||++.|+. .+++||++ .+++++|++++++|++++++..
T Consensus 385 -~l~~~~~--------~~~~a~~~~~~-L~e~GV~v~p~~-------~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 385 -VLNSPKL--------GPVSAYDVCLK-LKERGLLAKPTH-------DTIIRLAPPLSISEDELQECSKALSDVLEHDL 446 (474)
T ss_pred -EecCCCc--------ChHHHHHHHHH-HHhCCeEEecCC-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 2332110 00012344444 567999999742 23899997 4899999999999999988754
No 163
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=2.4e-25 Score=226.96 Aligned_cols=319 Identities=15% Similarity=0.142 Sum_probs=215.2
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeE
Q 009517 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGI 218 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~V 218 (533)
.|+.+++++.+.+. ...|.. ..++.+.+.+.+.+.+| .++ +.+++++|+++++..++..++ .+||+|
T Consensus 10 ~~~~v~~a~~~~~~------~~~~~~---~~~~~~~~~~~la~~~g--~~~~~~~~~~~~~t~al~~~~~~~~-~~g~~v 77 (356)
T cd06451 10 VPPRVLKAMNRPML------GHRSPE---FLALMDEILEGLRYVFQ--TENGLTFLLSGSGTGAMEAALSNLL-EPGDKV 77 (356)
T ss_pred CCHHHHHHhCCCcc------CCCCHH---HHHHHHHHHHHHHHHhc--CCCCCEEEEecCcHHHHHHHHHHhC-CCCCEE
Confidence 36777777753321 122221 33334444444444445 333 457788888999999999998 799999
Q ss_pred EEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 219 LCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 219 lv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+++.++|+. +...++..|++++.++.++ ++.+|++++++.+++. ++++|++++|+||||.+++ +++|.
T Consensus 78 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~---~~~i~ 147 (356)
T cd06451 78 LVGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNP---LEGIG 147 (356)
T ss_pred EEecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccC---HHHHH
Confidence 999988765 4667788899999999875 3589999999999753 6899999999999999998 78889
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|+++|+++++|++|.. |..+ .++. .+ ..+ +++.|++|++++ +.++||++. ++++++.+
T Consensus 148 ~~a~~~~~~li~D~~~~~----g~~~-~~~~----~~---~~d---~~~~s~~K~l~~--p~g~G~l~~---~~~~~~~~ 207 (356)
T cd06451 148 ALAKKHDALLIVDAVSSL----GGEP-FRMD----EW---GVD---VAYTGSQKALGA--PPGLGPIAF---SERALERI 207 (356)
T ss_pred HHHHhcCCEEEEeeehhc----cCcc-cccc----cc---Ccc---EEEecCchhccC--CCCcceeEE---CHHHHHHH
Confidence 999999999999998762 2111 1111 11 123 557789999843 346899998 88888777
Q ss_pred HH---hh-----------------hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 377 YK---VA-----------------SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 377 ~~---~~-----------------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
.. .. ....+++...+.++.++++. + ....++.+.++++++++++.+.|.++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~-------l--~~~~~~~~~~~~~~~~~~l~~~L~~~ 278 (356)
T cd06451 208 KKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDL-------I--LEEGLENRWARHRRLAKALREGLEAL 278 (356)
T ss_pred HhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHH-------H--HHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 53 00 01122344444555555421 0 01234567778888899999999988
Q ss_pred CCceEecCC---ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcC
Q 009517 437 EGITCNKAE---GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQED 511 (533)
Q Consensus 437 ~g~~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e 511 (533)
|+.+..+. ++.++|+.++ .+ . +...++..+.+++||.+.||..+. ..++||+|+. .+++
T Consensus 279 -g~~~~~~~~~~~~~~~~~~~~--~~---------~-~~~~~~~~L~~~~gI~~~~g~~~~---~~~~iRis~~~~~~~e 342 (356)
T cd06451 279 -GLKLLAKPELRSPTVTAVLVP--EG---------V-DGDEVVRRLMKRYNIEIAGGLGPT---AGKVFRIGHMGEATRE 342 (356)
T ss_pred -CCeeccCcccCCCceEEEECC--CC---------C-CHHHHHHHHHHhCCEEEecccccc---cCCEEEEecCCCCCHH
Confidence 87775432 3444554333 11 1 234455454443499999987543 2239999996 7889
Q ss_pred cHHHHHHHHHHHHH
Q 009517 512 KIPAIVTRLTDFHK 525 (533)
Q Consensus 512 ~i~~~~~~l~~~l~ 525 (533)
++++++++|+++++
T Consensus 343 ~v~~~~~~l~~~~~ 356 (356)
T cd06451 343 DVLGVLSALEEALK 356 (356)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988763
No 164
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.95 E-value=1.2e-25 Score=232.62 Aligned_cols=326 Identities=11% Similarity=0.090 Sum_probs=210.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------- 212 (533)
++++++++.+++..... . ... . ..+..+.+++.+.+..+ .+.++++++|++|++.+++.++.
T Consensus 49 ~p~v~~a~~~~~~~~~~--~--~~~-~-~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~ 118 (400)
T PTZ00125 49 HPKILAALINQAQKLTL--T--SRA-F-YNDVLGLAEKYITDLFG----YDKVLPMNSGAEAGETALKFARKWGYEVKGI 118 (400)
T ss_pred CHHHHHHHHHHHHhccc--c--ccc-c-cCHHHHHHHHHHHhCCC----CCEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence 68899999988875322 1 111 0 12233444444443333 36899999999999999998741
Q ss_pred -CCCCeEEEcCCcCcchHHHHHHh-CCeEEEEecCC-CCCC----CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 213 -SENDGILCPIPQYPLYSASIALH-GGTLVPYYLDE-ATGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 213 -~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~~v~~~~-~~~~----~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
..+++|+..+-.|++........ +.........+ ..++ ..|++++++.++. .++++|++++++||||.
T Consensus 119 ~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~ 193 (400)
T PTZ00125 119 PENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD-----PNVAAFIVEPIQGEAGV 193 (400)
T ss_pred CCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC-----CCeEEEEEcCccCCCCC
Confidence 12478999999998865443332 22111000000 0000 1389999999862 17999999999999999
Q ss_pred CCC-HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 286 VLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 286 ~~s-~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
+++ .+.+++|.++|++||+++|+||+|.++.++|. ... .+..+..+| +.+|||++ +.+++|+||++
T Consensus 194 ~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~--~~~-----~~~~~~~pd-----~~~~sK~l-~~g~~~ig~v~ 260 (400)
T PTZ00125 194 IVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK--LLA-----HDHEGVKPD-----IVLLGKAL-SGGLYPISAVL 260 (400)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhH-----HHhcCCCCC-----EEEEcccc-cCCCcCcEEEE
Confidence 886 56699999999999999999999998766553 111 111111455 33578999 43346999999
Q ss_pred EecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCc
Q 009517 365 VTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGI 439 (533)
Q Consensus 365 ~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~ 439 (533)
+ ++++++.+..... .+++.+++.+.++.++|+. .+. ....++.+++.+.+++.|+++ +.+
T Consensus 261 ~---~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~-----------i~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 325 (400)
T PTZ00125 261 A---NDDVMLVIKPGEHGSTYGGNPLACAVAVEALEV-----------LKE-EKLAENAQRLGEVFRDGLKELLKKSPWV 325 (400)
T ss_pred E---cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHH-----------HHh-cCHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 8 9999888765433 5678889999888777631 110 123344445555566666543 334
Q ss_pred eEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHH
Q 009517 440 TCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIV 517 (533)
Q Consensus 440 ~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~ 517 (533)
..+.+.|. +.|+.++.+.. .....++.++ .++||.+.|+. .++|||++. .++++|++++
T Consensus 326 ~~~~~~g~-~~~v~~~~~~~----------~~~~~~~~~l-~~~Gv~v~~~~-------~~~lRi~~~~~~~~~~i~~~l 386 (400)
T PTZ00125 326 KEIRGKGL-LNAIVFDHSDG----------VNAWDLCLKL-KENGLLAKPTH-------DNIIRFAPPLVITKEQLDQAL 386 (400)
T ss_pred EEEecccE-EEEEEEccCcc----------hHHHHHHHHH-HHCCeEEeecC-------CCEEEEECCccCCHHHHHHHH
Confidence 44566554 45544442211 0133445555 46899999842 238999974 8999999999
Q ss_pred HHHHHHHHHHH
Q 009517 518 TRLTDFHKNFM 528 (533)
Q Consensus 518 ~~l~~~l~~~~ 528 (533)
++|.++++++.
T Consensus 387 ~~l~~~l~~~~ 397 (400)
T PTZ00125 387 EIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 165
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=6.6e-25 Score=223.55 Aligned_cols=295 Identities=16% Similarity=0.134 Sum_probs=206.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc-Ccc-hHHHHHHhCCeEEEEecCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-YPL-YSASIALHGGTLVPYYLDE 246 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~-~~~-~~~~~~~~g~~~~~v~~~~ 246 (533)
..++|+.++++++ .+-+...|+++.|+++++..++..++ .++|+|++..+. |+. +..+++..|.+++.++.+.
T Consensus 33 ~~~~~~~la~~~~----~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~ 107 (355)
T TIGR03301 33 TDQVRDRLLALAG----GDDNHTCVLLQGSGTFAVEATIGSLV-PRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE 107 (355)
T ss_pred HHHHHHHHHHHhc----CCCCCcEEEEeCCcHHHHHHHHHhcc-CCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC
Confidence 4566677776664 33222368889999999999999998 678887766555 443 4567788899999998864
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccH
Q 009517 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (533)
Q Consensus 247 ~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~ 326 (533)
++.+|++++++++++. ++++.+++++++||||...+ +++|+++|++|++++|+|++++. +..+ .++
T Consensus 108 --~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s~----g~~~-~~~ 173 (355)
T TIGR03301 108 --YEPPDLNRIEEALAAD----PDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSSF----GAIP-IDI 173 (355)
T ss_pred --CCCCCHHHHHHHHHhC----CCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEecccc----CCcc-cch
Confidence 4588999999999752 25677888899999999987 89999999999999999987753 2111 122
Q ss_pred HHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh------------------hccccCCh
Q 009517 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA------------------SVNLCSNI 388 (533)
Q Consensus 327 ~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~------------------~~~~~~~~ 388 (533)
.. + ..+ +++.|++|+++|++| +||+++ ++++++.+.... ...++++.
T Consensus 174 ~~----~---~~d---~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 238 (355)
T TIGR03301 174 EE----L---DVD---ALIASANKCLEGVPG--FGFVIA---RRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPT 238 (355)
T ss_pred hh----c---Ccc---EEEecCCcccccCCc--eeEEEE---CHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcH
Confidence 11 1 123 778999998756566 699998 888887765210 12245666
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCceEecC---CceeEEecccCCCHHHHHH
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTLEDAFNSLEGITCNKA---EGAMYLFPRIQLPEKAIKA 463 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~gg~~~~~~~~~~~~~~~~ 463 (533)
..+.++..+++. ..++ .++..++++++++++++.|+++ |+.++.+ .+++++|+.++....
T Consensus 239 ~~~~a~~~al~~----------~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---- 303 (355)
T TIGR03301 239 HTVYAFAQALEE----------LEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDPD---- 303 (355)
T ss_pred HHHHHHHHHHHH----------HHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCCc----
Confidence 776666666531 1111 4566778889999999999988 8876543 245566654431000
Q ss_pred HHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 464 AEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 464 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
. +... +.+.|.++||.+.||..+. . ++|||++. ++.++++++++.|+++
T Consensus 304 -----~-~~~~-~~~~l~~~gi~i~~~~~~~-~---~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 304 -----F-DFDD-FYQELKERGFVIYPGKLTL-A---DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred -----c-hHHH-HHHHHHHCCEEEECCcccc-c---cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 0 1223 3455677899999987654 2 38999984 6889999999999875
No 166
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=3.6e-25 Score=225.27 Aligned_cols=301 Identities=16% Similarity=0.175 Sum_probs=209.7
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch----HHHHHHh
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALH 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~----~~~~~~~ 235 (533)
...|+.+. ..+|++++|++.+ . +..++++|+++|+..++. ++ .+||+|++++|+|+.. ...+...
T Consensus 46 y~r~~~pt-~~~le~~la~l~g------~--~~~~~~~sG~~ai~~~~~-ll-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 46 YSRTGNPT-RGVLEQAIADLEG------G--DQGFACSSGMAAIQLVMS-LF-RSGDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred ccCCCCch-HHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHHH-Hh-CCCCEEEEecCCcCcHHHHHHHHhhcc
Confidence 34455554 7889999999975 2 335778888999998764 55 6999999999999974 3445568
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|++++.++. .|++.+++++++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|...
T Consensus 115 G~~v~~vd~-------~d~~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~ 178 (366)
T PRK08247 115 NVRFVYVNT-------ASLKAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTP 178 (366)
T ss_pred CceEEEECC-------CCHHHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 999888864 378999999876 7999999999999865 456999999999999999999999532
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhh-ccccCChHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS-VNLCSNISGQIL 393 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~-~~~~~~~~~q~a 393 (533)
.+. .+ + ..+..|++.|+||.++|..+++.|++++ + +++.+.+...+. ...+.+++.+.+
T Consensus 179 ~~~--~p---~-----------~~g~di~i~S~sK~~~g~~d~~~G~iv~---~~~~l~~~~~~~~~~~g~~~s~~~a~l 239 (366)
T PRK08247 179 VLQ--RP---L-----------EEGADIVIHSATKYLGGHNDVLAGLVVA---KGQELCERLAYYQNAAGAVLSPFDSWL 239 (366)
T ss_pred ccc--Cc---h-----------hcCCcEEEeecceeccCCCceeeeEEec---ChHHHHHHHHHHHHhcCCCCChHHHHH
Confidence 221 11 0 0112488999999996555679999887 5 678787776665 445667778877
Q ss_pred HHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE--ecCCceeEEecccCCCHHHHHHHHhcCCCC
Q 009517 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC--NKAEGAMYLFPRIQLPEKAIKAAEAEKTVP 471 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 471 (533)
+...|+ .+....++++++++.+.+.|++.|++.. .++.||+|.| .++. .....+.- ... .
T Consensus 240 ~~~~l~--------------tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~-~~~~~~~~-~~l-~ 301 (366)
T PRK08247 240 LIRGMK--------------TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQD-EEWVNPFL-KSL-K 301 (366)
T ss_pred HHhccC--------------cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECC-HHHHHHHH-HcC-C
Confidence 777664 1233445668899999999999888764 4448999998 4542 11100000 000 0
Q ss_pred hHHHHHHHHHccceEEEcCCCCCCC----------CCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 472 DAFYCRRLLNATGIVLVPGSGFGQV----------PGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 472 ~~~~~~~ll~~~gV~v~pg~~f~~~----------~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
...++..+.....+.+.|+..+... -+.+.+|||+++ |+++.+++.|++++++
T Consensus 302 ~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl--E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 302 LITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI--ENVEDLIADLKQAFKQ 364 (366)
T ss_pred cceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 1111222233456777788655211 113489999996 4578888888888875
No 167
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.95 E-value=1.8e-25 Score=231.64 Aligned_cols=369 Identities=13% Similarity=0.088 Sum_probs=228.8
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 18 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~a~~~ql~~~ 65 (420)
T TIGR00700 18 FAARAEGAILEDVDGNR------LIDFASGIAVL----------------------NIGHS----HPRVVDAVRTQVAEF 65 (420)
T ss_pred eEEeeeeeEEEeCCCCE------EEECccCHHhc----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 45667777777778777 88876664322 11111 689999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. ..+... ..+.+..+|+.+.+... ....++++++++|++|++.+++..+...| .+|+....+|++....+..
T Consensus 66 ~~---~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~ 139 (420)
T TIGR00700 66 TH---TCFMVT--PYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMA 139 (420)
T ss_pred cC---cccccc--CChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHH
Confidence 21 111111 12233345555543321 01236899999999999999998863334 6788899999997654443
Q ss_pred hCCe--------------EEEEecCCCC---------CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC-CHH
Q 009517 235 HGGT--------------LVPYYLDEAT---------GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEE 290 (533)
Q Consensus 235 ~g~~--------------~~~v~~~~~~---------~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~-s~~ 290 (533)
.... +..++..... .+.-+++.+++.+... ..+.++.+||++..+.-+|+++ +++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~ 218 (420)
T TIGR00700 140 LTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKG 218 (420)
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHH
Confidence 3111 1112221000 0000245566665311 1123788888887777788855 555
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
.+++|.++|++||+++|+||+|++|.+.|. ..++.. .+..+| +.+|||++ + +|+|+||+++ ++
T Consensus 219 ~l~~l~~lc~~~gillI~DEV~tg~gr~g~--~~a~~~-----~~~~pD-----i~~lsK~l-~-~G~pig~v~~---~~ 281 (420)
T TIGR00700 219 FVPALLDWCREHGIVFIADEVQTGFARTGA--MFACEH-----EGPEPD-----LITTAKSL-A-DGLPLSGVTG---RA 281 (420)
T ss_pred HHHHHHHHHHHcCCEEEEEecccCCcccch--hHHHhh-----cCCCCC-----EEEeeccc-c-CCcceEEEEe---cH
Confidence 699999999999999999999999877653 222211 111466 55699999 5 7999999998 99
Q ss_pred HHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCceEecCC
Q 009517 371 EVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN----SLEGITCNKAE 445 (533)
Q Consensus 371 ~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~g~~~~~~~ 445 (533)
++++.+..... .+++.++++|+++.+.|+.. + .....++.++..+.+++.|+ ++|.+..+++.
T Consensus 282 ~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l-----------~-~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~ 349 (420)
T TIGR00700 282 EIMDAPAPGGLGGTYAGNPLACAAALAVLAII-----------E-SEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGL 349 (420)
T ss_pred HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHH-----------H-hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeecc
Confidence 99888764433 77899999999998777411 0 01122223333333333333 34556677888
Q ss_pred ceeEEecccCCCHHHHHHHHhcCCC-ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHH
Q 009517 446 GAMYLFPRIQLPEKAIKAAEAEKTV-PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
|.|+ |+.+..+.. ..... ....+ .+.+.++||++.||..|+ ++|||++. .++++|++++++|++
T Consensus 350 G~~~-~i~~~~~~~------~~~~~~~~~~l-~~~~~~~Gv~i~p~~~f~-----~~lRl~p~l~~~~~~l~~~~~~l~~ 416 (420)
T TIGR00700 350 GAMI-AVELVDPGT------TEPDAGLAERI-ATAAHAAGLLLLTCGMFG-----NIIRFLPPLTIGDELLSEGLDILCA 416 (420)
T ss_pred ceEE-EEEEecCCC------CCccHHHHHHH-HHHHHHCCeEEeccCCCC-----CEEEEECCCCcCHHHHHHHHHHHHH
Confidence 6554 544421100 00000 01222 233467999999988775 28999985 689999999999998
Q ss_pred HHH
Q 009517 523 FHK 525 (533)
Q Consensus 523 ~l~ 525 (533)
+++
T Consensus 417 ~l~ 419 (420)
T TIGR00700 417 ILA 419 (420)
T ss_pred Hhh
Confidence 874
No 168
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=2.2e-24 Score=221.75 Aligned_cols=332 Identities=11% Similarity=0.109 Sum_probs=221.0
Q ss_pred CHHHHHHHHHHHhcCCCC----CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 141 SADSIERAWQILDQIPGR----ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
++.+++++.+......+. ....+.......++++.+|++++ .+++++++|+++++..++..++ .+||
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~~g~t~a~~~al~~l~-~~gd 103 (387)
T PRK09331 33 TPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVTHGAREGKFAVMHSLC-KKGD 103 (387)
T ss_pred CHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhc-CCCC
Confidence 688888888877542210 01222223347889999999874 3568899999999999999998 8999
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH-hcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK-AKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~-~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
+|+++.++|......+...|++++.++.+.+.++.+|++.+++++++.. ..++++++|++++|+||||.+.+ +++|
T Consensus 104 ~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I 180 (387)
T PRK09331 104 YVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKV 180 (387)
T ss_pred EEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHH
Confidence 9999999988877778889999999998433467899999999997631 11246899999999999999887 9999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
+++|+++|+++|+|++|.. |..+ .+.. .+ ..| +++.|++|++ + .+.++||+++ ++++++.
T Consensus 181 ~~la~~~g~~livD~a~~~----g~~~-~~~~----~~---g~D---~~~~s~~K~l-~-~~~~~G~l~~---~~~~i~~ 240 (387)
T PRK09331 181 AKVAHEYGIPFLLNGAYTV----GRMP-VDGK----KL---GAD---FIVGSGHKSM-A-ASAPSGVLAT---TEEYADK 240 (387)
T ss_pred HHHHHHcCCEEEEECCccc----CCcC-CCHH----Hc---CCC---EEEeeCcccc-c-CCCCEEEEEE---CHHHHhh
Confidence 9999999999999999974 2111 1111 11 234 7789999998 4 3568999988 8888877
Q ss_pred HHHhhh---------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec---
Q 009517 376 IYKVAS---------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK--- 443 (533)
Q Consensus 376 l~~~~~---------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--- 443 (533)
+.+... ...+.++....++...+. ...+..+ ..++..++.+++++.|++++|++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~----------~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~ 309 (387)
T PRK09331 241 VFRTSRKFGVKEVELLGCTLRGAPLVTLMASFP----------HVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKP 309 (387)
T ss_pred cccccCCCcccceeeeceecCchHHHHHHHHHH----------HHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCc
Confidence 654321 011122222222222221 1222222 33445667778999999998998873
Q ss_pred CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-cCCcCcHHHHHHHHHH
Q 009517 444 AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-LPQEDKIPAIVTRLTD 522 (533)
Q Consensus 444 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~~~~e~i~~~~~~l~~ 522 (533)
...++ +.+ ..| .........+. ....+. +.|+++||...+. .....+|+.. +.+++++++++++|++
T Consensus 310 ~~~~i-~~~--~~~-~~~~~~~~~~~-~~~~~~-~~L~~~gI~~~~~------~~~~i~ri~~~g~t~~di~~l~~aL~~ 377 (387)
T PRK09331 310 RNHDL-MKF--ETP-SFDEIAKKHKR-RGFFLY-EELKKRGIHGIKP------GATKEFKLSTYGLTWEQVEYVADAFKE 377 (387)
T ss_pred CcCCe-EEE--eCC-chhHHhhhccc-cchhHH-HHHHHcCceEEcc------CCceEEEEEeccCCHHHHHHHHHHHHH
Confidence 22333 222 222 11110000011 122333 5556789985431 1223678877 4799999999999998
Q ss_pred HHHHH
Q 009517 523 FHKNF 527 (533)
Q Consensus 523 ~l~~~ 527 (533)
+++++
T Consensus 378 i~~~~ 382 (387)
T PRK09331 378 IAEKY 382 (387)
T ss_pred HHHhc
Confidence 87754
No 169
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=1.4e-25 Score=230.63 Aligned_cols=328 Identities=14% Similarity=0.137 Sum_probs=221.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC----CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc---C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---S 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~----~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~ 213 (533)
|+.+++++.+.+.....+....|.. ..-+.++|+.++++++ .++++|++|+|+++++..++..++. .
T Consensus 13 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~~~g~t~a~~~~~~~~~~~~~~ 86 (381)
T PRK02948 13 SKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG------GEEQGIYFTSGGTESNYLAIQSLLNALPQ 86 (381)
T ss_pred CHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCcHHHHHHHHHHHHHHhccC
Confidence 7889999888776432211111110 1114466677777664 5678999999999999998888751 3
Q ss_pred CCCeEEEcCCcCcch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 214 ENDGILCPIPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
+|+.|++....|+.+ ...++..|+++..+++++ ++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 87 ~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~-- 156 (381)
T PRK02948 87 NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQP-- 156 (381)
T ss_pred CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehh--
Confidence 689999988666654 445566799999999874 457899999999875 7899999999999999998
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+++|.++|+++|+++|+|+++. + +..+ ..+ .++ ...+++.|++|.+ |++| +|++++ ++
T Consensus 157 -~~~I~~l~~~~~~~vivD~~~~---~-g~~~-~~~----~~~------~~d~~~~s~~K~~-gp~G--~G~l~~---~~ 214 (381)
T PRK02948 157 -IAEIGALLKKYNVLFHSDCVQT---F-GKLP-IDV----FEM------GIDSLSVSAHKIY-GPKG--VGAVYI---NP 214 (381)
T ss_pred -HHHHHHHHHHcCCEEEEEChhh---c-cccc-cCc----ccC------CCCEEEecHHhcC-CCCc--EEEEEE---cC
Confidence 7889999999999999997654 2 2111 111 111 1236789999987 7888 788876 54
Q ss_pred HH-HHHHHHh----hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Q 009517 371 EV-REQIYKV----AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA 444 (533)
Q Consensus 371 ~~-~~~l~~~----~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 444 (533)
++ +..+... .. ..++++..++.++.++++. ..+++++.++++++.++++++.|+++ |+++...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~ 283 (381)
T PRK02948 215 QVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAEN----------ILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVE 283 (381)
T ss_pred CCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEe
Confidence 43 1111100 01 2356788888888877741 22456777888999999999999998 6654432
Q ss_pred CceeEEecc---cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC----------------CCCCceEEEE
Q 009517 445 EGAMYLFPR---IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ----------------VPGTWHFRCT 505 (533)
Q Consensus 445 ~gg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~----------------~~g~~~iRis 505 (533)
....+.+.. +..+ +.+ ...+. ..|.++||.+.+|..+.. +...++||||
T Consensus 284 ~~~~~~~~~i~~~~~~----------~~~-~~~~~-~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis 351 (381)
T PRK02948 284 GHSTSCLPHIIGVTIK----------GIE-GQYTM-LECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFS 351 (381)
T ss_pred CCCccCcCCEEEEEeC----------CCC-HHHHH-HhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEE
Confidence 211111111 1111 111 23333 345778999999875311 0123589999
Q ss_pred ec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 506 IL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 506 ~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+. +++++++++++.|+++++++.+
T Consensus 352 ~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 352 FGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 96 7899999999999998876543
No 170
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=3.6e-24 Score=221.74 Aligned_cols=327 Identities=16% Similarity=0.120 Sum_probs=220.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcc----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~g 215 (533)
++++++++.+++.+... ....+....| ..+|.+.+|+++ | .+..+++++|++|+..++..+.. .+|
T Consensus 61 ~p~v~~a~~~~~~~~~~-~~~~s~~~~~~~~~~~~le~~la~~~----g----~~~~~~~~SG~~An~~ai~~l~~~~~g 131 (406)
T PRK13393 61 HPAVLAAMHEALDTCGA-GAGGTRNISGTNHYHVLLEAELADLH----G----KEAALLFTSGYVSNWAALSTLGSRLPG 131 (406)
T ss_pred CHHHHHHHHHHHHHcCC-CCcccccccCChHHHHHHHHHHHHHh----C----CCcEEEeCCcHHHHHHHHHHhhcCCCC
Confidence 68999999999886432 1111111122 456666666665 3 24666666666899999987651 267
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
+.|+.....|......+...|.++..++. .|++.+++.++... ..++++|++++++|++|.+.+ +++|
T Consensus 132 ~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~---l~~i 199 (406)
T PRK13393 132 CVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAP---IAEI 199 (406)
T ss_pred CEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhC---HHHH
Confidence 76666666776677777778887766653 37888888776421 125788999999999999999 9999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
.++|+++|+++|+||+|....++... ..+.. ..++ .++ ..|+++||||++ |++| ||+++ ++++++.
T Consensus 200 ~~l~~~~~~~livDea~~~g~~g~~G--~g~~~-~~~~---~~~-~~i~~~tlsKa~-g~~G---G~~~~---~~~~~~~ 265 (406)
T PRK13393 200 CDVAEKHGAMTYLDEVHAVGLYGPRG--GGIAE-REGL---ADR-LTIIEGTLAKAF-GVMG---GYITG---SAALCDF 265 (406)
T ss_pred HHHHHHcCCEEEEECCccccccCCCC--Cchhh-hcCC---CCC-CeEEEEeCchhh-cccC---ceeeC---CHHHHHH
Confidence 99999999999999999843443211 11111 1111 122 247789999999 6666 89887 8899888
Q ss_pred HHHhhhc---cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEec
Q 009517 376 IYKVASV---NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452 (533)
Q Consensus 376 l~~~~~~---~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~ 452 (533)
+...... +.+.++..+.++.++|+. .+.....+.++.++++++++.|+++ |+.++++.+.++.+
T Consensus 266 l~~~~~~~~~t~~~~p~~~aa~~aaL~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~v- 332 (406)
T PRK13393 266 IRSFASGFIFTTSLPPAVAAGALASVRH-----------LKASSAERERHQDRVARLRARLDKA-GIPHLPNPSHIVPV- 332 (406)
T ss_pred HHHhCcCceecCccCHHHHHHHHHHHHH-----------HhhCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCeEEE-
Confidence 8765432 345567777777777642 1111122355678888999999887 88777777776544
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+..+. ....+...+++++||.+.++.....+.+..+|||++. ++++++++++++|+++++++
T Consensus 333 ~~~~~~------------~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 333 MVGDPV------------LCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred EeCCHH------------HHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 222110 1234455555557999998755443445568999996 89999999999999987754
No 171
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=7.8e-25 Score=225.15 Aligned_cols=329 Identities=16% Similarity=0.129 Sum_probs=226.7
Q ss_pred CHHHHHHHHHHHhcCCCC--CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc----CC
Q 009517 141 SADSIERAWQILDQIPGR--ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----SE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~~ 214 (533)
++.|++++.+.+.+...+ ..+.|+ ..+...+++++++++.. .|. .++++|++|+|+++++..+++.+.. ++
T Consensus 12 ~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~~ 88 (382)
T TIGR03403 12 DPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEILKG 88 (382)
T ss_pred CHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcccC
Confidence 688999988877653221 122344 34577899999888853 232 2578999999999999999987621 34
Q ss_pred -CCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 215 -NDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 215 -gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
+++|+++...|+.+.. .++..|++++.+++++ ++.+|++.+++++++ +++++++++|+||||.+++
T Consensus 89 ~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~-- 158 (382)
T TIGR03403 89 GKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITE------KTALVSVMWANNETGMIFP-- 158 (382)
T ss_pred CCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhccc------CCeEEEEEcccCCCccccC--
Confidence 4789999877665544 4556799999999874 357899999999976 7899999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+++|.++|+++|+++|+|+++.. +..+ .++ .++ ..| +++.|++|.+ |++|+ |++.+ .+
T Consensus 159 -~~~I~~la~~~g~~~ivD~a~~~----g~~~-~~~----~~~---~~D---~~~~s~~K~~-gp~G~--g~l~v---r~ 216 (382)
T TIGR03403 159 -IKEIGEICKERGVLFHTDAVQAI----GKIP-VDV----QKA---GVD---FLSFSAHKFH-GPKGV--GGLYI---RK 216 (382)
T ss_pred -HHHHHHHHHHcCCEEEEechhhc----CCCc-cCc----ccc---CCC---EEEEcchhhC-CCCce--EEEEE---CC
Confidence 77899999999999999999763 2211 111 111 233 7788999976 77785 66655 22
Q ss_pred HH--HHHHH---Hhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Q 009517 371 EV--REQIY---KVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA 444 (533)
Q Consensus 371 ~~--~~~l~---~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 444 (533)
.. ...+. ... ...++++..++.++..+++ ...+.++...+++++.++++.+.|.+++|+.++.+
T Consensus 217 ~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 286 (382)
T TIGR03403 217 GVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMR----------LANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGD 286 (382)
T ss_pred CCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECC
Confidence 21 01110 001 1235577777777776663 12233566678889999999999999889988865
Q ss_pred C----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-------------C---CCceEEE
Q 009517 445 E----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-------------P---GTWHFRC 504 (533)
Q Consensus 445 ~----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-------------~---g~~~iRi 504 (533)
. .++. .+.++. . +..... ..|.++||.++.|+.+... . ..+.||+
T Consensus 287 ~~~~~~~~~-~~~~~~------------~-~~~~~~-~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~ 351 (382)
T TIGR03403 287 REHRVPNTI-LISIKG------------V-EGEAML-WDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRL 351 (382)
T ss_pred CCCCcCCEE-EEEeCC------------C-CHHHHH-HhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEE
Confidence 4 2332 222331 1 123333 3467889999988655210 0 1247999
Q ss_pred Eec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 505 TIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 505 s~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
|+. .++++|++++++|++++++++.
T Consensus 352 s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 352 SLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 996 8999999999999999887654
No 172
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=2e-24 Score=220.64 Aligned_cols=295 Identities=14% Similarity=0.069 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch--HHHHHHhCCeEEEEecCCC
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEA 247 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~~~~ 247 (533)
.++|+.+++++ |.+-+.+.|++|+|+++++..++..+. .+||.+++..+.+++. ...++..|.+++.+++++
T Consensus 38 ~~~r~~la~l~----~~~~~~~~i~~t~~~t~al~~~~~~l~-~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~- 111 (363)
T TIGR02326 38 EQIRQQLLALA----TAEEGYTSVLLQGSGTFAVEAVIGSAV-PKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE- 111 (363)
T ss_pred HHHHHHHHHHh----CCCCCceEEEEcCCCHHHHHHHHHhcC-CCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence 44556666655 432223479999999999999999998 6888877766665554 466788899999999864
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHH
Q 009517 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (533)
Q Consensus 248 ~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~ 327 (533)
+..+|++.+++++++. ++++++.+++++||||+.++ +++|.++|+++|+++|+|++++ + |..+ .++.
T Consensus 112 -~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~-g~~~-~~~~ 178 (363)
T TIGR02326 112 -VEPPDVVEVEAILAAD----PAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---F-GGIP-IDIA 178 (363)
T ss_pred -CCCCCHHHHHHHHhhC----CCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc---c-cCcc-cchh
Confidence 4478999999998762 24677888899999999998 8899999999999999998875 3 2222 2221
Q ss_pred HHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh------------------h-ccccCCh
Q 009517 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA------------------S-VNLCSNI 388 (533)
Q Consensus 328 ~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~------------------~-~~~~~~~ 388 (533)
++ +.| +++.|++|++.|++| +||+++ +++.++.+.... . ..++++.
T Consensus 179 ----~~---~~D---~~~~s~~K~l~~p~G--~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~ 243 (363)
T TIGR02326 179 ----EL---HID---YLISSANKCIQGVPG--FGFVIA---RQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPT 243 (363)
T ss_pred ----hc---Ccc---EEEecCccccccCCc--ceEEEE---CHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcH
Confidence 22 233 778999998866666 699988 887776543210 0 1235667
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCceEecC---CceeEEecccCCCHHHHHH
Q 009517 389 SGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFNSLEGITCNKA---EGAMYLFPRIQLPEKAIKA 463 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~gg~~~~~~~~~~~~~~~~ 463 (533)
..+.++..+++. +.+ .++++.++++++++++++.|+++ |+.++.+ ..+...|+.++....
T Consensus 244 ~~~~al~~al~~----------l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---- 308 (363)
T TIGR02326 244 HVVHAFAQALLE----------LEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD---- 308 (363)
T ss_pred HHHHHHHHHHHH----------HHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC----
Confidence 777776666531 112 14567788999999999999988 8776543 344445543331100
Q ss_pred HHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c-CCcCcHHHHHHHHHHHH
Q 009517 464 AEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L-PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 464 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~-~~~e~i~~~~~~l~~~l 524 (533)
. +...+ .+.|+++||.+.||..+. .++|||++ + .+.+++++++++|++++
T Consensus 309 -----~-~~~~v-~~~L~~~gi~v~~g~~~~----~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 309 -----Y-RFADF-YQRLKEQGFVIYPGKVSQ----VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred -----C-CHHHH-HHHHHHCCEEEECCcCCC----CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 12333 355677899999987663 23899996 5 78999999999998875
No 173
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=5.5e-25 Score=229.11 Aligned_cols=373 Identities=12% Similarity=0.079 Sum_probs=237.3
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
.++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+
T Consensus 40 ~~i~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~ 87 (443)
T PRK06058 40 VYVARAGGGIVEDVDGNR------LIDLGSGIAVT----------------------SVGNS----APRVVEAVREQVAR 87 (443)
T ss_pred ceEEeeeeeEEEeCCCCE------EEEcCcchhhh----------------------ccCCC----CHHHHHHHHHHHHh
Confidence 366778888888888888 77776654221 11111 68999999999986
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC-CCeEEEcCCcCcchHHHHH
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE-NDGILCPIPQYPLYSASIA 233 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~-gd~Vlv~~p~~~~~~~~~~ 233 (533)
.. .+.......+.+..+|+.+.+..+. ...+.++++++|++|++.+++..+... .++|+...++|+++.....
T Consensus 88 ~~-----~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al 161 (443)
T PRK06058 88 FT-----HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTM 161 (443)
T ss_pred cc-----CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHH
Confidence 31 1222222345666677777654321 112589999999999999999765223 3789999999999875544
Q ss_pred HhCC--------------eEEEEecCCC----CCCCCCH-HHHHHHHHHHHh--cCCCeeEEEEeCCCCCCccC-CCHHH
Q 009517 234 LHGG--------------TLVPYYLDEA----TGWGLET-SEVKKQLEAAKA--KGITVRALVVINPGNPTGQV-LAEEN 291 (533)
Q Consensus 234 ~~g~--------------~~~~v~~~~~----~~~~ld~-~~l~~~i~~~~~--~g~~~~~iil~~p~NPtG~~-~s~~~ 291 (533)
.... .+..++.... .++..+. +.+++.++...+ .+.++.+||++..+.-.|++ ++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~y 241 (443)
T PRK06058 162 ALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGF 241 (443)
T ss_pred hhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHH
Confidence 3211 1111221100 0001111 112222211110 12367777765444445654 56888
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
+++|.++|++||+++|+||++++|.+.|. ... .+..++.|| +.+++|.+ | .|+|+|++++ +++
T Consensus 242 l~~lr~lc~~~gillI~DEV~tGfgRtG~--~fa-----~~~~gv~PD-----iv~~gK~l-~-~G~Pi~av~~---~~~ 304 (443)
T PRK06058 242 LPALLEWCRENGVVFIADEVQTGFARTGA--WFA-----CEHEGIVPD-----LITTAKGI-A-GGLPLSAVTG---RAE 304 (443)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcChh--hhH-----HHhcCCCCC-----EEEEcccc-c-CCCccEEEEE---cHH
Confidence 99999999999999999999999876653 111 122223677 45678999 5 6999999998 899
Q ss_pred HHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCc
Q 009517 372 VREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEG 446 (533)
Q Consensus 372 ~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~g 446 (533)
+++.+..... .|++.++++++++.+.|+. .+ .+.+.++.+++.+++.+.|+++ +.+.-+++.|
T Consensus 305 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~-----------~~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G 372 (443)
T PRK06058 305 IMDAPHPGGLGGTYGGNPVACAAALAAIET-----------IE-EDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRG 372 (443)
T ss_pred HHhhccCCCCCCCCCCCHHHHHHHHHHHHH-----------HH-HcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccc
Confidence 9888765433 7889999999999998841 11 1346667777778888888764 3345578899
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l 524 (533)
.|+.+.-...+.. .....-...++ ..+.++||++.|+..|+. +||+.+ .+++++|++++++|++++
T Consensus 373 ~~~~i~~~~~~~~------~~~~~~~~~l~-~~~~~~Gv~~~~~~~~~~-----~lr~~Ppl~~t~~~i~~~~~~l~~~l 440 (443)
T PRK06058 373 AMIAIELVKPGTT------EPDAELTKALA-AAAHAAGVIVLTCGTYGN-----VIRLLPPLVIGDELLREGLDVLEAAL 440 (443)
T ss_pred eEEEEEEecCCCC------CCcHHHHHHHH-HHHHHCCeEEeccCCCCC-----EEEEECCCccCHHHHHHHHHHHHHHH
Confidence 8876532221100 00000012223 334568999998755542 899986 489999999999999998
Q ss_pred HH
Q 009517 525 KN 526 (533)
Q Consensus 525 ~~ 526 (533)
++
T Consensus 441 ~~ 442 (443)
T PRK06058 441 AD 442 (443)
T ss_pred Hh
Confidence 65
No 174
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=4.3e-24 Score=218.64 Aligned_cols=299 Identities=14% Similarity=0.073 Sum_probs=208.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch--HHHHHHhCCeEEEEecCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDE 246 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~~~ 246 (533)
..++|+.++++++ .+-+.+.|+++.|+++++..++..+. .+||+|+++.++|.+. ...++..|++++.++.++
T Consensus 39 ~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~ 113 (368)
T PRK13479 39 TASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE 113 (368)
T ss_pred HHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC
Confidence 5667777777664 22223568899999999999999998 7899999988888765 477788999999999874
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccH
Q 009517 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (533)
Q Consensus 247 ~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~ 326 (533)
++.+|++++++++++. +++++|++++|+||||...+ +++|.++|+++|+++|+|+++ . ++. .+ .++
T Consensus 114 --~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~-~--~g~-~~-~~~ 179 (368)
T PRK13479 114 --DEPPDAAEVEAALAAD----PRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMS-S--FGA-IP-IDI 179 (368)
T ss_pred --CCCCCHHHHHHHHHhC----CCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEccc-c--cCC-cc-ccc
Confidence 3478999999998752 25678999999999999998 789999999999999999655 3 322 12 121
Q ss_pred HHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh------------------ccccCCh
Q 009517 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS------------------VNLCSNI 388 (533)
Q Consensus 327 ~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~------------------~~~~~~~ 388 (533)
. .+ +.| +++.|++|++.|++| +||+++ ++++++.+..... ..++++.
T Consensus 180 ~----~~---~~d---~~v~s~~K~l~g~~G--~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 244 (368)
T PRK13479 180 A----EL---GID---ALISSANKCIEGVPG--FGFVIA---RRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPT 244 (368)
T ss_pred c----cc---Cce---EEEecCccccccCCC--ceEEEE---CHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcH
Confidence 1 11 223 667899998767777 599998 8888877654321 1135555
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCC-----ceeEEecccCCCHHHHHH
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAE-----GAMYLFPRIQLPEKAIKA 463 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-----gg~~~~~~~~~~~~~~~~ 463 (533)
..+.++.++++. +.. ...+++..++++++++.+++.|+++ |+.+..+. +...++ ++.+..
T Consensus 245 ~~~~~l~~al~~-------l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--~~~~~~---- 309 (368)
T PRK13479 245 HVVAAFYQALLE-------LEE-EGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFH--APADPA---- 309 (368)
T ss_pred HHHHHHHHHHHH-------HHH-hhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEE--CCCCCC----
Confidence 555555555531 100 0124566678899999999999998 87765332 122233 221100
Q ss_pred HHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c-CCcCcHHHHHHHHHHHHHHH
Q 009517 464 AEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L-PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 464 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~-~~~e~i~~~~~~l~~~l~~~ 527 (533)
. +...+. ..|.++||.+.+|..+. .+++|++. + .+++++++++++|+++++++
T Consensus 310 -----~-~~~~l~-~~L~~~gi~v~~g~~~~----~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 310 -----Y-DFKEFY-ERLKEQGFVIYPGKLTQ----VDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred -----c-CHHHHH-HHHHHCCEEEecCCCCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1 123333 45667899999986542 23899986 5 78999999999999988764
No 175
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=3.9e-25 Score=226.59 Aligned_cols=314 Identities=13% Similarity=0.133 Sum_probs=216.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 219 (533)
++++++++.+++.... .+... -..++++++++.+... ....+++++++++|+..+++.++. ..+++|+
T Consensus 46 ~p~v~~a~~~~~~~~~-----~~~~~-~~~~~~~~la~~l~~~-----~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv 114 (375)
T PRK04260 46 HPQVQQALQKQAGLIW-----HSPNL-YLNSLQEEVAQKLIGD-----KDYLAFFCNSGAEANEAAIKIARKATGKQEII 114 (375)
T ss_pred CHHHHHHHHHHHHhcC-----cccCc-cCCHHHHHHHHHHhcC-----cCCEEEEcCccHHHHHHHHHHHHHhcCCCeEE
Confidence 4679999999887621 22222 2567888999887521 122468899999999999998742 2357899
Q ss_pred EcCCcCcchHH-HHHHhCCeEE---------EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC-C
Q 009517 220 CPIPQYPLYSA-SIALHGGTLV---------PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-A 288 (533)
Q Consensus 220 v~~p~~~~~~~-~~~~~g~~~~---------~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~-s 288 (533)
+.+..|++... .+...|.... .++... ..|++.+++.+.+ ++++|++++++|++|++. +
T Consensus 115 ~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~ 184 (375)
T PRK04260 115 TFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FNDLNSVKALVNK------NTAAVMLELVQGESGVLPAD 184 (375)
T ss_pred EECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCCHHHHHHhcCC------CeEEEEECCeECCCCCcCCC
Confidence 99999997442 3322222111 111100 1378999988854 688899999999999864 5
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
.+.+++|.++|+++|+++|+||+|.++.+.|. ..+... ..+ .|| +.||||++ + +|+|+||+++
T Consensus 185 ~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~--~~~~~~--~~~---~pd-----i~t~sK~l-~-~G~~ig~~~~--- 247 (375)
T PRK04260 185 KDFVKALADYCQETGILLIVDEVQTGMGRTGK--LYAFEH--YGI---EPD-----IFTLAKGL-A-NGVPVGAMLA--- 247 (375)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCcccc--hhhhHh--hCC---CCC-----EEEecccc-c-CCcceEEEEE---
Confidence 67899999999999999999999998765442 111111 122 466 45899999 5 6999999998
Q ss_pred CHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCce
Q 009517 369 SAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGA 447 (533)
Q Consensus 369 ~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg 447 (533)
++++++.+..... .+++++++.++++.++|+... ..+.++++++..+..++.+.+.+.+.+.+..++. .|
T Consensus 248 ~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g 318 (375)
T PRK04260 248 KSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIML--------TAGFLEQALENGNYLQEQLQKALQDKETVTTVRG-LG 318 (375)
T ss_pred cHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHH--------hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cc
Confidence 8998887764333 668889999999999885321 1133455666666667777777766643444444 67
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
+++|+.+.. ....+. +.+.++||.+.|+ +.+.+||++. +++++|++++++|+++
T Consensus 319 ~~~~~~~~~--------------~~~~~~-~~l~~~Gi~v~~~-------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 319 YMIGIETTA--------------DLSQLV-EAARDKGLIVLTA-------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred eEEEEEecC--------------cHHHHH-HHHHhCCCEEecC-------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 788866531 123333 4556789999874 2238999993 8899999999999875
No 176
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.94 E-value=1.8e-24 Score=223.76 Aligned_cols=368 Identities=13% Similarity=0.102 Sum_probs=231.0
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++.+++++.+++.+.
T Consensus 25 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~ql~~~ 72 (421)
T PRK09792 25 FAQSAENATLKDVEGNE------YIDFAAGIAVL----------------------NTGHR----HPDLVAAVEQQLQQF 72 (421)
T ss_pred eEEeccccEEEeCCCCE------EEEccCchhhh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 45677777777778887 78876554321 11111 689999999998863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. ..+.. ...+....+|+.+.+..+. ...++++++++|++|++.+++..+...| .+|+....+|++.......
T Consensus 73 ~~---~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s 146 (421)
T PRK09792 73 TH---TAYQI--VPYESYVTLAEKINALAPV-SGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMA 146 (421)
T ss_pred cC---cccCc--cCCHHHHHHHHHHHHhCCC-CCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHh
Confidence 21 11111 1223334455555443210 1236899999999999999998863344 6799999999997644433
Q ss_pred h-CC-------------eEEEEecCCCCCCCC----CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC-CHHHHHHH
Q 009517 235 H-GG-------------TLVPYYLDEATGWGL----ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAI 295 (533)
Q Consensus 235 ~-g~-------------~~~~v~~~~~~~~~l----d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~-s~~~l~~i 295 (533)
. |. .+..+|+.... -++ +++.+++.++... ...++++|+++..++|+|+.+ +++.+++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l 224 (421)
T PRK09792 147 LTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAI 224 (421)
T ss_pred hcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHH
Confidence 2 21 01222222111 012 2466777765310 112688888887799999865 89999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
.++|++||+++|+||+|++|.+.|. ...+..+ ++.+| +.+|||++ + +|+|+||+++ ++++++.
T Consensus 225 ~~lc~~~g~llI~DEv~tg~gr~G~--~~a~~~~-----~~~pD-----i~t~gK~l-~-~G~pigav~~---~~~i~~~ 287 (421)
T PRK09792 225 RRLCDEHGIVMIADEVQSGFARTGK--LFAMDHY-----ADKPD-----LMTMAKSL-A-GGMPLSGVVG---NANIMDA 287 (421)
T ss_pred HHHHHHcCCEEEEeccccCCCCCCc--hhHHHhc-----CCCCc-----EEEeehhh-c-CCCceEEEEE---cHHHHhc
Confidence 9999999999999999999877653 2222221 11466 67999999 5 6999999998 9999887
Q ss_pred HHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecCCc-eeE
Q 009517 376 IYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKAEG-AMY 449 (533)
Q Consensus 376 l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~g-g~~ 449 (533)
+..... .++++++++++++.+.++- .++ .+..++.++..+++.+.|++ .|.+ ..+.| |++
T Consensus 288 ~~~~~~~~T~~gnpl~~aaa~a~l~~-----------l~~-~~~~~~~~~~g~~l~~~l~~l~~~~p~v--~~vrG~Gl~ 353 (421)
T PRK09792 288 PAPGGLGGTYAGNPLAVAAAHAVLNI-----------IDK-ESLCERANQLGQRLKNTLIDAKESVPAI--AAVRGLGSM 353 (421)
T ss_pred cCCCCcCCCCCCCHHHHHHHHHHHHH-----------HHh-hhHHHHHHHHHHHHHHHHHHHHHhCCCc--ceecccceE
Confidence 754333 6788999999988777641 111 12233333334444444433 3433 34555 778
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
+|+.+..+... .........++ ..+.++||++.+... ..+.|||.+. +++++|++++++|.++++
T Consensus 354 ~~ie~~~~~~~-----~~~~~~~~~l~-~~~~~~Gv~i~~~g~-----~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 354 IAAEFNDPQTG-----EPSAAIAQKIQ-QRALAQGLLLLTCGA-----YGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EEEEecCCccC-----CcchHHHHHHH-HHHHHCCcEEeecCC-----CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 88766422100 00000122333 444568999964211 1248999985 899999999999998875
No 177
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=3.8e-24 Score=220.75 Aligned_cols=309 Identities=13% Similarity=0.064 Sum_probs=221.0
Q ss_pred cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch--HHHHHHhCCeEEEEec
Q 009517 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYL 244 (533)
Q Consensus 167 ~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~ 244 (533)
.+..++++++++.+.+.+|.+ ..+.+++++++++++..++..++ ++||+|+++++.|.+. ...++..|++++.++.
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~-~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTL-SPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcC-CCCCEEEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 457889999999998888853 22467888899999999999887 8999999999988765 4667788999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+.+ ..+|++++++++++.. .+++++|++++++||||.+++.+++.++++ |+++|+++|+|++++- |..+ .
T Consensus 116 ~~~--~~~~~~~l~~~l~~~~--~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s~----g~~~-i 185 (401)
T PLN02409 116 PWG--QGADLDILKSKLRQDT--NHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSSI----GALD-F 185 (401)
T ss_pred CCC--CCCCHHHHHHHHhhCc--CCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEccccc----CCcc-c
Confidence 753 3579999999998510 016899999999999999999555544444 9999999999999873 2211 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh----------------c---ccc
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS----------------V---NLC 385 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~----------------~---~~~ 385 (533)
++ .++ .-| +++.|.+|++.+. .++||+++ ++++++.+.+... . .++
T Consensus 186 d~----~~~---~~D---~~~~s~~K~l~~P--~G~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~T 250 (401)
T PLN02409 186 RM----DEW---GVD---VALTGSQKALSLP--TGLGIVCA---SPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYT 250 (401)
T ss_pred cc----ccc---Ccc---EEEEcCccccCcC--CCcceeEE---CHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCC
Confidence 11 111 122 6677779998543 36999988 8888887754210 0 234
Q ss_pred CChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCC-c---eeEEecccCCCHHHH
Q 009517 386 SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAE-G---AMYLFPRIQLPEKAI 461 (533)
Q Consensus 386 ~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-g---g~~~~~~~~~~~~~~ 461 (533)
++...+.++..+++. + ....++.++++++++++++++.|+++ |++++.+. . +..+++ .+|.+
T Consensus 251 p~~~~~~al~~al~~-------~--~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~--~~p~~-- 316 (401)
T PLN02409 251 PSIQLLYGLRAALDL-------I--FEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAV--VVPEG-- 316 (401)
T ss_pred ccHHHHHHHHHHHHH-------H--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEE--eCCCC--
Confidence 566666666666631 0 01236778888999999999999988 88876542 1 122333 33321
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+ +...+...+++++||.+.+|..- .....|||+.. .+.+++..++++|++++.++
T Consensus 317 -------~-~~~~l~~~l~~~~~i~i~~G~~~---~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 317 -------I-DSAEIVKNAWKKYNLSLGLGLNK---VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred -------C-CHHHHHHHHHHhCCEEEEcCCCc---ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1 23445567778899999988652 12238999995 78889999999999988764
No 178
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=9.2e-25 Score=224.46 Aligned_cols=359 Identities=13% Similarity=0.101 Sum_probs=236.2
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
.++.++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+
T Consensus 24 ~~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~ 71 (408)
T PRK04612 24 VVLERGQGSRVWDDQGRE------YLDLAAGIAVC----------------------GLGHN----DPDLVAALTEQAGK 71 (408)
T ss_pred ceEEEeeeCEEEECCCCE------EEEcCccHhhc----------------------cCCCC----CHHHHHHHHHHHHh
Confidence 356677888777788888 88886664221 11222 68999999999986
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------CC-CeEEEcCCcCc
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-------EN-DGILCPIPQYP 226 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-------~g-d~Vlv~~p~~~ 226 (533)
... +.... ..+....+++.+.+..+ ..+.++++++|++|++.+++..+.. ++ .+|+....+|+
T Consensus 72 ~~~-----~~~~~-~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yH 142 (408)
T PRK04612 72 LWH-----TSNVF-YSAPPLKLAEELVTASR---FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFH 142 (408)
T ss_pred ccc-----ccccc-CCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcC
Confidence 321 12111 23334456666654322 1378999999999999999987621 12 46999999999
Q ss_pred chHHHHHHh-CCeEEE---EecCCC---CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC--HHHHHHHHH
Q 009517 227 LYSASIALH-GGTLVP---YYLDEA---TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA--EENQRAIVD 297 (533)
Q Consensus 227 ~~~~~~~~~-g~~~~~---v~~~~~---~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s--~~~l~~i~~ 297 (533)
+........ |..... -+.... -. -.|++.+++.+.. +..+.++..|.+++|-+++ ++.+++|.+
T Consensus 143 G~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~ 215 (408)
T PRK04612 143 GRTLAAVTATAQPKYQEGYEPLPGGFRYVD-FNDVEALEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRA 215 (408)
T ss_pred CccHHHHHhcCCcccccCCCCCCCCceEcC-CCCHHHHHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 976544433 211111 011100 01 1278888888853 3445566677666765544 678999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||+++|+||+|++|.+.|. ... ....+. .+| +.+|||.+ | +|+|+||+++ ++++++.+.
T Consensus 216 l~~~~g~llI~DEv~tg~gr~G~--~~a--~~~~~~---~pd-----i~t~~K~l-~-~G~piga~~~---~~~~~~~~~ 278 (408)
T PRK04612 216 LCDQHDALLVLDEIQCGMGRTGT--LFA--HWQEQV---TPD-----IVTLAKAL-G-GGFPIGAMLA---GPKVAETMQ 278 (408)
T ss_pred HHHHcCCEEEEeccccCCCcCCc--hhh--hhhcCC---CCC-----EEEEcchh-c-CCCceEEEEE---CHHHHhhhc
Confidence 99999999999999999777552 111 111111 344 78999999 5 6999999998 888887776
Q ss_pred Hhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCceeEEec
Q 009517 378 KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEGAMYLFP 452 (533)
Q Consensus 378 ~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~gg~~~~~ 452 (533)
.... .++++++++++++.++|+ ..++ +.+.++.+++.+++.+.|+++ +-+..+++.|.|+.+.
T Consensus 279 ~~~~~~t~~~~p~~~aaa~a~L~-----------~~~~-~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~ 346 (408)
T PRK04612 279 FGAHGTTFGGNPLAAAVARVALR-----------KLAS-PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAV 346 (408)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEE
Confidence 5433 678899999999998884 2222 356666777777777777664 3355677888665542
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+..+.. ..... +.+.+.++||++.|. +.+.+|+.+. +++++|++++++|+++++++.+
T Consensus 347 -~~~~~~----------~~a~~-i~~~l~~~Gvlv~~~-------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 347 -LAPAHA----------GQAGA-ILDLAAEHGLLLLQA-------GPDVLRFVPALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred -ecCchh----------hHHHH-HHHHHHHCCeEEeeC-------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 211100 01223 335567799999862 2248999984 8999999999999999987654
No 179
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=3e-24 Score=220.91 Aligned_cols=216 Identities=17% Similarity=0.179 Sum_probs=168.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH-----HHhCCeEEEEe
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-----ALHGGTLVPYY 243 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~-----~~~g~~~~~v~ 243 (533)
..+|++.+|++.+ .+.+++++|+++|+..++.+++ ++||+|+++.|.|..+...+ +..|++++.++
T Consensus 78 ~~~LE~~lA~l~g--------~~~~l~~~sG~~Ai~~al~al~-~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALEG--------TEAAYCTASGMSAISSVLLQLC-SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 7788899998864 4567899999999999999998 89999999999998887655 34677776665
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCc
Q 009517 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (533)
Q Consensus 244 ~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~ 323 (533)
. .|++.+++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+|++|..+.+...
T Consensus 149 ~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~~--- 210 (418)
T PLN02242 149 I-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSPA--- 210 (418)
T ss_pred C-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCHH---
Confidence 3 2799999998651 4899999999999999987 89999999999999999999987554210
Q ss_pred ccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe-eEEEEEecCCHHHHHHHHHhhh---ccccCChHHHHHHHHHcC
Q 009517 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMS 399 (533)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r-iG~v~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~a~~~~L~ 399 (533)
. + . ..|++.||||.+ +++|++ .||+++ ++++++.+..... ...+++...|.++..++.
T Consensus 211 ----~----~---g---~divv~S~SK~l-~g~g~~~gG~iv~---~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~ 272 (418)
T PLN02242 211 ----R----L---G---ADVVVHSISKFI-SGGADIIAGAVCG---PAELVNSMMDLHHGALMLLGPTMNPKVAFELSER 272 (418)
T ss_pred ----H----c---C---CcEEEEeCcccc-CCCCCceEEEEEc---CHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC
Confidence 1 1 1 238899999999 668887 588887 8899888876643 235556667777766654
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN 442 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 442 (533)
.. .+..+.++++++++.+.+.|++. ++++.
T Consensus 273 l~------------tl~~r~~~~~~~a~~la~~L~~~-~~~V~ 302 (418)
T PLN02242 273 LP------------HLSLRMKEHCRRAMEYAKRMKEL-GLKVI 302 (418)
T ss_pred CC------------cHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 21 23445668889999999999988 55554
No 180
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=1.6e-24 Score=222.29 Aligned_cols=316 Identities=16% Similarity=0.155 Sum_probs=216.7
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccC--CCcccHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHhccC-
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYS--HSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLIRS- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~--~~~G~~~lr~aia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~~- 213 (533)
|+.+++++.+.+....... ...+. ...+..++|+.++++++ .+ +++|++|+|+++++..++.++. .
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~-~~ 84 (373)
T cd06453 12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLG-RA 84 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhh-hc
Confidence 7888988888775422100 00111 12335677888888874 34 6789999999999999999987 5
Q ss_pred --CCCeEEEcCCcCcch----HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC
Q 009517 214 --ENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (533)
Q Consensus 214 --~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~ 287 (533)
+||+|++++++|+.. ....+..|++++.++++. ++.+|++++++.+.+ ++++|++++|+||||.+.
T Consensus 85 ~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~ 156 (373)
T cd06453 85 NKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD--DGQLDLEALEKLLTE------RTKLVAVTHVSNVLGTIN 156 (373)
T ss_pred CCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC--CCCcCHHHHHHHhcC------CceEEEEeCcccccCCcC
Confidence 899999999999874 334456799999999873 457999999999976 789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+ +++|+++|+++|+++|+|++|..... + .++ .++ ..| +++.|++|.+ ++ .++||+++
T Consensus 157 ~---~~~i~~~~~~~~~~li~D~a~~~~~~----~-~~~----~~~---~~d---~~~~s~~K~~-~~--~g~g~~~~-- 213 (373)
T cd06453 157 P---VKEIGEIAHEAGVPVLVDGAQSAGHM----P-VDV----QDL---GCD---FLAFSGHKML-GP--TGIGVLYG-- 213 (373)
T ss_pred C---HHHHHHHHHHcCCEEEEEhhhhcCce----e-eec----ccc---CCC---EEEecccccc-CC--CCcEEEEE--
Confidence 8 78999999999999999999864221 1 111 111 233 5667888998 53 56899988
Q ss_pred CCHHHHHHHHHhhhc----------------------cccCChHHHHHHHHHcCCCCCCChhHHHHH-HHHHHHHHHHHH
Q 009517 368 FSAEVREQIYKVASV----------------------NLCSNISGQILASLVMSPPKVGDESYESYC-AERDGILSSLAR 424 (533)
Q Consensus 368 ~~~~~~~~l~~~~~~----------------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~ 424 (533)
++++++.+...... ..+++.....++..+++. .. ...+.++++.++
T Consensus 214 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~----------l~~~g~~~~~~~~~~ 282 (373)
T cd06453 214 -KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDY----------LEKIGMEAIAAHEHE 282 (373)
T ss_pred -chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHH----------HHHcCHHHHHHHHHH
Confidence 88887776543210 012344444444444421 11 124567777788
Q ss_pred HHHHHHHHHhcCCCceEecC---CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-----
Q 009517 425 RAKTLEDAFNSLEGITCNKA---EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV----- 496 (533)
Q Consensus 425 ~~~~l~~~L~~~~g~~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~----- 496 (533)
.++++.+.|+++++++++.+ .++++ ++.++ . . +..++ .+.|+++||.+.+|..+...
T Consensus 283 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~--~----------~-~~~~i-~~~l~~~gi~i~~g~~~~~~~~~~~ 347 (373)
T cd06453 283 LTAYALERLSEIPGVRVYGDAEDRAGVV-SFNLE--G----------I-HPHDV-ATILDQYGIAVRAGHHCAQPLMRRL 347 (373)
T ss_pred HHHHHHHHHhcCCCeEEeCCccccCCeE-EEEEC--C----------c-CHHHH-HHHHHHCCEEeccCccchhHHHHHh
Confidence 88999999999888887643 34443 33332 1 1 12333 34566789999988754211
Q ss_pred CCCceEEEEec--CCcCcHHHHHHHH
Q 009517 497 PGTWHFRCTIL--PQEDKIPAIVTRL 520 (533)
Q Consensus 497 ~g~~~iRis~~--~~~e~i~~~~~~l 520 (533)
...++||+|+. .++++++++++.|
T Consensus 348 ~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 348 GVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 11348999997 6889999888764
No 181
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=3.6e-24 Score=220.09 Aligned_cols=323 Identities=16% Similarity=0.185 Sum_probs=217.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccC--C--CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--CC
Q 009517 141 SADSIERAWQILDQIPGRATGAYS--H--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--SE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~--~--~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~ 214 (533)
|+.+++++.+.+....+.....+. + ..-+.++|+.+++++ | .++++|++|+|+++++..++..+.. .+
T Consensus 12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~i~~t~~~t~a~~~al~~~~~~~~~ 85 (379)
T TIGR03402 12 DPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLL----G--AEPDEIIFTSGGTESDNTAIKSALAAQPE 85 (379)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 788999988877642110000110 0 111345666666665 4 5578999999999999999987631 34
Q ss_pred CCeEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 215 NDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
|++|++....|+.+...+ ...|.+++.++.+. ++.+|++++++.+++ +++++++++++||||.+++
T Consensus 86 ~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~--- 154 (379)
T TIGR03402 86 KRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITD------DTALVSVMWANNETGTIFP--- 154 (379)
T ss_pred CCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCC------CcEEEEEEcccCCeeeccc---
Confidence 688999888887765433 34699999998864 346899999999976 7899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
+++|.++|+++|+++|+|+++.. |..+ .++. ++ ..| +++.|.+|.+ |++| +|++.+ .++
T Consensus 155 ~~~I~~l~~~~g~~vivD~~~~~----g~~~-~~~~----~~---~~D---~~~~s~~K~~-gp~G--~g~l~v---~~~ 213 (379)
T TIGR03402 155 IEEIGEIAKERGALFHTDAVQAV----GKIP-IDLK----EM---NID---MLSLSGHKLH-GPKG--VGALYI---RKG 213 (379)
T ss_pred HHHHHHHHHHcCCEEEEECcccc----cccc-cCcc----cC---CCC---EEEEcHHHcC-CCCc--eEEEEE---CCC
Confidence 67899999999999999999974 3211 1111 11 233 6677888954 7666 666665 333
Q ss_pred HHHHHHHhh--------hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEe
Q 009517 372 VREQIYKVA--------SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGITCN 442 (533)
Q Consensus 372 ~~~~l~~~~--------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~ 442 (533)
.. +.+.. ....+++..+..++.++++ ...++++.+.+++++.++++++.|.+ ++++.+.
T Consensus 214 ~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~----------~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 281 (379)
T TIGR03402 214 TR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAE----------LATEHLEEENTRVRALRDRLEAGLLARIPDARLN 281 (379)
T ss_pred CC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence 21 11110 1223455555555555543 12344566677888889999999985 7888776
Q ss_pred cCC-----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----------------CCce
Q 009517 443 KAE-----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP----------------GTWH 501 (533)
Q Consensus 443 ~~~-----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~----------------g~~~ 501 (533)
.+. +.+.+|+ +.+ +...+ ...|.++||.+.+|..|.... ..+.
T Consensus 282 ~~~~~~~~~~~~~~~--~~~-------------~~~~~-~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~ 345 (379)
T TIGR03402 282 GDPTKRLPNTVNISF--EYI-------------EGEAI-LLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGS 345 (379)
T ss_pred CCCccCCCCEEEEEe--cCC-------------CHHHH-HHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCce
Confidence 542 2344442 211 12333 356678999999998774321 1248
Q ss_pred EEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 502 FRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 502 iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
||+|+. ++++||+++++.|+++++++.+
T Consensus 346 vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 346 IRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999996 8999999999999999887653
No 182
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.94 E-value=2.6e-24 Score=216.66 Aligned_cols=375 Identities=14% Similarity=0.072 Sum_probs=252.7
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
..+.++.+...++.||+. +|||..|.-.. ++++| +|.|++++.+++..
T Consensus 40 ~~~~ra~G~~l~DvdG~~------ylDf~sgi~v~----------------------~~GH~----hP~Vv~Av~~q~~~ 87 (447)
T COG0160 40 LVIVRAEGAYLYDVDGNE------YLDFLSGIAVL----------------------NLGHN----HPRVVEAVKRQLAK 87 (447)
T ss_pred ceEEecccCEEEeCCCCE------EEEcccCcchh----------------------ccCCC----CHHHHHHHHHHHHH
Confidence 367788888888888888 66666543221 22222 68999999999987
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHH
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIA 233 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~ 233 (533)
... ....|... +-..++|+.+.+.... ...+.++++++|++|++.+++......| ..|+...-.|++......
T Consensus 88 ~~h-~~~~~~~~----e~~v~~ae~L~~~~p~-~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~gal 161 (447)
T COG0160 88 LNH-THTRDLYY----EPYVELAEKLTALAPG-SGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGAL 161 (447)
T ss_pred hhc-ccCCcccc----hhHHHHHHHHHHhCCc-ccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhH
Confidence 532 12223332 3444455555443221 1457899999999999999999864344 789999999998665443
Q ss_pred Hh-C-------------CeEEEEecCCC--CCCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCC
Q 009517 234 LH-G-------------GTLVPYYLDEA--TGWGL--------ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLA 288 (533)
Q Consensus 234 ~~-g-------------~~~~~v~~~~~--~~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s 288 (533)
.+ | ..++.+|+... +.|+. ..+.++..+........++.+||+...+...|. ++|
T Consensus 162 slT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p 241 (447)
T COG0160 162 SLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPP 241 (447)
T ss_pred HhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCC
Confidence 32 1 12444444321 12222 234455555554444457889999988988887 667
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
++.++++.++|++||+++|+||+++++..+|. ++++.. .++.|| +.++||.++ .|+++|.++.
T Consensus 242 ~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~--~fa~E~-----~gv~PD-----ivt~aK~ig--~G~Pl~avv~--- 304 (447)
T COG0160 242 KGFLKALRKLCREHGILLIADEVQTGFGRTGK--MFAFEH-----FGVEPD-----IVTLAKSLG--GGLPLSAVVG--- 304 (447)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCcccc--chhhhh-----cCCCCC-----EEEeccccc--CCCceeEEec---
Confidence 77799999999999999999999999888874 454433 333688 678999994 4999999998
Q ss_pred CHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecC
Q 009517 369 SAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKA 444 (533)
Q Consensus 369 ~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~ 444 (533)
.+++++........|+++|+++++++.+.|+. + + .+.+.++..+..++|++.|.++ |-+.-++.
T Consensus 305 r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~v----------i-e-~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG 372 (447)
T COG0160 305 RAEIMDWPPGGHGGTFGGNPVACAAALAVLDV----------I-E-EENLLERAAELGEYLRDRLEELQEKHPLIGDVRG 372 (447)
T ss_pred cHHhcccCCcccCCCCCcCHHHHHHHHHHHHH----------H-H-HccHHHHHHHHHHHHHHHHHHHHhhcCceecccc
Confidence 89998833333447799999999999999841 1 1 2367777788888888888765 54666777
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
.|.|.. +.+..+.+. +.........+...+.++|+.+..+..+++ .|||.+- ++++++++++++|++
T Consensus 373 ~Glm~g-iE~v~d~~t-----~~p~~~~~~~i~~~~~~~Glil~~~G~~~n-----viRi~PPL~is~e~~d~~l~il~~ 441 (447)
T COG0160 373 LGLMIG-VELVKDRDT-----KEPDAELAAKIVARAFERGLLLLTCGPHGN-----VLRILPPLTISDEELDEGLDILEE 441 (447)
T ss_pred cceEEE-EEEecCCCC-----CCCCHHHHHHHHHHHHHcCCEEeccCCCCc-----EEEEeCCcccCHHHHHHHHHHHHH
Confidence 776543 333321100 000001122233445678999987554443 8999994 899999999999999
Q ss_pred HHHHH
Q 009517 523 FHKNF 527 (533)
Q Consensus 523 ~l~~~ 527 (533)
++++.
T Consensus 442 al~~~ 446 (447)
T COG0160 442 ALKEA 446 (447)
T ss_pred HHHhh
Confidence 98864
No 183
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=3.2e-24 Score=222.63 Aligned_cols=372 Identities=13% Similarity=0.068 Sum_probs=235.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ ++|+..|.... ..+++ ++.+++++.+++.+.
T Consensus 26 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~ql~~~ 73 (443)
T PRK08360 26 VPVKAENAKVWDIEGNE------YIDFLSDAAVQ----------------------NVGHN----NPRVVKAIKEQTDKL 73 (443)
T ss_pred eEEecceeEEEECCCCE------EEEccccHhhc----------------------ccCCC----CHHHHHHHHHHHHhc
Confidence 45667777777777777 78886664322 11222 689999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
. .+.......+.+..+|+.+.+..+ ...+.|+++++|+||++.+++..+...| .+|+....+|++....+..
T Consensus 74 ~-----~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s 146 (443)
T PRK08360 74 I-----HYTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMS 146 (443)
T ss_pred c-----CccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHH
Confidence 2 122211123444556666654432 2236899999999999999998863344 6788888899986533222
Q ss_pred -hCC------------eEEEEecCCCC--CCC--------CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC-HH
Q 009517 235 -HGG------------TLVPYYLDEAT--GWG--------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA-EE 290 (533)
Q Consensus 235 -~g~------------~~~~v~~~~~~--~~~--------ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s-~~ 290 (533)
.|. .+..+|+.... .+. -+++.+++.++.. ..+.++++|+++..+||||.+++ ++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~ 225 (443)
T PRK08360 147 LTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPED 225 (443)
T ss_pred hcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHH
Confidence 221 12223222110 011 1234455656431 11237889988866899998776 66
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
.+++|.++|++||+++|+||+|++|.+.|. +.+... .++ .+| +.+|||++ | +|+|+||+++ ++
T Consensus 226 ~l~~l~~l~~~~g~llI~DEv~~g~gr~G~--~~a~~~--~~~---~pD-----iitlsK~l-~-~G~pigav~~---~~ 288 (443)
T PRK08360 226 YFKKLKKILDEHGILLVVDEVQSGLGRTGK--WFAIEH--FGV---EPD-----IITLGKPL-G-GGLPISATIG---RA 288 (443)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCcc--chhhhh--cCC---CCC-----EEEecccc-c-CCceeEEEEE---cH
Confidence 799999999999999999999999877653 222111 122 566 34789999 5 7999999998 89
Q ss_pred HHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCC
Q 009517 371 EVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAE 445 (533)
Q Consensus 371 ~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~ 445 (533)
++++.+..... .+++.+++.++++.++|+. .+. +.+.++.+++.+++++.|+++ +.+..+++.
T Consensus 289 ~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-----------l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~ 356 (443)
T PRK08360 289 EIMDSLPPLAHAFTLSGNPVASAAALAVIEE-----------IEE-KNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGI 356 (443)
T ss_pred HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHH-----------HHH-cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecc
Confidence 99988865533 6788899999999888742 111 234555666666666666543 445567777
Q ss_pred ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 446 GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
|.|+.+ .+..+... ..........+. ..+.++||++.+. +.+.+||++. +++++|++++++|+++
T Consensus 357 Gl~~gi-e~~~~~~~----~~~~~~~~~~~~-~~l~~~Gi~~~~~-------~~~~lr~~P~l~~t~~~id~~~~~l~~~ 423 (443)
T PRK08360 357 GLMIGV-DLVKDRET----KERAYEEAAKVV-WRAWELGLIVTFF-------SGNVLRIQPPLTIEKEVLDEGLDILEEA 423 (443)
T ss_pred ceEEEE-EEecCCcc----cCccHHHHHHHH-HHHHHCCeEEeec-------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 766543 22111000 000000012333 4456789998752 1237999774 8999999999999999
Q ss_pred HHHHHH
Q 009517 524 HKNFMD 529 (533)
Q Consensus 524 l~~~~~ 529 (533)
++.+.+
T Consensus 424 l~~~~~ 429 (443)
T PRK08360 424 IEDVEE 429 (443)
T ss_pred HHHHHh
Confidence 987643
No 184
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.93 E-value=4.1e-24 Score=224.22 Aligned_cols=293 Identities=17% Similarity=0.213 Sum_probs=200.1
Q ss_pred HHHHHHH---HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hCCeEEEEe
Q 009517 171 GLRDTIA---AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYY 243 (533)
Q Consensus 171 ~lr~aia---~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~ 243 (533)
.++++++ +++.+.+| .+.+++++|+|+++++..++.++...+||+|+++++.|+.+...+.. .|++++.++
T Consensus 109 g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~ 186 (447)
T PRK00451 109 GTLQAIFEYQTMICELTG--MDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVP 186 (447)
T ss_pred HHHHHHHHHHHHHHHHhC--CCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEec
Confidence 3555555 44466677 45668999999999999888876425899999999999998877665 699999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE--ccccccccccCCC
Q 009517 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA--DEVYQENVYVPEK 321 (533)
Q Consensus 244 ~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~--De~y~~~~~~~~~ 321 (533)
+++ + .+|++++++++++ ++++|++++| ||||.+.+ +++|+++|+++|+++|+ |.+..++...
T Consensus 187 ~~~--~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~~--- 250 (447)
T PRK00451 187 YED--G-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLKP--- 250 (447)
T ss_pred CCC--C-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCCC---
Confidence 875 3 7899999999976 7999999999 89999977 99999999999999988 5443221100
Q ss_pred CcccHHHHHhhcCCCCCCceEEEEe---cCCccCCCCCCCeeEEEEEecCCHHHHHHHH---------------------
Q 009517 322 KFHSFKKVSRSMGYGEKDISLVSFQ---SVSKGYYGECGKRGGYMEVTGFSAEVREQIY--------------------- 377 (533)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~vi~i~---S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~--------------------- 377 (533)
+ .++ ..| +++. +|||.+ .++|+++||+.+ ++++++.+.
T Consensus 251 ~--------~~~---~~D---~~~~s~~k~~~~~-~~~Gpg~G~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 312 (447)
T PRK00451 251 P--------GEY---GAD---IVVGEGQPLGIPL-SFGGPYLGFFAT---RKKLVRQMPGRLVGETVDADGKRGFVLTLQ 312 (447)
T ss_pred c--------ccC---CCC---EEEECCCcCCCCC-CCCCCCchHHHh---hHHHHhhCCCCEeeeecccCCCeeeEeecc
Confidence 0 011 233 3333 788887 678999999987 788877641
Q ss_pred -------Hhhh-ccccCChHHH-HHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcee
Q 009517 378 -------KVAS-VNLCSNISGQ-ILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAM 448 (533)
Q Consensus 378 -------~~~~-~~~~~~~~~q-~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~ 448 (533)
.... ...+.+...+ .++...+... -.+.++++.+++.++++++.+.|++++|+.+. .+.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~---------~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~ 381 (447)
T PRK00451 313 AREQHIRREKATSNICTNQALNALAAAIYMSLL---------GPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPF 381 (447)
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHHH---------CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCe
Confidence 1111 1122222222 2222222100 01346778889999999999999998788775 4555
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceE-EEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIV-LVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~-v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
|.++-++.+. +...++++++ ++||. ..++..|+. ...+++|+++. .++++|+++++.|++++
T Consensus 382 ~~~~~v~~~~------------~~~~~~~~L~-~~gi~~~~~~~~~~~-~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 382 FNEFVVRLPK------------PAEEVNEALL-EKGILGGYDLGRYYP-ELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred EEEEEEecCC------------CHHHHHHHHH-hcCCCCCcccccccC-CcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 5442222211 1344555555 45665 456666652 22348999995 78889999999998754
No 185
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=3.8e-24 Score=221.08 Aligned_cols=372 Identities=12% Similarity=0.054 Sum_probs=232.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
.+.++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 25 ~i~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~ql~~l 72 (425)
T PRK07495 25 YADRAENAEIWDKEGRR------YIDFAAGIAVV----------------------NTGHR----HPRVIAAVKAQLDRF 72 (425)
T ss_pred eEEeeeecEEEeCCCCE------EEEccccHHhh----------------------ccCCC----CHHHHHHHHHHHhhc
Confidence 44567777777778877 77776554321 11111 688999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. ....+.+ .+....+++.+.+..+. -..++++++++|++|++.+++..+...| .+|+....+|++.......
T Consensus 73 ~~-~~~~~~~----~~~~~~la~~l~~~~p~-~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~ 146 (425)
T PRK07495 73 TH-TCHQVVP----YENYVRLAERLNALVPG-DFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMS 146 (425)
T ss_pred cC-cccCccC----CHHHHHHHHHHHHhCCC-CCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhh
Confidence 21 0111122 23334455555543221 0126899999999999999998763334 6799999999987644332
Q ss_pred h-CC-------------eEEEEecCCCCCCCCC----HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc-cCCCHHHHHHH
Q 009517 235 H-GG-------------TLVPYYLDEATGWGLE----TSEVKKQLEAAKAKGITVRALVVINPGNPTG-QVLAEENQRAI 295 (533)
Q Consensus 235 ~-g~-------------~~~~v~~~~~~~~~ld----~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG-~~~s~~~l~~i 295 (533)
. |. .+..+|.... ..+.+ ++.+++.+... ..+.++++||++..+.-+| .++|++.+++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l 224 (425)
T PRK07495 147 LTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGEGGFYPAPAAFMKAL 224 (425)
T ss_pred hcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHH
Confidence 2 11 1223333211 11223 34445555421 1123688888775433388 46899999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
.++|++||+++|+||+|++|.+.|. ...+.. .+..+| +.+|||.+ + .|+|+||+++ ++++++.
T Consensus 225 ~~l~~~~g~llI~DEv~tG~gr~G~--~~a~~~-----~gv~pD-----i~tlsK~l-~-~G~pigav~~---~~~i~~~ 287 (425)
T PRK07495 225 RELCDQHGILLIADEVQTGFARTGK--LFAMEH-----HEVAAD-----LTTMAKGL-A-GGFPLAAVTG---RAEIMDA 287 (425)
T ss_pred HHHHHHcCCEEEEechhhcCCcCCC--ceeecc-----cCCCCC-----EEeehhhh-c-CCccceEEEE---cHHHHhc
Confidence 9999999999999999999876653 211111 111456 78999999 4 6999999998 8999887
Q ss_pred HHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCceeEE
Q 009517 376 IYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEGAMYL 450 (533)
Q Consensus 376 l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~gg~~~ 450 (533)
+.... ..+++.++++++++.++|+ +.+ -..+.++.+++.+++++.|+++ |.+.-++.. |+++
T Consensus 288 ~~~~~~~~T~~~~pl~~aaa~a~l~-----------~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~ 354 (425)
T PRK07495 288 PGPGGLGGTYGGNPLGIAAAHAVLD-----------VIE-EEDLCERANQLGNRLKQRLASLRETVPEIADIRGP-GFMN 354 (425)
T ss_pred cCCCCcCCCCCCCHHHHHHHHHHHH-----------HHH-hchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-ceEE
Confidence 75433 3678899999998887774 111 1234445555555565555543 445555565 5677
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
|+.+..+.. ..........+.+.+.++||++.+.... .+.+||.+. ++++++++++++|++++++++
T Consensus 355 ~iel~~~~~------~~~~~~~~~~~~~~~~~~Gvl~~~~g~~-----~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 355 AVEFNDADS------GLPSAEFANRVRLKALEKGLILLTCGVH-----GNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred EEEEecCCC------CCccHHHHHHHHHHHHHCCeEEeecCCC-----CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 876642210 0000001122334556789999763211 238999985 899999999999999998765
No 186
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=1.6e-23 Score=212.75 Aligned_cols=306 Identities=15% Similarity=0.146 Sum_probs=208.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC----
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND---- 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd---- 216 (533)
|+++++++.+...+ |. +..++++++++++.+.+| .+++++|+|+++|+.+++.+++ ++||
T Consensus 26 ~~~v~~a~~~~~~~--------~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~~al~al~-~~Gd~~~~ 89 (363)
T TIGR01437 26 SDEVADAQKRGAQN--------YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIAQSVAAVI-TRGNRYLV 89 (363)
T ss_pred CHHHHHHHHHHHhc--------CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHHHHHHHHh-cCCCcchh
Confidence 89999998887653 32 256788888888887766 4579999999999999999998 7888
Q ss_pred -----------eEEEcCCcCcch----HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-EeCCC
Q 009517 217 -----------GILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINPG 280 (533)
Q Consensus 217 -----------~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~ii-l~~p~ 280 (533)
+|+++.|.|..| ...+...|++++.++.+ +.+|+++++++|++ ++++++ +++|+
T Consensus 90 ~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~------~t~ai~~v~~~~ 159 (363)
T TIGR01437 90 ENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITE------KTAAILYIKSHH 159 (363)
T ss_pred hcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcCh------hceEEEEEecCC
Confidence 999999888866 56778889999988763 46999999999987 788776 56889
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee
Q 009517 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (533)
Q Consensus 281 NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri 360 (533)
||+|.+.+ +++|+++|++||+++|+|++|.. . .. .. ..+ ..| +++.|++|++ +|+++
T Consensus 160 ~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~----~---~~---~~-~~~---g~D---~~~~S~~K~l---~gp~~ 216 (363)
T TIGR01437 160 CVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE----D---LQ---KY-YRL---GAD---LVIYSGAKAI---EGPTS 216 (363)
T ss_pred CCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC----c---hH---HH-HHc---CCC---EEEEeCCccc---CCCce
Confidence 99999998 77899999999999999999962 1 01 11 111 123 6788999977 48899
Q ss_pred EEEEEecCCHHHHHHHHHhhhc---c---ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 361 GYMEVTGFSAEVREQIYKVASV---N---LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 361 G~v~~~~~~~~~~~~l~~~~~~---~---~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
|+++. ++++++.+...... . ...+..++.++...+ .+......+.+.++++.+.+.|.
T Consensus 217 G~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~-------------~~~~~~~~~~~~~~~~~l~~~L~ 280 (363)
T TIGR01437 217 GLVLG---KKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQY-------------LSTGKESGAEMVAKLTPFIEALN 280 (363)
T ss_pred EEEEE---cHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHH-------------HccCcccHHHHHHHHHHHHHHHh
Confidence 99987 88888776543221 0 111122333322222 11122333445566778999999
Q ss_pred cCCCceEecCC--ceeEE-ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccc--eEEEcCCCCCCCCCCceEEEEec-C
Q 009517 435 SLEGITCNKAE--GAMYL-FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATG--IVLVPGSGFGQVPGTWHFRCTIL-P 508 (533)
Q Consensus 435 ~~~g~~~~~~~--gg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--V~v~pg~~f~~~~g~~~iRis~~-~ 508 (533)
++||+.+..+. .+... ...+.+.. +..+. +...+. +.|++.+ |.+++ .|. ..+ .+|+++. .
T Consensus 281 ~i~g~~~~~~~~~~~~~~~~~~v~~~~------~~~g~-~~~~l~-~~L~~~~~~I~~r~--~~~-~~~--~~~l~~~~~ 347 (363)
T TIGR01437 281 TLKGVSASIVQDEAGRDIARAEIRFDE------SELGM-TAADVV-QALRQGEPAIYTRG--YKA-NEG--IIEIDPRSV 347 (363)
T ss_pred cCCCeEEEEecCCCCCcCceEEEEEec------cCCCC-CHHHHH-HHHhcCCCCEEEee--eee-cCC--eEEEEeecC
Confidence 99998876422 11110 00011110 00112 223333 5566666 66665 233 344 7899996 7
Q ss_pred CcCcHHHHHHHHHHHH
Q 009517 509 QEDKIPAIVTRLTDFH 524 (533)
Q Consensus 509 ~~e~i~~~~~~l~~~l 524 (533)
+++|++.++++|++++
T Consensus 348 ~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 348 TGGQLDIIVERIREIV 363 (363)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 8889999999988753
No 187
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.93 E-value=1.2e-23 Score=218.11 Aligned_cols=372 Identities=11% Similarity=0.046 Sum_probs=229.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 24 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~ql~~~ 71 (425)
T PRK09264 24 VFDKAKGSWLYDEDGKE------YIDFFAGAGAL----------------------NYGHN----NPVLKQALIDYLQRD 71 (425)
T ss_pred cEEeeecCEEEeCCCCE------eeecccchhhc----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 56777777777788888 77765554321 11111 689999999998753
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEE-cCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFL-TDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASI 232 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~-t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~ 232 (533)
.......+ ..+.+..+++.+.+....+...+ .+++ +++|++|++.+++.++..+| .+|+....+|++.....
T Consensus 72 ~~~~~~~~-----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ 146 (425)
T PRK09264 72 GITHGLDM-----HTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGS 146 (425)
T ss_pred cccccccc-----CcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHH
Confidence 21011111 12344445555543211111122 5656 58999999999998863344 67899999999976543
Q ss_pred HHh-CC------------eEEEEecCCCCCCC-CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHH
Q 009517 233 ALH-GG------------TLVPYYLDEATGWG-LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVD 297 (533)
Q Consensus 233 ~~~-g~------------~~~~v~~~~~~~~~-ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~ 297 (533)
... |. .+..+|........ -|++.+++.+.+......++.+||+...+...|+ +++++.+++|.+
T Consensus 147 ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~ 226 (425)
T PRK09264 147 LAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAK 226 (425)
T ss_pred HHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHH
Confidence 332 11 12333332110000 2677888888653211125778888877776786 678899999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||+++|+||++++|...|. ... .+..+..|| +.+|||.+ |..|+|+|++++ ++++. .+.
T Consensus 227 lc~~~g~llI~DEV~tG~GrtG~--~~~-----~~~~~v~PD-----i~t~~K~l-~~~G~pigav~~---~~~i~-~~~ 289 (425)
T PRK09264 227 LCRKHDILLIVDDIQAGCGRTGT--FFS-----FERAGITPD-----IVTLSKSI-SGYGLPMALVLI---KPELD-VWK 289 (425)
T ss_pred HHHHcCcEEEEechhhCCccccH--HHH-----HhhcCCCCC-----EEEecccc-CCCccceEEEEE---chhhh-ccC
Confidence 99999999999999999766553 111 111122577 45789999 545999999998 77763 433
Q ss_pred Hh-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCCceeEEec
Q 009517 378 KV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAEGAMYLFP 452 (533)
Q Consensus 378 ~~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~gg~~~~~ 452 (533)
.. ...+++++++++.++.++|.. .. .-..+.++++++.+++++.|+++ |.+.......|+++++
T Consensus 290 ~~~~~~T~~gnp~~~aaa~a~l~~----------~~-~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i 358 (425)
T PRK09264 290 PGEHNGTFRGNNLAFVTATAALEE----------YW-SDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGI 358 (425)
T ss_pred CCccCCCCCCCHHHHHHHHHHHHH----------HH-hhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEE
Confidence 22 235678888888877666621 11 11234555666666666665543 3221112224556675
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
.+..+. ....++ ..+.++||.+.++..++ ..||+++. +++++|++++++|+++++++.++
T Consensus 359 ~l~~~~------------~~~~l~-~~~~~~Gv~~~~~~~~~-----~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 359 DFGDGE------------LAGKIA-AEAFENGLIIETSGPED-----EVVKLLPPLTIDEEELEEGLDILEEAVAEVLAE 420 (425)
T ss_pred EecChH------------HHHHHH-HHHHHCCCEEeccCCCC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 554211 122333 45567899998754332 37899975 89999999999999999887643
No 188
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.93 E-value=7.3e-24 Score=218.65 Aligned_cols=367 Identities=10% Similarity=0.035 Sum_probs=225.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 20 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~ql~~~ 67 (412)
T TIGR02407 20 VFEKAKGSTLWDEDGKE------YIDFFAGAGAL----------------------NYGHN----NPKLKQALIDYLADD 67 (412)
T ss_pred eEEecccCEEEeCCCCE------EEEcccchhhc----------------------cCCCC----CHHHHHHHHHHHhhc
Confidence 55677777777778887 77776554322 11222 699999999998753
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCC-CCCCEEE-cCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFL-TDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASI 232 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~-~~~~i~~-t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~ 232 (533)
.. .. .. ....+.+..+++.+.+....+. ..+.+++ +++|++|++.+++..+..+| .+|+....+|++....+
T Consensus 68 ~~--~~--~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a 142 (412)
T TIGR02407 68 GI--IH--SL-DMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGS 142 (412)
T ss_pred cc--ee--cc-ccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHH
Confidence 21 11 11 1123444555555554311011 1135655 58999999999999863344 67999999999977554
Q ss_pred HHh-CC------------eEEEEecCCCCCCC-CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHH
Q 009517 233 ALH-GG------------TLVPYYLDEATGWG-LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVD 297 (533)
Q Consensus 233 ~~~-g~------------~~~~v~~~~~~~~~-ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~ 297 (533)
... |. .+..+|........ -+++.+++.+.+......++.+||+...++++|+ +++++.+++|.+
T Consensus 143 ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~ 222 (412)
T TIGR02407 143 LSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEK 222 (412)
T ss_pred HHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHH
Confidence 432 21 12222221100000 1366788877643211125788888777888998 678999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC-CCeeEEEEEecCCHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC-GKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~-G~riG~v~~~~~~~~~~~~l 376 (533)
+|++||+++|+||++++|...|. ... .+..+..|| +.+|||.+ | + |+|+||+++ ++++ ..+
T Consensus 223 lc~~~g~llI~DEV~tG~GRtG~--~~a-----~~~~~v~PD-----i~~~~K~l-g-~~G~pigav~~---~~~~-~~~ 284 (412)
T TIGR02407 223 LCRRHDILLIVDDIQAGCGRTGT--FFS-----FEPAGIEPD-----IVCLSKSI-S-GYGLPLALTLI---KPEL-DVW 284 (412)
T ss_pred HHHHcCCEEEEechhhCCCccch--hHH-----hcccCCCCC-----EEEechhc-c-CCccceeEEEE---chhh-hcc
Confidence 99999999999999999766553 111 111222677 55789999 5 5 899999998 7765 444
Q ss_pred HHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecCCceeEEe
Q 009517 377 YKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKAEGAMYLF 451 (533)
Q Consensus 377 ~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~gg~~~~ 451 (533)
.... ..++++++++++++.+.|+. +.+ .....++.++..+++.+.|++ ++++.......|+++|
T Consensus 285 ~~~~~~~T~~gnpl~~aaa~a~l~~----------~i~-~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~ 353 (412)
T TIGR02407 285 KPGEHNGTFRGNNLAFVTATAALEY----------YWS-DDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQG 353 (412)
T ss_pred CCCccCCCCCccHHHHHHHHHHHHH----------Hhc-ccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEE
Confidence 3222 36788899988887776641 011 012333334444444444432 3322233344567788
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
+.+..+. ....+. ..+.++||++.+...+ .+.|||++. ++++++++++++|++++++
T Consensus 354 l~l~~~~------------~~~~~~-~~~~~~Gv~v~~~~~~-----~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 354 IECGDGD------------LAGKIA-KAAFENGLIIETSGPN-----DEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred EEecChH------------HHHHHH-HHHHHCCCEEeccCCC-----CCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 6654211 112333 4556789999874322 237999995 8999999999999998853
No 189
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=2.2e-23 Score=214.13 Aligned_cols=322 Identities=14% Similarity=0.153 Sum_probs=215.4
Q ss_pred CHHHHHHHHHHHhcCCCC-CccccCC----CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC
Q 009517 141 SADSIERAWQILDQIPGR-ATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~-~~~~Y~~----~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
|+.+.+++.+.+...... ....|.. ..+..++|+.++++++. ...++|++|+|+++++..++..++ ++|
T Consensus 13 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~v~~~~g~t~al~~~~~~~~-~~g 86 (376)
T TIGR01977 13 PDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-----PSSAHVVFTNNATTALNIALKGLL-KEG 86 (376)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHhcc-CCC
Confidence 788888888887753210 1223433 24567888888888752 123589999999999999999987 799
Q ss_pred CeEEEcCCcCcchHH----HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 216 DGILCPIPQYPLYSA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
|+|+++.++|..+.. .++..|.+++.++.+. ++.+|++++++++++ ++++|++++|+||||.+++
T Consensus 87 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~--- 155 (376)
T TIGR01977 87 DHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKT------NTKLIVVSHASNVTGTILP--- 155 (376)
T ss_pred CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCC------CCeEEEEECCCCCccccCC---
Confidence 999999999887653 3445699999998864 457899999999965 7899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
+++|.++|+++|+++|+|++++.... + ..+ ... ..| +++.|++|.+.|++| +|.+++. +..
T Consensus 156 ~~~i~~l~~~~~~~livD~a~~~g~~----~-~~~----~~~---~~D---~~~~s~~K~l~~p~g--~g~l~~~--~~~ 216 (376)
T TIGR01977 156 IEEIGELAQENGIFFILDAAQTAGVI----P-IDM----TEL---AID---MLAFTGHKGLLGPQG--TGGLYIR--EGI 216 (376)
T ss_pred HHHHHHHHHHcCCEEEEEhhhccCcc----C-CCc----hhc---CCC---EEEecccccccCCCC--ceEEEEc--CCc
Confidence 77889999999999999999975221 1 111 111 234 778899998854444 4555541 322
Q ss_pred HHHHHHHh----------------hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 009517 372 VREQIYKV----------------AS-VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 372 ~~~~l~~~----------------~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L 433 (533)
.+..+... .. ...+++.....++..+++ .+.+ ..+.++++.+++.+.+.+.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~l~~~~~~~l 286 (376)
T TIGR01977 217 KLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIK----------FIEKIGIANIAKKECMLTEKLLNGL 286 (376)
T ss_pred CcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHH----------HHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 11111100 00 112334444444444442 1211 23567778888899999999
Q ss_pred hcCCCceEecC-----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-------CCCCce
Q 009517 434 NSLEGITCNKA-----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-------VPGTWH 501 (533)
Q Consensus 434 ~~~~g~~~~~~-----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-------~~g~~~ 501 (533)
.+++|+.++.+ .+++ +++.++ . . +...+...+.+++||.+.+|..+.. ....+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~-v~~~~~--~----------~-~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~ 352 (376)
T TIGR01977 287 REINKVKIYGPADPANRVGV-VSFTVE--G----------I-DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGT 352 (376)
T ss_pred hcCCCeEEeCCCCccccCCe-EEEEEC--C----------C-CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCe
Confidence 98878887654 2332 332232 1 1 2233444444444999999876642 123348
Q ss_pred EEEEec--CCcCcHHHHHHHHHH
Q 009517 502 FRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 502 iRis~~--~~~e~i~~~~~~l~~ 522 (533)
|||++. +++++++.++++|++
T Consensus 353 iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 353 IRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEecCCCCCHHHHHHHHHHHhh
Confidence 999996 889999999999875
No 190
>PRK06460 hypothetical protein; Provisional
Probab=99.93 E-value=3.5e-23 Score=210.99 Aligned_cols=215 Identities=13% Similarity=0.167 Sum_probs=154.1
Q ss_pred cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC----cchHHHHHHhCCeEEEE
Q 009517 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY----PLYSASIALHGGTLVPY 242 (533)
Q Consensus 167 ~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~----~~~~~~~~~~g~~~~~v 242 (533)
....+|++++|++++ .+ ..+++ +++++|+..++..++ ++||+|+++.|.| ..|...++..|+++..+
T Consensus 45 p~~~~L~~~lA~l~g------~~-~~v~~-~sG~~ai~~~l~al~-~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 45 PTVLELTKKIVELEN------AE-MGVAF-SSGMGAISTTALALL-KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred ccHHHHHHHHHHHhC------CC-cEEEe-CCHHHHHHHHHHHHh-CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 347899999999975 22 23444 556799999999988 7999999997654 45567778889998887
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCC
Q 009517 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 243 ~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~ 322 (533)
+.+. .+.+++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..... .
T Consensus 116 ~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~-~--- 175 (376)
T PRK06460 116 NPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPIN-Q--- 175 (376)
T ss_pred CCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcccc-C---
Confidence 7542 2334443333 7899999999999999999 66789999999999999999975321 1
Q ss_pred cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCC
Q 009517 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~ 401 (533)
. .+ .. . ..|++.|+||.++|+.|.++||+++ ++++++.+.+... .+.+.++..+. .++..
T Consensus 176 -~---~l--~~---~---~divv~S~sK~l~G~~~~~~G~~~~---~~~l~~~l~~~~~~~g~~~~~~~a~---~~l~~- 236 (376)
T PRK06460 176 -K---PL--EL---G---ADIVVHSASKFLAGHNDVIAGLAAG---YGKLLNVIDQMRRTLGTSLDPHAAY---LTLRG- 236 (376)
T ss_pred -C---hh--hc---C---CCEEEeecceeccCCCCceEEEEec---CHHHHHHHHHHHHhcCCCCCHHHHH---HHHhc-
Confidence 0 11 11 1 2388999999985444478999987 8999998887654 33334443332 22321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.++++...+++.++++.+.+.|++.|.+
T Consensus 237 ----------~~~l~~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 237 ----------IKTLKIRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred ----------hhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 2345566778888999999999987654
No 191
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=1.8e-24 Score=224.44 Aligned_cols=360 Identities=13% Similarity=0.059 Sum_probs=228.3
Q ss_pred HHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCC
Q 009517 77 VSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (533)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~ 156 (533)
..++++...++.++++ ++|+..|.+.. ..+.+ ++.+++++.+++.+.
T Consensus 36 ~~~a~G~~l~d~dG~~------~lD~~~g~~~~----------------------~lGh~----~p~i~~a~~~~~~~~- 82 (426)
T PRK00062 36 IERAKGAYLYDVDGNE------YIDYVGSWGPM----------------------ILGHA----HPEVVEAVIEAAEKG- 82 (426)
T ss_pred EEeCcCCEEEeCCCCE------EEEcccchhhh----------------------hcCCC----CHHHHHHHHHHHHhC-
Confidence 3445555444445555 99998886553 11111 789999999999872
Q ss_pred CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-CCCeEEEcCCcCcchHHHHHHh
Q 009517 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIALH 235 (533)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-~gd~Vlv~~p~~~~~~~~~~~~ 235 (533)
...|.+..+..+|.+.+++.+ ...+.++++++|++|++.+++.++.. .+++|+..+++|+++...+...
T Consensus 83 ---~~~~~~~~~~~~la~~L~~~~-------~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~ 152 (426)
T PRK00062 83 ---LSFGAPTELEVELAELVIELV-------PSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVK 152 (426)
T ss_pred ---CcCCCCCHHHHHHHHHHHHhC-------CCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhc
Confidence 233455555666666666654 13568999999999999999987521 2578999999999987444332
Q ss_pred -CCe------------EE-----EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC-HHHHHHHH
Q 009517 236 -GGT------------LV-----PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA-EENQRAIV 296 (533)
Q Consensus 236 -g~~------------~~-----~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s-~~~l~~i~ 296 (533)
|.. .. .+... ..|++.+++.+... +.++++|+++....-+|.+.+ .+.+++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~ 224 (426)
T PRK00062 153 AGSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLR 224 (426)
T ss_pred cCccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHH
Confidence 110 00 01110 13789999888642 236788888854444887765 88899999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+||+|.++.. +. .... .. .++ .|| +.+|||.+ + .|||+|++++ ++++++.+
T Consensus 225 ~l~~~~~~llI~DEv~~G~r~-g~--~~~~-~~-~~~---~pD-----i~~~gK~l-~-~G~p~ga~~~---~~~i~~~~ 286 (426)
T PRK00062 225 ELCDEHGALLIFDEVMTGFRV-AL--GGAQ-GY-YGV---TPD-----LTTLGKII-G-GGLPVGAFGG---RREIMEQL 286 (426)
T ss_pred HHHHHcCCEEEEeechhcccc-CC--ccHH-HH-hCC---Ccc-----hHhhhhHh-h-CCCcceeeeE---HHHHHHhh
Confidence 999999999999999999843 32 1111 11 112 466 57899999 5 6999999988 89999888
Q ss_pred HHh---hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCceEecCCcee
Q 009517 377 YKV---AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAF----NSLEGITCNKAEGAM 448 (533)
Q Consensus 377 ~~~---~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~g~~~~~~~gg~ 448 (533)
... .. .+++++++.++++.+.|+... + +...++.+++.+++++.| .+.+.+..+++.|.|
T Consensus 287 ~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~----------~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~ 354 (426)
T PRK00062 287 APLGPVYQAGTLSGNPLAMAAGLATLKLLK----------E--PGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSM 354 (426)
T ss_pred ccCCCceecccCcCCHHHHHHHHHHHHHHh----------c--chHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecce
Confidence 522 22 567899999999988885211 1 123333333344444444 344323336678877
Q ss_pred EEecccCCCHH-HHHHHHhcC-CCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 449 YLFPRIQLPEK-AIKAAEAEK-TVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 449 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+.+. +..+.. ..... ..+ ......+ ...|.++||++.|.. + +.+++++.+++++|++++++|++++++
T Consensus 355 ~~i~-l~~~~~~~~~~~-~~~~~~~~~~i-~~~l~~~Gv~v~~~~-~------~~~~~~~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 355 FGLF-FTDEPVTNYADA-KKSDTERFARF-FHAMLDEGVYLAPSQ-F------EAGFVSAAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred EEEE-EecCCCcchhhh-ccccHHHHHHH-HHHHHHCCeEeecCC-c------CceeeeccCCHHHHHHHHHHHHHHHHh
Confidence 7653 221100 00000 000 0001233 345567899998731 1 156888889999999999999999876
Q ss_pred H
Q 009517 527 F 527 (533)
Q Consensus 527 ~ 527 (533)
+
T Consensus 425 ~ 425 (426)
T PRK00062 425 L 425 (426)
T ss_pred h
Confidence 4
No 192
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.93 E-value=6.3e-23 Score=210.88 Aligned_cols=218 Identities=15% Similarity=0.145 Sum_probs=165.5
Q ss_pred cC--CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhC
Q 009517 163 YS--HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHG 236 (533)
Q Consensus 163 Y~--~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g 236 (533)
|. +..+..+|++++|++++ .+++++++||++|+..++..++ ++||+|+++.|.|..+... +...|
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 128 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSAL-KAGDHVVASDTLYGCTFALLNHGLTRYG 128 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHhhCC
Confidence 55 56668999999999975 2468889999999999998888 8999999999988875543 46689
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQE 314 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~--~~~lI~De~y~~ 314 (533)
++++.++.. |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|..
T Consensus 129 ~~v~~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~ 192 (400)
T PRK06234 129 VEVTFVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCT 192 (400)
T ss_pred eEEEEECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCc
Confidence 998888643 78999999976 7999999999999999998 89999999997 999999999987
Q ss_pred ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHHHHHHhh-h--ccccCChHH
Q 009517 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVA-S--VNLCSNISG 390 (533)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~~l~~~~-~--~~~~~~~~~ 390 (533)
..+. .+ + +. ..| |++.|+||.+ +++|+++ ||+++ ++++++.+.... . .+.+.++..
T Consensus 193 ~~~~--~~---l-----~~---g~D---ivv~S~sK~l-~g~g~~~gG~v~~---~~~~~~~l~~~~~~~~~g~~l~p~~ 252 (400)
T PRK06234 193 PYIQ--RP---L-----QL---GAD---VVVHSATKYL-NGHGDVIAGFVVG---KEEFINQVKLFGIKDMTGSVIGPFE 252 (400)
T ss_pred hhcC--Cc---h-----hh---CCc---EEEeeccccc-cCCCCceeEEEEe---cHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 5442 11 1 11 123 8899999999 6688875 99987 888888776432 1 344556666
Q ss_pred HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 391 QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 391 q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.+.+...|+. +....++..++...+.+.|++.|.+
T Consensus 253 a~l~~~~l~t--------------l~~r~~~~~~na~~~a~~L~~~~~V 287 (400)
T PRK06234 253 AFLIIRGMKT--------------LQIRMEKHCKNAMKVAKFLESHPAV 287 (400)
T ss_pred HHHHHhccCc--------------HHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 6655555532 2334444556777788888776443
No 193
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.93 E-value=9.9e-24 Score=214.07 Aligned_cols=300 Identities=14% Similarity=0.100 Sum_probs=214.3
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-----------C--CCeEEEcCCcCcc
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----------E--NDGILCPIPQYPL 227 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----------~--gd~Vlv~~p~~~~ 227 (533)
..|....+..++++++++++.+.+|.+...+++++|+|+++++..++++++.. + ++.|+++.++|..
T Consensus 28 ~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~ 107 (345)
T cd06450 28 FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS 107 (345)
T ss_pred cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH
Confidence 44888888999999999999998886545568999999999999999987510 2 3478889999999
Q ss_pred hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
+...+...|.+++.++++++ +.+|++.|++++++....+.++++|++++|+||||.+.+ +++|+++|+++|++++
T Consensus 108 ~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~l~ 182 (345)
T cd06450 108 VEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLWLH 182 (345)
T ss_pred HHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCeEE
Confidence 98888888999999998754 489999999999875555657888999999999999866 8999999999999999
Q ss_pred EccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCC
Q 009517 308 ADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSN 387 (533)
Q Consensus 308 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~ 387 (533)
+|++|..+.+..... . ..... ..+. ..+..|++|.+. ++.++|++.+ +
T Consensus 183 vD~a~~~~~~~~~~~-~---~~~~~----~~~~-d~~~~s~~K~l~--~p~g~g~~~~---~------------------ 230 (345)
T cd06450 183 VDAAYGGFLLPFPEP-R---HLDFG----IERV-DSISVDPHKYGL--VPLGCSAVLV---R------------------ 230 (345)
T ss_pred EechhhHHHhhChhh-H---HHhcC----cccc-CEEEEchhHhhC--CCcchHHHHH---H------------------
Confidence 999998766422110 0 00000 1121 245679999763 4678888754 2
Q ss_pred hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCceeEEecccCCCHHHHHHHHh
Q 009517 388 ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-AEGAMYLFPRIQLPEKAIKAAEA 466 (533)
Q Consensus 388 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~~~~~~~~ 466 (533)
.+.+.++...+. ...+++++++..++++++.+.|.+++++.+.. ++.+++.|. +..+..
T Consensus 231 ~~~~~~~l~~l~------------~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~-~~~~~~------- 290 (345)
T cd06450 231 ALKLWATLRRFG------------RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFR-LKPSVK------- 290 (345)
T ss_pred HHHHHHHHHHHh------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEE-ECCcch-------
Confidence 334444444432 12346677778888999999999988887654 567776663 221100
Q ss_pred cCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--C-CcCcHHHHHHHHHH
Q 009517 467 EKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--P-QEDKIPAIVTRLTD 522 (533)
Q Consensus 467 ~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~-~~e~i~~~~~~l~~ 522 (533)
.+. +...+ .+.|.++|+.+.++..+. +..++|+++. . +.++++++++.|++
T Consensus 291 ~~~-~~~~i-~~~L~~~g~~~~~~~~~~---~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 291 LDE-LNYDL-SDRLNERGGWHVPATTLG---GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhH-HHHHH-HHHHHhcCCEEEEeeEEC---CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 000 11233 345667776666655443 2348999996 3 78899999998875
No 194
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.93 E-value=4.4e-23 Score=210.40 Aligned_cols=223 Identities=13% Similarity=0.143 Sum_probs=167.0
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH-h---
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL-H--- 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~-~--- 235 (533)
...|+.+. ..+|++++|++.+ .+++++++|+++|+..++..++ ++||+|+++.|+|......+.. .
T Consensus 45 Y~R~~~p~-~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all-~~GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 45 YSRSGNPT-RDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALL-GPDDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred ccCCCCch-HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 44565554 7889999999864 4689999999999999999998 8999999999999865443332 2
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|.++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+
T Consensus 115 ~~~v~~~d-------~~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~ 178 (382)
T TIGR02080 115 CFRVLFVD-------QGDEQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSP 178 (382)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 34444432 2378999999976 7999999999999999998 788999999999999999999764
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~ 394 (533)
.+.. + + . + ..| +++.|+||.+.|.+|++.|++++ .++++++.+..... .+.+.+++.+..+
T Consensus 179 ~~~~--p---l-~----~---gaD---ivv~S~sK~l~G~~~~~~G~i~~--~~~~~~~~l~~~~~~~g~~~sp~~a~l~ 240 (382)
T TIGR02080 179 ALQN--P---L-A----L---GAD---LVLHSCTKYLNGHSDVIAGAVIA--KDPQVAEELAWWANNLGVTGGAFDSYLT 240 (382)
T ss_pred ccCC--c---h-h----h---CCC---EEEeecceeccCCCCceeEEEEe--CCHHHHHHHHHHHHccCCCCCHHHHHHH
Confidence 3211 1 1 1 1 233 78899999987677899999876 36788888876655 4566777777766
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
..-|+ .+..+.++..++...+.+.|++.|.+.
T Consensus 241 lr~l~--------------tl~~R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 241 LRGLR--------------TLVARMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred Hcccc--------------hHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 54442 233345556677778888888765543
No 195
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=7.4e-23 Score=208.82 Aligned_cols=223 Identities=13% Similarity=0.131 Sum_probs=170.9
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----h
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----H 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~ 235 (533)
...|+.+. ...|++++|++.+ .+.+++++|+++++..++..++ ++||+|++++|+|++....+.. .
T Consensus 46 Y~R~~~pt-~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 46 YSRRGNPT-RDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred eeCCCCcc-HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 44556554 7889999999864 2469999999999999999988 8999999999999964433322 2
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|.++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 116 gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 116 CYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 34555442 3589999999876 7999999999999999998 788999999999999999999764
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~ 394 (533)
... .+ + . + ..| +++.|++|.++|..+.+.|++++ .++++++.+..... .+.+.+++.+..+
T Consensus 180 ~~~--~p---l-~----~---gaD---ivv~S~tK~l~G~~d~~~G~vi~--~~~~~~~~l~~~~~~~g~~~~p~~~~l~ 241 (386)
T PRK08045 180 ALQ--NP---L-A----L---GAD---LVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAWWANNIGVTGGAFDSYLL 241 (386)
T ss_pred ccC--Cc---h-h----h---CCC---EEEeecceeccCCCCceeEEEEe--CcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 321 11 1 1 1 234 78999999997777788999876 35778777765544 5667888888888
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
...|+ .+....++..+++..+.+.|++.|.+.
T Consensus 242 ~rgl~--------------tl~~R~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 242 LRGLR--------------TLVPRMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred Hhhhc--------------cHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 87774 245566777888888999998876654
No 196
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.92 E-value=8.2e-23 Score=212.60 Aligned_cols=383 Identities=13% Similarity=0.048 Sum_probs=233.2
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 24 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~i~~ai~~q~~~~ 71 (442)
T TIGR00709 24 AFAKAQGCWVTDVEGKE------YLDFLAGAGTL----------------------ALGHN----HPNMKQKILDYLQSG 71 (442)
T ss_pred eEEeccccEEEeCCCCE------EEEccccHhhh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 55667777777777777 77776554322 11222 689999999998763
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIA 233 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~ 233 (533)
... ...|.+ .+.+..+|+.+....+....... ++++++|+||++.+++..+..+| .+|+....+|++....+.
T Consensus 72 ~~~-~~~~~~----~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~ 146 (442)
T TIGR00709 72 LPL-HTLDLT----TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGAL 146 (442)
T ss_pred cCc-cccccC----cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHH
Confidence 210 111122 24445566666544321111124 45568999999999998863344 679999999999876554
Q ss_pred HhCC-------------eEEEEecCCCC--CCC----CCHHH----HHHHHHHHHhcCCCeeEEEEeCCCCCCc-cCCCH
Q 009517 234 LHGG-------------TLVPYYLDEAT--GWG----LETSE----VKKQLEAAKAKGITVRALVVINPGNPTG-QVLAE 289 (533)
Q Consensus 234 ~~g~-------------~~~~v~~~~~~--~~~----ld~~~----l~~~i~~~~~~g~~~~~iil~~p~NPtG-~~~s~ 289 (533)
.... .+..++..... .|+ .+.+. +++.+........++.+|+++..++..| +++++
T Consensus 147 s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~ 226 (442)
T TIGR00709 147 AVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPS 226 (442)
T ss_pred hhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCH
Confidence 4321 12222221110 011 01222 3333322111123678888886654445 56899
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+.+++|.++|++||+++|+||+|++|.++|. +..+.. .++.|| +.++||.+ |. |+|+|++++ +
T Consensus 227 ~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~~~-----~gv~PD-----iv~~gK~l-~~-G~Pigav~~---~ 289 (442)
T TIGR00709 227 EWLQKIREVTRKHDIKLILDEVQAGFGRSGT--MFAFEH-----AGIEPD-----FVVMSKAV-GG-GLPLAVLLI---A 289 (442)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCCCCc--hhHHHH-----cCCCCc-----EEEEcccc-cC-CcccEEEEE---c
Confidence 9999999999999999999999999877663 333222 122677 34489999 53 899999998 7
Q ss_pred HHHHHHHHH-hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecC
Q 009517 370 AEVREQIYK-VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKA 444 (533)
Q Consensus 370 ~~~~~~l~~-~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~ 444 (533)
++ ++.+.. ....|+++++++++++.+.|+. .+ .+.+.+.++++.++|.+.|+++ |.+.-++.
T Consensus 290 ~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~-----------i~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG 356 (442)
T TIGR00709 290 PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNY-----------WK-DDNLAQNAQERGERITSFLDDMIKEHPCIGNVRG 356 (442)
T ss_pred hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHH-----------HH-hcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence 76 344322 2237789999999999998841 11 1345667777777777777654 44566777
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCC-ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTV-PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
.|.|+.+ .+..+....+.......+ .....+...+.++||++.++... .+.+|+.+. +++++|++++++++
T Consensus 357 ~Gl~~~i-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~-----~~~l~~~Ppl~it~~ei~~~~~~l~ 430 (442)
T TIGR00709 357 RGLMQGI-MIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGRE-----GEVFRLLCPITIDQEECEEGISRFK 430 (442)
T ss_pred cceEEEE-EEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCC-----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 8876554 232111000000000000 01122334456789999863222 238899885 89999999999999
Q ss_pred HHHHHHHHHh
Q 009517 522 DFHKNFMDKF 531 (533)
Q Consensus 522 ~~l~~~~~~~ 531 (533)
++++++.++-
T Consensus 431 ~~l~~~~~~~ 440 (442)
T TIGR00709 431 QAVEEALAEV 440 (442)
T ss_pred HHHHHHHHHh
Confidence 9999886654
No 197
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=2.7e-22 Score=205.78 Aligned_cols=339 Identities=15% Similarity=0.121 Sum_probs=217.0
Q ss_pred CHHHHHHHHHHHhcCC---CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIP---GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~---~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
++++++++.+++.+.. ..+...|+...+..+|++++|++++. .+.+++++|.+... .++..+. ++||.
T Consensus 14 ~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~a~~-~~i~~l~-~~GD~ 84 (392)
T PLN03227 14 SPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILYSDGASTTS-STVAAFA-KRGDL 84 (392)
T ss_pred CHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHHHHH-HHHHHhC-CCCCE
Confidence 5788888888887522 11234588777889999999999852 35566666665555 6676677 89999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh--------cCCCeeEEEEeCCCCCCccCCCH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA--------KGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~--------~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
|+++++.|..+...+...+.+++.++.. |++++++.++.... ..+++++|++++++||+|.+++
T Consensus 85 Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~- 156 (392)
T PLN03227 85 LVVDRGVNEALLVGVSLSRANVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP- 156 (392)
T ss_pred EEEeccccHHHHHHHHHcCCeEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC-
Confidence 9999999999988888888877777643 34444444332211 1236888999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC-CceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK-DISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|+++|++||+++|+||+|. +...|..- ....+. .++ .+ ....|++.|+||.+ |++.|++++
T Consensus 157 --l~~i~~l~~~~g~~livDe~~~-~g~~g~~G-~g~~~~-~g~---~p~~~~Div~~slsk~~----g~~gg~v~~--- 221 (392)
T PLN03227 157 --LKELVALKEEFHYRLILDESFS-FGTLGKSG-RGSLEH-AGL---KPMVHAEIVTFSLENAF----GSVGGMTVG--- 221 (392)
T ss_pred --HHHHHHHHHHcCCEEEEECccc-ccccCCCC-CcHHHH-cCC---CCCCCceEEEeechhhh----hccCcEEec---
Confidence 8899999999999999999997 33323210 111111 011 22 12248888999976 567788877
Q ss_pred CHHHHHHHHHhhh-ccccC--ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe---
Q 009517 369 SAEVREQIYKVAS-VNLCS--NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN--- 442 (533)
Q Consensus 369 ~~~~~~~l~~~~~-~~~~~--~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--- 442 (533)
++++++.+..... .+++. +++.+.++..++.. . ...+.++++++++.+++++.|++. ++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~----------~-~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~ 289 (392)
T PLN03227 222 SEEVVDHQRLSGSGYCFSASAPPFLAKADATATAG----------E-LAGPQLLNRLHDSIANLYSTLTNS-SHPYALKL 289 (392)
T ss_pred CHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHH----------H-hcCHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence 8888877765432 34444 35556666544421 1 112456777888999999999763 32211
Q ss_pred cC-------CceeEEecccCCCHHHHHHHHhcCCCC---hHHHHHHHHHccceEEEcCCC-----C-CCCCCCceEEEEe
Q 009517 443 KA-------EGAMYLFPRIQLPEKAIKAAEAEKTVP---DAFYCRRLLNATGIVLVPGSG-----F-GQVPGTWHFRCTI 506 (533)
Q Consensus 443 ~~-------~gg~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gV~v~pg~~-----f-~~~~g~~~iRis~ 506 (533)
+. ..+..+.+.+...... . ...+ ...++ +.+.++||.+.+... + ..++ ..+|+++
T Consensus 290 rg~~~~~~~~~~~i~~i~~~~~~~~----~--~~~~~~~~~~~~-~~~~~~Gi~~~~~~~~~~~~~~~~P~--~~iR~~~ 360 (392)
T PLN03227 290 RNRLVITSDPISPIIYLRLSDQEAT----R--RTDETLILDQIA-HHSLSEGVAVVSTGGHVKKFLQLVPP--PCLRVVA 360 (392)
T ss_pred ccccccCCCCCCCEEEEEeCCHHHh----h--hhhhhhHHHHHH-HHHHHCCCEEEecccccCCcCCCCCC--ceEEEEe
Confidence 11 1122233223211100 0 0000 12333 455568999875211 1 1122 3789999
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHHHHhc
Q 009517 507 L--PQEDKIPAIVTRLTDFHKNFMDKFR 532 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l~~~l~~~~~~~~ 532 (533)
. +++|+|++++++|+++++++.-+|-
T Consensus 361 ~~~~t~eei~~~~~~l~~~~~~~~~~~~ 388 (392)
T PLN03227 361 NASHTREDIDKLLTVLGEAVEAILCKII 388 (392)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5 8999999999999999998765543
No 198
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=2.4e-22 Score=206.07 Aligned_cols=323 Identities=13% Similarity=0.094 Sum_probs=216.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc---CCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---SENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~~gd~ 217 (533)
.+.+++++.+++....+ ....|+ +..++.+.+.+.+.+.+| .+.+++++++|+++++..+++.+.. .++++
T Consensus 33 ~~~~~~a~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~ 106 (371)
T PRK13520 33 HPIARKAHEMFLETNLG-DPGLFP---GTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKPN 106 (371)
T ss_pred hHHHHHHHHHHHhcCCC-CcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCce
Confidence 46777888887765322 122232 344444445555554445 4456789999999999999887751 14789
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|++.++.|..+...++..|.+++.++.+. ++.+|++.|+++|++ ++++|++++++|+||.+.+ +++|.+
T Consensus 107 vl~~~~~h~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~ 175 (371)
T PRK13520 107 IVVPESAHFSFDKAADMLGVELRRAPLDD--DYRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSK 175 (371)
T ss_pred EEecCcchHHHHHHHHHcCceEEEecCCC--CCcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHH
Confidence 99999999999988888999999998864 457899999999987 6778888889999999998 999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|+++|+++++|++|.++...-......+ .+ . ..+.. .+..|..| + +++|.++|+++. .++++++.+.
T Consensus 176 l~~~~g~~livD~a~~~~~~~~~~~~~~~-~~--~----~~~vd-~~~~s~~K-~-~~a~~~~G~~~~--~~~~~~~~l~ 243 (371)
T PRK13520 176 IALENGIFLHVDAAFGGFVIPFLDDPPNF-DF--S----LPGVD-SITIDPHK-M-GLAPIPAGGILF--RDESYLDALA 243 (371)
T ss_pred HHHHcCCCEEEEecchhHHHHhhcCCCCc-cc--c----CCCCc-eEEECCcc-c-cCccCCceEEEE--cCHHHHHhhc
Confidence 99999999999999987542110000000 00 0 11222 33457778 4 456889998886 3666776654
Q ss_pred Hhhhc---------cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCce
Q 009517 378 KVASV---------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGA 447 (533)
Q Consensus 378 ~~~~~---------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg 447 (533)
..... ..+.+.....++..+|+... .+..+++.++..++++++.+.|+++ |+. +..+..+
T Consensus 244 ~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~---------~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 313 (371)
T PRK13520 244 VDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLG---------REGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLN 313 (371)
T ss_pred ccCccccCCCCcceEeeccChHHHHHHHHHhhhc---------HhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCce
Confidence 21110 01123344455555553110 1234567778888899999999988 887 5666666
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
++.+ .++ +...+. ..|.++||.+.++.. ..++|||+. .++++|+++++.|+++++
T Consensus 314 ~v~~-~~~---------------~~~~v~-~~L~~~gi~v~~~~~------~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 314 IVAF-DDP---------------NPDEVR-EKLRERGWRVSVTRC------PEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred EEEE-ecC---------------CHHHHH-HHHHHCCceeccCCC------CCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 5443 232 123333 445567999987431 238999985 788999999999988765
No 199
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.92 E-value=1.5e-22 Score=209.31 Aligned_cols=318 Identities=13% Similarity=0.132 Sum_probs=212.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------- 212 (533)
++++++++.+++.+.... ...+ ...-..+|.+.+++++ | .+.++++++|++|++.+++.++.
T Consensus 55 ~p~v~~a~~~~~~~~~~~-~~~~-~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~ 124 (401)
T TIGR01885 55 HPKIVKALTEQAQKLTLS-SRAF-YNDVFGEFAEYVTKLF----G----YDKVLPMNTGAEAVETAIKLARKWGYKVKGI 124 (401)
T ss_pred CHHHHHHHHHHHHhcccc-cccc-CCHHHHHHHHHHHhhc----C----CCEEEEeCccHHHHHHHHHHHHHHhhhhcCC
Confidence 689999999988764321 1111 1222345555555543 3 36899999999999999998631
Q ss_pred CC-CCeEEEcCCcCcch-HHHHHHhCC------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC
Q 009517 213 SE-NDGILCPIPQYPLY-SASIALHGG------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (533)
Q Consensus 213 ~~-gd~Vlv~~p~~~~~-~~~~~~~g~------------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~ 278 (533)
.+ .+.|+....+|++. ...+...+. .+..++. .|++++++.++.. ++++.+|+++.
T Consensus 125 ~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~ 194 (401)
T TIGR01885 125 PENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEP 194 (401)
T ss_pred CCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeC
Confidence 12 36788888888864 333333221 1222221 2789999988753 34678888888
Q ss_pred CCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 279 PGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 279 p~NPtG~~~s-~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
+++++|.+.+ .+.+++|.++|++||+++|+||+|.++.++|. ..++ +..+..+| +.+|||.+ +..|
T Consensus 195 v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~--~~~~-----~~~~~~~d-----i~~~gK~l-~~g~ 261 (401)
T TIGR01885 195 IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK--LLCV-----DHENVKPD-----IVLLGKAL-SGGV 261 (401)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hhHH-----hhcCCCCC-----EEEeeccc-cCCC
Confidence 8999999886 45699999999999999999999998766553 1111 11111355 23578999 5455
Q ss_pred CeeEEEEEecCCHHHHHHHHHh-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 358 KRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 358 ~riG~v~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
+|+||+++ ++++++.+... ...+++.+++.+.++.++|+. .+. +.+.++.+++.+++++.|+++
T Consensus 262 ~~ig~v~~---~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~-----------i~~-~~l~~~~~~~~~~~~~~L~~l 326 (401)
T TIGR01885 262 YPVSAVLA---DDDVMLTIKPGEHGSTYGGNPLACAVAVAALEV-----------LEE-EKLAENAEKLGEIFRDQLKKL 326 (401)
T ss_pred CCcEEEEE---cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH-----------HHh-ccHHHHHHHHHHHHHHHHHhc
Confidence 99999998 89998877652 235677889999999888742 111 134456677788899999887
Q ss_pred C-C-ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCc
Q 009517 437 E-G-ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDK 512 (533)
Q Consensus 437 ~-g-~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~ 512 (533)
+ . +..+++.|.|+.+. ++.+.. + .....++.. |.++||.+.|+. .+.+||++. +++++
T Consensus 327 ~~~~~~~~~g~g~~~~i~-~~~~~~--------~-~~~~~l~~~-l~~~Gv~v~~~~-------~~~lRi~p~l~~t~~~ 388 (401)
T TIGR01885 327 PKPIITEVRGRGLLNAIV-IDESKT--------G-RTAWDLCLK-LKEKGLLAKPTH-------GNIIRLAPPLVITEEQ 388 (401)
T ss_pred cCCceeEEeecCeeEEEE-eccCcc--------h-hHHHHHHHH-HHhCCEEEEecC-------CCEEEEeCCccCCHHH
Confidence 2 2 23456778777642 332110 0 012344444 457899998732 238999984 89999
Q ss_pred HHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFH 524 (533)
Q Consensus 513 i~~~~~~l~~~l 524 (533)
|++++++|++++
T Consensus 389 i~~~l~~l~~~l 400 (401)
T TIGR01885 389 LDEGLEIIKKVI 400 (401)
T ss_pred HHHHHHHHHHHh
Confidence 999999998876
No 200
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.92 E-value=1.5e-22 Score=207.33 Aligned_cols=213 Identities=13% Similarity=0.157 Sum_probs=159.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~g~~~~~v~~ 244 (533)
..+|++.+|++++ .+++++++|+++|+..++..++ ++||+|+++.+.|.+... .+...|++++.++.
T Consensus 63 ~~~le~~la~l~g--------~~~~v~~ssG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEG--------AEACVATASGMAAILAVVMALL-QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 6788888888864 4578999999999999999888 799999999998876443 45668999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .+
T Consensus 134 ~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~--~p-- 193 (390)
T PRK08133 134 T-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ--QP-- 193 (390)
T ss_pred C-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC--Cc--
Confidence 3 68999999876 7999999999999999998 899999999999999999998653321 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~ 402 (533)
+ .+ ..| +++.|+||.+ +.+|+++ ||+++ ++++++.+..... .....++..+.++..-+
T Consensus 194 -l-----~~---g~D---ivv~S~sK~~-~g~g~~~GG~vv~---~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl---- 253 (390)
T PRK08133 194 -L-----KL---GAD---VVIHSATKYL-DGQGRVLGGAVVG---SKELMEEVFGFLRTAGPTLSPFNAWVFLKGL---- 253 (390)
T ss_pred -h-----hh---CCc---EEEeecceee-cCCcceEeEEEEc---CHHHHHHHHHHHHHhCCCCCHHHHHHHHccc----
Confidence 1 11 133 7799999999 6689998 55555 7777776654443 33344555444433222
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
+.+..+.++..+++..+.+.|++.|++.
T Consensus 254 ----------~tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 254 ----------ETLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 2344555666778888999998876654
No 201
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=5.1e-23 Score=211.00 Aligned_cols=320 Identities=14% Similarity=0.109 Sum_probs=214.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-----CCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~~g 215 (533)
++++++++.+++.+.. ..+. ....++...+|+++.+.. ..+++++++++++|++.+++.++. .+|
T Consensus 54 ~p~v~~a~~~q~~~~~----~~~~--~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~ 123 (395)
T PRK03715 54 NPGMVEALAAQAEKLI----NPSP--AFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEANEGAIKLARKWGRKHKNG 123 (395)
T ss_pred CHHHHHHHHHHHHhcc----cccc--cccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCC
Confidence 5889999999987632 2222 124567778888887542 246899999999999999998851 123
Q ss_pred -CeEEEcCCcCcchHHHHHHh-CCeEEEEecCC-CCCC----CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC-
Q 009517 216 -DGILCPIPQYPLYSASIALH-GGTLVPYYLDE-ATGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL- 287 (533)
Q Consensus 216 -d~Vlv~~p~~~~~~~~~~~~-g~~~~~v~~~~-~~~~----~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~- 287 (533)
.+|+..+.+|++........ |.........+ ..++ ..|++.+++.+.+ ++++|+++..++..|...
T Consensus 124 r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~aavi~Epv~~~gG~~~~ 197 (395)
T PRK03715 124 AYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD------KTVAVMLEPVQGEGGVIPA 197 (395)
T ss_pred CcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC------CceEEEEeCCcCCCCCccC
Confidence 67999999999875544333 32211111000 0111 1378888888864 688888887788888764
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+++.+++|.++|++||+++|+||++++|...|. .. ..+..+..|| +.+|+|.++ .|+++|++++
T Consensus 198 ~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~--~~-----a~~~~gv~PD-----i~t~gK~lg--~G~p~~av~~-- 261 (395)
T PRK03715 198 TREFMQQLRALTKQHGLLLIVDEVQTGCGRTGT--LF-----AYELSGIEPD-----IMTLGKGIG--GGVPLAALLA-- 261 (395)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCCCcc--hh-----hHhhcCCCCc-----eeeehhhhh--CCcceEEEEE--
Confidence 688899999999999999999999999655553 11 1121222577 568899994 4899999987
Q ss_pred CCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEecC
Q 009517 368 FSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNKA 444 (533)
Q Consensus 368 ~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~ 444 (533)
.+++..........|++.++++++++.+.|+ ..++ +.+.++.+++.+++++.|+++ .++..++.
T Consensus 262 -~~~i~~~~~~~~~~T~~g~pl~~aaala~L~-----------~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG 328 (395)
T PRK03715 262 -KAEVAVFEAGDQGGTYNGNPLMTAVGVAVIS-----------QLLA-PGFLEGVRARGEYLKEKLLELSEERGLEGERG 328 (395)
T ss_pred -ccccccccCCCcCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEc
Confidence 7777532111223677889999998888874 2221 446667777777888877754 24555666
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHcc---ceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNAT---GIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTR 519 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~ 519 (533)
.|.|+.+ .+..+. ... +.+.+.+. ||++.+. +.+.+||++. +++++|++++++
T Consensus 329 ~Glm~~i-~l~~~~-------------~~~-~~~~~~~~~~~Gi~~~~~-------~~~~lR~~p~l~~t~~ei~~~~~~ 386 (395)
T PRK03715 329 EGLLRAL-LLGKDI-------------GPQ-IVEKARDMQPDGLLLNAP-------RPNLLRFMPALNVTTEEIDQMIAM 386 (395)
T ss_pred ceeEEEE-EecCch-------------HHH-HHHHHHhccCCCEEEeec-------CCCEEEEeCCcccCHHHHHHHHHH
Confidence 6655443 232110 111 22333334 9998742 1237999995 899999999999
Q ss_pred HHHHHHHH
Q 009517 520 LTDFHKNF 527 (533)
Q Consensus 520 l~~~l~~~ 527 (533)
|+++++++
T Consensus 387 l~~~l~~~ 394 (395)
T PRK03715 387 LRSVLDKL 394 (395)
T ss_pred HHHHHHhh
Confidence 99998764
No 202
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.92 E-value=1.1e-23 Score=219.10 Aligned_cols=391 Identities=14% Similarity=0.080 Sum_probs=241.7
Q ss_pred CCCCcccccCcCcccccCcc-ccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCC
Q 009517 51 TSSPAITVDSLNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPS 129 (533)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~ 129 (533)
.+++.+.+..+++.++...+ .+.+.++.++++...++.||++ +||+..|....
T Consensus 58 ~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~------yiD~~~g~g~~-------------------- 111 (474)
T PLN02482 58 KAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNE------YIDYVGSWGPA-------------------- 111 (474)
T ss_pred HHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCE------EEEeccccccc--------------------
Confidence 34455555566666655432 2333467888888888888888 88886664221
Q ss_pred CCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 009517 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (533)
Q Consensus 130 ~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 209 (533)
++... ++++++++.+++.+. . .|.. ..++...+|+.+.+... ..+++.++++|+||++.+++.
T Consensus 112 ~lGh~------~p~v~~av~~ql~~~----~-~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~e~Alkl 174 (474)
T PLN02482 112 IIGHA------DDEVLAALAETMKKG----T-SFGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEACMGVLRL 174 (474)
T ss_pred ccCCC------CHHHHHHHHHHHhhC----C-CCCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHHHHHHHH
Confidence 11222 689999999999873 2 2221 12444556666665432 257999999999999999998
Q ss_pred hccCCC-CeEEEcCCcCcchHHHHHHh-C--CeEEEEecCC------C-C----CCCCCHHHHHHHHHHHHhcCCCeeEE
Q 009517 210 LIRSEN-DGILCPIPQYPLYSASIALH-G--GTLVPYYLDE------A-T----GWGLETSEVKKQLEAAKAKGITVRAL 274 (533)
Q Consensus 210 l~~~~g-d~Vlv~~p~~~~~~~~~~~~-g--~~~~~v~~~~------~-~----~~~ld~~~l~~~i~~~~~~g~~~~~i 274 (533)
.+...| ++|+....+|+++...+... + ......+... . . .| -|++.+++.+..+ +.++.+|
T Consensus 175 AR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~---~~~iAav 250 (474)
T PLN02482 175 ARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEAN---KGEIAAV 250 (474)
T ss_pred HHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhC---CCceEEE
Confidence 864345 67899999999976432111 1 0000000000 0 0 01 1788999888652 2367778
Q ss_pred EEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCC
Q 009517 275 VVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (533)
Q Consensus 275 il~~p~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 353 (533)
|+.....-.|.+. +++.|++|.++|++||+++|+||++.+| ..+. ... .+..++.|| +.+|+|.++
T Consensus 251 I~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~--~ga-----~~~~gv~PD-----i~t~gK~lg 317 (474)
T PLN02482 251 ILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY--GGA-----QEYFGITPD-----LTTLGKVIG 317 (474)
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc--chH-----hHHhCCCCC-----EEEecchhh
Confidence 7776666678655 5788999999999999999999999997 4332 111 122223677 568999994
Q ss_pred CCCCCeeEEEEEecCCHHHHHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 009517 354 GECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTL 429 (533)
Q Consensus 354 gl~G~riG~v~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 429 (533)
.|+++|.+++ ++++++.+... ...|++.++++++++.+.|+. .++ +...+++.++.++|
T Consensus 318 --gG~Pigav~g---~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~-----------l~~-~~~~~~~~~~g~~l 380 (474)
T PLN02482 318 --GGLPVGAYGG---RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-----------LQQ-PGTYEYLDKITKKL 380 (474)
T ss_pred --CCCceEEEEE---cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHH-----------Hhc-cCHHHHHHHHHHHH
Confidence 5899999987 99999888532 235778899999998888742 111 24556666677777
Q ss_pred HHHHhcC---CCceEe-cCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEE
Q 009517 430 EDAFNSL---EGITCN-KAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCT 505 (533)
Q Consensus 430 ~~~L~~~---~g~~~~-~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis 505 (533)
++.|+++ -++.++ ..-++++.+.-...+.....+....+......++.. +.++||++.|.. +. .+ -++
T Consensus 381 ~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~-l~~~Gv~~~~~~-~~--~~----~ps 452 (474)
T PLN02482 381 IQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRG-MLEEGVYLAPSQ-FE--AG----FTS 452 (474)
T ss_pred HHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHH-HHHCCeEEeccC-CC--CC----cCC
Confidence 7777664 133333 233444432111111100000000000011234444 456899998731 11 11 256
Q ss_pred ecCCcCcHHHHHHHHHHHHHH
Q 009517 506 ILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 506 ~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+.+++++|+++++++++++++
T Consensus 453 l~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 453 LAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 679999999999999999875
No 203
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=1.2e-22 Score=210.05 Aligned_cols=320 Identities=15% Similarity=0.135 Sum_probs=215.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccC------CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc---
Q 009517 141 SADSIERAWQILDQIPGRATGAYS------HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI--- 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~------~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--- 211 (533)
|+.+++++.+.+..... ...... ....+.++|+.++++++ .++++|++|+|+++++..++..+.
T Consensus 16 ~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~~~g~t~a~~~~l~~l~~~~ 88 (402)
T TIGR02006 16 DPRVAEKMMPYLTEKFG-NPASRSHSFGWEAEEAVENARNQVAELIG------ADSREIVFTSGATESNNLAIKGIAHFY 88 (402)
T ss_pred CHHHHHHHHHHHHhcCC-CCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHHHHHHHHHHHHHHhh
Confidence 78899988877753221 111111 11235667777887764 567899999999999999887653
Q ss_pred cCCCCeEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 212 RSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
..+||+|+++.+.|+.+...+ +..|.+++.+++++ ++.+|++.+++++++ ++++|++++++||||.+.+
T Consensus 89 ~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~ 160 (402)
T TIGR02006 89 KSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQD 160 (402)
T ss_pred cCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECCCcCceeccc
Confidence 157899999999998766554 34599999998874 457899999999876 7899999999999999998
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|.++|+++|+++++|++++. |..+ .++ .++ ..| +++.|.+|.+ |++| +|++++
T Consensus 161 ---~~~I~~l~~~~g~~livD~a~a~----g~~~-~~~----~~~---~~D---~~~~s~~K~~-gp~G--~G~l~~--- 216 (402)
T TIGR02006 161 ---IAAIGEICRERKVFFHVDAAQSV----GKIP-INV----NEL---KVD---LMSISGHKIY-GPKG--IGALYV--- 216 (402)
T ss_pred ---HHHHHHHHHHcCCEEEEEcchhc----CCcc-cCc----ccc---CCC---EEEEehhhhc-CCCc--eEEEEE---
Confidence 88999999999999999999974 2211 111 111 234 6677888976 6556 677776
Q ss_pred CHHHHHHHHHhh-------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 369 SAEVREQIYKVA-------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 369 ~~~~~~~l~~~~-------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.++....+.... . ...+++.....++..+++ ...+.++.+.+++++.++.+++.|++++++.
T Consensus 217 ~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~ 286 (402)
T TIGR02006 217 RRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFR----------IAKEEMAQDTAHVLALRDRLLNGIKSIEEVY 286 (402)
T ss_pred ccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 433222222111 1 113345555555555553 1223456677888999999999999888876
Q ss_pred EecCC------ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC----------------CC
Q 009517 441 CNKAE------GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV----------------PG 498 (533)
Q Consensus 441 ~~~~~------gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~----------------~g 498 (533)
+..+. ...+.|..+ +...+. ..+ ++|.+..|..+... ..
T Consensus 287 ~~~~~~~~~p~~~~v~f~~~----------------~~~~~~-~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~ 347 (402)
T TIGR02006 287 LNGDLEHRVPGNLNVSFNYV----------------EGESLI-MAL--KDLAVSSGSACTSASLEPSYVLRALGINDELA 347 (402)
T ss_pred EeCCccccCCCeEEEEEeCc----------------CHHHHH-Hhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhc
Confidence 65321 112222111 112222 223 58888888766421 01
Q ss_pred CceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 499 ~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.+.||+|+. .|++||+++++.|+++++.+.
T Consensus 348 ~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 348 HSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred CceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 258999996 889999999999999887763
No 204
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=5.5e-22 Score=202.00 Aligned_cols=324 Identities=17% Similarity=0.183 Sum_probs=232.6
Q ss_pred CHHHHHHHHHHHhcCCCC-CccccCCCc----ccHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHhc--c
Q 009517 141 SADSIERAWQILDQIPGR-ATGAYSHSQ----GIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLI--R 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~-~~~~Y~~~~----G~~~lr~aia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~--~ 212 (533)
|..|++++.+.+.....+ +...|.... -+.+.|++++++++ .+ .++|++|.|+|+++..+...+. .
T Consensus 35 p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIvft~~tT~aln~va~~l~~~~ 108 (405)
T COG0520 35 PQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIVFTRGTTEALNLVARGLGRSL 108 (405)
T ss_pred CHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCChhHHHHHHHHHhhhhh
Confidence 889999998877543321 122333222 35678888888886 55 4899999999999999999983 2
Q ss_pred CCCCeEEEcCCcCcch----HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 213 SENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
.+||+|++..-.|+.. ....+..|++++.+|+++ +..++.+.++..+++ +||+|.+++.+|.||++.+
T Consensus 109 ~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~--~g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~p 180 (405)
T COG0520 109 KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD--DGLLDLDALEKLITP------KTKLVALSHVSNVTGTVNP 180 (405)
T ss_pred cCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC--CCCcCHHHHHHhcCC------CceEEEEECccccccccch
Confidence 6899999999888763 445555699999999984 447899999998877 8999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|+++|+++|+++++|.+++- +.. ..++ +++ +-| +++.|-.|++.|+.| +|.+.+
T Consensus 181 ---v~~I~~la~~~ga~v~VDaaq~~----~h~-~idv----~~l---~~D---f~afsgHKwl~gP~G--iGvLy~--- 237 (405)
T COG0520 181 ---VKEIAELAHEHGALVLVDAAQAA----GHL-PIDV----QEL---GCD---FLAFSGHKWLLGPTG--IGVLYV--- 237 (405)
T ss_pred ---HHHHHHHHHHcCCEEEEECcccc----Ccc-CCCc----hhc---CCC---EEEEcccccccCCCc--eEEEEE---
Confidence 99999999999999999999875 221 1222 222 344 778899996657556 577776
Q ss_pred CHHHHHHHHHhhh-----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 009517 369 SAEVREQIYKVAS-----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (533)
Q Consensus 369 ~~~~~~~l~~~~~-----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (533)
.+++++.+.+... ....++..+...+.++++ ...+ .-++.+.++.++.
T Consensus 238 r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~-------~~~~--ig~~~i~~~e~~L 308 (405)
T COG0520 238 RKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALD-------YLLE--IGMEAIEAHEREL 308 (405)
T ss_pred chHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHH-------HHHH--HhHHHHHHHHHHH
Confidence 8899888743210 112344444455455553 1111 1146777888888
Q ss_pred HHHHHHHHhcCCCceEecC----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----
Q 009517 426 AKTLEDAFNSLEGITCNKA----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP---- 497 (533)
Q Consensus 426 ~~~l~~~L~~~~g~~~~~~----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~---- 497 (533)
.+++.+.|+++|+++++.+ .++++.|. ++. .. ..+ +...|.++||.++-|..+..+-
T Consensus 309 ~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~-v~~------------~~-~~d-v~~~L~~~gI~vr~g~~ca~p~~~~~ 373 (405)
T COG0520 309 TEYLLEGLSELPGVEIYGPPDADRGGIVSFN-VKG------------IH-PHD-VATLLDEKGIAVRAGHHCAQPLHRLL 373 (405)
T ss_pred HHHHHHHHhcCCCeEEecCCcccCceEEEEE-eCC------------CC-HHH-HHHHHHhCCeEEEeccccccHHHHhc
Confidence 9999999999999998875 36666552 321 11 222 3366778899999998775210
Q ss_pred -CCceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 498 -GTWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 498 -g~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
-...+|+|+. +|+|||+++++.|+++.+
T Consensus 374 ~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 374 GVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 0124999997 899999999999988764
No 205
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.92 E-value=8.3e-23 Score=212.16 Aligned_cols=362 Identities=14% Similarity=0.124 Sum_probs=231.8
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 27 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~~ 74 (423)
T PRK05964 27 PIVRAEGAYLYLADGRE------LIDAISSWWVA----------------------THGHN----HPYIDQAIREQLDRL 74 (423)
T ss_pred eEEeccccEEEeCCCCE------EEEcchhHHhc----------------------cCCCC----CHHHHHHHHHHHhhC
Confidence 56677777777778777 88886664332 11222 689999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
.......|. .+.+..+|+.+.+... ...++++++++|++|++.+++..+.. +| .+|+....+|++.
T Consensus 75 ~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~ 147 (423)
T PRK05964 75 DHVIFAGFT-----HEPAERLAQRLVALTP--GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGD 147 (423)
T ss_pred CCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCc
Confidence 210011122 2344556666654432 12468999999999999999987521 33 6799999999987
Q ss_pred HHHHHHhCCe-------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC-CCCCCccCC-CHHHHH
Q 009517 229 SASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQVL-AEENQR 293 (533)
Q Consensus 229 ~~~~~~~g~~-------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~-p~NPtG~~~-s~~~l~ 293 (533)
...+...... +..++....+....+++.+++.+... +.++.+|+++. .++.+|..+ +++.++
T Consensus 148 t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~ 224 (423)
T PRK05964 148 TIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLA 224 (423)
T ss_pred cHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHH
Confidence 6544432211 11222211000011267778877642 23677888776 578888755 889999
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|.++|++||+++|+||+++++.+.|. .... +..+..+| +.+++|+++| .++++|++++ +++++
T Consensus 225 ~l~~lc~~~g~llI~DEv~tg~gr~G~--~~a~-----~~~~v~pD-----i~~~~K~l~g-G~~p~~av~~---~~~i~ 288 (423)
T PRK05964 225 ELRRICDRHGVLLIFDEIATGFGRTGT--LFAC-----EQAGVSPD-----IMCLSKGLTG-GYLPLAATLC---TAEIF 288 (423)
T ss_pred HHHHHHHHcCCEEEEechhhCCCcCcc--hhHH-----HhcCCCCC-----eeeeehhhhc-CcccceEEEE---cHHHH
Confidence 999999999999999999999766552 1111 11122566 4578999943 2389999988 99999
Q ss_pred HHHHHh-------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEec
Q 009517 374 EQIYKV-------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNK 443 (533)
Q Consensus 374 ~~l~~~-------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~ 443 (533)
+.+... ...+++.++++++++.+.|+. .+ .+.+.++..++.+++++.|+++ +.+.-++
T Consensus 289 ~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~-----------l~-~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vr 356 (423)
T PRK05964 289 EAFYSDDRAKAFMHSPSYTANPLACAAANASLDL-----------FE-DEPVLERVAALSAGLAEGLEPFRDLPGVADVR 356 (423)
T ss_pred HhhhcCCcccccccCCCCCcCHHHHHHHHHHHHH-----------HH-hcCHHHHHHHHHHHHHHHHHhhccCCCeEEee
Confidence 887531 235677899999988888741 11 1234556666666777777654 4444455
Q ss_pred CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 444 AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 444 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
..|.+..+ .+..+.. . .....+ ...|.++||++.+. + +.+||++. +++++|++++++++
T Consensus 357 g~Gl~~~i-~l~~~~~--~-------~~~~~l-~~~l~~~Gv~v~~~---~-----~~lR~~p~l~~t~edId~~v~~l~ 417 (423)
T PRK05964 357 VLGAIGAV-ELDRPVL--E-------RDGPAL-RAFALERGVLLRPL---G-----NTIYLMPPYIITAEELDRITDAIV 417 (423)
T ss_pred cccEEEEE-EeccCcc--h-------hHHHHH-HHHHHHCCeEEEec---C-----CEEEEeCCcccCHHHHHHHHHHHH
Confidence 66665432 2321110 0 002233 34456789999862 1 27999986 89999999999999
Q ss_pred HHHHH
Q 009517 522 DFHKN 526 (533)
Q Consensus 522 ~~l~~ 526 (533)
+++++
T Consensus 418 ~al~~ 422 (423)
T PRK05964 418 EVADE 422 (423)
T ss_pred HHHhh
Confidence 99876
No 206
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.92 E-value=2.4e-22 Score=205.85 Aligned_cols=291 Identities=12% Similarity=0.116 Sum_probs=197.1
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g 236 (533)
..|+.+. ..+|++.+|++.+ .+..+++++|+.|+..++..++ ++||+|+++.|.|......+.. .|
T Consensus 56 ~r~~~pt-~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~-~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 56 SRLGNPT-VKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFL-KAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred cCCCCcc-hHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 3444444 7899999999975 2345555666789999998887 8999999999988876554433 35
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
.++..++ ..|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....
T Consensus 126 i~~~~~~-------~~d~~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~ 189 (386)
T PRK06767 126 ITHSFCD-------METEADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPY 189 (386)
T ss_pred eEEEEeC-------CCCHHHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 5444443 2378999999876 7999999999999999998 8899999999999999999996433
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHHHHHHh-hh-ccccCChHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKV-AS-VNLCSNISGQIL 393 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~~l~~~-~~-~~~~~~~~~q~a 393 (533)
+. .+ + . . ..| +++.|+||.+ +.+|.|+ ||+++ +++.+..+.+. .. .....+++.+++
T Consensus 190 ~~--~p---l-~----~---g~D---iv~~S~sK~l-~g~g~~~gG~v~~---~~~~i~~~~~~~~~~~g~~~~~~~a~l 249 (386)
T PRK06767 190 LQ--RP---L-E----L---GCD---AVVHSATKYI-GGHGDVVAGVTIC---KTRALAEKIRPMRKDIGGIMAPFDAWL 249 (386)
T ss_pred cC--Cc---h-h----c---CCc---EEEecCccee-cCCCCceeEEEEe---ChHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 21 11 1 1 1 123 7788999999 5578885 88887 78877665433 22 323345665555
Q ss_pred HHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec------------CCceeEEecccCCCHHHH
Q 009517 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK------------AEGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~------------~~gg~~~~~~~~~~~~~~ 461 (533)
+...|+ .+..+.++.+++.+.+.+.|+++|++..+. ..||++.|- ++...
T Consensus 250 ~~~~L~--------------tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~-l~~~~--- 311 (386)
T PRK06767 250 LLRGLK--------------TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFS-IKGGK--- 311 (386)
T ss_pred HHcCCC--------------cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEE-EcCCH---
Confidence 544443 234455677888899999999998877432 245665552 32111
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC------------------CC--CCceEEEEecCCcCcHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ------------------VP--GTWHFRCTILPQEDKIPAIVTRLT 521 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~------------------~~--g~~~iRis~~~~~e~i~~~~~~l~ 521 (533)
.+...|+ ..|+..++.+.-|..... .. ..+.||||+++ |+.+.+++-|.
T Consensus 312 --------~~~~~f~-~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~ 380 (386)
T PRK06767 312 --------EETQAFI-NDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL--ESWEDIVSDLE 380 (386)
T ss_pred --------HHHHHHH-HhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHH
Confidence 0123333 445666766666643310 00 13489999996 45788888888
Q ss_pred HHHHH
Q 009517 522 DFHKN 526 (533)
Q Consensus 522 ~~l~~ 526 (533)
+++..
T Consensus 381 ~al~~ 385 (386)
T PRK06767 381 QALKK 385 (386)
T ss_pred HHHhh
Confidence 88763
No 207
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=3.7e-22 Score=207.95 Aligned_cols=339 Identities=12% Similarity=0.054 Sum_probs=211.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vl 219 (533)
++++++++.+++.+........| . .+....+++.+.+..+ -..+.++++++|++|++.+++..+...| .+|+
T Consensus 61 ~p~v~~a~~~q~~~~~~~~~~~~-~----~~~~~~la~~L~~~~~--~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii 133 (433)
T PRK08117 61 HPKVVQAIKEQADKLMHGPSGVI-Y----YESILKLAEELAEITP--GGLDCFFFSNSGAEAIEGALKLAKHVTKRPYII 133 (433)
T ss_pred CHHHHHHHHHHHHhccCcccccc-C----CHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEE
Confidence 68999999999876321000111 1 2333444444444321 2246899999999999999998652234 6799
Q ss_pred EcCCcCcchHHHHHHh-CC-------------eEEEEecCCCC--CCC--------CCHHHHHHHHHHHHhcCCCeeEEE
Q 009517 220 CPIPQYPLYSASIALH-GG-------------TLVPYYLDEAT--GWG--------LETSEVKKQLEAAKAKGITVRALV 275 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~-g~-------------~~~~v~~~~~~--~~~--------ld~~~l~~~i~~~~~~g~~~~~ii 275 (533)
....+|++........ +. .+..+|..... .++ -|++.+++.++.... +.++.+||
T Consensus 134 ~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~aavi 212 (433)
T PRK08117 134 SFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEEVAAVI 212 (433)
T ss_pred EECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC-CCcEEEEE
Confidence 9999999866443222 10 01222221100 001 145666666653111 22677888
Q ss_pred EeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCC
Q 009517 276 VINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYG 354 (533)
Q Consensus 276 l~~p~NPtG~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~g 354 (533)
++......|.+ ++++++++|.++|++||+++|+||+|++|.++|. .... +..+..+| +.+|||++ |
T Consensus 213 ~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~--~~~~-----~~~gv~pD-----i~t~sK~l-g 279 (433)
T PRK08117 213 IEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE--WFAA-----QTFGVVPD-----IMTIAKGI-A 279 (433)
T ss_pred ECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc--chhH-----hhcCCCCC-----Eeehhhhc-c
Confidence 77767667774 5788899999999999999999999999766553 1111 11112466 57999999 5
Q ss_pred CCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 355 ECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 355 l~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 433 (533)
.|+|+|++++ ++++++.+..... .+++.++++++++.+.|+.. + .+.+.++++++.+++++.|
T Consensus 280 -~G~pigav~~---~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l-----------~-~~~l~~~~~~~g~~l~~~L 343 (433)
T PRK08117 280 -SGLPLSAVVA---SKELMEQWPLGSHGTTFGGNPVACAAALATLEVI-----------K-EEKLLDNANEMGAYALERL 343 (433)
T ss_pred -CCCcceeEEE---cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHH-----------H-hccHHHHHHHHHHHHHHHH
Confidence 6999999998 8999887754333 66788999999999888521 1 1234455555566666666
Q ss_pred hcC----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--c
Q 009517 434 NSL----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--L 507 (533)
Q Consensus 434 ~~~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~ 507 (533)
+++ +.+.-++..|.+ +.+.+..+.+. ........+.+.+.++||.+.+. + ...+++||++ .
T Consensus 344 ~~l~~~~~~~~~vrg~Gl~-~gi~~~~~~~~-------~~~~~~~~~~~~l~~~Gv~~~~~---g--~~~~~lRl~p~~~ 410 (433)
T PRK08117 344 EVLKEKHPVIGDVRGIGLM-IGIEIVDPDGE-------PDGDAVEKILDKCLEKGLLFYLC---G--NAGNVLRMIPPLT 410 (433)
T ss_pred HHHHhcCCceeeeecCCcE-EEEEEecCCCC-------cchHHHHHHHHHHHHCCCEEeec---C--CCCCEEEEeCCcc
Confidence 553 223334455543 44334321100 00011222335566789998763 1 1124899996 4
Q ss_pred CCcCcHHHHHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+++++|++++++|.++++++.+
T Consensus 411 ~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 411 VTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999987754
No 208
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=2.9e-22 Score=205.31 Aligned_cols=213 Identities=12% Similarity=0.126 Sum_probs=161.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~g~~~~~v~~ 244 (533)
..+|++.+|++.+ .+..++++++++|+..++..++ .+||+|+++.|+|.+... .+...|+++..++
T Consensus 66 ~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all-~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd- 135 (398)
T PRK08249 66 VQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFL-KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE- 135 (398)
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC-
Confidence 6889999999875 3457778888999999999888 799999999999987543 3455788877664
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
..|++.++++|++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+... .+
T Consensus 136 ------~~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~--~~-- 196 (398)
T PRK08249 136 ------TGDHEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ--NP-- 196 (398)
T ss_pred ------CCCHHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC--Cc--
Confidence 3589999999976 7999999999999999998 888999999999999999999864431 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~ 402 (533)
. . . ..| +++.|+||.+ |.+|.++ ||+++ ++++++.+..... ...+.++..++++...|+
T Consensus 197 -l-~----~---~~D---ivv~S~sK~l-~g~~~~~gG~vv~---~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~--- 257 (398)
T PRK08249 197 -L-A----L---GAD---LVIHSATKFL-SGHADALGGVVCG---SKELMEQVYHYREINGATMDPMSAYLILRGMK--- 257 (398)
T ss_pred -h-h----h---CCC---EEeccCceec-CCCCCceEEEEEC---CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc---
Confidence 1 1 1 234 6789999998 4466666 55554 8889888877665 445666777666655543
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+....++..++++.+.+.|++.|.+.
T Consensus 258 -----------tL~~R~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 258 -----------TLKLRVRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 234444566777888888898865543
No 209
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=5.3e-22 Score=203.67 Aligned_cols=221 Identities=15% Similarity=0.216 Sum_probs=163.4
Q ss_pred ccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc----hHHHHHHhCC
Q 009517 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGG 237 (533)
Q Consensus 162 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~----~~~~~~~~g~ 237 (533)
.|+.+. ..+|++.+|++.+ . .+. +++++|++++..++..++ ++||+|+++.|+|.. +...+...|.
T Consensus 56 R~~~p~-~~~Le~~lA~l~g------~-~~~-v~~~sG~~Ai~~~l~all-~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~ 125 (405)
T PRK08776 56 RSGNPT-RDLLGEALAELEG------G-AGG-VITATGMGAINLVLNALL-QPGDTLVVPHDAYGGSWRLFNALAKKGHF 125 (405)
T ss_pred CCCChH-HHHHHHHHHHHhC------C-Cce-EEEcCHHHHHHHHHHHHh-CCCCEEEEccCCchHHHHHHHHHHHhcCc
Confidence 344433 5678888888753 1 234 455556899999999998 899999999999987 3444555687
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 009517 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 238 ~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~ 317 (533)
+++.++. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 126 ~v~~v~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~ 189 (405)
T PRK08776 126 ALITADL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL 189 (405)
T ss_pred EEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc
Confidence 8877764 378999998876 7999999999999999976 89999999999999999999975211
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHH
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASL 396 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~ 396 (533)
..++ . + ..| +++.|.+|.++|..+...|++++ .++++.+.+..... ...+.+++.+.++..
T Consensus 190 -----~~pl-~----~---gaD---ivv~S~tK~l~g~~~~~~G~vv~--~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~ 251 (405)
T PRK08776 190 -----QKPL-E----F---GAD---LVLHSTTKYINGHSDVVGGAVVA--RDAELHQQLVWWANALGLTGSPFDAFLTLR 251 (405)
T ss_pred -----CCcc-c----c---cCC---EEEecCceeecCCCCceEEEEEe--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 1111 1 1 234 78999999996544688999876 36778777765544 445678888877765
Q ss_pred HcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 397 VMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 397 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+ ++++...++..++...+.+.|++.|.+.
T Consensus 252 gl--------------~tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 252 GL--------------RTLDARLRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred hh--------------CcHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 55 3345566777888888999998876543
No 210
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=6.5e-22 Score=201.27 Aligned_cols=222 Identities=13% Similarity=0.119 Sum_probs=167.2
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHh
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALH 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~ 235 (533)
...|+.+. ...|++++|++.+ .+++++++|+++|+..++..++ ++||+|+++.|+|......+ ...
T Consensus 47 Y~R~~npt-~~~Le~~lA~leg--------~e~ivvt~gg~~Ai~~~l~all-~~Gd~Il~~~~~y~~~~~~~~~~~~~~ 116 (388)
T PRK08861 47 YTRSGNPN-RGLLEQTLSELES--------GKGAVVTNCGTSALNLWVSALL-GPDDLIVAPHDCYGGTYRLFNTRANKG 116 (388)
T ss_pred ccCCCCch-HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCchHHHHHHHHHHHhcC
Confidence 34455544 7889999999964 5799999999999999999998 89999999999998643332 234
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|.++..++ ..|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...
T Consensus 117 gi~v~~vd-------~~d~e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~ 180 (388)
T PRK08861 117 DFKVQFVD-------QSDAAALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTP 180 (388)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 66776664 2488999998876 7999999999999999999 788999999999999999999764
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~ 394 (533)
.+. .+. . + ..| +++.|++|.++|..+...|++++ .++++.+.++.... .+...+++....+
T Consensus 181 ~~~--~pl----~----~---GaD---ivv~S~tK~l~G~~d~~gG~i~~--~~~~~~~~~~~~~~~~G~~~~p~~a~l~ 242 (388)
T PRK08861 181 VLQ--KPL----E----L---GAD---FVIHSTTKYINGHSDVIGGVLIT--KTKEHAEELAWWGNCIGATGTPFDSYMT 242 (388)
T ss_pred ccC--CCc----c----c---CCC---EEEeecceeccCCCcceeEEEEe--cHHHHHHHHHHHHhccCCCCChHHHHHH
Confidence 332 111 1 1 234 78999999996655688999876 25667777765554 4566678777776
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
..-|+. +..+.++..++...+.+.|++.|.+
T Consensus 243 ~rgl~T--------------l~lR~~~~~~~a~~~a~~L~~~p~v 273 (388)
T PRK08861 243 LRGIRT--------------LGARMRVHEESAQQILAYLQTQSLV 273 (388)
T ss_pred HhcCCC--------------HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 666642 3444455667777888888877554
No 211
>PRK07505 hypothetical protein; Provisional
Probab=99.91 E-value=1.1e-22 Score=210.38 Aligned_cols=322 Identities=15% Similarity=0.106 Sum_probs=190.2
Q ss_pred CHHHHHHHHHHHhcCC--CCCc--cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc---C
Q 009517 141 SADSIERAWQILDQIP--GRAT--GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---S 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~--~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~ 213 (533)
++++++++.+++.+.. .... ..+ ......+|++++++++ + . +.++++++++|...+++.+.. .
T Consensus 62 ~p~v~~A~~~~l~~~g~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~---~~~~~~sG~~a~~~ai~~~~~~~~~ 131 (402)
T PRK07505 62 HPAIIEGAVDALKRTGSLHLSSSRTRV-RSQILKDLEEALSELF----G--A---SVLTFTSCSAAHLGILPLLASGHLT 131 (402)
T ss_pred CHHHHHHHHHHHHHhCCCCCCccchhh-hhHHHHHHHHHHHHHh----C--C---CEEEECChHHHHHHHHHHHHhcccC
Confidence 6899999999987632 1000 011 1222455666666554 3 2 455555666888888876431 1
Q ss_pred CC-CeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 214 EN-DGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 214 ~g-d~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
+| ..|++.+..|++-.. .....+.+++.+|. .|++++++++++ +++++++++|+||||.+.+
T Consensus 132 ~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~------~~~~~vl~~p~~~~G~~~~- 197 (402)
T PRK07505 132 GGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT------NKTVAYVADGVYSMGGIAP- 197 (402)
T ss_pred CCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc------CCCEEEEEecccccCCcCC-
Confidence 23 347777767665321 11223456666664 378999998865 5789999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+++|.++|+++++++|+||+|....|+........ ..++...++ .+|++.||||++ |++| ||+++ .+
T Consensus 198 --~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~----~~~~~~~~d-~~i~~~s~sK~~-~~~G---g~~~~--~~ 264 (402)
T PRK07505 198 --VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVR----SELDYRLNE-RTIIAASLGKAF-GASG---GVIML--GD 264 (402)
T ss_pred --HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHH----HHcCCCCCC-CeEEEEechhhh-hccC---eEEEe--CC
Confidence 78888999999999999999864334321111111 111100123 578899999998 6565 78764 27
Q ss_pred HHHHHHHHHhhh-ccc--cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Q 009517 370 AEVREQIYKVAS-VNL--CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEG 446 (533)
Q Consensus 370 ~~~~~~l~~~~~-~~~--~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g 446 (533)
+++++.+..... .++ ++++++++++.+.++.. ..+++.++.+.++++.+.+...+... ....+
T Consensus 265 ~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~ 330 (402)
T PRK07505 265 AEQIELILRYAGPLAFSQSLNVAALGAILASAEIH---------LSEELDQLQQKLQNNIALFDSLIPTE-----QSGSF 330 (402)
T ss_pred HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH---------hccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCC
Confidence 788888876543 333 34456777766665310 00112223344444444333322111 12222
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
.+..++.+..+. ....+... |.++||.+.++..+....+.++|||++. ++++++++++++|++++
T Consensus 331 ~~i~~~~~~~~~------------~~~~~~~~-l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 331 LPIRLIYIGDED------------TAIKAAKQ-LLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred CCEEEEEeCCHH------------HHHHHHHH-HHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 222222111100 12334444 4578999999744432334458999997 79999999999999987
Q ss_pred HH
Q 009517 525 KN 526 (533)
Q Consensus 525 ~~ 526 (533)
++
T Consensus 398 ~~ 399 (402)
T PRK07505 398 DE 399 (402)
T ss_pred Hh
Confidence 65
No 212
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=1.5e-21 Score=203.03 Aligned_cols=331 Identities=15% Similarity=0.088 Sum_probs=205.8
Q ss_pred CHHHHHHHHHHHhcCCC--CCccccC-CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG--RATGAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~--~~~~~Y~-~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+++++...+..... .....|. ...-...+.+...+.+.+.+| .+..+|++++| ++++..++..++ ++||+
T Consensus 38 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~sg-t~al~~~l~~l~-~~gd~ 113 (416)
T PRK00011 38 SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHSG-SQANAAVYFALL-KPGDT 113 (416)
T ss_pred CHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCCc-hHHHHHHHHHhc-CCCCE
Confidence 78888888666532211 0011111 111122232322334444455 34456766654 679999999998 89999
Q ss_pred EEEcCCcCcchHH-----HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 218 ILCPIPQYPLYSA-----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 218 Vlv~~p~~~~~~~-----~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
|+++.|+|..+.. .+...|++++.++++.+ ++.+|++++++++++. ++++|++++++|| ...+ +
T Consensus 114 Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~-----~~k~v~~~~~~~~--~~~~---~ 182 (416)
T PRK00011 114 ILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEE-TGLIDYDEVEKLALEH-----KPKLIIAGASAYS--RPID---F 182 (416)
T ss_pred EEEeccccCCccccccccccccceeeEeecCcCcc-cCCcCHHHHHHHHHhc-----CCCEEEECCCcCC--CccC---H
Confidence 9999999986532 12334678888887643 5789999999999753 6888888766654 4444 8
Q ss_pred HHHHHHHHHcCCEEEEccccc-cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
++|.++|+++|+++|+|++|. ++.+.+..+ .. + . . ..+++.||||++ +|.|+||+++ .+++
T Consensus 183 ~~I~~la~~~~~~livD~a~~~g~~~~g~~~-~~-------~---~-~-~di~~~S~~K~l---~g~~gg~i~~--~~~~ 244 (416)
T PRK00011 183 KRFREIADEVGAYLMVDMAHIAGLVAAGVHP-SP-------V---P-H-ADVVTTTTHKTL---RGPRGGLILT--NDEE 244 (416)
T ss_pred HHHHHHHHHcCCEEEEECcchhcccccCccC-CC-------C---C-C-CcEEEecCCcCC---CCCCceEEEe--CCHH
Confidence 999999999999999999974 333322111 11 1 1 1 126799999977 4899999998 2368
Q ss_pred HHHHHHHhhhc-cccCC-hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCcee
Q 009517 372 VREQIYKVASV-NLCSN-ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-AEGAM 448 (533)
Q Consensus 372 ~~~~l~~~~~~-~~~~~-~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg~ 448 (533)
+++.+...... ..+.+ ...+.++..++. ....+.++++.++++++++++++.|+++ |+++.. +..+.
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~---------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 314 (416)
T PRK00011 245 LAKKINSAVFPGIQGGPLMHVIAAKAVAFK---------EALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNH 314 (416)
T ss_pred HHHHHHHHhCccccCCccHHHHHHHHHHHH---------HHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCe
Confidence 88888765532 22222 222222222221 0111234667788899999999999997 887654 12236
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCC-CC--CCCCCCceEEEEe------cCCcCcHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGS-GF--GQVPGTWHFRCTI------LPQEDKIPAIVTR 519 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~-~f--~~~~g~~~iRis~------~~~~e~i~~~~~~ 519 (533)
++|+.++.. ++ +... +.+.|+++||.+..+. .+ ........+|++. +.++++++++++.
T Consensus 315 ~~~i~~~~~----------~~-~~~~-~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~ 382 (416)
T PRK00011 315 LVLVDLRSK----------GL-TGKE-AEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAEL 382 (416)
T ss_pred EEEEeCccc----------CC-CHHH-HHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHH
Confidence 777655311 01 1223 3456778999997432 12 1111223689965 3568899999999
Q ss_pred HHHHHHH
Q 009517 520 LTDFHKN 526 (533)
Q Consensus 520 l~~~l~~ 526 (533)
|++++..
T Consensus 383 l~~~~~~ 389 (416)
T PRK00011 383 IADVLDN 389 (416)
T ss_pred HHHHHhc
Confidence 9988664
No 213
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.91 E-value=1.3e-21 Score=200.76 Aligned_cols=317 Identities=12% Similarity=0.111 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-----CCCC
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SEND 216 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~~gd 216 (533)
+.+.+++...+....+ ....|+ |..++.+.+.+.+.+.+| ++.+++++++|+++++..++.++.. .+||
T Consensus 34 ~~~~~a~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~ 107 (373)
T TIGR03812 34 PIAVKAYDMFIETNLG-DPGLFP---GTKKIEEEVVGSLGNLLH--LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTP 107 (373)
T ss_pred HHHHHHHHHHhhcCCC-CcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCc
Confidence 4445666555443222 122232 233333444444444444 5567889999999999888776541 3678
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+|++++++|..+...++..|++++.++.+. ++.+|++++++++++ ++.++++++|+||||.+.+ +++|.
T Consensus 108 ~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~ 176 (373)
T TIGR03812 108 NIIVPESAHFSFEKAAEMLGLELRYAPLDE--DYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELS 176 (373)
T ss_pred EEEECCcchHHHHHHHHHcCCeEEEEeeCC--CCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHH
Confidence 999999999999999999999999999864 568999999999977 5655666668999999987 88999
Q ss_pred HHHHHcCCEEEEccccccccccC-----CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVP-----EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
++|+++|+++|+|++|.++...- ......+. ..... .+..|.+| + ++++.|+|+++. .+++
T Consensus 177 ~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~---------~~~~d-~~~~s~~K-~-~~~~~~~G~~~~--~~~~ 242 (373)
T TIGR03812 177 KIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFS---------LPGVQ-SITIDPHK-M-GLSPIPAGGILF--RSKS 242 (373)
T ss_pred HHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcccc---------CCCCC-EEEECccc-c-CCCcCCceEEEE--eCHH
Confidence 99999999999999998643210 00000000 01111 33457779 5 556788987664 2777
Q ss_pred HHHHHHHhhhc-c--------ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-E
Q 009517 372 VREQIYKVASV-N--------LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT-C 441 (533)
Q Consensus 372 ~~~~l~~~~~~-~--------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~ 441 (533)
+++.+...... . ...+.....++..+|+.. ..+.++++.+++.++++++++.|+++ |+. +
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l---------~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 312 (373)
T TIGR03812 243 YLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYL---------GREGYRKIVAECMENTRYLVEELKKI-GFEPV 312 (373)
T ss_pred HHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHh---------CHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence 77766321110 0 122334444444554311 01335667788899999999999998 554 4
Q ss_pred ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHH
Q 009517 442 NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTR 519 (533)
Q Consensus 442 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~ 519 (533)
..+..++. .+.++ . ...+ .+.|.++||.+.++. +..+||+++. .+++++++++++
T Consensus 313 ~~~~~~~v-~~~~~--~-------------~~~v-~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edid~l~~~ 369 (373)
T TIGR03812 313 IEPVLNIV-AFEVD--D-------------PEEV-RKKLRDRGWYVSVTR------CPKALRIVVMPHVTREHIEEFLED 369 (373)
T ss_pred cCCCceEE-EEEeC--C-------------HHHH-HHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHH
Confidence 45554433 32222 1 1233 345567799998642 2338999996 788999999999
Q ss_pred HHH
Q 009517 520 LTD 522 (533)
Q Consensus 520 l~~ 522 (533)
|++
T Consensus 370 L~~ 372 (373)
T TIGR03812 370 LKE 372 (373)
T ss_pred Hhh
Confidence 875
No 214
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.91 E-value=6.1e-22 Score=201.31 Aligned_cols=285 Identities=15% Similarity=0.145 Sum_probs=194.8
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHh
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALH 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~ 235 (533)
...|+. ....+|++++|++. .++.++++++++|+..++..++ ++||+|+++.|+|.++...+ ...
T Consensus 45 y~ry~~-p~~~~Le~~lA~l~---------~~~~v~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~~~~~~~~~l~~~ 113 (366)
T PRK07582 45 YGRASN-PTWRALEAALGELE---------GAEALVFPSGMAAITAVLRALL-RPGDTVVVPADGYYQVRALAREYLAPL 113 (366)
T ss_pred eECCCC-ccHHHHHHHHHHHc---------CCCEEEECCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHHHhcC
Confidence 344554 44899999999985 2345566666789999998887 89999999999999887654 346
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|++++.++.++. .+ .+.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 114 G~~v~~v~~~~~------~~----~~~~------~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~ 174 (366)
T PRK07582 114 GVTVREAPTAGM------AE----AALA------GADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATP 174 (366)
T ss_pred eEEEEEECCCCh------HH----Hhcc------CceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCc
Confidence 899998886532 11 2222 7899999999999998876 999999999999999999999631
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~ 394 (533)
.+..+ + ++ ..| +++.|+||.+.|.+|+|+||+++ .++++++.+..... ...+++++.+..+
T Consensus 175 --~~~~p---~-----~~---g~D---ivv~S~sK~l~G~~g~~~G~v~~--~~~~l~~~l~~~~~~~g~~~~~~~a~l~ 236 (366)
T PRK07582 175 --LGQRP---L-----EL---GAD---LVVASDTKALTGHSDLLLGYVAG--RDPELMAAVERWRLLAGAIPGPFEAWLA 236 (366)
T ss_pred --cccCc---h-----hc---CCc---EEEecccccccCCCCeeEEEEEc--CcHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 12211 1 11 234 77899999997777899999986 25788888876654 4456677777777
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-------C-----------CceeEEecccCC
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-------A-----------EGAMYLFPRIQL 456 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-------~-----------~gg~~~~~~~~~ 456 (533)
...|+. +....++..++...+.+.|++.|.+..+. | .||++.|- +..
T Consensus 237 ~r~l~t--------------l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~-~~~ 301 (366)
T PRK07582 237 HRSLGT--------------LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFE-LAD 301 (366)
T ss_pred Hhcccc--------------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEE-eCC
Confidence 666642 33344566678888999998876654321 2 46666552 321
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-------------CCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-------------VPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-------------~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
...+.+.++..++.. .+..+|. .-..+.||+|++++ +.+.+++.|+++
T Consensus 302 ----------------~~~~~~~~~~l~~~~-~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE--~~~dli~dl~~a 362 (366)
T PRK07582 302 ----------------AAAAERFVAASRLVV-AATSFGGVHTSADRRARWGDAVPEGFVRLSCGIE--DTDDLVADLERA 362 (366)
T ss_pred ----------------HHHHHHHHHhCCcce-ecccCCCccchhhhHHHcCCCCCCCeEEEEeccC--CHHHHHHHHHHH
Confidence 111334555555433 2222321 01124899999963 457778888887
Q ss_pred HHH
Q 009517 524 HKN 526 (533)
Q Consensus 524 l~~ 526 (533)
++.
T Consensus 363 l~~ 365 (366)
T PRK07582 363 LDA 365 (366)
T ss_pred Hhh
Confidence 764
No 215
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.91 E-value=6e-22 Score=204.47 Aligned_cols=328 Identities=14% Similarity=0.086 Sum_probs=213.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC---CC-C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS---EN-D 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~---~g-d 216 (533)
++.+++++.+++.+... ...|... +.+..+|+.+.+... ...+.++++++|+||++.+++..+.. .| .
T Consensus 93 hp~v~~Av~~ql~~l~~--~~~~~~~----~~~~~lAe~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~ 164 (442)
T TIGR03372 93 NPNVIAAVENQLAKQPL--HSQELLD----PLRALLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKF 164 (442)
T ss_pred CHHHHHHHHHHHHhCCC--cccccCC----HHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCc
Confidence 68899999999987432 2223322 334445555544322 12367999999999999999987622 24 6
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEE----EEecCCCCC--CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-CCH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLV----PYYLDEATG--WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAE 289 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~----~v~~~~~~~--~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~s~ 289 (533)
+|+....+|++............. ..|+.+.-. --.|.+.+++.++.....+.++.+||++..+...|+. +++
T Consensus 165 ~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~ 244 (442)
T TIGR03372 165 TFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPE 244 (442)
T ss_pred EEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCH
Confidence 799999999997655444322110 111111000 0126788888886533334468888888777777874 467
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGF 368 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~ 368 (533)
+.+++|.++|++||+++|+||++++|...|. +..+ +..++.|| +.+|+|.++ .| +++|.+++
T Consensus 245 ~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~a~-----e~~gv~PD-----ivt~gK~lg--~G~~Pigavv~--- 307 (442)
T TIGR03372 245 GYLPAVRALCDEFGALLILDEVQTGMGRTGK--MFAC-----EHEGVQPD-----ILCLAKALG--GGVMPIGATIA--- 307 (442)
T ss_pred HHHHHHHHHHHHcCCEEEEeecccCCCcccc--chhh-----hhcCCCCC-----eeeehhhhc--CCcccceEEEe---
Confidence 8899999999999999999999999765553 2222 11223677 456999994 48 69999998
Q ss_pred CHHHHHHHHH---hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----C-Cce
Q 009517 369 SAEVREQIYK---VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----E-GIT 440 (533)
Q Consensus 369 ~~~~~~~l~~---~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-g~~ 440 (533)
.+++++.+.. ....|++.++++++++.+.|+ ..++ +.+.++.+++.+++++.|+++ | .+.
T Consensus 308 ~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~-----------~i~~-~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~ 375 (442)
T TIGR03372 308 TEAVFSVLFDNPFLHTTTFGGNPLACAAALATIN-----------ELLE-KNLPAQAAIKGDFLLDGFQQLAAEYPDLII 375 (442)
T ss_pred cHHHHHhhhccCccccCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 8899888732 123678889999999988884 2221 234555666667777777654 3 345
Q ss_pred EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHH
Q 009517 441 CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVT 518 (533)
Q Consensus 441 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~ 518 (533)
-++..|.|+.+ .+..+. ....++ ..|.++||++.+... +.+.+||.+. +++++++++++
T Consensus 376 ~vRG~Gl~~gi-el~~~~------------~~~~i~-~~l~~~Gvl~~~~~~-----~~~~lr~~Ppl~~t~~~id~~~~ 436 (442)
T TIGR03372 376 EARGKGLLMAI-EFRDNE------------IGYAFA-KELFQQNILVAGTLN-----NAKSIRIEPPLTITIEQCALVIK 436 (442)
T ss_pred EEecceEEEEE-EeCChH------------HHHHHH-HHHHHCCcEEeecCC-----CCCEEEEECCcccCHHHHHHHHH
Confidence 56677665543 232111 012334 445568999975311 1238999985 89999999999
Q ss_pred HHHHHH
Q 009517 519 RLTDFH 524 (533)
Q Consensus 519 ~l~~~l 524 (533)
+|++++
T Consensus 437 ~l~~~~ 442 (442)
T TIGR03372 437 AAKDAL 442 (442)
T ss_pred HHHHhC
Confidence 998763
No 216
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.91 E-value=9.3e-22 Score=202.27 Aligned_cols=213 Identities=13% Similarity=0.154 Sum_probs=159.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH----HHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~ 244 (533)
..+|+++++++.+ .+..+++++|+.|+..++..++ .+||+|+++.|+|.... ..+...|+++..++.
T Consensus 67 ~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll-~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEG--------GEAAVALASGMGAITATLWTLL-RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 7889999999875 2345677788899999999887 89999999999887533 345567988888875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+ |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... + .+
T Consensus 138 ~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~-~-~~-- 197 (403)
T PRK07503 138 T-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYL-Q-RP-- 197 (403)
T ss_pred C-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-C-Cc--
Confidence 3 68999999876 7999999999999999988 89999999999999999999986432 1 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHh--hh-ccccCChHHHHHHHHHcCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--AS-VNLCSNISGQILASLVMSP 400 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~--~~-~~~~~~~~~q~a~~~~L~~ 400 (533)
+ . + ..| |++.|+||.+ +.+| .+.||++. ++++++.++.. .. ...+.+++.++.+...|+
T Consensus 198 -l-~----~---g~D---i~v~S~tK~l-~g~gd~~gG~v~~---~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~- 260 (403)
T PRK07503 198 -L-E----L---GAD---LVVHSATKYL-GGHGDITAGLVVG---GKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK- 260 (403)
T ss_pred -h-h----h---CCC---EEEccccccc-cCCCceeEEEEEc---CHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-
Confidence 1 1 1 234 8899999999 5455 78899886 88888887643 32 345667777766655543
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 401 PKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+....++..++...+.+.|++.|.+.
T Consensus 261 -------------tl~~r~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 261 -------------TLALRMDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 233334444566777888888776554
No 217
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.91 E-value=6.9e-22 Score=202.87 Aligned_cols=221 Identities=14% Similarity=0.145 Sum_probs=158.7
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g 236 (533)
..|+.+. ..+|++++|++.+ .+..+++++|+.++..++..++ ++||+|+++.|.|..+...+ ...|
T Consensus 60 ~r~~~p~-~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 129 (398)
T PRK07504 60 SRYSNPT-VDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQV-KAGDHVVAARALFGSCRYVVETLLPRYG 129 (398)
T ss_pred ecCCCch-HHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHh-CCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence 3454444 7899999999874 2334557788889988888777 79999999999999765443 3568
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
++++.++ .+|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....
T Consensus 130 ~~v~~vd-------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~ 193 (398)
T PRK07504 130 IESTLVD-------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPL 193 (398)
T ss_pred eEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccc
Confidence 8888774 3689999999976 7999999999999999998 8899999999999999999998644
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH-HHHHhhh-ccccCChHHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-QIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~a~ 394 (533)
+. .+ + . + ..| +++.|+||.+ +.+|+++|++++ .+++++. .+..... .....+++.++++
T Consensus 194 ~~--~~---~-~----~---gaD---ivv~S~sK~l-~g~g~~~GG~vv--~~~~~i~~~~~~~~~~~g~~~s~~~A~~~ 254 (398)
T PRK07504 194 FQ--KP---L-E----L---GAH---IVVYSATKHI-DGQGRCLGGVVL--SDKAWIEEHLQDYFRHTGPSLSPFNAWTL 254 (398)
T ss_pred cC--Cc---h-h----h---CCC---EEEeeccccc-cCCccceEEEEE--eCcHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 31 11 1 1 1 234 7899999999 668999964443 1566554 3443322 3345566666655
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
...|+ .+....++..++...+.+.|++.|++.
T Consensus 255 l~~L~--------------tl~~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 255 LKGLE--------------TLPVRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred Hhccc--------------hHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 55553 234444555677778888888776643
No 218
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=1e-21 Score=204.10 Aligned_cols=367 Identities=12% Similarity=0.057 Sum_probs=238.2
Q ss_pred hHHHHHH-HHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 76 IVSIAQR-LQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 76 ~~~~~~~-~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
++.++++ ...++.||++ ++|+..|.... ..+++ ++++++++.+++.+
T Consensus 66 ~~~~~~G~~~l~D~dG~~------ylD~~~g~~~~----------------------~lGH~----~p~v~~Ai~~ql~~ 113 (459)
T PRK11522 66 VEWQAGGLNTLVDTQGQE------FIDCLGGFGIF----------------------NVGHR----NPVVVSAVQNQLAK 113 (459)
T ss_pred eEEeccCeEEEEECCCCE------EEECCcCHHhh----------------------hcCCC----CHHHHHHHHHHHhh
Confidence 5566666 6667777777 77776553221 11122 68999999999987
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC---C-CeEEEcCCcCcchHH
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE---N-DGILCPIPQYPLYSA 230 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~---g-d~Vlv~~p~~~~~~~ 230 (533)
... ...|.. .+.+..+|+.+..... ...++++++++|+||++.+++..+... | .+|+....+|++...
T Consensus 114 l~~--~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~ 185 (459)
T PRK11522 114 QPL--HSQELL----DPLRAMLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSL 185 (459)
T ss_pred Ccc--cccccC----CHHHHHHHHHHHHhCC--CCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcH
Confidence 432 222222 3344445555544322 223689999999999999999876322 2 468889999999765
Q ss_pred HHHHhCC-eEEE---EecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcC
Q 009517 231 SIALHGG-TLVP---YYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 231 ~~~~~g~-~~~~---v~~~~~~~~--~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~ 303 (533)
....... .... .|..+.-.+ -.|.+++++.++.....+.++.+||++..+.-.|. .+|++.++++.++|++||
T Consensus 186 ~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g 265 (459)
T PRK11522 186 GALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFG 265 (459)
T ss_pred HHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 5443322 1111 111110000 12788888888654333446778888877777787 457778999999999999
Q ss_pred CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHH--h-
Q 009517 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK--V- 379 (533)
Q Consensus 304 ~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~--~- 379 (533)
+++|+||++++|...|. ... .+..++.|| +.+|+|.++ .| +++|.+++ .+++++.+.. .
T Consensus 266 ~llI~DEV~tG~GRtG~--~~a-----~e~~gv~PD-----ivt~gK~lg--gG~~Pigav~~---~~~i~~~~~~~~~~ 328 (459)
T PRK11522 266 ALLILDEVQTGMGRTGK--MFA-----CEHENVQPD-----ILCLAKALG--GGVMPIGATIA---TEEVFSVLFDNPFL 328 (459)
T ss_pred CEEEeccceecCCccch--hhh-----hhccCCCCC-----EEEechhhh--CCCccceeEEE---cHHHHHHhccCCcc
Confidence 99999999999755553 211 222233677 458999994 47 69999998 8888887642 1
Q ss_pred hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----C-CceEecCCceeEEeccc
Q 009517 380 ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----E-GITCNKAEGAMYLFPRI 454 (533)
Q Consensus 380 ~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-g~~~~~~~gg~~~~~~~ 454 (533)
...|++.++++++++.+.|+. .++ +.+.++.+++.++|++.|+++ | .+.-++..|.|+.+ .+
T Consensus 329 ~~~T~~gnp~~~Aaala~L~~-----------i~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~gi-el 395 (459)
T PRK11522 329 HTTTFGGNPLACAAALATINV-----------LLE-QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAI-EF 395 (459)
T ss_pred cCCCCCCCHHHHHHHHHHHHH-----------Hhc-chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEE-Ee
Confidence 236788899999999888852 221 345667777777888877764 3 23445666655432 23
Q ss_pred CCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 455 QLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
..+. ....++ ..|.++||++.+.. .+.+.+||.+. +++++|++++++|.++++++.+.
T Consensus 396 ~~~~------------~~~~i~-~~l~~~Gvl~~~~~-----~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 396 VDNE------------IGYNFA-SEMFRQRVLVAGTL-----NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred cCch------------HHHHHH-HHHHHCCeEEEecC-----CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2111 012333 44556899997632 12348999985 89999999999999999887654
No 219
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.91 E-value=9.5e-22 Score=206.30 Aligned_cols=371 Identities=12% Similarity=0.046 Sum_probs=233.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 74 ~i~~~~G~~l~D~dG~~------ylD~~sg~~~~----------------------~lGh~----hp~v~~Av~~ql~~~ 121 (504)
T PLN02760 74 VIEKSEGSYVYDINGKK------YLDALAGLWCT----------------------ALGGS----EPRLVAAATEQLNKL 121 (504)
T ss_pred eEEeeeeeEEEECCCCE------EEEcCcCHHhc----------------------ccCCC----CHHHHHHHHHHHhhc
Confidence 56677777777777777 88887664221 11111 689999999999873
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
.. .. .-..+..+....+++.+.+.+. +.+.+.++++++|++|++.+++.++. .++ .+|+..+.+|++.
T Consensus 122 ~~--~~--~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~ 196 (504)
T PLN02760 122 PF--YH--SFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGS 196 (504)
T ss_pred cc--ee--cccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCC
Confidence 21 11 1111233445556666554321 12235799999999999999998741 133 6799999999987
Q ss_pred HHHHHH-hCCe------------EEEEecCCCCCCC-----------CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 229 SASIAL-HGGT------------LVPYYLDEATGWG-----------LETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 229 ~~~~~~-~g~~------------~~~v~~~~~~~~~-----------ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
...... .|.. +..++......+. ...+++++.+... ...++.+||++..+.-.|
T Consensus 197 t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG 274 (504)
T PLN02760 197 TLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGG 274 (504)
T ss_pred hHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCC
Confidence 543322 2221 1111111000000 0124466666431 112577887776666677
Q ss_pred c-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 Q-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
. .++++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|+|.++ .| +++|.
T Consensus 275 ~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~--~~a-----~e~~gv~PD-----ivtlgK~lg--gG~~PigA 340 (504)
T PLN02760 275 VIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT--MFG-----CDKYNIKPD-----LVSLAKALS--SAYMPIGA 340 (504)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch--hhH-----HHhcCCCCc-----EEEeccccc--CCccccce
Confidence 6 45778899999999999999999999999866553 221 222233688 678999994 36 59999
Q ss_pred EEEecCCHHHHHHHHH--------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ ++++++.+.. ....|++.++++++++.+.|+. .++ +.+.++.+++.++|++.|+
T Consensus 341 v~~---~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~-----------i~~-~~l~~~~~~~g~~l~~~L~ 405 (504)
T PLN02760 341 VLV---SPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKI-----------YKE-RNIPEHVNKIAPRFQDGIK 405 (504)
T ss_pred Eee---cHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHH-----------HHh-CCHHHHHHHHHHHHHHHHH
Confidence 988 8999988753 1336788999999999988841 221 2456666777777777776
Q ss_pred cC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 435 SL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 435 ~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
++ +.+..++..|.|+.+ .+..+... ...... ...++ +.+.++||++.++ + +.+||++.
T Consensus 406 ~l~~~~~v~~vrG~Gl~~gi-e~~~~~~~-----~~~~~~~~~~~~~i~-~~~~~~Gvl~~~~-------g-~~lrl~Pp 470 (504)
T PLN02760 406 AFSGSPIIGEIRGTGLILGT-EFVDNKSP-----NDPFPAEWGVGAYFG-AECKKRGMLVRVA-------G-DNIMMSPP 470 (504)
T ss_pred HHhcCCCeeeEEeCceEEEE-EEecCCcc-----cccccchhHHHHHHH-HHHHhCCcEEEec-------C-CEEEEECC
Confidence 54 334556777766553 22211000 000000 12233 4456789999862 1 26899975
Q ss_pred --CCcCcHHHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+++++|++++++++++++++.+
T Consensus 471 l~it~eeid~~~~~l~~al~~~~~ 494 (504)
T PLN02760 471 LIITPEEVDELISIYGKALKATEE 494 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988754
No 220
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=7.8e-22 Score=205.10 Aligned_cols=373 Identities=11% Similarity=0.053 Sum_probs=231.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
+..++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 27 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGH~----~p~v~~Ai~~ql~~~ 74 (445)
T PRK08593 27 VIDHGYGATLTDVDGKT------YIDLLASASSQ----------------------NVGHA----PPRVVEAIKAQADKF 74 (445)
T ss_pred eEEeeeeCEEEeCCCCE------EEECCccHHhh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 44566666666677777 77775553221 11111 689999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. +.......+....+++.+.+.... ...+.|+++++|++|++.+++..+...| .+|+....+|++.......
T Consensus 75 ~~-----~~~~~~~~~~~~~lae~L~~~~p~-~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als 148 (445)
T PRK08593 75 IH-----YTPAYMYHEPLVRLAKKLCELAPG-DFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLS 148 (445)
T ss_pred cC-----ccccccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHh
Confidence 21 111111223344455555443221 1125899999999999999998753344 5788899999987644332
Q ss_pred h-CC-------------eEEEEecCCCCC--CC-CCH-------HHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-CCH
Q 009517 235 H-GG-------------TLVPYYLDEATG--WG-LET-------SEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAE 289 (533)
Q Consensus 235 ~-g~-------------~~~~v~~~~~~~--~~-ld~-------~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~s~ 289 (533)
. +. .+..+|...... +. .+. +.+++.+.... ...++.+||++..++..|.+ +++
T Consensus 149 ~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~ 227 (445)
T PRK08593 149 MSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVP 227 (445)
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCH
Confidence 2 21 122233221100 11 111 33444333210 01368888888888778885 788
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|+|.+ | .|+++|++++ +
T Consensus 228 ~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~--~~a-----~~~~gv~pD-----i~t~gK~l-~-~G~p~gav~~---~ 290 (445)
T PRK08593 228 GYFEALYKFCREHGILFAVDDIQQGLGRTGK--WSS-----ISHFNITPD-----LMSFGKSL-A-GGMPMSAIVG---R 290 (445)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCcCch--HHH-----HHhcCCCCC-----Eeeecccc-c-CCcccEEEEE---c
Confidence 8999999999999999999999999765543 111 111122577 56899999 4 5899999998 8
Q ss_pred HHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecC
Q 009517 370 AEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKA 444 (533)
Q Consensus 370 ~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~ 444 (533)
+++++.+..... .+++.++++++++.+.|+. .++ +.+.++.+++.+++++.|+++ |.+.-++.
T Consensus 291 ~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~-----------l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG 358 (445)
T PRK08593 291 KEIMESLEAPAHLFTTGANPVSCAAALATIDM-----------IED-ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRG 358 (445)
T ss_pred HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHH-----------HHh-ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 999888753332 5778899999988888741 111 245556666666677766653 44556677
Q ss_pred CceeEEecccCCCHHHHHHHHhcCC-CChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKT-VPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
.|.++.+ .+..+... ..+. .....++ ..+.++||++.+. +.+.+|+++. +++++|++++++++
T Consensus 359 ~Gl~~gi-~l~~~~~~-----~~~~~~~~~~~~-~~~~~~Gv~~~~~-------~~~~lr~~p~l~~t~~~id~~~~~l~ 424 (445)
T PRK08593 359 YGLSIGI-DIVSDKKL-----KTRDNEAALKIC-NYCFEHGVVIIAV-------AGNVLRFQPPLVITYEQLDTALNTIE 424 (445)
T ss_pred cceEEEE-EEecCCCc-----CCCcHHHHHHHH-HHHHHCCeEEecc-------CCCEEEEECCCccCHHHHHHHHHHHH
Confidence 7766543 22211000 0000 0012333 4455689999752 1237899885 89999999999999
Q ss_pred HHHHHHHHH
Q 009517 522 DFHKNFMDK 530 (533)
Q Consensus 522 ~~l~~~~~~ 530 (533)
++++++.+.
T Consensus 425 ~~l~~~~~~ 433 (445)
T PRK08593 425 QAFTALEAG 433 (445)
T ss_pred HHHHHHhcc
Confidence 999987654
No 221
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.91 E-value=7.4e-22 Score=201.44 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=163.9
Q ss_pred cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEEEE
Q 009517 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPY 242 (533)
Q Consensus 167 ~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~v 242 (533)
.-..+|+++++++.+ .+..++++++++|+..++..++ .+||+|+++.+.|...... +...|+++..+
T Consensus 40 p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 110 (369)
T cd00614 40 PTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALL-KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV 110 (369)
T ss_pred hhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHc-CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe
Confidence 337788888888864 3567888889999999999998 7999999999999886543 44678888877
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCC
Q 009517 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 243 ~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~ 322 (533)
+.+ |++.+++++++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|....+.. +
T Consensus 111 ~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~--~ 172 (369)
T cd00614 111 DPD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR--P 172 (369)
T ss_pred CCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC--h
Confidence 643 58899998875 7999999999999999998 8899999999999999999997643311 1
Q ss_pred cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCH-HHHHHHHHhhh-ccccCChHHHHHHHHHcC
Q 009517 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSA-EVREQIYKVAS-VNLCSNISGQILASLVMS 399 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~-~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~ 399 (533)
+ ++ ..| +++.|+||.++| +| .++||+++ ++ ++++.+..... .+.+.++..++++...|+
T Consensus 173 ------~--~~---g~D---ivv~S~tK~l~g-~~~~~gG~v~~---~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 234 (369)
T cd00614 173 ------L--EL---GAD---IVVHSATKYIGG-HSDVIAGVVVG---SGEALIQRLRFLRLALGTILSPFDAWLLLRGLK 234 (369)
T ss_pred ------h--hh---CCc---EEEeccceeccC-CCCceEEEEEe---CcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC
Confidence 1 11 233 789999999943 44 88999998 55 88888876654 445566776666655553
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+....++..++.+.+.+.|++.|++.
T Consensus 235 --------------tl~~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 235 --------------TLPLRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred --------------CHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 123345566778888999998886653
No 222
>PRK14012 cysteine desulfurase; Provisional
Probab=99.91 E-value=3.9e-22 Score=206.47 Aligned_cols=321 Identities=14% Similarity=0.130 Sum_probs=210.1
Q ss_pred CHHHHHHHHHHHh--cCCCCCccccCC------CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc-
Q 009517 141 SADSIERAWQILD--QIPGRATGAYSH------SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI- 211 (533)
Q Consensus 141 p~~v~~~~~~~~~--~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~- 211 (533)
|+.+++++.+.+. .... ....... .....++|+.++++++ .++++|++++|+++++..++.++.
T Consensus 16 ~~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~ia~~~g------~~~~~v~~~~g~t~al~~~l~~l~~ 88 (404)
T PRK14012 16 DPRVAEKMMPYLTMDGTFG-NPASRSHRFGWQAEEAVDIARNQIADLIG------ADPREIVFTSGATESDNLAIKGAAH 88 (404)
T ss_pred CHHHHHHHHHHHHhcccCc-CCCchhhHHHHHHHHHHHHHHHHHHHHcC------cCcCeEEEeCCHHHHHHHHHHHHHH
Confidence 7888888888775 2111 0111111 1235567777877764 567889999999999999887663
Q ss_pred --cCCCCeEEEcCCcCcchHHHHHH---hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 212 --RSENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 212 --~~~gd~Vlv~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
..+||+|+++.++|+.....+.. .|++++.++.++ ++.+|++.++++|++ ++++|++++++||||.+
T Consensus 89 ~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~ 160 (404)
T PRK14012 89 FYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRD------DTILVSIMHVNNEIGVI 160 (404)
T ss_pred hhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECcCCCccch
Confidence 25799999999999877555443 599999998874 457899999999976 78999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
.+ +++|.++|+++|+++|+|+++.. |..+ .++ ..+ ..| +++.|++|.+ | |+ ++|++++
T Consensus 161 ~~---~~~I~~la~~~g~~vivD~a~~~----g~~~-~~~----~~~---~~D---~~~~s~~K~~-g-p~-g~G~l~~- 218 (404)
T PRK14012 161 QD---IAAIGEICRERGIIFHVDAAQSV----GKVP-IDL----SKL---KVD---LMSFSAHKIY-G-PK-GIGALYV- 218 (404)
T ss_pred hh---HHHHHHHHHHcCCEEEEEcchhc----CCcc-cCc----ccC---CCC---EEEEehhhcc-C-CC-ceEEEEE-
Confidence 98 88999999999999999999874 2211 111 111 234 5677999976 6 33 6888887
Q ss_pred cCCHHHHHHHHHhh-h------c-cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009517 367 GFSAEVREQIYKVA-S------V-NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG 438 (533)
Q Consensus 367 ~~~~~~~~~l~~~~-~------~-~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 438 (533)
+++....+.+.. . . ..+++........+++. ....+...+.++.++.++++.+.|+++++
T Consensus 219 --~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~----------~~~~~~~~~~~~~~~l~~~l~~~L~~~~~ 286 (404)
T PRK14012 219 --RRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAAR----------IAKEEMATENERIRALRDRLWNGIKDIEE 286 (404)
T ss_pred --ecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 433222222210 0 0 11223333333333332 11123445667778888899999988877
Q ss_pred ceEecC-----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC----------------C
Q 009517 439 ITCNKA-----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV----------------P 497 (533)
Q Consensus 439 ~~~~~~-----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~----------------~ 497 (533)
+.+..+ ...+++|+.+ +. ...+ ...| +++.+..|..|... .
T Consensus 287 i~~~~~~~~~~~~~~~~~~~~--~~-------------~~~~-~~~l--~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (404)
T PRK14012 287 VYLNGDLEQRVPGNLNVSFNY--VE-------------GESL-IMAL--KDLAVSSGSACTSASLEPSYVLRALGLNDEL 348 (404)
T ss_pred EEEeCCccccCCCEEEEEEeC--cC-------------HHHH-HHhC--CCeEEEchhhhCCCCCCCCHHHHHcCCChhh
Confidence 765422 1233344222 11 1122 2333 37777777665321 0
Q ss_pred CCceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 498 g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
..+.||||+. .++++++++++.|+++++.+.
T Consensus 349 ~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 349 AHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred cCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1258999996 889999999999999888763
No 223
>PRK06541 hypothetical protein; Provisional
Probab=99.91 E-value=6.6e-22 Score=206.09 Aligned_cols=373 Identities=14% Similarity=0.070 Sum_probs=234.0
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++.+++++.+++.+.
T Consensus 37 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Av~~q~~~~ 84 (460)
T PRK06541 37 VIVRGEGCYIWDDRGKR------YLDGLAGLFVV----------------------QVGHG----RAELAEAAAKQAGTL 84 (460)
T ss_pred eEEeCcccEEEeCCCCE------EEECCccHHhc----------------------cCCCC----CHHHHHHHHHHHhhC
Confidence 35567777667777777 77776654221 11122 688999999999874
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C-CCeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E-NDGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~-gd~Vlv~~p~~~~~ 228 (533)
.......| ..+....+|+.+.+... ...++++++++|++|++.+++..+.. + ..+|+....+|++.
T Consensus 85 ~~~~~~~~-----~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 157 (460)
T PRK06541 85 AFFPLWSY-----AHPPAIELAERLAALAP--GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGT 157 (460)
T ss_pred cCcccccc-----CCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCc
Confidence 21001112 22334445555554322 22468999999999999999987521 1 36799999999987
Q ss_pred HHHHHHh-CCe------------EEEEecCCCC---CCCCC--------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 229 SASIALH-GGT------------LVPYYLDEAT---GWGLE--------TSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 229 ~~~~~~~-g~~------------~~~v~~~~~~---~~~ld--------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
...+... |.. +..+|..... .|+-+ ++.+++.++.. ....+.+|+++..++++|
T Consensus 158 t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G 235 (460)
T PRK06541 158 TQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGG 235 (460)
T ss_pred chhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCC
Confidence 6544332 111 1222211100 01222 25566666531 112455555555589999
Q ss_pred cCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC-eeEE
Q 009517 285 QVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGY 362 (533)
Q Consensus 285 ~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~-riG~ 362 (533)
.+. +++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|||.+ | .|+ ++|+
T Consensus 236 ~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~--~~a-----~~~~gv~PD-----ivt~gK~l-~-~G~~piga 301 (460)
T PRK06541 236 CFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE--MFG-----CERFGYVPD-----IITCAKGI-T-SGYSPLGA 301 (460)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch--hhh-----hhhcCCCCC-----EEEecccc-c-CCccceeE
Confidence 865 588899999999999999999999999754442 111 111222577 44699999 4 587 9999
Q ss_pred EEEecCCHHHHHHHHHh-----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Q 009517 363 MEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL- 436 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 436 (533)
+++ ++++++.+... ...+++.++++++++.+.|+. .+ .+.+.++++++.++|.+.|+++
T Consensus 302 v~~---~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~-----------l~-~~~~~~~~~~~g~~l~~~L~~l~ 366 (460)
T PRK06541 302 MIA---SDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDI-----------FE-REGLLDHVRDNEPAFRATLEKLL 366 (460)
T ss_pred EEE---cHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHH-----------HH-hccHHHHHHHHHHHHHHHHHHhh
Confidence 998 89998877532 125778899999888888741 11 1345677888888888888776
Q ss_pred --CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC------hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 437 --EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP------DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 437 --~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
|-+..+++.|.|+.+- +..+.. .+..... ....+...|.++||++.+. ..+.+.+||++.
T Consensus 367 ~~~~v~~vrg~Gl~~~ie-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~g~~~lrl~Ppl 435 (460)
T PRK06541 367 DLPIVGDVRGDGYFYGIE-LVKDKA-----TKETFTDDESERLLRGFLSPALFEAGLYCRAD-----DRGDPVVQLAPPL 435 (460)
T ss_pred cCCCeEEEEecceEEEEE-EecCcc-----cccCCcchhhhhhHHHHHHHHHHhCCeEEEec-----CCCCCEEEEECCC
Confidence 2234567788776642 211100 0000000 0112334455789999872 123348999996
Q ss_pred -CCcCcHHHHHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+++++|++++++|+++++++..
T Consensus 436 ~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 436 ISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999987654
No 224
>PRK07482 hypothetical protein; Provisional
Probab=99.90 E-value=9.3e-22 Score=205.23 Aligned_cols=373 Identities=13% Similarity=0.030 Sum_probs=237.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 35 ~i~~a~G~~l~D~dG~~------ylD~~sg~~~~----------------------~lGh~----~p~v~~Av~~q~~~~ 82 (461)
T PRK07482 35 IVEGGEGIRITDAQGRR------YIDAFAGLYCV----------------------NVGYG----RTEVAEAIAEQAKEL 82 (461)
T ss_pred eEEeeeeeEEEECCCCE------EEEcccchhhh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 45677777777778888 88887665432 11222 689999999999873
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
.. .+.+. .-..+.+..+|+.+.+... ...++++++++|++|++.+++..+. .++ .+|+....+|++.
T Consensus 83 ~~--~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~ 156 (461)
T PRK07482 83 AY--YHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGS 156 (461)
T ss_pred Cc--ccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCc
Confidence 21 11110 1123455556666654322 2346899999999999999998851 122 5799899999996
Q ss_pred HHHHHHhCC-------------eEEEEecCCCCC---CCC--------CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 229 SASIALHGG-------------TLVPYYLDEATG---WGL--------ETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 229 ~~~~~~~g~-------------~~~~v~~~~~~~---~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
......... .+..++...... ++. +++.+++.+... ...++.+||++..+...|
T Consensus 157 t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG 234 (461)
T PRK07482 157 GVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGG 234 (461)
T ss_pred cHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCC
Confidence 543332211 111111110000 000 356677777431 123688888887666667
Q ss_pred cC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC-eeEE
Q 009517 285 QV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGY 362 (533)
Q Consensus 285 ~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~-riG~ 362 (533)
++ ++++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+++|.++ .|+ ++|.
T Consensus 235 ~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~--~~a-----~~~~gv~PD-----iv~~gKgl~--gG~~Pi~a 300 (461)
T PRK07482 235 IVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS--MFG-----SDHYGIEPD-----LITVAKGLT--SAYAPLSG 300 (461)
T ss_pred CcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc--hhh-----HHhcCCCCC-----EEEEccccc--cCccccce
Confidence 75 6777899999999999999999999999866653 222 222334788 566899995 385 9999
Q ss_pred EEEecCCHHHHHHHHH--------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ .+++++.+.. ....|++.++++++++.+.|+. .+ .+.+.++.+++.++|.+.|+
T Consensus 301 v~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~-----------~~-~~~l~~~~~~~g~~l~~~L~ 365 (461)
T PRK07482 301 SIV---GEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDI-----------LE-RENLVGNAAEVGAYFRARLR 365 (461)
T ss_pred eee---cHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHH-----------HH-hCCHHHHHHHHHHHHHHHHH
Confidence 988 8888887752 1236788999999999998841 11 13455566667777777776
Q ss_pred cC----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 435 SL----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 435 ~~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
++ |.+..++..|.|+.. .+..... .+..... ...++ ..+.++||++.++. +.+.+|+.+
T Consensus 366 ~l~~~~~~v~~vrG~Glm~gi-el~~~~~-----~~~~~~~~~~~~~~i~-~~~~~~Gvl~~~~~------~~~~i~~~P 432 (461)
T PRK07482 366 AAFGDHPLVGEVRGVGMLAAV-EFVADRD-----DRTPFDPALKIGPQVS-AAALERGVIARAMP------HGDILGFAP 432 (461)
T ss_pred HHHhcCCCEEEEeeceeEEEE-EeccCCC-----cCCCCChhhHHHHHHH-HHHHHCCcEEecCC------CCCEEEEeC
Confidence 43 445667777766543 2321100 0000010 12333 44556899987521 123789986
Q ss_pred --cCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 507 --LPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 507 --~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
.+++++|++++++|+++++++.++
T Consensus 433 pl~it~~ei~~~~~~l~~~l~~~~~~ 458 (461)
T PRK07482 433 PLVLTRAEADEIVAIAKDAVDEVLGR 458 (461)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999887543
No 225
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.90 E-value=1.3e-21 Score=200.34 Aligned_cols=220 Identities=15% Similarity=0.174 Sum_probs=161.3
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch----HHHHHHhC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~----~~~~~~~g 236 (533)
..|+.+. ..+|++++|++.+ .+..+++++++.|+..++..++ .+||+|+++.|.|... ...+...|
T Consensus 54 ~r~~~p~-~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G 123 (391)
T TIGR01328 54 SRLGNPT-VSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTIL-KAGDHLISDECLYGCTFALLEHALTKFG 123 (391)
T ss_pred eCCCCch-HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCcchHHHHHHHHHHhcCC
Confidence 3444443 6789999999975 2447788888899999999888 7999999999988653 34445578
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+++..++.+ |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 124 ~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~ 187 (391)
T TIGR01328 124 IQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPM 187 (391)
T ss_pred eEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhc
Confidence 888888753 78999999876 7999999999999999998 8899999999999999999997543
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe-eEEEEEecCCHHHHHHHHHhhh---ccccCChHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS---VNLCSNISGQI 392 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r-iG~v~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~ 392 (533)
+ +. + + .. ..| +++.|+||.+ |.+|.+ .|++++ ++++++.+..... .+...++..++
T Consensus 188 ~-~~-~------~--~~---g~D---ivv~S~sK~l-gg~g~~~gG~v~~---~~~li~~l~~~~~~~~~g~~l~~~~a~ 247 (391)
T TIGR01328 188 L-TN-P------V--AL---GVD---VVVHSATKYI-GGHGDVVAGLICG---KAELLQQIRMVGIKDMTGSVISPFDAW 247 (391)
T ss_pred c-CC-c------h--hc---CCC---EEEccccccc-cCCCCceEEEEEc---CHHHHHHHHHHHHHhCCCCCCCcHHHH
Confidence 3 11 1 1 11 234 7789999999 667877 466665 8888888775432 22344555555
Q ss_pred HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 393 a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
++...|+ .+..+.++..++.+.+.+.|++.|++.
T Consensus 248 l~l~~L~--------------tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 248 LILRGLK--------------TLNIRMKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHhCcC--------------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 5544442 233345556777788888888876653
No 226
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.90 E-value=1.5e-21 Score=200.36 Aligned_cols=221 Identities=13% Similarity=0.137 Sum_probs=165.3
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC----cchHHHHHHhC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY----PLYSASIALHG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~----~~~~~~~~~~g 236 (533)
..|+.+. ..+|++++|++.+ .++.+++++|+.|+..++..++ .+||+|+++...| ..+...+...|
T Consensus 65 ~r~~~p~-~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 65 SRYGNPT-VSMFEERLRLIEG--------AEACFATASGMSAVFTALGALL-GAGDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred eCCCCch-HHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHh-CCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence 3455544 7789999999864 3478888889999999998888 7999999887554 44556677789
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
++++.++. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 135 ~~v~~vd~-------~d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~ 198 (403)
T PRK07810 135 VETVFVDG-------EDLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPL 198 (403)
T ss_pred cEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccc
Confidence 99998863 289999999987 7999999999999999997 9999999999999999999997643
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHH-HHHHhhh-ccccCChHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVAS-VNLCSNISGQIL 393 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~a 393 (533)
+.. + + .+ ..| |++.|++|.+ +.+|.++ |++++ +++.+. .+..... ...+.+++.+++
T Consensus 199 ~~~--~---~-----~~---gaD---ivv~S~tK~l-~g~g~~~gG~v~~---~~~~~~~~l~~~~~~~g~~~s~~~a~l 258 (403)
T PRK07810 199 LQR--G---L-----PL---GAD---VVVYSGTKHI-DGQGRVLGGAILG---DREYIDGPVQKLMRHTGPALSAFNAWV 258 (403)
T ss_pred cCC--h---h-----hc---CCc---EEEccCCcee-cCCcCceeEEEEe---ChHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 321 1 1 11 234 7899999999 5578887 77776 666554 4554433 445677887777
Q ss_pred HHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
+...|+ .+..+.++..++...+.+.|++.|++..
T Consensus 259 ~l~~L~--------------tl~~R~~~~~~~a~~~a~~L~~~p~v~~ 292 (403)
T PRK07810 259 LLKGLE--------------TLALRVRHSNASALRIAEFLEGHPAVRW 292 (403)
T ss_pred HHhccC--------------cHHHHHHHHHHHHHHHHHHHhcCCCccE
Confidence 766664 2344555566677778888888776553
No 227
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=1.7e-21 Score=199.49 Aligned_cols=297 Identities=14% Similarity=0.088 Sum_probs=197.0
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHh
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALH 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~ 235 (533)
...|+.+. ..+|+++++++.+ .+++++++|+++|+..++.+++ ++||+|+++.|+|..+.. .+...
T Consensus 59 Y~r~~~pt-~~~Le~~lA~l~g--------~~~~l~~~sgt~Ai~~~l~al~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 59 YGLHATPT-SLALAQRLAEIEG--------GRHALLQPSGLAAISLVYFGLV-KAGDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred cCCCCCHH-HHHHHHHHHHHhC--------CCeEEEeccHHHHHHHHHHHHh-CCCCEEEEecCCcccHHHHHHHHHHhc
Confidence 33444433 6788888888753 4689999999999999999998 899999999999998664 45667
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|+++..++.. +.+.+++++++ ++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|...
T Consensus 129 Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 129 GITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred CeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccc
Confidence 9988887632 45778888876 79999999999999754 55999999999999999999999753
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~ 394 (533)
.+.. .+ .. .. .|++.|++|.++|..+.+.|++++ .++++++.+...+. .+.+.++..+..+
T Consensus 193 ~~~~--------~l--~~---Ga---Di~v~S~tK~~~g~~~~~gG~v~~--~~~~~~~~~~~~~~~~G~~~~~~~a~l~ 254 (394)
T PRK07050 193 LAFK--------PF--EH---GV---DISVQALTKYQSGGSDVLMGATIT--ADAELHAKLKLARMRLGIGVSADDCSLV 254 (394)
T ss_pred cccC--------HH--Hc---CC---eEEEEECCceecCCCCeeEEEEEE--CCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 2210 11 11 12 388999999996555577998886 36788888876655 4556666666555
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec------------------CCceeEEecccCC
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK------------------AEGAMYLFPRIQL 456 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~------------------~~gg~~~~~~~~~ 456 (533)
...|+. +....++..++...+.+.|++.|++..+. ..|+++.+. +..
T Consensus 255 lr~l~t--------------l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~-l~~ 319 (394)
T PRK07050 255 LRGLPS--------------LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVV-FDE 319 (394)
T ss_pred HcCCCc--------------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEE-ECC
Confidence 544431 22344445556667888887765543221 124544432 221
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--------------CCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--------------VPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--------------~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
... . .....|+ ..|+..++.+.-|..... ....+.||||+++ |+.+.+++.|.+
T Consensus 320 ~~~-~--------~~~~~~~-~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl--E~~~dl~~dl~~ 387 (394)
T PRK07050 320 RYS-P--------AQVDAFV-EALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL--EDEADLIADLEQ 387 (394)
T ss_pred CCC-H--------HHHHHHH-HcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc--CCHHHHHHHHHH
Confidence 000 0 0112222 334445544433322210 0112589999996 457788888888
Q ss_pred HHHHH
Q 009517 523 FHKNF 527 (533)
Q Consensus 523 ~l~~~ 527 (533)
+++..
T Consensus 388 al~~~ 392 (394)
T PRK07050 388 ALEAA 392 (394)
T ss_pred HHHHh
Confidence 87754
No 228
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=2.7e-21 Score=197.93 Aligned_cols=218 Identities=14% Similarity=0.152 Sum_probs=157.5
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hCCeEEE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVP 241 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~ 241 (533)
.....+|++++|++.+. +..++++++++|+..++..++ ++||+|+++.|+|......+.. .|+++..
T Consensus 60 ~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 60 NPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVL-RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred CccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 34588999999999752 233555667899999999998 8999999999999864433322 4777766
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCC
Q 009517 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (533)
Q Consensus 242 v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~ 321 (533)
++. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .
T Consensus 131 ~d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~--~ 192 (388)
T PRK07811 131 VDL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ--Q 192 (388)
T ss_pred eCC-------CCHHHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC--C
Confidence 653 389999999876 7999999999999998866 999999999999999999999764331 1
Q ss_pred CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCC
Q 009517 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (533)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~ 400 (533)
+ + . + ..| +++.|++|.++|..+.+.||+++ .++++.+.+...+. .....++..+..+...|+
T Consensus 193 p---~-~----~---gaD---ivv~S~sK~l~g~~~~~gG~vv~--~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~- 255 (388)
T PRK07811 193 P---L-A----L---GAD---VVVHSTTKYIGGHSDVVGGALVT--NDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK- 255 (388)
T ss_pred c---h-h----h---CCc---EEEecCceeecCCCCcEEEEEEE--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-
Confidence 1 1 1 1 234 88999999995433467899887 25677776665544 334455555555554443
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 401 PKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+....++..++...+.+.|++.|++.
T Consensus 256 -------------tl~~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 256 -------------TLAVRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 233444556677888888888876654
No 229
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=1.6e-21 Score=203.28 Aligned_cols=380 Identities=13% Similarity=0.057 Sum_probs=233.1
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
.++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+
T Consensus 47 ~~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~ql~~ 94 (464)
T PRK06938 47 LALKRARGIYVEDVEGRQ------FIDCLAGAGTL----------------------ALGHN----HPVVIEAIQQVLAD 94 (464)
T ss_pred ceEEeccccEEEeCCCCE------EEEccCCcccc----------------------ccCCC----CHHHHHHHHHHHHh
Confidence 366778888888888888 77776554322 11222 68899999999874
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCC-CCCEEEc-CChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHH
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLT-DGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSAS 231 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~i~~t-~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~ 231 (533)
........| ..+.+..+|+.+.+....... .+.++++ ++|++|++.+++..+..+| .+|+....+|++....
T Consensus 95 ~~~~~~~~~-----~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~ 169 (464)
T PRK06938 95 ELPLHTLDL-----TTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQG 169 (464)
T ss_pred hhccccccc-----CCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHH
Confidence 211000011 123334455555432211111 1356564 7999999999998863344 6799999999997654
Q ss_pred HHHh-CC------------eEEEEecCCC--CCCC--------CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-C
Q 009517 232 IALH-GG------------TLVPYYLDEA--TGWG--------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-L 287 (533)
Q Consensus 232 ~~~~-g~------------~~~~v~~~~~--~~~~--------ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~ 287 (533)
+... |. .+..++.... ..++ .+++.+++.+.+......++.+||+...+.-.|++ +
T Consensus 170 als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p 249 (464)
T PRK06938 170 ALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPA 249 (464)
T ss_pred HHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCC
Confidence 4332 10 1222322111 0011 13567777776432111257888887666656764 5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+++.+++|.++|++||+++|+||++++|...|. +. ..+..++.|| +.+++|.++ .|+++|.+++
T Consensus 250 ~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~--~~-----a~e~~gv~PD-----iv~~gKglg--gG~PlsAv~~-- 313 (464)
T PRK06938 250 PIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK--MF-----AFEHAGIIPD-----VVVLSKAIG--GSLPLAVVVY-- 313 (464)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcCcH--HH-----HHHhcCCCCC-----EEEeecccc--CCCceEEEee--
Confidence 688899999999999999999999999866553 22 2222334788 667899995 4899999997
Q ss_pred CCHHHHHHHHHh-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEe
Q 009517 368 FSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCN 442 (533)
Q Consensus 368 ~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~ 442 (533)
.+++ +.+... ...|++.++++++++.+.|+ ..+ .+.+.++.+++.++|.+.|+++ |.+.-+
T Consensus 314 -~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~-----------~l~-~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V 379 (464)
T PRK06938 314 -REWL-DTWQPGAHAGTFRGNQMAMAAGSATLR-----------YIK-EHRLAEHAAAMGERLREHLRQLQRDYPQLGDV 379 (464)
T ss_pred -hhHh-hccCCCCCCCCCCcCHHHHHHHHHHHH-----------HHH-HhHHHHHHHHHHHHHHHHHHHHHHhCCCeeee
Confidence 6664 444322 23788999999999999884 111 1345566666667777777654 445667
Q ss_pred cCCceeEEecccCCCHHHHHHHHhcCCC--ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHH
Q 009517 443 KAEGAMYLFPRIQLPEKAIKAAEAEKTV--PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVT 518 (533)
Q Consensus 443 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~ 518 (533)
+..|.|+.+ .+..+....+........ ....++ ..+.++||++.++..++ +.+|+.+. +++++|+++++
T Consensus 380 rG~Glm~gi-e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gll~~~~g~~~-----~~l~~~Ppl~it~~eid~~~~ 452 (464)
T PRK06938 380 RGRGLMLGV-EIVDPQGEPDALGHPPANGELASLIQ-RECLRRGLILELGGRHG-----SVVRFLPPLIITAEQIDEVAE 452 (464)
T ss_pred eccceEEEE-EeccCcccccccccCCccHHHHHHHH-HHHHHCCeEEeecCCCC-----CEEEEECCCccCHHHHHHHHH
Confidence 777766543 232111000000000000 012233 34456899998743232 37999864 89999999999
Q ss_pred HHHHHHHHHH
Q 009517 519 RLTDFHKNFM 528 (533)
Q Consensus 519 ~l~~~l~~~~ 528 (533)
+++++++++.
T Consensus 453 ~l~~~l~~~~ 462 (464)
T PRK06938 453 IFAEAVAAAV 462 (464)
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 230
>PRK05965 hypothetical protein; Provisional
Probab=99.90 E-value=1.1e-21 Score=204.49 Aligned_cols=370 Identities=14% Similarity=0.092 Sum_probs=235.6
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 31 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~i~~Ai~~q~~~~ 78 (459)
T PRK05965 31 VLASAKGATLTDASGHQ------LLDAFAGLWCV----------------------NVGYG----QESIVEAAAEQMREL 78 (459)
T ss_pred eEEeeeEeEEEECCCCE------EEECcccHHhc----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 45666666667777777 77876554321 11122 689999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
.. ...+.. -..+.+..+|+.+.+... ...++++++++|++|++.+++.++.. ++ .+|+....+|++.
T Consensus 79 ~~--~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~ 152 (459)
T PRK05965 79 PY--ATGYFH--FGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGS 152 (459)
T ss_pred CC--cccccc--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcc
Confidence 21 111100 012333445555554322 23468999999999999999987521 22 5799999999997
Q ss_pred HHHHHHh-CCe------------EEEEecCC--CCCCCCC--------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 229 SASIALH-GGT------------LVPYYLDE--ATGWGLE--------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 229 ~~~~~~~-g~~------------~~~v~~~~--~~~~~ld--------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
....... +.. +..++... ...+.-| ++.+++.+... ...++.+||++..+...|+
T Consensus 153 t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~ 230 (459)
T PRK05965 153 SSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGV 230 (459)
T ss_pred cHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCC
Confidence 6432222 210 11222110 0011123 25667767542 1136888988877777776
Q ss_pred -CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEE
Q 009517 286 -VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYM 363 (533)
Q Consensus 286 -~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v 363 (533)
+++++.+++|.++|++||+++|+||++++|...|. +.. .+..++.|| +.+|+|.++ .| +++|.+
T Consensus 231 ~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~--~~a-----~~~~gv~PD-----iv~~gKgl~--gG~~Pi~av 296 (459)
T PRK05965 231 IVPPKGWLKAMREACRELGILFVADEVITGFGRTGP--LFA-----CEAEGVVPD-----LMTVAKGLT--SGYVPMGAV 296 (459)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch--hhh-----HhhcCCCCC-----eEEechhhc--cCCcceeEE
Confidence 56778899999999999999999999999876663 222 222233788 667899995 48 599999
Q ss_pred EEecCCHHHHHHHHH--------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 364 EVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 364 ~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
++ ++++++.+.. ....|++.++++++++.+.|+ ..+ .+.+.++.+++.++|.+.|++
T Consensus 297 ~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~-----------~l~-~~~l~~~~~~~g~~l~~~l~~ 361 (459)
T PRK05965 297 LM---SDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR-----------LYH-EGGLLANGQKAGPRFAAGLDA 361 (459)
T ss_pred EE---cHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHH-----------HHH-hccHHHHHHHHHHHHHHHHHh
Confidence 98 9999987753 123678999999999998884 111 134556667777777777766
Q ss_pred C---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 436 L---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 436 ~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
+ |.+.-++..|.|+.+ .+..... .+..... ...+ ...+.++||++.+. +.+.+|+++.
T Consensus 362 l~~~~~v~~vrG~Gl~~gi-e~~~~~~-----~~~~~~~~~~~~~~i-~~~~~~~Gll~~~~-------g~~~i~~~PpL 427 (459)
T PRK05965 362 LRAHPLVGDVRGRGLLGAL-ELVADKA-----TKTPFDAALDPADRI-FDRAYANGLVFRAF-------GDGVLGFAPAL 427 (459)
T ss_pred hccCCCEEEEeecceEEEE-EEecccc-----ccCCCCchhHHHHHH-HHHHHhCCeEEEec-------CCcEEEEECCC
Confidence 4 445557777766543 2211000 0000000 1223 34456789999852 2347899975
Q ss_pred -CCcCcHHHHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+++++|++++++|.++++++.
T Consensus 428 ~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 428 CCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999998763
No 231
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.90 E-value=2.5e-21 Score=197.96 Aligned_cols=220 Identities=14% Similarity=0.172 Sum_probs=162.6
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc----hHHHHHHhC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~----~~~~~~~~g 236 (533)
..|..+. ..+|++.++++.+ .+.++++++|++|+..++.+++ ++||+|+++.+.|.. +...+...|
T Consensus 49 ~r~~~p~-~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g 118 (380)
T TIGR01325 49 SRYANPT-VAAFEERIAALEG--------AERAVATATGMSAIQAALMTLL-QAGDHVVASRSLFGSTVGFISEILPRFG 118 (380)
T ss_pred ecCCCch-HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence 3455443 7889999998864 3578889999999999999888 799999999988865 334566789
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
.++..++.+ |++.+++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....
T Consensus 119 ~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~ 182 (380)
T TIGR01325 119 IEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPV 182 (380)
T ss_pred CEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 998888753 68999988865 7999999999999999987 8999999999999999999997643
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~ 394 (533)
+. .+ + ++ ..| |++.|++|.+ +.+|.++ |++++ ++++++.+..... .....++..+.++
T Consensus 183 ~~--~p---l-----~~---g~D---ivv~S~sK~l-~g~g~~~gG~vv~---~~~~~~~l~~~~~~~g~~~~p~~a~~~ 242 (380)
T TIGR01325 183 LQ--QP---L-----KL---GAD---VVVYSATKHI-DGQGRVMGGVIAG---SEELMAEVAVYLRHTGPAMSPFNAWVL 242 (380)
T ss_pred cC--Cc---h-----hh---CCC---EEEeecccee-cCCCCeEEEEEEe---CHHHHHHHHHHHHhhCCCCCHHHHHHH
Confidence 31 11 1 11 234 7788999999 5477776 67766 7888888776543 3333344544444
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
...+ +.+....++..++++.+.+.|++.|++.
T Consensus 243 l~~l--------------~tl~~r~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 243 LKGL--------------ETLSLRMQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred Hhcc--------------CcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 3333 2234455566777888888898876654
No 232
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=1.6e-21 Score=202.46 Aligned_cols=369 Identities=13% Similarity=0.069 Sum_probs=229.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 39 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~ql~~~ 86 (441)
T PRK05769 39 VIERGEGVWVEDVDGNV------YLDFNAGIAVT----------------------NVGHA----HPKVVKAVKEQAEKF 86 (441)
T ss_pred eEEecceEEEEeCCCCE------EEECCCchhhc----------------------ccCCC----CHHHHHHHHHHHHhc
Confidence 56677777777778777 88887665332 11222 688999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. ...... ..+....+|+.+.+..+. -..++|+++++|++|++.+++..+...| ++|+....+|++....+..
T Consensus 87 ~~----~~~~~~-~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls 160 (441)
T PRK05769 87 LH----YSLTDF-YYEPAVELAERLVEIAPG-GFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLS 160 (441)
T ss_pred cC----ccCccc-CCHHHHHHHHHHHHhCCC-CCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHH
Confidence 21 111100 123445566666543221 1236899999999999999998763344 6789899999997754433
Q ss_pred h-CC-------------eEEEEecCCCC--CCC-CC--------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCC
Q 009517 235 H-GG-------------TLVPYYLDEAT--GWG-LE--------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLA 288 (533)
Q Consensus 235 ~-g~-------------~~~~v~~~~~~--~~~-ld--------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s 288 (533)
. +. .+..++....- .|. -| ++.+++.+.+....+.++.+|++...+...|. .++
T Consensus 161 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~ 240 (441)
T PRK05769 161 LTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPP 240 (441)
T ss_pred hcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCC
Confidence 3 21 12222221100 011 11 23344422211001236778887766766777 456
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
++.|++|.++|++||+++|+||++++|...|. ...+..+ .+ .|| +.+|||.+ | .|+++|++++
T Consensus 241 ~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~--~~a~~~~--gv---~pD-----ivt~~K~l-~-~G~p~gav~~--- 303 (441)
T PRK05769 241 KNFFKELRKLADKYGILLIDDEVQTGMGRTGK--MFAIEHF--GV---EPD-----IITLAKAI-A-GGLPLGAVIG--- 303 (441)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCcccc--eehhhcc--CC---CCC-----EEEEcccc-c-CCcccEEEEE---
Confidence 78899999999999999999999999766553 2221111 22 567 33689999 4 5899999998
Q ss_pred CHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecC
Q 009517 369 SAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKA 444 (533)
Q Consensus 369 ~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~ 444 (533)
+++++..+......+++.++++++++.+.|+ ..++ .+.++.+++.++|++.|+++ +.+..++.
T Consensus 304 ~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~-----------~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg 370 (441)
T PRK05769 304 RAELMFLPPGSHANTFGGNPVAAAAALATLE-----------ELEE--GLLENAQKLGEYLRKELKELKEKYEFIGDVRG 370 (441)
T ss_pred ehhhhhcCCCCCCCCCCcCHHHHHHHHHHHH-----------HHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence 8888754432334677889999999988884 2232 55667777777888877664 33344566
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
.|.++.+ .+..+.. .........+. ..+.++||++.|. +.+.+|+++. +++++|+++++++++
T Consensus 371 ~G~~~~i-~~~~~~~------~~~~~~~~~~~-~~~~~~Gil~~~~-------~~~~lr~~p~l~~t~~~id~~~~~l~~ 435 (441)
T PRK05769 371 LGLMIGV-ELVKDRK------EPDPKLRDKVL-YEAFKRGLLLLGA-------GKSAIRIIPPLIITEEEADIGLEILEE 435 (441)
T ss_pred ceEEEEE-EeccCCc------cccHHHHHHHH-HHHHhCCcEEecC-------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 6655442 2221100 00000012233 4455689999752 2237899985 699999999999999
Q ss_pred HHHHH
Q 009517 523 FHKNF 527 (533)
Q Consensus 523 ~l~~~ 527 (533)
+++++
T Consensus 436 ~l~~~ 440 (441)
T PRK05769 436 AIKEL 440 (441)
T ss_pred HHHHh
Confidence 98764
No 233
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.90 E-value=2.6e-21 Score=201.21 Aligned_cols=367 Identities=15% Similarity=0.122 Sum_probs=236.3
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
.+.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 39 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~ql~~~ 86 (453)
T PRK06943 39 PVARGEGAWLYDRDGRR------YLDAISSWWVN----------------------LFGHA----NPRINAALKDQLDTL 86 (453)
T ss_pred eEEecccCEEEeCCCCE------EEEcchHHHHh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 45667777777778777 88876553221 11111 689999999999864
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
.......|. .+....+|+.+.+..+ ...+.++++++|++|++.+++..+. .+| .+|+....+|++.
T Consensus 87 ~~~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~ 159 (453)
T PRK06943 87 EHAMLAGCT-----HEPAIELAERLAALTG--GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGE 159 (453)
T ss_pred CCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCC
Confidence 221111121 2334445555554332 1235899999999999999998731 123 6799999999986
Q ss_pred HHHHHHh-CC------------eEEEEecCCCC--CCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeC-CCCCCc
Q 009517 229 SASIALH-GG------------TLVPYYLDEAT--GWGL--------ETSEVKKQLEAAKAKGITVRALVVIN-PGNPTG 284 (533)
Q Consensus 229 ~~~~~~~-g~------------~~~~v~~~~~~--~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~-p~NPtG 284 (533)
....... |. .+..++..... .+.. +++.+++.+... +.++.+||++. .+...|
T Consensus 160 t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAviiEPvvqg~gG 236 (453)
T PRK06943 160 TIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER---AGKIAALIVEPLVQCAAG 236 (453)
T ss_pred cHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEeccccccCC
Confidence 6433322 11 11122221100 0011 246677777532 34788888887 476677
Q ss_pred c-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 Q-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
+ .++++.+++|.++|++||+++|+||++++|...|. +.. .+..++.|| +.+++|.++ .| +++|.
T Consensus 237 ~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~--~fa-----~~~~gv~PD-----ivt~gKgl~--gG~~Pi~a 302 (453)
T PRK06943 237 MAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGT--FFA-----CEQAGVWPD-----FLCLSKGIS--GGYLPLSL 302 (453)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcc--hhH-----HHhCCCCCC-----eEeeehhhc--cCcccceE
Confidence 7 56788899999999999999999999999866553 222 222234788 667899995 48 59999
Q ss_pred EEEecCCHHHHHHHHH-------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 363 MEVTGFSAEVREQIYK-------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
+++ .+++++.+.. ....|++.++++++++.+.|+. .++ +.+.++.+++.++|.+.|++
T Consensus 303 v~~---~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~-----------i~~-~~l~~~~~~~G~~l~~~L~~ 367 (453)
T PRK06943 303 VLS---RDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDL-----------FAE-DDVLARNARKSARLRAALAP 367 (453)
T ss_pred EEE---cHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHH-----------HHh-cCHHHHHHHHHHHHHHHHHH
Confidence 998 8999887753 1336788999999999998841 121 34556666667777777765
Q ss_pred C---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCc
Q 009517 436 L---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQE 510 (533)
Q Consensus 436 ~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~ 510 (533)
+ +++.-++..|.|+.+ .+..+... .......+. ..+.++||++.+. + +.+||++ .+++
T Consensus 368 l~~~~~v~~vrG~Gl~~gv-el~~~~~~-------~~~~~~~i~-~~~~~~Gll~~~~-------g-~~l~~~Ppl~it~ 430 (453)
T PRK06943 368 LAAHPQVRHLRQRGTIFAF-DVALDGDA-------ARTFSRRFF-EAALERELLLRPI-------G-TTVYLMPPYVLDD 430 (453)
T ss_pred HhcCCCEEeEeccccEEEE-EEccCCCc-------chHHHHHHH-HHHHHCCcEEEec-------C-CEEEEeCCCcCCH
Confidence 4 566667777766543 23211000 000012233 4456789999862 1 2689996 4999
Q ss_pred CcHHHHHHHHHHHHHHHHHH
Q 009517 511 DKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 511 e~i~~~~~~l~~~l~~~~~~ 530 (533)
++|++++++|+++++++..+
T Consensus 431 ~eid~~~~~l~~al~~~~~~ 450 (453)
T PRK06943 431 DEIAWLAERTRATLDATLAE 450 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999987543
No 234
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=3e-21 Score=200.75 Aligned_cols=372 Identities=14% Similarity=0.050 Sum_probs=230.6
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 38 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~i~~Ai~~ql~~~ 85 (457)
T PRK05639 38 VPKRGFGALIEDVDGNV------FIDFLAGAAAA----------------------STGYS----HPKLVKAVQEQVALI 85 (457)
T ss_pred eEEeeecCEEEeCCCCE------EEECCcCHHhh----------------------ccCCC----CHHHHHHHHHHHHhc
Confidence 56778888778888888 77876654221 11111 688999999998863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. ....|... +....+++.+.+..+ ...++++++++|+||++.+++..+...| .+|+....+|++....+..
T Consensus 86 ~~-~~~~~~~~----~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s 158 (457)
T PRK05639 86 QH-SMIGYTHS----ERAIRVAEKLAEISP--IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATS 158 (457)
T ss_pred cc-cccCccCC----HHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHH
Confidence 21 11123222 233334555543322 2236899999999999999998863344 6788899999996654333
Q ss_pred h-CC-------------eEEEEecCCCC--CCC----CCHH--------HHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-
Q 009517 235 H-GG-------------TLVPYYLDEAT--GWG----LETS--------EVKKQLEAAKAKGITVRALVVINPGNPTGQ- 285 (533)
Q Consensus 235 ~-g~-------------~~~~v~~~~~~--~~~----ld~~--------~l~~~i~~~~~~g~~~~~iil~~p~NPtG~- 285 (533)
. |. .+..+|..... .|. -|.+ .+++.+......+.++.+||++..+...|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~ 238 (457)
T PRK05639 159 VAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIV 238 (457)
T ss_pred HcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCc
Confidence 2 21 12233322110 000 0232 233333221111237888888877776787
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
.++++.+++|.++|++||+++|+||++++|...|. . +..+..++.|| +.+|+|.++ .|+++|++++
T Consensus 239 ~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~--~-----~a~~~~gv~PD-----iv~~gK~l~--gG~pi~av~~ 304 (457)
T PRK05639 239 VPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK--W-----FASEWFEVKPD-----LIIFGKGVA--SGMGLSGVIG 304 (457)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhccCcCch--H-----HHHHhcCCCCC-----EEEechhhc--CCCcceeEEe
Confidence 56788899999999999999999999999755543 1 12222233678 444899995 4899999998
Q ss_pred ecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceE
Q 009517 366 TGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITC 441 (533)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~ 441 (533)
++++++........+++.++++++++.+.|+ ..+ .+...++.+++.++|++.|+++ +.+.-
T Consensus 305 ---~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~-----------~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~ 369 (457)
T PRK05639 305 ---RKELMDLTSGSALLTPAANPVISAAAEATLE-----------IIE-EENLLKNALKVGEFIKKRLLEMKESFEVIGD 369 (457)
T ss_pred ---hHHHHhhcCCCcccCCCcCHHHHHHHHHHHH-----------HHH-HccHHHHHHHHHHHHHHHHHHHHHhCCCEEe
Confidence 8998873221112567889999988888874 111 1344555666777777777663 33455
Q ss_pred ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHH
Q 009517 442 NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTR 519 (533)
Q Consensus 442 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~ 519 (533)
++..|.|+.+ .+..+... ........++ ..+.++||++.+.. .+.+.+|+++. +++++|++++++
T Consensus 370 VrG~Gl~~gv-e~~~~~~~------~~~~~~~~~~-~~~~~~Gv~~~~~g-----~~~~~lr~~Ppl~it~~~id~~~~~ 436 (457)
T PRK05639 370 VRGKGLMIGV-EIVKENGK------PDPELTGKIC-WRAFELGLILPSYG-----MFGNVIRITPPLVITKEIAEKGLEI 436 (457)
T ss_pred eccceeEEEE-EEecCCCC------CCHHHHHHHH-HHHHhCCeEEeecC-----CCCCEEEEeCCCccCHHHHHHHHHH
Confidence 6777766553 22211100 0000012233 44556899997631 11238999995 899999999999
Q ss_pred HHHHHHHHH
Q 009517 520 LTDFHKNFM 528 (533)
Q Consensus 520 l~~~l~~~~ 528 (533)
|++++++..
T Consensus 437 l~~~l~~~~ 445 (457)
T PRK05639 437 MERAIKDAL 445 (457)
T ss_pred HHHHHHHHH
Confidence 999998764
No 235
>PRK06062 hypothetical protein; Provisional
Probab=99.90 E-value=2.8e-21 Score=201.07 Aligned_cols=368 Identities=14% Similarity=0.131 Sum_probs=233.0
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 38 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~q~~~~ 85 (451)
T PRK06062 38 VIAGAEGSYVWDYEGRR------YLDFSSQLVNT----------------------NIGHQ----HPKVVAAIQEQAARL 85 (451)
T ss_pred eEEeceeeEEEECCCCE------EEEcccCHHhh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 56667777777778887 88876664322 11222 688999999999873
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
.. +.+.. ..+.+..+|+.+.+... ...++|+++++|++|++.+++..+..+| .+|+....+|++....+..
T Consensus 86 ~~-----~~~~~-~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als 157 (451)
T PRK06062 86 CT-----VAPAH-ANDARSEAARLIAERAP--GDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAIN 157 (451)
T ss_pred CC-----cCCcc-CCHHHHHHHHHHHHhCC--CCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHh
Confidence 22 11111 23444555555554322 2246899999999999999998863344 6799999999997654443
Q ss_pred h-CCe-----------EEEEecCCC--CCCC--CC-------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-CCHH
Q 009517 235 H-GGT-----------LVPYYLDEA--TGWG--LE-------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEE 290 (533)
Q Consensus 235 ~-g~~-----------~~~v~~~~~--~~~~--ld-------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~s~~ 290 (533)
. +.. +..++.... ..|. -| ++.+++.++.. ...++.+||++..+.-.|.+ ++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~ 235 (451)
T PRK06062 158 LTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPG 235 (451)
T ss_pred hcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHH
Confidence 2 211 111111110 0011 12 56677777531 11367888888666666765 5788
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCC
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFS 369 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~ 369 (533)
.+++|.++|++||+++|+||++++|...|. . +..+..++.|| +.+|+|.++ .| +++|.+++ .
T Consensus 236 yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--~-----~a~~~~gv~PD-----i~t~gK~lg--gG~~Pigav~~---~ 298 (451)
T PRK06062 236 YLAGVRELCDRHGIVLIADEVMAGFGRTGK--W-----FAIEHFGVVPD-----LITFAKGVN--SGYVPLGGVAI---S 298 (451)
T ss_pred HHHHHHHHHHHcCCEEEeeccccCCCcCcH--H-----HHHHhcCCCCC-----eeeechhhh--cCCcCcEEEEE---c
Confidence 899999999999999999999999755442 1 12222333688 567999994 47 49999998 8
Q ss_pred HHHHHHHHHh---hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHhcC----CCceE
Q 009517 370 AEVREQIYKV---ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA-KTLEDAFNSL----EGITC 441 (533)
Q Consensus 370 ~~~~~~l~~~---~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~L~~~----~g~~~ 441 (533)
+++++.+... ...|++.++++++++.+.|+ ..+. +.+.++.+++. +++.+.|+++ +.+..
T Consensus 299 ~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~-----------~l~~-~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~ 366 (451)
T PRK06062 299 EAIAATFADRPYPGGLTYSGHPLACAAAVATIN-----------AMEE-EGIVENAARIGAEVLGPGLRELAERHPSVGE 366 (451)
T ss_pred HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence 8998887532 23578899999999998884 2211 23445555554 3566666553 43455
Q ss_pred ecCCceeEEecccCCCHHHHHHHHhcCCC-------ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCc
Q 009517 442 NKAEGAMYLFPRIQLPEKAIKAAEAEKTV-------PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDK 512 (533)
Q Consensus 442 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~ 512 (533)
++..|.|+.+ .+..+.. ...... ....+ ...+.++||++.+. . +.+||++ .+++++
T Consensus 367 vrG~Gl~~gv-e~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~l~~~Gvl~~~~------~--~~lrl~ppl~~t~~e 431 (451)
T PRK06062 367 VRGLGVFWAL-ELVADRE-----TREPLAPYGASSAAMAAV-KAACKERGLLPFVN------G--NRIHVVPPCTVTEDE 431 (451)
T ss_pred EeccccEEEE-EEccccc-----ccCCCcccchhhHHHHHH-HHHHHHCCcEEeec------C--CEEEEECCccCCHHH
Confidence 7777766543 2221100 000000 01233 34456789998751 1 2789988 489999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 513 i~~~~~~l~~~l~~~~~ 529 (533)
|++++++++++++++..
T Consensus 432 id~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 432 VREGLAILDAALAVADA 448 (451)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999987653
No 236
>PRK07046 aminotransferase; Validated
Probab=99.90 E-value=6e-22 Score=205.82 Aligned_cols=366 Identities=14% Similarity=0.053 Sum_probs=228.7
Q ss_pred ccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHH
Q 009517 73 RGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQIL 152 (533)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~ 152 (533)
.+.++.++++...++.||++ +||+..|.-.. ++... ++.+++++.+++
T Consensus 57 ~p~~~~~a~G~~v~D~DG~~------yiD~~~g~g~~--------------------~lGh~------~p~i~~Av~~q~ 104 (453)
T PRK07046 57 FPLFVAEARGARFTDVDGHR------YDDFCLGDTGA--------------------MFGHS------PAPVARALAEQA 104 (453)
T ss_pred CCCeEEeeeeCEEEeCCCCE------EEEeccccccc--------------------ccCCC------CHHHHHHHHHHH
Confidence 33467888888888888888 88887665221 11222 689999999999
Q ss_pred hcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHH
Q 009517 153 DQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSAS 231 (533)
Q Consensus 153 ~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~ 231 (533)
.+.. ...+ + .+....+|+.+.+.. ..+++.++++|+||.+.+++..+...| ++|+....+|+++...
T Consensus 105 ~~~~---~~~~-~----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~ 172 (453)
T PRK07046 105 RRGL---TTML-P----SEDAAWVGEELARRF----GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDD 172 (453)
T ss_pred HhCC---CCCC-C----CHHHHHHHHHHHHHh----CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHH
Confidence 8631 1111 2 234444555555443 257999999999999999998864344 6799999999997532
Q ss_pred HHH--hCCeEEE------EecCCCC-----CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHH
Q 009517 232 IAL--HGGTLVP------YYLDEAT-----GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVD 297 (533)
Q Consensus 232 ~~~--~g~~~~~------v~~~~~~-----~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~ 297 (533)
... .+..... ++..... .| -|++.+++.+.. .++.+||++..+...|. .++++.+++|.+
T Consensus 173 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~ 246 (453)
T PRK07046 173 VFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRE 246 (453)
T ss_pred hHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHH
Confidence 221 1111000 0000000 11 178999988843 26888888765544565 556678999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||+++|+||+++ |..+-+ .. .+..++.|| +.+|+|.++ .|+++|++++ .+++++.+.
T Consensus 247 lc~~~g~llI~DEV~t-fr~g~G-g~-------~~~~gv~PD-----i~t~gK~lg--gG~Pi~av~g---~~~i~~~~~ 307 (453)
T PRK07046 247 LTRRYGTLLVIDETHT-ISSGPG-GY-------TRAHGLEPD-----FLVVGKPIA--GGVPCAVYGF---SAELAERAQ 307 (453)
T ss_pred HHHHhCCEEEEEcccc-CccCCc-ch-------hHHhCCCcc-----ceeehhhhc--CCCcceeeee---hHHHHHHHh
Confidence 9999999999999998 433211 11 111123688 557999995 4899999988 999998886
Q ss_pred Hh----------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEec
Q 009517 378 KV----------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNK 443 (533)
Q Consensus 378 ~~----------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~ 443 (533)
.. ...|++.++++++++.+.|+.. + .+...++.+++.+.|++.|++ .+....+.
T Consensus 308 ~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l-----------~-~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~ 375 (453)
T PRK07046 308 AAKASAPPGHSGIGTTLSANALAMAAMRATLAEV-----------M-TEAAYAHMLALAARLAAGLRAVIARHGLPWHVT 375 (453)
T ss_pred hccccCCCCCceeCCCCcccHHHHHHHHHHHHHH-----------h-cccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 31 2357889999999999887521 1 123455555566666666654 32223355
Q ss_pred CCceeEEecccC-CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 444 AEGAMYLFPRIQ-LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 444 ~~gg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
..|.++.+.-.+ .+....+........-...++.. +.++||++.|. + +.+++++.+++++|+++++++++
T Consensus 376 g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~---~-----~~~~~~p~~t~~did~~~~~~~~ 446 (453)
T PRK07046 376 RVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLY-LLNRGVLITPF---H-----NMMLVCPATTAADVDRLVAAFDA 446 (453)
T ss_pred EeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHH-HHHCCCEEecc---c-----CcEEEeCCCCHHHHHHHHHHHHH
Confidence 566654432111 11110000000000001233334 44589999862 1 15789988999999999999999
Q ss_pred HHHHHH
Q 009517 523 FHKNFM 528 (533)
Q Consensus 523 ~l~~~~ 528 (533)
+++++.
T Consensus 447 ~l~~~~ 452 (453)
T PRK07046 447 CLGELL 452 (453)
T ss_pred HHHHHh
Confidence 998754
No 237
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=3.3e-22 Score=203.47 Aligned_cols=311 Identities=15% Similarity=0.142 Sum_probs=203.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcc------cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQG------IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G------~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-- 212 (533)
|+.+++++.+.+..... ....+....+ +.++|+.++++++ .++++|++|+|+++++..++..+..
T Consensus 11 ~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~~~g~t~a~~~~l~~l~~~~ 83 (353)
T TIGR03235 11 DPAVAEAMLPWLLEEFG-NPSSRTHEFGHNAKKAVERARKQVAEALG------ADTEEVIFTSGATESNNLAILGLARAG 83 (353)
T ss_pred CHHHHHHHHHHHHhcCC-CCCchhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCCHHHHHHHHHHHHHHhc
Confidence 78899998887754221 1111111111 4567777777764 5678999999999999999988751
Q ss_pred -CCC-CeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC
Q 009517 213 -SEN-DGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (533)
Q Consensus 213 -~~g-d~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~ 287 (533)
.+| +.|++....|+.+.. .++..|.+++.+++++ ++.+|++++++++++ ++++|++++++||||.++
T Consensus 84 ~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~ 155 (353)
T TIGR03235 84 EQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRP------DTLLVSIMHVNNETGSIQ 155 (353)
T ss_pred ccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCC------CCEEEEEEcccCCceecc
Confidence 245 778888766665543 3455799999999874 457899999999865 789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+ +++|.++|+++|+++|+|+++..... + .++ .+. ..| +++.|.+|.+ |++| +|++++
T Consensus 156 ~---~~~I~~l~~~~~~~~ivD~a~~~g~~----~-~~~----~~~---~~D---~~~~s~~K~~-gp~g--~g~l~~-- 212 (353)
T TIGR03235 156 P---IREIAEVLEAHEAFFHVDAAQVVGKI----T-VDL----SAD---RID---LISCSGHKIY-GPKG--IGALVI-- 212 (353)
T ss_pred C---HHHHHHHHHHcCCEEEEEchhhcCCc----c-ccc----ccc---CCC---EEEeehhhcC-CCCc--eEEEEE--
Confidence 8 89999999999999999999874221 1 111 111 123 6677889976 7666 788877
Q ss_pred CCHHHHHH--HHHhh-------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 009517 368 FSAEVREQ--IYKVA-------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE 437 (533)
Q Consensus 368 ~~~~~~~~--l~~~~-------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 437 (533)
+++.... +.... . ....++.....++..+++ ...+..+.+.++++++++++++.|++ +
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~----------~~~~~~~~~~~~~~~l~~~l~~~l~~-~ 280 (353)
T TIGR03235 213 -RKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE----------IARRNAQAWEVKLRAMRNQLRDALQT-L 280 (353)
T ss_pred -ccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHhcc-C
Confidence 5443211 11100 0 123344455555555553 12234567788899999999999988 4
Q ss_pred CceEecCC-ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC-CCceEEEEecCCcCcHH
Q 009517 438 GITCNKAE-GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP-GTWHFRCTILPQEDKIP 514 (533)
Q Consensus 438 g~~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~-g~~~iRis~~~~~e~i~ 514 (533)
|++++.+. .....++.+.++. . +.+. +...|++ +|.+.+|..|+... +..++|.+++.+++++.
T Consensus 281 g~~~~~~~~~~~~~i~~~~~~~----------~-~~~~-v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~ 346 (353)
T TIGR03235 281 GVKLNGDPAETIPHILNFSIDG----------V-NSEA-LIVNLRA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRAR 346 (353)
T ss_pred CeEEeCCcccccCCEEEEEeCC----------c-CHHH-HHHHHhC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhC
Confidence 98877432 2222222232221 1 1233 4455665 99999999996422 22367888887655443
No 238
>PRK06917 hypothetical protein; Provisional
Probab=99.89 E-value=7.5e-21 Score=197.69 Aligned_cols=378 Identities=13% Similarity=0.095 Sum_probs=236.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.|+++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 16 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----hp~v~~Ai~~ql~~~ 63 (447)
T PRK06917 16 VISHGKGVYLYDQNGNK------YFDGSSGAVTA----------------------GIGHG----VKEIADAIKEQAEEV 63 (447)
T ss_pred eEEeeeeeEEEeCCCCE------EEECchhHHhc----------------------cCCCC----CHHHHHHHHHHHhhC
Confidence 35667777777778777 78876664321 11111 689999999999873
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
. +.+.... ..+.+..+|+.+.+... ...+.+++++++++|++.+++..+. .+| .+|+....+|++.
T Consensus 64 ~----~~~~~~~-~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~ 136 (447)
T PRK06917 64 S----FVYRSQF-TSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGI 136 (447)
T ss_pred c----Ccccccc-CCHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCc
Confidence 2 1111111 12444456666654322 2235899999999999999998831 133 6799999999997
Q ss_pred HHHHHHh-CCe------------EEEEecCCCC--CCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeCCCC-CCc
Q 009517 229 SASIALH-GGT------------LVPYYLDEAT--GWGL--------ETSEVKKQLEAAKAKGITVRALVVINPGN-PTG 284 (533)
Q Consensus 229 ~~~~~~~-g~~------------~~~v~~~~~~--~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~p~N-PtG 284 (533)
...+... +.. +..++..... .++- +++.+++.++.. ...++.+||++..+. -.|
T Consensus 137 t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~EPi~g~~gG 214 (447)
T PRK06917 137 TMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAEPIIGAAGA 214 (447)
T ss_pred cHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCcCc
Confidence 6544332 211 1111111000 0111 235666666542 112688888886554 445
Q ss_pred c-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC-eeEE
Q 009517 285 Q-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGY 362 (533)
Q Consensus 285 ~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~-riG~ 362 (533)
+ .++++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|+|.++ .|+ ++|+
T Consensus 215 ~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~--~~a-----~~~~gv~PD-----i~~~gK~l~--~G~~Pi~a 280 (447)
T PRK06917 215 AVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA--MFA-----MEHWGVEPD-----IMTLGKGLG--AGYTPIAA 280 (447)
T ss_pred eecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc--hhh-----HHhcCCCCC-----EEEeeehhc--cCCcceEE
Confidence 5 66788899999999999999999999999755553 111 122233688 567899994 485 9999
Q ss_pred EEEecCCHHHHHHHHHh-----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Q 009517 363 MEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL- 436 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 436 (533)
+++ .+++++.+... ...|++.++++++++.+.|+ .++ .+.+.++.+++.++|.+.|+++
T Consensus 281 ~~~---~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~-----------~l~-~~~l~~~~~~~g~~l~~~L~~l~ 345 (447)
T PRK06917 281 TVV---SDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLE-----------YME-KHNLPEKAAEKGEYLIKGLQKVQ 345 (447)
T ss_pred EEE---cHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHH-----------HHH-HCCHHHHHHHHHHHHHHHHHHHH
Confidence 998 89998887532 23578899999999988884 111 1245566667777777777664
Q ss_pred ---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--
Q 009517 437 ---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-- 507 (533)
Q Consensus 437 ---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-- 507 (533)
+.+.-++..|.|+.+ .+..+... ...... ...++ ..+.++||++.|+..-......+.+|+++.
T Consensus 346 ~~~~~i~~vrG~Gl~~~i-e~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~ 418 (447)
T PRK06917 346 QQSTIIGDVRGKGLLIGV-EFVADKKT-----KQPFSKSQAVASELI-SVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMT 418 (447)
T ss_pred hcCCCEEEEeecceEEEE-EEeccCCc-----CCCCcchhHHHHHHH-HHHHhCCcEEEecccccCCCCCCEEEEECCCc
Confidence 435567777766543 22111000 000000 22333 445668999987421000111248999986
Q ss_pred CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++++|++++++|.++++++.++
T Consensus 419 it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 419 ITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988654
No 239
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=2.2e-21 Score=196.42 Aligned_cols=302 Identities=11% Similarity=0.119 Sum_probs=200.1
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEE
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLV 240 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~ 240 (533)
..|+.+. ..+|++++|++.+ .+++++++|+++|+.+++. ++ ++||+|+++.+.|..-...+...-...
T Consensus 49 ~R~~~p~-~~~le~~lA~leg--------~~~~v~~~sG~aAi~~~l~-~l-~~GD~VI~~~~~yg~~~~~~~~~~~~~- 116 (364)
T PRK07269 49 TRTKNPT-RAKLEETLAAIES--------ADYALATSSGMSAIVLAFS-VF-PVGSKVVAVRDLYGGSFRWFNQQEKEG- 116 (364)
T ss_pred eCCCCcc-HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHH-Hh-CCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence 3444443 7899999999964 5789999999999999995 55 799999999999987554443321110
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCC
Q 009517 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (533)
Q Consensus 241 ~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~ 320 (533)
.+.. .|..|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+ .
T Consensus 117 ~~~~----~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~-~- 181 (364)
T PRK07269 117 RFHF----TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY-Q- 181 (364)
T ss_pred cEEE----EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-C-
Confidence 1111 235689999999976 7999999999999999886 99999999999999999999754222 1
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcC
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS 399 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~ 399 (533)
.+ + . . ..| |++.|++|.++|....=.|++++ .++++.+.+...+. ...+.+++.++.+...|+
T Consensus 182 ~p---l-~----~---gaD---ivv~S~tK~l~g~~d~~gG~v~~--~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~ 245 (364)
T PRK07269 182 RP---I-E----L---GAD---IVLHSATKYLSGHNDVLAGVVVT--NDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK 245 (364)
T ss_pred Cc---h-h----h---CCc---EEEecCceeccCCCcccceEEEe--CcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence 11 1 1 1 234 88999999985422234678776 35777777765543 345667777777776664
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-E-ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHH
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT-C-NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCR 477 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (533)
.+....++.+++...+.+.|++.|++. + +++.||++.|. +. ......+.- ... ....++.
T Consensus 246 --------------tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~-~~-~~~~~~~f~-~~l-~~~~~~~ 307 (364)
T PRK07269 246 --------------TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFK-VA-DETRIPHIL-NSL-KVFTFAE 307 (364)
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEE-EC-CHHHHHHHH-HhC-CcceEcc
Confidence 245555666778888899998887643 3 47889988875 22 111000000 000 0011122
Q ss_pred HHHHccceEEEcCCCCCC--C--------CCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 478 RLLNATGIVLVPGSGFGQ--V--------PGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 478 ~ll~~~gV~v~pg~~f~~--~--------~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
.+.....+.+.|+..+.. . -..+.||||+++ |+.+.+++-|+++++
T Consensus 308 slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl--E~~~dli~dl~~al~ 363 (364)
T PRK07269 308 SLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI--EDARDLIADLKQALE 363 (364)
T ss_pred CCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHhc
Confidence 233345666667544321 0 113489999996 457888888888764
No 240
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.89 E-value=9e-22 Score=204.13 Aligned_cols=365 Identities=13% Similarity=0.031 Sum_probs=227.8
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 38 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~~ 85 (428)
T PRK12389 38 VMERGKGAYFYDVDGNK------YIDYLAAYGPI----------------------ITGHA----HPHITKAITEAAENG 85 (428)
T ss_pred EEEeccCCEEEeCCCCE------EEEcccccccc----------------------ccCCC----CHHHHHHHHHHHHhC
Confidence 56677777777778777 78876554321 11111 688999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~ 234 (533)
. ..+.+. +....+++.+.+... ..++++++++|++|++.+++..+...| .+|+....+|++....+..
T Consensus 86 ~----~~~~~~----~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~ 154 (428)
T PRK12389 86 V----LYGTPT----ELEIEFAKMLKEAIP---SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLV 154 (428)
T ss_pred C----ccCCCC----HHHHHHHHHHHHhCC---CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHH
Confidence 2 112222 333445555543322 246899999999999999998863344 6789899999997654443
Q ss_pred h-CCeEEEE--ec----C--CCCCC----CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-CCHHHHHHHHHHHH
Q 009517 235 H-GGTLVPY--YL----D--EATGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCK 300 (533)
Q Consensus 235 ~-g~~~~~v--~~----~--~~~~~----~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~s~~~l~~i~~l~~ 300 (533)
. |...... |. . ...++ ..|++.+++.++.. +.++.+|+++..++..|.+ ++++.+++|.++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~ 231 (428)
T PRK12389 155 AAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAH 231 (428)
T ss_pred hcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 3 2111100 00 0 00000 12788999888643 2367888888777777864 56788999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH--
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK-- 378 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~-- 378 (533)
+||+++|+||++++| ..+. . ...+..++.|| +.+|+|.++ .|+++|.+++ ++++++.+..
T Consensus 232 ~~g~llI~DEV~tG~-Rt~~--~-----~a~~~~gv~PD-----ivt~gK~lg--gG~Pi~av~~---~~~i~~~~~~~~ 293 (428)
T PRK12389 232 EAGALVIYDEVITAF-RFMY--G-----GAQDLLGVEPD-----LTALGKIIG--GGLPIGAYGG---RKDIMEQVAPLG 293 (428)
T ss_pred HcCCEEEEEcccccc-ccCc--c-----hhhHHhCCCCC-----eeeechhhc--CCCceeEEeE---HHHHHhhhccCC
Confidence 999999999999997 3331 1 11121223678 568999995 4899999987 8999988753
Q ss_pred --hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCc-eEecCCceeEEe
Q 009517 379 --VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGI-TCNKAEGAMYLF 451 (533)
Q Consensus 379 --~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~-~~~~~~gg~~~~ 451 (533)
....|++.++++++++.+.|+. +++ +.+.++.+++.++|++.|+++ +.+ .+....| ++..
T Consensus 294 ~~~~~~T~~gnpl~~Aaala~L~~-----------l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi 360 (428)
T PRK12389 294 PAYQAGTMAGNPASMAAGIACLEV-----------LQQ-EGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTV 360 (428)
T ss_pred CcccccCCccCHHHHHHHHHHHHH-----------Hhc-ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEE
Confidence 1236788999999999888852 111 235566666777777777653 222 2334444 4322
Q ss_pred cccC-CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 452 PRIQ-LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 452 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
.+. .+.................+ ...+.++||++.|.. .+.+.+++.+++++|+++++++++++++
T Consensus 361 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gv~~~~~~-------~~~~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 361 -YFTDEKVTNYDQAERSDGEAFGKF-FKLMLNQGINLAPSK-------YEAWFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred -EEeCCCCCChhhhcccCHHHHHHH-HHHHHHCCcEeecCC-------CCCeeecCCCCHHHHHHHHHHHHHHHHh
Confidence 121 11100000000000001233 345566899998741 1134677779999999999999998864
No 241
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=9.4e-21 Score=192.51 Aligned_cols=221 Identities=14% Similarity=0.141 Sum_probs=166.6
Q ss_pred cccCCC--cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HH
Q 009517 161 GAYSHS--QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----AL 234 (533)
Q Consensus 161 ~~Y~~~--~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~ 234 (533)
..|+.. .+..+|++++|++.+ .+++++++|+++|+..++..++ ++||+|++++|.|.++...+ ..
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all-~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFL-KAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 446653 335799999998853 3478999999999999999888 89999999999998776533 44
Q ss_pred hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 235 ~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
.|.++..++.. +.+.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 124 ~Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 124 FGIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred cceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCccc
Confidence 67777766432 46788888876 7999999999999988755 99999999999999999999975
Q ss_pred ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHH
Q 009517 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQIL 393 (533)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a 393 (533)
... ..| + ++ ..| |++.|.+|.++|..+...|+++. ++++.+.+..... ...+.++..+..
T Consensus 188 p~~--~~P---l-----~~---GaD---ivv~S~tK~l~Gh~d~~~G~~~~---~~~~~~~l~~~~~~~G~~~~p~~a~l 248 (394)
T PRK09028 188 PIN--SRP---F-----EM---GVD---ISIQAATKYIVGHSDVMLGTATA---NEKHWDQLREHSYLMGQCTSPDDVYL 248 (394)
T ss_pred ccc--CCc---c-----cc---Cce---EEEEeCCeEecCCCCEEEEEEEC---CHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 321 111 1 11 234 88999999998766688998765 7777776665443 455667777776
Q ss_pred HHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
+..-|+ .+..+.++..++...+.+.|++.|.+
T Consensus 249 ~~rgl~--------------TL~lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 249 AMRGLR--------------TLGVRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHcccC--------------cHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 666553 24555666677888899999887654
No 242
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.89 E-value=1.1e-21 Score=198.00 Aligned_cols=304 Identities=12% Similarity=0.143 Sum_probs=201.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vl 219 (533)
++++++++.+++.+.... ...|.. ....+|.+.++++. ..+.+++++++++|++.+++.+...+| ++|+
T Consensus 42 ~p~v~~ai~~ql~~~~~~-~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii 111 (364)
T PRK04013 42 HPEWVEEMSEQLEKLVVA-GPMFEH-EEKEEMLEELSKWV--------NYEYVYMGNSGTEAVEAALKFARLYTGRKEII 111 (364)
T ss_pred CHHHHHHHHHHHHhcCCc-cCCcCC-HHHHHHHHHHHhhc--------CCCEEEEeCchHHHHHHHHHHHHHHhCCCEEE
Confidence 588999999999874321 112322 22344444444442 246899999999999999998864456 8999
Q ss_pred EcCCcCcchHHHHHHhCC--------e-----EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-
Q 009517 220 CPIPQYPLYSASIALHGG--------T-----LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ- 285 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~--------~-----~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~- 285 (533)
....+|++.......... . +..+| | .|++.+++.+.+ ++++|+++..+...|.
T Consensus 112 ~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~------~-~d~~~l~~~i~~------~~aAvivEpi~g~gG~~ 178 (364)
T PRK04013 112 AMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP------F-NDVEAAKEAITK------ETAAVIFEPIQGEGGIV 178 (364)
T ss_pred EECCccccCchhhccCCCCcccccCCCCCCCCcEEec------C-CCHHHHHHHhcC------CcEEEEEcCCcCCCCCc
Confidence 999999997644433211 1 11111 1 267888888864 7899998887776676
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
.++++.|++|.++|++||+++|+||+++++ ..|. +..+ +..+..|| +.+|+|.++ .|+++|.++.
T Consensus 179 ~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~--~~a~-----~~~gv~PD-----iv~~gK~lg--gG~P~~a~~~ 243 (364)
T PRK04013 179 PAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK--FLAI-----EHYKVEPD-----IVTMGKGIG--NGVPVSLTLT 243 (364)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCc--hhHH-----HhcCCCCC-----EEEeccccc--CCceeEEEEe
Confidence 556788999999999999999999999998 6553 2222 11222688 667899995 4899999987
Q ss_pred ecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCC
Q 009517 366 TGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAE 445 (533)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 445 (533)
+.++.. .....|++.++++++++.+.|+. .++ +.+.++.++. + ..+.. +.+.-++..
T Consensus 244 ---~~~~~~---~~~~~T~~gnp~~~aaa~a~l~~-----------i~~-~~l~~~~~~~---l-~~l~~-~~v~~vRG~ 300 (364)
T PRK04013 244 ---NFDVER---GKHGSTFGGNPLACKAVAVTLRI-----------LRR-ERLVEKAGEK---F-IEIKG-ERVVTTRGR 300 (364)
T ss_pred ---cccccC---CCcCCCCCcCHHHHHHHHHHHHH-----------HHh-ccHHHHHHHH---H-HHhcc-CcceeeeeC
Confidence 555421 12337889999999999988852 111 1222222221 2 22222 345567777
Q ss_pred ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 446 GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
|.|..+ .+..| ...+. ..+.++||++.+. +.+.+||.+. ++++++++++++|+++
T Consensus 301 Gl~~gv-e~~~~--------------~~~i~-~~~~~~Gll~~~~-------g~~vlr~~Ppl~it~~~i~~~~~~l~~~ 357 (364)
T PRK04013 301 GLMIGI-VLKKP--------------VGKYV-EELQNRGYLVHTA-------GQRVIRLLPPLIISKDTMEEAKSAIEGV 357 (364)
T ss_pred cEEEEE-EeCCc--------------HHHHH-HHHHhCCcEEeeC-------CCCEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 765443 23211 12223 4455689999752 2348999995 8999999999999999
Q ss_pred HHHHH
Q 009517 524 HKNFM 528 (533)
Q Consensus 524 l~~~~ 528 (533)
++++.
T Consensus 358 l~~~~ 362 (364)
T PRK04013 358 INDIL 362 (364)
T ss_pred HHHHh
Confidence 98753
No 243
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.89 E-value=4.2e-21 Score=188.29 Aligned_cols=324 Identities=18% Similarity=0.230 Sum_probs=228.4
Q ss_pred CHHHHHHHHHHHhcCCCC--CccccCC--CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh--cc--
Q 009517 141 SADSIERAWQILDQIPGR--ATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--IR-- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~--~~~~Y~~--~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l--~~-- 212 (533)
.+++++++...+....++ +.+.|+. ...+.+-|+.||+.++ +++++|++|+|++|+.+++++.+ ..
T Consensus 14 ~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llg------a~~~eIiFTSG~TEsnNlaI~g~~~a~~~ 87 (386)
T COG1104 14 DPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLG------ADPEEIIFTSGATESNNLAIKGAALAYRN 87 (386)
T ss_pred CHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhC------CCCCeEEEecCCcHHHHHHHHhhHHhhhc
Confidence 688999998888764221 2334432 2235677888888886 67899999999999999999973 21
Q ss_pred -CCCCeEEEcCCcCcchHHHHHHh---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 213 -SENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 213 -~~gd~Vlv~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
+.|..|+++.--++...+.++.+ |.++.++|++..+ .+|+++|+++|++ +|.+|.+...||.||++.|
T Consensus 88 ~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G--~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQp 159 (386)
T COG1104 88 AQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNG--LVDLEQLEEALRP------DTILVSIMHANNETGTIQP 159 (386)
T ss_pred ccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCC--eEcHHHHHHhcCC------CceEEEEEecccCeeeccc
Confidence 14678999998998888777776 9999999998743 7899999999998 8999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|.++|+++++++.+|.++.- |..+ ..+..+ .-| +...|-+|.. |+.| +|++..
T Consensus 160 ---I~ei~~i~k~~~i~fHvDAvQa~----Gkip-i~~~~~-------~vD---~ls~SaHK~~-GpkG--iGaLyv--- 215 (386)
T COG1104 160 ---IAEIGEICKERGILFHVDAVQAV----GKIP-IDLEEL-------GVD---LLSFSAHKFG-GPKG--IGALYV--- 215 (386)
T ss_pred ---HHHHHHHHHHcCCeEEEehhhhc----Ccee-cccccc-------Ccc---eEEeehhhcc-CCCc--eEEEEE---
Confidence 99999999999999999999974 4322 221111 112 4455667976 7666 577765
Q ss_pred CHHHH--HHHHHh---hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCceE
Q 009517 369 SAEVR--EQIYKV---AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-EGITC 441 (533)
Q Consensus 369 ~~~~~--~~l~~~---~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~ 441 (533)
.+.+. ..+.-. .. .....|..+.++...+++ .-.++++....++++.|+.|.+.|.+. |.+.+
T Consensus 216 ~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~----------~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~ 285 (386)
T COG1104 216 RPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAE----------IAVEELEEENARLRKLRDRLEDGLLEIIPDVYL 285 (386)
T ss_pred CCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 33221 111111 11 123335555555555443 133556667778889999999999876 77665
Q ss_pred ecC------CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----------------CC
Q 009517 442 NKA------EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP----------------GT 499 (533)
Q Consensus 442 ~~~------~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~----------------g~ 499 (533)
... .-..+.|.+++ .+. ....|..+||++..|+.+.... -.
T Consensus 286 ~g~~~~rlP~~~~~~f~gv~----------------gE~-ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~ 348 (386)
T COG1104 286 NGDDEPRLPNILNFSFPGVE----------------GES-LLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAH 348 (386)
T ss_pred cCCcccCCCCeEEEEeCCCc----------------HHH-HHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhC
Confidence 433 22333333322 222 3366788899999999985321 13
Q ss_pred ceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 500 WHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 500 ~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+.||||++ .++++++.+++.|.++++++++
T Consensus 349 ~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 349 GSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred ccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 47999997 8889999999999999998865
No 244
>PRK07678 aminotransferase; Validated
Probab=99.89 E-value=4.1e-21 Score=200.07 Aligned_cols=372 Identities=13% Similarity=0.055 Sum_probs=230.2
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 32 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~~ 79 (451)
T PRK07678 32 VVAKAEGAWVTDIQGNR------YLDGMSGLWCV----------------------NVGYG----RKELAEAAYEQLKTL 79 (451)
T ss_pred eEEeeeeeEEEeCCCCE------EEEccccHHhh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 45667777777778877 77776553221 11111 688999999998864
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
... ...|. .+....+|+.+.+..+ ..+.++++++|++|++.+++..+.. +| .+|+....+|++.
T Consensus 80 ~~~-~~~~~-----~~~~~~lae~l~~~~~---~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~ 150 (451)
T PRK07678 80 SYF-PLTQS-----HEPAIKLAEKLNEWLG---GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGN 150 (451)
T ss_pred Ccc-ccccC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 220 11111 2233345555544322 1358999999999999999987521 23 5799999999997
Q ss_pred HHHHHHh-CCe------------EEEEecCCCC--CCCC-----C---HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 229 SASIALH-GGT------------LVPYYLDEAT--GWGL-----E---TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 229 ~~~~~~~-g~~------------~~~v~~~~~~--~~~l-----d---~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
...+... |.. +..++..... .|+. | ++.+++.++.. .+.++.+||++..+.-.|+
T Consensus 151 t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~ 228 (451)
T PRK07678 151 SMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGV 228 (451)
T ss_pred cHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCc
Confidence 6544432 211 1122211100 0110 1 12345555421 1237888888876655676
Q ss_pred C-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEE
Q 009517 286 V-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYM 363 (533)
Q Consensus 286 ~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v 363 (533)
+ ++++.+++|.++|++||+++|+||++++|...|. ...+ +..++.|| +.+|+|.++ .| +++|.+
T Consensus 229 ~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~~~-----~~~gv~PD-----ivt~gK~lg--gG~~Pi~av 294 (451)
T PRK07678 229 LMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK--AFGF-----MNYGVKPD-----IITMAKGIT--SAYLPLSAT 294 (451)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch--hHHH-----HhcCCCCC-----EEEeecccc--cCCcceeEE
Confidence 4 6778899999999999999999999999866653 2221 11233688 567899995 37 799999
Q ss_pred EEecCCHHHHHHHHH-------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 009517 364 EVTGFSAEVREQIYK-------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS- 435 (533)
Q Consensus 364 ~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~- 435 (533)
++ .+++++.+.. ....|++.++++++++.+.|+ ..++ +.+.++.+++.++|.+.|++
T Consensus 295 ~~---~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~-----------~l~~-~~~~~~~~~~g~~l~~~l~~~ 359 (451)
T PRK07678 295 AV---KKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLE-----------IMEN-ENLIERSAQLGELLLEQLKEE 359 (451)
T ss_pred EE---cHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 98 9999988763 134788999999999998884 1111 23455566666666666644
Q ss_pred ---CCCceEecCCceeEEecccCCCHHHHHHHHhcCCC-C-hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--C
Q 009517 436 ---LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV-P-DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--P 508 (533)
Q Consensus 436 ---~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~ 508 (533)
.+.+..++..|.|+.+. +..+.. .....+ . ...+ ...+.++||++.+..... ..+.+.+||++. +
T Consensus 360 ~~~~~~v~~vrg~Gl~~~i~-~~~~~~-----~~~~~~~~~a~~i-~~~l~~~Gv~~~~~g~~v-~~~~~~lrl~Ppl~i 431 (451)
T PRK07678 360 LGEHPLVGDIRGKGLLVGIE-LVNDKE-----TKEPADNDKVASV-VAACKEKGLIIGKNGDTV-AGYNNVLTLSPPLVI 431 (451)
T ss_pred HhcCCCEEEEEeeceEEEEE-EecCCc-----ccCcCchHHHHHH-HHHHHHCCcEEeecCccc-cCCCCEEEEECCCcC
Confidence 34455577777665432 211000 000000 0 1223 344566899997632110 122347999985 7
Q ss_pred CcCcHHHHHHHHHHHHHHH
Q 009517 509 QEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 509 ~~e~i~~~~~~l~~~l~~~ 527 (533)
++++|++++++++++++++
T Consensus 432 t~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 432 SSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 245
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=5.9e-20 Score=183.58 Aligned_cols=325 Identities=17% Similarity=0.151 Sum_probs=229.9
Q ss_pred CHHHHHHHHHHHhcCCC---CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
++++++++.+.+.+... ....-++...-..+|.+.+|+|++ .+..++.+++-.|...++.+++ +++|.
T Consensus 55 ~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--------~e~al~f~SGy~AN~~~i~~l~-~~~dl 125 (388)
T COG0156 55 HPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--------AEAALLFSSGFVANLGLLSALL-KKGDL 125 (388)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--------CCcEEEEcccchhHHHHHHHhc-CCCcE
Confidence 57789999888887421 012223333436678888888864 5567777777788899999998 78999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+...-.+......++..+++.+.+.- .|+++||+.+++.+..+.+.+.|++...-...|.+.+ +++|++
T Consensus 126 i~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~ 195 (388)
T COG0156 126 IFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVE 195 (388)
T ss_pred EEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHH
Confidence 999999999999999999999988873 4899999999885433333456666677778899988 999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
++++|+.++++||+|+-.++++... .++... +..+....|+++||||+| |-.| ||+.+ +..+++.+.
T Consensus 196 L~~ky~a~L~VDEAHa~Gv~G~~Gr-----G~~e~~-g~~~~~vdi~~gTlsKAl-Gs~G---g~v~g---~~~~~d~L~ 262 (388)
T COG0156 196 LAEKYGALLYVDEAHAVGVLGPNGR-----GLAEHF-GLEPEEVDIIVGTLGKAL-GSSG---GYIAG---SAALIDYLR 262 (388)
T ss_pred HHHHhCcEEEEEccccccccCCCCc-----cHHHHh-CCCCccceEEEEEchhhh-cccC---ceeeC---cHHHHHHHH
Confidence 9999999999999999888864321 111111 112343468999999999 4344 88887 999999987
Q ss_pred Hhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEeccc
Q 009517 378 KVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 454 (533)
Q Consensus 378 ~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~ 454 (533)
.... .+.+.+|...+++..+|+ .+++....+++++++..+++..+... |+.+.+....+.-+ -+
T Consensus 263 ~~ar~~ifStalpP~~aaa~~~al~-----------~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~~s~s~I~pv-~~ 329 (388)
T COG0156 263 NRARPFIFSTALPPAVAAAALAALR-----------ILEEGPERRERLQELAAFFRSLLKAL-GLVLLPSESPIIPV-IL 329 (388)
T ss_pred HhCCceeccCCCCHHHHHHHHHHHH-----------HHHhCHHHHHHHHHHHHHHHHHHHhc-CCccCCCCCCeeee-Ee
Confidence 7543 223445555555666653 33444567777888888888666665 66654444333322 12
Q ss_pred CCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 455 QLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
..+. ....+...++++ ||++.+-.....+.|...+|+++. +++++|+.+++.+.++
T Consensus 330 gd~~------------~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 330 GDEE------------RALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCHH------------HHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 2221 134445566655 999998776666777779999995 8999999999888764
No 246
>PRK05968 hypothetical protein; Provisional
Probab=99.89 E-value=1e-20 Score=193.76 Aligned_cols=284 Identities=14% Similarity=0.084 Sum_probs=192.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch----HHHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~ 244 (533)
..+|++++|++.+ .+..+++++|+.|+..++..++ .+||+|+++.+.|... ...+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFV-EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 6789999998875 2344556677789999998887 7999999999999863 3456667999888863
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
. |++.+++++ + ++++|++++|+||++. ..++++|+++|+++|+++|+|++|....+.. +
T Consensus 136 ~-------d~~~l~~~i-~------~tklV~ie~pt~~~~~---~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--p-- 194 (389)
T PRK05968 136 R-------DEEAVAKAL-P------GAKLLYLESPTSWVFE---LQDVAALAALAKRHGVVTMIDNSWASPVFQR--P-- 194 (389)
T ss_pred C-------CHHHHHHhc-c------cCCEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcchhccC--c--
Confidence 2 789999887 3 6899999877766654 4669999999999999999999997644321 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh--ccccCChHHHHHHHHHcCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPPK 402 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~ 402 (533)
+ . + ..| +++.|++|.++|..+.+.|+++. ++++++++..... .....+++.+.++...|+
T Consensus 195 -~-~----~---g~D---ivv~S~tK~l~g~~~~~gG~i~~---~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~--- 256 (389)
T PRK05968 195 -I-T----L---GVD---LVIHSASKYLGGHSDTVAGVVAG---SKEHIARINAEAYPYLGAKLSPFEAWLLLRGLR--- 256 (389)
T ss_pred -h-h----c---CCc---EEEeeccccccCCCCeEEEEEEE---CHHHHHHHHHHHHHhCCCCCChHHHHHHHcccC---
Confidence 1 1 1 123 77889999995433468999887 8888888776443 334556666666655553
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-C------------CceeEEecccCCCHHHHHHHHhcCC
Q 009517 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-A------------EGAMYLFPRIQLPEKAIKAAEAEKT 469 (533)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~------------~gg~~~~~~~~~~~~~~~~~~~~~~ 469 (533)
.+....++..++.+.+.+.|++.|++..+. | .||++.| +++ .+.
T Consensus 257 -----------tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf-~~~--~~~--------- 313 (389)
T PRK05968 257 -----------TLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSF-IFR--EGI--------- 313 (389)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEE-EEC--CHH---------
Confidence 233344445566778889999888875543 3 1345444 232 111
Q ss_pred CChHHHHHHHHHccceEEEcCCCCC------------C------CCC--CceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 470 VPDAFYCRRLLNATGIVLVPGSGFG------------Q------VPG--TWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 470 ~~~~~~~~~ll~~~gV~v~pg~~f~------------~------~~g--~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
....|+ ..|+..++.+.-|..+. . ..| .+.||+|+++ |+.+.+++.|++++++.
T Consensus 314 -~~~~f~-~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl--E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 314 -DVRAFA-DALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL--EGTEALWADLEQALAAA 387 (389)
T ss_pred -HHHHHH-HhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHHh
Confidence 123333 44555666555554443 0 011 3589999996 45678888888888754
No 247
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.89 E-value=7.6e-22 Score=203.64 Aligned_cols=372 Identities=12% Similarity=0.046 Sum_probs=226.4
Q ss_pred cccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHH
Q 009517 72 VRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQI 151 (533)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~ 151 (533)
+.+.++.++++...++.||++ +||+..|.... ..+++ ++.+++++.++
T Consensus 34 ~~p~~i~~a~G~~l~D~dG~~------yiD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q 81 (433)
T PRK00615 34 ITPPIVSSASGDIFIDSLGKT------FIDFCGSWGSL----------------------IHGHS----HPKICDAIQQG 81 (433)
T ss_pred CCCceEEEeeeCEEEECCCCE------EEEcccchhcc----------------------ccCCC----CHHHHHHHHHH
Confidence 344467778888878788887 88886664322 11111 68999999999
Q ss_pred HhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHH
Q 009517 152 LDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSA 230 (533)
Q Consensus 152 ~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~ 230 (533)
+.+.. ...+ +. +....+|+.+.+..+ ...+.|.++++|+||++.+++..+...| .+|+....+|+++..
T Consensus 82 ~~~~~---~~~~-~~----~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td 151 (433)
T PRK00615 82 AERGT---SYGL-TS----EQEILFAEELFSYLG--LEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHAD 151 (433)
T ss_pred HHhCC---CCCC-CC----HHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCc
Confidence 98632 1111 22 233445555544332 2236899999999999999998864345 678888999999652
Q ss_pred H---HHHhCCeE-----EEEecCC-CCC---C-CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC-CCHHHHHHHH
Q 009517 231 S---IALHGGTL-----VPYYLDE-ATG---W-GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIV 296 (533)
Q Consensus 231 ~---~~~~g~~~-----~~v~~~~-~~~---~-~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~-~s~~~l~~i~ 296 (533)
. ....+... ..+.... ... + .-|++.+++.+... +.++.+||+.......|.. ++++.+++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~ 228 (433)
T PRK00615 152 TLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGII 228 (433)
T ss_pred ccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHH
Confidence 2 11111100 0000000 000 0 12688899888653 2357777777666666764 4677899999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+||++.++ ..|. .. ..+..++.|| +.+|+|.++ .|+++|++++ ++++++.+
T Consensus 229 ~lc~~~g~llI~DEv~tG~-R~G~--~g-----a~~~~gv~PD-----i~~~gK~lg--gG~p~~av~~---~~~i~~~~ 290 (433)
T PRK00615 229 QTCRRTGSLSIMDEVVTGF-RVAQ--GG-----AAAIYHVKPD-----ITVYGKILG--GGLPAAAVVA---HKSIMDHL 290 (433)
T ss_pred HHHHHcCCEEEEEcccccc-cccH--hH-----HHHhcCCCCC-----eEEEccccc--CCcceeeeee---cHHHHhhh
Confidence 9999999999999999987 4442 11 1222223677 346899994 4899999998 99999888
Q ss_pred HHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC--ceEecCCce
Q 009517 377 YKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EG--ITCNKAEGA 447 (533)
Q Consensus 377 ~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g--~~~~~~~gg 447 (533)
... ...|++.++++++++.+.|+. .++ +..+++++++.+++.+.|+++ .| +..++ .|.
T Consensus 291 ~~~~~~~~~~T~~g~p~~~aa~la~L~~-----------i~~-~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~ 357 (433)
T PRK00615 291 APEGTIFQAGTLSGNPLAMAAGKASINL-----------CRE-QGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGS 357 (433)
T ss_pred cCCCCcccCCCCcccHHHHHHHHHHHHH-----------Hhc-ccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-ece
Confidence 532 225677899999999888752 111 234455555555555554442 13 44455 555
Q ss_pred eEEecccCC-CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 448 MYLFPRIQL-PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 448 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
|+.+ .+.. +...+.............+. ..|.++||++.|... + . . =+|..+++++|+++++++++++++
T Consensus 358 ~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~~~-~--~---~-~ls~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 358 MFSF-FFNENRPNNLAEAQLSDIEAFQTFY-QSAFSKGVYLSPSPF-E--A---S-FLSSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred EEEE-EEeCCCCCChHHHhhCCHHHHHHHH-HHHHHCCeeecCccc-c--c---c-ceecCCCHHHHHHHHHHHHHHHHH
Confidence 4443 3321 11000000000000112344 445568999987431 1 1 1 267779999999999999999987
Q ss_pred HH
Q 009517 527 FM 528 (533)
Q Consensus 527 ~~ 528 (533)
+.
T Consensus 429 ~~ 430 (433)
T PRK00615 429 VF 430 (433)
T ss_pred Hh
Confidence 63
No 248
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=2.6e-20 Score=189.85 Aligned_cols=193 Identities=18% Similarity=0.253 Sum_probs=148.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
+.+..+++.+.+... .. + |..++++++++++.+.+| .+++++|+|+++|+.+++.++ + .+||+|+
T Consensus 10 ~~~e~~a~~~~~~~~----~~-~----~~g~~~~~~e~~la~~~g----~~~~v~~~sgt~aL~~~l~al~~-~pGd~Vi 75 (376)
T TIGR02379 10 TGQELEYIAEAISEG----KL-S----GDGPFSRRCETWLENRTG----TKKALLTPSCTAALEMAALLLDI-QPGDEVI 75 (376)
T ss_pred CHHHHHHHHHHHHcC----Cc-c----CCcHHHHHHHHHHHHHhC----CCeEEEeCCHHHHHHHHHHHcCC-CCcCEEE
Confidence 567788888877651 11 1 223456666666665544 568999999999999999887 5 7999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.++|..+...+...|++++.++++++ +|.+|++.+++++++ ++++|+ |+||+|...+ +++|.++|
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~la 142 (376)
T TIGR02379 76 MPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITH------RTKAIV---PVHYAGVACD---MDTIMALA 142 (376)
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHHH
Confidence 9999999999999999999999999864 688999999999976 789886 6678999887 78999999
Q ss_pred HHcCCEEEEcccccccc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecCC----ccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 300 KKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS----KGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S----K~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
++||++||+|++|+.+. |.+. +..+ ..+ +.+|| |.+. +|.+.|++++ .++++.+
T Consensus 143 ~~~~i~vIeDaa~~~g~~~~~~-~~g~-----------~~~-----~~~fSf~~~K~l~--~g~~gG~v~~--~~~~~~~ 201 (376)
T TIGR02379 143 NKHQLFVIEDAAQGVMSTYKGR-ALGS-----------IGH-----LGTFSFHETKNYT--SGGEGGALLI--NDQAFIE 201 (376)
T ss_pred HHCCCEEEEECccccCCccCCc-ccCC-----------CCC-----EEEEeCCCCCcCc--ccCCceEEEE--CCHHHHH
Confidence 99999999999998754 4432 2111 012 33444 8873 6888999887 3688988
Q ss_pred HHHHhhh
Q 009517 375 QIYKVAS 381 (533)
Q Consensus 375 ~l~~~~~ 381 (533)
.+..++.
T Consensus 202 ~~~~~~~ 208 (376)
T TIGR02379 202 RAEIIRE 208 (376)
T ss_pred HHHHHHH
Confidence 8887654
No 249
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=2e-20 Score=194.91 Aligned_cols=380 Identities=13% Similarity=0.034 Sum_probs=230.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 43 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGH~----~p~v~~Ai~~q~~~~ 90 (459)
T PRK06931 43 AIAKAQGVWVTDVEGNQ------YLDCLAGAGTL----------------------ALGHN----HPDVLQSIQDVLTSG 90 (459)
T ss_pred eEEeccccEEEeCCCCE------EEEcccchhhc----------------------cCCCC----CHHHHHHHHHHHhhh
Confidence 56778888778888888 77776554322 11122 688999999988752
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIA 233 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~ 233 (533)
.. . +.... ..+.+..+|+.+....+..... ..++++++|++|++.+++..+...| ++|+....+|++....+.
T Consensus 91 ~~---~-~~~~~-~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~al 165 (459)
T PRK06931 91 LP---L-HTLDL-TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGAL 165 (459)
T ss_pred cc---c-ccccc-CCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHH
Confidence 11 1 11101 2345555666665543211011 2346668999999999998763344 679999999999876555
Q ss_pred HhCC-------------eEEEEecCCCC--CCC----CCHHHHHHHHHHHHh----cCCCeeEEEEeCCCCCCcc-CCCH
Q 009517 234 LHGG-------------TLVPYYLDEAT--GWG----LETSEVKKQLEAAKA----KGITVRALVVINPGNPTGQ-VLAE 289 (533)
Q Consensus 234 ~~g~-------------~~~~v~~~~~~--~~~----ld~~~l~~~i~~~~~----~g~~~~~iil~~p~NPtG~-~~s~ 289 (533)
.... .+..+|..... .|+ -+.+.+++.+..... ...++.+||++..+.-.|+ .+++
T Consensus 166 s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~ 245 (459)
T PRK06931 166 AVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPV 245 (459)
T ss_pred hhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCH
Confidence 3321 12222221100 011 123444333332211 2235788888866655676 5678
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+.+++|.++|++||+++|+||++++|...|. +. ..+..++.|| +.+++|.++ .|+++|.+++ .
T Consensus 246 ~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~--~~-----a~~~~gv~PD-----ivt~gK~l~--gG~Pi~av~~---~ 308 (459)
T PRK06931 246 EWLQKIREVTQKHGILLIVDEVQAGFARTGK--MF-----AFEHAGIEPD-----IIVMSKAVG--GGLPLAVLGI---K 308 (459)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhcCCcCch--HH-----HhhhcCCCCC-----EEEeccccc--CCcceeeeee---H
Confidence 8899999999999999999999999866553 22 2222233788 667899995 4899998876 5
Q ss_pred HHHHHHHHHh-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecC
Q 009517 370 AEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKA 444 (533)
Q Consensus 370 ~~~~~~l~~~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~ 444 (533)
+++ +.+... ...|++.++++++++.+.|+. .+ .+.+.++.+++.++|.+.|+++ |.+..++.
T Consensus 309 ~~~-~~~~~~~~~~T~~gnpla~aaala~L~~-----------l~-~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG 375 (459)
T PRK06931 309 KEF-DAWQPGGHTGTFRGNQLAMATGLTTLKI-----------LK-EENLAQNAAERGEWLKAQLAELQKRYPCIGNVRG 375 (459)
T ss_pred HHH-hhccCCCCCCCCCCCHHHHHHHHHHHHH-----------HH-hCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEec
Confidence 553 554332 236789999999999988842 11 1234555666666666666554 44566777
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCC-C-hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTV-P-DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRL 520 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l 520 (533)
.|.|+.+ .+..+....+.......+ . ...+. ..+.++||++.++..+ .+.+|+.+. +++++|+++++++
T Consensus 376 ~Glm~gi-el~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gvl~~~~~~~-----~~~l~~~Ppl~it~~eid~~~~~l 448 (459)
T PRK06931 376 RGLMIGI-EIVDERQPADAMGSYPADGELAAAIQ-KACFENGLLLERGGRN-----GNVVRLLPPLLITQAECEEFIDRF 448 (459)
T ss_pred CceEEEE-EEccCcccccccccCCccHHHHHHHH-HHHHHCCcEEeecCCC-----CCEEEEECCCCcCHHHHHHHHHHH
Confidence 8776543 232110000000000000 0 12233 4455789999874322 237888885 8999999999999
Q ss_pred HHHHHHHHH
Q 009517 521 TDFHKNFMD 529 (533)
Q Consensus 521 ~~~l~~~~~ 529 (533)
+++++++.+
T Consensus 449 ~~~l~~~~~ 457 (459)
T PRK06931 449 EQALLAAVK 457 (459)
T ss_pred HHHHHHHHh
Confidence 999988655
No 250
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=2.1e-20 Score=190.97 Aligned_cols=215 Identities=14% Similarity=0.197 Sum_probs=156.5
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---HhCCeEEEEec
Q 009517 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYL 244 (533)
Q Consensus 168 G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~~g~~~~~v~~ 244 (533)
...+|++++|++++ .+++++++|+++|+..++..++ .+||+|+++.|+|..+...++ ..|+++..+
T Consensus 54 ~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll-~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~-- 122 (385)
T PRK08574 54 TLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLL-KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA-- 122 (385)
T ss_pred cHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEE--
Confidence 37899999999974 4578889999999999999888 799999999999998876664 347666554
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
.+|++.+++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... . .+
T Consensus 123 ------~~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~-~-~~-- 184 (385)
T PRK08574 123 ------YPSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL-Y-RP-- 184 (385)
T ss_pred ------CCCHHHHHHhcCcc-----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc-C-Ch--
Confidence 23688899888652 6899999999999999998 88999999999999999999954221 0 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe-eEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r-iG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~ 402 (533)
+ .. ..| +++.|++|.++| +|-. .|++++ .++++.+.+..... .+.+.+++..+.+...|+
T Consensus 185 -l-----~~---GaD---ivv~S~sK~l~g-~~d~~gG~vi~--~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~--- 246 (385)
T PRK08574 185 -L-----RH---GAD---FVVHSLTKYIAG-HNDVVGGVAVA--WSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK--- 246 (385)
T ss_pred -h-----hh---CCc---EEEeeCceeecC-CCCceeEEEEE--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---
Confidence 1 11 233 889999999843 5544 575665 36788887776554 444555665555554443
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+....++..++...+.+.|++.|.+.
T Consensus 247 -----------tL~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 247 -----------TLEVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 133344455556777888888775543
No 251
>PRK07480 putative aminotransferase; Validated
Probab=99.89 E-value=6.1e-21 Score=198.64 Aligned_cols=374 Identities=14% Similarity=0.114 Sum_probs=231.0
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 35 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~q~~~~ 82 (456)
T PRK07480 35 VITRAEGVYLWDSEGNK------ILDGMAGLWCV----------------------NVGYG----RKELADAAARQMREL 82 (456)
T ss_pred eEEeceeeEEEeCCCCE------EEEccchHHHh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 45666777666777777 77776553221 11111 588999999999873
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
.. ...+ .....+.+..+|+.+.+..+ ...++++++++|++|++.+++..+.. +| .+|+....+|++.
T Consensus 83 ~~--~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 156 (456)
T PRK07480 83 PY--YNTF--FKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGS 156 (456)
T ss_pred CC--cccc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 21 1111 01123444555666654432 23468999999999999999987521 33 4688888999986
Q ss_pred HHHHHHh-CCe------------EEEEecCC--CCCCCCC--------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 229 SASIALH-GGT------------LVPYYLDE--ATGWGLE--------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 229 ~~~~~~~-g~~------------~~~v~~~~--~~~~~ld--------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
....... |.. +..++... ...+..+ ++.+++.+... .+.++.+||++..+.-.|+
T Consensus 157 tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~ 234 (456)
T PRK07480 157 TVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGV 234 (456)
T ss_pred chhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCC
Confidence 5333222 111 11111100 0000111 24555444321 1236888888877766777
Q ss_pred -CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEE
Q 009517 286 -VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYM 363 (533)
Q Consensus 286 -~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v 363 (533)
.++.+.+++|.++|++||+++|+||++++|...|. ...+ +..++.|| +.+|+|.++ .| +++|.+
T Consensus 235 ~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~-----~~~gv~PD-----iv~~gK~l~--gG~~Pi~av 300 (456)
T PRK07480 235 IIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE--WFGS-----QHFGIKPD-----LMTIAKGLT--SGYIPMGAV 300 (456)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc--hhhh-----hhcCCCCC-----eeeeehhhc--cCCccceEE
Confidence 56777799999999999999999999999765553 2221 22233688 567899995 47 499999
Q ss_pred EEecCCHHHHHHHHH----h-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC-
Q 009517 364 EVTGFSAEVREQIYK----V-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL-ARRAKTLEDAFNSL- 436 (533)
Q Consensus 364 ~~~~~~~~~~~~l~~----~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~- 436 (533)
++ .+++++.+.. . ...|++.++++++++.+.|+. .++ +.+.++. +++.++|.+.|+++
T Consensus 301 ~~---~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~-----------l~~-~~l~~~~~~~~g~~l~~~l~~l~ 365 (456)
T PRK07480 301 GV---GDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRI-----------LRD-EGIVERVRDDTGPYLQKRLRELA 365 (456)
T ss_pred EE---cHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHH-----------HHh-CCHHHHHHHHHHHHHHHHHHHhh
Confidence 98 8999888731 1 236889999999999998841 111 2344455 35556666666553
Q ss_pred --CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC---hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CC
Q 009517 437 --EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP---DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQ 509 (533)
Q Consensus 437 --~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~ 509 (533)
+.+..++..|.|+.+ .+..+.. .+..... ....+...+.++||++.+. + +.+||++. ++
T Consensus 366 ~~~~i~~vrG~Glm~gi-e~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---~-----~~l~~~Ppl~it 431 (456)
T PRK07480 366 DHPLVGEVRGVGLVGAI-ELVKDKA-----TRERFEAGGGVGTICRDHCFANGLIMRAV---G-----DRMIISPPLVIT 431 (456)
T ss_pred cCCCeeeEEeecceEEE-EEecccc-----ccccCcchhhHHHHHHHHHHHCCcEEeec---C-----CEEEEECCCCCC
Confidence 445556777766554 2321100 0000001 1122334456789999751 1 27899996 69
Q ss_pred cCcHHHHHHHHHHHHHHHHHHhc
Q 009517 510 EDKIPAIVTRLTDFHKNFMDKFR 532 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~~~~~~ 532 (533)
+++|++++++|+++++++.++++
T Consensus 432 ~~eid~~~~~l~~al~~~~~~~~ 454 (456)
T PRK07480 432 HAEIDELVEKARKALDATAAELG 454 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999877653
No 252
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=1.3e-20 Score=196.61 Aligned_cols=365 Identities=11% Similarity=0.052 Sum_probs=233.3
Q ss_pred HHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCC
Q 009517 77 VSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (533)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~ 156 (533)
..++++...++.|+++ ++|+..|.... ..+++ ++++++++.+++.+..
T Consensus 33 i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~ql~~l~ 80 (466)
T PRK07030 33 IRRGEGVWLEDFEGKR------YLDAVSSWWVN----------------------VFGHA----NPRINQRIKDQVDQLE 80 (466)
T ss_pred EEeeeccEEEECCCCE------EEEcchhHHhh----------------------cCCCC----CHHHHHHHHHHHHhcC
Confidence 4556666666667777 88886664321 11111 6889999999998742
Q ss_pred CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcchH
Q 009517 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLYS 229 (533)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~~ 229 (533)
......| ..+.+..+|+.+..... ...+.|+++++|++|++.+++..+. .+| .+|+....+|++..
T Consensus 81 ~~~~~~~-----~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t 153 (466)
T PRK07030 81 HVILAGF-----SHEPVIELSERLVKITP--PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGET 153 (466)
T ss_pred Ccccccc-----CCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCccc
Confidence 1011112 22344445555554322 2346899999999999999998741 123 57999999999976
Q ss_pred HHHHHhCCe-------------EEEEecCCCC--CCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeC-CCCCCcc
Q 009517 230 ASIALHGGT-------------LVPYYLDEAT--GWGL--------ETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQ 285 (533)
Q Consensus 230 ~~~~~~g~~-------------~~~v~~~~~~--~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~-p~NPtG~ 285 (533)
..+...+.. +..+|..... .++. +++.+++.+... +.++.+||++. .+.-.|.
T Consensus 154 ~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~ 230 (466)
T PRK07030 154 LAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH---HDEIAAVIVEPLIQGAGGM 230 (466)
T ss_pred HHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEecccccCCCc
Confidence 544333211 1122211100 0111 245567767532 33788888886 4666676
Q ss_pred -CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEE
Q 009517 286 -VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYM 363 (533)
Q Consensus 286 -~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v 363 (533)
.++++.+++|.++|++||+++|+||++++|...|. +.. .+..++.|| +.+|+|.++ .| +++|.+
T Consensus 231 ~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~--~~a-----~~~~gv~PD-----iv~~gKgl~--gG~~Pi~av 296 (466)
T PRK07030 231 RMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT--MFA-----CEQAGIRPD-----FLCLSKALT--GGYLPLAAV 296 (466)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc--chH-----HHhcCCCCC-----EEeeehhcc--CCcccceEE
Confidence 66778899999999999999999999999866653 222 222334788 667899995 48 599999
Q ss_pred EEecCCHHHHHHHHH--------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 364 EVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 364 ~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
++ ++++++.+.. ....|++.++++++++.+.|+ ..+ .+.+.++.+++.++|.+.|++
T Consensus 297 ~~---~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~-----------~i~-~~~l~~~~~~~G~~l~~~L~~ 361 (466)
T PRK07030 297 LT---TDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLD-----------IFE-QDNVIENNRALARRMAEATAH 361 (466)
T ss_pred Ee---cHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH-----------HHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 98 9999888742 233678899999999999884 222 134556667777777777766
Q ss_pred C---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 436 L---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 436 ~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
+ |.+.-++..|.|..+ .+..+.. .+.+... ...++ ..+.++||++.+. + +.+|+.+.
T Consensus 362 l~~~~~v~~vrG~Gl~~gi-e~~~~~~-----~~~~~~~~~~~~~~i~-~~~~~~Gvl~~~~---g-----~~i~~~Ppl 426 (466)
T PRK07030 362 LADHPHVAEVRQTGMILAI-EMVQDKA-----SKTPYPWQERRGLKVY-QHALERGALLRPL---G-----SVVYFLPPY 426 (466)
T ss_pred HhcCCCEEEeEeceeEEEE-EeccCcc-----ccccCcchhHHHHHHH-HHHHHCCeEEEec---C-----CEEEEECCc
Confidence 4 445557777766443 2321100 0000000 12233 4455789999862 1 27898864
Q ss_pred -CCcCcHHHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~~~ 527 (533)
+++++|++++++++++++++
T Consensus 427 ~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 427 VITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999887
No 253
>PRK07483 hypothetical protein; Provisional
Probab=99.88 E-value=8.7e-21 Score=196.96 Aligned_cols=375 Identities=16% Similarity=0.116 Sum_probs=233.3
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.|+++ +||+..|.... ..+++ ++.+++++.+++.+.
T Consensus 15 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~av~~ql~~~ 62 (443)
T PRK07483 15 VAVAGEGIYLIDATGKR------YLDASGGAAVS----------------------CLGHS----HPRVIAAIHAQIDRL 62 (443)
T ss_pred eEEeceEEEEEeCCCCE------EEEcCccHhhh----------------------ccCCC----CHHHHHHHHHHHHhc
Confidence 45566676667777777 88886664322 11222 688999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
.......| ..+....+|+.+..... ...++++++++|++|++.+++..+.. +| .+|+....+|++.
T Consensus 63 ~~~~~~~~-----~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~ 135 (443)
T PRK07483 63 AYAHTSFF-----TTEPAEALADRLVAAAP--AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGN 135 (443)
T ss_pred cCcccccc-----CCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 21001111 12344456666654322 22468999999999999999987621 33 5689999999987
Q ss_pred HHHHHHhCC-e------------EEEEecCCCCCCCC-----C--------HHHHHHHHHHHHhcCCCeeEEEEeCCCC-
Q 009517 229 SASIALHGG-T------------LVPYYLDEATGWGL-----E--------TSEVKKQLEAAKAKGITVRALVVINPGN- 281 (533)
Q Consensus 229 ~~~~~~~g~-~------------~~~v~~~~~~~~~l-----d--------~~~l~~~i~~~~~~g~~~~~iil~~p~N- 281 (533)
......... . +..++... .|.. + ++.+++.+... ...++.+||++..+.
T Consensus 136 t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~ 211 (443)
T PRK07483 136 TLGALAIGGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGA 211 (443)
T ss_pred CHHHhhhcCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccC
Confidence 643333211 1 11121110 0110 0 24556555421 123678888886664
Q ss_pred CCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC-e
Q 009517 282 PTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-R 359 (533)
Q Consensus 282 PtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~-r 359 (533)
-.|. .++++.+++|.++|++||+++|+||++++|...|. +. ..+..++.|| +.+++|.++ .|+ +
T Consensus 212 ~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~--~~-----a~~~~gv~PD-----iv~~gK~l~--gG~~P 277 (443)
T PRK07483 212 TAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGT--LF-----ACEEDGVAPD-----LVTIAKGLG--AGYQP 277 (443)
T ss_pred cCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcH--HH-----HHhhcCCCCC-----eeeehhhhc--cCccc
Confidence 3454 66788899999999999999999999999866553 22 2222233788 667899995 486 9
Q ss_pred eEEEEEecCCHHHHHHHHHh-----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 360 GGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 360 iG~v~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+|.+++ .+++++.+... ...|++.++++++++.+.|+. .+ .+.+.++.+++.++|++.|+
T Consensus 278 i~av~~---~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~-----------i~-~~~l~~~~~~~g~~l~~~L~ 342 (443)
T PRK07483 278 IGAVLA---SDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRV-----------IA-EDGLLANVRARGEQLRARLR 342 (443)
T ss_pred cEEEEE---cHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHH-----------HH-hcCHHHHHHHHHHHHHHHHH
Confidence 999998 89998887532 236788999999999988841 11 13455666666677777775
Q ss_pred c----CCCceEecCCceeEEecccCCCHHHHHHHHhcCCC----ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 435 S----LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV----PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 435 ~----~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
+ .|.+.-++..|.|+.+ .+..+... ....+ ....++ +.+.++||++.+...-......+.+||.+
T Consensus 343 ~l~~~~~~i~~vRG~Glm~gi-e~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~Gll~~~~~~~~~~~~~~~l~~~P 415 (443)
T PRK07483 343 ERLGQHPHVGDIRGRGLFVGV-ELVADRAT-----KAPFDPALKLHARIK-REAMARGLMVYPMGGTIDGVRGDHVLLAP 415 (443)
T ss_pred HHHhcCCCeeeEeecccEEEE-EEeecccc-----cCCCCchhhHHHHHH-HHHHHCCcEEEecCccccCCCCCEEEEEC
Confidence 4 3445557777766543 22111000 00000 012233 44556899998742110001124899998
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 507 L--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
. +++++|++++++|+++++++..
T Consensus 416 pL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 416 PFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5 8999999999999999987654
No 254
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=1.1e-20 Score=196.90 Aligned_cols=369 Identities=12% Similarity=0.103 Sum_probs=231.0
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
..+.++++...++.||++ +||+..+....+ ... ++++++++.+++.+
T Consensus 56 ~~i~~a~G~~l~D~dG~~------ylD~~g~~~~~l---------------------Gh~------~p~v~~Ai~~ql~~ 102 (459)
T PRK06082 56 DVLASAEGIYIEDVDGKK------YMDFHGNNVHQL---------------------GYG------HPHVIEKVKEQMAK 102 (459)
T ss_pred ceEEeeeeeEEEECCCCE------EEEcccHhhccc---------------------CCC------CHHHHHHHHHHHHh
Confidence 355667776666667777 777752212111 111 68999999999986
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHH
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIA 233 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~ 233 (533)
... ....| ..+....+++.+.+..+ ...+.+++++++++|++.+++.++...| .+|+....+|++......
T Consensus 103 ~~~-~~~~~-----~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~ 174 (459)
T PRK06082 103 LPF-SPRRF-----TNETAIECAEKLTEIAG--GELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAI 174 (459)
T ss_pred CCC-ccCcc-----CCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHH
Confidence 321 11112 23444555555554432 2246899999999999999998753234 689999999998764333
Q ss_pred Hh-CCe------------EEEEecCCCC--CCC-CC------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 234 LH-GGT------------LVPYYLDEAT--GWG-LE------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 234 ~~-g~~------------~~~v~~~~~~--~~~-ld------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
.. |.. +..+|..... .|. .| ++.+++.++. ..++.+||++..++..+.+++++.
T Consensus 175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~y 250 (459)
T PRK06082 175 SVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAY 250 (459)
T ss_pred hhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHH
Confidence 22 211 1112211000 011 01 2446666653 126778887766665566788899
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSA 370 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~ 370 (533)
+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|+|.++ .| +++|.+++ .+
T Consensus 251 l~~lr~lc~~~g~llI~DEV~tG~GRtG~--~fa-----~e~~gv~PD-----iv~~gKgl~--gG~~P~~av~~---~~ 313 (459)
T PRK06082 251 WKRVREICDKHNVLLIIDEIPNGMGRTGE--WFT-----HQAYGIEPD-----ILCIGKGLG--GGLVPIAAMIT---KD 313 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCccch--hhH-----hHhhCCCCC-----EEEeccccc--CCCCcceEEEE---cH
Confidence 99999999999999999999999765553 111 122233688 445899995 47 59999998 77
Q ss_pred HHHHHHHHh-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEecCC
Q 009517 371 EVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNKAE 445 (533)
Q Consensus 371 ~~~~~l~~~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~ 445 (533)
++....... ...|++.++++++++.+.|+ ..++ +.+.++.+++.++|.+.|+++ +.+.-++..
T Consensus 314 ~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~-----------~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~ 381 (459)
T PRK06082 314 KYNTAAQISLGHYTHEKSPLGCAAALATIE-----------VIEQ-EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGI 381 (459)
T ss_pred HHHhhccCCCCCCCCCcCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeec
Confidence 776543211 12578899999999988874 2221 345666777777777777664 445567777
Q ss_pred ceeEEecccCCCHHHHHHHHhcCC-CChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHH
Q 009517 446 GAMYLFPRIQLPEKAIKAAEAEKT-VPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
|.|+.+ .+..+... .... .....++ ..+.++||++.+. +.+.+|+++. +++++|+++++++++
T Consensus 382 Gl~~~v-e~~~~~~~-----~~~~~~~~~~~~-~~~~~~Gvl~~~~-------~~~~i~~~Ppl~it~~eid~~~~~l~~ 447 (459)
T PRK06082 382 GLLWGV-ELVTDRHT-----KERAYDEAEAVL-YRCLNNGLSFKVS-------QGNVIQLSPPLIITREELTQALAILEE 447 (459)
T ss_pred cceeEE-EEccCccc-----cCccHHHHHHHH-HHHHhCCCEEEec-------CCCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 776543 23211000 0000 0012233 3445789999862 1238999985 799999999999999
Q ss_pred HHHHHHHHh
Q 009517 523 FHKNFMDKF 531 (533)
Q Consensus 523 ~l~~~~~~~ 531 (533)
++.++.+.+
T Consensus 448 ~l~~~~~~~ 456 (459)
T PRK06082 448 AIAKICQDF 456 (459)
T ss_pred HHHHHhhhc
Confidence 999886653
No 255
>PRK07481 hypothetical protein; Provisional
Probab=99.88 E-value=3.2e-20 Score=193.23 Aligned_cols=369 Identities=14% Similarity=0.118 Sum_probs=230.8
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 27 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~ql~~~ 74 (449)
T PRK07481 27 IIVRGDGVYVYDIDGKK------LLDGVGGLWNV----------------------NVGHN----REEVKEAIVRQLDEL 74 (449)
T ss_pred eEEeccccEEEeCCCCE------EEECchhHHhh----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 55667777777778877 77776553221 11111 588999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
.. ...+. .-..+.+..+|+.+.+..+ +-..++++++++|++|++.+++.++.. +| .+|+....+|++.
T Consensus 75 ~~--~~~~~--~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 149 (449)
T PRK07481 75 EY--YSTFD--GTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGT 149 (449)
T ss_pred cc--eeccc--ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 21 11110 0022344445555554332 112468999999999999999987521 23 5799999999997
Q ss_pred HHHHHHhCCe-------------EEEEecCCC--CCCC-CCHHHHH--------HHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 229 SASIALHGGT-------------LVPYYLDEA--TGWG-LETSEVK--------KQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 229 ~~~~~~~g~~-------------~~~v~~~~~--~~~~-ld~~~l~--------~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
.......+.. +..++.... ..|. -|++.++ +.|.. ..+.++.+|+++..+.-.|
T Consensus 150 t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~--~~~~~iAAviiEPvqg~gG 227 (449)
T PRK07481 150 HFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAF--QGPDTIAAFIAEPVQGAGG 227 (449)
T ss_pred chhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHh--cCCCcEEEEEEecccCCcC
Confidence 6533332211 111211100 0111 2444443 33321 1123688888887776677
Q ss_pred c-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 Q-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
. .++++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+++|.++ .| +++|.
T Consensus 228 ~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a-----~~~~gv~PD-----iv~~gKgl~--gG~~Pi~a 293 (449)
T PRK07481 228 VIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS--WFG-----SRGWGVKPD-----IMCLAKGIT--SGYVPLGA 293 (449)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch--hhH-----hhhcCCCCC-----EEEEeeccc--CCCcCceE
Confidence 7 56778899999999999999999999999766553 111 222233688 567899995 47 59999
Q ss_pred EEEecCCHHHHHHHHH--------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ .+++++.+.. ....|++.++++++++.+.|+. .+ .+.+.++.+++.++|.+.|+
T Consensus 294 v~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~-----------l~-~~~l~~~~~~~g~~l~~~L~ 358 (449)
T PRK07481 294 TMV---NARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDI-----------VV-REDLPANAAKRGAYLLEGLQ 358 (449)
T ss_pred EEE---cHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHH-----------HH-hhhHHHHHHHHHHHHHHHHH
Confidence 998 8999888753 1236788999999999988741 11 13455666677777777776
Q ss_pred cC----CCceEecCCceeEEecccCCCHHHHHHHHhcCCC----ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 435 SL----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV----PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 435 ~~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
++ +-+..++..|.|+.+ .+..+... +...+ ....+ ...+.++||++.+. +. .+||++
T Consensus 359 ~l~~~~~~i~~vrG~Glm~gi-~l~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~Gvl~~~~-------g~-~i~l~P 423 (449)
T PRK07481 359 PLKERFELVGDVRGKGLMLAL-DLVADKAT-----REPIDPSKGYANAV-ADVARENGVLVRPS-------GT-KIILSP 423 (449)
T ss_pred HHhhcCCCeEEEeecceEEEE-Eecccccc-----cCCCCchhHHHHHH-HHHHHhCCeEEEec-------CC-EEEEEC
Confidence 64 334556777765543 23211000 00000 01223 34456789999862 11 589997
Q ss_pred c--CCcCcHHHHHHHHHHHHHHH
Q 009517 507 L--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
. +++++|++++++|+++++++
T Consensus 424 pl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 424 PLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhc
Confidence 5 79999999999999999765
No 256
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.88 E-value=1.4e-20 Score=195.31 Aligned_cols=365 Identities=15% Similarity=0.102 Sum_probs=227.8
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.|+++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 31 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~ql~~l 78 (442)
T PRK13360 31 LLVAAKGMYYTTHDGRR------VLDGTAGLWCV----------------------NAGHG----RPEIVEAVRAQAGEL 78 (442)
T ss_pred eEEeeeeeEEEeCCCCE------EEECchhHHHh----------------------ccCCC----CHHHHHHHHHHHHhC
Confidence 55667777667777777 77776553221 11111 688999999999863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C-CCeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E-NDGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~-gd~Vlv~~p~~~~~ 228 (533)
.. ...+. -..+....+|+.+.+... ...+.|+++++|++|++.+++..+.. + ..+|+....+|++.
T Consensus 79 ~~--~~~~~---~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 151 (442)
T PRK13360 79 DY--APAFQ---MGHPKAFELANRIAEIAP--GGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGV 151 (442)
T ss_pred CC--cccCC---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCc
Confidence 21 11111 112334455555554321 12468999999999999999987521 2 25799999999997
Q ss_pred HHHHHHh-CC------------eEEEEecCC---CCCCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 229 SASIALH-GG------------TLVPYYLDE---ATGWGL--------ETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 229 ~~~~~~~-g~------------~~~~v~~~~---~~~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
....... |. .+..+|... ...|.. ..+.+++.++.. ...++.+|+++..+...|
T Consensus 152 t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G 229 (442)
T PRK13360 152 GFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTG 229 (442)
T ss_pred cHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCC
Confidence 5432221 11 112223221 001111 145677777532 123677787777677778
Q ss_pred cC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 QV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
.+ ++++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|+|.++ .| +++|.
T Consensus 230 ~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~--~~a-----~~~~gv~PD-----ivt~gK~l~--gG~~P~ga 295 (442)
T PRK13360 230 VLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--PFA-----AQYFGVTPD-----LLTCAKGLT--NGAIPMGA 295 (442)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chh-----hhhcCCCCc-----eeeeeeccc--cCccceEE
Confidence 75 6778899999999999999999999999765553 111 122223677 558999994 36 79999
Q ss_pred EEEecCCHHHHHHHHHh--------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ ++++++.+... ...+++.++++++++.+.|+ ..++ +.+.++.+++.+++++.|+
T Consensus 296 v~~---~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~-----------~l~~-~~l~~~~~~~g~~l~~~l~ 360 (442)
T PRK13360 296 VFV---SSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLD-----------LYER-EGLLTRAARLAPYWEDALH 360 (442)
T ss_pred EEE---cHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHHHHHHHHHHH
Confidence 988 89998877531 23578889999999988874 2221 2455666777777777777
Q ss_pred cC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CC
Q 009517 435 SL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQ 509 (533)
Q Consensus 435 ~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~ 509 (533)
++ +.+.-++..|.+.. +.+..... ........++. .+.++||++.++ + +.+||++. ++
T Consensus 361 ~l~~~~~v~~vrG~Gl~~~-~~l~~~~~-------~~~~~~~~~~~-~l~~~Gvl~~~~-------~-~~lr~~Ppl~~t 423 (442)
T PRK13360 361 SLRDAPHVIDIRNLGLVGA-VELAPRDG-------KPGKRAYEVFL-KCFEKGLMIRYT-------G-DILALSPPLIIE 423 (442)
T ss_pred HhhcCCCeeeeeccceEEE-EEEecCCC-------CcchhHHHHHH-HHHHCCcEEEec-------C-CEEEEeCCCccC
Confidence 64 33444555665432 22211000 00001123333 455689999752 1 27999974 89
Q ss_pred cCcHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~ 527 (533)
+++|++++++|+++++++
T Consensus 424 ~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 424 EAQIDELFDILAQALKET 441 (442)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 257
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=1.4e-20 Score=196.17 Aligned_cols=370 Identities=12% Similarity=0.057 Sum_probs=231.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
.+.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 49 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~i~~Ai~~q~~~l 96 (472)
T PRK08742 49 PIARGEGAWLVGHDGRR------YLDAVSSWWTN----------------------LFGHA----EPRIGAAIAAQAGEL 96 (472)
T ss_pred eEEecccCEEEeCCCCE------EEEcCccHHhc----------------------cCCCC----CHHHHHHHHHHHHhC
Confidence 35677777777777777 77876553221 11111 588999999998753
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCC---CCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcC
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQY 225 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~---~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~ 225 (533)
.......+. .+.+..+++.+....... ...+.|+++++|++|++.+++..+.. +| .+|+....+|
T Consensus 97 ~~~~~~~~~-----~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~sy 171 (472)
T PRK08742 97 EQVMLAGFT-----HEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGY 171 (472)
T ss_pred CCccccccC-----CHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCc
Confidence 210111122 233455666665432210 12468999999999999999988521 22 6799999999
Q ss_pred cchHHHHHHhCCe-------------EEEEecCCCC--CCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeC-CCC
Q 009517 226 PLYSASIALHGGT-------------LVPYYLDEAT--GWGL--------ETSEVKKQLEAAKAKGITVRALVVIN-PGN 281 (533)
Q Consensus 226 ~~~~~~~~~~g~~-------------~~~v~~~~~~--~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~-p~N 281 (533)
++....+...+.. +..+|..... .++. +++.+++.+... +.++.+||++. .++
T Consensus 172 HG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~iAAvI~EPviqg 248 (472)
T PRK08742 172 HGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS---PGEICALILEPRLQC 248 (472)
T ss_pred CCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEcccccc
Confidence 9976544433211 1122221100 0111 245666666531 23788888876 466
Q ss_pred CCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC-e
Q 009517 282 PTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-R 359 (533)
Q Consensus 282 PtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~-r 359 (533)
-.|. .++++.+++|.++|++||+++|+||++++|...|. +..+ +..++.|| +.+++|.++ .|+ +
T Consensus 249 ~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~--~~a~-----e~~gv~PD-----iv~~gKgl~--gG~~P 314 (472)
T PRK08742 249 AGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGT--LFAC-----EQAGVMPD-----LLCLSKGLT--GGFLP 314 (472)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chHH-----HhcCCCCC-----EEEEccccc--CCCCC
Confidence 6776 66788899999999999999999999999876663 2222 22233788 667899995 484 9
Q ss_pred eEEEEEecCCHHHHHHHHH-------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 360 GGYMEVTGFSAEVREQIYK-------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDA 432 (533)
Q Consensus 360 iG~v~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 432 (533)
+|.+++ ++++++.+.. ....|++.++++++++.+.|+- .++ +.+.++.+++.+++.+.
T Consensus 315 laav~~---~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~-----------i~~-~~l~~~~~~~g~~l~~~ 379 (472)
T PRK08742 315 LSAVLA---TQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDI-----------FAD-DDVIARNQPTAARMTQL 379 (472)
T ss_pred cceeec---cHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHH-----------HHH-CCHHHHHHHHHHHHHHH
Confidence 999998 9999887742 1236788999999999988852 111 22334444444444444
Q ss_pred H---hcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCCh---HHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 433 F---NSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPD---AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 433 L---~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
+ .+.+.+.-++..|.|+.+- +..+.. .+.....+ ...+.+.+.++||++.+. | +.|||.+
T Consensus 380 ~~~~~~~~~i~dvRG~Gl~~gie-l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------g-~vi~~~P 445 (472)
T PRK08742 380 AAQIGEHPHVADVRQAGMVVAFE-LTRGGN-----KRTPFPPAARVGLHAYRAALARGVVLRPL-------G-DVLYWMP 445 (472)
T ss_pred HHHHhcCCCeeeEeccceEEEEE-eccCcc-----ccccCCchhHHHHHHHHHHHHCCeEEEec-------C-CEEEEEC
Confidence 3 3345566678888765542 221100 00000001 112234455789999862 1 2899999
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHH
Q 009517 507 L--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
. +++++|++++++|+++++++.
T Consensus 446 pL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 446 PYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 5 899999999999999998753
No 258
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=3e-20 Score=190.18 Aligned_cols=193 Identities=13% Similarity=0.168 Sum_probs=149.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
.++.++++.+.+.. ....+++ ...+|++++|++++ .++++.++|+++|+.+++.++ + ++||+|+
T Consensus 13 ~~~e~~~~~~~l~~----~~~~~g~--~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~-~~Gd~Vi 77 (379)
T PRK11658 13 GDEELAAVKEVLRS----GWITTGP--KNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGI-GPGDEVI 77 (379)
T ss_pred CHHHHHHHHHHHHc----CCccCCH--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCC-CCCCEEE
Confidence 56778888887765 2332333 37899999999985 246888999999999999998 6 7999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|..+...+...|++++.++++.+ +|.+|++.+++++++ ++++|+ |+||+|...+ +++|.++|
T Consensus 78 v~~~~~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a 144 (379)
T PRK11658 78 TPSLTWVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIG 144 (379)
T ss_pred ECCCcHHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHH
Confidence 9999999999999999999999998754 678999999999976 789887 5567999877 88999999
Q ss_pred HHcCCEEEEccccc-cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH
Q 009517 300 KKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (533)
Q Consensus 300 ~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~ 378 (533)
+++|+++|+|++|+ +..+.+. . + ...+ +.+.||++.- .+++.+.|+++. .++++.+.++.
T Consensus 145 ~~~gi~vi~D~a~a~g~~~~~~-~----------~---g~~g--~~~~Sf~~~K-~l~~g~GG~v~~--~~~~~~~~~~~ 205 (379)
T PRK11658 145 ERYGIPVIEDAAHAVGTYYKGR-H----------I---GARG--TAIFSFHAIK-NITCAEGGLVVT--DDDELADRLRS 205 (379)
T ss_pred HHcCCeEEEECCCccCCeECCe-e----------c---CCCC--CEEEeCCCCC-cCcccCceEEEE--CCHHHHHHHHH
Confidence 99999999999997 3344331 1 0 0111 1256777544 456778998886 35888888776
Q ss_pred hh
Q 009517 379 VA 380 (533)
Q Consensus 379 ~~ 380 (533)
+.
T Consensus 206 ~~ 207 (379)
T PRK11658 206 LK 207 (379)
T ss_pred HH
Confidence 54
No 259
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.88 E-value=2.2e-20 Score=193.23 Aligned_cols=162 Identities=18% Similarity=0.172 Sum_probs=129.4
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch----HHHHHHhC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~----~~~~~~~g 236 (533)
..|+.+. ..+|++.+|++++ .+..+++++|++|+..++..++ .+||+|+++.+.|++. ...+...|
T Consensus 52 sr~~~p~-~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 52 SRLMNPT-TDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLA-QAGDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred ECCCChh-HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 3344433 6788899988864 3568899999999999999888 7999999999988653 34456789
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
++++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 122 ~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~ 185 (418)
T TIGR01326 122 IEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPY 185 (418)
T ss_pred cEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhh
Confidence 999888742 78999999976 7999999999999999987 8899999999999999999996421
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+ . .+ + . .+..|++.|+||.+ +.+|+|+||+++
T Consensus 186 ~-~----~~---l--~------~g~Divv~S~sK~l-~g~G~~lGg~v~ 217 (418)
T TIGR01326 186 L-C----RP---I--D------HGADIVVHSATKYI-GGHGTAIGGVIV 217 (418)
T ss_pred c-C----Cc---h--h------cCCeEEEECccccc-cCCccceEEEEE
Confidence 1 1 01 1 1 11348899999999 678999999988
No 260
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=2.1e-20 Score=195.02 Aligned_cols=367 Identities=12% Similarity=0.101 Sum_probs=234.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 41 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~ql~~l 88 (460)
T PRK06916 41 IIERGEGRKLYDVNGNE------YYDGVSSIWLN----------------------VHGHQ----VPELDEAIREQLNKI 88 (460)
T ss_pred eEEeccccEEEeCCCCE------EEEcchhHHHh----------------------hcCCC----CHHHHHHHHHHHHhC
Confidence 56777777777778877 77775553221 11111 688999999999874
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
...... +.. .+.+..+|+.+.+... ...+.++++++|++|++.+++..+. .+| .+|+....+|++.
T Consensus 89 ~~~~~~-~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~ 161 (460)
T PRK06916 89 AHSTLL-GLA----NVPSILLAEKLIEVVP--EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGD 161 (460)
T ss_pred CCcccc-ccC----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcc
Confidence 210111 111 2333445555544322 2236899999999999999998762 133 6899999999996
Q ss_pred HHHHHHhCCe-------------EEEEecCCC--CCCC--------CCHHHHHHHHHHHHhcCCCeeEEEEeC-CCCCCc
Q 009517 229 SASIALHGGT-------------LVPYYLDEA--TGWG--------LETSEVKKQLEAAKAKGITVRALVVIN-PGNPTG 284 (533)
Q Consensus 229 ~~~~~~~g~~-------------~~~v~~~~~--~~~~--------ld~~~l~~~i~~~~~~g~~~~~iil~~-p~NPtG 284 (533)
...+...+.. +..+|.... ..++ -+++.+++.++.. +.++.+||++. .+.-.|
T Consensus 162 t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG 238 (460)
T PRK06916 162 TIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK---HEEIAAIIVEPLVQGAGG 238 (460)
T ss_pred cHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC---CCcEEEEEEeccccCCCC
Confidence 6544332211 122221100 0011 1345666666532 34788888887 576677
Q ss_pred cC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 QV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
++ ++++.|++|.++|++||+++|+||++++|...|. .. ..+..++.|| +.+++|.++ .| +++|.
T Consensus 239 ~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~--~~-----a~~~~gv~PD-----iv~~gK~l~--gG~~Pi~a 304 (460)
T PRK06916 239 MITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGK--MF-----ACEHENVTPD-----IMTAGKGLT--GGYLPIAI 304 (460)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCch--hh-----HHHhcCCCCC-----eeeeehhhh--cCccccce
Confidence 64 6888899999999999999999999999765553 11 2222233688 557899995 48 59999
Q ss_pred EEEecCCHHHHHHHHH--------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ .+++++.+.. ....|++.++++++++.+.|+ ..++ +.+.++.+++.+++++.|+
T Consensus 305 v~~---~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~-----------~l~~-~~l~~~~~~~g~~l~~~l~ 369 (460)
T PRK06916 305 TVT---TDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLE-----------LYEK-TNLIEQVARKTEYVATQLE 369 (460)
T ss_pred eee---cHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHH
Confidence 998 8999887642 123578889999999988874 1111 3455667777777777777
Q ss_pred cC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 435 SL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 435 ~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
++ +.+.-++..|.|+.+ .+..+... +..... ...++ ..+.++||++.|. + +.+|+.+.
T Consensus 370 ~l~~~~~v~~vrG~Glm~gi-el~~~~~~-----~~~~~~~~~~~~~i~-~~~~~~Gvl~~~~-------g-~~l~~~Pp 434 (460)
T PRK06916 370 DLFALKHVGDIRQLGLMVGI-ELVKNKET-----KEPFEWTERVGVQVC-KRSRELGMLTRPL-------G-NTIVFMPP 434 (460)
T ss_pred HhhcCCCeEEeecCCceeeE-Eeeccccc-----ccCCCchhhHHHHHH-HHHHHCCeEEEec-------C-CEEEEeCC
Confidence 65 445557777766543 22211100 000000 12333 4456789999862 1 27888864
Q ss_pred --CCcCcHHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+++++|++++++|+++++++.
T Consensus 435 l~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 435 LASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred cccCHHHHHHHHHHHHHHHHhhc
Confidence 899999999999999998754
No 261
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.88 E-value=7.5e-20 Score=186.00 Aligned_cols=213 Identities=13% Similarity=0.116 Sum_probs=156.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~v~~ 244 (533)
...|++++|++.+ .+++++++|+++|+..++..++ ++||+|++++|.|+..... +...|.++..++.
T Consensus 52 ~~~lE~~lA~l~g--------~~~~~~~~sG~~Ai~~al~all-~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 52 HFALQDAMCELEG--------GAGCYLYPSGLAAVTNSILAFV-KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECcHHHHHHHHHHHhc-CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 4689999998864 4689999999999999999998 8999999999999876543 3456887776643
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
. +.+.+++++++ ++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|..... .. +
T Consensus 123 ~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~-~~-p-- 182 (377)
T TIGR01324 123 L-------IGEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLL-FK-P-- 182 (377)
T ss_pred C-------CHHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccc-cC-c--
Confidence 2 23788888876 7999999999999988765 99999999999999999999975322 11 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~ 403 (533)
+ ++ ..| |++.|++|.++|..+...|++++ +++.++.+..... ...+.++.....+...+
T Consensus 183 ----l--~~---gaD---ivv~S~tK~l~G~~d~~gG~v~~---~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl----- 242 (377)
T TIGR01324 183 ----L--EH---GVD---ISIQAGTKYLVGHSDIMIGTVVA---NARTWDQLREHSYLMGQMVDADDAYTTLRGL----- 242 (377)
T ss_pred ----c--cc---Cce---EEEecCceeccCCCCceEEEEEe---CHHHHHHHHHHHHHhCCCCCHHHHHHHHhhh-----
Confidence 0 11 233 88999999997666688998887 7777776664333 33445565555444443
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
+.+....++..++...+.+.|++.|.+
T Consensus 243 ---------~tl~~R~~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 243 ---------RTLGVRLKQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred ---------hhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 233444555666666788888776543
No 262
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=4.4e-20 Score=189.16 Aligned_cols=212 Identities=17% Similarity=0.187 Sum_probs=150.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH----HHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~ 244 (533)
..+|++.+|++.+ .+ +.+++ ++|+.++..++. ++ .+||+|+++.|.|++.. ..+...|++++.++.
T Consensus 56 ~~~le~~lA~l~g------~~-~~v~~-~sG~~ai~~~l~-~l-~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 56 REALEDIIAELEG------GT-KGFAF-ASGMAAISTAFL-LL-SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred HHHHHHHHHHHhC------CC-CeEEE-CCHHHHHHHHHH-Hh-CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 6788999998875 22 34555 445678888886 55 68999999999998533 445568999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
. |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .+
T Consensus 126 ~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~--~~-- 185 (390)
T PRK08064 126 T-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ--KP-- 185 (390)
T ss_pred C-------CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc--Cc--
Confidence 3 68999998876 7999999999999999987 889999999999999999999763321 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~ 403 (533)
+ ++ ..| +++.|++|.++|.+|...|++++ .++++++.+..... .....++..+..+..-+
T Consensus 186 -~-----~~---g~D---ivv~S~tK~~~G~~~~laG~~v~--~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl----- 246 (390)
T PRK08064 186 -L-----DL---GAD---VVLHSATKFLAGHSDVLAGLAVV--KDEELAQKLYFLQNSFGAVLGVQDCWLVLRGL----- 246 (390)
T ss_pred -h-----hh---CCc---EEEeecceeccCCccceeEEEEe--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHccc-----
Confidence 1 11 123 78999999986656677787776 36788888887765 23333444444332222
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLEG 438 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 438 (533)
+.+....++..+++..+.+.|++.|.
T Consensus 247 ---------~tl~~R~~~~~~~a~~la~~L~~~~~ 272 (390)
T PRK08064 247 ---------KTLHVRLEHSSETANKIALYLQEHPK 272 (390)
T ss_pred ---------CcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 22334445556667777788877643
No 263
>PRK06105 aminotransferase; Provisional
Probab=99.88 E-value=1.5e-20 Score=196.10 Aligned_cols=371 Identities=13% Similarity=0.068 Sum_probs=234.6
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 33 ~~~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~i~~Ai~~q~~~~ 80 (460)
T PRK06105 33 VIERGEGIYVYDDAGKR------YIEGMAGLWSV----------------------ALGFS----EQRLVEAAARQMKKL 80 (460)
T ss_pred eEEeeeEEEEEECCCCE------EEEcchhHHhc----------------------cCCCC----CHHHHHHHHHHHHhC
Confidence 55667777777777777 88876664332 11222 689999999999873
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
.. ...+ .....+.+.++++.+.+... ...++|+++++|++|++.+++.+.. .+| .+|+....+|++.
T Consensus 81 ~~--~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~ 154 (460)
T PRK06105 81 PF--YHTF--SHKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGV 154 (460)
T ss_pred CC--eecc--cccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCc
Confidence 21 1111 11123444445565554432 2346899999999999999998631 123 5788889999987
Q ss_pred HHHHHHh-CCe------------EEEEecCCCCCCC-----------CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 229 SASIALH-GGT------------LVPYYLDEATGWG-----------LETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 229 ~~~~~~~-g~~------------~~~v~~~~~~~~~-----------ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
....... +.. +..++......+. ...+++++.+... ...++.+||++..+.-.|
T Consensus 155 t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG 232 (460)
T PRK06105 155 TIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGG 232 (460)
T ss_pred chhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCC
Confidence 6433222 111 1111111000000 0135667666432 113678888887776667
Q ss_pred cC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 QV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
.. ++++.+++|.++|++||+++|+||++++|...|. ...+ +..++.|| +.+|+|.++ .| +++|+
T Consensus 233 ~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~--~f~~-----~~~~v~PD-----i~~~gK~lg--gG~~P~~a 298 (460)
T PRK06105 233 VIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN--MFGC-----ETFGIKPD-----ILVMSKQLS--SSYQPLSA 298 (460)
T ss_pred CccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch--hhhH-----HhcCCCCC-----eeeeecccc--cCcccceE
Confidence 64 6888899999999999999999999999866553 2221 22233688 668999994 36 69999
Q ss_pred EEEecCCHHHHHHHHHh--------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ ++++++.+... ...|++.++++++++.+.|+ ..++ +.+.+..+++.++|.+.|+
T Consensus 299 v~~---~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~-----------~i~~-~~l~~~v~~~g~~l~~~L~ 363 (460)
T PRK06105 299 VLM---NEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLA-----------IIEE-RDLVGNAAERGARLQARLR 363 (460)
T ss_pred EEE---cHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHH
Confidence 998 89998877531 23678899999999988874 2221 3455666777777777776
Q ss_pred cC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 435 SL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 435 ~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
++ |.+.-++..|.|+.+ .+..+.. .+.+... ...+ ...+.++||++.|. + +.+||++.
T Consensus 364 ~l~~~~~v~~vrG~Gl~~gi-e~~~~~~-----~~~~~~~~~~~a~~i-~~~~~~~Gvl~~~~---g-----~~i~l~Pp 428 (460)
T PRK06105 364 ALADHPLVGEVRGVGLIAAV-ELVADKA-----TKTPFEPPGKVGARA-NAAAHEHGVISRAM---G-----DTLAFCPP 428 (460)
T ss_pred HhhcCCCeEEEEecceEEEE-EEecCcc-----cCCCCCchhHHHHHH-HHHHHHCCeEEEec---C-----CEEEEECC
Confidence 64 445556777765443 2221100 0000000 1223 34456789999862 1 27899985
Q ss_pred --CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++++|+++++++.++++++.+.
T Consensus 429 l~it~~eid~~~~~l~~~l~~~~~~ 453 (460)
T PRK06105 429 LIITAAQVDEMVDRFGRALDDVAAW 453 (460)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999987653
No 264
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.88 E-value=3.4e-20 Score=191.34 Aligned_cols=357 Identities=13% Similarity=0.080 Sum_probs=228.1
Q ss_pred HHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCC
Q 009517 77 VSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (533)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~ 156 (533)
..++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+..
T Consensus 29 i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~i~~Ai~~q~~~~~ 76 (428)
T PRK07986 29 VVSAEGCELILADGRR------LVDGMSSWWAA----------------------IHGYN----HPQLNAAMKSQIDAMS 76 (428)
T ss_pred EEeeeeeEEEeCCCCE------EEEcchhHHhh----------------------cCCCC----CHHHHHHHHHHHhhcC
Confidence 3456666666667777 88887664322 11111 6889999999998642
Q ss_pred CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-----C-CCeEEEcCCcCcchHH
Q 009517 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----E-NDGILCPIPQYPLYSA 230 (533)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----~-gd~Vlv~~p~~~~~~~ 230 (533)
.. ...+. ..+.+..+|+.+.+..+ ...+.++++++|++|++.+++..+.. . ..+|+....+|++...
T Consensus 77 ~~-~~~~~----~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~ 149 (428)
T PRK07986 77 HV-MFGGI----THPPAIELCRKLVAMTP--QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTF 149 (428)
T ss_pred Cc-ccccc----CCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcH
Confidence 10 01011 22344555666654332 23468999999999999999987621 2 3679999999998654
Q ss_pred HHHHh-CCe-------------EEEEecCCCC---CC-CCCHHHHHHHHHHHHhcCCCeeEEEEeCC-CCCCcc-CCCHH
Q 009517 231 SIALH-GGT-------------LVPYYLDEAT---GW-GLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQ-VLAEE 290 (533)
Q Consensus 231 ~~~~~-g~~-------------~~~v~~~~~~---~~-~ld~~~l~~~i~~~~~~g~~~~~iil~~p-~NPtG~-~~s~~ 290 (533)
.+... +.. +..++..... .| .-|++++++.++.. +.++.+|+++.. +.-.|+ .++++
T Consensus 150 ~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~ 226 (428)
T PRK07986 150 GAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPE 226 (428)
T ss_pred hhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHH
Confidence 33322 211 1112211000 01 11566777777642 236777777763 655675 55778
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCC
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFS 369 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~ 369 (533)
.+++|.++|++||+++|+||++.+|...|. ... .+..++.|| +.+|+|.++ .| +++|.+++ +
T Consensus 227 ~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~--~fa-----~~~~gv~PD-----i~t~gK~l~--gG~~p~~av~~---~ 289 (428)
T PRK07986 227 WLKRVRKLCDREGILLIADEIATGFGRTGK--LFA-----CEHAGIAPD-----ILCLGKALT--GGTMTLSATLT---T 289 (428)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCccCCC--eee-----ecccCCCCC-----EEEechhhh--CCcccCcchhc---h
Confidence 999999999999999999999999755543 111 112222577 336899994 48 69999987 8
Q ss_pred HHHHHHHHHh------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCce
Q 009517 370 AEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGIT 440 (533)
Q Consensus 370 ~~~~~~l~~~------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~ 440 (533)
+++++.+... ...+++.++++++++.+.|+. .++ +...++.+++.+++++.|+++ +.+.
T Consensus 290 ~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~-----------i~~-~~~~~~~~~~g~~l~~~l~~l~~~~~i~ 357 (428)
T PRK07986 290 REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSL-----------LES-GDWQQQVAAIEAQLREELAPLRDAPMVA 357 (428)
T ss_pred HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHH-----------HHh-CCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999888642 336788899999999888741 111 234566666777777777664 4455
Q ss_pred EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHH
Q 009517 441 CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVT 518 (533)
Q Consensus 441 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~ 518 (533)
-++..|.+..+ .+..+. .... +...+.++||++.+. | +.+|+.+. +++++|+++++
T Consensus 358 ~vRg~Gl~~~v-e~~~~~------------~~~~-~~~~l~~~Gl~~~~~-------g-~~i~~~Ppl~it~~ei~~~~~ 415 (428)
T PRK07986 358 DVRVLGAIGVV-ETTRPV------------NMAA-LQRFFVEQGVWIRPF-------G-KLIYLMPPYIILPEQLQRLTA 415 (428)
T ss_pred eEeccceEEEE-EeCCcc------------cHHH-HHHHHHHCCcEEEec-------C-CEEEEeCCCCCCHHHHHHHHH
Confidence 56666765443 233221 1122 334556789999862 1 27999874 89999999999
Q ss_pred HHHHHHHH
Q 009517 519 RLTDFHKN 526 (533)
Q Consensus 519 ~l~~~l~~ 526 (533)
+|.+++++
T Consensus 416 ~l~~~l~~ 423 (428)
T PRK07986 416 AVNRAVQD 423 (428)
T ss_pred HHHHHHhh
Confidence 99998864
No 265
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.88 E-value=4.6e-20 Score=191.67 Aligned_cols=365 Identities=13% Similarity=0.091 Sum_probs=230.1
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.|+++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 34 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~ql~~l 81 (445)
T PRK09221 34 LLVSAEGMYYTDADGRK------ILDGTAGLWCC----------------------NAGHG----RPEIVEAVARQAATL 81 (445)
T ss_pred eEEeccccEEEeCCCCE------EEEccccHhhc----------------------cCCCC----CHHHHHHHHHHHHhc
Confidence 56778888777778777 78876554221 11111 688999999998863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C-CCeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E-NDGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~-gd~Vlv~~p~~~~~ 228 (533)
.......+ ..+....+|+.+.+... ...++|+++++|++|++.+++..+.. + ..+|+....+|++.
T Consensus 82 ~~~~~~~~-----~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 154 (445)
T PRK09221 82 DYAPAFQM-----GHPLAFELAERLAELAP--GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGV 154 (445)
T ss_pred cCcccccc-----CCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCcc
Confidence 22111111 12333445555554322 22468999999999999999987521 1 25799999999987
Q ss_pred HHHHHHhCC-------------eEEEEecCC---CCCCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 229 SASIALHGG-------------TLVPYYLDE---ATGWGL--------ETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 229 ~~~~~~~g~-------------~~~~v~~~~---~~~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
.......+. .+..+|... ...++. ..+++++.++.. ...++.+|+++..+...|
T Consensus 155 t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G 232 (445)
T PRK09221 155 GFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAG 232 (445)
T ss_pred chhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCC
Confidence 543322211 112222210 000111 135666666532 113678888887777778
Q ss_pred c-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 Q-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
. .++++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|+|.++ .| +++|.
T Consensus 233 ~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~~-----~~~~gv~PD-----i~~~gK~l~--gG~~Pi~a 298 (445)
T PRK09221 233 VLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--AFA-----AERFGVTPD-----IITFAKGLT--NGAIPMGA 298 (445)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch--hhH-----HHhcCCCCC-----EEEeccccc--cCccccee
Confidence 7 45677899999999999999999999999765553 111 122223677 568999994 36 78999
Q ss_pred EEEecCCHHHHHHHHH--------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYK--------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ ++++++.+.. ....+++.++++++++.+.|+ ..++ +.+.++.+++.+++++.|+
T Consensus 299 v~~---~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~-----------~i~~-~~l~~~~~~~g~~l~~~l~ 363 (445)
T PRK09221 299 VIA---SDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLD-----------IYRE-EDLFERAAELAPYFEDAVH 363 (445)
T ss_pred eEE---cHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHH
Confidence 988 8898887643 123578889999988888874 1111 2456677777888888887
Q ss_pred cC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CC
Q 009517 435 SL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQ 509 (533)
Q Consensus 435 ~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~ 509 (533)
++ +.+.-++..|.+.. +.+..+... .......++ +.+.++||++.++ + +.+||++. ++
T Consensus 364 ~l~~~~~v~~vrg~Gl~~~-v~~~~~~~~-------~~~~~~~~~-~~~~~~Gv~~~~~-------~-~~lr~~Ppl~~t 426 (445)
T PRK09221 364 SLKGLPHVIDIRNIGLVAG-IELAPRPGA-------PGARGYEAF-MKCFEKGLLVRYT-------G-DTIALSPPLIIE 426 (445)
T ss_pred hhccCCCEEEEecCceEEE-EEEeccccc-------ccchHHHHH-HHHHHCCeEEeec-------C-CEEEEECCccCC
Confidence 65 33444566665432 223211000 000112333 4456789999752 1 27999974 89
Q ss_pred cCcHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~ 527 (533)
+++|++++++|+++++++
T Consensus 427 ~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 427 KAQIDELVDALGDALRAV 444 (445)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999999764
No 266
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=1.4e-20 Score=194.28 Aligned_cols=353 Identities=13% Similarity=0.086 Sum_probs=223.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+.
T Consensus 25 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~i~~ai~~q~~~~ 72 (422)
T PRK05630 25 LVTSTDGVFLTLEDGST------VIDAMSSWWSA----------------------AHGHG----HPRLKAAAHKQIDTM 72 (422)
T ss_pred eEEeceeeEEEECCCCE------EEEcchhHHHh----------------------cCCCC----CHHHHHHHHHHHHhC
Confidence 56667777777777777 78876554322 11111 689999999999874
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
.. ....+.. .+....+|+.+.+..+ ...++++++++|++|++.+++..+.. ++ .+|+....+|++.
T Consensus 73 ~~-~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 145 (422)
T PRK05630 73 SH-VMFGGLT----HEPAIKLTRKLLNLTD--NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGD 145 (422)
T ss_pred CC-cccCCcC----CHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 22 0111111 2233445555544322 22468999999999999999987521 23 5799999999986
Q ss_pred HHHHHHh-CC-------------eEEEEecCCCCCCCCCH-------HHHHHHHHHHHhcCCCeeEEEEeCC-CCCCcc-
Q 009517 229 SASIALH-GG-------------TLVPYYLDEATGWGLET-------SEVKKQLEAAKAKGITVRALVVINP-GNPTGQ- 285 (533)
Q Consensus 229 ~~~~~~~-g~-------------~~~~v~~~~~~~~~ld~-------~~l~~~i~~~~~~g~~~~~iil~~p-~NPtG~- 285 (533)
...+... +. ....+|.... ...+. +.+++.+.. ++.+||++.. +.-.|+
T Consensus 146 t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~ 217 (422)
T PRK05630 146 TFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMR 217 (422)
T ss_pred cHHHhccCCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcc
Confidence 5443322 21 1122222110 11122 334444433 7888988873 777787
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYME 364 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~ 364 (533)
.++.+.+++|.++|++||+++|+||+++++...|. .. ..+..++.|| +.+|+|.++ .| .++|+++
T Consensus 218 ~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~--~~-----a~~~~gv~PD-----i~t~gK~l~--gG~~p~~av~ 283 (422)
T PRK05630 218 FHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE--LF-----ATLAAGVTPD-----IMCVGKALT--GGFMSFAATL 283 (422)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch--hh-----HHHhcCCCCC-----eeeeechhh--cCccccceee
Confidence 56677899999999999999999999999765543 21 1222233688 448899984 37 5899999
Q ss_pred EecCCHHHHHHHHH-------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Q 009517 365 VTGFSAEVREQIYK-------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-- 435 (533)
Q Consensus 365 ~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 435 (533)
+ ++++++.+.. ....|++.++++++++.++|+. .++ +...++.+++.+++.+.|++
T Consensus 284 ~---~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~-----------l~~-~~~~~~~~~~g~~l~~~L~~l~ 348 (422)
T PRK05630 284 C---TDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEI-----------IET-GMWRKQVKRIEAELIAGLSPLA 348 (422)
T ss_pred c---cHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHH-----------HHh-CcHHHHHHHHHHHHHHHHHHhh
Confidence 8 8999888753 1236788999999999888742 111 12344555555566665554
Q ss_pred -CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCc
Q 009517 436 -LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDK 512 (533)
Q Consensus 436 -~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~ 512 (533)
.|.+.-++..|.+..+ .+..+. ....+. ..+.++||++.+. + +.+||.+. +++++
T Consensus 349 ~~~~v~~vRg~Gl~~~i-e~~~~~------------~~~~~~-~~~~~~Gl~~~~~-------g-~~l~~~PpL~it~~~ 406 (422)
T PRK05630 349 HLPGVADVRVLGAIGVV-EMEQPV------------DMEEAT-QAAVDHGVWLRPF-------G-RLVYVMPPYITTSEQ 406 (422)
T ss_pred cCCCeeeeeccccEEEE-EECCcc------------cHHHHH-HHHHHCCeEEEec-------C-CEEEEECCccCCHHH
Confidence 3555666777765443 232110 112333 4566789999762 2 38899985 89999
Q ss_pred HHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKN 526 (533)
Q Consensus 513 i~~~~~~l~~~l~~ 526 (533)
|++++++|+++++.
T Consensus 407 i~~~~~~l~~al~~ 420 (422)
T PRK05630 407 IAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998864
No 267
>PRK07036 hypothetical protein; Provisional
Probab=99.88 E-value=3.8e-20 Score=193.27 Aligned_cols=372 Identities=14% Similarity=0.091 Sum_probs=233.2
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 36 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~q~~~~ 83 (466)
T PRK07036 36 VIVEAEGIYVTDADGRR------YLDGIGGMWCV----------------------NVGYG----REEMADAIADQARRL 83 (466)
T ss_pred eEEeCceeEEEECCCCE------EEECcccHHhh----------------------cCCCC----CHHHHHHHHHHHHhC
Confidence 45566666666677777 88876664221 11111 688999999998863
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~ 228 (533)
.. ...+.. -..+.+..+|+.+..... ...+.|+++++|++|++.+++..+.. ++ .+|+....+|++.
T Consensus 84 ~~--~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~ 157 (466)
T PRK07036 84 PY--YTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGS 157 (466)
T ss_pred cc--cccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCc
Confidence 21 111110 123445556666654322 22468999999999999999987411 22 6799999999997
Q ss_pred HHHHHHhCCe-------------EEEEecCCC--CCCCCC--------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 229 SASIALHGGT-------------LVPYYLDEA--TGWGLE--------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 229 ~~~~~~~g~~-------------~~~v~~~~~--~~~~ld--------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
...+...... +..++.... ..++.. .+.+++.+... .+.++.+||++..+...|.
T Consensus 158 t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~iAavi~EPv~g~gG~ 235 (466)
T PRK07036 158 TYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL--GADNIAAFIAEPILGSGGV 235 (466)
T ss_pred cHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEeCCcCCCCC
Confidence 6444332111 222221110 011221 23344545421 1236888888877766777
Q ss_pred -CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEE
Q 009517 286 -VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYM 363 (533)
Q Consensus 286 -~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v 363 (533)
.++++.+++|.++|++||+++|+||++++|...|. ...+ ....++.|| +.+|+|.++ .| +++|.+
T Consensus 236 ~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~~~----~~~~gv~PD-----ivt~gK~l~--gG~~Pi~av 302 (466)
T PRK07036 236 IVPPPGYHARMREICRRYDILYISDEVVTGFGRLGH--FFAS----EAVFGIQPD-----IITFAKGLT--SGYQPLGAV 302 (466)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCch--hhhh----hhhcCCCCC-----EEEEccccc--cCccccEEE
Confidence 56778899999999999999999999999765552 1111 111223688 667899994 48 599999
Q ss_pred EEecCCHHHHHHHHHh--------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 364 EVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 364 ~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
++ .+++++.+... ...|++.++++++++.+.|+. .+ .+.+.+..+++.++|.+.|++
T Consensus 303 ~~---~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~-----------i~-~~~l~~~~~~~g~~l~~~L~~ 367 (466)
T PRK07036 303 II---SERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEI-----------ME-REGLCEHVREVGPYFEERLAS 367 (466)
T ss_pred EE---cHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHH-----------HH-hCCHHHHHHHHHHHHHHHHHH
Confidence 98 99999887531 225788999999999988841 11 134556666666677777655
Q ss_pred C---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 436 L---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 436 ~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
+ |.+..++..|.|+.+ .+..+... +..... ...+. ..+.++||++.|. + +.+||++.
T Consensus 368 l~~~~~v~~vrG~Gl~~~v-e~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~Gvl~~~~---~-----~~~~l~Ppl 432 (466)
T PRK07036 368 LRELPLVGDVRGDHLMACV-ECVADKGS-----KALLPEDIAIGQRID-RHCQERGLLVRPL---E-----HLCVLSPPL 432 (466)
T ss_pred hccCCCEEEEEeeceEEEE-EEccCccc-----cCCCCchhHHHHHHH-HHHHHCCcEEeec---C-----CEEEEeCCC
Confidence 4 445557777766543 33211100 000000 12333 4456789999862 1 26789975
Q ss_pred -CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++++|+++++++.++++++.++
T Consensus 433 ~it~~~id~~~~~l~~al~~~~~~ 456 (466)
T PRK07036 433 IITRAQIDEIVAILRAAIEETADE 456 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999887554
No 268
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=1.3e-20 Score=194.75 Aligned_cols=358 Identities=13% Similarity=0.060 Sum_probs=226.6
Q ss_pred HHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCC
Q 009517 77 VSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (533)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~ 156 (533)
+.++++...++.||++ ++|+..|.... ..+++ ++++++++.+++.+..
T Consensus 30 i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~ai~~q~~~~~ 77 (429)
T PRK06173 30 VERADGVMITLKDGRR------LIDGMSSWWAA----------------------LHGYN----HPRLNAAATNQLAKMS 77 (429)
T ss_pred EEeceeeEEEcCCCCE------EEEccchHHhc----------------------cCCCC----CHHHHHHHHHHHHhcC
Confidence 4556666666667777 77776553221 11111 5889999999998743
Q ss_pred CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------CC-CeEEEcCCcCcchH
Q 009517 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------EN-DGILCPIPQYPLYS 229 (533)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~g-d~Vlv~~p~~~~~~ 229 (533)
.. ...+.. .+....+|+.+..... ...+.|+++++|++|++.+++..+.. +| .+|+....+|++..
T Consensus 78 ~~-~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t 150 (429)
T PRK06173 78 HI-MFGGFT----HEPAVELAQKLLEILP--PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDT 150 (429)
T ss_pred Cc-cccccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcc
Confidence 20 111111 2233344554443322 23468999999999999999987621 33 57999999999864
Q ss_pred HHHHHh-CC-------------eEEEEecCCCCCCC-----CCHHHHHHHHHHHHhcCCCeeEEEEeCC-CCCCccC-CC
Q 009517 230 ASIALH-GG-------------TLVPYYLDEATGWG-----LETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQV-LA 288 (533)
Q Consensus 230 ~~~~~~-g~-------------~~~~v~~~~~~~~~-----ld~~~l~~~i~~~~~~g~~~~~iil~~p-~NPtG~~-~s 288 (533)
...... |. .+..+|.... .+. -+++.+++.+... +.++.+||++.. +.-.|.. ++
T Consensus 151 ~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~~~~ 226 (429)
T PRK06173 151 WHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDEAIEPLQDLLEQK---GDEIAALILEPVVQGAGGMYFYS 226 (429)
T ss_pred hhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHHHHHHHHHHHHhC---CCcEEEEEEcchhhccCCcccCC
Confidence 322211 11 0112221100 011 1356677777532 337888888874 7777875 78
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEec
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTG 367 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~ 367 (533)
++.+++|.++|++||+++|+||++.+|..+|. ... .+..++.|| +.+|+|.++ .| ++++.+++
T Consensus 227 ~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~--~~a-----~~~~gv~PD-----iv~~gK~l~--gG~~p~~a~~~-- 290 (429)
T PRK06173 227 PTYLVKARELCDQYGVLLIFDEIATGFGRTGK--LFA-----LEHAGVVPD-----IMCIGKALT--GGYLTLSATIT-- 290 (429)
T ss_pred HHHHHHHHHHHHHcCCeEEecchhcCCCcCCc--chH-----HHhcCCCCC-----EEEeehhhh--CCccccceEEe--
Confidence 88899999999999999999999998655443 111 122223577 335999994 48 58999988
Q ss_pred CCHHHHHHHHH------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC
Q 009517 368 FSAEVREQIYK------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EG 438 (533)
Q Consensus 368 ~~~~~~~~l~~------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g 438 (533)
.+++++.+.. ....|++.++++++++.+.|+ ..++ +...++.+++.++|++.|+++ +.
T Consensus 291 -~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~-----------~i~~-~~~~~~~~~~g~~l~~~L~~~~~~~~ 357 (429)
T PRK06173 291 -TEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR-----------LLLE-SPWQQNIQRIEAQLKQELAPAAEFDS 357 (429)
T ss_pred -cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 8999887753 123567789999999988874 2221 234666777777788877754 33
Q ss_pred ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHH
Q 009517 439 ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAI 516 (533)
Q Consensus 439 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~ 516 (533)
+.-++..|.+..+ .+..+. .... +.+.|.++||++.+. + +.+||.+. +++++|+++
T Consensus 358 v~~vRg~Gl~~~i-el~~~~------------~~~~-i~~~l~e~Gi~v~~~-------g-~~l~~~Ppl~it~~ei~~~ 415 (429)
T PRK06173 358 VAEVRVLGAIGVV-EMKEPV------------NMAT-LQPRFVEHGIWVRPF-------G-KLVYIMPPFIISPDELSQL 415 (429)
T ss_pred eeeeeccceEEEE-EeCCcc------------cHHH-HHHHHHHCCeEEEec-------C-CEEEEeCCccCCHHHHHHH
Confidence 4345566655432 232111 1122 335566789999862 1 28999995 899999999
Q ss_pred HHHHHHHHHHHH
Q 009517 517 VTRLTDFHKNFM 528 (533)
Q Consensus 517 ~~~l~~~l~~~~ 528 (533)
+++|+++++++.
T Consensus 416 ~~~l~~~l~~~~ 427 (429)
T PRK06173 416 TSGLLRVLKQEY 427 (429)
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 269
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=1.4e-19 Score=187.25 Aligned_cols=225 Identities=16% Similarity=0.188 Sum_probs=159.0
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHh
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALH 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~ 235 (533)
.+.|... |.+ .++++++++.+..| .+++++++++++++..++. ++ ++||+|+++.|.|..+... +...
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il~-ll-~~GD~VI~~~~~y~~t~~ll~~~l~~~ 195 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVTH-LI-KNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHHH-Hh-CCCCEEEEcCCchhhHHHHHHHHHHHC
Confidence 4567765 554 57777777776544 5677888888999977664 55 7999999999999987643 4467
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|++++.++. .|++++++++++ ++++|++++|+||||.+. ++++|+++|++||+++|+|++|...
T Consensus 196 G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i~---Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 196 GVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQIS---DIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred CeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCHH---HHHHHHHHHHHcCCEEEEECCcccc
Confidence 888887753 368999998876 799999999999999974 4999999999999999999998643
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~ 394 (533)
.. +. + + +. ..| +++.|++|.+.|..+.-.|++++ .++.+...+...+. .....+++.++++
T Consensus 260 ~~-~~-p------l--~~---gaD---ivv~S~tK~l~G~gdv~gG~v~~--~~~~l~~~~~~~~~~~g~~l~p~~A~l~ 321 (464)
T PLN02509 260 VL-SR-P------L--EL---GAD---IVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_pred cc-CC-h------h--hc---CCc---EEEecCcccccCCCccceeEEEe--ccHHHHHHHHHHHHhcCCCcCHHHHHHH
Confidence 32 11 1 1 11 234 88999999985433344677765 24555555554443 2233455555444
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
...| +.+..+.++..++++.+.+.|++.|.++
T Consensus 322 lr~L--------------~tL~~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 322 LRGI--------------KTMALRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred Hhhh--------------hhHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4443 3455666777788888999998876653
No 270
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=2.4e-19 Score=183.30 Aligned_cols=320 Identities=14% Similarity=0.116 Sum_probs=207.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCccc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc-----
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI----- 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~----- 211 (533)
.+++++++.+.+.+... +...=.-..|. .+|.+++|++++ .+..++.++|..|...++.++.
T Consensus 118 ~p~v~~a~~~ai~~yG~-g~~gSrl~~G~~~~h~~LE~~LA~f~g--------~e~all~sSGy~AN~~~i~aL~~~~~~ 188 (476)
T PLN02955 118 HPTISNAAANAAKEYGM-GPKGSALICGYTTYHRLLESSLADLKK--------KEDCLVCPTGFAANMAAMVAIGSVASL 188 (476)
T ss_pred CHHHHHHHHHHHHHcCC-CCCCcCccccChHHHHHHHHHHHHHHC--------CCcEEEECChHHHHHHHHHHHhhcccc
Confidence 68899999888876532 11111123343 678888888864 5677888888888888887762
Q ss_pred --------cCCCCeEEEcCCcCcchHHHHHHh----CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 009517 212 --------RSENDGILCPIPQYPLYSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (533)
Q Consensus 212 --------~~~gd~Vlv~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p 279 (533)
...++.|+...-.|......++.. +++++.++. -|+++|++.++... .+.++|++...
T Consensus 189 ~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~---~~~~~Vv~EgV 258 (476)
T PLN02955 189 LAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCK---MKRKVVVTDSL 258 (476)
T ss_pred ccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHHHhCC---CCceEEEEeCC
Confidence 134566777777787888887776 466666653 38999999997642 23455665566
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe
Q 009517 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (533)
Q Consensus 280 ~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r 359 (533)
-+++|.+.+ +++|.++|++||+++|+||+|..++++.... . ....+ +..++ ..|+++||||++ |.+
T Consensus 259 ~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~--G---~~e~~-g~~~d-i~ii~~TLsKA~----G~~ 324 (476)
T PLN02955 259 FSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGG--G---VAEEF-NCEAD-VDLCVGTLSKAA----GCH 324 (476)
T ss_pred CCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCC--c---HHHHh-CCCCC-CcEEEEeCccch----hcc
Confidence 899999999 8999999999999999999999887753211 1 11111 11223 458899999987 456
Q ss_pred eEEEEEecCCHHHHHHHHHhhh--ccccCChH-HHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 360 GGYMEVTGFSAEVREQIYKVAS--VNLCSNIS-GQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 360 iG~v~~~~~~~~~~~~l~~~~~--~~~~~~~~-~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
.||+++ ++++++.+..... .++++.++ ...++.+.+. ........++++.++.+++++. .
T Consensus 325 GGfi~g---s~~~~~~l~~~~~~~ifStalpp~~aaa~laal~-----------l~~~~~~~r~~L~~n~~~fr~~---~ 387 (476)
T PLN02955 325 GGFIAC---SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVV-----------VARKEKWRRKAIWERVKEFKAL---S 387 (476)
T ss_pred Cceeec---HHHHHHHHHHhCCCCeecccccHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHh---c
Confidence 699887 8889988876543 22233332 3333333332 1111123556677777777763 2
Q ss_pred CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHH
Q 009517 437 EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIP 514 (533)
Q Consensus 437 ~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~ 514 (533)
|+.+ + ..++.+ -+..+. ....+.+.|.++||++.+-.....+.+...+||++. +++++|+
T Consensus 388 -G~~~--~-sPI~pI-~ig~~~-------------~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId 449 (476)
T PLN02955 388 -GVDI--S-SPIISL-VVGNQE-------------KALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVK 449 (476)
T ss_pred -CCCC--C-CCEEEE-EeCCHH-------------HHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHH
Confidence 5543 1 222211 122221 122234556678999998666555566668999995 8999999
Q ss_pred HHHHHHHHHHHHHH
Q 009517 515 AIVTRLTDFHKNFM 528 (533)
Q Consensus 515 ~~~~~l~~~l~~~~ 528 (533)
+++++|.++.+...
T Consensus 450 ~lv~~L~~~~~~~~ 463 (476)
T PLN02955 450 KLITALSSCLDFDN 463 (476)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999998876543
No 271
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=1.8e-19 Score=182.75 Aligned_cols=223 Identities=15% Similarity=0.189 Sum_probs=157.9
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHhC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHG 236 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~g 236 (533)
+.|+ .+..+.++++++.+....+ .+..++++++++|+..++..++ ++||+|+++.|.|+++.. .++..|
T Consensus 56 y~Ys--R~gnPt~~~Le~~la~le~----~~~~v~~sSG~aAi~~~l~all-~~GD~Vlv~~~~Y~~~~~l~~~~l~~~G 128 (395)
T PRK05967 56 YTYG--TRGTPTTDALCKAIDALEG----SAGTILVPSGLAAVTVPFLGFL-SPGDHALIVDSVYYPTRHFCDTMLKRLG 128 (395)
T ss_pred CccC--CCCChHHHHHHHHHHHHhC----CCCEEEECcHHHHHHHHHHHhc-CCCCEEEEccCCcHHHHHHHHHHHHhcC
Confidence 3454 3345555556655554332 2334555668899999999998 899999999999999764 456789
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+++..++.. +.+.+++++++ ++|+|++++|+||++.+ .++++|+++|+++|+++|+|++|....
T Consensus 129 i~v~~vd~~-------~~e~l~~al~~------~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~ 192 (395)
T PRK05967 129 VEVEYYDPE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPL 192 (395)
T ss_pred eEEEEeCCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCce
Confidence 988887532 35778888876 79999999999998655 459999999999999999999997643
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILAS 395 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~ 395 (533)
+- .+ + ++ ..| |++.|.+|.++|-.+.-.|+++. ++++.+.+..... ...+.++..+..+.
T Consensus 193 ~~--~p------l--~~---GaD---ivv~S~tKy~~Gh~d~~~G~v~~---~~~~~~~l~~~~~~~G~~~~p~da~l~~ 253 (395)
T PRK05967 193 YF--RP------L--DF---GVD---ISIHAATKYPSGHSDILLGTVSA---NEKCWPQLLEAHGTLGLCAGPDDTYQIL 253 (395)
T ss_pred ec--Ch------h--Hc---CCC---EEEEecccccCCCCCeeEEEEEc---CHHHHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 31 11 1 11 234 88999999987666688897765 6776666654433 44556666665555
Q ss_pred HHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 396 LVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 396 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.-|+ .+..+.++..++...+.+.|++.|.+
T Consensus 254 rgl~--------------Tl~lR~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 254 RGLR--------------TMGIRLEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred cCcc--------------cHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4443 23444555666777788888887654
No 272
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.87 E-value=1.5e-19 Score=183.90 Aligned_cols=289 Identities=15% Similarity=0.182 Sum_probs=193.7
Q ss_pred cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCC
Q 009517 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE 246 (533)
Q Consensus 167 ~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~ 246 (533)
....+++++++++++ .+++++++|+++|+..++..+...+||+|+++.++|..+...+...|.+++.+++++
T Consensus 18 ~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (352)
T cd00616 18 PKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDP 89 (352)
T ss_pred HHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCC
Confidence 347899999999974 356888899999999999988326899999999999999999999999999999875
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccH
Q 009517 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (533)
Q Consensus 247 ~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~ 326 (533)
.++.+|++.+++.+++ ++++|++++ ++|.+.+ +++|.++|+++|+++|+|++++.........
T Consensus 90 -~~~~~d~~~l~~~i~~------~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~---- 152 (352)
T cd00616 90 -DTYNIDPELIEAAITP------RTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKGRK---- 152 (352)
T ss_pred -CcCCcCHHHHHHhcCc------CCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECCEE----
Confidence 3678999999998865 789998764 6898877 8888999999999999999997422111110
Q ss_pred HHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhcc----------------ccCCh
Q 009517 327 KKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN----------------LCSNI 388 (533)
Q Consensus 327 ~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~----------------~~~~~ 388 (533)
+ .. ..+ +.+.||+ |.+ + +.+.|+++. .++++.+.+..+.... ...+.
T Consensus 153 --~-~~----~~d---~~~~S~~~~K~~-~--~~~gg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T cd00616 153 --V-GT----FGD---AGAFSFHPTKNL-T--TGEGGAVVT--NDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSE 217 (352)
T ss_pred --c-cc----Ccc---eeEEcCCCCCCC-c--ccCceEEEE--CCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCH
Confidence 0 00 112 4567766 877 3 446788876 3567877776543211 11222
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc------eeEEecccCCCHHHHH
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEG------AMYLFPRIQLPEKAIK 462 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g------g~~~~~~~~~~~~~~~ 462 (533)
+..+++... .+.++.+.++.+++.+++++.|.+++|+++..+.. .++.+ .++...+
T Consensus 218 ~~aa~~~~~--------------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~--- 279 (352)
T cd00616 218 IQAAIGLAQ--------------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVI-RLDPEAG--- 279 (352)
T ss_pred HHHHHHHHH--------------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEE-EECCcCC---
Confidence 222222222 13345566667788889999999988888764322 22222 1221000
Q ss_pred HHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC---------------C-----CCceEEEEec--CCcCcHHHHHHHH
Q 009517 463 AAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV---------------P-----GTWHFRCTIL--PQEDKIPAIVTRL 520 (533)
Q Consensus 463 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~---------------~-----g~~~iRis~~--~~~e~i~~~~~~l 520 (533)
.+...+ .+.|.++||.+......... + ..+.|||++. .++++|+.++++|
T Consensus 280 -------~~~~~v-~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l 351 (352)
T cd00616 280 -------ESRDEL-IEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEAL 351 (352)
T ss_pred -------CCHHHH-HHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHh
Confidence 122333 35567789966532111000 0 0248999996 8999999888876
Q ss_pred H
Q 009517 521 T 521 (533)
Q Consensus 521 ~ 521 (533)
+
T Consensus 352 ~ 352 (352)
T cd00616 352 R 352 (352)
T ss_pred C
Confidence 3
No 273
>PLN02651 cysteine desulfurase
Probab=99.87 E-value=8.1e-20 Score=186.56 Aligned_cols=310 Identities=15% Similarity=0.169 Sum_probs=202.9
Q ss_pred CCHHHHHHHHHHHhcCCCCCc---cccCC--CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc---
Q 009517 140 FSADSIERAWQILDQIPGRAT---GAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI--- 211 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~---~~Y~~--~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--- 211 (533)
+|+.+++++.+.+........ +.+.. ..-+.++|+.+++++ | .++++|++|+|+++++..++..+.
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~t~~~t~a~~~~l~~~~~~~ 84 (364)
T PLN02651 11 IDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI----G--ADPKEIIFTSGATESNNLAIKGVMHFY 84 (364)
T ss_pred CCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHHHhc
Confidence 378999998887754221000 00111 111345566666665 4 557899999999999888876652
Q ss_pred cCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 212 RSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
..+||+|+++...|+.+... +...|.+++.+++++ ++.+|+++++++|++ +++++++++++||||.+.+
T Consensus 85 ~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~ 156 (364)
T PLN02651 85 KDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRP------DTALVSVMAVNNEIGVIQP 156 (364)
T ss_pred cCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCC------CcEEEEEECCCCCceeccc
Confidence 15789999999777765443 345688999998864 457899999999976 7999999999999999998
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|.++|+++|+++++|.+++. |..+ ..+ .++ ..| +++.|..|.+ |++| +|++.+
T Consensus 157 ---l~~I~~~~~~~g~~~~vD~a~~~----g~~~-~~~----~~~---~~D---~~~~s~hK~~-gp~G--~g~l~v--- 212 (364)
T PLN02651 157 ---VEEIGELCREKKVLFHTDAAQAV----GKIP-VDV----DDL---GVD---LMSISGHKIY-GPKG--VGALYV--- 212 (364)
T ss_pred ---HHHHHHHHHHcCCEEEEEcchhh----CCcc-cCc----ccC---CCC---EEEechhhhC-CCCc--eEEEEE---
Confidence 88999999999999999999975 2111 111 111 234 7788899954 5444 677776
Q ss_pred CHHHHHHHHHhh--------hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc
Q 009517 369 SAEVREQIYKVA--------SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGI 439 (533)
Q Consensus 369 ~~~~~~~l~~~~--------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~ 439 (533)
+++....+.... ....+++..+..++.++|+ .+.+..+.+.++.++.++++.+.|++ ++|+
T Consensus 213 ~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~----------~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~ 282 (364)
T PLN02651 213 RRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACE----------LAMKEMDYDEKHMKALRERLLNGLRAKLGGV 282 (364)
T ss_pred cCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCE
Confidence 554443332221 0223456666666666663 12234566778888889999999986 5788
Q ss_pred eEecCC------ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----------------
Q 009517 440 TCNKAE------GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP---------------- 497 (533)
Q Consensus 440 ~~~~~~------gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~---------------- 497 (533)
.++.|. .+...+ .++ . . +.+.+. ..|.+ |.+..|+.+....
T Consensus 283 ~i~~~~~~~~~~~~i~~~-~~~--~----------~-~~~~~~-~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~ 345 (364)
T PLN02651 283 RVNGPRDPEKRYPGTLNL-SFA--Y----------V-EGESLL-MGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEM 345 (364)
T ss_pred EEECCCCcccCcCCEEEE-EeC--C----------C-CHHHHH-HHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHH
Confidence 887652 223332 122 1 1 123333 44544 9999888664220
Q ss_pred CCceEEEEec--CCcCcHH
Q 009517 498 GTWHFRCTIL--PQEDKIP 514 (533)
Q Consensus 498 g~~~iRis~~--~~~e~i~ 514 (533)
..+.+|+|++ +|++||+
T Consensus 346 ~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 346 AHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred hCceEEEEcCCCCCHHHcC
Confidence 1358999997 6777653
No 274
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=4.6e-19 Score=181.22 Aligned_cols=317 Identities=17% Similarity=0.134 Sum_probs=188.1
Q ss_pred CHHHHHHHHHHHhcCC------CCCccccC----CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh
Q 009517 141 SADSIERAWQILDQIP------GRATGAYS----HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL 210 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~------~~~~~~Y~----~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 210 (533)
++.+.+++.+++.+.. +.+..+.. ...-+.++++.+|++++ . ++.+++++|. .++..++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~~~l~~~sG~-~a~~~~~~~~ 91 (370)
T PRK05937 20 SDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-PEAFIVPSGY-MANLGLCAHL 91 (370)
T ss_pred CHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CeEEEECChH-HHHHHHHHHh
Confidence 4666777666665431 10122222 22235677888888774 2 2235555555 5555555555
Q ss_pred ccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 211 IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 211 ~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
. .+||.|++..-.|......++......+.++ ..|++++++.++.....++++.+|++++++|+||.+.+
T Consensus 92 ~-~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p-- 161 (370)
T PRK05937 92 S-SVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP-- 161 (370)
T ss_pred C-CCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC--
Confidence 4 5677777766666666666666543333332 35899999999864322234567778899999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+++|.++|+++|+++++||+|....+.... . .+...+. .++. .+.+.||||.+ |+.|.+ ++. .+
T Consensus 162 -l~eI~~l~~~~~~~livDea~~~G~~g~~g--~---g~~~~~~--~~~~-~~~~~tlsK~~-g~~G~~---vl~---~~ 225 (370)
T PRK05937 162 -LEQIIALSKKYHAHLIVDEAHAMGIFGDDG--K---GFCHSLG--YENF-YAVLVTYSKAL-GSMGAA---LLS---SS 225 (370)
T ss_pred -HHHHHHHHHHcCCEEEEECCccccccCCCC--C---chHHhhC--CCCC-cEEEEechhhh-hcCceE---EEc---CH
Confidence 889999999999999999999854332111 1 1111111 1221 35688999998 666633 333 56
Q ss_pred HHHHHHHHhh-h--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCceEecCCc
Q 009517 371 EVREQIYKVA-S--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-EGITCNKAEG 446 (533)
Q Consensus 371 ~~~~~l~~~~-~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~g 446 (533)
++...+.... . ...+.++.+..++.++++- ..+..+..++++++.++++.+.|... ++. .
T Consensus 226 ~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~----------l~~~~~~~~~~l~~l~~~l~~~l~~~~~~~--~---- 289 (370)
T PRK05937 226 EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDF----------LSQEGELARKQLFRLKEYFAQKFSSAAPGC--V---- 289 (370)
T ss_pred HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHH----------HHhCcHHHHHHHHHHHHHHHHhcCCCCCCC--E----
Confidence 6555544221 1 2233455655555455421 11112334566777777887777543 111 0
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
..++ ++.. .... +.+.|.++||.+.... . +..+.+|+|+. .++++|+++++.|++++
T Consensus 290 -~~i~--~~~~-------------~~~~-~~~~L~~~gi~v~~~~--~--~~~~~iRis~~~~~t~edid~l~~~L~~~~ 348 (370)
T PRK05937 290 -QPIF--LPGI-------------SEQE-LYSKLVETGIRVGVVC--F--PTGPFLRVNLHAFNTEDEVDILVSVLATYL 348 (370)
T ss_pred -EEEE--eCCh-------------hHHH-HHHHHHHCCeeEEeeC--C--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 1122 2210 1222 3456777899887421 1 22238999996 89999999999999998
Q ss_pred HHHH
Q 009517 525 KNFM 528 (533)
Q Consensus 525 ~~~~ 528 (533)
+++.
T Consensus 349 ~~~~ 352 (370)
T PRK05937 349 EKYQ 352 (370)
T ss_pred HHhC
Confidence 8764
No 275
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.87 E-value=1.2e-19 Score=185.19 Aligned_cols=284 Identities=13% Similarity=0.144 Sum_probs=190.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~v~~ 244 (533)
..+|++.+++++ | .++++++++++.++..++. ++ ++||+|+++.+.|...... +...|++++.++.
T Consensus 49 ~~~le~~la~l~----g----~~~~l~~~sG~~al~~~l~-ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 49 RTALESLLAKLD----K----ADRAFAFSSGMAALDVITR-LL-NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 345666666654 3 2567777888889998876 56 7999999999999876553 4557999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
. |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ..
T Consensus 119 ~-------d~~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~-----~~ 177 (378)
T TIGR01329 119 T-------DLDKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL-----CN 177 (378)
T ss_pred C-------CHHHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 3 78999999976 8999999999999999998 99999999999999999999853211 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~ 403 (533)
++ ++ ..| +++.|++|.++|..|.+.|++++ .++++.+.+..... ...+.++..+..+...|+
T Consensus 178 ~l-----~~---g~D---i~v~S~tK~l~G~~~~~~G~v~~--~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~---- 240 (378)
T TIGR01329 178 PL-----EL---GAD---IVYHSATKFLAGHSDVMAGVLAV--KGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIK---- 240 (378)
T ss_pred hh-----hc---CCc---EEEEecceeccCCccceeEEEEe--CcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCC----
Confidence 11 11 134 88999999986655688999987 35666677766654 344555665544443332
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe------------------cCCceeEEecccCCCHHHHHHHH
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN------------------KAEGAMYLFPRIQLPEKAIKAAE 465 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~------------------~~~gg~~~~~~~~~~~~~~~~~~ 465 (533)
.+..+.++-.++...+.+.|++.|.+..+ ...|+++.|. +. +
T Consensus 241 ----------tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~-~~---~------ 300 (378)
T TIGR01329 241 ----------TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFE-TG---S------ 300 (378)
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEE-EC---C------
Confidence 23334445555666666677665443211 1234555542 22 1
Q ss_pred hcCCCChHHHHHHHHHccceEEEcCCCCCC------------C------C--CCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 466 AEKTVPDAFYCRRLLNATGIVLVPGSGFGQ------------V------P--GTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 466 ~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~------------~------~--g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
......|+ ..|+..++.+.-|..... . . ..+.||||+++ |+.+.+++.|+++++
T Consensus 301 ---~~~~~~~~-~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~ 374 (378)
T TIGR01329 301 ---VALSKRLV-EATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI--EDVDDLISDLDIAFV 374 (378)
T ss_pred ---HHHHHHHH-HhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHH
Confidence 01123344 344667777777755420 0 0 13489999996 457888888888887
Q ss_pred H
Q 009517 526 N 526 (533)
Q Consensus 526 ~ 526 (533)
+
T Consensus 375 ~ 375 (378)
T TIGR01329 375 T 375 (378)
T ss_pred h
Confidence 4
No 276
>PRK12403 putative aminotransferase; Provisional
Probab=99.86 E-value=2.6e-19 Score=186.87 Aligned_cols=371 Identities=13% Similarity=0.098 Sum_probs=225.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... .+... ++++++++.+++.+.
T Consensus 39 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~--------------------~lGh~------hp~v~~A~~~q~~~~ 86 (460)
T PRK12403 39 VMVRGEGLHLWDNDGKR------YLDGMSGLWCT--------------------NLGYG------RKDLAAAAARQMEQL 86 (460)
T ss_pred eEEeceeeEEEeCCCCE------EEECchhHHhh--------------------cCCCC------CHHHHHHHHHHHHhC
Confidence 56778888888888887 77765553221 00111 689999999999874
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
.. ...+ ..+..+....+++.+....+ ...+.++++++|++|++.+++.++. .++ ..|+....+|++.
T Consensus 87 ~~--~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~ 160 (460)
T PRK12403 87 PY--YNMF--FHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGS 160 (460)
T ss_pred CC--eecc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcc
Confidence 21 1111 11223444445555544322 2236899999999999999998851 122 3455666788886
Q ss_pred HHHHHHh-CCe-----------EEEEecCC--CCCCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-
Q 009517 229 SASIALH-GGT-----------LVPYYLDE--ATGWGL--------ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ- 285 (533)
Q Consensus 229 ~~~~~~~-g~~-----------~~~v~~~~--~~~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~- 285 (533)
....... |.. +..+|... ...+.+ +.+.+++.+.+. ...++.+||++..+.-.|.
T Consensus 161 t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~ 238 (460)
T PRK12403 161 TLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMI 238 (460)
T ss_pred cHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCc
Confidence 4433222 211 12222110 000111 124455555432 1125778887766666686
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC-eeEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGYME 364 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~-riG~v~ 364 (533)
..+++.+++|.++|++||+++|+||++++|...|. ... .+..++.|| +.+|+|.++ .|+ ++|.++
T Consensus 239 ~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--~~a-----~e~~gv~PD-----iv~~gK~lg--gG~~Piga~v 304 (460)
T PRK12403 239 FPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGE--WFA-----HEHFGFEPD-----TLSIAKGLT--SGYVPMGGLV 304 (460)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhh-----hhhcCCCCC-----eEEEccccc--ccccceEEEE
Confidence 45778899999999999999999999999766553 111 122233677 345899995 485 999998
Q ss_pred EecCCHHHHHHHHH----h-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHH-HHHHHHHHHHhc---
Q 009517 365 VTGFSAEVREQIYK----V-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA-RRAKTLEDAFNS--- 435 (533)
Q Consensus 365 ~~~~~~~~~~~l~~----~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~--- 435 (533)
+ .+++++.+.. . ...|++.++++++++.+.|+. .++ +.+.++.+ ++.+++++.|++
T Consensus 305 ~---~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~-----------i~~-~~l~~~~~~~~g~~l~~~L~~l~~ 369 (460)
T PRK12403 305 L---SKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKA-----------LRD-EGVVTRVKDDTGPYLQRCLREVFG 369 (460)
T ss_pred E---CHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHH-----------HHh-ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 8 8888887753 1 236788999999999988841 111 22444553 555566666554
Q ss_pred -CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCC---hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CC
Q 009517 436 -LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP---DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQ 509 (533)
Q Consensus 436 -~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~ 509 (533)
.+.+.-++..|.|+.+ .+..+... +..... ....+...+.++||++.+. .+ .+|+++. ++
T Consensus 370 ~~~~i~~vrG~Gl~~gi-e~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Gll~~~~------~~--~~~l~Ppl~it 435 (460)
T PRK12403 370 DHPLVGEVQGAGLVAAL-QFAEDKAT-----RKRFANENDLAWRCRTIGFEEGVIIRST------LG--RMIMAPALVAG 435 (460)
T ss_pred cCCCEEeEeecceEEEE-EEccCccc-----cccccchhHHHHHHHHHHHhCCEEEEec------CC--EEEEECCCCCC
Confidence 3445667777776543 23211000 000000 0111223445689999852 11 5789986 69
Q ss_pred cCcHHHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~~~ 529 (533)
+++|++++++++++++++.+
T Consensus 436 ~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 436 RAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998854
No 277
>PRK06148 hypothetical protein; Provisional
Probab=99.86 E-value=5.6e-20 Score=207.83 Aligned_cols=371 Identities=13% Similarity=0.049 Sum_probs=233.4
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
..+.++++...++.||++ ++|+..|.... ... ++.+++++.+++.+
T Consensus 608 ~~i~~g~G~~l~D~dG~~------ylD~~~g~~~l----------------------GH~------hp~v~~Ai~~q~~~ 653 (1013)
T PRK06148 608 IKFVRGWGVWLIDNRGRA------YLDCFNNVCHV----------------------GHA------HPRVVAAAARQAAR 653 (1013)
T ss_pred ceEEEeeecEEEECCCCE------EEEcccChhhc----------------------CCC------CHHHHHHHHHHHhh
Confidence 355666666666667776 66665443111 111 68899999999986
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHH
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIA 233 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~ 233 (533)
... ...|. .+....+|+.+.+... ...+.++++++|+||++.+++..+...| .+|+....+|++......
T Consensus 654 l~~--~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~ 724 (1013)
T PRK06148 654 LNT--NTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELI 724 (1013)
T ss_pred cCC--cCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchh
Confidence 421 22232 2334445555554322 2236899999999999999999864344 679999999998764332
Q ss_pred HhCC-------------eEEEEecC--CCCCCCC-C-------HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCH
Q 009517 234 LHGG-------------TLVPYYLD--EATGWGL-E-------TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAE 289 (533)
Q Consensus 234 ~~g~-------------~~~~v~~~--~~~~~~l-d-------~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~ 289 (533)
.... .+..++.. ....|.. + .+.+++.++.....+.++.+||++..+.-.|. .+++
T Consensus 725 s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~ 804 (1013)
T PRK06148 725 DLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPE 804 (1013)
T ss_pred hcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCH
Confidence 2110 01111110 0001221 1 14566666432222346888888866554554 6688
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+.+++|.++|++||+++|+||++++|...|. .+..+ +..++.|| +.+++|.++ .|+++|.+++ .
T Consensus 805 ~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~-~~~a~-----e~~gv~PD-----ivt~gK~lg--gG~Plgav~~---~ 868 (1013)
T PRK06148 805 GYLREVYAMVRAAGGVCIADEVQVGFGRVGS-HWWAF-----ETQGVVPD-----IVTMGKPIG--NGHPMGAVVT---T 868 (1013)
T ss_pred HHHHHHHHHHHHhCCEEEEEecccCCCCCCC-cchhh-----hhcCCCcc-----eeeeccccc--CCcceEEEEE---c
Confidence 8899999999999999999999999866553 12222 11223688 678899995 4999999998 8
Q ss_pred HHHHHHHHHh--hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceEec
Q 009517 370 AEVREQIYKV--ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITCNK 443 (533)
Q Consensus 370 ~~~~~~l~~~--~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~ 443 (533)
+++++.+... ...|++.++++++++.+.|+ ..+ -+.+.+..+++.++|++.|+++ |.+.-++
T Consensus 869 ~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~-----------~i~-~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~Vr 936 (1013)
T PRK06148 869 REIADSFDNGMEYFNTFGGNPVSCAIGLAVLD-----------IIE-DEDLQRNALEIGNYLLAGLRELQDRFDIIGDVR 936 (1013)
T ss_pred HHHHhhccCCCccccCCCCCHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Confidence 9999887542 23778999999999998884 121 1345566677777777777664 4455677
Q ss_pred CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 444 AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 444 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
..|.|+.+ .+..+... ..........+...+.++||++.+...+ .+.+||.+. +++++|++++++|+
T Consensus 937 G~Gl~~gv-el~~~~~~-----~~~~~~~~~~i~~~~~~~Gvl~~~~g~~-----~~vlr~~Ppl~it~~~id~~l~~l~ 1005 (1013)
T PRK06148 937 GMGLFLGI-ELVTDRKT-----KAPATAIARYVKNGARERGILIGTEGPH-----DNVLKIRPPLIFSRADADHLLEVLD 1005 (1013)
T ss_pred eeceEEEE-EecCCccc-----cCccHHHHHHHHHHHHhCCeEEeccCCC-----CCEEEEeCCccCCHHHHHHHHHHHH
Confidence 77766543 23211000 0000001122334455689999874222 237888885 89999999999999
Q ss_pred HHHHHH
Q 009517 522 DFHKNF 527 (533)
Q Consensus 522 ~~l~~~ 527 (533)
++++++
T Consensus 1006 ~~l~~~ 1011 (1013)
T PRK06148 1006 DVLAAA 1011 (1013)
T ss_pred HHHHHH
Confidence 999865
No 278
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=4.3e-19 Score=180.91 Aligned_cols=213 Identities=16% Similarity=0.188 Sum_probs=150.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc-hHH---HHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YSA---SIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~-~~~---~~~~~g~~~~~v~~ 244 (533)
..+|++.+|++.+ . ...+++++ ++.++..++. ++ .+||+|+++.|+|.+ |.. .+...|++++.++.
T Consensus 52 ~~~Le~~lA~l~g------~-~~~~~~~s-G~aai~~~~~-~l-~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 52 RAALEELIAVLEG------G-HAGFAFGS-GMAAITAVMM-LF-SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHhC------C-CceEEeCC-HHHHHHHHHH-Hh-CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 6788888888864 2 23355444 5678877664 55 799999999999984 432 33446888888863
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
.|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .+
T Consensus 122 -------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~--~p-- 181 (377)
T PRK07671 122 -------SNLEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ--SP-- 181 (377)
T ss_pred -------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC--Ch--
Confidence 379999999976 7999999999999999977 889999999999999999999753331 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~ 403 (533)
+ . + ..| |++.|+||.++|..+.-.|++++ .++++++.+...+. .....++.....+..-++
T Consensus 182 -~-~----~---g~D---ivv~S~sK~l~G~~~~~~G~~v~--~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~---- 243 (377)
T PRK07671 182 -I-S----L---GAD---IVLHSATKYLGGHSDVVAGLVVV--NSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK---- 243 (377)
T ss_pred -h-h----h---CCe---EEEecCcccccCCccceeEEEEe--CcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC----
Confidence 1 1 1 123 88999999995433345676665 36778888876665 334445555554443332
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.+....++..++...+.+.|++.|++
T Consensus 244 ----------tl~~R~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 244 ----------TLGIRMEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 23445566677888899999887664
No 279
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=9.2e-19 Score=173.31 Aligned_cols=303 Identities=16% Similarity=0.182 Sum_probs=220.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDE 246 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~ 246 (533)
..++.+.+.+.+...++.. +.+-++++.+++.+++.++..++ .|||+|++...+..+ +.++++.+|++++.+....
T Consensus 36 F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~-~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~w 113 (383)
T COG0075 36 FVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLV-EPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEW 113 (383)
T ss_pred HHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCC
Confidence 4566666666666666633 23456777889999999999999 899999999888776 6789999999999998875
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccH
Q 009517 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (533)
Q Consensus 247 ~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~ 326 (533)
.. .+|+++++++|++ +++.++|.++|.-.+||+..+ +++|+++|++||.++|+|.+-+ +++. +. .
T Consensus 114 g~--~v~p~~v~~~L~~----~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS---~Gg~-~~-~- 178 (383)
T COG0075 114 GE--AVDPEEVEEALDK----DPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSS---LGGE-PL-K- 178 (383)
T ss_pred CC--CCCHHHHHHHHhc----CCCccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEeccc---CCCc-cc-c-
Confidence 43 7899999999995 347889999999999999998 9999999999999999999987 3332 21 1
Q ss_pred HHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh---------------h----hccccCC
Q 009517 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV---------------A----SVNLCSN 387 (533)
Q Consensus 327 ~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~---------------~----~~~~~~~ 387 (533)
. +..+-.+++.+-.|+++++||+ |.+.+ +++..+.+... . ...++++
T Consensus 179 ---v------d~wgiDv~itgSQK~l~~PPGl--a~v~~---S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tpp 244 (383)
T COG0075 179 ---V------DEWGIDVAITGSQKALGAPPGL--AFVAV---SERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPP 244 (383)
T ss_pred ---h------hhcCccEEEecCchhccCCCcc--ceeEE---CHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCC
Confidence 1 2223347788889999888886 55555 66666555421 1 1235566
Q ss_pred hHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEe--cccCCCHHHHHHH
Q 009517 388 ISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLF--PRIQLPEKAIKAA 464 (533)
Q Consensus 388 ~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~--~~~~~~~~~~~~~ 464 (533)
....+++..+|+. ..+ -++...++++++.+.+++.++++ |++... +.....+ .-+..|.+
T Consensus 245 v~~i~aL~~al~~----------i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~-~~~~~s~tvta~~~P~g----- 307 (383)
T COG0075 245 VNLIYALREALDL----------ILEEGLEARIARHRRLAEALRAGLEAL-GLELFA-DPERRSPTVTAIKVPEG----- 307 (383)
T ss_pred HHHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCcccc-CcccCCCceEEEECCCC-----
Confidence 6666777666642 223 36788889999999999999999 887765 2222221 11334442
Q ss_pred HhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c-CCcCcHHHHHHHHHHHHHHH
Q 009517 465 EAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L-PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 465 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~-~~~e~i~~~~~~l~~~l~~~ 527 (533)
.++.... ..+++++|+.+.+|..-. ...+|||+. + .+.+++..++.+|..+++++
T Consensus 308 ----~~~~~~~-~~~~~~~g~~i~gg~~~l---~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 308 ----VDDKKVR-RALLKEYGVEIAGGQGPL---KGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred ----CCcHHHH-HHHHHhCCEEeccccccc---CccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 2322333 378888899999876532 223999999 3 78889999999999999875
No 280
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=4.9e-19 Score=182.91 Aligned_cols=155 Identities=19% Similarity=0.231 Sum_probs=125.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch----HHHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~ 244 (533)
...|.+.+|++.+ .+..++++|+++|+..++..++ ++||+|+++.+.|+.. ...+...|++++.++.
T Consensus 66 ~~~Le~~lA~leg--------~~~al~~~sG~~Ai~~al~~ll-~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALEG--------GIGALAVSSGQAAITYSILNIA-SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 5678888888864 4578899999999999998887 7999999999988753 3445668999988875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
.|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.. +. ...
T Consensus 137 -------~d~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~-~~~ 195 (431)
T PRK08248 137 -------SDPENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PY-LLR 195 (431)
T ss_pred -------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cc-cCC
Confidence 278999999876 7999999999999999999 78999999999999999999863 11 111
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
++ ++ ..| +++.|++|.+ |.+|.++|++++
T Consensus 196 pl-----~~---gaD---ivv~S~tK~l-gg~g~~~Gg~v~ 224 (431)
T PRK08248 196 PI-----EH---GAD---IVVHSATKFI-GGHGTSIGGVIV 224 (431)
T ss_pred hh-----Hc---CCC---EEEEcCcccc-CCCCCceEEEEE
Confidence 11 11 234 7889999999 668999999877
No 281
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.86 E-value=2.4e-19 Score=188.56 Aligned_cols=333 Identities=13% Similarity=0.110 Sum_probs=209.3
Q ss_pred CHHHHHHHHHHHhcCCCCCcccc---CCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH--HHHhccCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAY---SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM--MQLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y---~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~--~~~l~~~~g 215 (533)
|+.+++++.+.... . ..+.| ...+|..+++.++++++.+.+|.+ ...+..++|+.+.+..+ ++.+..++|
T Consensus 83 ~p~i~~~~~~~~~~-~--~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~~G 157 (481)
T PRK04366 83 NPKINEKVARLPGF-A--ELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEARG 157 (481)
T ss_pred CHHHHHHHHhCcch-h--cCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhccC
Confidence 67788887765211 1 35678 457899999999999999998853 34555566666555533 332222567
Q ss_pred C----eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 216 D----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 216 d----~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
| +|+++.|.|+.|...+...|++++.++++. ++.+|+++|++++++ ++++|++++|+ |||++ .++
T Consensus 158 d~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~--~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~~d 226 (481)
T PRK04366 158 DTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE--DGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--ERN 226 (481)
T ss_pred cCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC--CCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--chH
Confidence 6 999999999999999999999999999853 568999999999976 79999999998 99965 346
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC---CCeeEEEEEecC
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC---GKRGGYMEVTGF 368 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~---G~riG~v~~~~~ 368 (533)
+++|+++|+++|+++++|.++..-.. +.. +. .++ .-| +++.+.+|.|++.. |-.+|++.+
T Consensus 227 l~eI~~~a~~~gal~iVD~a~~~~~~-g~~---~~----~~~---GaD---~~~~~~hK~l~~P~g~Ggp~~G~l~~--- 289 (481)
T PRK04366 227 ILEIAEIVHEAGGLLYYDGANLNAIL-GKA---RP----GDM---GFD---VVHLNLHKTFSTPHGGGGPGSGPVGV--- 289 (481)
T ss_pred HHHHHHHHHHcCCEEEEEecChhhhc-ccC---Cc----ccc---CCC---EEEEechhhcCCCCCCCCCCeeeeee---
Confidence 99999999999999999999853111 110 11 111 234 77889999984221 345778776
Q ss_pred CHHHHHHHHHh------h-------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 009517 369 SAEVREQIYKV------A-------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428 (533)
Q Consensus 369 ~~~~~~~l~~~------~-------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (533)
.+++...+... . . ..+.++.+...++...+.. .-.+-++++.++..++.++
T Consensus 290 ~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~---------~G~~Gl~~~a~~~~~~a~~ 360 (481)
T PRK04366 290 KEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRS---------LGAEGLREVSEDAVLNANY 360 (481)
T ss_pred hhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH
Confidence 66665554200 0 0 0011122222222222210 0112244555666777888
Q ss_pred HHHHHhcCCCceEecCCceeEEec--ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 429 LEDAFNSLEGITCNKAEGAMYLFP--RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 429 l~~~L~~~~g~~~~~~~gg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
+++.|+++..+.+..+...-+++- .+..+ +. +...+ .+.|.++||.+. +..|. ....+.+|+++
T Consensus 361 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~-~~~~v-~~~L~~~Gi~~~-~~~~p-~~~~~~l~is~ 426 (481)
T PRK04366 361 LKARLKDIYDLPYDRPCMHEFVLSGKKLKET----------GV-RTLDI-AKRLLDYGFHPP-TIYFP-LIVPEALMIEP 426 (481)
T ss_pred HHHHhHhhCcccCCCCeeEEEEEECcccccc----------CC-CHHHH-HHHHHHCCccCC-ccccc-cccCCeEEEcc
Confidence 999998752332211111112221 01110 11 12333 355667898755 22221 11133899999
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 507 L--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
. .++++|+++++.|+++.++..+
T Consensus 427 ~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 427 TETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6 7889999999999999887654
No 282
>PRK05939 hypothetical protein; Provisional
Probab=99.86 E-value=5e-19 Score=181.21 Aligned_cols=154 Identities=16% Similarity=0.169 Sum_probs=122.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLD 245 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~ 245 (533)
..+|.++++++.+ .+..+++++++.|+..++..++ ++||+|+++++.|+.+.. .+...|++++.++..
T Consensus 49 ~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all-~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~ 119 (397)
T PRK05939 49 TAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLL-RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT 119 (397)
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHc-CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC
Confidence 3488888888864 2345666667899999999888 899999999999987543 456679999888752
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-cccCCCCcc
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN-VYVPEKKFH 324 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~-~~~~~~~~~ 324 (533)
|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|... .+.+.
T Consensus 120 -------d~e~l~~~l~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~~~---- 179 (397)
T PRK05939 120 -------DVQNVAAAIRP------NTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPWLFRPK---- 179 (397)
T ss_pred -------CHHHHHHhCCC------CCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCcccccccCcc----
Confidence 78999999976 8999999999999999855 999999999999999999998532 12110
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
..+..|++.|+||.+ +..|.++|++++
T Consensus 180 -------------~~gaDivv~S~sK~~-~g~g~~igg~v~ 206 (397)
T PRK05939 180 -------------DVGASLVINSLSKYI-AGHGNALGGAVT 206 (397)
T ss_pred -------------ccCCEEEEecCeecc-cCCCCeEEEEEe
Confidence 112348899999999 558999999876
No 283
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.86 E-value=6.6e-19 Score=180.27 Aligned_cols=194 Identities=17% Similarity=0.257 Sum_probs=146.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
..+.++++.+.+.. ...| |..++++++++++.+.+| .+++++++|+++|+.+++..+..++||+|++
T Consensus 10 ~~~~~~~~~~~l~~-----~~~~----g~~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv 76 (375)
T PRK11706 10 VGTELDYIQQAMSS-----GKLC----GDGGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIM 76 (375)
T ss_pred CHHHHHHHHHHHHc-----CCcc----CCCHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEE
Confidence 45567777777664 1122 233566667666666545 4689999999999999887663278999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|..+...+...|++++.++++++ +|.+|++++++++++ ++++|+++| +||...+ +++|.++|+
T Consensus 77 ~~~t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~------~tk~i~~~~---~~G~~~~---~~~i~~la~ 143 (375)
T PRK11706 77 PSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITP------KTRAIVPVH---YAGVACE---MDTIMALAK 143 (375)
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCC------CCeEEEEeC---CCCCccC---HHHHHHHHH
Confidence 999999999999999999999999864 688999999999976 789998764 6898766 789999999
Q ss_pred HcCCEEEEcccccccc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 301 KEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
++|++||+|++|+.+. +.+ .+.. .+ .+ +.+.||+ |.+ + +|.+.+++.. ++++.+.+.
T Consensus 144 ~~~i~vIeD~a~a~g~~~~~-~~~g---~~--------~~---~~~~Sf~~~K~l-~-~g~gG~~~~~---~~~~~~~~~ 203 (375)
T PRK11706 144 KHNLFVVEDAAQGVMSTYKG-RALG---TI--------GH---IGCFSFHETKNY-T-AGEGGALLIN---DPALIERAE 203 (375)
T ss_pred HcCCEEEEECccccccccCC-eeee---cC--------cC---EEEEeCCCCccc-c-ccCCeEEEEC---CHHHHHHHH
Confidence 9999999999998765 332 1111 10 12 3344444 998 4 5888888765 888888776
Q ss_pred Hhh
Q 009517 378 KVA 380 (533)
Q Consensus 378 ~~~ 380 (533)
.+.
T Consensus 204 ~~~ 206 (375)
T PRK11706 204 IIR 206 (375)
T ss_pred HHH
Confidence 665
No 284
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=6.4e-19 Score=181.89 Aligned_cols=155 Identities=18% Similarity=0.198 Sum_probs=121.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~ 244 (533)
..+|++++|++.+ .+..+++++|++|+..++..++ ++||+|+++.+.|.+....+.. .|.++..++
T Consensus 60 ~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~-~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d- 129 (425)
T PRK06084 60 NDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIA-EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA- 129 (425)
T ss_pred HHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC-
Confidence 5688888888864 3456778888899999999988 7999999999999864444432 455555554
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
..|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..... . .+
T Consensus 130 ------~~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~-~-~p-- 190 (425)
T PRK06084 130 ------HDDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL-C-RP-- 190 (425)
T ss_pred ------CCCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-C-Ch--
Confidence 2389999999987 7999999999999999998 89999999999999999999974322 1 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+ ++ ..| |++.|++|.+ +.+|.++|.+++
T Consensus 191 ----~--~~---gaD---ivv~S~tK~l-~G~g~~~gG~v~ 218 (425)
T PRK06084 191 ----F--EH---GAD---IVVHSLTKYI-GGHGTSIGGIVV 218 (425)
T ss_pred ----h--hc---CCC---EEEECchhcc-cccccceeEEEE
Confidence 1 11 234 8899999999 558899988776
No 285
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.85 E-value=7.8e-20 Score=183.17 Aligned_cols=338 Identities=16% Similarity=0.168 Sum_probs=219.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~ 214 (533)
.+++.+++.+|+.+.+......+.... ..+|-+.+++..-+ -+-++|++++||++|++.+++..+. +|
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~-----~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p 135 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPE-----GGLDHVFFTDSGSEAVETALKMALQYWRARGQP 135 (449)
T ss_pred CHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCC-----CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 488999999999986431112222222 44555555555310 1257899999999999999998752 24
Q ss_pred C-CeEEEcCCcCcchHHHHHHhCC--------------eEEEEecCC---CCCCC-------CCHHHHHHHHHHHHhcC-
Q 009517 215 N-DGILCPIPQYPLYSASIALHGG--------------TLVPYYLDE---ATGWG-------LETSEVKKQLEAAKAKG- 268 (533)
Q Consensus 215 g-d~Vlv~~p~~~~~~~~~~~~g~--------------~~~~v~~~~---~~~~~-------ld~~~l~~~i~~~~~~g- 268 (533)
+ .+++.-..+|++-.......|. .+..++... .+.++ -..++|++.|..+ |
T Consensus 136 ~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g~ 212 (449)
T COG0161 136 QRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---GP 212 (449)
T ss_pred cceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---Cc
Confidence 3 3488888899875443333322 111111111 00001 1245677777664 4
Q ss_pred CCeeEEEEeCCCCC-Ccc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEe
Q 009517 269 ITVRALVVINPGNP-TGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (533)
Q Consensus 269 ~~~~~iil~~p~NP-tG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 346 (533)
.++.++|++....- +|+ ++++..|+++.++|++||+++|+||+-++|..+|. .+..+..++.|| +-
T Consensus 213 ~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~-------~FA~e~~gi~PD-----i~ 280 (449)
T COG0161 213 ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK-------MFACEHAGIVPD-----IL 280 (449)
T ss_pred ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch-------hhhhhhcCCCCC-----ee
Confidence 36777777765554 776 56666799999999999999999999999888775 233444445788 66
Q ss_pred cCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHh------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHH
Q 009517 347 SVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (533)
Q Consensus 347 S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 419 (533)
+++|.+.| | +++|.+++ .+++.+.+..- +..|++++|++++++.+.|+. .+ .+.+.
T Consensus 281 ~~aKGLT~--GY~Pl~a~l~---~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i-----------~e-~e~l~ 343 (449)
T COG0161 281 CLAKGLTG--GYLPLSAVLT---SDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDI-----------LE-EEDLL 343 (449)
T ss_pred eecccccc--cchhhHhHhh---hHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHH-----------HH-hcCHH
Confidence 78998853 5 89999888 89998888764 236799999999999888741 11 24455
Q ss_pred HHHHHHHHHHHHHHhc-C---CCceEecCCceeEEecccCCCHHHHHHHHhcCC-CChHHHHHHHHHccceEEEcCCCCC
Q 009517 420 SSLARRAKTLEDAFNS-L---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKT-VPDAFYCRRLLNATGIVLVPGSGFG 494 (533)
Q Consensus 420 ~~~~~~~~~l~~~L~~-~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gV~v~pg~~f~ 494 (533)
++.++...++.+.|.+ + |.+.-++..|.+... .+..+.+ .+... ..-...+...+.++|++++|. |
T Consensus 344 ~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~i-Elv~d~~-----t~~~f~~~~~~~~~~~~~e~Gl~iRp~---g 414 (449)
T COG0161 344 ERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAI-ELVADKA-----TKTPFEARVGARVRAAALERGLLIRPL---G 414 (449)
T ss_pred HHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEE-EEecccc-----cccchhhhHHHHHHHHHHHCCeEEeec---C
Confidence 6666666777777765 3 456667777755442 2321110 00000 001223456667899999984 3
Q ss_pred CCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 495 QVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 495 ~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
. .+-+++ .+++++|+++++++.+++++....
T Consensus 415 ~-----~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 415 D-----VIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred C-----EEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1 566666 389999999999999999987643
No 286
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=2.5e-19 Score=183.67 Aligned_cols=216 Identities=13% Similarity=0.100 Sum_probs=156.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~v~~ 244 (533)
..+|.+.+|++.+ .+..+++++|+.|+.+++.+++ .+||+|+++.++|.+-... +...|+++..+..
T Consensus 63 v~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all-~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNIC-SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 6788888888864 3458889999999999999888 8999999999999865554 6778999888853
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
.+|++.++++|++ +||+|++++|+||++.+++ +++|+++|+++|+++|+|++|..-.+ .
T Consensus 134 ------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~------~ 192 (432)
T PRK06702 134 ------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL------C 192 (432)
T ss_pred ------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh------C
Confidence 4689999999987 8999999999999999999 99999999999999999999852111 0
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCC----CCCCCee-----EEEEEecCCHHHH---------------------H
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYY----GECGKRG-----GYMEVTGFSAEVR---------------------E 374 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~----gl~G~ri-----G~v~~~~~~~~~~---------------------~ 374 (533)
. .+ +. ..| |++.|+||.++ +++|.++ +|... .+.++. .
T Consensus 193 ~--pl--~~---GAD---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
T PRK06702 193 Q--AF--EH---GAN---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNG--KYPELVEPDPSYHGVSYVQNFGAAAYIV 260 (432)
T ss_pred C--hh--hc---CCC---EEEEccccccCCCcceeceEEEeCCCcccccc--cccccccccccccccchhhccchhhHHH
Confidence 0 01 11 234 88999999543 3444444 33322 111211 1
Q ss_pred HH--HHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 375 QI--YKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 375 ~l--~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.. ........+.+++.+..+...|+. +..+.++..++...+.+.|++.|.+.
T Consensus 261 ~~~~~~~~~~g~~~sp~~a~l~~rgL~T--------------l~lR~~r~~~Na~~la~~L~~~p~V~ 314 (432)
T PRK06702 261 KARVQLLRDYGNCMSPFNAYISNIGLET--------------LHLRMERHSENALAVAKWLADHERIE 314 (432)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHhccCc--------------HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 11 112234567788888888777752 33444555678888999998876654
No 287
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.85 E-value=6.1e-19 Score=180.70 Aligned_cols=313 Identities=16% Similarity=0.206 Sum_probs=213.6
Q ss_pred CCHHHHHHHHHHHhcCCCCC-ccccCCC----cccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHh---
Q 009517 140 FSADSIERAWQILDQIPGRA-TGAYSHS----QGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLL--- 210 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~-~~~Y~~~----~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l--- 210 (533)
.|+.|++++.+.+.+..... ...+... .-+.+.|+.++++++ .++ ++|++++|+++++..++..+
T Consensus 11 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~~~~~t~a~~~~~~~l~~~ 84 (371)
T PF00266_consen 11 MPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVFTSNGTEALNAVASSLLNP 84 (371)
T ss_dssp -BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Cccccccccccccchhhhhhhhccccc
Confidence 48999999988876532211 0111111 123466777777765 556 78999999999999999999
Q ss_pred ccCCCCeEEEcCCcCcchH----HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 211 IRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 211 ~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
. ++|++|++.+-.|++.. .+.+..|+++..++.+... .+|+++++++|++ ++++|++++.+|-||+.
T Consensus 85 ~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~--~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~ 155 (371)
T PF00266_consen 85 L-KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGG--SLDLEDLEEALNP------DTRLVSISHVENSTGVR 155 (371)
T ss_dssp G-TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTS--SCSHHHHHHHHHT------TESEEEEESBETTTTBB
T ss_pred c-ccccccccccccccccccccccccccchhhhccccccccc--hhhhhhhhhhhcc------ccceEEeecccccccEE
Confidence 5 78999999998888755 3344679999999987543 7899999999976 89999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
.+ +++|.++|+++|+++++|.+++- |..+ ..+ .++ +.| +++.|..| |.|.+| +|++.+
T Consensus 156 ~p---i~~I~~~~~~~~~~~~vD~~~~~----g~~~-id~----~~~---~~D---~~~~s~~K-l~gp~G--~g~l~v- 213 (371)
T PF00266_consen 156 NP---IEEIAKLAHEYGALLVVDAAQSA----GCVP-IDL----DEL---GAD---FLVFSSHK-LGGPPG--LGFLYV- 213 (371)
T ss_dssp SS---HHHHHHHHHHTTSEEEEE-TTTT----TTSS---T----TTT---TES---EEEEESTS-TTSSST--EEEEEE-
T ss_pred ee---eceehhhhhccCCceeEechhcc----cccc-ccc----ccc---ccc---eeeecccc-cCCCCc--hhhhee-
Confidence 99 99999999999999999999875 2211 111 111 233 67889999 767666 588877
Q ss_pred cCCHHHHHHHHHhhhc----------------------cccCChHHHHHHHHHcCCCCCCChhHHHH-HHHHHHHHHHHH
Q 009517 367 GFSAEVREQIYKVASV----------------------NLCSNISGQILASLVMSPPKVGDESYESY-CAERDGILSSLA 423 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~~----------------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~ 423 (533)
+++.++.+.+.... ..+++.....++..+++ .+ ...++++.++..
T Consensus 214 --~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~----------~~~~~g~~~i~~~~~ 281 (371)
T PF00266_consen 214 --RPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALK----------LLEEIGIERIRERIR 281 (371)
T ss_dssp --EHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHH----------HHHHHHHHHHHHHHH
T ss_pred --hhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHh----------hhhccccccchhhhh
Confidence 88888887532210 01345555555555552 12 223567778888
Q ss_pred HHHHHHHHHHhcCCCceEecC-----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC--
Q 009517 424 RRAKTLEDAFNSLEGITCNKA-----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-- 496 (533)
Q Consensus 424 ~~~~~l~~~L~~~~g~~~~~~-----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-- 496 (533)
+..+++.+.|.+++++.++.| .+++..+ .++ . . +... +.+.|+++||.+..|..+...
T Consensus 282 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~-~~~--~----------~-~~~~-~~~~L~~~~I~~~~G~~~~~~~~ 346 (371)
T PF00266_consen 282 ELAEYLREALEELPGIEVLGPDDEPRRPSIVSF-NLP--G----------S-DADD-VVKYLEERGIAVSTGSACAGPSL 346 (371)
T ss_dssp HHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEE-EET--T----------S-SHHH-HHHHHHHHTEEEEESTTTCHHHH
T ss_pred hHHHHHHhhhhcCCceeEeeecccccccceEEE-eec--C----------C-CHHH-HHHHHhhcCEEEeccCcccHHHH
Confidence 889999999999988777543 2444333 122 1 1 1223 446667779999997765400
Q ss_pred ---CCCceEEEEec--CCcCcHHHH
Q 009517 497 ---PGTWHFRCTIL--PQEDKIPAI 516 (533)
Q Consensus 497 ---~g~~~iRis~~--~~~e~i~~~ 516 (533)
.-.+.||+|+. .+++||+++
T Consensus 347 ~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 347 DILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHhCCCCEEEEeccCCCCHHHHhhC
Confidence 01149999996 788888764
No 288
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.85 E-value=2.2e-18 Score=176.99 Aligned_cols=317 Identities=17% Similarity=0.150 Sum_probs=204.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
+.+.++++.+.+.. .. |....+..+|+++++++++. ++.++++|+++|+..++.++ + ++||+|+
T Consensus 9 ~~~~~~~v~~~~~~----~~--~~~g~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~-~~Gd~Vi 73 (380)
T TIGR03588 9 DQDDIDAVVEVLKS----DF--LTQGPTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGV-GPGDRVW 73 (380)
T ss_pred CHHHHHHHHHHHhc----CC--ccCChhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCC-CCCCEEE
Confidence 56678888887765 12 33334478999999999852 35667778999999999998 6 7999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|..+...+...|++++.++++++ ++.+|++++++++++. ..+++++|+++| ++|...+ +++|+++|
T Consensus 74 v~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~--~~~~t~~v~~~~---~~G~~~~---~~~i~~l~ 144 (380)
T TIGR03588 74 TTPITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAA--KGKLPKAIVPVD---FAGKSVD---MQAIAALA 144 (380)
T ss_pred eCCcchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcc--cCCCceEEEEeC---CCCccCC---HHHHHHHH
Confidence 9999999999999999999999999754 5789999999999831 001788888554 6888776 89999999
Q ss_pred HHcCCEEEEccccccc-cccCCCCcccHHHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 300 KKEGLVLLADEVYQEN-VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++||++||+|++++.. .+.+. +... . . ..| +.+.||+ |.+ + .| ..|+++. .++++.+.+
T Consensus 145 ~~~~~~lI~D~a~a~g~~~~~~-~~g~----~-~----~~d---~~~~S~~~~K~~-~-~~-~GG~v~~--~~~~~~~~~ 206 (380)
T TIGR03588 145 KKHGLKIIEDASHALGAEYGGK-PVGN----C-R----YAD---ATVFSFHPVKII-T-TA-EGGAVTT--NDEELAERM 206 (380)
T ss_pred HHcCCEEEEECCCcccCccCCE-eCCC----c-c----ccc---eEEEecCCCCcc-c-cc-CceEEEE--CCHHHHHHH
Confidence 9999999999999753 23331 1111 0 0 123 5677776 877 3 23 5777776 367888777
Q ss_pred HHhhhccccC--------------------------ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 377 YKVASVNLCS--------------------------NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLE 430 (533)
Q Consensus 377 ~~~~~~~~~~--------------------------~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 430 (533)
+.+....... +.+..+++... ++.++.+.++-+++.+++.
T Consensus 207 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q--------------L~~l~~~~~~r~~~~~~~~ 272 (380)
T TIGR03588 207 RLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ--------------LKKLDRFVAKRREIAARYD 272 (380)
T ss_pred HHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHH
Confidence 6654311110 11111111111 2234555556666777888
Q ss_pred HHHhcCCCceEecC-Cc---eeEEe-cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCC-------C--C
Q 009517 431 DAFNSLEGITCNKA-EG---AMYLF-PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFG-------Q--V 496 (533)
Q Consensus 431 ~~L~~~~g~~~~~~-~g---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-------~--~ 496 (533)
+.|.+++++....+ .+ ..+.+ +.+.... +. ....+ .+.|+++||.+.+....- . .
T Consensus 273 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~-~r~~l-~~~L~~~gI~~~~~~~~~~~~~~~~~~~~ 341 (380)
T TIGR03588 273 RLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEF---------GC-TRKEV-FEALRAAGIGVQVHYIPVHLQPYYRQGFG 341 (380)
T ss_pred HHhcCCCCccCCCCCCCCEeEEEEEEEEECCcC---------CC-CHHHH-HHHHHHCCCCcccCCcccccChhhhccCC
Confidence 89988876664332 11 22222 1222100 01 12333 355678899887432110 0 0
Q ss_pred CC---------CceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 497 PG---------TWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 497 ~g---------~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
.. .+.|++.+. .++++++..++.|++++
T Consensus 342 ~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 342 DGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred cCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 00 136777774 78889999998888764
No 289
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.85 E-value=1.5e-18 Score=177.05 Aligned_cols=212 Identities=15% Similarity=0.142 Sum_probs=145.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH----HHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~ 244 (533)
...|+++++++.+ .+..+++++|+.|+..++. ++ ++||+|++++|.|++.. ..+...|+++..++.
T Consensus 52 ~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l~-~l-~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEG--------GVKGFAFASGLAGIHAVFS-LF-QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHHH-Hc-CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 6788888888864 2334555556678887775 55 79999999999997643 344556888777753
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
.|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .+.
T Consensus 122 -------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~--~p~- 182 (380)
T PRK06176 122 -------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ--NPL- 182 (380)
T ss_pred -------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC--Ccc-
Confidence 379999999876 7999999999999999988 889999999999999999999864332 111
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~ 402 (533)
++ ..| +++.|++|.++| +| .-.|++++ .++++.+.+...+. .....++...+.+...++
T Consensus 183 -------~~---gaD---ivv~S~tK~l~g-~~d~~gG~vv~--~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~--- 243 (380)
T PRK06176 183 -------LL---GAD---IVVHSGTKYLGG-HSDVVAGLVTT--NNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK--- 243 (380)
T ss_pred -------cc---CCC---EEEecCceeccC-CccceeeEEEe--cHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC---
Confidence 11 234 789999999954 44 45676665 35667777765554 233334544444433332
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.+....++..++...+.+.|++.|.+
T Consensus 244 -----------tl~~R~~~~~~~a~~la~~L~~~p~v 269 (380)
T PRK06176 244 -----------TLGLRMEAHQKNALCVAEFLEKHPKV 269 (380)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 12223334445566677777766544
No 290
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.85 E-value=3.5e-19 Score=170.62 Aligned_cols=334 Identities=16% Similarity=0.184 Sum_probs=222.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vl 219 (533)
+|++++++.+++..... ....|.... ..+|-++++..+- -+-+.++++|+++||.+++++.+....| -.|+
T Consensus 68 hP~v~~a~~kQl~~l~H-~t~~~~~~p-i~~~Ae~L~s~~P------~~l~~vfF~nsGsEANelal~mar~Yt~~~diI 139 (442)
T KOG1404|consen 68 HPDVVAAAVKQLKKLYH-TTSGYLNPP-IHDLAEALVSKLP------GDLKVVFFVNSGSEANELALKMARLYTGNLDII 139 (442)
T ss_pred ChHHHHHHHHhhhhhEE-eeccccCCc-HHHHHHHHHHhCC------CCceEEEEecCCchHHHHHHHHHHHhcCCceEE
Confidence 37899999998876544 355666555 6788777777763 2344689999999999999998753444 4577
Q ss_pred EcCCcCcchHHHHHH-hCCeEEEEecCCCC--------------CCCCC-----H----HHHHHHHHHHHhcCC-CeeEE
Q 009517 220 CPIPQYPLYSASIAL-HGGTLVPYYLDEAT--------------GWGLE-----T----SEVKKQLEAAKAKGI-TVRAL 274 (533)
Q Consensus 220 v~~p~~~~~~~~~~~-~g~~~~~v~~~~~~--------------~~~ld-----~----~~l~~~i~~~~~~g~-~~~~i 274 (533)
....+|++....... -|......++.... -|+=+ - +++++.|... ++ .+.++
T Consensus 140 a~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~---~~~~vAaf 216 (442)
T KOG1404|consen 140 ARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYD---GPETVAAF 216 (442)
T ss_pred EeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhc---CCCceeEE
Confidence 777888875544332 23333332222110 01111 2 3444444432 22 35666
Q ss_pred EEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCC
Q 009517 275 VVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (533)
Q Consensus 275 il~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 353 (533)
|.+..+.-.|+ .+++..+++..++|+++|.+.|.||++++|.+.| .++.+.+ .++ -|| |.|++|.+
T Consensus 217 iaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG--~~wgfe~--h~v---~PD-----IvTmAKgi- 283 (442)
T KOG1404|consen 217 IAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG--HMWGFES--HGV---VPD-----IVTMAKGI- 283 (442)
T ss_pred EeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc--ccccccc--cCC---Ccc-----HHHHHhhc-
Confidence 76677777786 5677789999999999999999999999988877 3555543 222 577 78999999
Q ss_pred CCCCCeeEEEEEecCCHHHHHHHHHhh-h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 354 GECGKRGGYMEVTGFSAEVREQIYKVA-S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLED 431 (533)
Q Consensus 354 gl~G~riG~v~~~~~~~~~~~~l~~~~-~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 431 (533)
| .|+++|.++. .+|+++-+.+-. . .|++++|++++++.++|+- .+ .+++.+..++...+|.+
T Consensus 284 G-nG~Pl~AVvt---t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~V-----------ik-ee~LqE~aa~vG~yl~~ 347 (442)
T KOG1404|consen 284 G-NGFPLGAVVT---TPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKV-----------IK-EENLQENAAEVGSYLLE 347 (442)
T ss_pred c-CCCcceeeec---CHHHHHHHHhccccccccCCCchhHHHHHHHHHH-----------HH-HHhHHHHHHHHHHHHHH
Confidence 5 6999999998 999999887755 3 7899999999999999852 22 35566667777788888
Q ss_pred HHhcC----CCceEecCCceeEEecccCCCHHHHHHHHhcC-CCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 432 AFNSL----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEK-TVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 432 ~L~~~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
.|.++ |-+.-++..|-|.- +++-. ++.+... ......++.+.+++.|+++--|..+|. .|||++
T Consensus 348 ~l~~l~d~h~iIGdVRG~GLm~G---vE~V~---dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~-----vfriaP 416 (442)
T KOG1404|consen 348 KLAALKDKHPIIGDVRGRGLMLG---VELVS---DKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN-----VFRIAP 416 (442)
T ss_pred HHHHHhhcCCceeecccceeEEE---EEEec---ccCCCCCcchHHHHHHHHHHHHhCeeeecccccce-----EEEecC
Confidence 88775 44666777775433 22111 0000000 011223345667889999977777664 899999
Q ss_pred --cCCcCcHHHHHHHHHHHHHH
Q 009517 507 --LPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 507 --~~~~e~i~~~~~~l~~~l~~ 526 (533)
++|.++++-+++.. +++..
T Consensus 417 PlciT~edi~f~~~~~-~~~~~ 437 (442)
T KOG1404|consen 417 PLCITKEDIDFAVEYF-EVLTS 437 (442)
T ss_pred CeeccHHHHHHHHHHH-HHHhH
Confidence 48999996665544 34443
No 291
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.84 E-value=1.6e-18 Score=179.58 Aligned_cols=318 Identities=14% Similarity=0.089 Sum_probs=195.5
Q ss_pred CHHHHHHHHHHHhcCCCCCc-cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC---C
Q 009517 141 SADSIERAWQILDQIPGRAT-GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN---D 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g---d 216 (533)
|..+.+++.+.+........ ..|....+...+.+++.+ + +..| .++++|++|+|+++++..++..+. .++ +
T Consensus 40 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g--~~~~~v~~~~~~t~~l~~~~~~~~-~~~~~~~ 114 (406)
T TIGR01814 40 PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG--AKEDEVVVMNTLTINLHLLLASFY-KPTPKRY 114 (406)
T ss_pred cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--CCCCcEEEeCCchHHHHHHHHHhc-CCcCCcc
Confidence 67777777766543211001 111101112222222222 1 3345 568899999999999999999875 554 3
Q ss_pred eEEEcCCcCcchHH----HHHHhCCeE----EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 217 GILCPIPQYPLYSA----SIALHGGTL----VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~----~~~~~g~~~----~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
.|++....|+.... .++..|+++ +.++.+ .++.+|++.+++.++.. ++++++|++++++|.||.+++
T Consensus 115 ~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~ 189 (406)
T TIGR01814 115 KILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR--EEETLRLEDILDTIEKN---GDDIAVILLSGVQYYTGQLFD 189 (406)
T ss_pred EEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC--CCCccCHHHHHHHHHhc---CCCeEEEEEeccccccceecC
Confidence 68888888987333 345568876 344443 24567999999988642 237999999999999999998
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|+++|+++|+++++|++++. |..+ .++ .++ .-| +++.|..|++.|.|| .|.++.
T Consensus 190 ---~~~i~~~~~~~g~~~~vD~aq~~----G~~~-id~----~~~---gvD---~~~~s~hK~l~g~pG--~~l~v~--- 246 (406)
T TIGR01814 190 ---MAAITRAAHAKGALVGFDLAHAV----GNVP-LDL----HDW---GVD---FACWCTYKYLNAGPG--AGAFVH--- 246 (406)
T ss_pred ---HHHHHHHHHHcCCEEEEEccccc----CCcc-ccc----ccC---CCC---EEEEcCccccCCCCC--eEEEEe---
Confidence 99999999999999999999985 3222 111 111 234 778999998754456 332222
Q ss_pred CHHHHHHHHHhh-h-----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHH
Q 009517 369 SAEVREQIYKVA-S-----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (533)
Q Consensus 369 ~~~~~~~l~~~~-~-----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (533)
++. ...+.... . ...+++..+..++.++|+. +. ....+.++++..+
T Consensus 247 ~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~-------~~--~~g~~~i~~~~~~ 316 (406)
T TIGR01814 247 EKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDI-------FD--QAGMEALRKKSLL 316 (406)
T ss_pred hhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHH-------HH--hcCHHHHHHHHHH
Confidence 322 22222110 0 0123455565666656531 00 0124667777888
Q ss_pred HHHHHHHHHhcC----CCceEecCC-----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 425 RAKTLEDAFNSL----EGITCNKAE-----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 425 ~~~~l~~~L~~~----~g~~~~~~~-----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
..+++++.|+++ +|+.++.|. +++..+ ..|. ....+. +.|.++||.+..
T Consensus 317 l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~---~~~~------------~~~~~~-~~L~~~gi~v~~------ 374 (406)
T TIGR01814 317 LTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSL---THPV------------PGKAVF-QALIKRGVIGDK------ 374 (406)
T ss_pred HHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEE---EecC------------CHHHHH-HHHHHCCEEEec------
Confidence 888888888775 357766542 333332 2220 123333 445678998763
Q ss_pred CCCCceEEEEe-c--CCcCcHHHHHHHHHHHH
Q 009517 496 VPGTWHFRCTI-L--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 496 ~~g~~~iRis~-~--~~~e~i~~~~~~l~~~l 524 (533)
.+.+.||||+ . +++++|++++++|++++
T Consensus 375 -~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 375 -REPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred -cCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 1123899998 3 68899999999998764
No 292
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.84 E-value=9.2e-19 Score=181.34 Aligned_cols=324 Identities=12% Similarity=0.090 Sum_probs=205.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~ 214 (533)
++++++++.+++.+... ....+.......++-+.+++.. + -..+.|+++++|++|++.+++..+.. +
T Consensus 63 ~p~v~~ai~~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~----~--~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~ 135 (427)
T TIGR00508 63 HPRLNAAAQKQIDKMSH-VMFGGFTHKPAIELCQKLVKMT----P--NALDCVFLADSGSVAVEVALKMALQYWQAKGEK 135 (427)
T ss_pred CHHHHHHHHHHHHhcCC-ccccccCCHHHHHHHHHHHhhC----C--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCC
Confidence 68999999999886432 0111112222334444444432 2 22368999999999999999987521 2
Q ss_pred C-CeEEEcCCcCcchHHHHHHh-CCe-------------EEEEecCCCCCCC-----CCHHHHHHHHHHHHhcCCCeeEE
Q 009517 215 N-DGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEATGWG-----LETSEVKKQLEAAKAKGITVRAL 274 (533)
Q Consensus 215 g-d~Vlv~~p~~~~~~~~~~~~-g~~-------------~~~v~~~~~~~~~-----ld~~~l~~~i~~~~~~g~~~~~i 274 (533)
| .+|+....+|++....+... +.. +..++.. ...+. -|++++++.+... +.++.+|
T Consensus 136 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~~~l~~~---~~~vaav 211 (427)
T TIGR00508 136 NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLAKLMELH---SDEIAAV 211 (427)
T ss_pred CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHHHHHHhc---CCcEEEE
Confidence 3 67999999999875443332 211 0111110 00111 1456777777542 2367778
Q ss_pred EEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccC
Q 009517 275 VVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (533)
Q Consensus 275 il~~p-~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 352 (533)
+++.. ++-.|. .++.+.+++|.++|++||+++|+||++.++...|. ...... .++ .+| +.+++|++
T Consensus 212 ivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~--~~~~~~--~~v---~pD-----i~~~gK~l 279 (427)
T TIGR00508 212 ILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK--LFACEH--AGV---VPD-----ILCVGKAL 279 (427)
T ss_pred EEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--cchhhh--cCC---CCC-----EEEechhh
Confidence 77764 665665 56788999999999999999999999998766553 111111 122 566 33489999
Q ss_pred CCCCCC-eeEEEEEecCCHHHHHHHHHh------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 009517 353 YGECGK-RGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (533)
Q Consensus 353 ~gl~G~-riG~v~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (533)
+ .|+ .++.+++ ++++++.+... ...++..++++++++.++|+ ..+. +...++.+++
T Consensus 280 ~--gG~~p~~a~~~---~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~-----------~l~~-~~~~~~~~~~ 342 (427)
T TIGR00508 280 T--GGYMTLSATVT---TDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA-----------ILLE-GEWQKQVSAI 342 (427)
T ss_pred h--cCcccceEEEE---cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHH
Confidence 4 485 8898887 88998888642 23567789999999888874 1111 2345667777
Q ss_pred HHHHHHHHhcC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceE
Q 009517 426 AKTLEDAFNSL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHF 502 (533)
Q Consensus 426 ~~~l~~~L~~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~i 502 (533)
.++|++.|+++ +++.-++..|.+..+ .+..+. ....+. ..|.++||++.+. + +.+
T Consensus 343 ~~~l~~~L~~l~~~~~i~~vrg~G~~~~i-~~~~~~------------~~~~~~-~~l~~~Gv~~~~~---~-----~~l 400 (427)
T TIGR00508 343 ENQLKRELSPLRKNPVVKDVRVLGAIGVV-EMYKPV------------NVEELQ-KKFVEQGVWIRPF---G-----KLI 400 (427)
T ss_pred HHHHHHHHHHhhcCCCEEeEeccccEEEE-EECCcc------------CHHHHH-HHHHHCCeEEEec---C-----CEE
Confidence 77788887776 233344455655433 232111 123333 4456689999762 1 278
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 503 RCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 503 Ris~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
|+++. +++++|+++++++++++++
T Consensus 401 ~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 401 YVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 99886 8999999999999998864
No 293
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=1.4e-19 Score=178.88 Aligned_cols=226 Identities=19% Similarity=0.150 Sum_probs=154.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 248 (533)
+.++++.+|++++ . .+-+++++|+++++..++.+++ .+||+|+++.|+|..+...+...|++++.++.+...
T Consensus 61 i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~-~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 61 IKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVC-GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred HHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcC-CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 6788888998874 1 2334559999999999999998 899999999999999999999999999998876554
Q ss_pred CC----CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-ccccCCCCc
Q 009517 249 GW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE-NVYVPEKKF 323 (533)
Q Consensus 249 ~~----~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~ 323 (533)
+| .+|++.+++++++ .+++++|++++| ||||.+++ +++|+++|+++|+++|+||+|.. +.|.+..+
T Consensus 133 ~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~- 203 (294)
T cd00615 133 YYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILP- 203 (294)
T ss_pred ccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccC-
Confidence 43 6899999999975 236899999998 79999998 89999999999999999999964 44433211
Q ss_pred ccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh--ccccCChHHHHHHHHHcCCC
Q 009517 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~ 401 (533)
.+. . ..+..+++.|++|++ +|++.|+++...........+..... .+.+++.....++..++.
T Consensus 204 ~~~----~------~~~~div~~S~hK~l---~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~-- 268 (294)
T cd00615 204 SSA----A------MAGADIVVQSTHKTL---PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARA-- 268 (294)
T ss_pred cch----h------hcCCcEEEEchhccc---chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHH--
Confidence 111 1 112348899999986 48887655432111011222322222 233444444444444432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
...++-++..+++.++.+.+++.|+
T Consensus 269 --------~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 269 --------MMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred --------HHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 1112223445556666666666654
No 294
>PRK06149 hypothetical protein; Provisional
Probab=99.84 E-value=7.9e-19 Score=198.55 Aligned_cols=337 Identities=14% Similarity=0.126 Sum_probs=211.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vl 219 (533)
++++++++.+++..... ...|. .+....+++.+.+... -..+.++++++|++|++.+++..+...| .+|+
T Consensus 601 hp~v~~Ai~~q~~~l~~--~~~~~-----~~~~~elae~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii 671 (972)
T PRK06149 601 HPRLAAAAARQWSLLNT--NSRFH-----YAAVAEFSERLAALAP--DGLDTVFLVNSGSEANDLAIRLAWAASGRRDVV 671 (972)
T ss_pred CHHHHHHHHHHHHhccc--ccccc-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEE
Confidence 68899999999886422 11121 1233444554443321 1246899999999999999997652234 6789
Q ss_pred EcCCcCcchHHHHHHh-CC-------------eEEEEecCCC--CCCC-CC-----HHHHHHHHHHHHhcCCCeeEEEEe
Q 009517 220 CPIPQYPLYSASIALH-GG-------------TLVPYYLDEA--TGWG-LE-----TSEVKKQLEAAKAKGITVRALVVI 277 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~-g~-------------~~~~v~~~~~--~~~~-ld-----~~~l~~~i~~~~~~g~~~~~iil~ 277 (533)
...-+|++........ +. .+..++.... ..|. .+ .+++++.++.....+.++.+||++
T Consensus 672 ~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~E 751 (972)
T PRK06149 672 SVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICE 751 (972)
T ss_pred EEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEc
Confidence 9999999865332211 10 0122221110 0121 12 245555554433334467788877
Q ss_pred CCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC
Q 009517 278 NPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (533)
Q Consensus 278 ~p~NPtG-~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~ 356 (533)
......| +.++++.+++|.++|++||+++|+||++++|...|. .+..+.. .++.|| +.+|+|.++ .
T Consensus 752 pv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~-~~~a~e~-----~gv~PD-----ivt~gK~lg--~ 818 (972)
T PRK06149 752 PVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGH-YFWGFEQ-----QGVVPD-----IITMAKGMG--N 818 (972)
T ss_pred ccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCc-cchhhhh-----cCCCCC-----EEEeccccc--C
Confidence 6544445 577888899999999999999999999999766553 1222211 122678 458999994 4
Q ss_pred CCeeEEEEEecCCHHHHHHHHH--hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 357 GKRGGYMEVTGFSAEVREQIYK--VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 357 G~riG~v~~~~~~~~~~~~l~~--~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
|+++|++++ .+++++.+.. ....+++.++++++++.+.|+. .+ -+.+.+..+++.++|++.|+
T Consensus 819 G~Pl~av~~---~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~-----------i~-~e~l~~~~~~~G~~l~~~L~ 883 (972)
T PRK06149 819 GHPLGAVIT---RREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDV-----------LR-EEKLQENARRVGDHLKARLE 883 (972)
T ss_pred CeeeEEEEE---cHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHH-----------HH-hcCHHHHHHHHHHHHHHHHH
Confidence 899999998 8999988764 1224568899999999988841 11 13455566666677777776
Q ss_pred cC----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC-hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--
Q 009517 435 SL----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP-DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-- 507 (533)
Q Consensus 435 ~~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-- 507 (533)
++ |.+..++..|.|+.+ .+..... ....... ...++ ..+.++||++.|... ..+.+||.+.
T Consensus 884 ~l~~~~~~i~~vrG~Gl~~gv-el~~~~~-----~~~~~~~~~~~i~-~~l~~~Gvl~~~~g~-----~~~vl~~~Ppl~ 951 (972)
T PRK06149 884 ALADRHPLIGAVHGMGLYLGV-ELVRDRQ-----TLEPATEETAAIC-DRLLELGVIMQPTGD-----HLNILKIKPPLC 951 (972)
T ss_pred HHHHhCCCeEEEeecceEEEE-EEecCcc-----cCCCChHHHHHHH-HHHHhCCeEEeecCC-----CCCEEEEECCCc
Confidence 54 446667777766543 2210000 0000000 12333 445568999987321 1238999885
Q ss_pred CCcCcHHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~~ 526 (533)
+++++|++++++|++++++
T Consensus 952 it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 952 LDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999865
No 295
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.83 E-value=1.6e-18 Score=180.13 Aligned_cols=356 Identities=13% Similarity=0.087 Sum_probs=211.5
Q ss_pred HHHHHHHHHHhh-cCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHH--HHHHHHh
Q 009517 77 VSIAQRLQQELQ-TNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIE--RAWQILD 153 (533)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~--~~~~~~~ 153 (533)
+.++++...++. ||++ ++|+..|.... ..+++ ++++++ ++.+++.
T Consensus 30 i~~a~G~~l~D~~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~~~ai~~ql~ 77 (443)
T PRK08297 30 LERSQGSYLVDARTGRR------YLDMFTFFASS----------------------ALGMN----HPALADDPEFRAELG 77 (443)
T ss_pred EEeccCCEEEECCCCCE------eeecccCHhhh----------------------cCCCC----ChHHhhHHHHHHHHH
Confidence 467777777773 7777 77775553221 11111 578888 8888887
Q ss_pred cCCCC--CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------------C-CCeE
Q 009517 154 QIPGR--ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------------E-NDGI 218 (533)
Q Consensus 154 ~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------------~-gd~V 218 (533)
+.... ....|. .....+|-+.+++.. + +...++|+++++|+||++.+++..+.. + ..+|
T Consensus 78 ~l~~~~~~~~~~~-~~~~~~la~~l~~~~----~-p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~ki 151 (443)
T PRK08297 78 RAALNKPSNSDVY-TVEMARFVDTFARVL----G-DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKV 151 (443)
T ss_pred HhhhhccccCCcC-CHHHHHHHHHHHhhc----C-CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceE
Confidence 53200 011111 111333333333332 1 123469999999999999999988411 1 2579
Q ss_pred EEcCCcCcchHHHHHHh-CCeEE---EEecC-------CCCCC-----C---C------CHHHHHHHHHHHHhcCCCeeE
Q 009517 219 LCPIPQYPLYSASIALH-GGTLV---PYYLD-------EATGW-----G---L------ETSEVKKQLEAAKAKGITVRA 273 (533)
Q Consensus 219 lv~~p~~~~~~~~~~~~-g~~~~---~v~~~-------~~~~~-----~---l------d~~~l~~~i~~~~~~g~~~~~ 273 (533)
+....+|++....+... |.... .++.. +...+ . . +++.+++.+... +.++.+
T Consensus 152 i~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~iAa 228 (443)
T PRK08297 152 LHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH---PHDIAC 228 (443)
T ss_pred EEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC---CCcEEE
Confidence 99999999977654443 21110 00100 00000 0 0 234555666532 337888
Q ss_pred EEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccC
Q 009517 274 LVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (533)
Q Consensus 274 iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 352 (533)
||+...+...|. +++++.+++|.++|++||+++|+||++++|...|. +. ..+..++.|| +.+|+|.+
T Consensus 229 vI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~-----a~~~~gv~PD-----iv~~gK~l 296 (443)
T PRK08297 229 FIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGT--AW-----AYQQLGVRPD-----IVAFGKKT 296 (443)
T ss_pred EEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccch--HH-----HHHhcCCCCC-----EEEecccc
Confidence 888866655675 57888899999999999999999999999766553 11 1222233688 44689976
Q ss_pred CCCCCCeeEEEEEecCCHHHHHHHHH------hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 009517 353 YGECGKRGGYMEVTGFSAEVREQIYK------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (533)
Q Consensus 353 ~gl~G~riG~v~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (533)
+ +|.+++ ..++.+.+.. ....|++.++++++++.+.|+. .+ .+.+.++.+++.
T Consensus 297 -~-----~~a~l~---~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~-----------l~-~~~l~~~~~~~g 355 (443)
T PRK08297 297 -Q-----VCGIMA---GRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEV-----------IE-EDGLVENAARQG 355 (443)
T ss_pred -c-----ccceec---chHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHH-----------HH-hcCHHHHHHHHH
Confidence 3 233333 4443322211 1236788999999999888741 11 123455556666
Q ss_pred HHHHHHHhcC----CCce-EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCce
Q 009517 427 KTLEDAFNSL----EGIT-CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWH 501 (533)
Q Consensus 427 ~~l~~~L~~~----~g~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~ 501 (533)
+++.+.|+++ |.+. .+++.|.|+. +.+..+. ....++.. +.++||++.|+. .+.
T Consensus 356 ~~l~~~L~~l~~~~~~~~~~vrg~G~~~~-i~~~~~~------------~~~~~~~~-l~~~Gvl~~~~~-------~~~ 414 (443)
T PRK08297 356 EYLLARLEELAAEFPAVVSNVRGRGLMCA-FDLPTTA------------DRDEVIRR-LWEEGVLVLPCG-------ERS 414 (443)
T ss_pred HHHHHHHHHHHHHCCCcceeeeccceEEE-EEecCHH------------HHHHHHHH-HHHCCEEEecCC-------CCe
Confidence 6666666553 4343 5667765543 3333111 12234444 447899998732 126
Q ss_pred EEEEe--cCCcCcHHHHHHHHHHHHHHH
Q 009517 502 FRCTI--LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 502 iRis~--~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+||++ .+++++|++++++|+++++++
T Consensus 415 lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 415 IRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 88866 489999999999999998764
No 296
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.83 E-value=5.1e-19 Score=183.59 Aligned_cols=346 Identities=8% Similarity=0.035 Sum_probs=207.9
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++.+++++.+++.+.
T Consensus 33 ~~~~~~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~q~~~~ 80 (431)
T PRK06209 33 FIQRGSGAHVWDVDGNE------YIEYGMGLRAV----------------------GLGHA----YPPVVEAVREALQDG 80 (431)
T ss_pred EEEeccCCEEEeCCCCE------EEEccccccch----------------------hcCCC----CHHHHHHHHHHHHhC
Confidence 56777777777778888 77776554322 11111 689999999999873
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC-eEEEc-CCcCcchHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND-GILCP-IPQYPLYSASIA 233 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd-~Vlv~-~p~~~~~~~~~~ 233 (533)
. .|... ...+-.+|+.+.+... ..+.++++++|++|++.+++..+...|. +|+.. .-+|+++....
T Consensus 81 ~-----~~~~~---~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~- 148 (431)
T PRK06209 81 C-----NFTRP---SAIELDAAESFLELID---GADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWF- 148 (431)
T ss_pred c-----CCCCC---CHHHHHHHHHHHHhCC---ccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccc-
Confidence 2 22211 1222234444443221 2368999999999999999987633453 45544 33443321111
Q ss_pred HhCCeEE-----------EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 234 LHGGTLV-----------PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 234 ~~g~~~~-----------~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
+|.... .+.+. .-|++.+++.++.. ..++.+|++.... |...+.+.+++|.++|++|
T Consensus 149 -~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~---g~~~~~~~l~~l~~lc~~~ 216 (431)
T PRK06209 149 -IGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPAT---ADEPQDGFLHEVRRLCHEN 216 (431)
T ss_pred -cccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEcccc---CCCCCHHHHHHHHHHHHHc
Confidence 111100 01110 12789999988752 2256666665432 4478889999999999999
Q ss_pred CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH--HHH--
Q 009517 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ--IYK-- 378 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~--l~~-- 378 (533)
|+++|+||+++++.+.+. .. ....++.|| +.+|+|.++ .|+++|++++ ++++++. +..
T Consensus 217 g~lLI~DEv~tG~~~~~~----g~----~~~~gv~PD-----i~t~gK~lg--gG~p~~av~~---~~~i~~~~~~~~~~ 278 (431)
T PRK06209 217 GALFILDEMITGFRWHMR----GA----QKLYGIVPD-----LSCFGKALG--NGFAVSALAG---KREYMELGGLEHTD 278 (431)
T ss_pred CCEEEEEcccccCCcCcc----hh----hHHhCCCcc-----eeeehhhhc--CCcccEEEEE---HHHHHhhhcccccC
Confidence 999999999998754321 11 111112577 578999994 4899999998 8888876 311
Q ss_pred ---h--hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecCCceeE
Q 009517 379 ---V--ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKAEGAMY 449 (533)
Q Consensus 379 ---~--~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~gg~~ 449 (533)
. .++++++++++++++.+.|+. +++ +.+.++..++.+++++.|++ ++....++..|.+.
T Consensus 279 ~~~~~~~~~T~~~np~~~aaa~a~l~~-----------i~~-~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~ 346 (431)
T PRK06209 279 RERVFLLSTTHGAETHALAAAIATMAI-----------YRD-EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPC 346 (431)
T ss_pred CCCceeeccCCCCCHHHHHHHHHHHHH-----------Hhc-cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceE
Confidence 1 235677888898888887742 111 23445555556666666554 32222244444433
Q ss_pred EecccC-CCHHHHHHHHhcCCCCh---HHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 450 LFPRIQ-LPEKAIKAAEAEKTVPD---AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 450 ~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
.+.-+. .+.+ .... ..+..+ +.++||++. -++|+..+++++|++++++++++++
T Consensus 347 ~~~~~~~~~~~---------~~~~~~~~~~~~~-l~~~Gi~~p------------~l~is~~ht~~dId~~l~~l~~~l~ 404 (431)
T PRK06209 347 CLTYSTLDGNG---------QPSQAFRTLFLQE-TIRRGVLMP------------SLVVSYAHGDADIERTIDAVHGALG 404 (431)
T ss_pred EEEEecCCccc---------CCcHHHHHHHHHH-HHHCCcccc------------cccccccCCHHHHHHHHHHHHHHHH
Confidence 322111 1100 0011 123334 556899763 2477877999999999999999999
Q ss_pred HHHH
Q 009517 526 NFMD 529 (533)
Q Consensus 526 ~~~~ 529 (533)
++.+
T Consensus 405 ~~~~ 408 (431)
T PRK06209 405 VYRK 408 (431)
T ss_pred HHHH
Confidence 8743
No 297
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.1e-17 Score=173.06 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=121.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH----HHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~ 244 (533)
..+|.+.+|++.+ .+..+++++|++|+..++++++ .+||+|+++.++|.+.. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all-~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLL-QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHh-CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 5678888888864 3457888999999999999988 89999999999998643 345678999888864
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
. |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... . .+
T Consensus 136 ~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~-~-~p-- 195 (427)
T PRK05994 136 D-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL-I-RP-- 195 (427)
T ss_pred C-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc-C-Cc--
Confidence 2 78999999876 7999999999999999998 88999999999999999999974211 1 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+ ++ ..| +++.|++|.++| +|-.+|.+++
T Consensus 196 -l-----~~---gaD---ivv~S~tK~lgg-~~~~~gG~v~ 223 (427)
T PRK05994 196 -I-----EH---GAD---IVVHSLTKFLGG-HGNSMGGIIV 223 (427)
T ss_pred -c-----cc---CCc---EEEEcCccccCC-CCCcEEEEEE
Confidence 1 11 244 889999999843 5555665554
No 298
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.4e-18 Score=167.91 Aligned_cols=370 Identities=14% Similarity=0.090 Sum_probs=226.3
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhc
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~ 154 (533)
.........+.+++++.+ +||+..|.... ++... .+++.+++.+++.+
T Consensus 40 v~~~~gkg~kl~D~~g~E------yiD~~ssw~~~--------------------~~Gha------npev~ral~~q~~k 87 (433)
T KOG1401|consen 40 VVIESGKGSKLFDPDGKE------YIDFTSSWAVT--------------------ILGHA------NPEVARALAEQAKK 87 (433)
T ss_pred eeeecceeeeeecCCcce------eeeeccceecc--------------------ccCCC------CHHHHHHHHHHHhh
Confidence 345555566666667766 78877665332 01111 58899999998887
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-----CCC--eEEEcCCcCcc
Q 009517 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----END--GILCPIPQYPL 227 (533)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----~gd--~Vlv~~p~~~~ 227 (533)
... ....|.... ..++.+.+.+.+.+ -.+++|++.+++++|++.+++..++. +-+ +++....+|++
T Consensus 88 ~~h-s~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG 160 (433)
T KOG1401|consen 88 LGH-SSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHG 160 (433)
T ss_pred hee-ccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCC
Confidence 533 122232222 33444444444332 26889999999999999999988621 112 49999999998
Q ss_pred hHHHHHH-hCCeEEEEecCCC-CCC----CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHH
Q 009517 228 YSASIAL-HGGTLVPYYLDEA-TGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCK 300 (533)
Q Consensus 228 ~~~~~~~-~g~~~~~v~~~~~-~~~----~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~ 300 (533)
....+.. .+......|.++- +++ .-|...+++.++.+. ..+.+||++..+.-.|. .++++.+..|..+|+
T Consensus 161 ~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~---~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~ 237 (433)
T KOG1401|consen 161 RTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK---GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECD 237 (433)
T ss_pred cchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC---CceEEEEEecccCCCCcccCCHHHHHHHHHHHh
Confidence 6654433 2333333332210 011 117899999998851 14788988887877786 667888999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
++|+++|+||++.+|.+.|. ..+.++.+..|| |.++.|.+. .|+++|+.++ ++++++.+....
T Consensus 238 ~~~vl~I~DEV~tG~gR~g~-------~~a~e~~~~~PD-----I~t~aK~L~--gGlPigA~~v---~~kV~~~i~~~~ 300 (433)
T KOG1401|consen 238 DNGVLLIFDEVQTGLGRLGY-------GWAQEYFGVTPD-----ITTVAKPLG--GGLPIGATGV---RDKVAEMISPGD 300 (433)
T ss_pred hcCceEEeehhhhCccccch-------HHHHHHhCcCCc-----ceeehhhcc--CCceeEEEee---hHHHHhhcCCCC
Confidence 99999999999999877664 223333334788 788999995 4899999998 999999886532
Q ss_pred ----hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ceEecCCceeEEecccC
Q 009517 381 ----SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG-ITCNKAEGAMYLFPRIQ 455 (533)
Q Consensus 381 ----~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~gg~~~~~~~~ 455 (533)
..+++.+++++.++...|+... --+.++++...=+..++.+.+.+.+.+. +.-....| +++...+.
T Consensus 301 ~l~hg~Tf~gnpLacsa~~~~l~~l~--------~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grg-l~ig~~~~ 371 (433)
T KOG1401|consen 301 HLYHGGTFSGNPLACSAGIKVLDELK--------DPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRG-LVIGFEFE 371 (433)
T ss_pred ccccCcccCCChhhhhHHHHHHHHHc--------CHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeE-EEEEEEEe
Confidence 3789999999999998885322 1122344444444445555555555422 22222333 33332233
Q ss_pred CCHH-HHHHHHhcCCCChHHHHHHH---HHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 456 LPEK-AIKAAEAEKTVPDAFYCRRL---LNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 456 ~~~~-~~~~~~~~~~~~~~~~~~~l---l~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.|.. ..+.... .-++...+ +.+.||.++| . ++ ++...++|.++.+++++.+.++++.
T Consensus 372 ~p~~~~~d~~~~-----~~ll~~~~~~~~~~~gv~i~P-------~---~~-l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 372 GPVYKFADAARE-----QGLLILTLGKGLLEEGVRIAP-------I---YL-LTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred echhhhhhhhhh-----hhHHHHHHhcccccceEEEec-------c---cc-ccccCcHHHHHHHHHHHHHHHHHhc
Confidence 3332 1111100 11111111 1224555554 0 11 2223557788888888888877653
No 299
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.82 E-value=5.8e-17 Score=168.04 Aligned_cols=194 Identities=14% Similarity=0.152 Sum_probs=142.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc--------c
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI--------R 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--------~ 212 (533)
+.+.++++.+.+.. ....+++. ..+|++++|++++ .+++++++|+++++..++.++. .
T Consensus 43 ~~~~~~a~~~~~~~----~~~~~G~~--~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~ 108 (438)
T PRK15407 43 DAKELQNLVDASLD----FWLTTGRF--NDAFEKKLAEFLG--------VRYALLVNSGSSANLLAFSALTSPKLGDRAL 108 (438)
T ss_pred CHHHHHHHHHHHHh----CcccCChh--HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHhhccccccCC
Confidence 56666666666654 13333332 5789999999975 3479999999999999998762 2
Q ss_pred CCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 213 SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
.+||+|+++.|+|..+...+...|++++.++++.. +|.+|++.+++++++ ++++|+++++ +|... ++
T Consensus 109 ~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~-~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~---dl 175 (438)
T PRK15407 109 KPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELP-TYNIDASLLEAAVSP------KTKAIMIAHT---LGNPF---DL 175 (438)
T ss_pred CCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHcCc------CCeEEEEeCC---CCChh---hH
Confidence 68999999999999999999999999999998753 789999999999976 7999999875 34433 48
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~ 370 (533)
++|.++|+++|++||+|++|+....-.+.+..+ ..| +.+.||. |.+. +|- .|++++ .++
T Consensus 176 ~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~-----------~gd---~~~fSf~~~k~~~--~ge-GG~l~t--~d~ 236 (438)
T PRK15407 176 AAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGT-----------FGD---IATLSFYPAHHIT--MGE-GGAVFT--NDP 236 (438)
T ss_pred HHHHHHHHHCCCEEEEECccchhhhcCCeeeec-----------cCc---eEEEeCCCCCCcc--ccC-ceEEEE--CCH
Confidence 999999999999999999997533212111111 123 4455665 6663 354 588887 467
Q ss_pred HHHHHHHHhh
Q 009517 371 EVREQIYKVA 380 (533)
Q Consensus 371 ~~~~~l~~~~ 380 (533)
++.+.+..+.
T Consensus 237 ~l~~~~~~~~ 246 (438)
T PRK15407 237 LLKKIIESFR 246 (438)
T ss_pred HHHHHHHHHH
Confidence 7776665543
No 300
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.81 E-value=6.3e-18 Score=174.90 Aligned_cols=356 Identities=12% Similarity=0.041 Sum_probs=213.2
Q ss_pred chHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHH-Hh
Q 009517 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQI-LD 153 (533)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~-~~ 153 (533)
..+.++++...++.||++ ++|+..|.... ..+++ ++.+++++.++ +.
T Consensus 42 ~~~~~a~G~~l~D~dG~~------ylD~~sg~~~~----------------------~lGh~----~p~i~~Ai~~q~~~ 89 (464)
T TIGR00699 42 ADYEKSRGNYLVDVDGNR------LLDLYSQISSI----------------------PIGYN----NPALLKAAQSPEMA 89 (464)
T ss_pred eEEEecccCEEEeCCCCE------EEEccCCHhhh----------------------cCCCC----CHHHHHHHHHHHHH
Confidence 367788888888888887 77776665332 22222 68999999874 33
Q ss_pred c-CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------------------
Q 009517 154 Q-IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------------------- 213 (533)
Q Consensus 154 ~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------------------- 213 (533)
. ... ...|... ...+|-+.+++.+..... ...++|+++++|+||++.+++.++..
T Consensus 90 ~~l~~--~~~~~~~-~~~~la~~l~~~l~~~~p--~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~ 164 (464)
T TIGR00699 90 TTLIN--RPALGNF-PSKDWAKILKEGILKVAP--KGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENES 164 (464)
T ss_pred Hhhcc--cccCCcH-HHHHHHHHHHHhHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Confidence 2 111 1112211 123444444443332221 23468999999999999999988410
Q ss_pred ------CC---CeEEEcCCcCcchHHHHHHh-CCe-----------EEEEecCCC-CCCC-----------CCHHHHHHH
Q 009517 214 ------EN---DGILCPIPQYPLYSASIALH-GGT-----------LVPYYLDEA-TGWG-----------LETSEVKKQ 260 (533)
Q Consensus 214 ------~g---d~Vlv~~p~~~~~~~~~~~~-g~~-----------~~~v~~~~~-~~~~-----------ld~~~l~~~ 260 (533)
+| .+|+....+|++....+... |.. +..+|.... ..+. -+++.+++.
T Consensus 165 ~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~ 244 (464)
T TIGR00699 165 CMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDL 244 (464)
T ss_pred cccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHH
Confidence 11 27999999999976554433 211 011111100 0000 135566777
Q ss_pred HHHHHhcCCCeeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC--
Q 009517 261 LEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE-- 337 (533)
Q Consensus 261 i~~~~~~g~~~~~iil~~p~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~-- 337 (533)
+... +.++.+||++..+...|.+. +++.+++|.++|++||+++|+||++++|..+|. +.. .+..++.
T Consensus 245 l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~--~fa-----~e~~gv~~~ 314 (464)
T TIGR00699 245 IKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGK--FWA-----HEHWNLDDP 314 (464)
T ss_pred HHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcc--hhH-----HHhcCCCCC
Confidence 7542 23688898887777778765 788899999999999999999999999866553 212 2222223
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH-hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK-VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~-~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
|| +.+|+|.+ |-.|+ ++. .+ .+..... ....|+++++++++++.+.|+. .+ .+
T Consensus 315 PD-----i~t~gK~l-g~gG~----~~~---~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~-----------l~-~~ 368 (464)
T TIGR00699 315 PD-----MVTFSKKF-QTAGY----FFH---DP-AFRPNKPYRQFNTWMGDPSRALILREIIQE-----------IK-RK 368 (464)
T ss_pred CC-----EEEehhhh-ccCCc----ccc---ch-hccCCCCcccccCCCCCHHHHHHHHHHHHH-----------HH-hc
Confidence 77 57789988 31243 332 22 2211111 1236788999999999887741 11 13
Q ss_pred HHHHHHHHHHHHHHHHHhcC----C-CceEec--CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc
Q 009517 417 GILSSLARRAKTLEDAFNSL----E-GITCNK--AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP 489 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~----~-g~~~~~--~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p 489 (533)
.+.+..+++.+++.+.|+++ | .+..++ +.|.|+.+ .++... ....++ +.+.++||++.+
T Consensus 369 ~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gi---e~~~~~----------~~~~i~-~~~~~~Gvl~~~ 434 (464)
T TIGR00699 369 DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAW---DTPDEA----------KRDKLL-KKARNNGVNIGG 434 (464)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEE---ecCCHH----------HHHHHH-HHHHHCCcEEec
Confidence 45555566666666666554 3 244455 56555443 322110 012333 445568999975
Q ss_pred CCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 490 GSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 490 g~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
. +.+.+||++. +++++|++++++|.+++
T Consensus 435 ~-------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 435 C-------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred C-------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2 2348999995 89999999999998763
No 301
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.80 E-value=8e-18 Score=165.80 Aligned_cols=190 Identities=20% Similarity=0.297 Sum_probs=152.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccc-cC--CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC-
Q 009517 141 SADSIERAWQILDQIPGRATGA-YS--HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND- 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~-Y~--~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd- 216 (533)
|+.|++++.+.+....++.... |. ...+..+-|+.+|++++ .++++|++|+|+||++.++++.+.+..+|
T Consensus 56 ~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiFts~ATEs~Nlvl~~v~~~~~~~ 129 (428)
T KOG1549|consen 56 DPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVFTSGATESNNLVLKGVARFFGDK 129 (428)
T ss_pred CHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEEeCCchHHHHHHHHHhhcccccc
Confidence 7999999988776543322222 33 34557889999999997 67778999999999999999998654566
Q ss_pred ---eEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 217 ---GILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 217 ---~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
.|++.+-.|++....+ +..|..++.+|+.. +...|.+.+++.|++ +|++|.+.+.+|.+|++.|
T Consensus 130 ~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~--~~~~d~~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P-- 199 (428)
T KOG1549|consen 130 TKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED--SGLVDISKLREAIRS------KTRLVSIMHVNNEIGVLQP-- 199 (428)
T ss_pred ccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc--cccccHHHHHHhcCC------CceEEEEEecccCcccccc--
Confidence 8998888888765544 55689999999984 447899999999998 8999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+++|.++|+++++.+++|.+++- |.. ..++ +++ ..| ++..|.+|.+ |.+| +|++.+
T Consensus 200 -v~EI~~icr~~~v~v~~DaAQav----G~i-~vDV----~el---n~D---~~s~s~HK~y-gp~~--iGaLYv 255 (428)
T KOG1549|consen 200 -VKEIVKICREEGVQVHVDAAQAV----GKI-PVDV----QEL---NAD---FLSISAHKIY-GPPG--IGALYV 255 (428)
T ss_pred -HHHHHHHhCcCCcEEEeehhhhc----CCc-cccH----HHc---Cch---heeeeccccc-CCCc--ceEEEE
Confidence 99999999999999999999985 432 2343 333 345 6677889998 8888 898887
No 302
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.79 E-value=1.4e-16 Score=161.20 Aligned_cols=215 Identities=15% Similarity=0.189 Sum_probs=156.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH----HhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~----~~g~~~~~v~~ 244 (533)
...|.++++++.+ .+.++++++|+.|+..++..++ ++||.|+++...|.+-...++ ..|.++..++.
T Consensus 57 ~~~le~~la~Le~--------g~~a~~~~SGmaAi~~~l~~ll-~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 57 VRALEQRLAALEG--------GEDALLFSSGMAAISAALLALL-KPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHHT---------SEEEEESSHHHHHHHHHHHHS--TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred HHHHHHHHHHhhc--------ccceeeccchHHHHHHHHHhhc-ccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 4567777776653 4679999999999999999998 799999999999998665544 46889888753
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEccccccccccCCCCc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG-LVLLADEVYQENVYVPEKKF 323 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~-~~lI~De~y~~~~~~~~~~~ 323 (533)
-|++++++++++ ++++|+++.|.||+..+.+ +++|+++|+++| +++|+|..+....+- .|
T Consensus 128 -------~d~~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~--~p- 188 (386)
T PF01053_consen 128 -------TDLEALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ--NP- 188 (386)
T ss_dssp -------TSHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC---G-
T ss_pred -------hhHHHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee--cc-
Confidence 379999999988 8999999999999988887 999999999998 999999999653221 11
Q ss_pred ccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhh-ccccCChHHHHHHHHHcCCC
Q 009517 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS-VNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~ 401 (533)
+ .+ ..| |++.|.+|.++|....=.|.+++ .+ .++.+.++.... .....++..+..+..-|+
T Consensus 189 --L-~~-------GaD---ivv~S~TKyl~Ghsdv~~G~vv~--~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~-- 251 (386)
T PF01053_consen 189 --L-EL-------GAD---IVVHSATKYLSGHSDVMGGAVVV--NGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR-- 251 (386)
T ss_dssp --G-GG-------T-S---EEEEETTTTTTTSSSE-EEEEEE--SSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT--
T ss_pred --C-cC-------Cce---EEEeeccccccCCcceeeEEEEE--CchhhhhhhhcchhhhcCccchHHHHHHHhcCCC--
Confidence 1 11 234 88999999986544455788876 23 578887776554 445566666666666553
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+..+.++..++...+.+.|++.|.+.
T Consensus 252 ------------Tl~~R~~~~~~nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 252 ------------TLPLRMERQNENAEALAEFLEEHPKVK 278 (386)
T ss_dssp ------------THHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 244555667778888999999887654
No 303
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.4e-16 Score=164.53 Aligned_cols=155 Identities=19% Similarity=0.215 Sum_probs=123.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~ 244 (533)
..+|++.+|++.+ .+..++++++++|+.+++..++ .+||+|+++...|......+ ...|++++.++.
T Consensus 66 ~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll-~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALEG--------GVGAIATASGQAALHLAIATLM-GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 6788889998875 2347889999999999999887 79999999999998654443 447999988875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+ |+++++++|++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|.++..-.. . .+
T Consensus 137 ~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~-~-~p-- 196 (433)
T PRK08134 137 G-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL-L-RP-- 196 (433)
T ss_pred C-------CHHHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc-C-Cc--
Confidence 3 79999999987 8999999999999999999 99999999999999999999864222 1 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+ ++ ..| +++.|.+|.+ |-+|-.+|.+++
T Consensus 197 -l-----~~---GaD---~vv~S~tK~l-~g~g~~~gG~v~ 224 (433)
T PRK08134 197 -F-----EH---GAD---LVYHSATKFL-GGHGTAIGGVLV 224 (433)
T ss_pred -h-----hc---CCC---EEEecccccc-CCCCCceEEEEE
Confidence 1 11 234 7899999988 546766666654
No 304
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=7.4e-17 Score=155.14 Aligned_cols=320 Identities=13% Similarity=0.140 Sum_probs=203.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
.+++.+++.+.-.. ....|+...-...+.+.+++.+ | .+.++++++||++..+++.+.+ +||+.|++
T Consensus 13 ~~~m~eam~~a~~~----~~~~YG~D~~~~~~e~~~ae~~----g----~~a~~Fv~sGT~aN~lal~~~~-~~~~~vi~ 79 (342)
T COG2008 13 TPEMREALAAANAV----GDDVYGEDPTTNALEQRIAELF----G----KEAALFVPSGTQANQLALAAHC-QPGESVIC 79 (342)
T ss_pred CHHHHHHHHhcccc----CCCCCCCCHHHHHHHHHHHHHh----C----CceEEEecCccHHHHHHHHHhc-CCCCeEEE
Confidence 57777777654421 2456766554555555555554 3 3789999999999999999999 89999998
Q ss_pred cCCcCcchHH--HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 009517 221 PIPQYPLYSA--SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (533)
Q Consensus 221 ~~p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l 298 (533)
..-.|..... ....++ .+.+++..+..+..+++++++..|+...-....+..+++.+.+|..|+++|.+++++|.++
T Consensus 80 ~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~ 158 (342)
T COG2008 80 HETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV 158 (342)
T ss_pred eccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHH
Confidence 8876654322 223332 2334455554566899999999988621023356777777777789999999999999999
Q ss_pred HHHcCCEEEEcccc--ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 299 CKKEGLVLLADEVY--QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 299 ~~~~~~~lI~De~y--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
|+++|+.|..|.+- ..+...+ ++...+.. .+. ++..++||+. |+.+|.|++ .+.++++.+
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg----~~~~~~~~-------~~D-~v~~~~tK~g----~~~~gAiv~--gn~~~~~~a 220 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALG----VALKTIKS-------YVD-SVSFCLTKGG----GAPVGAIVF--GNRDFAKRA 220 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcC----CCHHHHHh-------hCC-EEEEecccCC----cceeeeEEE--cCHHHHHHH
Confidence 99999999999873 2222222 23323322 222 4455789975 688899888 599999888
Q ss_pred HHhhhcc---ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 377 YKVASVN---LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 377 ~~~~~~~---~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
...+... +.-..+..+....+|++.. | .....+-.++...|.+.|++.||+++..|.-...+|++
T Consensus 221 ~~~rK~~Ggl~~k~r~laA~~~~~l~~~~--------~----~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~ 288 (342)
T COG2008 221 RRWRKRAGGLMRKARFLAAQGLYALEDDV--------W----RLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVR 288 (342)
T ss_pred HHHHHHhcccHhhhhHHHHHHHHHHhccH--------H----HHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEE
Confidence 7665422 2223333334444454321 1 11222334457788999987789998876444456654
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
++ ....+ .......+.+.|+.+.++. ..+|+..+ .+++++++++..++.++
T Consensus 289 l~--~~~i~----------~l~~~~~~~~~~~~~~~~~--------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 289 LP--ESAIE----------ALRLAGALFYRGVLIGAHG--------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred CC--hHHHH----------HHHhhchhheeeeeccCCC--------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 44 21111 1111122334555555422 26788875 88899999998888764
No 305
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.79 E-value=3.6e-16 Score=155.28 Aligned_cols=316 Identities=16% Similarity=0.201 Sum_probs=206.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
-.+.++++.+.+.+ .+...++. ..+|.+++++|++ ....+.++++|.|+.++++++--.|||+|++
T Consensus 14 ~~~e~~~v~~vl~s----g~i~~G~~--v~~FE~~~ae~~G--------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ 79 (374)
T COG0399 14 GEEELAAVQEVLKS----GWLTGGPF--VRRFEQAFAEYLG--------VKYAVAVSSGTAALHLALLALAIGPGDEVIV 79 (374)
T ss_pred chHHHHHHHHHHHc----CCeecChH--HHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHhcCCCCCCEEEe
Confidence 46778888888876 23334333 6789999999975 6678999999999999999663379999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++-+|....+.+...|+++++++++++ +|.+|++.+|++|++ ++|+|+..|-- |...+ +++|.++|+
T Consensus 80 ps~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~------~tKAIipVhl~---G~~~d---m~~i~~la~ 146 (374)
T COG0399 80 PSFTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITP------RTKAIIPVHLA---GQPCD---MDAIMALAK 146 (374)
T ss_pred cCCchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHccc------CCeEEEEehhc---cCCCC---HHHHHHHHH
Confidence 999999999999999999999999975 889999999999998 79999988652 33344 899999999
Q ss_pred HcCCEEEEcccccccc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecC--CccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 301 KEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+||++||+|.+++... |.|. ...+ ..+ +.+.|| .|.+ + +| -.|.++. .++++.+.++
T Consensus 147 ~~~l~vIEDaAqa~Ga~y~gk-~vGt-----------~Gd---~~~fSF~~~K~i-t-tg-EGGav~t--nd~ela~k~~ 206 (374)
T COG0399 147 RHGLPVIEDAAQAHGATYKGK-KVGS-----------FGD---IGAFSFHATKNL-T-TG-EGGAVVT--NDEELAEKAR 206 (374)
T ss_pred HcCCeEEEEcchhccCeecCc-cccc-----------ccc---eEEEEecCCCCc-c-cc-CceEEEe--CCHHHHHHHH
Confidence 9999999999987532 3222 2111 122 445555 3888 4 56 7788877 4788888887
Q ss_pred Hhhhcc---------------ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe
Q 009517 378 KVASVN---------------LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN 442 (533)
Q Consensus 378 ~~~~~~---------------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 442 (533)
.+.... ++.......|+.... .++.++++.++-++..+...+.|++++++...
T Consensus 207 ~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~------------QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p 274 (374)
T COG0399 207 SLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLA------------QLERLDEINERRREIAQIYAEALKGLPGITLP 274 (374)
T ss_pred HHHHhCcCCCccccceeeecccccCHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 765311 122222222222211 12333444444444555677777777654433
Q ss_pred c-CCce---eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHcc----ceEEEcCCCC------C-CC----C-----C
Q 009517 443 K-AEGA---MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNAT----GIVLVPGSGF------G-QV----P-----G 498 (533)
Q Consensus 443 ~-~~gg---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~----gV~v~pg~~f------~-~~----~-----g 498 (533)
. +.+. ++++. +.++.. +. ....+...|++. +++..|-... + .. + .
T Consensus 275 ~~~~~~~~~~~~~~-i~~~~~--------~~--~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~ 343 (374)
T COG0399 275 PEPDGAVHAWHLYT-ILVDEE--------GI--SRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLS 343 (374)
T ss_pred CCCCCceeeeeeeE-EEecCC--------CC--CHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHh
Confidence 2 2222 22221 111110 11 222244677888 4555663222 0 00 0 1
Q ss_pred CceEEEEe--cCCcCcHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTI--LPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 499 ~~~iRis~--~~~~e~i~~~~~~l~~~l~~ 526 (533)
...+++-+ .++++++++.++.|++++..
T Consensus 344 ~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 344 ERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred hCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 23566655 38889999999999887753
No 306
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=5.1e-16 Score=159.07 Aligned_cols=334 Identities=14% Similarity=0.055 Sum_probs=211.8
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC---
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE--- 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~--- 214 (533)
.+.+.+++...+.+.+.. ....|.......++.....+...+.|| .+.-+|-.-+|+ .|...++.+++ +|
T Consensus 62 s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~Sg~-~An~~v~~all-~~~~~ 137 (493)
T PRK13580 62 SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPHSGA-DANLVAFWAIL-AHKVE 137 (493)
T ss_pred CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCCCcH-HHHHHHHHHHh-ccccc
Confidence 466666665555443221 123355556567777777777777777 444567666655 66777777777 55
Q ss_pred ----------------------------CCeEEEcCCcCcchHH---HHHHhC--CeEEEEecCCCCCCCCCHHHHHHHH
Q 009517 215 ----------------------------NDGILCPIPQYPLYSA---SIALHG--GTLVPYYLDEATGWGLETSEVKKQL 261 (533)
Q Consensus 215 ----------------------------gd~Vlv~~p~~~~~~~---~~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i 261 (533)
||+|+..++...++.. .....| ...+.++++.+ +..+|++++++.+
T Consensus 138 ~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~~ 216 (493)
T PRK13580 138 SPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAALA 216 (493)
T ss_pred CcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc-cCccCHHHHHHHH
Confidence 7999988776655422 112222 56667777744 4579999999999
Q ss_pred HHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCce
Q 009517 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (533)
++ .++.|++++.+|-++ ..+ +++|+++|+++|+++++|+++.-..+.++. .. .+... .++ .
T Consensus 217 ~~------~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~-~~------~~~~~-~~~-~ 277 (493)
T PRK13580 217 RE------FKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKV-FT------GDEDP-VPH-A 277 (493)
T ss_pred hh------cCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceecccc-ch------hhcCC-CCC-C
Confidence 88 677888888877644 666 999999999999999999999775554321 00 00000 011 1
Q ss_pred EEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHH-HHHHHHH
Q 009517 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYC-AERDGIL 419 (533)
Q Consensus 342 vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~ 419 (533)
.|+++|++|+|. |-+.|++++ ++++++.+..... ..+++.+...+++..++. +.. .+.+..+
T Consensus 278 D~vtgT~hKaL~---GP~GG~I~~---~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~----------e~~~~ef~~y~ 341 (493)
T PRK13580 278 DIVTTTTHKTLR---GPRGGLVLA---KKEYADAVDKGCPLVLGGPLPHVMAAKAVALA----------EARTPEFQKYA 341 (493)
T ss_pred cEEEeCChhhcc---CCCeEEEEe---cHHHHHHHhhCCCcccCCCccHHHHHHHHHHH----------HHhCccHHHHH
Confidence 277899999883 666799888 8888888854433 223333333333333331 111 1123456
Q ss_pred HHHHHHHHHHHHHHhcCCCceEecC-CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 420 SSLARRAKTLEDAFNSLEGITCNKA-EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 420 ~~~~~~~~~l~~~L~~~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
+++.++.+.|++.|.+. |+.++.. ...-.+++.+.... .....+.+.|.+.||.+.+-.....+.+
T Consensus 342 ~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~------------~~g~~a~~~L~e~GI~vn~i~~Ptvp~g 408 (493)
T PRK13580 342 QQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG------------LTGRQAESALLDAGIVTNRNSIPSDPNG 408 (493)
T ss_pred HHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH------------HHHHHHHHHHHHCCeEEccccCCCCCCC
Confidence 77888899999999988 8887532 22234444443111 0122345678889999986443333333
Q ss_pred ---CceEEEEec------CCcCcHHHHHHHHHHHHHHH
Q 009517 499 ---TWHFRCTIL------PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 499 ---~~~iRis~~------~~~e~i~~~~~~l~~~l~~~ 527 (533)
...|||+.. .++++|+++++.|.++++..
T Consensus 409 ~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 409 AWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 447999984 24789999999999888754
No 307
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.78 E-value=3.5e-17 Score=169.95 Aligned_cols=358 Identities=11% Similarity=0.019 Sum_probs=202.2
Q ss_pred cccchHHHHHHHHHHhh-cCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHH--HHH
Q 009517 72 VRGEIVSIAQRLQQELQ-TNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSI--ERA 148 (533)
Q Consensus 72 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~--~~~ 148 (533)
|+.....++++...++. ||++ +||+..|.... ..+++ ++.++ +++
T Consensus 18 p~~~~~~~a~G~~l~D~~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~~~ai 65 (431)
T TIGR03251 18 DLVLDLDRSRGSVLVDARDGRR------YLDMFSFFASM----------------------ALGMN----HPALVDDLAF 65 (431)
T ss_pred ceeeEEEeccCCEEEECCCCCC------hhhcccChhhc----------------------CCCCC----ChhhhHHHHH
Confidence 44323467777777774 7888 56654443221 11111 57788 788
Q ss_pred HHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------C------C
Q 009517 149 WQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-------E------N 215 (533)
Q Consensus 149 ~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-------~------g 215 (533)
.+++.+.... ...+ ... ..+....+++.+.+..+ +...+.++++++|++|++.+++..+.. . +
T Consensus 66 ~~q~~~~~~~-~~~~-~~~-~~~~~~~l~~~l~~~~~-~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~ 141 (431)
T TIGR03251 66 RARLGAAAVN-KPSN-SDV-YTVAMARFVDTFARVLG-DPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALG 141 (431)
T ss_pred HHHHHHhhhc-cccc-CCC-CCHHHHHHHHHHHHhcC-CCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCC
Confidence 8887753100 0011 011 11222233333332211 123468999999999999999988511 1 3
Q ss_pred CeEEEcCCcCcchHHHHHHh-CCe-EE--EEecC------CC-C--CC-----C-------CCHHHHHHHHHHHHhcCCC
Q 009517 216 DGILCPIPQYPLYSASIALH-GGT-LV--PYYLD------EA-T--GW-----G-------LETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~-g~~-~~--~v~~~------~~-~--~~-----~-------ld~~~l~~~i~~~~~~g~~ 270 (533)
.+|+....+|++....+... |.. .. ..|.. .. . .+ . -+++.+++.+.. .+.+
T Consensus 142 ~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~ 218 (431)
T TIGR03251 142 TQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHD 218 (431)
T ss_pred ceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCc
Confidence 67999999999976544433 211 00 01110 00 0 00 0 023444455543 1347
Q ss_pred eeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCC
Q 009517 271 VRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (533)
Q Consensus 271 ~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 349 (533)
+.+||++..+.-.|. .++++.+++|.++|++||+++|+||++++|..+|. . +..+..++.|| +.+++
T Consensus 219 iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~--~-----~a~~~~gv~PD-----i~~~g 286 (431)
T TIGR03251 219 IACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGT--A-----WAYQQLGVQPD-----IVAFG 286 (431)
T ss_pred EEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccch--H-----HHHHhcCCCCC-----EEEec
Confidence 888988877776776 46788899999999999999999999999766553 1 11222223677 44689
Q ss_pred ccCCCCCCCeeEEEEEecCCHHHHHHHH---H---hhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHH
Q 009517 350 KGYYGECGKRGGYMEVTGFSAEVREQIY---K---VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (533)
Q Consensus 350 K~~~gl~G~riG~v~~~~~~~~~~~~l~---~---~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (533)
|.+ . . .|++. ..++.+... . ....|++.++++++++.+.|+. .++ +.+.++.+
T Consensus 287 K~~-~--~--~g~~~----~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~-----------l~~-~~l~~~~~ 345 (431)
T TIGR03251 287 KKT-Q--V--CGIMA----GRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEI-----------IEE-ERLVDNAR 345 (431)
T ss_pred ccC-c--c--ceEEe----cchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHH-----------HHh-cCHHHHHH
Confidence 975 1 1 34443 333322111 1 1236678899999999888741 111 12334445
Q ss_pred HHHHHHHHHHhc----CC-CceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 424 RRAKTLEDAFNS----LE-GITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 424 ~~~~~l~~~L~~----~~-g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
++.+++.+.|++ .+ .+..+++.|.|.. +.+. ... ....++ ..|.++||++.|..
T Consensus 346 ~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~-i~~~--~~~----------~~~~~~-~~l~~~Gvl~~~~g------- 404 (431)
T TIGR03251 346 VQGAHLLARLHELAAEFPHLVSNPRGRGLMCA-FDLP--STA----------DRDEVI-RQLYREGVLLLGCG------- 404 (431)
T ss_pred HHHHHHHHHHHHHHHhCccceecccccceeEE-EEeC--CHH----------HHHHHH-HHHHhCCeEEecCC-------
Confidence 555555555544 34 2334556655433 2332 110 112334 44557899998632
Q ss_pred CceEEEEec--CCcCcHHHHHHHHHH
Q 009517 499 TWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 499 ~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
.+.+||++. +++++|++++++|.+
T Consensus 405 ~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 405 ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 236898885 889999999999876
No 308
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=4.2e-16 Score=158.13 Aligned_cols=213 Identities=15% Similarity=0.123 Sum_probs=159.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~ 244 (533)
...|.+.+|++-+ .+..+++++|+.|+..++..++ ++||+|+++...|.+....+ +..|+++..++.
T Consensus 64 ~~~le~~la~LEg--------~~~a~~~~SGmaAi~~~~~~ll-~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 64 HFSLQEAMCELEG--------GAGCALYPCGAAAVANAILAFV-EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred HHHHHHHHHHHhC--------CCeEEEEhHHHHHHHHHHHHHc-CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 4567777777632 4678888999999999999888 89999999998887765444 557999888763
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC--CEEEEccccccccccCCCC
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG--LVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~--~~lI~De~y~~~~~~~~~~ 322 (533)
.|.+.++++|++ ++++|++++|.||||.+.+ +++|+++|++++ +++++|.++.--..
T Consensus 135 -------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~----- 193 (395)
T PRK08114 135 -------LIGADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL----- 193 (395)
T ss_pred -------CCHHHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-----
Confidence 368899999976 7999999999999999998 999999999984 99999999964221
Q ss_pred cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCC
Q 009517 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~ 401 (533)
... .++ ..| |++.|.+|.++|....-.|.++. +++..+.+..... ...+.++..++.+..-|+
T Consensus 194 -~~p----l~~---GaD---ivv~S~tKyl~Ghsdv~~G~v~~---~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~-- 257 (395)
T PRK08114 194 -FKA----LDF---GID---ISIQAGTKYLVGHSDAMIGTAVA---NARCWEQLRENSYLMGQMVDADTAYMTSRGLR-- 257 (395)
T ss_pred -cCH----HHc---CCc---EEEEcCcccccCCCcceeEEEEc---CHHHHHHHHHHHHhccCCCCHHHHHHHHcCCC--
Confidence 111 111 234 88999999997654578887765 6776666654433 445667777776665553
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.+..+.++..++...+.+.|++.|.+
T Consensus 258 ------------TL~lR~~~~~~na~~va~~L~~hp~V 283 (395)
T PRK08114 258 ------------TLGVRLRQHEESSLKVAEWLAEHPEV 283 (395)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 23445566677788899999887554
No 309
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.78 E-value=1.8e-16 Score=162.43 Aligned_cols=311 Identities=12% Similarity=0.098 Sum_probs=198.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHhcc-C-CCCeEEEcCCcCcchHHHHHHhCCeEEEEec-
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIR-S-ENDGILCPIPQYPLYSASIALHGGTLVPYYL- 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~~~~l~~-~-~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~- 244 (533)
...+.+.+.+.+.+..|.. +.+..++++|++ .++.+++.++.. . +||+|+++.-+|.....++..+|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 5566666767666666633 123588888888 688888777641 1 5899999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
.++++|.+|+++|+++|++. +++..++++.+|+ |+.....+++++|+++|++||+++|+|++|.....
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~------- 249 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN------- 249 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh-------
Confidence 24458999999999999862 1134566666665 55555567799999999999999999999985211
Q ss_pred cHHHHH-hhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVS-RSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~-~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~ 403 (533)
.+..+. ..+ ..+.-.+++.|++|++ .+||+ |+++.. .++++++.+...... ...+...+.+...++..+
T Consensus 250 ~~~~~~~~g~---~~Grad~vv~s~hK~l-~~pg~--Gg~I~~-~d~el~~~i~~~y~g-~~~~s~~~~~~~~ll~~G-- 319 (444)
T TIGR03531 250 KYMELINKAI---KVGRVDAVVSSTDKNF-MVPVG--GAIIYS-FDENFIQEISKSYPG-RASASPSLDVLITLLSLG-- 319 (444)
T ss_pred hhhhhhhccc---cccCCCeEEEeCccCC-CCCCC--EEEEEE-CCHHHHHHHHHhccC-CCCChHHHHHHHHHHHhC--
Confidence 111111 111 0100136688999998 67787 555432 478888888765432 223455666666666432
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEecC-C--ceeEEecccCCCHHHHHHHHhcCCCChHHHHH
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNKA-E--GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCR 477 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~-~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (533)
.+.++++.+++.++++++.+.|+++ -|..+... . ..+-+. ++... ..+...+-
T Consensus 320 --------~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~--~~~~~-----------~~~~~~~g 378 (444)
T TIGR03531 320 --------SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMT--LSTLK-----------GKDPTMLG 378 (444)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEe--ccccc-----------ccCHHHHH
Confidence 2456777788888888888888775 35555433 2 222222 22100 01112223
Q ss_pred HHHHccceE----EEcCC-------CC---CCC-CC--CceEEEEe--cCCcCcHHHHHHHHHHH
Q 009517 478 RLLNATGIV----LVPGS-------GF---GQV-PG--TWHFRCTI--LPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 478 ~ll~~~gV~----v~pg~-------~f---~~~-~g--~~~iRis~--~~~~e~i~~~~~~l~~~ 523 (533)
.+|-.++|. |.||. .| +.. +. ..|+-++. +.+.+||+.++++|+++
T Consensus 379 ~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 379 SMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred HHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 444445552 45665 22 211 10 11554554 38899999999999875
No 310
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=6.1e-16 Score=160.03 Aligned_cols=324 Identities=13% Similarity=0.068 Sum_probs=192.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC----CcccHHHHH----HHHHHHHhhcCCCCCCCCEE-EcCChHHHHHHHHHHhc
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH----SQGIKGLRD----TIAAGIEARDGFPADPNDIF-LTDGASPAVHMMMQLLI 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~----~~G~~~lr~----aia~~~~~~~g~~~~~~~i~-~t~G~~~al~~~~~~l~ 211 (533)
++.+++++...+.+..+. ...|.. ..-..+|.+ .+++++ | .+..+ .+++|+.|+..++.+++
T Consensus 41 ~p~v~~a~~~~~~~~~~~-g~~gsr~~~G~~~~~~lE~~~~~~la~l~----g----~~~alv~~~SG~~A~~~~l~al~ 111 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAE-GYPGKRYYGGCEFVDEVEALAIERAKQLF----G----CDYANVQPHSGSQANGAVYLALL 111 (416)
T ss_pred CHHHHHHhcchhhcCCCC-CCCCCcccCCChHHHHHHHHHHHHHHHHh----C----CCceEEecCCcHHHHHHHHHHhc
Confidence 688888888775322210 111111 122455665 556654 3 34564 46788999999999998
Q ss_pred cCCCCeEEEcCCcCcch-HHHHHH--hCCeE--EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 212 RSENDGILCPIPQYPLY-SASIAL--HGGTL--VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~-~~~~~~--~g~~~--~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
++||+|+++..+|.+. ...+.. .+... ..+..+.. ++.+|++++++.++.. ++++|++.++.+ |..
T Consensus 112 -~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~~~~--g~~ 182 (416)
T PRK13034 112 -KPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGFSAY--PRE 182 (416)
T ss_pred -CCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECCCcc--ccc
Confidence 8999999999988762 211111 12222 23433332 4568999999998653 578887766553 555
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
.+ +.+|.++|++||+++|+|+++....+..+....+ + .+ -.+++.|++|++. |-..|++++
T Consensus 183 ~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~-------~----~~-~Di~~~s~~K~l~---g~~GG~v~~- 243 (416)
T PRK13034 183 LD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNP-------F----PH-AHVVTTTTHKTLR---GPRGGMILT- 243 (416)
T ss_pred cC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCC-------C----CC-ceEEEEeCcccCC---CCCCeEEEE-
Confidence 55 8888999999999999999987544432211100 0 11 2377999999884 333577766
Q ss_pred cCCHHHHHHHHHhhhcc--ccCChHHHHHHHHHcCCCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCceEec
Q 009517 367 GFSAEVREQIYKVASVN--LCSNISGQILASLVMSPPKVGDESYESYC-AERDGILSSLARRAKTLEDAFNSLEGITCNK 443 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~~~--~~~~~~~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 443 (533)
.++++...+......+ .++.+...+++...+. +.. .+..+.++++.++.++|++.|.++ |+.+..
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~----------~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~ 311 (416)
T PRK13034 244 -NDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFG----------EALQPEFKTYAKQVIANAQALAEVLKER-GYDLVS 311 (416)
T ss_pred -CcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHH----------HHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEecc
Confidence 2445555554432221 2233333333222221 111 112344677888999999999988 888764
Q ss_pred C--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC---CCCCCCCceEEEEec------CCcCc
Q 009517 444 A--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG---FGQVPGTWHFRCTIL------PQEDK 512 (533)
Q Consensus 444 ~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~---f~~~~g~~~iRis~~------~~~e~ 512 (533)
+ +.. ..++.+..+. .....+.+.|+++||.+.+-.. ...+.....+|+++. .++++
T Consensus 312 ~~~~t~-i~~v~~~~~~------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~d 378 (416)
T PRK13034 312 GGTDNH-LLLVDLRPKG------------LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAE 378 (416)
T ss_pred CCCCCc-EEEEEcCCCC------------CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHH
Confidence 2 322 2333333211 1223344667888999975110 111112337999963 45789
Q ss_pred HHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKN 526 (533)
Q Consensus 513 i~~~~~~l~~~l~~ 526 (533)
|+++++.|++++.+
T Consensus 379 i~~l~~~l~~~~~~ 392 (416)
T PRK13034 379 FREIANWILDVLDD 392 (416)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988763
No 311
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=3.4e-16 Score=161.55 Aligned_cols=216 Identities=13% Similarity=0.083 Sum_probs=148.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~v~~ 244 (533)
...|.+.+|++.+ .+..+++++|+.|+..++..++ .+||+|+++...|.+.... +...|++++.++
T Consensus 71 ~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all-~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLA-GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHh-CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 4678888887764 3457888888999999999888 7999999999888775433 334677777774
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+. .|++.+++++++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|+++..-.. . .
T Consensus 141 d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~-~----~ 201 (436)
T PRK07812 141 DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL-I----R 201 (436)
T ss_pred CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-C----C
Confidence 21 289999998876 7999999999999999999 89999999999999999998864211 1 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC----------------------------HHHHHHH
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS----------------------------AEVREQI 376 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~----------------------------~~~~~~l 376 (533)
+ + .+ ..| +++.|++|.++| .|--+|.+++.... ++++..+
T Consensus 202 p---l--~~---GaD---ivv~S~tK~lgg-~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (436)
T PRK07812 202 P---L--EH---GAD---IVVHSATKYLGG-HGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKA 269 (436)
T ss_pred c---h--hc---CCC---EEEEecccccCC-CCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHH
Confidence 1 1 11 234 778999999944 55556666652110 0111111
Q ss_pred H--HhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 377 Y--KVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 377 ~--~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
. .........++..++.+..-|+ .+....++..++...+.+.|++.|++
T Consensus 270 ~~~~~~~~G~~l~p~~a~l~~rgl~--------------tL~~R~~~~~~nA~~la~~L~~~p~v 320 (436)
T PRK07812 270 RVQLLRDLGSAISPFNAFLIAQGLE--------------TLSLRIERHVANAQRVAEFLEARDEV 320 (436)
T ss_pred HHHHHHhcCCCCCHHHHHHHhcCcC--------------cHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1 1112445556665555544443 24445556677788899999887665
No 312
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.77 E-value=4.6e-16 Score=170.11 Aligned_cols=338 Identities=14% Similarity=0.106 Sum_probs=207.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-C------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-S------ 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~------ 213 (533)
++++++++.+++.+... +....-..+-...+|+.+.+..+ .-..++|+++++|++|++.+++..+. .
T Consensus 384 ~p~I~~Ai~~Qa~rl~h-----v~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~ 457 (817)
T PLN02974 384 QPELARAVAYAAGRYGH-----VMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGF 457 (817)
T ss_pred CHHHHHHHHHHHhhCCc-----cccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCC
Confidence 68999999999987432 11111123444556666654211 01136899999999999999998741 0
Q ss_pred -------------CCCeEEEcCCcCcchHHHHHHhCCe---------E------EEE--ecC---C-------CCC----
Q 009517 214 -------------ENDGILCPIPQYPLYSASIALHGGT---------L------VPY--YLD---E-------ATG---- 249 (533)
Q Consensus 214 -------------~gd~Vlv~~p~~~~~~~~~~~~g~~---------~------~~v--~~~---~-------~~~---- 249 (533)
...+|+....+|++-...+...+.. . ..+ |.. . ...
T Consensus 458 ~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~ 537 (817)
T PLN02974 458 LENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSG 537 (817)
T ss_pred CcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccc
Confidence 1246999999999865544443321 0 001 100 0 000
Q ss_pred -------CC-----CC------------HHHHHHHHHHHH--hcCCCeeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHH
Q 009517 250 -------WG-----LE------------TSEVKKQLEAAK--AKGITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKK 301 (533)
Q Consensus 250 -------~~-----ld------------~~~l~~~i~~~~--~~g~~~~~iil~~p-~NPtG~~-~s~~~l~~i~~l~~~ 301 (533)
|. .| .+.+++.|.... ..+.++.+||++.. ++-.|++ ++++.+++|.++|++
T Consensus 538 ~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~ 617 (817)
T PLN02974 538 LEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRS 617 (817)
T ss_pred ccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHH
Confidence 00 00 144566664311 12346888888874 6777875 578889999999999
Q ss_pred cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHH--
Q 009517 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK-- 378 (533)
Q Consensus 302 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~-- 378 (533)
||+++|+||++++|...|. +. ..+..++.|| |.+++|.+. .| +++|.+++ .+++.+.+..
T Consensus 618 ~gilLI~DEV~TGfGRtG~--~f-----a~e~~gv~PD-----Ii~~gKgLt--gG~~Plaa~l~---~~~I~~~f~~~~ 680 (817)
T PLN02974 618 RKIPVIFDEVFTGLWRLGV--ES-----AWELLGCKPD-----IACYAKLLT--GGLVPLAATLA---TEEVFEAFRGPS 680 (817)
T ss_pred hCCEEEEeecccCCCcccc--hh-----hHHhcCCCCC-----EEeeccccc--CCCCccEEEEE---cHHHHHhhcccc
Confidence 9999999999999877764 22 2233344788 667999995 48 69999998 9999988852
Q ss_pred ----h-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH----HHHHHhcCCCceEecCCceeE
Q 009517 379 ----V-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT----LEDAFNSLEGITCNKAEGAMY 449 (533)
Q Consensus 379 ----~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~L~~~~g~~~~~~~gg~~ 449 (533)
+ +..|++.++++++++.+.|+.-+. ...+ +.+.+.-.+..++ +.+.|.+.|.+.-++..|.|.
T Consensus 681 ~~~~~~hg~Ty~gnpl~cAaala~L~~~~~-~~~~-------~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~ 752 (817)
T PLN02974 681 KLDALLHGHSYTAHPMGCAAAAKALQWYKD-PSTN-------PNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVL 752 (817)
T ss_pred ccCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHH-------HHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEE
Confidence 1 347899999999999888752110 0011 1222222223333 333445556677788887665
Q ss_pred EecccCCCHHHHHHHHhcCCC--ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTV--PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
.+ .+..+.. ..+.. ....+...++.++||+++|. + +.||+.+. ++++++++++++|.+.+
T Consensus 753 ~i-el~~~~~------~~~~~~~~a~~v~~~~~~~~Gl~~r~~---G-----nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 753 AL-ELDAEGS------GSGYSSLYARSVVRRLRREDGIYARPL---G-----NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EE-EEecCCc------ccccchHHHHHHHHHHHHhCCEEEEec---C-----CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 53 2321110 00110 11233334442799999972 1 27887663 88899999999998765
No 313
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=1e-15 Score=160.37 Aligned_cols=326 Identities=14% Similarity=0.094 Sum_probs=197.7
Q ss_pred CHHHHHHHHHHHhcCC--CCCccc-cCCCcccHH----HHHHHHHHHHhhcCCCCCCCCEEEc---CChHHHHHHHHHHh
Q 009517 141 SADSIERAWQILDQIP--GRATGA-YSHSQGIKG----LRDTIAAGIEARDGFPADPNDIFLT---DGASPAVHMMMQLL 210 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~--~~~~~~-Y~~~~G~~~----lr~aia~~~~~~~g~~~~~~~i~~t---~G~~~al~~~~~~l 210 (533)
++.+++++...+.+.. +..... |....-... .|+.+++++ | .+++++.++ +|+++++..++..+
T Consensus 47 s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~~~~~~~~sgt~an~~v~~al 120 (452)
T PTZ00094 47 SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEWGVNVQPYSGSPANFAVYTAL 120 (452)
T ss_pred CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccceeecCCCchHHHHHHHHHHh
Confidence 6888888877776532 111111 111111222 233455554 4 456667666 78999999999999
Q ss_pred ccCCCCeEEEcCCcCcchHHHHHH----------hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 009517 211 IRSENDGILCPIPQYPLYSASIAL----------HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (533)
Q Consensus 211 ~~~~gd~Vlv~~p~~~~~~~~~~~----------~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~ 280 (533)
. ++||+|++....+..+...+.. .+.++..++.+. +..+|+++|++.++.. +++.|++. +
T Consensus 121 ~-~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l~~~-----~~~lvi~~--~ 190 (452)
T PTZ00094 121 L-QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELAKAF-----RPKLIIAG--A 190 (452)
T ss_pred c-CCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHHHHh-----CCCEEEEe--C
Confidence 7 7999999988777665433211 112334455554 3578999999999764 56666653 3
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee
Q 009517 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (533)
Q Consensus 281 NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri 360 (533)
+.+|...+ +++|.++|+++|+++++|+++.......+....++ . ..| +++.|.+|++. |-+.
T Consensus 191 s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~----~-----~~D---~l~~S~hK~l~---GP~G 252 (452)
T PTZ00094 191 SAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF----P-----YAD---VVTTTTHKSLR---GPRS 252 (452)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC----C-----CCc---EEEcCCccCCC---CCCc
Confidence 34899888 88888999999999999999976444221100010 0 123 77899999884 4445
Q ss_pred EEEEEecCCHHHHHHHHHhh-h-----ccccCChHHHHHHHHHcCCCCCCChhHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 009517 361 GYMEVTGFSAEVREQIYKVA-S-----VNLCSNISGQILASLVMSPPKVGDESYESY-CAERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 361 G~v~~~~~~~~~~~~l~~~~-~-----~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L 433 (533)
|++.+ ++++.+.+.... . ...+++....+++..+++ .. ....+...+++.++++++.+.|
T Consensus 253 g~l~~---~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~----------~~~~~~~~~~~~~i~~l~~~l~~~L 319 (452)
T PTZ00094 253 GLIFY---RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLK----------EVQSPEWKEYAKQVLKNAKALAAAL 319 (452)
T ss_pred eEEEE---ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHH----------HHhChhHHHHHHHHHHHHHHHHHHH
Confidence 77776 554443332211 1 112344444445555542 11 1234566778888899999999
Q ss_pred hcCCCceEecCCc-eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEE-EcCCCCCC-CCCCceEEEEec--C
Q 009517 434 NSLEGITCNKAEG-AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVL-VPGSGFGQ-VPGTWHFRCTIL--P 508 (533)
Q Consensus 434 ~~~~g~~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v-~pg~~f~~-~~g~~~iRis~~--~ 508 (533)
.+. |+.+..+.. ....++.+..+. . +...+..+|+++||.+ .+|..+.. ....+.||+|+. .
T Consensus 320 ~~~-g~~v~~~~~~~~~~~v~~~~~~----------~--~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~t 386 (452)
T PTZ00094 320 EKR-GYDLVTGGTDNHLVLVDLRPFG----------I--TGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALT 386 (452)
T ss_pred HhC-CcEEecCCCCCceEeecCCcCC----------C--CHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHH
Confidence 886 887764321 112333333221 1 2223456778889999 44443321 111248999994 3
Q ss_pred C----cCcHHHHHHHHHHHHHH
Q 009517 509 Q----EDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 509 ~----~e~i~~~~~~l~~~l~~ 526 (533)
+ +++|+++++.|.++++.
T Consensus 387 t~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 387 TRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred hCCCCHHHHHHHHHHHHHHHHH
Confidence 3 79999999999998875
No 314
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.77 E-value=2e-18 Score=164.35 Aligned_cols=299 Identities=18% Similarity=0.231 Sum_probs=180.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC--C---CCeEEEcCCcCcchHHHHHHhCCeEEEEe
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS--E---NDGILCPIPQYPLYSASIALHGGTLVPYY 243 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~---gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~ 243 (533)
.++|.+.|.++.....+...+...|++++|+++++..++-+|... + --.|+...|.|+.|......+.-....+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 578899998888766666666678999999999999999998522 1 13699999999999987766544433333
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCc
Q 009517 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (533)
Q Consensus 244 ~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~ 323 (533)
-+.. .|. +-+ .+.+-.=++++||||.|.+ .+.++ +.-+..+|-|-+|..=.|++-
T Consensus 125 Gda~-~~~-~~~------------~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTpI--- 179 (363)
T PF04864_consen 125 GDAS-NFK-NSD------------NPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTPI--- 179 (363)
T ss_dssp EECC-CGT-T-S-------------CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS-----
T ss_pred ccHH-hhc-cCC------------CCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccccc---
Confidence 3322 231 100 0123334788999999987 34433 444567899999987445431
Q ss_pred ccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCC
Q 009517 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (533)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~ 402 (533)
..- . +.| |.+.|+||.- |-+|-|+||.++ .++++.+.|..... .+.+++.=+|.-+..+|+...
T Consensus 180 ---~~~---a---D~D---iMLFT~SK~T-GHAGSR~GWAlV--KD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~ 244 (363)
T PF04864_consen 180 ---TAP---A---DHD---IMLFTLSKLT-GHAGSRFGWALV--KDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVL 244 (363)
T ss_dssp ----S----B-----S---EEEEEHHHHC-S-GGG-EEEEEE--S-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHH
T ss_pred ---CCC---C---CCc---eEEEEEeccc-Cccccccceeee--cCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHH
Confidence 111 1 345 8899999976 899999999998 68889998888766 778888888877776664211
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-------------ecCCceeEEecccCCCHHHHHHHHhcCC
Q 009517 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC-------------NKAEGAMYLFPRIQLPEKAIKAAEAEKT 469 (533)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-------------~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 469 (533)
.+........+..+--++.+++|.+.|++.+..-.-+.+ +.....-|.|++++-++
T Consensus 245 ~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee----------- 313 (363)
T PF04864_consen 245 DGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE----------- 313 (363)
T ss_dssp HHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG-----------
T ss_pred hcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc-----------
Confidence 000000000001122334567777778888765311221 11123448999887442
Q ss_pred CChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 470 VPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 470 ~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
+++ |...|++.||.-+.|..||..+. |+|||+..++++++.++++|..+
T Consensus 314 --d~D-C~~~l~~~~I~tr~G~~fga~~r--yVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 314 --DED-CYAVLREAKIITRSGVLFGADSR--YVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp --GSS-HHHHHHCTTEEEEEGGGGTS-TT--EEEEESSS-HHHHHHHHHHHHCC
T ss_pred --ccc-HHHHHHhCCcccCCCCccCCCCC--eEEEeccCCHHHHHHHHHHHHhh
Confidence 112 55778899999999999996444 99999999999999999999764
No 315
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.75 E-value=4.2e-17 Score=164.03 Aligned_cols=272 Identities=16% Similarity=0.120 Sum_probs=178.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc------cCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI------RSE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~------~~~ 214 (533)
++++.+++.+++.... . ........+...++++.+.+..+ -..+++++++++++|++.+++..+ ..+
T Consensus 34 ~p~i~~ai~~~~~~~~----~-~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~ 106 (339)
T PF00202_consen 34 HPEIAEAIAEQANKLN----Y-VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSEAVEAALKLARQYHNKRAYT 106 (339)
T ss_dssp -HHHHHHHHHHHHHCS----S-CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccccchhHHHHhhhcc----c-ccccceeccchhhhhhhhhhccc--cccceeeeccCchHHHHHHHHHhhccccccccc
Confidence 6899999999888732 1 12122245566677777776643 246799999999999999999887 333
Q ss_pred C-CeEEEcCCcCcchHHHHHHhC-------------CeEEEEecCCCCC---CCCCHHHHHHHHHHHHhcCCCeeEEEEe
Q 009517 215 N-DGILCPIPQYPLYSASIALHG-------------GTLVPYYLDEATG---WGLETSEVKKQLEAAKAKGITVRALVVI 277 (533)
Q Consensus 215 g-d~Vlv~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~---~~ld~~~l~~~i~~~~~~g~~~~~iil~ 277 (533)
+ .+|+....+|++........+ ..+..+|...... ..-..+.+++.+.... ..++.+||++
T Consensus 107 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~iaavivE 184 (339)
T PF00202_consen 107 GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALN--ADEIAAVIVE 184 (339)
T ss_dssp TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH--GGGEEEEEEE
T ss_pred CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhc--CCcEEEEEEe
Confidence 3 789999999998664333321 1234555442100 0001122444443322 2268888888
Q ss_pred CCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC
Q 009517 278 NPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (533)
Q Consensus 278 ~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~ 356 (533)
..+...|. .++++.+++|.++|++||+++|+||+++++...|. +..+.. .++ .|| +.+|+|.++ .
T Consensus 185 Pi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~--~~a~~~--~gv---~PD-----iv~~gK~l~--g 250 (339)
T PF00202_consen 185 PIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK--FFASEH--YGV---DPD-----IVTFGKGLG--G 250 (339)
T ss_dssp SSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS--SSGHHH--HTS---SSS-----EEEEEGGGG--T
T ss_pred ccccccCccccccchhhehcccccccccceecccccccccccCC--ccceec--ccc---cCc-----ccccccchh--h
Confidence 76666675 55677899999999999999999999999877664 333222 233 688 556789995 4
Q ss_pred CCeeEEEEEecCCHHHHHHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 357 GKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 357 G~riG~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
|+++|.+++ .+++++.+.... ..|++.++++++++.+.|+ ..+. +.+.++.+++.+++.+.|++
T Consensus 251 G~p~sav~~---~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~-----------~~~~-~~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 251 GLPISAVLG---SEEIMEAFQPGSHGSTFGGNPLSCAAALATLE-----------ILEE-EDLLERVRELGERLREGLRE 315 (339)
T ss_dssp TSSEEEEEE---EHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHH-----------HHHH-TTHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccc---cchhhccccccccccccccchHhhhhhhhHHH-----------hhcc-HHHHHHHHHHHHHHHHHHHH
Confidence 899999998 889888774433 3778899999999988874 1221 33556666666677777665
Q ss_pred C----CCceEecCCceeEE
Q 009517 436 L----EGITCNKAEGAMYL 450 (533)
Q Consensus 436 ~----~g~~~~~~~gg~~~ 450 (533)
+ +-+.-++..|.|+.
T Consensus 316 l~~~~~~i~~vrg~Gl~~~ 334 (339)
T PF00202_consen 316 LAARYPLIGEVRGIGLMIG 334 (339)
T ss_dssp HHHHTTTEEEEEEETTEEE
T ss_pred HHHhCCCeEEEeeeCeEEE
Confidence 4 44666777776654
No 316
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.75 E-value=4e-15 Score=148.73 Aligned_cols=216 Identities=14% Similarity=0.152 Sum_probs=158.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~g~~~~~v~~ 244 (533)
...|.++++++-+ .+..+.+++|+.|+..++..++ ++||.|+++...|.+-.. .++..|.++..++.
T Consensus 65 ~~~lE~~~a~LEg--------~~~~~afsSGmaAI~~~~l~ll-~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~ 135 (396)
T COG0626 65 RDALEEALAELEG--------GEDAFAFSSGMAAISTALLALL-KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP 135 (396)
T ss_pred HHHHHHHHHHhhC--------CCcEEEecCcHHHHHHHHHHhc-CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC
Confidence 5677777777742 6788999999999999999998 799999999998887443 44557877776653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
. +.+.+++++.+. ++++|++++|.|||-.+.+ +.+|+++|+++|+++|+|+.|..-++.. |
T Consensus 136 ~-------~~~~~~~~~~~~-----~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~--P-- 196 (396)
T COG0626 136 G-------DDEALEAAIKEP-----NTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR--P-- 196 (396)
T ss_pred C-------ChHHHHHHhccc-----CceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC--h--
Confidence 2 556677776632 7999999999999999888 9999999999999999999998755432 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh--ccccCChHHHHHHHHHcCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPPK 402 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~ 402 (533)
+ ++ ..| |++.|.+|.++|-...=.|.+++ .++++.+.+..... .....++..++.+.+-|+
T Consensus 197 ----L--~~---GaD---IVvhSaTKyl~GHsDvl~G~v~~--~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk--- 259 (396)
T COG0626 197 ----L--EL---GAD---IVVHSATKYLGGHSDVLGGVVLT--PNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR--- 259 (396)
T ss_pred ----h--hc---CCC---EEEEeccccccCCcceeeeEEec--ChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc---
Confidence 1 11 234 89999999996644466786664 24555565533322 445567777776666553
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
.+..+.++..++...+.+.|.+.|.++
T Consensus 260 -----------TL~~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 260 -----------TLALRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 244455666777888999998876654
No 317
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.74 E-value=5.7e-17 Score=146.45 Aligned_cols=167 Identities=18% Similarity=0.224 Sum_probs=129.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH-HHHHHhCCeEEEEecCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS-ASIALHGGTLVPYYLDEA 247 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~-~~~~~~g~~~~~v~~~~~ 247 (533)
+.++++.++++++ .+.+++++++|+++|+..+++.+. .++++|+++.++|++.. ..+...|.++..++.+..
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehhhHHHhcCCEEEEeccCCC
Confidence 4578888888874 457899999999999999999998 67999999999999988 888889999999998765
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHH
Q 009517 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (533)
Q Consensus 248 ~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~ 327 (533)
.....+.+.+++.... .+++++++++++||+|...+ .++|+++|+++|+++|+|++|..+...... ..
T Consensus 75 ~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~~-- 142 (170)
T cd01494 75 GYGGLDVAILEELKAK-----PNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG--VL-- 142 (170)
T ss_pred Cccchhhhhhhhcccc-----CceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc--cc--
Confidence 4333343355443322 37899999999999999988 588889999999999999999986654311 00
Q ss_pred HHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 328 ~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
. ... .. .+++.|++|.+ | +.++|++++
T Consensus 143 -~-~~~---~~---d~~~~s~~K~~-~--~~~~G~l~~ 169 (170)
T cd01494 143 -I-PEG---GA---DVVTFSLHKNL-G--GEGGGVVIV 169 (170)
T ss_pred -c-ccc---cC---CEEEEEccccc-C--CCceEEEEe
Confidence 0 111 23 37789999998 4 478999875
No 318
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.74 E-value=2.1e-15 Score=152.06 Aligned_cols=315 Identities=14% Similarity=0.132 Sum_probs=207.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccH---HHHHHHHHHHHhhcCCCCCCCCEEEcCC-hHHHHHHHHHHhccCCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIK---GLRDTIAAGIEARDGFPADPNDIFLTDG-ASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~---~lr~aia~~~~~~~g~~~~~~~i~~t~G-~~~al~~~~~~l~~~~gd 216 (533)
|..|++++.+.+.+..+.+...|....-.+ ++.+.+.+.+...++.+ +..+|++++| ++.|++.++..+. .+|+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~-~~~~ 81 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLL-AEGK 81 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcC-CCCC
Confidence 789999999988753322233333222123 55555666666666631 2346888876 9999999999998 6899
Q ss_pred eEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 217 GILCPIPQYPL--YSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 217 ~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~--~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
++++..-+..+ +..+++..|. +..+..++..+| .+|+++++. ++ ++++|.+++-.|.||+..+
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~---- 148 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR---- 148 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc----
Confidence 88877766555 4567788898 777775532222 356666552 22 7899999999999999865
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
++++.+++++++|.+.+- |..+ ..+. ++ + +++.|..|++ |++| +|++.+ ++++
T Consensus 149 ----~l~~~~~~l~iVDavss~----g~~~-id~~----~~-----d---~~~~ssqK~l-gP~G--lg~l~~---s~~~ 201 (349)
T TIGR01364 149 ----ELPDVKNAPLVADMSSNI----LSRP-IDVS----KF-----G---LIYAGAQKNI-GPAG--LTVVIV---RKDL 201 (349)
T ss_pred ----eecccCCCeEEEEccccc----cCcc-CCHH----Hc-----c---EEEEeccccc-CCCc--eEEEEE---CHHH
Confidence 566678999999999974 3222 2221 11 2 7788889998 7888 466665 7877
Q ss_pred HHHHHHh----------h--h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCC
Q 009517 373 REQIYKV----------A--S-VNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFNSLE 437 (533)
Q Consensus 373 ~~~l~~~----------~--~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~ 437 (533)
++++... . . ..++++....+++.++|+. ..+ .++.+.++.++..+++++.|++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~----------l~~~gG~e~i~~r~~~l~~~l~~~l~~~~ 271 (349)
T TIGR01364 202 LGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKW----------LKEQGGVKAIEKRNQAKAQLLYDTIDNSN 271 (349)
T ss_pred HhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHH----------HHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7655321 1 1 2246677777777777641 222 277888889999999999999997
Q ss_pred CceEec--C--Cc-eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCc
Q 009517 438 GITCNK--A--EG-AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQE 510 (533)
Q Consensus 438 g~~~~~--~--~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~ 510 (533)
|+.... + .. ....+ ..|.. ..+..+ ...+.++|+++.+|... .+ .||+|+. ++.
T Consensus 272 gl~~~~~~~~~rs~~v~sf---~~~~~----------~~~~~~-~~~~~~~Gi~~~~~~~~---~g--~vRvS~~~~nt~ 332 (349)
T TIGR01364 272 GFYRNPVDPRNRSRMNVVF---TLGNE----------ELEKRF-LKEAEERGLVSLKGHRS---VG--GMRASIYNAMPL 332 (349)
T ss_pred CeeccCCCHHHcCCeEEEE---ecCCh----------hHhHHH-HHHHHHCCCcccCCccc---cC--eeEEECcCCCCH
Confidence 754332 1 12 22222 22210 011222 24567799988776551 22 8999995 889
Q ss_pred CcHHHHHHHHHHHHHH
Q 009517 511 DKIPAIVTRLTDFHKN 526 (533)
Q Consensus 511 e~i~~~~~~l~~~l~~ 526 (533)
++|+.++++|++++++
T Consensus 333 edid~l~~al~~~~~~ 348 (349)
T TIGR01364 333 EGVQALVDFMKEFQKK 348 (349)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987654
No 319
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.1e-15 Score=141.41 Aligned_cols=315 Identities=16% Similarity=0.182 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
.+..+++.++... ..-|+...-...|.+.+|+..++.- -.++++ |+.+..++++..+..+|.+|++.
T Consensus 36 deMr~am~eA~vg-----DdVyGeD~tt~rLE~~vA~l~GKEA-------gLFv~S-GTmgNllaIm~Hc~~rg~eii~g 102 (384)
T KOG1368|consen 36 DEMRRAMAEASVG-----DDVYGEDPTTNRLEQRVAELFGKEA-------GLFVPS-GTMGNLLAIMVHCHQRGSEIIVG 102 (384)
T ss_pred HHHHHHHhhcccC-----cccccCCccHHHHHHHHHHHhCccc-------eeeecc-cccccHHHHHHHhcCCCceEEec
Confidence 4445555544433 2335444446899999999986432 245555 45556666666654689999998
Q ss_pred CCcCc-chHH--HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH--hcCCCeeEEEEeCCCCCCc-cCCCHHHHHHH
Q 009517 222 IPQYP-LYSA--SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK--AKGITVRALVVINPGNPTG-QVLAEENQRAI 295 (533)
Q Consensus 222 ~p~~~-~~~~--~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~--~~g~~~~~iil~~p~NPtG-~~~s~~~l~~i 295 (533)
+-++. .|.+ +..+.|+.+.++...+ +..+|+++++.+++..+ -..+.+++|++.|-+|-+| .++|.+++.++
T Consensus 103 d~~HI~~~E~gg~s~l~gv~~~tv~~e~--dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v 180 (384)
T KOG1368|consen 103 DRAHIHRYEQGGISQLAGVHVRTVKNEN--DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRV 180 (384)
T ss_pred cchheeehhccChhhhccceeEeeeeCC--CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHH
Confidence 87764 2333 3455577776666544 44789999999998532 2346799999998876555 99999999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
.+||++||+-+.+|.+--.-.- -....++..++... +. + --.|||.+ |.++|-+++ .++++++.
T Consensus 181 ~~lak~~glkLH~DGARi~NAa--vasgV~vk~i~~~f----DS---V-siCLSKgl----gAPVGSViV--G~k~FI~k 244 (384)
T KOG1368|consen 181 KALAKRHGLKLHMDGARIFNAA--VASGVPVKKICSAF----DS---V-SICLSKGL----GAPVGSVIV--GSKDFIDK 244 (384)
T ss_pred HHHHhccCCeeecchhhhhhHH--HHcCCCHHHHHHhh----hh---h-hhhhhccC----CCCcccEEE--ccHHHHHH
Confidence 9999999999999987532111 11234555655543 12 1 23589977 678998877 59999988
Q ss_pred HHHhhh-ccccCChHHH--HHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC--CceeEE
Q 009517 376 IYKVAS-VNLCSNISGQ--ILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA--EGAMYL 450 (533)
Q Consensus 376 l~~~~~-~~~~~~~~~q--~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~gg~~~ 450 (533)
.+.++. ...+.-..+. +|+..+|+. .-...+.-.++...|.+.++..+++.+.-| +.. ++
T Consensus 245 A~~~RKalGGGmRQsGvLaaaaLval~~--------------~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etN-iv 309 (384)
T KOG1368|consen 245 ARHFRKALGGGMRQSGVLAAAALVALDE--------------NVPLLRADHKRAKELAEYINTPEEIRVEVPAVETN-IV 309 (384)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHHhhc--------------chHHHHHHHHHHHHHHHHhccccceeeecchhhcc-ee
Confidence 877664 3333333333 333333321 111233334556677778877755776544 333 33
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
.+.+.-+ +++ .+.++ +.++++||.+.+|..+ .+||.+. ++.++++.++..+.
T Consensus 310 ~~~l~q~----------~~~-~~~l~-~~~~k~gi~lm~~~s~-------r~Rivlh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 310 NMVLCQA----------RLT-AEELC-KFLEKNGILLMGGASR-------RIRIVLHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred eeecccc----------cCC-HHHHH-HHHHHCCeEEeecccc-------ceEEEEEEecCHHHHHHHHHHHH
Confidence 3222211 122 33444 4567899999987654 4799995 89999999998884
No 320
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=3.2e-15 Score=154.40 Aligned_cols=216 Identities=13% Similarity=0.109 Sum_probs=147.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH----HHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~ 244 (533)
...|++.++++.+ .+..+++++++.|+.+++..++ .+||+|+++...|.... ..+...|++++.++
T Consensus 71 ~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll-~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 71 VEALENRIASLEG--------GVHAVAFASGQAAETAAILNLA-GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhc-CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 5677777777764 2345555556688888888887 79999999999998763 34566799998887
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+. .|++.++++|++ ++++|+++++.||+|.+.+ +++|+++|+++|+++|+|.++..... ..
T Consensus 141 ~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~-----~~ 201 (437)
T PRK05613 141 NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL-----VR 201 (437)
T ss_pred CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc-----cC
Confidence 22 278999999987 7999999999999999988 99999999999999999999864221 11
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC---------------------------------HH
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS---------------------------------AE 371 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~---------------------------------~~ 371 (533)
+. ++ ..| +++.|++|.+ +-.|--+|-+++.+.+ .+
T Consensus 202 p~-----~~---GaD---ivv~S~~K~l-~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (437)
T PRK05613 202 PL-----EL---GAD---VVVASLTKFY-TGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPA 269 (437)
T ss_pred hH-----Hh---CCC---EEEeecccee-cCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHH
Confidence 11 11 234 7899999988 4355444544441101 00
Q ss_pred HHHHHH-Hhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 372 VREQIY-KVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 372 ~~~~l~-~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
++.... ... ....+.++..++.+..-|+ .+....++..++...+.+.|++.|.+
T Consensus 270 ~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~--------------TL~lR~~~~~~nA~~lA~~L~~hp~V 325 (437)
T PRK05613 270 FGLKARAGLLRDTGATLSPFNAWVTAQGLD--------------TLSLRLERHNENAIKVAEFLNNHEKV 325 (437)
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHcccC--------------cHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 000011 111 2445566777666655553 23445556677788899999987664
No 321
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=3e-15 Score=152.03 Aligned_cols=211 Identities=13% Similarity=0.129 Sum_probs=147.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch----HHHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~ 244 (533)
..+|.+.++++.+ .+..+++++++.|+.+++.+++ ++||+|+++.+.|.+. ...+...|++++.++.
T Consensus 66 ~~~lE~~la~leg--------~~~av~~sSG~aAi~~al~all-~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 66 VQAFEEKYAVLEN--------AEHALSFSSGMGAITSAILSLI-KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 5677888888764 4568888999999999999988 8999999988766653 3566778999999988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
++.+++.++. .++++|++.+|.|||+.+.+ +++|+++|++++ +++|.++..- +.+. +
T Consensus 137 ~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~~-p-- 193 (384)
T PRK06434 137 DRLNSLDFDP--------------SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQN-P-- 193 (384)
T ss_pred CChhheeecC--------------CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccCC-c--
Confidence 6533343321 16899999999999999876 999999999998 4569997432 2111 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~ 403 (533)
+ +. ..| +++.|.+|.++|..+.-.|.++. .++++.+.+..... .....+++.++.+..-|+
T Consensus 194 -l-----~~---gaD---ivv~S~tK~i~G~~d~~gG~vv~--~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~---- 255 (384)
T PRK06434 194 -L-----DL---GAD---VVIHSATKYISGHSDVVMGVAGT--NNKSIFNNLVERRKTLGSNPDPIQAYLALRGLK---- 255 (384)
T ss_pred -h-----hc---CCC---EEEeecccccCCCCCceEEEEec--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCC----
Confidence 1 11 234 78899999995422255677765 35667676665542 444556666555555443
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.+..+.++.+++...+.+.|+..|.+
T Consensus 256 ----------tL~~R~~r~~~~a~~~a~~L~~~p~v 281 (384)
T PRK06434 256 ----------TLGLRMEKHNKNGMELARFLRDSKKI 281 (384)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 24445566677777888888887665
No 322
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.73 E-value=4.2e-15 Score=150.17 Aligned_cols=325 Identities=16% Similarity=0.162 Sum_probs=210.1
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH-HHHhCCeE
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGGTL 239 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~-~~~~g~~~ 239 (533)
..|.....+.+|.++++++++ .+.++.+++|+.|+.++....+ +|||+| +.++|..-... +...|+.+
T Consensus 65 e~yag~~s~~~lE~~va~~~G--------~~~av~v~sGT~Al~ll~~l~l-~pGDeV--psn~~f~Tt~ahIe~~Gav~ 133 (450)
T TIGR02618 65 EAYAGSRNFYHLERTVRELYG--------FKYVVPTHQGRGAENLLSQIAI-KPGDYV--PGNMYFTTTRYHQEKNGATF 133 (450)
T ss_pred hhhcCCCcHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHhCC-CCcCEE--CCceeHHHHHHHHHhCCeEE
Confidence 358877778999999999975 5679999999999998776666 799977 67777554443 67888877
Q ss_pred EEEecCC--------CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC-CCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 240 VPYYLDE--------ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 240 ~~v~~~~--------~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N-PtG~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+.++.++ ..++.+|++.++++|++.. ..+++.|.+++++| .+|.++|.+++++|.++|++||+.||.|.
T Consensus 134 vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~Da 211 (450)
T TIGR02618 134 VDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDA 211 (450)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHhcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7665441 2356789999999998631 12456788888888 55899999999999999999999999999
Q ss_pred cccc-c-cc----cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhc--
Q 009517 311 VYQE-N-VY----VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV-- 382 (533)
Q Consensus 311 ~y~~-~-~~----~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~-- 382 (533)
+... - .| .++-...++..+..++.. +.| .+..|..|.. |.++|-+++. .++++.++++.....
T Consensus 212 AR~~gNA~~I~~re~g~~~~~i~ei~~e~~~-~aD---~~~~S~~Kd~----~~~~GG~l~~-~d~~l~~k~r~~~~~~e 282 (450)
T TIGR02618 212 TRCVENAYFIKEREQGYEDKSIAEILKEMMS-YAD---GCTMSGKKDC----LVNIGGFLCM-NDDEMFQSAKELVVVFE 282 (450)
T ss_pred cchhhChhhhhcccccccCCCHHHHHHHHhc-cCc---EEEEeeccCC----CCCCceEEEe-CCHHHHHHHHHHhhhcC
Confidence 8753 1 11 111223456566666532 344 4677888876 3454444442 388899888776421
Q ss_pred ---cccC-ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccC--C
Q 009517 383 ---NLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQ--L 456 (533)
Q Consensus 383 ---~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~--~ 456 (533)
+++. ..-...+++..|.. ..++ ...++-....++|.+.|.+. |+.++.|.||.-+|++.. +
T Consensus 283 G~~tyGgla~r~~~ala~gL~e----------~~~~--~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~l 349 (450)
T TIGR02618 283 GMPSYGGLAGRDMEAMAIGIRE----------AVDY--EYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFL 349 (450)
T ss_pred CccccCchhhhhHHHHHHHHHH----------hhhH--HHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhC
Confidence 1111 11122222223321 1111 11122233467899999998 999988888888887643 1
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-CCC-CCCC--CC------CceEEEEec---CCcCcHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-GSG-FGQV--PG------TWHFRCTIL---PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g~~-f~~~--~g------~~~iRis~~---~~~e~i~~~~~~l~~~ 523 (533)
|.-- .... ....++.++..+.||--.- |+. ++.. .+ -..+|+++. -|.+.++..+++|..+
T Consensus 350 ph~~-----~~~~-p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 423 (450)
T TIGR02618 350 PHIP-----QDQF-PAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKL 423 (450)
T ss_pred CCCC-----hhhC-hHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHH
Confidence 2100 0011 2334455667778875332 332 1211 11 137999993 6778899999999887
Q ss_pred HHH
Q 009517 524 HKN 526 (533)
Q Consensus 524 l~~ 526 (533)
.++
T Consensus 424 ~~~ 426 (450)
T TIGR02618 424 YKH 426 (450)
T ss_pred Hhh
Confidence 765
No 323
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.73 E-value=5.4e-15 Score=145.70 Aligned_cols=187 Identities=18% Similarity=0.202 Sum_probs=147.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH----HhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~----~~g~~~~~v~~ 244 (533)
...|.+.+++..+ ...++++++|+.|+..++..++ ..|+.|+.....|.+-..+++ .+|++...+.+
T Consensus 79 ~~~le~~iaal~g--------a~~~l~fsSGmaA~~~al~~L~-~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 79 RDVLESGIAALEG--------AAHALLFSSGMAAITVALLHLL-PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred hHHHHHHHHHHhC--------CceEEEecccHHHHHHHHHHhc-CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 4566666766643 4569999999999999999998 789999999999998665544 46777777765
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+ |++++++++++ ++++|++++|.||+..+.+ +++|+++|+++|+++++|+.+....+-..
T Consensus 150 ~-------~~~~~~~~i~~------~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~p---- 209 (409)
T KOG0053|consen 150 D-------DLKKILKAIKE------NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQDP---- 209 (409)
T ss_pred h-------hHHHHHHhhcc------CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccCh----
Confidence 4 57888888877 7999999999999999988 99999999999999999999987544221
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHc
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVM 398 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L 398 (533)
..+ ..| |++.|.+|.++|-..+=.|.++. ...++.+.+...+. ..++.+++.+....+-|
T Consensus 210 --L~l-------GAD---IV~hSaTKyi~Ghsdvi~G~iv~--n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rgl 270 (409)
T KOG0053|consen 210 --LPL-------GAD---IVVHSATKYIGGHSDVIGGSVVL--NSEELASRLKFLQEDLGWCEDPFDLFLLSRGL 270 (409)
T ss_pred --hhc-------CCC---EEEEeeeeeecCCcceeeeEEec--CcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCc
Confidence 111 245 88999999997655577888876 24888888888776 77888888877766555
No 324
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.73 E-value=1.9e-15 Score=154.03 Aligned_cols=281 Identities=19% Similarity=0.264 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
.+.++++.+.+.+.. ...++ .-..+|.++++++++ .++++.+++++.|+.+++.++-.++||+|++|
T Consensus 5 ~e~~~~v~~~l~s~~---~~~~g--~~~~~fE~~~a~~~g--------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p 71 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGW---LSTYG--PYVEEFEKEFAEYFG--------VKYAVAVSSGTSALHLALRALGLGPGDEVIVP 71 (363)
T ss_dssp HHHHHHHHHHHHHTC---CSSSS--HHHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEE
T ss_pred HHHHHHHHHHHHhCC---ccCCC--HHHHHHHHHHHHHhC--------CCeEEEeCChhHHHHHHHHhcCCCcCceEecC
Confidence 567778888887621 12222 226789999999975 57899999999999999999843689999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~ 301 (533)
.-+|.....++...|++++.++++++ ++.+|++.++++|++ ++++|++.|.. |... ++.+|.++|++
T Consensus 72 ~~t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~------~t~ai~~~h~~---G~~~---d~~~i~~~~~~ 138 (363)
T PF01041_consen 72 AYTFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITP------KTKAILVVHLF---GNPA---DMDAIRAIARK 138 (363)
T ss_dssp SSS-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHT------TEEEEEEE-GG---GB------HHHHHHHHHH
T ss_pred CCcchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhcc------CccEEEEecCC---CCcc---cHHHHHHHHHH
Confidence 99999999999999999999999965 889999999999998 89999988763 3333 49999999999
Q ss_pred cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecC--CccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 302 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
+|++||+|.+++....-.+.+..+ ..+ +.+.|| +|.+. +| -.|++++ .++++.+.++.+
T Consensus 139 ~~i~lIeD~a~a~g~~~~g~~~G~-----------~gd---~~~fSf~~~K~i~--~g-eGG~v~~--~~~~~~~~~~~~ 199 (363)
T PF01041_consen 139 HGIPLIEDAAQAFGARYKGRPVGS-----------FGD---IAIFSFHPTKIIT--TG-EGGAVVT--NDPELAERARAL 199 (363)
T ss_dssp TT-EEEEE-TTTTT-EETTEETTS-----------SSS---EEEEESSTTSSS---SS-S-EEEEE--STHHHHHHHHHH
T ss_pred cCCcEEEccccccCceeCCEeccC-----------CCC---ceEecCCCCCCCc--CC-CCeeEEe--cHHHHHHHhhhh
Confidence 999999999998643322211111 123 557777 58773 34 4588877 478888888776
Q ss_pred hhcc------------------ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 380 ASVN------------------LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 380 ~~~~------------------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
...+ +..+.+..+++..-| +.++...++-+++.+.+.+.|..++++..
T Consensus 200 ~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL--------------~~L~~~~~~R~~~a~~y~~~L~~~~~~~~ 265 (363)
T PF01041_consen 200 RNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQL--------------KRLDEIIARRRENAQRYREALAGIPGIKP 265 (363)
T ss_dssp TBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHH--------------HTHHHHHHHHHHHHHHHHHHHTTGTTEEE
T ss_pred hccCcCccccccccccccCCcccccHHHHHHHHHHHH--------------HHhhhhHHHHHHHHHHHHHHHhcCCCccc
Confidence 5311 122333333333333 33455555556677788889998887754
Q ss_pred ec-CCc----eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCC
Q 009517 442 NK-AEG----AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGS 491 (533)
Q Consensus 442 ~~-~~g----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 491 (533)
.. +.+ .++.++ +.++... ...-+. +.+.|.+.||...+..
T Consensus 266 ~~~~~~~~~~~~~~f~-i~~~~~~--------~~~rd~-l~~~L~~~GI~~~~~~ 310 (363)
T PF01041_consen 266 PPIPDGAERSSYYRFP-IRLPDEA--------LADRDE-LVEALRARGIETRPHY 310 (363)
T ss_dssp EGCGTTTEEBCESSEE-EEETCCG--------CSTHHH-HHHHHHHTTBEEBCST
T ss_pred cccccccccccccccc-ccccccc--------cchHHH-HHHHHHHCCCcccccc
Confidence 33 222 121211 2222100 001223 3466778899998755
No 325
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.73 E-value=4e-15 Score=165.64 Aligned_cols=309 Identities=12% Similarity=0.073 Sum_probs=194.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH---HHhCCeEEEEe
Q 009517 169 IKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYY 243 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~ 243 (533)
+.+.|+.+|++++ .+++ .|++|+|+|+++.+++..+...+||+|++..-.|.+..... +..|+++..++
T Consensus 80 ~e~aR~~ia~~lg------a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~ 153 (805)
T PLN02724 80 IESARQQVLEYFN------APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVD 153 (805)
T ss_pred HHHHHHHHHHHhC------CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEecc
Confidence 5677888888775 4444 58999999999999999884368999999877776655443 34588998888
Q ss_pred cCCCC------CCCCCH--HHHHHHHHH----HHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-----CCEE
Q 009517 244 LDEAT------GWGLET--SEVKKQLEA----AKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-----GLVL 306 (533)
Q Consensus 244 ~~~~~------~~~ld~--~~l~~~i~~----~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~-----~~~l 306 (533)
++.+. ...+++ +.|++.++. ....++++++|.+.+.+|-||.++|.+.++++.+.++++ ++++
T Consensus 154 ~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v 233 (805)
T PLN02724 154 IEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMV 233 (805)
T ss_pred chhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEE
Confidence 76221 112332 566665421 001123578999999999999999955443333322222 3689
Q ss_pred EEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-----
Q 009517 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS----- 381 (533)
Q Consensus 307 I~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~----- 381 (533)
++|.++.- |..+ .++.. + ..| +++.|+.|.++|+.| +|++++ .+++.+.+.+...
T Consensus 234 ~vDaaQ~~----g~~p-iDv~~----~---~~D---fl~~S~HK~~GgP~G--~G~L~v---r~~~~~~l~p~~~GGg~~ 293 (805)
T PLN02724 234 LLDAAKGC----GTSP-PDLSR----Y---PAD---FVVVSFYKIFGYPTG--LGALLV---RRDAAKLLKKKYFGGGTV 293 (805)
T ss_pred Eeehhhhc----CCCC-CChhh----c---CCC---EEEEecceeccCCCC--ceEEEE---ehhhhhhhcCCccCCCce
Confidence 99999864 3222 23222 2 345 778899998732445 577776 6776665543210
Q ss_pred --------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCC--
Q 009517 382 --------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFNSLE-- 437 (533)
Q Consensus 382 --------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-- 437 (533)
...+++..+..++.++++ +.. .++.+.++..+..+++.+.|.+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~-----------~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~ 362 (805)
T PLN02724 294 AASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK-----------LLNRLTISAIAMHTWALTHYVANSLRNLKHG 362 (805)
T ss_pred EEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH-----------HHHHhChHHHHHHHHHHHHHHHHHHHhccCC
Confidence 012344455555555542 112 246677788888999999998885
Q ss_pred ----CceEecC---------CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC--------
Q 009517 438 ----GITCNKA---------EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-------- 496 (533)
Q Consensus 438 ----g~~~~~~---------~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-------- 496 (533)
++.++.+ +++.+.|. +.... +..-....+..++.++||.++.|..+...
T Consensus 363 ~g~~~v~iyg~~~~~~~~~~r~~ivsFn-v~~~~---------~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~ 432 (805)
T PLN02724 363 NGAPVCVLYGNHTFKLEFHIQGPIVTFN-LKRAD---------GSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGL 432 (805)
T ss_pred CCCeEEEEcCCCCCCCCcccccCEEEEE-EEcCC---------CCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCC
Confidence 4666643 34555442 22000 00011222456778889999999876411
Q ss_pred -----------------------C-CCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 497 -----------------------P-GTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 497 -----------------------~-g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
. ..+.||+|++ .|.+||+++++.|++..
T Consensus 433 ~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 433 SHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred CHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 0 1258999997 89999999999998855
No 326
>PLN02880 tyrosine decarboxylase
Probab=99.71 E-value=5.4e-14 Score=147.59 Aligned_cols=329 Identities=12% Similarity=0.078 Sum_probs=208.3
Q ss_pred ccCCCcccHHHHHHHHHHHHhhcCCCCCC-----CCEEEcCChHHHHHHHHHHhcc----C------CCCeEEEcCCcCc
Q 009517 162 AYSHSQGIKGLRDTIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIR----S------ENDGILCPIPQYP 226 (533)
Q Consensus 162 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~----~------~gd~Vlv~~p~~~ 226 (533)
.|....+..++.+.+.+|+.+.+|.+-.. ..-++|+|+++++..++.+.+. . +.-.|++++-+|.
T Consensus 113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~ 192 (490)
T PLN02880 113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS 192 (490)
T ss_pred ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence 34444557899999999999988854221 2357889999998888877641 0 1124667888899
Q ss_pred chHHHHHHhCCe---EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 227 LYSASIALHGGT---LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 227 ~~~~~~~~~g~~---~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
....++..+|.. ++.||++..+++.+|++.|+++|++....|..+-+|+.+-...+||.+-+ +++|+++|++||
T Consensus 193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~ 269 (490)
T PLN02880 193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG 269 (490)
T ss_pred HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence 999999999984 78899986667899999999999987666656666666677889999988 999999999999
Q ss_pred CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH-HHHHHHHhhh-
Q 009517 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE-VREQIYKVAS- 381 (533)
Q Consensus 304 ~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~-~~~~l~~~~~- 381 (533)
+|+++|.+|.++.... ..+.....++. ..| -+..+++|.+. ....+|++... +.. +...+..-..
T Consensus 270 iwlHVDaA~gg~~~~~----~~~~~~l~gie--~aD---Sit~d~HKwl~--~P~~~g~llvr--~~~~l~~~~~~~~~Y 336 (490)
T PLN02880 270 MWFHVDAAYAGSACIC----PEYRHYIDGVE--EAD---SFNMNAHKWFL--TNFDCSLLWVK--DRNALIQSLSTNPEF 336 (490)
T ss_pred CEEEEehhhHHHHHhC----HHHHHHhcCch--hcC---EEEECchhhcC--CCccEEEEEEe--CHHHHHHHHccCHHH
Confidence 9999999998864321 11112222221 123 44778999873 46778888772 322 2222211000
Q ss_pred --c-------cc--------cCC---hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 382 --V-------NL--------CSN---ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 382 --~-------~~--------~~~---~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
. +. ++. .+...+....+ -.+.+.++.++..+.++++.+.|++.+++++
T Consensus 337 l~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~------------G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el 404 (490)
T PLN02880 337 LKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLY------------GVENLQSYIRNHIKLAKEFEQLVAQDSRFEV 404 (490)
T ss_pred hcCccccccCCCChhccCcCCCCcccHHHHHHHHHHh------------CHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 0 00 000 01111111111 0123344444455788889999988888887
Q ss_pred ecC-CceeEEecccCCC---HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---CCcCcHH
Q 009517 442 NKA-EGAMYLFPRIQLP---EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL---PQEDKIP 514 (533)
Q Consensus 442 ~~~-~gg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~---~~~e~i~ 514 (533)
+.+ ..++.+| ++..+ ....+. -...+.+++.++..+++.+... .|..++|+++. .++++++
T Consensus 405 ~~~~~~~iv~F-r~~~~~~~~~~~~~-------~n~~l~~~l~~~g~~~v~~t~~----~g~~~lR~~~~n~~tt~~di~ 472 (490)
T PLN02880 405 VTPRIFSLVCF-RLVPPKNNEDNGNK-------LNHDLLDAVNSSGKIFISHTVL----SGKYVLRFAVGAPLTEERHVT 472 (490)
T ss_pred ecCCceEEEEE-EEeCCCCChhhHHH-------HHHHHHHHHHhCCCEEEEEEEE----CCEEEEEEEecCCCCCHHHHH
Confidence 665 5444433 23211 000000 0122344555555666665221 34559999995 4568999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009517 515 AIVTRLTDFHKNFMDK 530 (533)
Q Consensus 515 ~~~~~l~~~l~~~~~~ 530 (533)
.+++.|.++.+++..+
T Consensus 473 ~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 473 AAWKVLQDEASKLLGK 488 (490)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999988887654
No 327
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.71 E-value=1.7e-15 Score=153.87 Aligned_cols=314 Identities=13% Similarity=0.140 Sum_probs=194.4
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCCC-------cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCC-hHHHHHHHHH
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSHS-------QGIKGLRDTIAAGIEARDGFPADPNDIFLTDG-ASPAVHMMMQ 208 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~-------~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G-~~~al~~~~~ 208 (533)
|...|+.|++++.+.+.+..+.+...|... .-+.+.|+.++++++ . -++++|++|+| +|++++.++.
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~----~-~~~~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN----I-PDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC----C-CCCceEEEEcCCchHHHHHHHH
Confidence 444589999999888753211112223222 224566777777664 2 14578999988 9999999999
Q ss_pred HhccC---CCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCC-HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 209 LLIRS---ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLE-TSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 209 ~l~~~---~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld-~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
.+. . +|+.|++ .+.......+++..|.++..++.++..+++ + ++..+..+++ ++++|.+++..|.||
T Consensus 82 ~l~-~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~------~~~lV~~~h~~t~tG 152 (355)
T cd00611 82 NLL-GDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAP------DAAYVHYCSNETIHG 152 (355)
T ss_pred hcC-CCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCC------CCCEEEEeCCccccc
Confidence 997 4 4444443 232233344678889999988876432231 2 2222233333 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
+.++ ++++.||+++++|.+++- |..+ .++.. + + +.+.|-.|.+ |++|+ |.++
T Consensus 153 ~~~~--------~i~~~~g~~~~VDa~qs~----g~~~-idv~~----~-----~---~~~ss~~K~l-GP~G~--g~l~ 204 (355)
T cd00611 153 VEFD--------EVPDTGGVPLVADMSSNI----LSRP-IDVSK----F-----G---VIYAGAQKNL-GPAGV--TVVI 204 (355)
T ss_pred EEcc--------eecccCCCeEEEEccccc----cCCC-CCHHH----h-----C---EEEeeccccc-CCCce--EEEE
Confidence 9743 344559999999999985 3222 22222 1 2 3566679987 77774 6666
Q ss_pred EecCCHHHHHHHHHh-----------hh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHH
Q 009517 365 VTGFSAEVREQIYKV-----------AS--VNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTL 429 (533)
Q Consensus 365 ~~~~~~~~~~~l~~~-----------~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 429 (533)
+ ++++++++... .. ...++|..+.+++.++|+ ...+ .++.+.++.++..+++
T Consensus 205 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~----------~l~~~gg~e~i~~~~~~l~~~l 271 (355)
T cd00611 205 V---RKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLK----------WLKEQGGVEAMEKRNRQKAQLL 271 (355)
T ss_pred E---CHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHH----------HHHHcCCHHHHHHHHHHHHHHH
Confidence 6 77777665431 11 124556666677766663 1122 2677888899999999
Q ss_pred HHHHhcCCCce-Ee-cC--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEE
Q 009517 430 EDAFNSLEGIT-CN-KA--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCT 505 (533)
Q Consensus 430 ~~~L~~~~g~~-~~-~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis 505 (533)
++.|+++||+. .. .+ ..+..+.+.++ . ......+ ...+.+.|+.+.+|.. .. +.||+|
T Consensus 272 ~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~--~----------~~l~~~~-~~~~~r~G~~~~~~~~---~~--g~vR~S 333 (355)
T cd00611 272 YDTIDNSNGFYRGPVDKRARSRMNVPFRLG--K----------EELEKEF-LKEAEAAGMIGLKGHR---SV--GGIRAS 333 (355)
T ss_pred HHHHHhCccccccCCCHHHcCceEEEEEcC--C----------hhhhHHH-HHHHHHCCCcccCCCc---cc--CeEEEE
Confidence 99999998862 21 11 22221221122 1 0001222 1345678998666543 12 389999
Q ss_pred ec--CCcCcHHHHHHHHHHH
Q 009517 506 IL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 506 ~~--~~~e~i~~~~~~l~~~ 523 (533)
+. ++++||+++++.|+++
T Consensus 334 ~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 334 IYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ccCCCCHHHHHHHHHHHHHH
Confidence 96 7999999999988874
No 328
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.71 E-value=8.6e-15 Score=135.21 Aligned_cols=322 Identities=14% Similarity=0.114 Sum_probs=201.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccH----HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIK----GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~----~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
+|+++++..+++++... ....-.-.-|.. .|...||++.+ .|+.++.+.+-.|...++.++. .|.|
T Consensus 83 hPeii~a~~~aleeyGa-GlssvrfIcGtq~iHk~LE~kiAqfh~--------rED~ilypscfdANag~feail-~ped 152 (417)
T KOG1359|consen 83 HPEIINAGQKALEEYGA-GLSSVRFICGTQDIHKLLESKIAQFHG--------REDTILYPSCFDANAGAFEAIL-TPED 152 (417)
T ss_pred ChHHHHHHHHHHHHhCC-CccceeEEecchHHHHHHHHHHHHHhC--------CCceEEeccccccchHHHHHhc-Chhh
Confidence 68999999998887432 222222233444 45555555543 5677777888888888888888 7888
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
.|.-..-.+....+..+++. .+ -.+|+-.++..+.++.+. +-++|+....-...|-+.| +++|.
T Consensus 153 AvfSDeLNhASIIdGirLck------ry-----~h~dv~~l~~~l~~a~k~--r~klv~TDg~FSMDGdiaP---l~ei~ 216 (417)
T KOG1359|consen 153 AVFSDELNHASIIDGIRLCK------RY-----RHVDVFDLEHCLISACKM--RLKLVVTDGVFSMDGDIAP---LEEIS 216 (417)
T ss_pred hhhccccccchhhhhhHHHh------hh-----ccchhHHHHHHHHHhhhh--eEEEEEecceeccCCCccc---HHHHH
Confidence 88888888877777666654 11 146777788776653211 4566655566788899988 99999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
+++++||.++++||++..+.++.... ...+. .+...+ ..|+..+++|++ | |.-.||..+ |+.+++.+
T Consensus 217 ~La~kYgaLlfiDecHaTgf~G~tGr--Gt~E~----~~vm~~-vdiinsTLgKAl-G--ga~GGyttg---p~~li~ll 283 (417)
T KOG1359|consen 217 QLAKKYGALLFIDECHATGFFGETGR--GTAEE----FGVMGD-VDIINSTLGKAL-G--GASGGYTTG---PKPLISLL 283 (417)
T ss_pred HHHHhcCcEEEEeecccceeecCCCC--ChHHH----hCCCCc-ceehhhhhhhhh-c--CCCCCCccC---ChhHHHHH
Confidence 99999999999999998877743211 11121 111123 237789999998 4 677799988 99999888
Q ss_pred HHhhhcc--ccCChHH-HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 377 YKVASVN--LCSNISG-QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 377 ~~~~~~~--~~~~~~~-q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
+.-...+ ++.-+++ .-.+..++. .. -.-.....+.+.+.+.+++.++.- |+.+....--+.-..
T Consensus 284 rqr~RpylFSnslppavV~~a~ka~d----------ll-m~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~hPI~pv~- 350 (417)
T KOG1359|consen 284 RQRSRPYLFSNSLPPAVVGMAAKAYD----------LL-MVSSKEIQSRQANTQRFREFMEAA-GFTISGASHPICPVM- 350 (417)
T ss_pred HhcCCceeecCCCChhhhhhhHHHHH----------HH-HhhHHHHHHHHHHHHHHHHHHHhc-CceecCCCCCcccee-
Confidence 7654322 2221211 111122211 11 111334445566666777776655 877654221111110
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+. ... ....+..++| +.||+|..-+..-.++|...||+.++ +++|+|+++++++.++.+.+
T Consensus 351 lG-da~-----------lA~~~ad~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 351 LG-DAR-----------LASKMADELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred cc-cHH-----------HHHHHHHHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 11 000 1233455666 47999985444344667777888884 89999999999999887654
No 329
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.71 E-value=2e-14 Score=148.08 Aligned_cols=341 Identities=10% Similarity=0.002 Sum_probs=210.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHhcc------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR------ 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~~------ 212 (533)
.+++.+.+...+..... .... .....++.+.+.+++.+.+|.+...+++.. |+|++|++..++..+..
T Consensus 54 ~p~~~~~~~~~l~~~~~-np~s---~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 54 EPEARKLMDETINKNMI-DKDE---YPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CHHHHHHHHHHHhcCCC-Cccc---CccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 46677777777764322 1222 222347777777777777774311145544 89999999998866531
Q ss_pred -CCC-----CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 213 -SEN-----DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 213 -~~g-----d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
..| ..|+++.-.|..+..+++..|.++..+|+++ +++.+|++.|+++|++ ++.+|+++..+|.||.+
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~i 202 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEY 202 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCccc
Confidence 011 3688999999999999999999999999986 3467999999999987 78889999999999999
Q ss_pred CCHHHHHHHHHHHHHc------CCEEEEccccccccc---cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 287 LAEENQRAIVDFCKKE------GLVLLADEVYQENVY---VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~------~~~lI~De~y~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
.| +++|+++|+++ |+++++|.+|.++.. .+..+ ..+ . ..... -+..|.+|.+.|+.
T Consensus 203 dp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~-~~~----~-----~~~~D-Sis~s~HK~~~~P~- 267 (431)
T TIGR01788 203 ED---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE-WDF----R-----LPRVK-SINVSGHKYGLVYP- 267 (431)
T ss_pred CC---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch-hhc----C-----CCCce-EEEECchhccCCCC-
Confidence 98 99999999999 999999999997442 12111 111 0 11222 34668899653444
Q ss_pred CeeEEEEEecCCHH-HHHHHHHh---h-----hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 009517 358 KRGGYMEVTGFSAE-VREQIYKV---A-----SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428 (533)
Q Consensus 358 ~riG~v~~~~~~~~-~~~~l~~~---~-----~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (533)
.+|++.+ .+++ +...+... . ..+...+..+..++..++. ....-..-++++.++..+..++
T Consensus 268 -g~G~l~~--r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~-------l~~lG~~G~~~i~~~~~~la~~ 337 (431)
T TIGR01788 268 -GVGWVIW--RDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN-------FLRLGREGYRKIMQNSLDVARY 337 (431)
T ss_pred -CcEEEEE--eChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHH-------HHHhcHHHHHHHHHHHHHHHHH
Confidence 4677776 2333 22222110 0 0011112221111111111 0000113356677778888899
Q ss_pred HHHHHhcCCCceEecC--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 429 LEDAFNSLEGITCNKA--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 429 l~~~L~~~~g~~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
+.+.|++.++++++.+ ..++..| ++..... .+. +..+ +.+.|.++|+.+..-..-..-.|..++|+++
T Consensus 338 l~~~L~~~~~~el~~~~~~~~iV~F-r~~~~~~-------~~~-~~~~-l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~ 407 (431)
T TIGR01788 338 LAEEIAKLGPFEIISDGSGIPLVAF-KLKDDAD-------PGY-TLYD-LSHRLRERGWIVPAYTLPKNAEDIVVMRIVV 407 (431)
T ss_pred HHHHHHhCCCEEEeeCCCCceEEEE-EeCCCCC-------CCc-CHHH-HHHHHHHCCCcccCCCCCCccCCeEEEEEEe
Confidence 9999999988988764 5555544 2221000 001 1222 3456677898653211111012344789998
Q ss_pred c--CCcCcHHHHHHHHHHHHHHH
Q 009517 507 L--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
. .+.+.++++++.|++++..+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 408 REGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred cCCCCHHHHHHHHHHHHHHHHhh
Confidence 4 67788999999999887654
No 330
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.70 E-value=3.9e-14 Score=143.60 Aligned_cols=325 Identities=15% Similarity=0.176 Sum_probs=206.6
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH-HHHhCCeE
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGGTL 239 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~-~~~~g~~~ 239 (533)
..|.....+.+|.++++++++ .+.++.+++|+.|+.+++...+ ++||+| +..+|..-... +...|+..
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG--------~e~aV~v~sGTaAl~ll~~l~v-~pGd~V--p~n~~f~Tt~ahI~~~Ga~f 140 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYG--------FKHVVPTHQGRGAENLLSRIAI-KPGQYV--PGNMYFTTTRYHQELNGGIF 140 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHC--------CCeEEEeCCHHHHHHHHHHhCC-CCcCEE--CCccchHhhHHHHHhCCcEE
Confidence 458877779999999999975 4569999999999998766666 789965 55545444433 67778865
Q ss_pred EEEecC--------CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 240 VPYYLD--------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 240 ~~v~~~--------~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt-G~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+.+..+ ...++.+|++.|+++|++.. .++++.|.+.+++|-. |...|.+++++|.++|++||+.||+|.
T Consensus 141 vDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~Da 218 (460)
T PRK13237 141 VDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDA 218 (460)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEEC
Confidence 555322 22367899999999998631 1255667778888877 799999999999999999999999999
Q ss_pred cccc----ccc--cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh---
Q 009517 311 VYQE----NVY--VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--- 381 (533)
Q Consensus 311 ~y~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--- 381 (533)
+... |+- .++-...++..+..+++. ..| ++..|++|.+ +. +. .|+++. .++++.++++.+.-
T Consensus 219 Ara~gna~fI~~re~~y~~~~i~ei~~e~~s-~aD---~~t~S~~K~~-~~-~~-GG~i~t--~D~eL~~~~r~~~~~~e 289 (460)
T PRK13237 219 TRCVENAYFIKEREEGYQDKSIKEIVHEMFS-YAD---GCTMSGKKDC-LV-NI-GGFLAM--NDEELFDEAKELVVVYE 289 (460)
T ss_pred cchhcChhhhcccccccCCCcHhHHhhhccC-cCc---EEEEeCCCCC-CC-CC-ceEEEE--CCHHHHHHHHHhccccC
Confidence 8752 110 011122344455555532 234 5577899987 32 22 477776 48889888877631
Q ss_pred --ccccC-ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccC--C
Q 009517 382 --VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQ--L 456 (533)
Q Consensus 382 --~~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~--~ 456 (533)
.+++. +.--..+++..|.. +.++ ...+.-.+..++|.+.|.+. |+.++.|.||.-+|++.. +
T Consensus 290 G~~tygg~~grd~~alAvgl~E----------~~~~--~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~l 356 (460)
T PRK13237 290 GMPSYGGMAGRDMEAMAIGIEE----------SVQY--EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFL 356 (460)
T ss_pred CCcCCCChhhhHHHHHHhHHHh----------hchH--HHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhC
Confidence 12221 11112222222321 1111 22222234557888999887 999999999988887543 1
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEE-cCCC-CCCC--CC------CceEEEEec---CCcCcHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLV-PGSG-FGQV--PG------TWHFRCTIL---PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~-pg~~-f~~~--~g------~~~iRis~~---~~~e~i~~~~~~l~~~ 523 (533)
|.- ..... ....++..+..+.||--. -|+. ++.. .+ -..+|+++. -|.+.++..+++|..+
T Consensus 357 ph~-----~~~~~-p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 430 (460)
T PRK13237 357 PHL-----PQDQF-PAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKL 430 (460)
T ss_pred CCC-----CcccC-hHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHH
Confidence 110 00011 233445566777887543 2222 2211 11 137999993 6778899999999887
Q ss_pred HHH
Q 009517 524 HKN 526 (533)
Q Consensus 524 l~~ 526 (533)
.++
T Consensus 431 ~~~ 433 (460)
T PRK13237 431 YKH 433 (460)
T ss_pred HHh
Confidence 765
No 331
>PLN02590 probable tyrosine decarboxylase
Probab=99.70 E-value=1.5e-13 Score=144.29 Aligned_cols=349 Identities=11% Similarity=0.067 Sum_probs=217.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCC-----CCCEEEcCChHHHHHHHHHHhccC--
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIRS-- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~~-- 213 (533)
|..++..+.....+. ....|....+..++.+.+.+|+.+.+|.+-. ...=++++|+++++..++.+.+..
T Consensus 143 ~~~~lgd~l~sa~n~---~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~ 219 (539)
T PLN02590 143 VAGFLGEMLNAGLSV---VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRIL 219 (539)
T ss_pred HHHHHHHHHHHhccc---ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHH
Confidence 445555444333321 2344555666889999999999999885532 123577899999998887776410
Q ss_pred --------CCCeEEEcCCcCcchHHHHHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC
Q 009517 214 --------ENDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (533)
Q Consensus 214 --------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP 282 (533)
+.-.|++++.+|.....++..+|. .++.||++..+++.+|++.|+++|++....|..+-+|+.+-....
T Consensus 220 ~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~ 299 (539)
T PLN02590 220 KKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTS 299 (539)
T ss_pred hhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 112566778889999999999998 588999986667899999999999887666656666666677888
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE
Q 009517 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (533)
Q Consensus 283 tG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~ 362 (533)
||.+=+ +++|+++|++||+|+.+|.+|.++..-. .....+...+. ..| -| ...++|.+. ..+.+|.
T Consensus 300 tGaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~----~~~r~~~~Gie--~AD--Si-t~D~HK~l~--~p~~cg~ 365 (539)
T PLN02590 300 SAAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACIC----PEYRKFIDGIE--NAD--SF-NMNAHKWLF--ANQTCSP 365 (539)
T ss_pred CcccCC---HHHHHHHHHHhCCeEEEecchhhhhhcC----hhhHHHhcCCc--cCC--EE-EECchhhcC--cCcCEEE
Confidence 999866 9999999999999999999999865321 12223333331 122 23 568899773 5678888
Q ss_pred EEEecCCH-HHHHHHHH---hhh---------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHH
Q 009517 363 MEVTGFSA-EVREQIYK---VAS---------------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (533)
Q Consensus 363 v~~~~~~~-~~~~~l~~---~~~---------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (533)
+.+ .++ .+.+.+.. +.. ...++-.+ .++..++. ....-.+-++++.++..
T Consensus 366 llv--r~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~--raLklW~~-------lr~~G~~G~~~~i~~~~ 434 (539)
T PLN02590 366 LWV--KDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRF--RSLKLWMV-------LRLYGSENLRNFIRDHV 434 (539)
T ss_pred EEe--cCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCch--HHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 776 233 23333211 000 00011111 11211110 00011234566777778
Q ss_pred HHHHHHHHHHhcCCCceEecC-CceeEEecccCCCH---HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCC
Q 009517 424 RRAKTLEDAFNSLEGITCNKA-EGAMYLFPRIQLPE---KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGT 499 (533)
Q Consensus 424 ~~~~~l~~~L~~~~g~~~~~~-~gg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~ 499 (533)
+..+++.+.|++.|+++++.+ +-+..+| ++..+. ...+. ....+.+++.+.-.+++.+.. -.|.
T Consensus 435 ~lA~~~~~~l~~~~~fel~~~~~l~iVcF-r~~~~~~~~~~~~~-------ln~~l~~~l~~~G~~~vs~t~----~~g~ 502 (539)
T PLN02590 435 NLAKHFEDYVAQDPSFEVVTTRYFSLVCF-RLAPVDGDEDQCNE-------RNRELLAAVNSTGKIFISHTA----LSGK 502 (539)
T ss_pred HHHHHHHHHHhcCCCeEEecCCceEEEEE-EecCCCCCHHHHHH-------HHHHHHHHHHhCCCEEEEeeE----ECCE
Confidence 888899999998888987665 3333332 232110 00000 012333344433344455422 2344
Q ss_pred ceEEEEec---CCcCcHHHHHHHHHHHHHHHHH
Q 009517 500 WHFRCTIL---PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 500 ~~iRis~~---~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.++|+++. .++++|+.+++.|.+..+++.+
T Consensus 503 ~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 503 FVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 58999994 6778899999999988776643
No 332
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.69 E-value=1.9e-14 Score=131.57 Aligned_cols=306 Identities=15% Similarity=0.195 Sum_probs=206.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 248 (533)
+..+.+.+++|++ .|.+-+|+|+.++-..++.+++ ++||.|++....+....-+++.+|.++..+|-...+
T Consensus 63 I~~F~~dlaeFlg--------~D~~R~t~GARe~KfavMhal~-~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~P 133 (382)
T COG1103 63 IKDFLEDLAEFLG--------MDEVRVTAGAREAKFAVMHALC-KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYP 133 (382)
T ss_pred HHHHHHHHHHHhC--------CceeeecccchhhHHHHHHHhc-cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCC
Confidence 6778888999975 6789999999999999999999 899999999988777667889999999999977778
Q ss_pred CCCCCHHHHHHHHHHHHhcC-CCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHH
Q 009517 249 GWGLETSEVKKQLEAAKAKG-ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g-~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~ 327 (533)
.|.++++...+.|.+..+.+ .++.+.++++|...-|...+ -++++++|+++++.++...+|+-... ..+.
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~Grm-----pvs~- 204 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTVGRM-----PVSG- 204 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceeeccc-----cccc-
Confidence 89999999999998875544 56888888999877888766 89999999999999999999986222 2222
Q ss_pred HHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhc--------cccCChHHHHHHHHHcC
Q 009517 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV--------NLCSNISGQILASLVMS 399 (533)
Q Consensus 328 ~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~--------~~~~~~~~q~a~~~~L~ 399 (533)
.+. ..| ++++|=+|+++ +.-++|.+.. ..++.+.+-+.... -.+...-+.-++.. +
T Consensus 205 ---ke~---g~D---FiVgSGHKsmA--As~PiGvl~~---~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTl-m- 268 (382)
T COG1103 205 ---KEI---GAD---FIVGSGHKSMA--ASAPIGVLAM---SEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTL-M- 268 (382)
T ss_pred ---ccc---CCC---EEEecCccchh--ccCCeeEEee---hhHHHHHHHhhcccccccceeeeecccccCchHHHH-H-
Confidence 222 345 77899999994 4669999887 78877766443210 01111222111111 1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe--cCCceeEEecccCCCHHHHHHHHhcCCCChHHHHH
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN--KAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCR 477 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (533)
++|....+.+++.-++.+ +..++.+.|+++.|+.-. +|..-=.++ +..|.- ..-+++. ...-.|+.
T Consensus 269 ------ASfP~V~eRVkrWdeEv~-kaR~fv~elEkigg~~qlG~rPk~HdLm~--Fetp~f-~eIakk~--~r~gyFlY 336 (382)
T COG1103 269 ------ASFPHVVERVKRWDEEVE-KARWFVAELEKIGGVKQLGERPKNHDLMK--FETPVF-HEIAKKH--KRKGYFLY 336 (382)
T ss_pred ------hcCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHhCCCCcccceee--ecCchH-HHHHHhC--cCCceeeH
Confidence 123233333333333333 344677888887444422 232211111 233321 1111111 11223445
Q ss_pred HHHHccceE-EEcCCCCCCCCCCceEEEEe-cCCcCcHHHHHHHHHHHHHHH
Q 009517 478 RLLNATGIV-LVPGSGFGQVPGTWHFRCTI-LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 478 ~ll~~~gV~-v~pg~~f~~~~g~~~iRis~-~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+-|+++||. +.||. ..+|.+|. +++.|+++..+++++++++++
T Consensus 337 ~ELK~RgI~GI~~G~-------Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 337 EELKKRGIHGIQPGQ-------TKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred HHHHhcCccccccCc-------eeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 678888885 44432 23899998 599999999999999988764
No 333
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.69 E-value=7.2e-15 Score=149.01 Aligned_cols=320 Identities=15% Similarity=0.123 Sum_probs=199.4
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCCC---cccHHHHHHHHHHHHhhcCCCCCCCCEEEc-CChHHHHHHHHHHhcc
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSHS---QGIKGLRDTIAAGIEARDGFPADPNDIFLT-DGASPAVHMMMQLLIR 212 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~---~G~~~lr~aia~~~~~~~g~~~~~~~i~~t-~G~~~al~~~~~~l~~ 212 (533)
|...|+.|++++.+.+.+....+...+... .-..++.+.+.+.+.+.++.+ +..+|+++ .+++.+++.++..++
T Consensus 11 P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~- 88 (360)
T PRK05355 11 PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLL- 88 (360)
T ss_pred CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcC-
Confidence 444589999999888743211111222111 112355555555555555531 22356555 667888999999998
Q ss_pred CCCCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHH-HHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 213 SENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKK-QLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~-~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
.+|+++++..-+..+ +..+++.+|.. ..+..++..++ .+..++++ .+++ ++++|.+++-.|.||+..+
T Consensus 89 ~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~------~~~~V~~th~eTstGv~~~- 159 (360)
T PRK05355 89 GGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSD------DAAYVHYTSNETIDGTEFH- 159 (360)
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCC------CCCEEEEccCCCcceEecC-
Confidence 788888877766554 35577778865 55555432232 23333333 5654 6899999999999999984
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
.+.+| +|+++|+|.+.+- |..+ .++. ++ + +++.|-.|.+ |++|+ |++.+ +
T Consensus 160 -~i~~i------~g~l~vVDavss~----g~~~-idv~----~~-----d---~~~~ssqK~l-gP~Gl--g~l~~---s 209 (360)
T PRK05355 160 -ELPDT------GDVPLVADMSSDI----LSRP-IDVS----KF-----G---LIYAGAQKNI-GPAGL--TIVIV---R 209 (360)
T ss_pred -ccccc------CCCcEEEEcCccc----cCcc-CCHH----Hc-----c---EEEEeccccc-cCCce--EEEEE---C
Confidence 25555 8999999999975 3222 2221 11 2 6788889998 77775 55655 7
Q ss_pred HHHHHHHHH-h----------h--hccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Q 009517 370 AEVREQIYK-V----------A--SVNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 370 ~~~~~~l~~-~----------~--~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++++.+.+ . . ...+++|....+++.++|+. ..+ .++.+.++.++..+++++.|+
T Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~----------i~~~gG~e~i~~r~~~l~~~l~~~l~ 279 (360)
T PRK05355 210 EDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKW----------LKEQGGVAAMEKRNQEKAALLYDAID 279 (360)
T ss_pred HHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHH----------HHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 777766544 1 1 12356677777777777741 122 267788889999999999999
Q ss_pred cCCCceEecC---Cc-eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--C
Q 009517 435 SLEGITCNKA---EG-AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--P 508 (533)
Q Consensus 435 ~~~g~~~~~~---~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~ 508 (533)
+++.+....+ .. .... +..|... ....+ ...+.++|+.+.+|.. .. +.||+|+. +
T Consensus 280 ~~~~~~~~~~~~~rs~~v~s---f~~~~~~----------~~~~~-~~~~~~~Gi~~~~~~~---~~--g~vRiS~~~~n 340 (360)
T PRK05355 280 SSDFYRNPVAPEDRSRMNVP---FTLADEE----------LDKKF-LAEAKAAGLVGLKGHR---SV--GGMRASIYNAM 340 (360)
T ss_pred hCCCcccCCChhhcCCcEEE---EEcCChH----------HHHHH-HHHHHHCCCcccCCCC---cc--CcEEEECCCCC
Confidence 9842222111 12 2222 2233221 11222 2345678999876653 12 38999996 8
Q ss_pred CcCcHHHHHHHHHHHHHH
Q 009517 509 QEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 509 ~~e~i~~~~~~l~~~l~~ 526 (533)
+.++|+.+++.|++++++
T Consensus 341 t~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 341 PLEGVQALVDFMKEFERR 358 (360)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999987764
No 334
>PRK02769 histidine decarboxylase; Provisional
Probab=99.68 E-value=9.2e-14 Score=141.27 Aligned_cols=292 Identities=12% Similarity=0.012 Sum_probs=188.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHhcc-CCCCeEEEcCCcCcchHHHHHHhCCeEEEEecC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~~-~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~ 245 (533)
..++.+.+.+++.+.+| .+++++ ++|+|+||++..++...+. .++++|++++-.|.....+++..|.+...++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g--~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFK--IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhC--CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 44566666666666666 344444 8899999998877665531 367899999999999999999999998888886
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC---CEEEEccccccccccCCCC
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG---LVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~---~~lI~De~y~~~~~~~~~~ 322 (533)
+ ++.+|+++|+++|++. +.++.+|+++.++|+||.+-+ +++|+++|+++| +++++|.+|.++...-...
T Consensus 141 ~--~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~ 212 (380)
T PRK02769 141 P--NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNN 212 (380)
T ss_pred C--CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCc
Confidence 4 4579999999999873 335889999999999999988 899999999998 6999999998754310000
Q ss_pred cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh------hcc--ccCChHHHHHH
Q 009517 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA------SVN--LCSNISGQILA 394 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~------~~~--~~~~~~~q~a~ 394 (533)
...+ .+ ..+. ..+..|.+|.+ + .-..+|+++. .++....+.... ..+ .+.+.....++
T Consensus 213 ~~~~-d~-------~~~v-Dsis~s~HK~~-~-~P~g~G~l~~---r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~l 278 (380)
T PRK02769 213 PPPF-SF-------ADGI-DSIAISGHKFI-G-SPMPCGIVLA---KKKYVERISVDVDYIGSRDQTISGSRNGHTALLL 278 (380)
T ss_pred cccC-Cc-------cCCC-CEEEECCcccC-C-CCCCcEEEEE---ehhhhhhcccCccccCCCCCCccCCCCcHHHHHH
Confidence 0000 10 0111 24567889976 3 2255788877 555555442110 011 11222333333
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCceeEEecccCCCHHHHHHHHhcCCCChH
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-AEGAMYLFPRIQLPEKAIKAAEAEKTVPDA 473 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (533)
-.+|+.. -.+..+++.++..+..+++.+.|++. |+.... |.....+| +.|. +
T Consensus 279 w~aL~~l---------g~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f---~~~~-------------~- 331 (380)
T PRK02769 279 WAAIRSL---------GSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVF---PCPS-------------E- 331 (380)
T ss_pred HHHHHHH---------CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEE---cCCC-------------H-
Confidence 3333210 01235667778888888999999886 777554 55443333 3221 1
Q ss_pred HHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 474 FYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 474 ~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
.+. +|..+.+ ... ++||.+. ++.+.|+++++.|...+.
T Consensus 332 ----~~~--~~w~l~~------~~~--~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 332 ----RIW--KKWHLAT------SGN--QAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred ----HHH--hCeeEcc------cCC--EEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 112 3444443 112 6788885 677788888888877655
No 335
>PLN03032 serine decarboxylase; Provisional
Probab=99.68 E-value=7.7e-14 Score=140.80 Aligned_cols=272 Identities=11% Similarity=-0.002 Sum_probs=175.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHhcc-CCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR-SENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~~-~~gd~ 217 (533)
...+++++...+.+..+.....+.......++.+.+.+++.+.+| .+++++ ++|+|||+++..++...+. .++..
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~ 113 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGI 113 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcE
Confidence 345677777766543332222222222346777777777777667 556676 9999999999998887641 14568
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.-.|.....+++..|..+..+|++. +..+|+++|+++|++. ..++.+|+++..+|+||.+-+ +++|++
T Consensus 114 vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~---~~~~~lvv~tagtt~tG~idp---i~eI~~ 185 (374)
T PLN03032 114 LYASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKN---RDKPAILNVNIGTTVKGAVDD---LDRILR 185 (374)
T ss_pred EEeCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHc---CCCCEEEEEEecCcCCccCCC---HHHHHH
Confidence 99999999999999999999999999875 4489999999999862 114667778889999999977 889999
Q ss_pred HHHHcC-----CEEEEccccccccc--cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 298 FCKKEG-----LVLLADEVYQENVY--VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 298 l~~~~~-----~~lI~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+|+++| +++.+|.+|.++.. ....+...+ ..... -+..|.+|.+ | .-..+|.++. .+
T Consensus 186 i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~----------~~~vD-Sis~s~HK~~-g-~P~g~G~ll~---r~ 249 (374)
T PLN03032 186 ILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF----------RKPIG-SVSVSGHKFL-G-CPMPCGVALT---RK 249 (374)
T ss_pred HHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC----------CcCCc-EEEECccccc-C-CCcCeEEEEE---Ec
Confidence 999996 59999999977432 111111111 01112 3466889965 4 2356788887 55
Q ss_pred HHHHHHHHhh------hccccCCh-----HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 371 EVREQIYKVA------SVNLCSNI-----SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 371 ~~~~~l~~~~------~~~~~~~~-----~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
+.++.+..-. ..+...+. +...+....+ -.+...++.++..++.+++.+.|++. ++
T Consensus 250 ~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~------------G~~g~~~~~~~~~~~a~~l~~~l~~~-~~ 316 (374)
T PLN03032 250 KHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRK------------GYRGIKRDVQHCMRNAHYLKDRLTEA-GL 316 (374)
T ss_pred hhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHh------------CHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 5555443211 11222222 2222222222 12345667777788888999999887 66
Q ss_pred eE-ecCCceeEEe
Q 009517 440 TC-NKAEGAMYLF 451 (533)
Q Consensus 440 ~~-~~~~gg~~~~ 451 (533)
.. ..|.....+|
T Consensus 317 ~~~~~p~~~~V~f 329 (374)
T PLN03032 317 TCRLNELSSTVVF 329 (374)
T ss_pred cEEECCCceEEEE
Confidence 64 4566554443
No 336
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=3.9e-14 Score=145.06 Aligned_cols=316 Identities=14% Similarity=0.022 Sum_probs=192.7
Q ss_pred cCCCCHH-HHHHHHHHHhcCCCCCccccCC--CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHHHHHHHhcc
Q 009517 137 QGLFSAD-SIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVHMMMQLLIR 212 (533)
Q Consensus 137 ~~~~p~~-v~~~~~~~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~-G~~~al~~~~~~l~~ 212 (533)
|..+|+. |++++.+.+.. ..+..+ ..-+.+.|+.+++++ |.+ +.++|++++ +++.+++.++..++
T Consensus 20 p~~~~~~~v~~a~~~~~~~-----~~hr~~~f~~~~~~~r~~l~~l~----~~~-~~~~v~~~~gs~T~~~~~~~~~l~- 88 (378)
T PRK03080 20 PCKKRPGWQLEALADALLG-----RSHRQKPVKALLKRVIEGTRELL----SLP-EGYEVGIVPGSDTGAWEMALWSLL- 88 (378)
T ss_pred CcCCChHHHHHHHHhhhcc-----cCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEECCchHHHHHHHHHhcC-
Confidence 3444677 88887655432 111121 112345555566555 421 345788876 89999999999987
Q ss_pred CC-CCeEEEcCCcCcc-hHH-HHHHhCC-eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 213 SE-NDGILCPIPQYPL-YSA-SIALHGG-TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 213 ~~-gd~Vlv~~p~~~~-~~~-~~~~~g~-~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
.+ ++.|+. .-.|+. +.. +.+..|. ++..++.+. +..+|+++++ .++.|.+++..|.||+..+
T Consensus 89 ~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~--g~~~d~~~i~-----------~~~~V~~~h~~t~tG~~~p 154 (378)
T PRK03080 89 GARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY--GSLPDLSAVD-----------FDRDVVFTWNGTTTGVRVP 154 (378)
T ss_pred CCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC--CCCCCHhhcC-----------CCCCEEEEecCCccceecc
Confidence 54 444444 444444 222 2255788 888887653 3356776632 2456888999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|++ +++|+++|+|.+++- |..+ .++.. + | +++.|..|+|.|++| +|++.+
T Consensus 155 ---i~~I~~--~~~g~~~vVDa~qs~----G~~p-idv~~----i-----D---~~~~s~~K~l~~P~G--~g~l~v--- 207 (378)
T PRK03080 155 ---VARWIG--ADREGLTICDATSAA----FALP-LDWSK----L-----D---VYTFSWQKVLGGEGG--HGMAIL--- 207 (378)
T ss_pred ---chhhcc--ccCCCeEEEeccccc----ccCC-CCHHH----C-----c---EEEEehhhhCCCCCc--eEEEEE---
Confidence 777777 788999999999875 3222 22211 1 3 778888999855556 566666
Q ss_pred CHHHHHHHHHhh-----------------------hcc-ccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHH
Q 009517 369 SAEVREQIYKVA-----------------------SVN-LCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSL 422 (533)
Q Consensus 369 ~~~~~~~l~~~~-----------------------~~~-~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~ 422 (533)
+++.++++.... ..+ ..++..+..++..+|+ ...+ -++.+.++.
T Consensus 208 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~----------~l~~~gG~e~i~~r~ 277 (378)
T PRK03080 208 SPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLD----------WANSIGGLDALIART 277 (378)
T ss_pred CHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHH----------HHHHcCCHHHHHHHH
Confidence 888877765321 001 1233333333344442 1222 256777888
Q ss_pred HHHHHHHHHHHhcCCCceEecC----Cc-eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 423 ARRAKTLEDAFNSLEGITCNKA----EG-AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 423 ~~~~~~l~~~L~~~~g~~~~~~----~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
+++.+++++.|++++++.+..+ .+ ++..+ ..|.... ..+..++..++ ++|+.+..|.. ..
T Consensus 278 ~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~---~~~~~~~--------~~~~~~~~~l~-~~~i~v~~g~~-~~-- 342 (378)
T PRK03080 278 AANASVLYDWAEKTPWATPLVADPATRSNTSVTL---DFVDAQA--------AVDAAAVAKLL-RENGAVDIEPY-RD-- 342 (378)
T ss_pred HHHHHHHHHHHHhCCCcccccCCccccCccEEEE---EcCCchH--------HHHHHHHHHHH-HcCCeeccccc-cC--
Confidence 8889999999998865655421 12 23332 2222000 00223344555 45888887643 21
Q ss_pred CCceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 498 g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
..+.||+|+. +++++|+.+++.|++++++.+.
T Consensus 343 ~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 343 APNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 1248999996 8899999999999998887654
No 337
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.66 E-value=1.7e-13 Score=127.98 Aligned_cols=312 Identities=13% Similarity=0.101 Sum_probs=202.2
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcc-hHHHHHHhCC
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPL-YSASIALHGG 237 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~-~~~~~~~~g~ 237 (533)
..+|..++ ...+.+.+-+-+...|.. .++.-.++...++.+++.++-.++ .|||.|++.. ..|.. +.++.+..|+
T Consensus 40 ~lgh~sPe-~~qIm~~v~egikyVFkT-~n~~tf~isgsGh~g~E~al~N~l-ePgd~vLv~~~G~wg~ra~D~~~r~ga 116 (385)
T KOG2862|consen 40 SLGHMSPE-FVQIMDEVLEGIKYVFKT-ANAQTFVISGSGHSGWEAALVNLL-EPGDNVLVVSTGTWGQRAADCARRYGA 116 (385)
T ss_pred ccccCCHH-HHHHHHHHHHHHHHHhcc-CCCceEEEecCCcchHHHHHHhhc-CCCCeEEEEEechHHHHHHHHHHhhCc
Confidence 34555443 444444444433333321 122334555556789999999998 7999988766 44543 5678899999
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 009517 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 238 ~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~ 317 (533)
++..++.+... .+.++.+.+++..+ ++++|++++-..-||+.-+ -+..+-++|++|+.++++|.+-+-
T Consensus 117 ~V~~v~~~~G~--~~~le~i~~~lsqh-----~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaSl--- 184 (385)
T KOG2862|consen 117 EVDVVEADIGQ--AVPLEEITEKLSQH-----KPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVASL--- 184 (385)
T ss_pred eeeEEecCccc--CccHHHHHHHHHhc-----CCceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhhc---
Confidence 99999877644 78999999999997 8999999999999999865 355667799999999999998874
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh----------------
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS---------------- 381 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~---------------- 381 (533)
|..++. +.+ ..+. +....-.|++++++|+-+ +.. ++...++++..++
T Consensus 185 -ggt~F~-----mDe-----wgVD-vaytgSQKaL~aP~GLsi--isf---S~ka~~~~~~rK~~~~~~yFd~~~~~~~w 247 (385)
T KOG2862|consen 185 -GGTEFE-----MDE-----WGVD-VAYTGSQKALGAPAGLSI--ISF---SDKALEAIRDRKTKPVSFYFDILRLGNFW 247 (385)
T ss_pred -CCccce-----ehh-----hccc-EEEecchhhcCCCCCcce--eec---CHHHHHHHhhccCCceEEEEeHHhhcchh
Confidence 322211 111 2333 445555799988888766 443 7777777764321
Q ss_pred --------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec--CCceeEEe
Q 009517 382 --------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK--AEGAMYLF 451 (533)
Q Consensus 382 --------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~gg~~~~ 451 (533)
....++....+.+.++|.. -..+-+++..++.+++.++++..|+++ |++... .+--.-..
T Consensus 248 gc~~e~~~yhhT~pv~lly~Lr~AL~~---------I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptv 317 (385)
T KOG2862|consen 248 GCDGEPRAYHHTPPVQLLYSLRAALAL---------IAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTV 317 (385)
T ss_pred ccCCcccccccCCcHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcc
Confidence 0123344444555555431 123447778888899999999999998 765321 11111111
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---CCcCcHHHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL---PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~ 526 (533)
..+..|.+ . +..+.+.++...++|.+.-|-. +....+|||.+. .+.+.|+..++.|+.++.+
T Consensus 318 ttv~vp~g---------v-Dw~dVv~~~~~~~~vei~gglg---~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 318 TTVKVPYG---------V-DWKDVVAYAMSHYVVEIGGGLG---PTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eeeecCCC---------C-CHHHHHHHHHHhcCEEeccccC---CCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 12333432 1 3445566777766777765443 334449999982 5677888888888877754
No 338
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.66 E-value=4.5e-14 Score=156.46 Aligned_cols=319 Identities=14% Similarity=0.097 Sum_probs=208.7
Q ss_pred ccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH----HHHHHHHHHhccCCCC----eEEEcCCcCcch
Q 009517 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS----PAVHMMMQLLIRSEND----GILCPIPQYPLY 228 (533)
Q Consensus 160 ~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~----~al~~~~~~l~~~~gd----~Vlv~~p~~~~~ 228 (533)
.+-|.| .+|+.++...+.+++.+..| .+.|.++++++ +++.++++.+...+|| +|+++...|...
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn 629 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEITG----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTN 629 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccC
Confidence 455555 45766666666666665545 38999999988 8999999999733387 899999999988
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
...+...|.+++.++++++ ..+|+++|+++++++ ..++++|++++|+|-+|...+ +++|+++|+++|+++++
T Consensus 630 ~a~a~~~G~~vv~v~~d~~--G~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~v 701 (993)
T PLN02414 630 PASAAMCGMKIVVVGTDAK--GNINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYM 701 (993)
T ss_pred HHHHHHCCCEEEEeccCCC--CCcCHHHHHHHHhcc---CCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEE
Confidence 8888889999999999753 379999999999852 126899999999999999877 99999999999999999
Q ss_pred ccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC---CCeeEEEEEecCCHHHHHHHHHh------
Q 009517 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC---GKRGGYMEVTGFSAEVREQIYKV------ 379 (533)
Q Consensus 309 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~---G~riG~v~~~~~~~~~~~~l~~~------ 379 (533)
|.++..-.. +- ... .++ .-| +++.|..|+|.++. |-.+|++.+ .++++..+-.-
T Consensus 702 DgAq~~a~~-~l---~~p----~~~---GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~---~~~L~p~lPg~~v~~~~ 764 (993)
T PLN02414 702 DGANMNAQV-GL---TSP----GFI---GAD---VCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVPTG 764 (993)
T ss_pred EecCHHhcc-Cc---CCc----ccc---CCC---EEEecCCccCCcCcccCCCCeeeEEE---chhhcccCCCCccccCC
Confidence 999843111 10 110 111 234 77888999885333 244788876 66555443210
Q ss_pred ------hhccccC---ChHHHH----HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Q 009517 380 ------ASVNLCS---NISGQI----LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEG 446 (533)
Q Consensus 380 ------~~~~~~~---~~~~q~----a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g 446 (533)
.....+. .+.++. ++...+..- -.+.+++..+....+.+++.+.|.+..++.+..+.+
T Consensus 765 ~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l---------G~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~ 835 (993)
T PLN02414 765 GIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM---------GSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNG 835 (993)
T ss_pred CcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH---------CHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Confidence 0000111 122221 222222110 113355667777888899999997754555555444
Q ss_pred eeEE-e-cccC-CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 447 AMYL-F-PRIQ-LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 447 g~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
.++- | +++. ++. ..|. +...+.++|+ ++||...- ..|. ..+.+||++. .+.++|++++++|.
T Consensus 836 ~~~hEfv~~~~~l~~-------~~g~-~~~di~krL~-d~Gihapt-~~~p---v~~~lmiepTE~~skeelDrf~~al~ 902 (993)
T PLN02414 836 TCAHEFIIDLRPFKN-------TAGI-EPEDVAKRLM-DYGFHAPT-MSWP---VPGTLMIEPTESESKAELDRFCDALI 902 (993)
T ss_pred CeeeeEEEecccccc-------ccCC-CHHHHHHHHH-HcCcEEee-eccc---cCCEEEEEeeeeCCHHHHHHHHHHHH
Confidence 3211 1 1222 111 0111 2244555555 88997543 3342 2448999996 78889999999999
Q ss_pred HHHHHHHH
Q 009517 522 DFHKNFMD 529 (533)
Q Consensus 522 ~~l~~~~~ 529 (533)
.+.++..+
T Consensus 903 ~i~~e~~~ 910 (993)
T PLN02414 903 SIREEIAD 910 (993)
T ss_pred HHHHHHHH
Confidence 88887664
No 339
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=5.3e-13 Score=139.47 Aligned_cols=331 Identities=14% Similarity=0.066 Sum_probs=191.6
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHhccCC
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~~ 214 (533)
.+.+.+++...+.+..+.+ ...|+-..-..++.+...+...+.++ ...+.+++ .++|+.|+..++.+++ ++
T Consensus 47 s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~-~p 123 (475)
T PLN03226 47 SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALL-QP 123 (475)
T ss_pred CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhC-CC
Confidence 5788888888774332211 11133333234444433334444455 33334433 3667789999999998 89
Q ss_pred CCeEEEcCC---cCcchHHHHHH---hCCe----EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 215 NDGILCPIP---QYPLYSASIAL---HGGT----LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 215 gd~Vlv~~p---~~~~~~~~~~~---~g~~----~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
||+|+..+. +|.++...... .+.. ++++..+.+ +..+|+++|++.+... +++.|++. .++ +|
T Consensus 124 gD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~-~g~iD~d~Le~~l~~~-----~pklIv~~-~S~-~s 195 (475)
T PLN03226 124 HDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDES-TGLIDYDKLEKKAMLF-----RPKLIIAG-ASA-YP 195 (475)
T ss_pred CCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCC-CCCcCHHHHHHHHhhc-----CCeEEEEe-cCc-CC
Confidence 999998553 33333222111 1121 113444443 4579999999999764 67766543 333 56
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
...+ +++|.++|+++|+++++|+++.-.....+. ..+. + . +.| +++.|++|+|. |-+.|++.
T Consensus 196 ~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~-~~~p--~-~-----~~D---iv~~t~hK~L~---GP~Gg~I~ 257 (475)
T PLN03226 196 RDWD---YARMRKIADKVGALLMCDMAHISGLVAAQE-AASP--F-E-----YCD---VVTTTTHKSLR---GPRGGMIF 257 (475)
T ss_pred CccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCC-CCCC--C-C-----CCe---EEEecCccccc---CCCceEEE
Confidence 6666 788999999999999999998654432221 1110 0 0 123 77899999884 55558887
Q ss_pred EecCCHHHH-----------HH---HHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHH-HHHHHHHHHHHHHHH
Q 009517 365 VTGFSAEVR-----------EQ---IYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYC-AERDGILSSLARRAK 427 (533)
Q Consensus 365 ~~~~~~~~~-----------~~---l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 427 (533)
+ +++++ +. +..... ...++++...+++..+|.. .. ...+..+++..++.+
T Consensus 258 ~---~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~----------i~~~~~~~~~~~~~~na~ 324 (475)
T PLN03226 258 F---RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQ----------AMTPEFKAYQKQVKANAA 324 (475)
T ss_pred E---chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHH----------HhCcCHHHHHHHHHHHHH
Confidence 6 55433 21 211111 2233444444444444421 11 123456777888899
Q ss_pred HHHHHHhcCCCceEecCC-ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--CCCCceEEE
Q 009517 428 TLEDAFNSLEGITCNKAE-GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--VPGTWHFRC 504 (533)
Q Consensus 428 ~l~~~L~~~~g~~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~g~~~iRi 504 (533)
+|++.|.+. |+.++.+. ....+++++. +. +++ .. .+...|++.||.+..+.-.+. .-....||+
T Consensus 325 ~L~~~L~~~-G~~l~~~~t~~hi~lv~~~-~~---------gi~-~~-~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRi 391 (475)
T PLN03226 325 ALANRLMSK-GYKLVTGGTDNHLVLWDLR-PL---------GLT-GS-RVEKVLDLAHITLNKNAVPGDSSALVPGGVRI 391 (475)
T ss_pred HHHHHHHhC-CCEEEcCCCCCCEEEEEcc-CC---------CCC-HH-HHHHHHHHCCCEECCCCCCCCcccCCCCCccc
Confidence 999999886 99887632 1334444442 11 111 22 245778889999986542221 011225888
Q ss_pred Ee------cCCcCcHHHHHHHHHHHHHH
Q 009517 505 TI------LPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 505 s~------~~~~e~i~~~~~~l~~~l~~ 526 (533)
+. +.++++++++++.|.++++.
T Consensus 392 Gt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 392 GTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 44 37788999999999999884
No 340
>PRK04311 selenocysteine synthase; Provisional
Probab=99.64 E-value=7.6e-13 Score=137.23 Aligned_cols=330 Identities=14% Similarity=0.127 Sum_probs=191.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccCCC---cc--cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC
Q 009517 140 FSADSIERAWQILDQIPGRATGAYSHS---QG--IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y~~~---~G--~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 214 (533)
+|+++++++.+.+.... ..+|... .| +..+++.++++++ .+..+++++++.|+..++..+ .+
T Consensus 98 l~~~v~eav~~~~~~~~---~le~~l~~g~~g~r~~~~e~~lA~l~G--------ae~a~vv~sgtaAl~l~l~~l--~~ 164 (464)
T PRK04311 98 LSEAAIEAVTEAARGYS---NLEYDLATGKRGSRDRALAALLCALTG--------AEDALVVNNNAAAVLLALNAL--AA 164 (464)
T ss_pred CCHHHHHHHHHHHhccc---ccccchhhcccchHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHh--CC
Confidence 38999999988876532 1223221 11 3567777777764 456788888999999988765 58
Q ss_pred CCeEEEcCCcCcc------hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC--Cc--
Q 009517 215 NDGILCPIPQYPL------YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP--TG-- 284 (533)
Q Consensus 215 gd~Vlv~~p~~~~------~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP--tG-- 284 (533)
||+|+++...+.. ....+...|++++.++... ..++++++++|++ ++++|++.+++|| +|
T Consensus 165 GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~ 234 (464)
T PRK04311 165 GKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINE------NTALLLKVHTSNYRIEGFT 234 (464)
T ss_pred CCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCc------cCeEEEEEcCCCccccccC
Confidence 9999998864431 2345677899999887642 3579999999987 7999999999998 34
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccccccc----ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee
Q 009517 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENV----YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri 360 (533)
...+ +++|+++|++||+++|+|.....+. |.-. ..+.+.... ++ ..| +++.|.+|.++ |-..
T Consensus 235 ~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~-~~p~~~~~l-~~---GaD---iv~fSg~K~Lg---Gp~~ 300 (464)
T PRK04311 235 KEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLP-DEPTVQELL-AA---GVD---LVTFSGDKLLG---GPQA 300 (464)
T ss_pred CcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCCchhhHH-hc---CCc---EEEecCccccc---CCce
Confidence 4555 9999999999999999999643221 1100 011111211 11 234 78899999884 4468
Q ss_pred EEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcC---CCCCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 361 GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS---PPKVGDESYE--SYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 361 G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
|++++ .+++++++++..- ......-....+..+.|. ++. ..+. ..++.+....++..++.+.+.+.|+
T Consensus 301 G~i~g---~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~---~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~ 374 (464)
T PRK04311 301 GIIVG---KKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPE---KLAEEIPTLRLLTRSPEELRARAERLAAALK 374 (464)
T ss_pred EEEEE---cHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChh---hhhhhCcHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99988 8888887763211 111112222222222221 000 0000 0112223333556677888888887
Q ss_pred cCC--Cc--eEecC----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccc--eEEEcCCCCCCCCCCceEEE
Q 009517 435 SLE--GI--TCNKA----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATG--IVLVPGSGFGQVPGTWHFRC 504 (533)
Q Consensus 435 ~~~--g~--~~~~~----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--V~v~pg~~f~~~~g~~~iRi 504 (533)
..+ ++ .++.. .||- .+...+|.-... ....+. .... +.+.|++.. |..+- ..+ .|.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~gggs--~p~~~~~~~~v~-~~~~~~-~~~~-l~~~lr~~~~~i~~r~------~~~--~~~l 441 (464)
T PRK04311 375 AALGAAFAVEVVPSFSQVGGGS--LPVDRLPSAAVT-LTPKDR-SLEA-LAARLRLLPPPVIGRI------EDG--RLLL 441 (464)
T ss_pred hccCCCeeEEEEEccCccCCCC--CcCCCCCeEEEE-EeCCCC-CHHH-HHHHHhcCCCCEEEEE------ECC--EEEE
Confidence 753 32 33322 0110 111111110000 000011 1222 335566533 54442 333 6777
Q ss_pred Eec-CCcCcHHHHHHHHHHHHH
Q 009517 505 TIL-PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 505 s~~-~~~e~i~~~~~~l~~~l~ 525 (533)
-+. +.+++++.++++|.+++.
T Consensus 442 d~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 442 DLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred EeCcCCHHHHHHHHHHHHHHhh
Confidence 775 888888999999888753
No 341
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.62 E-value=4.3e-13 Score=128.57 Aligned_cols=231 Identities=13% Similarity=0.118 Sum_probs=153.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~ 244 (533)
...|.+.||.+-+.. --+.+.+++.|+..++..++ .+||.|+-.+--|.+ +...++..|.++.++.-
T Consensus 64 ~~vlE~RiAaLEGG~--------aa~a~aSG~AA~~~ai~~la-~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~ 134 (426)
T COG2873 64 TDVLEERIAALEGGV--------AALAVASGQAAITYAILNLA-GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP 134 (426)
T ss_pred HHHHHHHHHHhhcch--------hhhhhccchHHHHHHHHHhc-cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC
Confidence 466777777775421 23567888999999999998 899999998877776 34556778999998863
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
.|++.++++|++ +||+|+++...||.+.+++ +++|+++|+++++++|+|..+..-++ ..
T Consensus 135 -------~d~~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl-----~r 193 (426)
T COG2873 135 -------DDPENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYL-----CR 193 (426)
T ss_pred -------CCHHHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCccee-----cc
Confidence 379999999998 8999999999999999998 99999999999999999998865211 01
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH--HHHHh-------h----hccccCChHHH
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE--QIYKV-------A----SVNLCSNISGQ 391 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~--~l~~~-------~----~~~~~~~~~~q 391 (533)
+ + +. ..| |++.|++|.++| .|--+|-+++.+..-++.. .+..+ . ..+++...+..
T Consensus 194 P---~--~h---GAD---IVvHS~TK~igG-hGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~ 261 (426)
T COG2873 194 P---I--EH---GAD---IVVHSATKYIGG-HGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFII 261 (426)
T ss_pred h---h--hc---CCC---EEEEeecccccC-CccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHH
Confidence 1 1 11 244 889999999954 7888888877432222210 00000 0 01122222332
Q ss_pred HHHHHHcCCCCCCChhHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 392 ILASLVMSPPKVGDESYES-----YCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 392 ~a~~~~L~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
.+-...|++......-+.. -++.+.-+.++..++...+.+.|+..|.+.+
T Consensus 262 ~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~ 316 (426)
T COG2873 262 KARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAW 316 (426)
T ss_pred HHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeee
Confidence 3333333332111111111 1234455566677788889999998765544
No 342
>PLN02271 serine hydroxymethyltransferase
Probab=99.60 E-value=3.5e-12 Score=131.47 Aligned_cols=332 Identities=12% Similarity=0.041 Sum_probs=200.6
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccCCCcccHHHHHHHHHHHHhhcCCCCCC--CCEEEcCChHHHHHHHHHHhccCCC
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADP--NDIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
.+.+.+++-..+.+.+... ...|+-...+.++.....+...+.||.+... -||..- +++.|+..++.+++ +||
T Consensus 161 S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl-~PG 238 (586)
T PLN02271 161 CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLL-LPG 238 (586)
T ss_pred CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhc-CCC
Confidence 4666666655554432211 1223344445566666667777777744311 456665 56678888888888 899
Q ss_pred CeEEEcCCcCcchHHHH---------HHhCCeEEEEe--cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 216 DGILCPIPQYPLYSASI---------ALHGGTLVPYY--LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~---------~~~g~~~~~v~--~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
|+|+..+..+.++.... ...|..+..++ ++++ +..+|.++|++..... ++|+|++..-.||
T Consensus 239 D~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~-----rPKLII~g~Sayp-- 310 (586)
T PLN02271 239 DRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDF-----RPKILICGGSSYP-- 310 (586)
T ss_pred CEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhc-----CCeEEEECchhcc--
Confidence 99999988888765432 33455444444 5433 5579999999955543 8999988777777
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
..++ +++|+++|+++|+++++|.++......++. +.+... +.| ++..|.+|+|. |-|.|.+.
T Consensus 311 r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~-~~sP~~--------~aD---vvt~TTHKtLr---GPrGG~I~ 372 (586)
T PLN02271 311 REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKE-CVNPFD--------YCD---IVTSTTHKSLR---GPRGGIIF 372 (586)
T ss_pred CcCC---HHHHHHHHHHcCCEEEEECcccccccccCc-CCCCCc--------CCc---EEEeCCcccCC---CCCceEEE
Confidence 4455 888999999999999999999653333321 111000 234 77899999884 66668877
Q ss_pred EecCCH--------------------HHHHHHHHhhhccccCChHH--HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHH
Q 009517 365 VTGFSA--------------------EVREQIYKVASVNLCSNISG--QILASLVMSPPKVGDESYESYCAERDGILSSL 422 (533)
Q Consensus 365 ~~~~~~--------------------~~~~~l~~~~~~~~~~~~~~--q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 422 (533)
. ++ ++.+.+....-....++++. .++.+.++... ...+.+.-.++.
T Consensus 373 ~---r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea---------~~~efk~Ya~QV 440 (586)
T PLN02271 373 Y---RKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQV---------ATPEYKAYMQQV 440 (586)
T ss_pred e---cccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHH---------hChHHHHHHHHH
Confidence 6 32 34444433221122222222 22223333210 011224445567
Q ss_pred HHHHHHHHHHHhcCCCceEecC-CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--CCCC
Q 009517 423 ARRAKTLEDAFNSLEGITCNKA-EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--VPGT 499 (533)
Q Consensus 423 ~~~~~~l~~~L~~~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~g~ 499 (533)
.++.+.|.+.|.+. |++++.. ..+..+++++..- ++ +-..+.+.|++.||.+.--.-++. .-..
T Consensus 441 v~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~----------g~--~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~p 507 (586)
T PLN02271 441 KKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTL----------GL--TGKNYEKVCEMCHITLNKTAIFGDNGTISP 507 (586)
T ss_pred HHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCccc----------CC--CHHHHHHHHHHcCeEeccccCCCCCCCCCC
Confidence 77888899999887 9887653 3345566565410 11 123356889999998743222221 1112
Q ss_pred ceEEEEe------cCCcCcHHHHHHHHHHHHH
Q 009517 500 WHFRCTI------LPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 500 ~~iRis~------~~~~e~i~~~~~~l~~~l~ 525 (533)
..|||.. +..+++++++.+-|.++++
T Consensus 508 sGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 508 GGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 2689987 2567889999988888877
No 343
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.60 E-value=4.6e-13 Score=128.76 Aligned_cols=329 Identities=14% Similarity=0.088 Sum_probs=210.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcc----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~g 215 (533)
+++|.+++.+.+++... +..+--.+.| ..+|.+.+|++..+ +--++.++.--|....+..|.+ -||
T Consensus 187 Hp~V~~A~~~tl~~hG~-GAGGTRNIsG~s~~hv~LE~eLA~LHqK--------~aALlFsSCfVANDstLftLak~lpg 257 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGA-GAGGTRNISGHSKHHVRLEAELADLHQK--------EAALLFSSCFVANDSTLFTLAKKLPG 257 (570)
T ss_pred ChHHHHHHHHHHHHcCC-CcCCccccCCCCchhhhHHHHHHHHhcC--------cceeeeeeeeeccchHHHHHHHHCCC
Confidence 78999999999987543 2222223333 45788888888653 2233333333333333332210 278
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
-+|+-....+....+.++..+..-+-+.- -|++.|++.++.... .-+|.|-+++.+..+|.+.| +++|
T Consensus 258 cei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~--svPKivAFEtVhSM~Gavcp---leel 325 (570)
T KOG1360|consen 258 CEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCP---LEEL 325 (570)
T ss_pred cEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCC---HHHH
Confidence 88887777777777777777765544442 289999999987422 25678888899999999999 9999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
++++++||.+-++||++.-..|++.... + .+-+++-..+ .|+-+++.|+| |.- .||+.+ ...+++.
T Consensus 326 cDvah~yGAiTFlDEVHAVGlYG~rGaG--v----gerdGvm~kv-DiIsGTLgKaf-GcV---GGYIAa---t~~LvDm 391 (570)
T KOG1360|consen 326 CDVAHKYGAITFLDEVHAVGLYGPRGAG--V----GERDGVMHKV-DIISGTLGKAF-GCV---GGYIAA---TRKLVDM 391 (570)
T ss_pred HHHHHHhCceeeeehhhhhccccCCCCC--c----cccCCcchhh-hhcccchhhhc-ccc---cceehh---hhhHHHH
Confidence 9999999999999999987777532110 0 0000001111 26789999998 433 489987 8899999
Q ss_pred HHHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEec
Q 009517 376 IYKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452 (533)
Q Consensus 376 l~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~ 452 (533)
++.+.. .+.+-+|.....+..+.+- .+. ++-+.+++.-+++..++++.|.++ |+.+++...-+ +=+
T Consensus 392 iRSyAaGFIFTTSLPP~vl~GAleaVr~--------lk~-~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~pSHI-iPv 460 (570)
T KOG1360|consen 392 IRSYAAGFIFTTSLPPMVLAGALEAVRI--------LKS-EEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPNPSHI-IPV 460 (570)
T ss_pred HHHhcCceEEecCCChHHHHhHHHHHHH--------Hhh-hhhHHHHHHHHHHHHHHHHHHHHc-CCcccCCCcce-eee
Confidence 988764 2223333333333333210 001 122445556667778899999998 88776644322 111
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+..+. ...+.+..|+.++||+|..-.......|...+||++. .+.+-++.+++.+..+++++
T Consensus 461 ~vgda~------------l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 461 RVGDAA------------LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred eccCHH------------HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 122111 1334567889999999987555455567778999995 77777888888888887764
No 344
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.59 E-value=6.7e-12 Score=132.17 Aligned_cols=260 Identities=11% Similarity=0.082 Sum_probs=167.5
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCC-C--------CCC--CCEEEcCChHHHHHHHHHHhccC----------------
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGF-P--------ADP--NDIFLTDGASPAVHMMMQLLIRS---------------- 213 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~-~--------~~~--~~i~~t~G~~~al~~~~~~l~~~---------------- 213 (533)
..|.......++.+.+.+|+.+..+. + -.+ ..-++|+||++|+..++.+.+..
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 33444445789999999999876531 1 011 23477999999999888776411
Q ss_pred ---------CCCeEEEcCCcCcchHHHHHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 009517 214 ---------ENDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (533)
Q Consensus 214 ---------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N 281 (533)
++..|++++-.|.....++...|. +++.+|+++ ++.+|+++|+++|++....+.++-+|+-+..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 124688888889999989998888 788999975 458999999999986544443343344445577
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE
Q 009517 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (533)
Q Consensus 282 PtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG 361 (533)
.||.+-+ +++|+++|+++|+++++|.+|.+...-. .....+...+. ..| .+..+.+|.+.+. ..+|
T Consensus 277 ~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~----~~~r~~l~gle--~aD---Sit~d~HK~l~~P--~g~G 342 (522)
T TIGR03799 277 ETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLS----NTYRHLLKGIE--RAD---SVTIDAHKQLYVP--MGAG 342 (522)
T ss_pred CCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhC----HHHHHHhcCch--hCC---EEEEChhhcCCcC--cccE
Confidence 9999988 9999999999999999999998643211 11112222221 123 4577899976443 5578
Q ss_pred EEEEecCCHHHHHHHHHhhh------------ccccCChHH----HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 009517 362 YMEVTGFSAEVREQIYKVAS------------VNLCSNISG----QILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (533)
Q Consensus 362 ~v~~~~~~~~~~~~l~~~~~------------~~~~~~~~~----q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (533)
+++. .++++.+.+..... .+...+..+ ..++...+ -.+-++.+.++..+.
T Consensus 343 ~llv--r~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~l------------G~~G~~~ii~~~~~l 408 (522)
T TIGR03799 343 MVLF--KDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHII------------GRKGYELLIDQSIEK 408 (522)
T ss_pred EEEE--eCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHH------------hHHHHHHHHHHHHHH
Confidence 7776 35555554433100 011111111 22222222 123457777888888
Q ss_pred HHHHHHHHhcCCCceEecC-CceeEE
Q 009517 426 AKTLEDAFNSLEGITCNKA-EGAMYL 450 (533)
Q Consensus 426 ~~~l~~~L~~~~g~~~~~~-~gg~~~ 450 (533)
++++.+.|++.|+++++.+ +-+..+
T Consensus 409 a~~l~~~L~~~~~~el~~~p~l~iv~ 434 (522)
T TIGR03799 409 AKYFADLIQQQPDFELVTEPELCLLT 434 (522)
T ss_pred HHHHHHHHhhCCCeEEecCCCccEEE
Confidence 9999999999889988764 344333
No 345
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.58 E-value=2.2e-13 Score=138.40 Aligned_cols=313 Identities=14% Similarity=0.094 Sum_probs=183.4
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCC--CcccHHHHHHHHHHHHhhcCCCCC-CCCEEEc-CChHHHHHHHHHHhcc
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPAD-PNDIFLT-DGASPAVHMMMQLLIR 212 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~g~~~~-~~~i~~t-~G~~~al~~~~~~l~~ 212 (533)
|..+|+++++++......... ..++.+ ..-+.+.|+.++++++ ++ ..+|+++ .++|.+++.++..+.
T Consensus 11 P~~~~~~v~~a~~~~~~~~~~--~~hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~f~~gs~T~a~~~~~~~l~- 81 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAASLFG--TSHRQAPVKNLVGRVREGLAELFS------LPDGYEVILGNGGATAFWDAATFGLI- 81 (361)
T ss_pred CcCCCHHHHHHHHhcCccccc--cCcCChHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchhHHHHHHHHhcc-
Confidence 444578888886543211100 112222 1224556777777764 33 3478886 559999999999986
Q ss_pred CCCCeEEEcCCcCcc-hHHHHHHh--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 213 SENDGILCPIPQYPL-YSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~-~~~~~~~~--g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
. ++.+++..-.|.. +...++.+ +.++..++.+.. ..++. .+. +++++|.+++..|.||++.+
T Consensus 82 ~-~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~-----~~~------~~~~lV~~~h~et~tG~~~p- 146 (361)
T TIGR01366 82 E-KKSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG--SAPEP-----QAD------PGVDVIAWAHNETSTGVAVP- 146 (361)
T ss_pred c-ccccEEecCHHHHHHHHHHHhhhccCCceEEecCCC--CCCCC-----ccC------CCCCEEEEcccCCccceecc-
Confidence 3 3344454555543 34444442 235666665432 13333 122 27999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+++| ++++|+++|+|.+.+- |..+ .++.. -| +++.|-.|++ |.+|- ++.+++ +
T Consensus 147 --i~~I---~~~~g~~~iVDavqs~----g~~~-idv~~---------~D---~~~~s~~K~l-g~~~G-l~~~~~---s 199 (361)
T TIGR01366 147 --VRRP---EGSDDALVVIDATSGA----GGLP-VDIAE---------TD---VYYFAPQKNF-ASDGG-LWLAIM---S 199 (361)
T ss_pred --cccc---cccCCCeEEEEcCccc----cCCC-CCHHH---------CC---EEEEEchhhc-CCCCc-eEEEEE---C
Confidence 5555 5889999999999974 3222 22211 13 6688899999 54532 444454 7
Q ss_pred HHHHHHHHHhhh----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHH
Q 009517 370 AEVREQIYKVAS----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARR 425 (533)
Q Consensus 370 ~~~~~~l~~~~~----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 425 (533)
+++++++..... +...++.....++..+++ ...++ ++.+.++.++.
T Consensus 200 ~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~----------~l~~~gg~e~~~~r~~~l 269 (361)
T TIGR01366 200 PAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQID----------WMNGNGGLDWAVARTADS 269 (361)
T ss_pred HHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHH
Confidence 777766552210 112223333334444442 11121 45666788888
Q ss_pred HHHHHHHHhcCCCceEec-CC---ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCce
Q 009517 426 AKTLEDAFNSLEGITCNK-AE---GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWH 501 (533)
Q Consensus 426 ~~~l~~~L~~~~g~~~~~-~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~ 501 (533)
.+++++.|.+++++.... .. ...... +.++.+ + +..++ ...|+++||.+.+|... -+.+.
T Consensus 270 ~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~--v~~~~g---------~-~~~~v-~~~L~~~gI~i~~~~~~---l~~~~ 333 (361)
T TIGR01366 270 SSRLYSWAQERPYATPFVTDPGKRSQVVGT--IDFVDD---------I-DAATV-AKILRANGIVDTEPYRK---LGRNQ 333 (361)
T ss_pred HHHHHHHHHhCCCcccCCCChhhcccceEE--EECCCc---------c-CHHHH-HHHHHHCCCeeccCccc---cCCCc
Confidence 999999999985455432 11 111111 111211 1 22333 34557789999876422 12348
Q ss_pred EEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 502 FRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 502 iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
||||+. ++.++|++++++|++++++
T Consensus 334 vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 334 LRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 999995 8999999999999998775
No 346
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.58 E-value=4.7e-14 Score=142.26 Aligned_cols=240 Identities=18% Similarity=0.224 Sum_probs=147.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 248 (533)
+.+..+.+|+.++. .+-.++++|++.++..++.+++ .+||+|+++..+|-...+++...|+.+++++.. .+
T Consensus 68 I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~-~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~ 138 (417)
T PF01276_consen 68 IKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALC-RPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DN 138 (417)
T ss_dssp HHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHT-TTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-
T ss_pred HHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-cc
Confidence 45666666666642 2357889999999999999999 899999999999999999999999999998876 44
Q ss_pred CCC----CCH-----HHHHHHHHHHHhcCCCeeE---EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-c
Q 009517 249 GWG----LET-----SEVKKQLEAAKAKGITVRA---LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE-N 315 (533)
Q Consensus 249 ~~~----ld~-----~~l~~~i~~~~~~g~~~~~---iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~-~ 315 (533)
.++ +++ +.++++|++. +..++ ++|++|+. -|++++ +++|+++|+++++.|++||+|.. +
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~----p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~ 210 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEH----PDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHF 210 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHC----TTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhC----ccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccc
Confidence 454 355 9999999874 34444 99999986 699988 99999999999999999999954 4
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe-eEEEEEecCCH-HHHHHHHHhhh--ccccCChHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSA-EVREQIYKVAS--VNLCSNISGQ 391 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r-iG~v~~~~~~~-~~~~~l~~~~~--~~~~~~~~~q 391 (533)
.|. ..+ .+...+..+ ...+..+++++|.+|++. ++. .+++.... +. --.+++..... .+.+|+-+..
T Consensus 211 ~F~-~lp-~~a~~~gad---~~~~~~~~vvqS~HKtL~---altQts~lh~~~-~~~v~~~~~~~~l~~~~TTSPSY~lm 281 (417)
T PF01276_consen 211 GFH-PLP-RSALALGAD---RPNDPGIIVVQSTHKTLP---ALTQTSMLHVKG-DRIVDHERVNEALSMHQTTSPSYPLM 281 (417)
T ss_dssp GCS-GGG-TTCSSTTSS----CTSBEEEEEEEHHHHSS---S-TT-EEEEEET-CCCTTHHHHHHHHHHHS-SS--HHHH
T ss_pred cCC-CCc-cchhhccCc---cccccceeeeechhhccc---ccccceEEEecC-CCcccHHHHHHHHHHHcCCChHHHHH
Confidence 443 111 111111111 024567899999999984 555 45555532 21 11233333322 2233333333
Q ss_pred HHHHHHcCCCCCCChhHHHH-HHHHHHHHHHHHHHHHHHHHHH---hcCCCceEecC
Q 009517 392 ILASLVMSPPKVGDESYESY-CAERDGILSSLARRAKTLEDAF---NSLEGITCNKA 444 (533)
Q Consensus 392 ~a~~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L---~~~~g~~~~~~ 444 (533)
+.+..+.. .. ..+-+++.++..++.+.+++.| +++.++++..|
T Consensus 282 ASlD~a~~----------~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 282 ASLDVARA----------QMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp HHHHHHHH----------HHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred HHHHHHHH----------HHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 22222210 11 1223445555566666677776 55666665544
No 347
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.58 E-value=7e-12 Score=129.74 Aligned_cols=198 Identities=13% Similarity=0.144 Sum_probs=135.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCC-----cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHS-----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~-----~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
|+++++++.+.+.... ...|.-. .-+..+++.++++++ .+..+++++++.|+..++..+ .+|
T Consensus 94 ~~~vieAv~~~~~~y~---~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~l--~~G 160 (454)
T TIGR00474 94 AEEAIEAVTDAARGYS---NLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNTL--AKG 160 (454)
T ss_pred CHHHHHHHHHHHhccc---chhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHh--CCc
Confidence 7999999988887532 2223211 114677888888864 334667788888998888664 589
Q ss_pred CeEEEcCCcCcc------hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC--c--c
Q 009517 216 DGILCPIPQYPL------YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT--G--Q 285 (533)
Q Consensus 216 d~Vlv~~p~~~~------~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt--G--~ 285 (533)
|+|+++...|.. +...+...|++++.++.+. ..|+++++++|++ +|++|++.+++|++ | .
T Consensus 161 deVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~ 230 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITE------NTALLLKVHTSNYRIVGFTE 230 (454)
T ss_pred CEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCc------CCEEEEEEccCcccccCCCC
Confidence 999999876432 2345677899999887542 3579999999977 89999999999995 6 3
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccccC--CCCccc-HHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP--EKKFHS-FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~ 362 (533)
+.+ +++|+++|++||+++|+|.....+.-.+ +.+..+ +... .++ ..| +++.|.+|.++ |-..|+
T Consensus 231 ~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~-~~~---GaD---iv~fSg~K~Lg---Gp~~G~ 297 (454)
T TIGR00474 231 EVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEV-IAA---GVD---LVTFSGDKLLG---GPQAGI 297 (454)
T ss_pred CCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccH-hHc---CCC---EEEecCccccC---CCeEEE
Confidence 566 9999999999999999997532210000 000111 1111 111 234 77889999884 445899
Q ss_pred EEEecCCHHHHHHHH
Q 009517 363 MEVTGFSAEVREQIY 377 (533)
Q Consensus 363 v~~~~~~~~~~~~l~ 377 (533)
+++ .+++++.+.
T Consensus 298 i~g---~~~~i~~l~ 309 (454)
T TIGR00474 298 IVG---KKELIERLK 309 (454)
T ss_pred EEE---CHHHHHhhh
Confidence 888 788877654
No 348
>PRK15029 arginine decarboxylase; Provisional
Probab=99.58 E-value=5.8e-13 Score=143.86 Aligned_cols=177 Identities=16% Similarity=0.133 Sum_probs=125.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 248 (533)
+.+..+..|+.++ .....+++||+|.++..++.+++ .+||+|+++..+|-+..+.+.+.|+.+++++... +
T Consensus 207 I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~-~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~-~ 277 (755)
T PRK15029 207 FGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR-N 277 (755)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-c
Confidence 4555555666553 12457889999999999999998 8999999999999999999999999999986544 3
Q ss_pred CCCC----C-----HHHHHHHHHHHH----hcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-
Q 009517 249 GWGL----E-----TSEVKKQLEAAK----AKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE- 314 (533)
Q Consensus 249 ~~~l----d-----~~~l~~~i~~~~----~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~- 314 (533)
.+++ + ++.++++|+... ..+.+++++++++|+. -|++++ +++|+++|+++++.|++||+|..
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah 353 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccc
Confidence 4443 4 899999997631 1122445899999986 689988 89999999999999999999954
Q ss_pred ccccCCCCcccHHHHH-hhcCCCCCCceEEEEecCCccCCCCCCCeeE-EEEE
Q 009517 315 NVYVPEKKFHSFKKVS-RSMGYGEKDISLVSFQSVSKGYYGECGKRGG-YMEV 365 (533)
Q Consensus 315 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG-~v~~ 365 (533)
|.|.+.-+..+ .+. .......++ +++++|.+|++. ++.-| ++++
T Consensus 354 ~~F~~~~p~~s--a~~~~~~~~~Gad--~~vvqStHKtL~---alTQaS~LHv 399 (755)
T PRK15029 354 ARFNPIYADHY--AMRGEPGDHNGPT--VFATHSTHKLLN---ALSQASYIHV 399 (755)
T ss_pred cccCccccccc--cccccccccCCCc--eEEEEchhhccc---chhhhhhhee
Confidence 44543212101 110 000000122 488999999984 55544 4444
No 349
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.56 E-value=4.7e-12 Score=127.29 Aligned_cols=324 Identities=15% Similarity=0.090 Sum_probs=181.4
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccCCCcccHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHHHhccCCC
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
.+.+.++....+.+..... ...|+-..-+.++.+...+...+.|+...+.. +|-. .+++.|...++.+++ +||
T Consensus 33 Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp-~SGs~An~av~~aLl-~pG 110 (399)
T PF00464_consen 33 SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQP-HSGSQANLAVYMALL-KPG 110 (399)
T ss_dssp -HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE----SSHHHHHHHHHHHHT--TT
T ss_pred CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeec-CCchHHHHHHHHHHH-hhc
Confidence 3555555544444432100 11233344355666666677777777332111 3333 456688999999999 899
Q ss_pred CeEEEcCCcCcchHH---H--H-----HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 216 DGILCPIPQYPLYSA---S--I-----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~---~--~-----~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
|+|+..++...+|.. . . .....+.+.|+++++ +..+|.+++++.++.. ++++|++-.-..|-
T Consensus 111 D~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~-----kPklIi~G~S~y~~-- 182 (399)
T PF00464_consen 111 DTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEH-----KPKLIICGASSYPR-- 182 (399)
T ss_dssp -EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH-------SEEEEE-SSTSS--
T ss_pred CcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhc-----CCCEEEECchhccC--
Confidence 999999988776532 1 1 224467889999865 6789999999999997 89998876544432
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
. -+++++.++|++.|.++++|-++ .+++-+|. +.+... +.| |+.+|..|+| +|-|.|.|.
T Consensus 183 ~---~d~~~~reIad~vga~l~~D~sH~~GLIa~g~--~~~P~~--------~AD---vvt~sThKtl---~GPrggiI~ 243 (399)
T PF00464_consen 183 P---IDFKRFREIADEVGAYLMADISHIAGLIAGGL--FPNPFP--------YAD---VVTGSTHKTL---RGPRGGIIL 243 (399)
T ss_dssp ------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS--S--GCC--------TSS---EEEEESSGGG----SSS-EEEE
T ss_pred c---cCHHHHHHHHHhcCcEEEecccccccceehhe--ecCccc--------cce---EEEeeccccc---cccCceEEE
Confidence 2 23899999999999999999998 45554442 222111 234 7789999998 488889998
Q ss_pred EecCC--------------HHHHHHHHHhhhcc--ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 009517 365 VTGFS--------------AEVREQIYKVASVN--LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428 (533)
Q Consensus 365 ~~~~~--------------~~~~~~l~~~~~~~--~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (533)
+ + +++.+.+.+..-.. .++.....++.+.+|.. ....+.++-.++..++.+.
T Consensus 244 ~---~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~e---------a~~~~fk~Ya~qVv~NAk~ 311 (399)
T PF00464_consen 244 T---NKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKE---------ALSPEFKEYAKQVVKNAKA 311 (399)
T ss_dssp E---S-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHH---------HTSHHHHHHHHHHHHHHHH
T ss_pred E---cCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhc---------ccCHHHHHHHHHHHHHHHH
Confidence 8 6 78888887754322 22222222222223310 0011234455667778889
Q ss_pred HHHHHhcCCCceEec-CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-C-CCCceEEEE
Q 009517 429 LEDAFNSLEGITCNK-AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-V-PGTWHFRCT 505 (533)
Q Consensus 429 l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-~-~g~~~iRis 505 (533)
|.+.|.+. |++++. ......+|+++... +. +...+.+.|++.||.+..-...+. . -....|||+
T Consensus 312 La~~L~~~-G~~v~~ggTd~H~vlvd~~~~----------~~--~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlG 378 (399)
T PF00464_consen 312 LAEALQER-GFKVVTGGTDNHQVLVDLRSF----------GI--DGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLG 378 (399)
T ss_dssp HHHHHHHT-T-EEGGGS-SSSEEEEEGGGG----------TS---HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEE
T ss_pred HHHHHhhC-CcEEEECCCCCCeEEEEeccc----------cc--chHHHHHHHHhcCeeecccccCCCCCCCCCCEEEEC
Confidence 99999998 998875 33445667666411 11 222356789999998853211111 1 112379999
Q ss_pred ec------CCcCcHHHHHH
Q 009517 506 IL------PQEDKIPAIVT 518 (533)
Q Consensus 506 ~~------~~~e~i~~~~~ 518 (533)
.. ..+++++++.+
T Consensus 379 T~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 379 TPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp SHHHHHTT--HHHHHHHHH
T ss_pred CHHHHhCCCCHHHHHHHHh
Confidence 83 44555555544
No 350
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.55 E-value=3.7e-13 Score=124.83 Aligned_cols=340 Identities=17% Similarity=0.183 Sum_probs=212.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vl 219 (533)
+|+|+++...+|..... +..+... +|.+-...+.... ..-+-++++++++||..++++..+.-.+ .-|+
T Consensus 63 hp~VV~A~~kQmat~~t--N~RFlhd----~lv~cA~~l~stl----PeLsvc~F~NSGSEANDLALRLAR~ftkhqDvI 132 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATIST--NNRFLHD----ELVQCARTLTSTL----PELSVCFFVNSGSEANDLALRLARNFTKHQDVI 132 (452)
T ss_pred CHHHHHHHHHHHhHhcc--cchhhHH----HHHHHHHHHhhcC----CCceEEEEecCCchhhHHHHHHHHhhcccCceE
Confidence 58999999998886433 3333332 3333222222211 2245678999999999999998862122 3477
Q ss_pred EcCCcCcchHHHHHH-------hCC---e--EEE-EecCC--CCCCC-----------CCHHHHHHHHHHHHhcCCCeeE
Q 009517 220 CPIPQYPLYSASIAL-------HGG---T--LVP-YYLDE--ATGWG-----------LETSEVKKQLEAAKAKGITVRA 273 (533)
Q Consensus 220 v~~p~~~~~~~~~~~-------~g~---~--~~~-v~~~~--~~~~~-----------ld~~~l~~~i~~~~~~g~~~~~ 273 (533)
+.+-.|+++...... .|. + .+. .|+.+ .+.|. .=.+.+++.+.+....|..+.+
T Consensus 133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA 212 (452)
T KOG1403|consen 133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA 212 (452)
T ss_pred EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence 777788877543321 111 1 111 11111 00011 1135677777777777777777
Q ss_pred EEEeCCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccC
Q 009517 274 LVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (533)
Q Consensus 274 iil~~p~NPtG~~~s~~-~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 352 (533)
+|-.+-+.-.|.++|+. ..+++++..+.+|-+.|.||++.+|..-|. .++++..+ .+ -|| |.++.|.+
T Consensus 213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~-hyWafq~y--~f---iPD-----IVtmgKpm 281 (452)
T KOG1403|consen 213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS-HYWAFQTY--NF---IPD-----IVTMGKPM 281 (452)
T ss_pred HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch-hhhhhhhh--cc---ccc-----hheecccC
Confidence 77777788888765554 599999999999999999999999776553 55655432 12 477 66899999
Q ss_pred CCCCCCeeEEEEEecCCHHHHHHHHHhh--h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 009517 353 YGECGKRGGYMEVTGFSAEVREQIYKVA--S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTL 429 (533)
Q Consensus 353 ~gl~G~riG~v~~~~~~~~~~~~l~~~~--~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 429 (533)
| .|.++++++. .+++.+.+..-. . .++++||.+++++.+.|+.. +-+.+.+.-++..++|
T Consensus 282 -G-NGhPVa~Vat---tkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~------------e~E~Lq~ha~~vG~~L 344 (452)
T KOG1403|consen 282 -G-NGHPVAAVAT---TKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVC------------EDENLQEHAQQVGEKL 344 (452)
T ss_pred -C-CCCeeeEEec---cHHHHHHhccccceehhccCCCchhHHHHHHHHHHH------------hhhhHHHHHHHHHHHH
Confidence 5 7999999998 899998887522 1 67899999999999888521 1244555566666677
Q ss_pred HHHHhcC----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChH-HHHHHHHHccceEEEcCCCCCCCCCCceEEE
Q 009517 430 EDAFNSL----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDA-FYCRRLLNATGIVLVPGSGFGQVPGTWHFRC 504 (533)
Q Consensus 430 ~~~L~~~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRi 504 (533)
...|+++ +-+.-++.-| +|+++++-. |.....+.+... ..+.++-+.++|++..- .++.+.+.|
T Consensus 345 ~~lL~~~k~kh~~IGDvRGvG---LFiGIdLVk---D~~tRtP~tk~A~~~v~rlke~y~VLlsaD-----GPh~NilKi 413 (452)
T KOG1403|consen 345 EVLLRRLKQKHECIGDVRGVG---LFIGIDLVK---DRKTRTPDTKEAHWVVNRLKELYRVLLSAD-----GPHRNILKI 413 (452)
T ss_pred HHHHHHHhhhccceeccccce---EEEeeeeec---ccccCCCcHHHHHHHHHHHHHhhhEEEecC-----CCCCceeec
Confidence 7777665 2233334433 333344221 111111111122 23445555677988741 245557777
Q ss_pred Ee--cCCcCcHHHHHHHHHHHHHHHHH
Q 009517 505 TI--LPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 505 s~--~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
-+ +-++++.++.+..|++++.-+.+
T Consensus 414 KPPmCFneena~e~v~~ld~iLT~mee 440 (452)
T KOG1403|consen 414 KPPMCFNEENADEFVLGLDEILTVMEE 440 (452)
T ss_pred CCCcccChhhHHHHHHHHHHHHHHHHH
Confidence 66 47889999999999998875443
No 351
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=7.2e-12 Score=121.64 Aligned_cols=331 Identities=14% Similarity=0.114 Sum_probs=206.5
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
.+.|.++.-..+.+.... ...-|+-..-..++.+...+...+.|| .+.-+|-..+|+ +|...++.+++ +|||+
T Consensus 39 S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhSGs-~AN~av~~All-~pGDt 114 (413)
T COG0112 39 SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHSGS-QANQAVYLALL-QPGDT 114 (413)
T ss_pred CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCCch-HHHHHHHHHHc-CCCCe
Confidence 577888776666543211 122344455455666666677777777 445677777766 67777788888 89999
Q ss_pred EEEcCCcCcchHHHH---HHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 218 ILCPIPQYPLYSASI---ALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~---~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
|+-.+-.+.+|..-- ...| .+.+.|+++.+ +..+|.|++++.+... ++|+|+.-.-..|- .++ +
T Consensus 115 imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~-----kPK~ii~G~SaY~r--~id---~ 183 (413)
T COG0112 115 IMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEV-----KPKLIIAGGSAYSR--PID---F 183 (413)
T ss_pred EecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHh-----CCCEEEECcccccc--ccC---H
Confidence 999887777765322 2223 36777777765 5689999999999987 89988843322221 222 9
Q ss_pred HHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 293 RAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
+++.++|++.|.++++|-++ .+++-+|. +++... +.| |+.+|.+|+| .|-|.|.|++ .+.+
T Consensus 184 ~~~reIad~VGA~L~~DmAHiaGLVA~G~--~p~P~~--------~Ad---vVTtTTHKTl---rGPrGG~Il~--~~ee 245 (413)
T COG0112 184 KRFREIADEVGAYLMVDMAHVAGLIAGGV--HPNPLP--------HAD---VVTTTTHKTL---RGPRGGIILT--NDEE 245 (413)
T ss_pred HHHHHHHHHhCceEEehHHHHHHHHhccc--CCCCCC--------ccc---eEeCCcccCC---CCCCceEEEe--ccHH
Confidence 99999999999999999998 56655543 222111 234 7789999998 4889999988 2358
Q ss_pred HHHHHHHhhhccccCChHHHHHH--HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCC-cee
Q 009517 372 VREQIYKVASVNLCSNISGQILA--SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAE-GAM 448 (533)
Q Consensus 372 ~~~~l~~~~~~~~~~~~~~q~a~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-gg~ 448 (533)
+.+.+.+.--....++++.-.++ +-++.. ......+.-.++..++.+.|.+.|.+. |++++..- -..
T Consensus 246 l~kkin~aVFPg~qggpl~HviAakaVa~~E---------al~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnH 315 (413)
T COG0112 246 LAKKINSAVFPGLQGGPLMHVIAAKAVAFKE---------ALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNH 315 (413)
T ss_pred HHHHhhhhcCCccCCChHHHHHHHHHHHHHH---------HcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccce
Confidence 88877763322222233332222 222211 011112344455677888899999887 99887632 233
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCC-CCCC--CCCCceEEEEec------CCcCcHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGS-GFGQ--VPGTWHFRCTIL------PQEDKIPAIVTR 519 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~-~f~~--~~g~~~iRis~~------~~~e~i~~~~~~ 519 (533)
.+.+++. +.+ . +-..+..+|.+.||.+.--. .|.. +-....|||... ..++++++..+-
T Consensus 316 l~lVDl~-~~~---------~--~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~ 383 (413)
T COG0112 316 LVLVDLR-SKG---------L--TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADL 383 (413)
T ss_pred EEEEEcc-cCC---------C--CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHH
Confidence 4445555 211 1 12235678888999874311 1210 111225899872 456688888888
Q ss_pred HHHHHHH
Q 009517 520 LTDFHKN 526 (533)
Q Consensus 520 l~~~l~~ 526 (533)
|.++++.
T Consensus 384 I~~vl~~ 390 (413)
T COG0112 384 IADVLDG 390 (413)
T ss_pred HHHHHhc
Confidence 8888775
No 352
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.53 E-value=9.7e-14 Score=135.42 Aligned_cols=256 Identities=16% Similarity=0.165 Sum_probs=165.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
.+++.+++.+.... ...|+...-..+|.+.++++++ .+..+++.+|+.+..++++.++ .|++.|++
T Consensus 8 ~~~m~~a~~~a~~g-----d~~Yg~D~~~~~l~~~i~~l~g--------~e~a~f~~sGT~An~~al~~~~-~~~~~vi~ 73 (290)
T PF01212_consen 8 TPAMLEAMAAANVG-----DDAYGEDPTTARLEERIAELFG--------KEAALFVPSGTMANQLALRAHL-RPGESVIC 73 (290)
T ss_dssp -HHEEHHHHHTTSB------CCTTSSHHHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHHH-HTTEEEEE
T ss_pred CHHHHHHHHccccC-----CcccCCChhHHHHHHHHHHHcC--------CCEEEEeCCCChHHHHHHHHHH-hcCCceec
Confidence 47777777444332 3368888878899999999875 4566789999999999999999 79999999
Q ss_pred cCCcCcch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC-CccCCCHHHHHHHH
Q 009517 221 PIPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP-TGQVLAEENQRAIV 296 (533)
Q Consensus 221 ~~p~~~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP-tG~~~s~~~l~~i~ 296 (533)
..++|... .......|.++++++..+. ..+|+++|++.+.......+++++|+|++|+|- .|.++|.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~--G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPSDDD--GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBECTG--TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCCccc--CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 99876532 2233568999999998752 278999999999985333347999999999986 48999999999999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+.++.|.+--.-.- .....++..+... -| ++-.|++|.+ |...|.+++ .++++++..
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~--~~~~~~~~e~~~~-----~D---~v~~~~tK~~----g~~~Gavl~--~~~~~i~~~ 215 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAA--AALGVSLAEIAAG-----AD---SVSFGGTKNG----GAPGGAVLA--GNKEFIAKA 215 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHH--CHHHHHHHHHHTT-----SS---EEEEETTSTT-----SSSEEEEE--ESHHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhh--hcccccHHHHhhh-----CC---EEEEEEEccc----ccccceEEE--echHHHHHH
Confidence 999999999999987421100 0011233333322 24 4456899986 345566665 388876654
Q ss_pred HHhhh-ccc---cCChHHH-----HHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec
Q 009517 377 YKVAS-VNL---CSNISGQ-----ILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK 443 (533)
Q Consensus 377 ~~~~~-~~~---~~~~~~q-----~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 443 (533)
..... ... ....+++ .++...++. | .....+..++.+.|.+.|+.+ +..+..
T Consensus 216 ~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~----------~----~~~~~~~~~~A~~La~~l~~~-~~~~~~ 276 (290)
T PF01212_consen 216 RRQRKRLGGGMRQAGVLAAAELYQFAALRALEL----------W----LERARHANAMAKRLAAGLEAL-GGVLPR 276 (290)
T ss_dssp HHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEEC----------S----HHHHHCHHHHHHCHHHCHHEE-CEEEET
T ss_pred HHHHHHhccCeeecceeeeechhhHHHHHHHHh----------h----HHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 44322 111 1112222 123333321 1 223345566677889999888 444433
No 353
>PLN02263 serine decarboxylase
Probab=99.51 E-value=5.4e-11 Score=122.05 Aligned_cols=294 Identities=11% Similarity=-0.010 Sum_probs=192.1
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC--CCCeEEEcCCcCcchHHHHHHhCCeEEEEecC
Q 009517 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS--ENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (533)
Q Consensus 168 G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~ 245 (533)
+..++.+.+.+|+.+.+|.+-+.-.=++|+||++++..++.+.+ + +...|++++-+|.....++..+|.+++.+|++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aAR-e~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGR-EVFPDGILYASRESHYSVFKAARMYRMECVKVDTL 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHH-hhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC
Confidence 46889999999999988843211124789999999999999886 3 33478889999999999999999999999986
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC-----EEEEccccccccccCC
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL-----VLLADEVYQENVYVPE 320 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~-----~lI~De~y~~~~~~~~ 320 (533)
+ ++.+|+++|+++|.+. +.++-+|+.+-...++|.+=+ +++|.++|+++|+ |+.+|.+|.++..--.
T Consensus 209 ~--~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~ 280 (470)
T PLN02263 209 V--SGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFV 280 (470)
T ss_pred C--CCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhc
Confidence 4 5689999999999763 112445556677889999966 9999999999997 9999999988654100
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh----h--hccccCChH-----
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----A--SVNLCSNIS----- 389 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~----~--~~~~~~~~~----- 389 (533)
... +.+....+ ..-| ..+.+|.+ + .-+..|.++. ....++.+..- . ..+...+..
T Consensus 281 ~~~-------~~~df~~~-vDSI-svD~HK~l-~-~P~~cgvll~---R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al 346 (470)
T PLN02263 281 KRA-------PKVTFKKP-IGSV-SVSGHKFV-G-CPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRNGHAPI 346 (470)
T ss_pred ccc-------cccCCCcC-ccEE-EECCcccc-C-CCcCEEEEEE---ehhhHhhhccChHhhCCCCCCcCCCCCcHHHH
Confidence 000 00100011 2223 45789976 3 5688898887 44444333211 0 112222222
Q ss_pred HHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCceeEEecccCCCHHHHHHHHhcC
Q 009517 390 GQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGAMYLFPRIQLPEKAIKAAEAEK 468 (533)
Q Consensus 390 ~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~ 468 (533)
...+....+ -.+.++++.++..++.+++.+.|++. |+. +..|.....+|. .|.
T Consensus 347 ~lW~~L~~~------------G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~---~p~---------- 400 (470)
T PLN02263 347 FLWYTLNRK------------GYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFE---RPK---------- 400 (470)
T ss_pred HHHHHHHHh------------CHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEe---cCc----------
Confidence 222222222 12345666777778888999999988 654 455666555542 121
Q ss_pred CCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 469 TVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 469 ~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+.. ..+|..+.+ ... .++|.+. ++.+.++++++.|++..+.+
T Consensus 401 ---~~~------~~~gW~L~~------~~~--~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 401 ---DEE------FVRRWQLAC------QGN--IAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred ---hHH------hhcceEEcc------CCC--cEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 111 124555553 122 5677774 57788999999888876654
No 354
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.51 E-value=8.3e-12 Score=129.08 Aligned_cols=272 Identities=11% Similarity=0.084 Sum_probs=185.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC----C--
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----E-- 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----~-- 214 (533)
++.+.+.+...+...-. ....|+ +..++.+.+..++.+.++.+ ..-.=.+|+|+++++.+++.+.... .
T Consensus 75 ~~~a~~~~~~~~~~nl~-d~~~~p---~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~ 149 (460)
T COG0076 75 PPVAAELLVSALNKNLG-DPDESP---AAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALA 149 (460)
T ss_pred HHHHHHHHHHHHhhcCC-CcccCh---hHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhh
Confidence 55666666666665332 233443 57899999999999988854 2234588999999999888876411 0
Q ss_pred -C------CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeE--EEEeCCCCCCcc
Q 009517 215 -N------DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA--LVVINPGNPTGQ 285 (533)
Q Consensus 215 -g------d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~--iil~~p~NPtG~ 285 (533)
+ .+|+++.-.+..+..++..+|.....+++.+. ++.+|+++++++|.+. +.. |+.+-++.+||.
T Consensus 150 ~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~------t~~g~vV~~aGtT~~G~ 222 (460)
T COG0076 150 ESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDEN------TIGGVVVGTAGTTDTGS 222 (460)
T ss_pred cccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhh------ccCceEEEEecCCCCCc
Confidence 1 16999999999999999999999999999876 6799999999999984 433 777788999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+=+ +++|.++|+++++++.+|.+|.++..--..+... +.-. .+.+..| ..+++|. |++=..+||++.
T Consensus 223 iDd---i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~---~~f~----l~~vdSI-t~d~HK~--g~aP~~~G~il~ 289 (460)
T COG0076 223 IDD---IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR---WDFG----LEGVDSI-TVDGHKY--GLAPIGCGVVLF 289 (460)
T ss_pred cCC---HHHHHHHHHHcCCcEEEEccccceeecccCccch---hhcC----CCCceEE-EECcccc--cCCCCCceEEEE
Confidence 855 9999999999999999999999876411111111 0111 2333334 5689995 446678899988
Q ss_pred ecCCH-HHHHHHHHhh---------hccccCChHH-----HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 366 TGFSA-EVREQIYKVA---------SVNLCSNISG-----QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLE 430 (533)
Q Consensus 366 ~~~~~-~~~~~l~~~~---------~~~~~~~~~~-----q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 430 (533)
.++ ++.+.+.-.. +.+...+..+ +++....| -.+..+++.++..+.++++.
T Consensus 290 --rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l------------G~eGy~~l~~~~~~~a~~la 355 (460)
T COG0076 290 --RDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRL------------GREGYRKLLDRTLELARYLA 355 (460)
T ss_pred --ECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHh------------CHhHHHHHHHHHHHHHHHHH
Confidence 355 3444433111 1111122222 22222222 13446777788888899999
Q ss_pred HHHhcCCCceEec-CCceeEEe
Q 009517 431 DAFNSLEGITCNK-AEGAMYLF 451 (533)
Q Consensus 431 ~~L~~~~g~~~~~-~~gg~~~~ 451 (533)
+.|++.+.++++. |.....+|
T Consensus 356 ~~l~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 356 EELEKLGDFELVNEPELPIVAF 377 (460)
T ss_pred HHHHhCCCcEeecCCccceEEE
Confidence 9999985588765 65554443
No 355
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.51 E-value=8.4e-12 Score=133.62 Aligned_cols=180 Identities=17% Similarity=0.189 Sum_probs=122.2
Q ss_pred CCcc-cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH-HHHhCCeEEEE
Q 009517 165 HSQG-IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGGTLVPY 242 (533)
Q Consensus 165 ~~~G-~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~-~~~~g~~~~~v 242 (533)
...| +.+..+.+|+.+ | ...-.+++||++.++..++.+++ .+||+|+++..+|-+..+. +.+.|+.++++
T Consensus 171 ~~eG~i~eAq~~AA~~f----g---Ad~tyFlvNGTS~gn~a~i~a~~-~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl 242 (720)
T PRK13578 171 IHEGAAKDAQKHAAKVF----N---ADKTYFVLNGTSASNKVVTNALL-TPGDLVLFDRNNHKSNHHGALIQAGATPVYL 242 (720)
T ss_pred CCChHHHHHHHHHHHHh----C---CCceEEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHHcCCeEEEe
Confidence 3344 345555555554 3 12356889999999999999999 8999999999999998885 88999999998
Q ss_pred ecCCCCCCCC----CH-----HHHHHHHHHHH-h---cCCCeeEEEEeCCCCCCccCCCHHHHHHHHHH-HHHcCCEEEE
Q 009517 243 YLDEATGWGL----ET-----SEVKKQLEAAK-A---KGITVRALVVINPGNPTGQVLAEENQRAIVDF-CKKEGLVLLA 308 (533)
Q Consensus 243 ~~~~~~~~~l----d~-----~~l~~~i~~~~-~---~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l-~~~~~~~lI~ 308 (533)
.... +.|++ +. +.++++|++.. . ..++.++++|++|+. -|+++. +++|+++ ++.++ .|++
T Consensus 243 ~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llv 316 (720)
T PRK13578 243 ETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILF 316 (720)
T ss_pred eccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEE
Confidence 7665 34553 54 44888887641 0 111258999999876 699998 7888887 67777 9999
Q ss_pred cccccc-ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEE
Q 009517 309 DEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEV 365 (533)
Q Consensus 309 De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~ 365 (533)
||+|.. +.|.+.-+..+ ...-+.+. ++.-+++++|.+|.+. ++-- ++++.
T Consensus 317 DEAhgah~~F~p~~~~~p--~~al~~Ga--D~p~i~v~QStHKtL~---alTQaS~LHv 368 (720)
T PRK13578 317 DSAWVGYEQFIPMMADCS--PLLLELNE--NDPGIFVTQSVHKQQA---GFSQTSQIHK 368 (720)
T ss_pred eCcchhhhccCcccccCC--hhhhhcCC--CCCCeEEEEChhhcch---hhhhHhhhhc
Confidence 999965 33432100011 11112221 1234789999999984 5443 44544
No 356
>PLN02452 phosphoserine transaminase
Probab=99.49 E-value=2.3e-11 Score=122.90 Aligned_cols=319 Identities=15% Similarity=0.115 Sum_probs=196.4
Q ss_pred cCCCCHHHHHHHHHHHhcCCCC--CccccCC-CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC
Q 009517 137 QGLFSADSIERAWQILDQIPGR--ATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~--~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 213 (533)
|..+|++|++++.+.+.+..+. +...... ..-..++.+.+.+.+.+.++++-+.+-+++..|++.+++.++..++ .
T Consensus 15 P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~-~ 93 (365)
T PLN02452 15 PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLC-K 93 (365)
T ss_pred CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcC-C
Confidence 3444899999998876432110 1111111 1114566677777777777743333345666889999999999998 6
Q ss_pred CCCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 214 ENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~--~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
+|+++++..-+..+ +...++.+|...+..... ..+| .+++++++. .++.+.|.+++-...||+.+.
T Consensus 94 ~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~v~~~hnETstGv~~~- 163 (365)
T PLN02452 94 PGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGK-DEKYTKIPSVSEWEL--------TPDAKFVHICANETIHGVEFK- 163 (365)
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecC-CCCCCCCCChHHcCC--------CCCCcEEEECCCCCCCcEecC-
Confidence 88887776655444 456777788644433222 2222 356666522 125778888888889999633
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
.++++. ++++|+|.+.+- +..+ .++.. + + ++ +.|..|++ |++| +|.+++ .
T Consensus 164 -~~~~i~------~~~lvVDa~Ss~----g~~p-idv~~----~-----~--v~-~~saqK~l-GP~G--l~~v~v---r 213 (365)
T PLN02452 164 -DYPDVG------NVPLVADMSSNF----LSKP-VDVSK----Y-----G--VI-YAGAQKNV-GPSG--VTIVII---R 213 (365)
T ss_pred -cccccC------CCeEEEECCccc----cCcc-cCHHH----c-----C--EE-EEeccccc-CCCC--eEEEEE---c
Confidence 144443 289999999874 2222 22211 1 2 33 46899999 8898 566666 7
Q ss_pred HHHHHHHHHhh-------------hccccCChHHHHHHHHHcCCCCCCChhHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q 009517 370 AEVREQIYKVA-------------SVNLCSNISGQILASLVMSPPKVGDESYESYCA---ERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 370 ~~~~~~l~~~~-------------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~L 433 (533)
+++++.+.... +...+++....+++..+|+ |+. -++.+.++.+++++++++.|
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~-----------~l~~~gGl~~~~~r~~~~a~~l~~~l 282 (365)
T PLN02452 214 KDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFE-----------DLLAQGGLKAMEKRNIRKADLLYDAI 282 (365)
T ss_pred HHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHH-----------HHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 77776543210 1224667777777777774 222 26788889999999999999
Q ss_pred hcCCCceE--ecC--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--c
Q 009517 434 NSLEGITC--NKA--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--L 507 (533)
Q Consensus 434 ~~~~g~~~--~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~ 507 (533)
++.+|+.. ..+ +..+.+.+.++.. .....| .+.++++|+...+|..- -| -+|+|. +
T Consensus 283 ~~~~G~y~~~~~~~~rs~~~vsF~~~~~------------~~~~~f-~~~~~~~g~~~~~G~r~---~g--g~R~s~yna 344 (365)
T PLN02452 283 DESNGFYVCPVEKSVRSLMNVPFTLGGS------------ELEAEF-VKEAAKAGMVQLKGHRS---VG--GMRASIYNA 344 (365)
T ss_pred HhCCCcccCCCChHHhCCeEEEEEcCCc------------hhHHHH-HHHHHHCCCcccCCccc---cC--ceEEECcCC
Confidence 98767611 111 2333333333311 123444 46678899999998753 22 399999 3
Q ss_pred CCcCcHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~ 525 (533)
.+.++++.+++.|+++-+
T Consensus 345 ~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 345 MPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 787777766666665543
No 357
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.49 E-value=1.1e-11 Score=125.27 Aligned_cols=317 Identities=12% Similarity=-0.022 Sum_probs=193.3
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p 223 (533)
.++++.+.+-. ..++.+. ..++.+.+.+.+.+.++.+-+.+-++++.||+.+++.++..++.++|++|++..
T Consensus 19 ~~~~~~~~~~~-----~~HRs~~--F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g- 90 (374)
T TIGR01365 19 SIEELKNAPLG-----RSHRSKL--GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE- 90 (374)
T ss_pred hHHHHhhhhcc-----cCcCCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-
Confidence 45555444432 3344443 567777777777777774323333567889999999999999833788888865
Q ss_pred cCcch-H-HHHHHhCC-eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 224 QYPLY-S-ASIALHGG-TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 224 ~~~~~-~-~~~~~~g~-~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
.|..- . .+++.+|. .+..+.... +-.+|+++++. . +.|+++|....||+..+ +++++..+
T Consensus 91 ~FG~r~~~eia~~~g~~~v~~l~~~~--g~~~~~~~ve~---~--------~~v~~vhnETSTGv~np---v~~i~~~~- 153 (374)
T TIGR01365 91 SFGKGWVTDVTKQLKLPDVRVLEAEY--GKLPDLKKVDF---K--------NDVVFTWNGTTSGVRVP---NGDFIPAD- 153 (374)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEcCCC--CCCCCHHHcCC---C--------CCEEEecCCCchheecc---cccccccc-
Confidence 55553 4 78888999 477776443 33678998873 1 12667788889999998 44444222
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh-
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV- 379 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~- 379 (533)
++.++|+|.+-+- .+ .+ ..+. . -.+++.|-.|+++++||+ +++++ +++.++.....
T Consensus 154 -~~~lliVDavSs~---g~-~~-l~~d-----------~-iDv~~tgsQK~L~~ppGl--s~v~v---s~~Al~~~~~~~ 210 (374)
T TIGR01365 154 -REGLTICDATSAA---FA-QD-LDYH-----------K-LDVVTFSWQKVLGGEGAH--GMLIL---SPRAVARLESYT 210 (374)
T ss_pred -CCCcEEEEccchh---cC-CC-CChh-----------H-CcEEEEechhccCCCCce--EEEEE---CHHHHHHHhhcC
Confidence 5899999998874 22 22 1111 1 126688889999766664 56665 77776654421
Q ss_pred ---------------------h--hccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Q 009517 380 ---------------------A--SVNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 380 ---------------------~--~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~ 434 (533)
. ++...++....+++..+|. ...+ -++.+.++++++++.+++.++
T Consensus 211 ~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~----------~i~~egGle~~~~Rh~~~a~~l~~~l~ 280 (374)
T TIGR01365 211 PAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALK----------WAESIGGLKPLIARADDNLAVLEAFVA 280 (374)
T ss_pred CCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 0 1222334444444444442 1222 278888999999999999999
Q ss_pred cCCC-ceEecC----CceeEEecccCCCHHHHHHHH-hcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 435 SLEG-ITCNKA----EGAMYLFPRIQLPEKAIKAAE-AEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 435 ~~~g-~~~~~~----~gg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
++ | +.+... .......+.++.+. . +... ..+++-... +...|+++||.+.+|..-- . ...|||+..
T Consensus 281 ~l-g~l~~~~~~~~~rS~tvt~v~~~~~~-~-~~~~~~~~~~~~~~-~~~~l~~~gi~i~~G~~~~--~-~~~fRIg~~G 353 (374)
T TIGR01365 281 KN-NWIHFLAETPEIRSNTSVCLKVVDPA-I-DALDEDAQADFAKE-LISTLEKEGVAYDIGSYRD--A-PSGLRIWCGA 353 (374)
T ss_pred HC-CCcccCCCChhhcCCCeEEEEeCCcc-c-cccccchhhHHHHH-HHHHHHHCCEEEecccccc--C-CCceEEecCC
Confidence 99 6 665542 12222222222110 0 0000 000000122 4566778899999876532 2 248999993
Q ss_pred -CCcCcHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~ 525 (533)
++.++|+.+++.|.=+.+
T Consensus 354 ~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 354 TVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred cCCHHHHHHHHHHHHHHHh
Confidence 899999999999875543
No 358
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.47 E-value=8.2e-11 Score=131.44 Aligned_cols=320 Identities=13% Similarity=0.092 Sum_probs=189.8
Q ss_pred ccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHHHHHHHhc---cCCCC----eEEEcCCcCcch
Q 009517 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVHMMMQLLI---RSEND----GILCPIPQYPLY 228 (533)
Q Consensus 160 ~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~-G~~~al~~~~~~l~---~~~gd----~Vlv~~p~~~~~ 228 (533)
.+-|.| .+|..++...+.+++.+..|. +++-+.. |++++....+.++. ..+|+ +|++++..|...
T Consensus 528 ~hP~qp~e~~qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~sn 603 (954)
T PRK05367 528 LHPFAPAEQAAGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTN 603 (954)
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhh
Confidence 344555 467788888888998888773 3565555 55555434333322 13554 599999999888
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
...+...|.+++.++++.. ..+|+++|++++++. +.++.+|++.+|++-++...+ +++|+++|+++|+++++
T Consensus 604 p~sa~~~G~~vv~v~~d~~--G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~V 675 (954)
T PRK05367 604 PASAVMAGMKVVVVACDEN--GNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYL 675 (954)
T ss_pred HHHHHHCCCEEEEECCCCC--CCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEE
Confidence 8888999999999998753 379999999999752 125788888899876444455 99999999999999999
Q ss_pred ccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC---CeeEEEEEecCCHHHHHHHHHhh-----
Q 009517 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG---KRGGYMEVTGFSAEVREQIYKVA----- 380 (533)
Q Consensus 309 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G---~riG~v~~~~~~~~~~~~l~~~~----- 380 (533)
|.++..... +- ... .++ ..| ++..+.+|+|+.+.| -.+|++.+ .+.+...+....
T Consensus 676 DgA~~~al~-~l---~~p----g~~---GAD---i~~~s~HK~f~~P~G~GGPg~G~l~v---r~~l~p~lpg~~v~~~~ 738 (954)
T PRK05367 676 DGANMNAQV-GL---ARP----GDI---GAD---VSHLNLHKTFCIPHGGGGPGVGPIGV---KAHLAPFLPGHPVQIAG 738 (954)
T ss_pred ECcChhhcc-CC---CCh----hhc---CCC---EEEecCcccCCCCcCCCCCceEEEee---cccccccCCCCccCcCC
Confidence 999963221 11 110 112 234 677889999743222 33777776 444333221110
Q ss_pred --h--ccccCChHHHHHHHH-HcCCCCCCChhHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeE--Ee
Q 009517 381 --S--VNLCSNISGQILASL-VMSPPKVGDESYESY--CAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMY--LF 451 (533)
Q Consensus 381 --~--~~~~~~~~~q~a~~~-~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~--~~ 451 (533)
. .+.+.+..++..+.. +. .|-.. .+.++++.+....+.+++.+.|.+...+.+..+.+-++ ++
T Consensus 739 ~~~~~g~v~ta~~g~al~~~~a~--------~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i 810 (954)
T PRK05367 739 GETGIGAVSAAPFGSASILPISW--------MYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECI 810 (954)
T ss_pred CCCCcCcchhHHHHHHHHHHHHH--------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceE
Confidence 0 111112222211110 10 11001 12244445555578888999887642333333222100 11
Q ss_pred ccc-CCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 452 PRI-QLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 452 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+++ +++.. .+. ....+. +.|.++|+...- ..|. ..+.+||++. .+.++|++++++|..+.++..
T Consensus 811 ~~~~~~~~~-------~g~-~~~di~-krL~d~G~~~~t-~~~p---v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 811 LDLRPLKES-------TGI-TVDDIA-KRLIDYGFHAPT-MSFP---VAGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred EEeeccccc-------CCC-CHHHHH-HHHHHCCCeEee-cCCc---cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 122 11110 011 123444 445778997654 2343 2337899996 788899999999998888766
Q ss_pred H
Q 009517 529 D 529 (533)
Q Consensus 529 ~ 529 (533)
+
T Consensus 878 ~ 878 (954)
T PRK05367 878 E 878 (954)
T ss_pred H
Confidence 5
No 359
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.47 E-value=1e-11 Score=132.82 Aligned_cols=168 Identities=13% Similarity=0.110 Sum_probs=118.1
Q ss_pred CCcc-cHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEE
Q 009517 165 HSQG-IKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPY 242 (533)
Q Consensus 165 ~~~G-~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v 242 (533)
...| +.+..+.+|+.+ | ++ -.+++||++.++..++.+++ .+||+|+++..+|-+..+++.+.|+.++++
T Consensus 192 ~~~G~i~eAe~~AA~~f----g----Ad~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~haLilsga~PVYl 262 (714)
T PRK15400 192 DHSGPHKEAEEYIARVF----N----ADRSYMVTNGTSTANKIVGMYSA-PAGSTVLIDRNCHKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred CCChHHHHHHHHHHHHh----C----CCcEEEEeCchHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 3344 345555555554 3 34 56889999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCCCC----C-----HHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 009517 243 YLDEATGWGL----E-----TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (533)
Q Consensus 243 ~~~~~~~~~l----d-----~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~ 313 (533)
+... +.|++ + .+.++++|+..... +++++++|++|+. -|+++. +++|+++|+.++ |++||+|.
T Consensus 263 ~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwg 334 (714)
T PRK15400 263 RPTR-NAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWV 334 (714)
T ss_pred cccc-cccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccch
Confidence 7654 34543 4 89999999764211 1233788888854 799998 788888888777 68999996
Q ss_pred cc-cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCC
Q 009517 314 EN-VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYG 354 (533)
Q Consensus 314 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~g 354 (533)
.. .|.+.-+..+ .+.... +++..+++++|.+|.+++
T Consensus 335 ah~~F~p~~~~~s--am~~ga---~~~~~i~vtQStHKtL~a 371 (714)
T PRK15400 335 PYTNFSPIYEGKC--GMSGGR---VEGKVIYETQSTHKLLAA 371 (714)
T ss_pred hhhccCcccCCcC--hhhcCC---CCCCceEEEEchhhcccc
Confidence 63 3433211111 111111 233457899999999853
No 360
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.45 E-value=3.5e-11 Score=131.31 Aligned_cols=318 Identities=14% Similarity=0.118 Sum_probs=187.1
Q ss_pred ccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcch
Q 009517 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVHMMMQLLIR------SEN-DGILCPIPQYPLY 228 (533)
Q Consensus 160 ~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~-G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~~ 228 (533)
.+-|.| .+|+.++...+.+++.+..|.+. +-+-. +++.+-...+.++.. +++ ++|+++.-.|+..
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN 604 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN 604 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC
Confidence 366888 88999988889999888877443 33333 344444344444331 122 5788888777655
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
...+...|.+++.++.+++ ..+|+++|++.+++. ..++.+|++.+|++-++. ++.+++|+++|+++|.++++
T Consensus 605 pasa~~~GieVv~Vp~D~~--G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~v 676 (954)
T PRK12566 605 PASAQMAGMRVVIVECDPD--GNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYM 676 (954)
T ss_pred HHHHHHCCCEEEEeccCCC--CCcCHHHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEE
Confidence 6667888999999999853 379999999999732 237888888899875544 35599999999999999999
Q ss_pred ccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC---CeeEEEEEecCCHHHHHHHHHhh-----
Q 009517 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG---KRGGYMEVTGFSAEVREQIYKVA----- 380 (533)
Q Consensus 309 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G---~riG~v~~~~~~~~~~~~l~~~~----- 380 (533)
|.++..-.. + .... .++ ..| |+..++.|+|.++-| .-+|.+.+ .+.+...+...-
T Consensus 677 DgA~~~a~~-~---l~~P----g~~---GAD---i~~~s~HKtf~~P~G~GGP~vG~iav---~~~L~pfLp~~P~~d~~ 739 (954)
T PRK12566 677 DGANLNAQV-G---LARP----ADI---GAD---VSHMNLHKTFCIPHGGGGPGMGPIGV---RAHLAPFVANHPVVPVE 739 (954)
T ss_pred EeeChhhcc-C---CCCh----hhc---CCC---EEEecCCcccCcCccCCCCccchhhh---hhhhhhhccCCCCcCCC
Confidence 998852111 1 1111 122 345 778899998842222 33444433 333333322110
Q ss_pred ------hccccCChHH---HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEe
Q 009517 381 ------SVNLCSNISG---QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLF 451 (533)
Q Consensus 381 ------~~~~~~~~~~---q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~ 451 (533)
..+++....+ ..++...+... .+ + +.+.......+.+++.+.|.+..++.+..+.+-+|--
T Consensus 740 G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~l--------G~-e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hE 809 (954)
T PRK12566 740 GPDPNNGAVSAAPWGSASILPISWMYIAMM--------GP-Q-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHE 809 (954)
T ss_pred CCCCCCCceeecccchHHHHHHHHHHHHHH--------CH-H-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeE
Confidence 0111111111 11122222110 01 1 3444444456778889988764345443322322211
Q ss_pred cccC---CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 452 PRIQ---LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 452 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
+.+. ++.. .+. +...+.++|+ ++||...- ..|. ..+.+||++. .+.++|++++++|..+.++
T Consensus 810 fii~~~~l~~~-------~g~-~~~dvakRL~-d~Gihapt-~~fP---v~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 810 CILDLRPLKAQ-------TGI-SEEDVAKRLM-DYGFHAPT-MSFP---VPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred EEEEccccccc-------cCC-CHHHHHHHHH-HCCcEEeE-Eeec---cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 1122 2210 112 2344555555 88987543 3342 2448999996 7888999999999998887
Q ss_pred HHH
Q 009517 527 FMD 529 (533)
Q Consensus 527 ~~~ 529 (533)
..+
T Consensus 877 ~~~ 879 (954)
T PRK12566 877 IGK 879 (954)
T ss_pred HHH
Confidence 653
No 361
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.44 E-value=1.9e-10 Score=126.48 Aligned_cols=319 Identities=14% Similarity=0.089 Sum_probs=188.7
Q ss_pred ccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCE-EEcCChHHHHHHHHHHhcc-------CCCCeEEEcCCcCcch
Q 009517 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDI-FLTDGASPAVHMMMQLLIR-------SENDGILCPIPQYPLY 228 (533)
Q Consensus 160 ~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i-~~t~G~~~al~~~~~~l~~-------~~gd~Vlv~~p~~~~~ 228 (533)
.+-|.| .+|..++...+.+++.+..|.+ ++ +..+|++++-.+.+.++.. ...++|+++.-.+...
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd----~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD----AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC----CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC
Confidence 455665 3678888888888888887744 33 3334455544434433331 1235799999888777
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
...+...|.+++.++.++ +..+|+++|+++++++ +.++++|++++|+| +|++-+ .+++|+++|+++|.++++
T Consensus 592 Pasa~~~G~~Vv~V~~d~--~G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~V 663 (939)
T TIGR00461 592 PASAAMAGMQVVPVNCDQ--DGNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYL 663 (939)
T ss_pred HHHHHHCCCEEEEeccCC--CCCcCHHHHHHHHhhc---CCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEE
Confidence 778899999999999874 3489999999999852 34799999999999 787642 399999999999999999
Q ss_pred ccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC---CCeeEEEEEecCCHHHHHHHHHh------
Q 009517 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC---GKRGGYMEVTGFSAEVREQIYKV------ 379 (533)
Q Consensus 309 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~---G~riG~v~~~~~~~~~~~~l~~~------ 379 (533)
|.++..-.. +- ... .++ .-| +++.|.+|+|+++. |--+|++.+ .+++...+-..
T Consensus 664 DgAq~~al~-~l---~~P----g~~---GaD---i~~~s~HKtf~~P~G~GGPg~G~i~v---r~~L~~~lPg~~v~~t~ 726 (939)
T TIGR00461 664 DGANMNAQV-GL---TSP----GDL---GAD---VCHLNLHKTFCIPHGGGGPGMGPIGV---KSHLIPFLPKHDVVSMI 726 (939)
T ss_pred EecChhhCC-CC---CCc----ccc---CCC---EEEecCCccCCCCCCCCCCCeEEEEE---hhhchhhcCCCcccccc
Confidence 999854111 10 000 111 234 77889999886232 345788877 44443332100
Q ss_pred ------h--hccc--cCCh----HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC-
Q 009517 380 ------A--SVNL--CSNI----SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA- 444 (533)
Q Consensus 380 ------~--~~~~--~~~~----~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~- 444 (533)
+ ...+ +.+. +...+-..+|. .+-++++.+....+.+++.+.|++. +++.-+
T Consensus 727 d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG------------~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~ 792 (939)
T TIGR00461 727 TGIGGSKSIGSVSAAPYGSASILPISWMYIKMMG------------NEGLPKASVVAILNANYMATRLKDH--YPILFVG 792 (939)
T ss_pred cCCCCccccccccccccCcHHHHHHHHHHHHHHC------------HHHHHHHHHHHHHHHHHHHHHhhcc--CcccccC
Confidence 0 0001 1111 11111111221 1335566666777888999999863 333222
Q ss_pred Ccee-EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 445 EGAM-YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 445 ~gg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
..+. +-=+-++.+.. . +..|. ...+.. +.|.++|+..-. ..|. ..+.-.||.+-..+.++||++++++.++
T Consensus 793 ~~~~~~hEfv~~~~~~--~--~~~g~-~~~dIa-krL~d~G~hapt-~~~p-v~g~lmiepTE~eskeelD~f~~al~~I 864 (939)
T TIGR00461 793 TLKHVAHECILDLRPL--K--AKTGI-EAIDVA-KRLQDYGFHAPT-LSFP-VPGTLMVEPTESESLEELDRFCDAMIAI 864 (939)
T ss_pred CCCceeEEEEEeccch--h--hhcCC-CHHHHH-HHHHhCCeeccc-cCCc-cCCeEEEEeeccCCHHHHHHHHHHHHHH
Confidence 1222 11011222210 0 01122 234444 455678986433 3343 2332244444457888999999999887
Q ss_pred HHHHHH
Q 009517 524 HKNFMD 529 (533)
Q Consensus 524 l~~~~~ 529 (533)
.++..+
T Consensus 865 ~~e~~~ 870 (939)
T TIGR00461 865 KEEINA 870 (939)
T ss_pred HHHHHH
Confidence 776654
No 362
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.43 E-value=1.3e-10 Score=124.51 Aligned_cols=171 Identities=11% Similarity=0.060 Sum_probs=118.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA 247 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~ 247 (533)
+.+..+.+|+.++ ++ -.+++||++.++..++.+++ .+||+|+++..+|-+..+.+.+.|+.+++++...
T Consensus 197 i~eAe~~aA~~fg--------Ad~tyfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~- 266 (713)
T PRK15399 197 HLEAEEYIARTFG--------AEQSYIVTNGTSTSNKIVGMYAA-PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR- 266 (713)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEeCChHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-
Confidence 3455555555543 33 56889999999999999998 8999999999999999999999999999987554
Q ss_pred CCCC----CCH-----HHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEccccccc-c
Q 009517 248 TGWG----LET-----SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL-LADEVYQEN-V 316 (533)
Q Consensus 248 ~~~~----ld~-----~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~l-I~De~y~~~-~ 316 (533)
+.|+ ++. +.++++|++.... +++++++|++|+. -|++++ +++|+++| |+.+ ++||+|... .
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~ 338 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTH 338 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhh
Confidence 3444 345 8899999874211 2346888889854 799998 66677777 5655 699999653 3
Q ss_pred ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEE
Q 009517 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEV 365 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~ 365 (533)
|.+. +.+...+. ... .+|..+++++|.+|++. |+.- +++++
T Consensus 339 F~p~--~~~~sam~-~~~--~aD~~i~~tQStHKtL~---alTQaS~iHv 380 (713)
T PRK15399 339 FHPI--YQGKSGMS-GER--VPGKVIFETQSTHKMLA---AFSQASLIHI 380 (713)
T ss_pred cCcc--cCCcChhh-CCC--CCCeeeeeeeehhcccc---ccchheeeee
Confidence 4321 11111111 100 24555778999999984 5443 44544
No 363
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.43 E-value=7.7e-11 Score=117.83 Aligned_cols=319 Identities=15% Similarity=0.184 Sum_probs=193.1
Q ss_pred cCCCCHHHHHHHHHHHhcCCC--CC---ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc
Q 009517 137 QGLFSADSIERAWQILDQIPG--RA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~--~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 211 (533)
|..+|++|++++.+.+.+..+ .+ ..+..+. ..++.+.+.+.+.+.++++-+.+=+++..|++.+++.+...++
T Consensus 12 Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~--F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll 89 (364)
T PRK12462 12 PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSW--FSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFS 89 (364)
T ss_pred CcCCCHHHHHHHHHHHhcccccCccccccccccHH--HHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcC
Confidence 445599999999988765322 11 1222222 4666677777777777754333334555669999999999998
Q ss_pred cCCCCeEE--EcCCcCcc-hHHHHHHhCCeEEEEecCCCCCC--CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 212 RSENDGIL--CPIPQYPL-YSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 212 ~~~gd~Vl--v~~p~~~~-~~~~~~~~g~~~~~v~~~~~~~~--~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
.+|++++ +.+..|.. +...++.+| .+..+......+| .++++.++ +. ++.+.|.+++-...||+.
T Consensus 90 -~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~------~d~~~v~~t~NETstGv~ 159 (364)
T PRK12462 90 -RPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WD------ARAPFRHYVSNETVEGLQ 159 (364)
T ss_pred -CCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cC------CCCcEEEEccCCCCceEe
Confidence 7888654 55666654 445566666 4444432222222 34566541 11 256778888888889998
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
.+ ++.+.++.++|+|.+-+-+ + .+ ..+.. -| ++..+..|++ |+||+- .+++
T Consensus 160 ~~--------~~~~~~~~llvvD~sS~~~---s-~p-id~~~---------~d---vi~agsQKnl-gP~Glt--vviv- 210 (364)
T PRK12462 160 FP--------DAAGLPDSPLIADMSSDFM---S-RP-FDVEA---------YG---MVYAHAQKNL-GPAGVT--VAII- 210 (364)
T ss_pred cC--------cccccCCCeEEEEcCchhh---C-CC-CChHH---------cc---EEEeeccccC-CCCceE--EEEE-
Confidence 86 2333468999999888742 2 22 12111 13 6677889999 788864 4444
Q ss_pred cCCHHHHHHHHHh-----------h--hccccCChHHHHHHHHHcCCCCCCChhHHHHH--H--HHHHHHHHHHHHHHHH
Q 009517 367 GFSAEVREQIYKV-----------A--SVNLCSNISGQILASLVMSPPKVGDESYESYC--A--ERDGILSSLARRAKTL 429 (533)
Q Consensus 367 ~~~~~~~~~l~~~-----------~--~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~l 429 (533)
.++.++..... . ++..+|+....+++..+|+ |+ + -++.+.++.+++++.+
T Consensus 211 --s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~-----------~i~~e~GGl~~~~~r~~~ka~~l 277 (364)
T PRK12462 211 --RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR-----------WIRDEIGGVHAMRDINARKAAML 277 (364)
T ss_pred --CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH-----------HHHHhccCHHHHHHHHHHHHHHH
Confidence 77776554321 1 1334566777777777764 22 2 3567788888999999
Q ss_pred HHHHhcCCCceEec----CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEE
Q 009517 430 EDAFNSLEGITCNK----AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCT 505 (533)
Q Consensus 430 ~~~L~~~~g~~~~~----~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis 505 (533)
++.+++.+|+.... .+.-|.+.+++..+. .+..|+ +.++++|+.-.-|.. .-| .+|+|
T Consensus 278 y~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~------------l~~~f~-~~a~~~gl~~lkGhr---~vg--g~Ras 339 (364)
T PRK12462 278 YATLDALNEVIDCHAHRAARSTMNVAFRFRQPR------------LDTLFK-EQSTEAGFCGLSGHR---SIG--GIRAS 339 (364)
T ss_pred HHHHHhCCCcccCCCChhhcCcceEEEEcCCHH------------HHHHHH-HHHHHCCCccccCCc---ccC--ceEEE
Confidence 99999986544321 234455554433221 134444 556788988776543 222 59999
Q ss_pred e--cCCcCcHHHHHHHHHHHHHHHHHHh
Q 009517 506 I--LPQEDKIPAIVTRLTDFHKNFMDKF 531 (533)
Q Consensus 506 ~--~~~~e~i~~~~~~l~~~l~~~~~~~ 531 (533)
+ +.+.|.++ +|.++++++.+++
T Consensus 340 ~yna~~~e~v~----~L~~fm~~f~~~~ 363 (364)
T PRK12462 340 LYNAVSEQAVS----RLCAFLKDFAIRH 363 (364)
T ss_pred cCCCCCHHHHH----HHHHHHHHHHHhc
Confidence 9 47766654 5555555555443
No 364
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=3.9e-11 Score=117.70 Aligned_cols=299 Identities=14% Similarity=0.118 Sum_probs=187.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 248 (533)
..++.+.+|++++ .++-+++..| -......+-.++ .+|.-|+-.+-.+.....-++.-|++++.+..+
T Consensus 184 hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~-~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN--- 251 (519)
T KOG1357|consen 184 HKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLL-GKGSLIISDELNHASLITGARLSGATTRVFRHN--- 251 (519)
T ss_pred HHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceee-cCCcceeeccccchheeccccccCceEEEEecC---
Confidence 4556666666654 2455666665 344455566677 788888888888988888899999999888765
Q ss_pred CCCCCHHHHHHHHHHHHhcCC-C----e-eEEEE-eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCC
Q 009517 249 GWGLETSEVKKQLEAAKAKGI-T----V-RALVV-INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~-~----~-~~iil-~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~ 321 (533)
|.++||+.|+++-..|. + - +.+++ ...-..-|.+.. +.+++++++++..+++.||+++..+.+...
T Consensus 252 ----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~tG 324 (519)
T KOG1357|consen 252 ----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGATG 324 (519)
T ss_pred ----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCCC
Confidence 68888888887644342 1 1 22333 355556677765 899999999999999999999875542111
Q ss_pred CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh----ccccCChHHHHHHHHH
Q 009517 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS----VNLCSNISGQILASLV 397 (533)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~----~~~~~~~~~q~a~~~~ 397 (533)
.-+.++.+.++.+..|..++|+|.+ |..| ||+.+ ++++++.++.... .++.++++.|.....+
T Consensus 325 ------rgvce~~g~d~~dvDImMGtftKSf-ga~G---Gyiag---sk~lid~lrt~s~~~~yat~~sppvaqq~~ssl 391 (519)
T KOG1357|consen 325 ------RGVCEYFGVDPEDVDIMMGTFTKSF-GAAG---GYIAG---SKELIDYLRTPSPSALYATSLSPPVAQQILTSV 391 (519)
T ss_pred ------cceeeccCCCchhheeecceehhhc-cccc---ceecC---cHHHHhhhccCCCceeecccCChHHHHHHHHHH
Confidence 1123333334555568899999998 4344 88887 9999988765321 3355666666655443
Q ss_pred cC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCce----eEEecccCCCHHHHHHHHhcCCCCh
Q 009517 398 MS-PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGA----MYLFPRIQLPEKAIKAAEAEKTVPD 472 (533)
Q Consensus 398 L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg----~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (533)
.- .+++ .....++..+++.+++.+++..|... |+-+...+.. +.++ .|.+ -
T Consensus 392 ~~i~G~d-------gt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~----~~~k------------~ 447 (519)
T KOG1357|consen 392 KHIMGED-------GTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLY----GPAK------------I 447 (519)
T ss_pred HhhcCCC-------cccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeec----Cccc------------c
Confidence 21 1111 11223556677888888999999887 7766554433 2222 1111 1
Q ss_pred HHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHH
Q 009517 473 AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 473 ~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l 524 (533)
..+-+++| +++|.++-+..-..+--...+|++. .++.|+++.+++.+.++=
T Consensus 448 ~~f~r~~l-~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 448 VAFSREML-ERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred cHHHHHHH-hcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 23333444 4555554332221111122456666 388899999998887754
No 365
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.32 E-value=1.5e-09 Score=110.31 Aligned_cols=279 Identities=14% Similarity=0.085 Sum_probs=174.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCC-----CCCEEEcCChHHHHHHHHHHhcc---
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIR--- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~--- 212 (533)
+..++..+....-+. ....|.-.....++.+.+.+++.+.+|.+-. .-.=++|+|+++++..++.+.+.
T Consensus 52 ~~~i~~~~l~~~~n~---n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~ 128 (373)
T PF00282_consen 52 PASILADLLASALNQ---NGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERAL 128 (373)
T ss_dssp HHHHHHHHHHHHHT----BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcc---cccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHh
Confidence 455555554433332 2334444445788999999999999886621 12458899999999988876641
Q ss_pred ----CCC-----C-eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC
Q 009517 213 ----SEN-----D-GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (533)
Q Consensus 213 ----~~g-----d-~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP 282 (533)
..| + .|++++-+|.....++..+|..++.||+++ ++.+|+++|+++|.+...+|..+-+|+.+-....
T Consensus 129 ~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~ 206 (373)
T PF00282_consen 129 PRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTN 206 (373)
T ss_dssp HHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TT
T ss_pred hhhhhcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcc
Confidence 011 2 466777788899999999999999999997 5689999999999987666644445666677888
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE
Q 009517 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY-VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (533)
Q Consensus 283 tG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG 361 (533)
||.+= .+++|+++|+++++|+.+|.+|.+..+ ... .. .+...+ +...-| ..+++|.+ + .-+..|
T Consensus 207 ~Ga~D---~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~--~~---~~~~gi----~~adSi-t~d~HK~l-~-~P~~~~ 271 (373)
T PF00282_consen 207 TGAID---PLEEIADICEKYNIWLHVDAAYGGSALLSPE--YR---HLLFGI----ERADSI-TIDPHKWL-G-VPYGCG 271 (373)
T ss_dssp TSBB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT--TG---GGGTTG----GGESEE-EEETTTTT-S--SSS-E
T ss_pred ccccc---CHHHHhhhccccceeeeeccccccccccccc--cc---cccccc----cccccc-ccchhhhh-c-CCccce
Confidence 99984 499999999999999999999998433 121 11 122222 121223 45789987 4 457888
Q ss_pred EEEEecCCHHHHHHHHHh-----h-------------hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHH
Q 009517 362 YMEVTGFSAEVREQIYKV-----A-------------SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (533)
Q Consensus 362 ~v~~~~~~~~~~~~l~~~-----~-------------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (533)
+++. .++......... . ..+...+. ...++..++. ....-.+.++++.++..
T Consensus 272 ~~l~--r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~-------l~~~G~~G~~~~i~~~~ 341 (373)
T PF00282_consen 272 VLLV--RDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWAT-------LKSLGREGYRERIRRCI 341 (373)
T ss_dssp EEEE--SSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHH-------HHHHHHHHHHHHHHHHH
T ss_pred eEEe--ecccchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHH-------HHhcCHHHHHHHHHHHH
Confidence 8887 354443321100 0 01112233 3333333321 00012244566777778
Q ss_pred HHHHHHHHHHhcCCCceEec-CCceeE
Q 009517 424 RRAKTLEDAFNSLEGITCNK-AEGAMY 449 (533)
Q Consensus 424 ~~~~~l~~~L~~~~g~~~~~-~~gg~~ 449 (533)
+..+++.+.|++.+++.++. |.-+..
T Consensus 342 ~~a~~l~~~l~~~~~~el~~~~~~~~v 368 (373)
T PF00282_consen 342 ELARYLADRLRKDPRFELVNEPDLNIV 368 (373)
T ss_dssp HHHHHHHHHHHTSTTEEESSTTSSSEE
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCceEE
Confidence 88889999999988888764 444443
No 366
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.31 E-value=3e-09 Score=107.03 Aligned_cols=327 Identities=17% Similarity=0.165 Sum_probs=194.8
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC-------cCcc-hHHHH
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-------QYPL-YSASI 232 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-------~~~~-~~~~~ 232 (533)
..|........|.+.++++++ .+.++.|..+..+-.++++.++..+|+++++..+ .+.. ....+
T Consensus 68 D~Y~gdpSv~~Lee~vael~G--------~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a 139 (467)
T TIGR02617 68 EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHS 139 (467)
T ss_pred cccccCchHHHHHHHHHHHhC--------CceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHH
Confidence 458777668999999999975 4568889888888888989888337887775443 2222 23456
Q ss_pred HHhCCeEEEEecCC--------CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC-CCccCCCHHHHHHHHHHHHHcC
Q 009517 233 ALHGGTLVPYYLDE--------ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 233 ~~~g~~~~~v~~~~--------~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N-PtG~~~s~~~l~~i~~l~~~~~ 303 (533)
...|+.++.++.++ .....+|++.|+++|++... .+...+.+.--+| -.|.++|.+.++++.++|++||
T Consensus 140 ~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~G 217 (467)
T TIGR02617 140 QINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYD 217 (467)
T ss_pred HHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcC
Confidence 77888888764331 11236899999999987411 1233332222233 3588999999999999999999
Q ss_pred CEEEEcccccc--ccc----cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH---HHHH
Q 009517 304 LVLLADEVYQE--NVY----VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA---EVRE 374 (533)
Q Consensus 304 ~~lI~De~y~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~---~~~~ 374 (533)
+.++.|.+--. -+| .......++..++.++.. .-| .+..|+||.+ |.++|-+++.. ++ ++.+
T Consensus 218 IplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~-~aD---svt~slsKgl----gApvGg~Lag~-d~~~~~l~~ 288 (467)
T TIGR02617 218 IPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK-YAD---MLAMSAKKDA----MVPMGGLLCFK-DDSFFDVYT 288 (467)
T ss_pred CcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc-cCC---EEEEEcCCCC----CCcccceEEec-chhHHHHHH
Confidence 99999975311 111 001123456666655532 234 4467999976 67877776643 45 4444
Q ss_pred HHHHhh----h-ccc-cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcee
Q 009517 375 QIYKVA----S-VNL-CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAM 448 (533)
Q Consensus 375 ~l~~~~----~-~~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~ 448 (533)
+++... . .++ +.+.--..+++.-|.+.. - ....+.=....++|.+.|.+. |+.++. .||.
T Consensus 289 ~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~-----~-------~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Ggh 354 (467)
T TIGR02617 289 ECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM-----N-------LDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGH 354 (467)
T ss_pred HHHhhcccccCCcCcCchhHHHHHHHHhhhhhcc-----c-------HHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCcc
Confidence 444322 1 122 223333333333343211 0 111111123356888899887 998888 8888
Q ss_pred EEecccC--CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-CCC-CCCC--CC------CceEEEEec---CCcCcH
Q 009517 449 YLFPRIQ--LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-GSG-FGQV--PG------TWHFRCTIL---PQEDKI 513 (533)
Q Consensus 449 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g~~-f~~~--~g------~~~iRis~~---~~~e~i 513 (533)
-++++.. +|.-- .... ....++.++-.+.||--.- |+. ++.. .+ -..+|+++. -|.+.+
T Consensus 355 av~iDa~~~lphip-----~~~f-pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~ 428 (467)
T TIGR02617 355 AAFVDAGKLLPHIP-----ADQF-PAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHM 428 (467)
T ss_pred EEEEehhhhCCCCC-----hhhC-cHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHH
Confidence 8876532 11100 0011 2333455666778875332 332 1111 11 137999993 678889
Q ss_pred HHHHHHHHHHHHH
Q 009517 514 PAIVTRLTDFHKN 526 (533)
Q Consensus 514 ~~~~~~l~~~l~~ 526 (533)
+..++++..+.++
T Consensus 429 d~v~~~~~~~~~~ 441 (467)
T TIGR02617 429 DFIIEAFKHVKEN 441 (467)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887764
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.27 E-value=2.3e-09 Score=119.50 Aligned_cols=304 Identities=13% Similarity=0.079 Sum_probs=182.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCC--cc----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHS--QG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~--~G----~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 214 (533)
|..+.+++.+...-.. ..+.|.+. +| +.++++.++++++ .+++++-++.+++.+.+.++.++...+
T Consensus 118 P~~v~~~i~~~~~~~T--aytPYqaEisQG~lqal~~~Qt~ia~LtG------~~~anaSL~d~aTAaaea~~~a~~~~~ 189 (993)
T PLN02414 118 PPVILRNILENPGWYT--QYTPYQAEIAQGRLESLLNYQTMITDLTG------LPMSNASLLDEGTAAAEAMAMCNNILK 189 (993)
T ss_pred CHHHHHHHHhChHHHh--hcCCCchHHHHHHHHHHHHHHHHHHHHhC------CChhhEeecCChHHHHHHHHHHHhccc
Confidence 6666677776554321 24455553 45 4456666666664 778999999999999998887764344
Q ss_pred C--CeEEEcCCcCcchHHHHH----HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 215 N--DGILCPIPQYPLYSASIA----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 215 g--d~Vlv~~p~~~~~~~~~~----~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
| ++|++++-.|+.+...++ ..|++++.++.+.. + ...+ .+.++++.+|+ -+|.+.+
T Consensus 190 g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~------~v~~vlvq~P~-~~G~v~d 251 (993)
T PLN02414 190 GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSG------DVCGVLVQYPA-TDGEVLD 251 (993)
T ss_pred CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccC------ceEEEEEecCC-CCeEEcC
Confidence 4 789999999998776554 35889988886421 1 0111 34455544554 4899987
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCC---CCCeeEEEEE
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE---CGKRGGYMEV 365 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl---~G~riG~v~~ 365 (533)
+++|+++|+++|+++++ .+..- ...+ ..+. .++ ..| |++++-.|.. +. .|-+.|++.+
T Consensus 252 ---v~~I~~~ah~~GaL~iV-aad~l-al~~---l~~p----ge~---GAD---i~vgsgqKwg-~P~G~GGP~aGflav 312 (993)
T PLN02414 252 ---YAEFVKNAHANGVKVVM-ATDLL-ALTM---LKPP----GEW---GAD---IVVGSAQRFG-VPMGYGGPHAAFLAT 312 (993)
T ss_pred ---HHHHHHHHHHcCCEEEE-EECHH-HhcC---CCCH----hhc---cCc---EEEECCCccc-cCCCCCCCCeeEEEE
Confidence 99999999999999999 33221 1111 1111 122 244 7788888864 22 2445899988
Q ss_pred ecCCHHHHHHHH-Hhhh------------------------ccccCChHHHHHHHHHcCCCCCCChhHHHH--HHHHHHH
Q 009517 366 TGFSAEVREQIY-KVAS------------------------VNLCSNISGQILASLVMSPPKVGDESYESY--CAERDGI 418 (533)
Q Consensus 366 ~~~~~~~~~~l~-~~~~------------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~--~~~~~~~ 418 (533)
.+++...+- ++-. ...+.|..+..++.+.+. ..|..+ ..-++++
T Consensus 313 ---r~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la------~~y~~~~g~~Gl~~I 383 (993)
T PLN02414 313 ---SQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMA------AMYAVYHGPEGLKTI 383 (993)
T ss_pred ---CHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHH------HHHHHHhccccHHHH
Confidence 666655432 1100 011223322222222221 011111 0225667
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
.++..++..++.+.|.+. |+++..+ .+|-.+.+..+ +... +.+.|.++||.+..- .
T Consensus 384 a~ri~~la~~l~~~L~~~-G~~~~~~--~~f~~vt~~~~-------------~~~~-v~~~L~~~gI~l~~~-------~ 439 (993)
T PLN02414 384 AQRVHGLAGVFAAGLKKL-GFQVQSL--PFFDTVKVKCS-------------DADA-IADAAAKVGINLRVV-------D 439 (993)
T ss_pred HHHHHHHHHHHHHHHhhc-CCccCCC--CCcCeEEEecC-------------CHHH-HHHHHHHCCCeeEEe-------c
Confidence 778888888999999876 7776543 22222212322 1233 335567789977631 1
Q ss_pred CceEEEEec--CCcCcHHHHHHHHHH
Q 009517 499 TWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 499 ~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
.+.+|+|+. .++++|+.+++.|..
T Consensus 440 ~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 440 ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 227999996 888999999999963
No 368
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.26 E-value=2e-09 Score=111.05 Aligned_cols=166 Identities=20% Similarity=0.212 Sum_probs=124.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA 247 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~ 247 (533)
..+..+.+|+.++ ++ ..+++||++.++..++.+++ .+||+|+++.+++-+....+.+.|+.++++.....
T Consensus 72 i~eAqe~aA~~fg--------Ad~tyFvvNGTS~ank~vi~a~~-~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~n 142 (557)
T COG1982 72 IKEAQELAARVFG--------ADHTYFVVNGTSTANKAVINAVL-TPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRN 142 (557)
T ss_pred HHHHHHHHHHHhC--------CCceEEEECCccHHHHHHHHhhc-CCCCEEEecCCccHHHHHHHHHcCCceEEecCCCC
Confidence 4566666666653 33 57889999999999999999 89999999999999999999999999998877665
Q ss_pred CCCC----CCHHHHHHHHHHHHhcCCCe-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-cccCCC
Q 009517 248 TGWG----LETSEVKKQLEAAKAKGITV-RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN-VYVPEK 321 (533)
Q Consensus 248 ~~~~----ld~~~l~~~i~~~~~~g~~~-~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~-~~~~~~ 321 (533)
..|+ ++.+.+++++.++. .. |++++++|.. -|+++. +++|++++...++|+..||+.... .+.+.
T Consensus 143 p~~gi~ggI~~~~~~~~l~~~~----~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~- 213 (557)
T COG1982 143 PLYGIIGGIPLETFKEALLAHP----DAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPM- 213 (557)
T ss_pred ccccccCCCCHHHHHHHHHhCh----hhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccccccccc-
Confidence 5444 69999999887742 44 7888888875 699998 888899999999999999998542 12221
Q ss_pred CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE-EEEE
Q 009517 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG-YMEV 365 (533)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG-~v~~ 365 (533)
... .. ..+..+++.+|..|.++ ++.-+ ++..
T Consensus 214 -l~~---~~------~~~~~~~~tqS~HK~l~---alSQaS~iHv 245 (557)
T COG1982 214 -LPE---SA------LNGGADFVTQSTHKLLA---ALSQASMIHV 245 (557)
T ss_pred -Ccc---hh------hhcCceEEEechhhhhh---hhhhhHHHhh
Confidence 111 11 12345789999999873 55543 4443
No 369
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.19 E-value=1e-08 Score=114.83 Aligned_cols=282 Identities=17% Similarity=0.164 Sum_probs=171.0
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC--CeEEEcCCcCcchHHHH----HHhCCeE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSASI----ALHGGTL 239 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~p~~~~~~~~~----~~~g~~~ 239 (533)
.+|..+..-.+...+.+..| .+..++-+..+++++.+.++.++...++ ++|++++-.|+.....+ +..|.++
T Consensus 116 sQG~Leal~~~Qt~la~LtG--~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev 193 (954)
T PRK05367 116 SQGRLEALLNFQTMVADLTG--LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEV 193 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHC--CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEE
Confidence 44544433333333333334 6788999999999999988877643443 89999999999877554 5579999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccC
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~ 319 (533)
+.++.+.+ ++ .+ ++.++++.+| |-+|.+.+ +++|+++|+++|+++++|.....+.. .
T Consensus 194 ~~~~~~~d----~~--------~~------~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~-l 250 (954)
T PRK05367 194 VVGDAAKA----LD--------HD------DVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTL-L 250 (954)
T ss_pred EEecCccC----CC--------cc------cEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccC-C
Confidence 99987531 11 11 4666666676 56999987 99999999999999999864422211 1
Q ss_pred CCCcccHHHHHhhcCCCCCCceEEEEecCCcc-----CCCCCCCeeEEEEEecCCHHHHHHHHHh-hh------------
Q 009517 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKG-----YYGECGKRGGYMEVTGFSAEVREQIYKV-AS------------ 381 (533)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~-----~~gl~G~riG~v~~~~~~~~~~~~l~~~-~~------------ 381 (533)
. +. .++ ..| |++++..|. + | |--.|++.+ .+++...+... ..
T Consensus 251 ~----~p----ge~---GaD---i~vgs~qkfg~P~g~-G--GP~aGflav---r~~~~r~lpgrivG~s~d~~g~~~~~ 310 (954)
T PRK05367 251 T----PP----GEM---GAD---IAVGSAQRFGVPMGF-G--GPHAAYFAV---RDAYKRSMPGRIVGVSVDAAGNPALR 310 (954)
T ss_pred C----Ch----hhc---CCC---EEEeeCcccCCCCCC-C--CCCEEEEEE---CHHHHhhCCCCeeeeecccCCCcccc
Confidence 1 11 222 245 778888886 4 2 334889888 67766555211 00
Q ss_pred ------------ccccCChHHHHHHHHHcCCCCCCChhHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCce
Q 009517 382 ------------VNLCSNISGQILASLVMSPPKVGDESYESY--CAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGA 447 (533)
Q Consensus 382 ------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg 447 (533)
...++|.....++.+++. ..|..+ ..-++++.++...+..++.+.|++. |+++..+ .
T Consensus 311 lalqtReqhiRrekaTsNict~qaL~a~~a------~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~--~ 381 (954)
T PRK05367 311 LALQTREQHIRREKATSNICTAQVLLAVMA------SMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHD--S 381 (954)
T ss_pred cccccccccccccccccccchHHHHHHHHH------HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCC--C
Confidence 001112211111111110 011111 1236777788888889999999875 8775433 2
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
+|-.+.+..+. +.... .+.|.++||.+.. ...+.+|||+. .++++|+.+++.|.
T Consensus 382 ~f~~~~~~~~~------------~~~~i-~~~l~~~gi~~~~-------~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 382 FFDTLTVEVGG------------DAAAV-LARALAAGINLRR-------VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred CCCeEEEeCCC------------CHHHH-HHHHHHCCceecc-------ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 22222222221 12333 3556678998842 11227999996 78889999999996
No 370
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.17 E-value=7.7e-11 Score=103.36 Aligned_cols=65 Identities=26% Similarity=0.461 Sum_probs=61.0
Q ss_pred ccCCCcccHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc
Q 009517 162 AYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL 227 (533)
Q Consensus 162 ~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~ 227 (533)
.|++..|.++||+++|+|+.+++| +.+++++|++|+|+++++..++.+++ ++||.|++++|+|++
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~-dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA-DPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc-CCCCEEEEeCCCCCC
Confidence 489999999999999999999988 67889999999999999999999999 899999999999974
No 371
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.15 E-value=7.2e-08 Score=93.45 Aligned_cols=175 Identities=19% Similarity=0.239 Sum_probs=115.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchHHHH----------HHhCC
Q 009517 172 LRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASI----------ALHGG 237 (533)
Q Consensus 172 lr~aia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~~~~----------~~~g~ 237 (533)
=|+.+-+.+.+.+| .|.-++ .-++|+|+..++..++ .|||+++... .-|-.....+ +..|.
T Consensus 55 GRd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~L-rpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi 129 (403)
T PF06838_consen 55 GRDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVL-RPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGI 129 (403)
T ss_dssp HHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-
T ss_pred cHHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcC-CCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCc
Confidence 35555555555545 343333 2368899999999999 8999988644 3344444443 55778
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccc
Q 009517 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQE 314 (533)
Q Consensus 238 ~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~--~~~lI~De~y~~ 314 (533)
+...+++.+++ .+|.+.+++++++ ++|+|++. +-..-+=-.++.++++++++++++. ++++++|.+|.+
T Consensus 130 ~Y~~v~L~~dg--~~D~~~i~~~~~~------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGE 201 (403)
T PF06838_consen 130 KYREVPLTEDG--TIDWEAIKKALKP------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGE 201 (403)
T ss_dssp EEEE--B-TTS--SB-HHHHHHHHHT------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTT
T ss_pred eeEEEeecCCC--CcCHHHHHHhhcc------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcce
Confidence 89999998754 7899999999997 89999998 6666666679999999999999975 799999999999
Q ss_pred ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC--eeEEEEEecCCHHHHHHHHHh
Q 009517 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK--RGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~--riG~v~~~~~~~~~~~~l~~~ 379 (533)
|.-.-+ | .++ ..| ++++|+=|+.+ .|+ -.||+++ .+++++.....
T Consensus 202 FvE~~E-P--------~~v---GAD---l~aGSLIKNpG--GgiAptGGYIaG---r~~lVe~~a~R 248 (403)
T PF06838_consen 202 FVETQE-P--------TEV---GAD---LMAGSLIKNPG--GGIAPTGGYIAG---RKDLVERAAYR 248 (403)
T ss_dssp TTSSS--G--------GGG---T-S---EEEEETTSGGG--TTT-SS-EEEEE---SHHHHHHHHHH
T ss_pred eccccC-c--------ccc---chh---heeccceeCCC--CCccCcCCEEec---hHHHHHHHHhh
Confidence 664322 1 122 345 88999999984 353 4799998 99999887643
No 372
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.05 E-value=2.4e-07 Score=88.97 Aligned_cols=328 Identities=19% Similarity=0.231 Sum_probs=202.2
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc----CCCCeEEEcCCcCcchH-HHHHH
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----SENDGILCPIPQYPLYS-ASIAL 234 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~~gd~Vlv~~p~~~~~~-~~~~~ 234 (533)
...|.-+.++..|.+++.+.++ .+.++.|.-+..|-.+++..+++ .||.+..+++..|.... .-.+.
T Consensus 72 DEAYagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ 143 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQI 143 (471)
T ss_pred chhhcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHh
Confidence 4568888889999999988864 36678888777776766666652 25555666666666543 34566
Q ss_pred hCCeEEEEecCCCCCC--------CCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 009517 235 HGGTLVPYYLDEATGW--------GLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (533)
Q Consensus 235 ~g~~~~~v~~~~~~~~--------~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~ 305 (533)
.|..++.++.++..+. .+|++.|++.|.+.... ++..|++. ..|.-.|...|.+.++++.++|++|++.
T Consensus 144 ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ip 221 (471)
T COG3033 144 NGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIP 221 (471)
T ss_pred cCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCc
Confidence 7888888887764322 36999999999986322 45566666 4455778999999999999999999999
Q ss_pred EEEccc-cccccc-----cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCH---HHHHH
Q 009517 306 LLADEV-YQENVY-----VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSA---EVREQ 375 (533)
Q Consensus 306 lI~De~-y~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~---~~~~~ 375 (533)
++.|.+ +.+-.| ..+-..+++..+..++.. +.|. +..|.-|- ||. .+ |++.. .++ ++-.+
T Consensus 222 vv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~s-YaD~---~~mS~KKD--~lv--nmGGfl~~--~D~~~fDvy~~ 291 (471)
T COG3033 222 VVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYS-YADG---CTMSAKKD--GLV--NMGGFLCF--KDDSFFDVYEE 291 (471)
T ss_pred EEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHh-hhhh---heeecccc--cee--ccccEEEe--cCccHHHHHHH
Confidence 999976 233222 223356788888777643 3442 24455553 332 33 44444 233 25555
Q ss_pred HHHhh----h--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeE
Q 009517 376 IYKVA----S--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMY 449 (533)
Q Consensus 376 l~~~~----~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~ 449 (533)
++... . ++.+...=...+.+.-|.+. .-..|+.+ . .++.++|.+.|++. |+.++.|.||.-
T Consensus 292 ~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~-----~~~~yl~~---R----v~Qv~YL~~~l~~~-GVpi~~paGGHa 358 (471)
T COG3033 292 CRTLVVVQEGFPTYGGLAGRDMEALAVGLREG-----VNFDYLAH---R----VAQVQYLADGLEEA-GVPIVQPAGGHA 358 (471)
T ss_pred HHhheEeeccccccCcccchhHHHHHHHHHHh-----cCcHHHHH---H----HHHHHHHHHHHHhc-CCeeEecCCCce
Confidence 54432 1 11111222222233333211 11112221 1 23346899999998 999999999998
Q ss_pred EecccC--CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC--CCC--CCC------ceEEEEec---CCcCcHH
Q 009517 450 LFPRIQ--LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF--GQV--PGT------WHFRCTIL---PQEDKIP 514 (533)
Q Consensus 450 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f--~~~--~g~------~~iRis~~---~~~e~i~ 514 (533)
+|++.. +|.--.+ .-....++.++.++.||-.+--..| +.+ .+. ..+|+++. -+.+.++
T Consensus 359 vfvda~~~lphip~e------qFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD 432 (471)
T COG3033 359 VFVDAGKFLPHIPAE------QFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMD 432 (471)
T ss_pred EEeehhhhcCCCChh------hCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHH
Confidence 887643 2210000 1134455667888899987654434 211 111 36999993 5677888
Q ss_pred HHHHHHHHHHHH
Q 009517 515 AIVTRLTDFHKN 526 (533)
Q Consensus 515 ~~~~~l~~~l~~ 526 (533)
..++.++++.+.
T Consensus 433 ~V~~a~~~l~e~ 444 (471)
T COG3033 433 FVIEAFKALKEN 444 (471)
T ss_pred HHHHHHHHHHhc
Confidence 888888877653
No 373
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.02 E-value=7e-07 Score=95.35 Aligned_cols=168 Identities=15% Similarity=0.153 Sum_probs=122.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC---C---
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS---E--- 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~---~--- 214 (533)
++.++..+...+-+. ....|-...+...+.+.+.+++.+.+|.+ ...=.+|+||++|...++..++.. |
T Consensus 96 ~paila~~~a~~~N~---n~~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~ 170 (608)
T TIGR03811 96 MPAILAYNYAMLWNG---NNVAYESSPATSQMEEEVGKEFATLMGYK--NGWGHIVADGSLANLEGLWYARNIKSLPFAM 170 (608)
T ss_pred HHHHHHHHHHHHhCC---CCCccccCchHHHHHHHHHHHHHHHhCCC--CCCeEEeCChHHHHHHHHHHHHHhhhccchh
Confidence 455555554444432 23344444557889999999999998854 333457899999988877765410 0
Q ss_pred ---------------------------------------------C------CeEEEcCCcCcchHHHHHHhCC---eEE
Q 009517 215 ---------------------------------------------N------DGILCPIPQYPLYSASIALHGG---TLV 240 (533)
Q Consensus 215 ---------------------------------------------g------d~Vlv~~p~~~~~~~~~~~~g~---~~~ 240 (533)
| -+|+++.-.|..+..++...|. .++
T Consensus 171 ~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv 250 (608)
T TIGR03811 171 KEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVI 250 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEE
Confidence 0 0577888889999999999998 588
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC--EEEEccccccc
Q 009517 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL--VLLADEVYQEN 315 (533)
Q Consensus 241 ~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~--~lI~De~y~~~ 315 (533)
.||+++ ++.+|++.|++.|++....|.++-+|+-+-....+|.+=+.+++.+|++.++++|+ ++.+|.+|.++
T Consensus 251 ~VpvD~--~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 251 PVPVDS--NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred EeecCC--CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence 999875 56999999999999876677667677777888899999774444444444478898 69999999985
No 374
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=5.6e-08 Score=94.21 Aligned_cols=337 Identities=12% Similarity=0.061 Sum_probs=194.1
Q ss_pred CHHHHHHHHHHHhcCCC---CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
.+++.+.+...+.+..- .....|+...-...|.+.||++++ ..+.|+...|- .++..++.+++ +.||.
T Consensus 110 ~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G-------~E~aivYs~gF-~ti~S~ipafs-KrGDI 180 (467)
T KOG1358|consen 110 NEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG-------TEDAIVYSYGF-STIESAIPAFS-KRGDI 180 (467)
T ss_pred cHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC-------Ccceeeecccc-chhhhcchhhh-ccCcE
Confidence 57888888888776521 134568877767789999999985 24556666654 56777788888 78999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH----hcC--CCee-EEEEeCCCCCCccCCCHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK----AKG--ITVR-ALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~----~~g--~~~~-~iil~~p~NPtG~~~s~~ 290 (533)
|.+..-........+++..-++..+.- -|.++++..+.+.. +.. +.++ .|++.----+||.+.+
T Consensus 181 i~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p-- 251 (467)
T KOG1358|consen 181 IFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP-- 251 (467)
T ss_pred EEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc--
Confidence 988887777777777776666666543 26677766553321 000 1223 4454555556999998
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+.+|+++..+|...+|.||.|+-...+.... ...+..+...+...+++.|+.-++++ . .|+.++ .
T Consensus 252 -l~~iv~lk~Kyk~RvildEs~SfG~lg~~Gr------GvteH~~v~~~~iDiv~~sm~~alas-~---GgFc~G----~ 316 (467)
T KOG1358|consen 252 -LPEIVKLKNKYKFRVILDESLSFGVLGKTGR------GVTEHFGVPITDIDIVTASMETALAS-G---GGFCAG----K 316 (467)
T ss_pred -cHHHHHHHhhheEEEEEecccccccccccCc------cccccCCCCccceeeeeecccccccc-c---Cceeec----c
Confidence 9999999999999999999998644422111 11222222223345778888877732 2 245443 2
Q ss_pred HHHHHHHHhhhcc----ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Q 009517 371 EVREQIYKVASVN----LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEG 446 (533)
Q Consensus 371 ~~~~~l~~~~~~~----~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g 446 (533)
.++-..+++.+.. -+.++....++..++. ..++-..+.+.++.....+.+.|....++.+....-
T Consensus 317 ~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~-----------i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~ 385 (467)
T KOG1358|consen 317 SFIADHQRLSGSGYCFSASLPPYLAGAAIKAIL-----------IEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPE 385 (467)
T ss_pred eeeEeeeeccccceeeeccCchhhhhhHHHHHH-----------HHhhCcchhhhhhccccccchhhhcCCceEEecCcC
Confidence 3333333433322 2234444444444442 222233455556666666777776654555544322
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC---CCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF---GQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f---~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
.-...+.+..+.+-.++-.+ --+.++...+.+ |++++-...- ...+-...+||++. .++|+|+++.+.|+
T Consensus 386 SPi~hl~l~~~~~s~e~e~~----lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik 460 (467)
T KOG1358|consen 386 SPIIHLQLERSYGSREKEEK----LLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIK 460 (467)
T ss_pred CceeeeeecccccchHHHHH----HHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 22222223321110000000 012234455555 8877754322 11111226899994 89999999999998
Q ss_pred HHHHH
Q 009517 522 DFHKN 526 (533)
Q Consensus 522 ~~l~~ 526 (533)
+....
T Consensus 461 ~~~~~ 465 (467)
T KOG1358|consen 461 EVASA 465 (467)
T ss_pred HHHHh
Confidence 87654
No 375
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.93 E-value=4.3e-07 Score=89.95 Aligned_cols=220 Identities=14% Similarity=0.118 Sum_probs=148.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCccc-HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGI-KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~-~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
.+++++++...+...-. . .|.-..|. .+=...+++.+... ...+.++++++.+.|+..++.++. . +.+|+
T Consensus 40 ~~e~iea~~~~~~~~v~--L-e~~l~~g~~~~R~~~~~~~~~~~----~~aea~~ivnnn~aAVll~~~al~-~-~~EvV 110 (395)
T COG1921 40 SPEAIEAMKEAMRAPVE--L-ETDLKTGKRGARLTELAELLCGL----TGAEAAAIVNNNAAAVLLTLNALA-E-GKEVV 110 (395)
T ss_pred CHHHHHHHHHHhcccce--e-eeecccchhhHHHHHHHHHHhcc----cchhheeeECCcHHHHHHHHhhhc-c-CCeEE
Confidence 78999998888876433 3 44433332 22222444444332 336789999999999999999886 4 44444
Q ss_pred EcC-----CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC-CCccCCCHHHHH
Q 009517 220 CPI-----PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEENQR 293 (533)
Q Consensus 220 v~~-----p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N-PtG~~~s~~~l~ 293 (533)
+.- ++.+...++++.+|++++.+-... .....+++.+|.+ ++++++-.+-+| +--..++ .+
T Consensus 111 is~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne------~ta~llkV~s~~~~f~~~l~---~~ 177 (395)
T COG1921 111 VSRGELVEGGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINE------NTALLLKVHSSNYGFTGMLS---EE 177 (395)
T ss_pred EEccccccCCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhcc------CCeeEEEEeecccccccccc---HH
Confidence 432 578889999999999999887543 3578999999988 788887665544 2222344 78
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+++++|+++|+++|+|.+-...+. +-+.+..++.. ..| +++.|-.|.| | |-+.|.+++ .++++
T Consensus 178 ~l~~ia~~~~lpvivD~aSg~~v~----~e~~l~~~la~----GaD---LV~~SgdKll-g--GPqaGii~G---kKelI 240 (395)
T COG1921 178 ELVEIAHEKGLPVIVDLASGALVD----KEPDLREALAL----GAD---LVSFSGDKLL-G--GPQAGIIVG---KKELI 240 (395)
T ss_pred HHHHHHHHcCCCEEEecCCccccc----cccchhHHHhc----CCC---EEEEecchhc-C--CCccceEec---hHHHH
Confidence 899999999999999998865432 12222233221 245 7788889988 4 888999998 99999
Q ss_pred HHHHHhhh-ccccCChHHHHHHHHHcC
Q 009517 374 EQIYKVAS-VNLCSNISGQILASLVMS 399 (533)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~a~~~~L~ 399 (533)
+.+++..- ..+-......++..++|+
T Consensus 241 ~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 241 EKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred HHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 88876431 233444445455555543
No 376
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.93 E-value=4.1e-08 Score=93.78 Aligned_cols=221 Identities=19% Similarity=0.237 Sum_probs=141.6
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHh
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSR 331 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~ 331 (533)
.++++|+.|.++++....+.+||+...+...|- -.|++..+.|.++|++|++.+|+||++++..-+|. ++.-...
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk--~WaHehw-- 329 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK--FWAHEHW-- 329 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc--eeeehhc--
Confidence 368899999998776667888888877887774 77999999999999999999999999998665553 3332221
Q ss_pred hcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHH
Q 009517 332 SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYES 410 (533)
Q Consensus 332 ~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~ 410 (533)
++.. -+| +.+|||-|. +| ||.. +++++-. +..+. .||++.+.-...+..+++..
T Consensus 330 ~l~~-PpD-----~vTFSKK~q--~g---Gffh----~~~frpn-~pYrifNTWmGdP~k~lll~~vv~~I--------- 384 (484)
T KOG1405|consen 330 NLDS-PPD-----VVTFSKKFQ--TG---GFFH----DEEFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEI--------- 384 (484)
T ss_pred CCCC-Ccc-----ceehhhhhh--cC---cccc----CcccCCC-chHHHhhhhcCChHHHHHHHHHHHHH---------
Confidence 1110 244 668999873 33 5664 4444321 11222 56777777766666655321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC----CC-ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccce
Q 009517 411 YCAERDGILSSLARRAKTLEDAFNSL----EG-ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGI 485 (533)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~~~L~~~----~g-~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV 485 (533)
..+.+.+..+.-.+.|...|.++ || +.-.++.|.|..| +.|.+.. -+.++ ..++-+||
T Consensus 385 ---~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~---d~ps~~~----------Rdk~i-~~~~~nGv 447 (484)
T KOG1405|consen 385 ---KREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAW---DCPSGSI----------RDKLI-LIARLNGV 447 (484)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEE---eCCChHH----------HHHHH-HHHHHcCc
Confidence 12455566666777788887765 55 5567788988777 3333211 12222 45566788
Q ss_pred EEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 486 VLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 486 ~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
.+-. +| ...||+-++ -++...+-+++++.+.+..
T Consensus 448 ~~GG---Cg----~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 448 NLGG---CG----DKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eecc---cc----cceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 7763 22 124666664 4555677788888877653
No 377
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.93 E-value=2.3e-07 Score=88.08 Aligned_cols=283 Identities=16% Similarity=0.189 Sum_probs=176.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEEEcCCc-Ccc----hHHHHHHhCCeEEEEecC
Q 009517 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQ-YPL----YSASIALHGGTLVPYYLD 245 (533)
Q Consensus 172 lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vlv~~p~-~~~----~~~~~~~~g~~~~~v~~~ 245 (533)
|-..+|-+++ ..+.+++++.+++--+...+.+.++ .+|++|++++-. |+. ....+..+|.. +.+.
T Consensus 81 lgdklApLiG------A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~~ 151 (407)
T COG3844 81 LGDKLAPLIG------ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDLE 151 (407)
T ss_pred HHHHhhhhhc------CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccce
Confidence 3444455544 6688999999998888888877752 358888888743 332 22334444433 1111
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCccc
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHS 325 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~ 325 (533)
..+.++++++++++ ++.+|++++.+.-||..+. +.+|.+++++++++++.|=+++.... +. .
T Consensus 152 ----~~~~P~~~~~~~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav----p~-~ 213 (407)
T COG3844 152 ----GVIAPRALEEAITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV----PV-D 213 (407)
T ss_pred ----eeeChHHHHHhhcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc----ce-e
Confidence 14578899999988 7999999999999999998 99999999999999999999986332 11 0
Q ss_pred HHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH--------------------hh---h-
Q 009517 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK--------------------VA---S- 381 (533)
Q Consensus 326 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~--------------------~~---~- 381 (533)
+ ... ..| +-|++--|.+.|=||-..|..+. ++..+.... .. .
T Consensus 214 ---L-h~~---gaD---faigcsyKYLNgGPGapa~l~v~----~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf 279 (407)
T COG3844 214 ---L-HAA---GAD---FAIGCSYKYLNGGPGAPAGLFVA----PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRF 279 (407)
T ss_pred ---e-ccc---CCC---eeeeeeceeccCCCCCceeEEec----cccccccccccccccCCCCcchhhhccCcCccccce
Confidence 0 111 223 66888889997778866555443 222211111 00 0
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--CceEecCC-----ceeEEecc
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-E--GITCNKAE-----GAMYLFPR 453 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~-----gg~~~~~~ 453 (533)
...+++.++.+++...|+. |... .+.+++++--...+++.+.++.. + ++.+..|. |+-..+
T Consensus 280 ~~gt~~V~s~aal~~aLDi-------fa~~--~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~-- 348 (407)
T COG3844 280 LCGTQPVLSLAALEGALDI-------FADV--DITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSL-- 348 (407)
T ss_pred eeCCcchhhhHHHhhhhhh-------hhhc--CHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeE--
Confidence 1133455555655555542 1111 14555555455566666666553 2 56665553 332222
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---CCcCcHHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL---PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 528 (533)
..| ....+.+.|.++||..- |- .++ .+|+.++ ++-+++=.+++.|.+++++..
T Consensus 349 -~hp--------------~~~~V~qaLi~rGVigD----~R-~P~--vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 349 -YHP--------------HGYQVMQALIDRGVIGD----FR-EPD--VLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred -ecC--------------cHHHHHHHHHHcCcccc----cc-CCC--eeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 122 22235577788999653 22 233 8999996 788889999999999988653
No 378
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.87 E-value=5.6e-07 Score=89.54 Aligned_cols=308 Identities=16% Similarity=0.184 Sum_probs=192.4
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCE-EEcCChHHHHHHHHHHhc---cC-CC---CeEEEcCCcCcchHHHHHHhCCeE
Q 009517 168 GIKGLRDTIAAGIEARDGFPADPNDI-FLTDGASPAVHMMMQLLI---RS-EN---DGILCPIPQYPLYSASIALHGGTL 239 (533)
Q Consensus 168 G~~~lr~aia~~~~~~~g~~~~~~~i-~~t~G~~~al~~~~~~l~---~~-~g---d~Vlv~~p~~~~~~~~~~~~g~~~ 239 (533)
+..++..++.+++...++.+ .+.+ ..|.|+++++..+-+... .. .| ..++.+.-.+..+...++.++.++
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~--~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAP--SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCC--ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 35677888888888877755 3333 668899999666555432 01 12 357777788888888899999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcccccccccc
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADEVYQENVYV 318 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~-~~~~lI~De~y~~~~~~ 318 (533)
..+|+++ .+|.+|+..+.+.+.+ ++..++..-|+-|+|.+ |.+++|.++..+ +++.+.+|.+-.+|+-.
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p 264 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINP 264 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCcccccc
Confidence 9999997 5899999999999998 89999999999999998 559999999999 99999999999987752
Q ss_pred -CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH-HH-------HHhh-hccccC--
Q 009517 319 -PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-QI-------YKVA-SVNLCS-- 386 (533)
Q Consensus 319 -~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~-~l-------~~~~-~~~~~~-- 386 (533)
+..... .++-..+.+.-|.+.+ +| + |+.=-.+||++- .++++.. ++ -... +.|.+.
T Consensus 265 ~~~~~~~-------~fdFr~p~V~Sisa~~-HK-Y-Gl~~~G~~~vl~--r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR 332 (491)
T KOG1383|consen 265 AGYLNEE-------EFDFRVPGVTSISADG-HK-Y-GLAPAGSSWVLY--RNKELLPHQLFFHTDWLGGIYASPTLNGSR 332 (491)
T ss_pred ccccCcc-------ccccCCCCceeEeecc-ce-e-eeeecCcEEEEE--cccccccceEEEeccccCccccCcccccCC
Confidence 111100 1100134544444433 45 3 444444688876 3443321 11 0011 122222
Q ss_pred ---ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCceeEEecccCCCHHHHH
Q 009517 387 ---NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-AEGAMYLFPRIQLPEKAIK 462 (533)
Q Consensus 387 ---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~~~~ 462 (533)
...+|+++..-|. + +...+..+.+.+....|++.+++++++.++. |.-++.+|-.-.+
T Consensus 333 ~g~~va~~wa~~~~lG--------~----eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~------ 394 (491)
T KOG1383|consen 333 PGSQVAAQWAALMSLG--------E----EGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDV------ 394 (491)
T ss_pred cccHHHHHHHHHHHhh--------H----HHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCcc------
Confidence 2334444433331 1 2223344456667778999999988887764 4545444421111
Q ss_pred HHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 463 AAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 463 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+...+..+|.+.|..+. +..|. . .-++-+... ..++--++++..|+++++++.+.
T Consensus 395 ---------~i~elsd~l~~~GW~ln-alq~P--~-a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 395 ---------NIFELSDLLRKKGWILN-ALQFP--A-AIHICVTRVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred ---------chhhhhHHHHhcCcCcc-ccCCC--C-ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhC
Confidence 12224467788887554 33332 2 225555544 34444577888888888887653
No 379
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.71 E-value=4.6e-06 Score=92.45 Aligned_cols=280 Identities=12% Similarity=0.108 Sum_probs=162.3
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--CCCCeEEEcCCcCcchHHHHH----HhCCeE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--SENDGILCPIPQYPLYSASIA----LHGGTL 239 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~gd~Vlv~~p~~~~~~~~~~----~~g~~~ 239 (533)
++|..+..=.+...+.+..| .+..|.-+-.+++.+.+.++.+... +.+++|++++-.|+.+...++ ..|.++
T Consensus 104 sQG~Le~l~e~Qt~i~eLtG--m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v 181 (939)
T TIGR00461 104 SQGRLEALLNFQTVVSDLTG--LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEV 181 (939)
T ss_pred hhHHHHHHHHHHHHHHHHHC--CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEE
Confidence 44544433334444444445 4556777777888877766665421 234789999999988775554 678888
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccC
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~ 319 (533)
+.++ +++|++.+ ++.++++.+|+. .|.+. ++++|+++++++|.+++++.--..+. .
T Consensus 182 ~~~~----------~~~l~~~~--------~~~~v~~q~Pn~-~G~ie---d~~~i~~~~h~~gal~~~~ad~~al~--l 237 (939)
T TIGR00461 182 IVVD----------CSDIKKAV--------DVFGCLLQYPAT-DGSIL---DYKQLIDALHSHKSLVSVAADLMALT--L 237 (939)
T ss_pred EEEc----------HHHHhhcC--------CEEEEEEECCCC-CeEEe---cHHHHHHHHHHcCCEEEEEechHHhC--C
Confidence 7763 34444433 367888889875 78885 49999999999999999853332211 1
Q ss_pred CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCC----CCCeeEEEEEecCCHHHHHHHHH-----------------
Q 009517 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE----CGKRGGYMEVTGFSAEVREQIYK----------------- 378 (533)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl----~G~riG~v~~~~~~~~~~~~l~~----------------- 378 (533)
- .+. -++ ..| |++++ +|.| |+ .|--.|++.+ .++++..+-.
T Consensus 238 l---~~P----ge~---GaD---i~vg~-~q~f-g~p~g~GGP~aG~~a~---~~~l~r~lPgrivG~s~D~~G~~~~~l 299 (939)
T TIGR00461 238 L---TPP----GHY---GAD---IVLGS-SQRF-GVPMGYGGPHAAFFAV---KDEYNRKMPGRIVGVSKDALGNTALRL 299 (939)
T ss_pred c---CCH----HHc---CCc---EEeeC-CCcc-CCCCCCCCCceeeeee---cHhhHhhCCCCceeEEecCCCCcccee
Confidence 1 111 122 234 44443 4545 33 1444788776 5555544310
Q ss_pred --------hhh--cc--ccCChHHHHHHHHHcCCCCCCChhHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Q 009517 379 --------VAS--VN--LCSNISGQILASLVMSPPKVGDESYESY--CAERDGILSSLARRAKTLEDAFNSLEGITCNKA 444 (533)
Q Consensus 379 --------~~~--~~--~~~~~~~q~a~~~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 444 (533)
+.. .+ .|.+....+..+.+ |..+ -+-++++.++...+..++.+.|.+. |+++..+
T Consensus 300 ~LqtReqhIrRekAtSNICt~qaL~a~~a~~----------Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~ 368 (939)
T TIGR00461 300 ALQTREQHIRRDKATSNICTAQVLLANVASS----------YCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELINK 368 (939)
T ss_pred ecccccccccccccCcchhHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC
Confidence 000 11 12222221111111 1111 1336677777888888999999985 8887655
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
.||=.+.+..+. .+.+.. .+.+.++||.+.. ...+.+++|+. .+.++|+.+++.+.
T Consensus 369 --~fF~~~~v~~~~-----------~~~~~i-~~~~~~~gi~l~~-------~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 369 --TWFDTLTVKVGN-----------GISSEL-LKAAEEFNINLRA-------VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred --CccceEEEEeCC-----------CCHHHH-HHHHHHCCCeeee-------cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 333222233220 112333 3556678999774 11237999996 78889999999884
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.65 E-value=1.9e-06 Score=85.44 Aligned_cols=317 Identities=15% Similarity=0.145 Sum_probs=164.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChHH-HHHHHHHHhc-cCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC-
Q 009517 172 LRDTIAAGIEARDGFPADPNDIFLTDGASP-AVHMMMQLLI-RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT- 248 (533)
Q Consensus 172 lr~aia~~~~~~~g~~~~~~~i~~t~G~~~-al~~~~~~l~-~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~- 248 (533)
|...++..+-+..|.. +....++.+.+|. .+.+.+.++. ...++.|+.+.-.+..-..++..+|.+++.++....+
T Consensus 57 ltn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCC
Confidence 3444444444445533 1344666655543 2334444442 1346889988877666666788899999998854332
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHH
Q 009517 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~ 328 (533)
....|.+.+++.+++. |++..+.++++++--.|.. .|++++|+++|++||+..|+..+|.- .. ..-...
T Consensus 136 ~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~--~D~i~~IakiC~~~~IPhlvNnAYgv---Q~---~~~~~~ 204 (389)
T PF05889_consen 136 ELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRL--PDDIEEIAKICKEYDIPHLVNNAYGV---QS---SKCMHL 204 (389)
T ss_dssp EEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT---T----HHHHHH
T ss_pred eeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCC--CccHHHHHHHHHHcCCceEEccchhh---hH---HHHHHH
Confidence 2345789999999765 4455666677664333443 24699999999999999999999974 11 111111
Q ss_pred H--HhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCC
Q 009517 329 V--SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGD 405 (533)
Q Consensus 329 ~--~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~ 405 (533)
+ +...+ .-| ++++|.-|+|. -+..-+-+.+ .++..+..+.+... ..+..+.+-..+-...| |.
T Consensus 205 i~~a~~~G--Rvd---a~vqS~dkNF~--VPvGgai~As--~~~~~i~~vs~~YpGRas~sp~ld~~itLl~L-----G~ 270 (389)
T PF05889_consen 205 IQQAWRVG--RVD---AFVQSTDKNFM--VPVGGAIMAS--FDPSGILAVSKEYPGRASASPSLDLFITLLSL-----GC 270 (389)
T ss_dssp HHHHHHHS--TCS---EEEEEHHHHHC--EESSHEEEEE--SSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHH-----HH
T ss_pred HHHHHhcC--Ccc---eeeeecCCCEE--ecCCCcEEEe--cCHHHHHHHHHHhhhhhhcccchHHHHHHHHH-----hh
Confidence 1 11121 122 56999999984 4444444444 47788888876554 22333332222222222 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccce
Q 009517 406 ESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGI 485 (533)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV 485 (533)
..|...+.++.+....++++.+.+.+..++. -.........+.+.+. .+... ...+..++-.+|..+||
T Consensus 271 ~g~~~ll~~r~~~f~~l~erl~~~aee~~e~-ll~~p~N~is~a~tl~-~l~~~---------~~k~~~~lgs~Lf~R~V 339 (389)
T PF05889_consen 271 TGYGALLKERKASFPYLKERLKKWAEEVGER-LLETPRNHISMAFTLD-TLYEI---------SQKDGTFLGSMLFKRGV 339 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTEE-BSSSTT-SSEEEEE-T-TCCTC---------CSSHHHHHHHHHHHTTE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcCCCCCCeeEEEECc-cchhh---------ccchhhhHHHHHHhCCc
Confidence 3344444444444444555444444444332 1111112223333221 01110 01233455566777776
Q ss_pred E----EEcCCCCCC----CCCCceEEEEe--cCCcCcHHHHHHHHHHHHH
Q 009517 486 V----LVPGSGFGQ----VPGTWHFRCTI--LPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 486 ~----v~pg~~f~~----~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~ 525 (533)
. |.|+..+.. .-...|+-++. +.+.||++.++++|+++++
T Consensus 340 sG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 340 SGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp ESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred ccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 4 555443321 00123888855 4899999999999999875
No 381
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.64 E-value=4.3e-08 Score=96.19 Aligned_cols=263 Identities=16% Similarity=0.143 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHH-HHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLR-DTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr-~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
++++++++.+....+ ...+|.-..|-..-| ..+.+++... ..++..+++|+...|+.+++..+. .|.+|+
T Consensus 19 ~~~a~~a~~~~a~~Y---~nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la--~~~EvI 89 (367)
T PF03841_consen 19 SEEAIEAVAEVASGY---SNLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLA--KGKEVI 89 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccc---cccccccccccccccccccccccccc----cccccccccccccccccccccccc--cccccc
Confidence 678888877766543 244554433322221 1223333322 346778888999999999999886 577888
Q ss_pred EcCCcCc------chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH-HHH
Q 009517 220 CPIPQYP------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE-ENQ 292 (533)
Q Consensus 220 v~~p~~~------~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~-~~l 292 (533)
+....-. -..+++...|++++.+-... .-.+++++++|++ +|.+|+-.|++|-.-.=++. -.+
T Consensus 90 vsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e------~Ta~ll~Vh~Sn~~i~GFt~~~~~ 159 (367)
T PF03841_consen 90 VSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITE------NTAALLKVHTSNFRIQGFTGEVSL 159 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc----ccccccccccccc------cccccccccccccccccccccccH
Confidence 7763322 24567788899988886542 4568899999988 79999888988863221111 138
Q ss_pred HHHHHHHHHcCCEEEEcccccccc----ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENV----YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++++++++|++++|+|-.-..+. | +-..-+++..+... ..| +++.|=.|.+ | |-..|.+++
T Consensus 160 ~el~~la~~~~lp~i~DlgsG~l~dl~~~-gl~~Ep~v~~~~~~----GaD---lV~fSGdKlL-G--GPQaGiI~G--- 225 (367)
T PF03841_consen 160 EELAELAKEHGLPVIVDLGSGLLVDLSPY-GLPDEPTVQEYLAA----GAD---LVTFSGDKLL-G--GPQAGIIVG--- 225 (367)
T ss_dssp -HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCC----T-S---EEEEETTSSS-S--S-S-EEEEE---
T ss_pred HHHHHHHhhcCCcEEEECCCCCCcCcccc-cCccccHHHHHhhc----CCC---EEEEECCCcC-C--CCCeEEEEe---
Confidence 999999999999999997663221 1 10011222222111 234 7788888988 4 666899998
Q ss_pred CHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 369 SAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYES--YCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 369 ~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
.+++++++++-.- ..+-..-...+++.+.|+.-...+...++ ....+....+.++++.+.|...|...
T Consensus 226 kk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 226 KKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp EHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred CHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 9999999875321 33445555555555555311000000000 11223334455666666677666654
No 382
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.60 E-value=2e-05 Score=78.08 Aligned_cols=140 Identities=21% Similarity=0.256 Sum_probs=106.1
Q ss_pred ccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEc--CChHH--HHHHHHHHhccCCC----CeEEEcCCcCcch
Q 009517 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLT--DGASP--AVHMMMQLLIRSEN----DGILCPIPQYPLY 228 (533)
Q Consensus 160 ~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t--~G~~~--al~~~~~~l~~~~g----d~Vlv~~p~~~~~ 228 (533)
.+-|.| .+|+.++...+.+|+.+.-| .|.|-+. .|++. +-.++++..-...| +.|++|+-.+...
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 455655 57899999999999998655 4455443 33322 22233333321222 6799999999998
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
...+..+|.+++.|++++++ .+|+++|++++.+ ++.++.|++||. -|+- ++.+++|+++.+++|-.|..
T Consensus 171 PASAam~G~~VV~V~~~~~G--~VDlddLk~k~~~------~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~ 239 (496)
T COG1003 171 PASAAMAGFKVVVVKCDENG--NVDLDDLRAKAED------NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYY 239 (496)
T ss_pred hhhHhhcCceEEEEecCCCC--CccHHHHHHHhcc------ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEe
Confidence 98999999999999998764 7899999999986 899999999984 3443 56799999999999999999
Q ss_pred cccccc
Q 009517 309 DEVYQE 314 (533)
Q Consensus 309 De~y~~ 314 (533)
|.+--.
T Consensus 240 DGANlN 245 (496)
T COG1003 240 DGANLN 245 (496)
T ss_pred cCcchh
Confidence 987644
No 383
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.57 E-value=3.4e-06 Score=79.27 Aligned_cols=175 Identities=19% Similarity=0.227 Sum_probs=119.4
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc-CcchHH----------HHHHhC
Q 009517 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-YPLYSA----------SIALHG 236 (533)
Q Consensus 168 G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~-~~~~~~----------~~~~~g 236 (533)
|-..|.+..|+.+ |.....-+.-+.+ +++|+..++..++ +|||+.+..... |..... .++.+|
T Consensus 66 GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~L-RpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 66 GRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGIL-RPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred chhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhcc-CCCCeEEEecCCcchhHHHHhccCCCCcccHHHhC
Confidence 4455555555554 4223233445555 5699999999988 899997654422 333332 355677
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQ 313 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~--~~~lI~De~y~ 313 (533)
.....+|+..++ .+|.+.+++++++ ++|+|.+. +-..----.++-+++++++.+.++- |+++++|.+|.
T Consensus 140 i~Y~~v~Lt~~g--kiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG 211 (416)
T COG4100 140 IKYKAVPLTADG--KIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG 211 (416)
T ss_pred cceeecccccCC--cccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch
Confidence 888889988654 7999999999998 89999887 4332222247778899999999875 79999999999
Q ss_pred cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC--eeEEEEEecCCHHHHHHH
Q 009517 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK--RGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~--riG~v~~~~~~~~~~~~l 376 (533)
+|+-.-+ | . ++ ..| +..+|+-|+- | .|+ -.||+++ .++++++.
T Consensus 212 EFvE~~E-P-t-------~v---GaD---liAGSLIKNp-G-GgiaktGGYiaG---k~~~ve~~ 256 (416)
T COG4100 212 EFVEEKE-P-T-------HV---GAD---LIAGSLIKNP-G-GGIAKTGGYIAG---KAELVEAA 256 (416)
T ss_pred hhhhccC-c-c-------cc---chh---hhccceeeCC-C-Cceeeccceeec---hHHHHHhh
Confidence 9775432 1 1 11 233 6689999987 3 253 3688887 77887765
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.53 E-value=1.3e-05 Score=81.50 Aligned_cols=220 Identities=20% Similarity=0.251 Sum_probs=120.7
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--CCCCeEEEcCCcCcchHHHHHH----hCCeE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--SENDGILCPIPQYPLYSASIAL----HGGTL 239 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~gd~Vlv~~p~~~~~~~~~~~----~g~~~ 239 (533)
++|..+..-.+..++.+.-|.+ .-|.-+-.|++.+.+.++.+... +.+++|+++.-.++.+...++. .|.++
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTGmd--vaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~i 182 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTGMD--VANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEI 182 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTSS--EE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCC--ccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEE
Confidence 5676555555555555555633 33444556666666655444321 2335999999999988875544 68899
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccC
Q 009517 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (533)
Q Consensus 240 ~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~ 319 (533)
+.++.++.. ..| .+ ++.+|++.+||. .|.+-+ +++|.++++++|.++++ .+. -+...+
T Consensus 183 v~~~~~~~~--~~d--------~~------~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad-~~aL~~ 240 (429)
T PF02347_consen 183 VEVPLDEDG--TTD--------DD------DTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GAD-PNALGG 240 (429)
T ss_dssp EEE-BBTTC--SB---------ST------TEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGG-CCGCCT
T ss_pred EEecccccC--Ccc--------cc------CeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecC-HHHHhC
Confidence 999987653 233 22 899999999986 688855 99999999999999887 322 222322
Q ss_pred CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC----CCeeEEEEEecCCHHHHHHHH------------------
Q 009517 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC----GKRGGYMEVTGFSAEVREQIY------------------ 377 (533)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~----G~riG~v~~~~~~~~~~~~l~------------------ 377 (533)
-.+ . -++ ..| |++++ +|.| |+| |=-.|++.+ .++++.++-
T Consensus 241 l~~---P----ge~---GAD---I~vg~-~Q~f-g~p~~~GGP~~G~~a~---~~~l~r~lPGRiVG~t~D~~G~~~~~l 302 (429)
T PF02347_consen 241 LKS---P----GEY---GAD---IVVGE-HQTF-GIPMGFGGPGAGFFAV---REDLVRQLPGRIVGQTKDADGKRAFVL 302 (429)
T ss_dssp C-----G----GGG---T-S---EEEEC-CTTT-T---CCC-S--EEEEE----GGGGGGS-S-EEEEEEBCCCSCCEEE
T ss_pred cCC---h----hhc---Ccc---EEeeC-CCCC-cccCCCCCCCeeeEEE---hhhhhhhCCCceecccccccccceeee
Confidence 111 1 122 245 55655 7877 332 344788877 555554332
Q ss_pred ----------Hhhh-ccccCChHHHHHHHHH-cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 378 ----------KVAS-VNLCSNISGQILASLV-MSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 378 ----------~~~~-~~~~~~~~~q~a~~~~-L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
+-+. +..|.+....+.++.+ +. + .-.+-++++.+....+..++.+.|+++
T Consensus 303 tLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~--------~-~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 303 TLQTREQHIRREKATSNICTNQALLALAAAIYLA--------Y-LGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp E-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHH--------H-HHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccccccccccccchhhhhhhhHHHHHHHHHHHHH--------H-hCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 2234443333222111 10 0 123457888888999999999999986
No 385
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.50 E-value=0.00016 Score=72.19 Aligned_cols=147 Identities=20% Similarity=0.276 Sum_probs=104.2
Q ss_pred CCcccHHHHHHHHHHHHhhcCCCC--------CCCCEEEcCChHHHHHHHHHHhcc------CCCC------------eE
Q 009517 165 HSQGIKGLRDTIAAGIEARDGFPA--------DPNDIFLTDGASPAVHMMMQLLIR------SEND------------GI 218 (533)
Q Consensus 165 ~~~G~~~lr~aia~~~~~~~g~~~--------~~~~i~~t~G~~~al~~~~~~l~~------~~gd------------~V 218 (533)
...-..||..-+.+|+++..+.+. +.-.|+.++ ++++...++.+.+. +.++ .+
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~t-ases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGT-ASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecC-cchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 344478999999999998776541 122444444 44665555544321 1111 36
Q ss_pred EEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 009517 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (533)
Q Consensus 219 lv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l 298 (533)
+..+.++.....++...|.+...++.+. +|+++.+.|+++|++....|--+ .+++.+.. |-.+-.-|++.+|..+
T Consensus 186 Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIP-f~v~at~G--TT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIP-FFVCATLG--TTSSCAFDELEELGPV 260 (511)
T ss_pred EecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCcc-EEEEEeec--CccccccccHHHhcch
Confidence 7788888899999999999999999886 89999999999999986666333 33333432 2223344679999999
Q ss_pred HHHcCCEEEEccccccccc
Q 009517 299 CKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 299 ~~~~~~~lI~De~y~~~~~ 317 (533)
|+++|+|+.+|.+|+|-.|
T Consensus 261 c~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 261 CREEGLWLHVDAAYAGSAF 279 (511)
T ss_pred hhhcCEEEEeehhhccccc
Confidence 9999999999999997555
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.43 E-value=0.00013 Score=71.16 Aligned_cols=320 Identities=16% Similarity=0.144 Sum_probs=171.3
Q ss_pred cCCCCHHHHHHHHHHHhcCCCC--CccccCC-CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC
Q 009517 137 QGLFSADSIERAWQILDQIPGR--ATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~--~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 213 (533)
|..+|++|++.+.+.+.+..+. +.++-.. ..-..++.+...+.+.+.++++-+.+=+++-.|++.....+...++ .
T Consensus 13 Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl-~ 91 (365)
T COG1932 13 PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLL-G 91 (365)
T ss_pred cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhh-c
Confidence 4455899999998877653220 0111111 1113445555556666666766555444555677888888888887 3
Q ss_pred CCCeEEEcCCcCcchHH-HHHHhCCeEE-EEecCCCCCCC--CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 214 ENDGILCPIPQYPLYSA-SIALHGGTLV-PYYLDEATGWG--LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~-~~~~~g~~~~-~v~~~~~~~~~--ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
....-++....|..... .++..+..+. ........+|+ ++++... +.+ +...|.+|.-..-+|+-++.
T Consensus 92 ~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~------~~ayv~~~~NeTi~Gv~v~~ 163 (365)
T COG1932 92 KRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD------NDAYVHFCWNETISGVEVPE 163 (365)
T ss_pred ccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCC------CccEEEEecCCcccceEccC
Confidence 33221566667765432 3344443221 11111222333 3444333 222 33336666555566876551
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
...+ .. +.++|+|....-|.. ..++..+ | ++-.|..|++ |..| ++.++. .
T Consensus 164 --~p~~---~~--~~~~v~D~SS~ilsr-----~iDvsk~---------d---viyagaQKnl-GpaG--ltvvIv---r 213 (365)
T COG1932 164 --LPDI---GS--DGLLVADASSAILSR-----PIDVSKY---------D---VIYAGAQKNL-GPAG--LTVVIV---R 213 (365)
T ss_pred --CCCC---CC--CceEEEecccHHhcC-----CCChhHc---------c---eEEEehhhcc-Cccc--eEEEEE---c
Confidence 1111 11 278899976654322 1222221 2 4456889999 7777 777777 8
Q ss_pred HHHHHHHHHh-------------hhccccC-ChHHHHHHHHHcCCCCCCChhHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 009517 370 AEVREQIYKV-------------ASVNLCS-NISGQILASLVMSPPKVGDESYESYCAE---RDGILSSLARRAKTLEDA 432 (533)
Q Consensus 370 ~~~~~~l~~~-------------~~~~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~ 432 (533)
+++++++... ...+++. ++++-+.....+ +|+.. ++.+.++-+++.+.|++.
T Consensus 214 ~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~-----------~Wlk~~GGl~~~~~rn~~ka~~LY~~ 282 (365)
T COG1932 214 PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVF-----------KWLKSQGGLEALEARNQAKAQLLYDW 282 (365)
T ss_pred HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHH-----------HHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 8888877553 1123443 444444444444 24443 677888888889999999
Q ss_pred HhcCCCce--Ee--cCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 433 FNSLEGIT--CN--KAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 433 L~~~~g~~--~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
+++- +|. .+ ..+.-|.+.+.+. .. +-+..|+.+ ++++|+..--|.. ..| .+|+|+.
T Consensus 283 id~s-~fy~~~v~~~~RS~mnV~f~~~--~~----------~ld~~fv~e-ae~~gl~~lkGhr---~vg--GmRasiyn 343 (365)
T COG1932 283 IDKS-DFYRNLVAKANRSRMNVTFTLV--DA----------ELDKGFVAE-AEAAGLIYLKGHR---SVG--GLRASIYN 343 (365)
T ss_pred HHhC-CccccccchhhccceeEEEEcC--cH----------HHHHHHHHH-HHHcCCceecccc---CCC--ceeeeeec
Confidence 9876 322 11 2334555554433 11 114455555 4556776665521 222 4899994
Q ss_pred -CCcCcHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~ 525 (533)
.+.++++.+++-|+.+.+
T Consensus 344 A~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 344 AVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 666666655555555443
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.42 E-value=0.0002 Score=70.78 Aligned_cols=333 Identities=14% Similarity=0.142 Sum_probs=171.2
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC--CC----------CeE-EEcCCcCc
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS--EN----------DGI-LCPIPQYP 226 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~g----------d~V-lv~~p~~~ 226 (533)
...|--..+..-..+.+-..+.+.-|++...|.|+- +||+-+...++.+...+ |+ +-| ..++-++.
T Consensus 130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~-pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHY 208 (510)
T KOG0629|consen 130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFA-PGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHY 208 (510)
T ss_pred CceEEecceEEeehHHHHHHHHHHhCCCCCCCceec-CCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchh
Confidence 444544444433444444555555576666556654 55544444444443211 22 223 34557788
Q ss_pred chHHHHHHhC---CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 227 LYSASIALHG---GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 227 ~~~~~~~~~g---~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
+...++..+| -.++.|+.++.+ .+++++||+.|...+.+|..+-.|-.+.-..--|.. +.+..|+++|++|+
T Consensus 209 Si~kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~ 283 (510)
T KOG0629|consen 209 SIKKAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHK 283 (510)
T ss_pred hHHHHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcC
Confidence 8888889988 578888887653 899999999999886655333222222223444665 44999999999999
Q ss_pred CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhc-
Q 009517 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV- 382 (533)
Q Consensus 304 ~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~- 382 (533)
+|+.+|.+|.+...-.. .+. ..+..+ ++-+. +-.+-+|.+ | +.+..+..+. ..+.++.+.......
T Consensus 284 lWmHvDAAwGGglLmS~-k~R---~kl~Gi---era~S--vtwnpHK~~-g-aplqCsa~l~--r~~gll~~Cn~~~A~Y 350 (510)
T KOG0629|consen 284 LWMHVDAAWGGGLLMSR-KHR---HKLTGI---ERANS--VTWNPHKLM-G-APLQCSAFLT--REEGLLQRCNQMSAIY 350 (510)
T ss_pred EEEEeecccccccccCh-hhH---hhccCc---cccCc--eeecHHHhh-c-CcchhhHHHH--HHHHHHHhhcccchhh
Confidence 99999999987222111 010 111222 22211 245667877 5 5677776654 122233333221110
Q ss_pred ------cccCChHHHHHHHHHcCCCCCCChhHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCCceE-ec--CC-
Q 009517 383 ------NLCSNISGQILASLVMSPPKVGDESYESYCA-------ERDGILSSLARRAKTLEDAFNSLEGITC-NK--AE- 445 (533)
Q Consensus 383 ------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~--~~- 445 (533)
.+..+- -.....+.-+.+ ...|..|.- -.++..+.+-+.++++.+.|++.+++.. +. |+
T Consensus 351 LFq~dK~YdvS~---DTgdK~iQCGRh-~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~ 426 (510)
T KOG0629|consen 351 LFQQDKFYDVSY---DTGDKAIQCGRH-VDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEH 426 (510)
T ss_pred hhccCceeeccc---ccccchhhcCcc-ccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCce
Confidence 000000 000000100000 011222222 2355667778888999999998866433 22 44
Q ss_pred ceeEEecccCCCHHHHH-------HHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---CCcCcHHH
Q 009517 446 GAMYLFPRIQLPEKAIK-------AAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL---PQEDKIPA 515 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~ 515 (533)
-.+..|. .|..+.. ......+-. -++..+.+.|-.+..-...+ ...++||+-+. .++++++-
T Consensus 427 ~nv~fw~---vp~~lR~~~~~~e~~~rL~kVaP---kIK~~Mm~~Gt~Mi~YqPl~--~~~nffr~v~sn~a~~~ad~df 498 (510)
T KOG0629|consen 427 VNVCFWY---VPPSLRGWQENPERDSRLVKVAP---KIKERMMKKGTTMIGYQPLG--DKPNFFRMVISNPALTEADLDF 498 (510)
T ss_pred EEEeecc---CchHhccCcccchhhhHHHhhCc---HHHHHHHhccceeeEecccc--cccchhheecccchhhhhhHHH
Confidence 2333332 2222100 000000000 12223334676665433232 22348998884 57888888
Q ss_pred HHHHHHHH
Q 009517 516 IVTRLTDF 523 (533)
Q Consensus 516 ~~~~l~~~ 523 (533)
+++-|+++
T Consensus 499 lldEIerl 506 (510)
T KOG0629|consen 499 LLDEIERL 506 (510)
T ss_pred HHHHHHHh
Confidence 88888764
No 388
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.39 E-value=0.00068 Score=67.47 Aligned_cols=266 Identities=18% Similarity=0.246 Sum_probs=146.5
Q ss_pred CCEEEcCChHHHHHHHHHHhcc--CCCCeEEEcCCcCcchHHHHHH----hCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIR--SENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~--~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
-|--+-.++|.+-+.++.+... .+..+++++.-+|+.+...++. .|.+++.++.+ |.++++++ ...
T Consensus 138 ANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~~~ 209 (450)
T COG0403 138 ANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-DDG 209 (450)
T ss_pred ccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-ccc
Confidence 3444445666655555554431 2357899999999998887765 35666666554 67777777 432
Q ss_pred HhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc--cccccccccCCCCcccHHHHHhhcCCCCCCceE
Q 009517 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD--EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D--e~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 342 (533)
.+.++++.+|+. .|.. .+++++|.+.+++++.++++= -.--.+. .+ | -++ ..|
T Consensus 210 -----~~~gv~vQyP~~-~G~~--~~d~~~l~~~~h~~~al~~v~aDplaL~LL-~p--P--------Ge~---GAD--- 264 (450)
T COG0403 210 -----DVFGVLVQYPNT-FGIV--EEDLRALIEAAHSAGALVIVAADPLALGLL-KP--P--------GEF---GAD--- 264 (450)
T ss_pred -----CeEEEEEecCCC-CCcc--chhHHHHHHHHhhcCCEEEEEechhHhhcc-CC--c--------ccc---CCc---
Confidence 688999999984 5632 345999999999999877652 1111111 00 0 111 244
Q ss_pred EEEecCCc---cCCCCCCCeeEEEEEecCCHHHHHHH----------------------------HHhhh-ccccCChHH
Q 009517 343 VSFQSVSK---GYYGECGKRGGYMEVTGFSAEVREQI----------------------------YKVAS-VNLCSNISG 390 (533)
Q Consensus 343 i~i~S~SK---~~~gl~G~riG~v~~~~~~~~~~~~l----------------------------~~~~~-~~~~~~~~~ 390 (533)
|++++-.- -+ |..|-..||+.+ .++++.++ ++-+. +..|.+..-
T Consensus 265 IvvG~~QrfGvPm-gfGGPhag~fA~---~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaL 340 (450)
T COG0403 265 IVVGSAQRFGVPM-GFGGPHAGYFAV---KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQAL 340 (450)
T ss_pred eEEecCcccCCCc-CCCCcceeeeeE---hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHH
Confidence 66776544 22 223566788877 55554322 11111 223333222
Q ss_pred HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CceEecCCceeEEecccCCCHHHHHHHHhcCC
Q 009517 391 QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE-GITCNKAEGAMYLFPRIQLPEKAIKAAEAEKT 469 (533)
Q Consensus 391 q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 469 (533)
.+.++.+. ..|. --+-++++.++..++..++.++|++.. |+..... .||-.+-++++...
T Consensus 341 lA~~As~y-------~~~h-Gp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~~--------- 401 (450)
T COG0403 341 LALAASMY-------AVYH-GPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEEV--------- 401 (450)
T ss_pred HHHHHHHH-------HHHh-ChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchhH---------
Confidence 22111110 0111 124467888888889999999999762 4665544 44444445544211
Q ss_pred CChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHH
Q 009517 470 VPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 470 ~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~ 522 (533)
.... .+.....|+-+.. + ... .+=|++. .+.++|+.+++.+..
T Consensus 402 --~~~l-~~~~~~~G~~L~~---~--~~~--~~~ia~tEt~t~~~i~~l~~~~~~ 446 (450)
T COG0403 402 --AEAL-LAAAIAGGINLRR---V--DAD--TVLIALTETTTKEDIDALVAAFGG 446 (450)
T ss_pred --HHHH-HHHHHhcCCceee---e--cCC--ceEEEeecccCHHHHHHHHHHHhh
Confidence 1111 1223345776663 1 111 4556664 566777777776654
No 389
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.36 E-value=0.00037 Score=67.61 Aligned_cols=326 Identities=14% Similarity=0.094 Sum_probs=181.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCc--ccHHHHHHH----HHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHHHhcc
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQ--GIKGLRDTI----AAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIR 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~--G~~~lr~ai----a~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~ 212 (533)
...|++++-..+.+... .+|+-.. |-.++.+.+ .+.-.+.|+.+.... ||-.-+ ++.|...+..+++
T Consensus 53 s~aVmeAlGS~ltNKYS---EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~S-GSPANfavYtall- 127 (477)
T KOG2467|consen 53 SRAVMEALGSCLTNKYS---EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYS-GSPANFAVYTALL- 127 (477)
T ss_pred HHHHHHHHhHHhhcccc---cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCC-CCchhhHHHhhhc-
Confidence 47788888777766432 2333211 122333333 333334466443333 444444 4577888888888
Q ss_pred CCCCeEEEcC---CcCcchHHHHHHhCCe---------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 009517 213 SENDGILCPI---PQYPLYSASIALHGGT---------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (533)
Q Consensus 213 ~~gd~Vlv~~---p~~~~~~~~~~~~g~~---------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~ 280 (533)
.|+++|.-.+ .++-.+- ...-+.+ -.+|.+++. +.-+|.|.||+..... ++|+||-
T Consensus 128 ~Ph~RiMGLDLP~GGHLsHG--y~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~f-----rPk~iia---- 195 (477)
T KOG2467|consen 128 KPHERIMGLDLPSGGHLSHG--YQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLEKTATLF-----RPKLIIA---- 195 (477)
T ss_pred CCCCeeeeccCCCCCccccc--cccCCceeeeeeeecccCceeeCCC-CCceehHHHHHHHHhc-----CCcEEEe----
Confidence 7999877433 3333221 1111111 123445544 4458999999988876 7888772
Q ss_pred CCCccCCCHHH-HHHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC
Q 009517 281 NPTGQVLAEEN-QRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (533)
Q Consensus 281 NPtG~~~s~~~-l~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ 358 (533)
.+..|++.. ..++.++|.+-|.++++|.++ ++++-.+..+ +.+. +-| |+..+..|++ -|-
T Consensus 196 --G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vip--sPFe--------y~D---iVTTTTHKsL---RGP 257 (477)
T KOG2467|consen 196 --GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIP--SPFE--------YCD---IVTTTTHKSL---RGP 257 (477)
T ss_pred --ccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCC--Cccc--------ccc---eeeccccccc---cCC
Confidence 223455443 778888899999999999998 5666554322 2112 234 7788999987 487
Q ss_pred eeEEEEEecC--------CHHH----HHHHHHh-h-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHH
Q 009517 359 RGGYMEVTGF--------SAEV----REQIYKV-A-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (533)
Q Consensus 359 riG~v~~~~~--------~~~~----~~~l~~~-~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (533)
|.|.|...-. .+++ -+.+.-. . ..-.+|.-....+++.+|.... ... .+.-.++..+
T Consensus 258 Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~--tpe-------fk~Yq~qV~~ 328 (477)
T KOG2467|consen 258 RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPE-------FKEYQKQVLK 328 (477)
T ss_pred cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC--CHH-------HHHHHHHHHH
Confidence 8777654210 0121 1222111 0 1223444444444444554322 122 2334455667
Q ss_pred HHHHHHHHHhcCCCceEecCC-ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC----CCCC
Q 009517 425 RAKTLEDAFNSLEGITCNKAE-GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ----VPGT 499 (533)
Q Consensus 425 ~~~~l~~~L~~~~g~~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~----~~g~ 499 (533)
+.+.|.+.|.+. |.+++... ....+.+++... |. +-..+++.|+.-+|.+.--..+|. .++
T Consensus 329 Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~----------G~--dGarvE~vle~~~I~~NKNtvpGD~Sal~Pg- 394 (477)
T KOG2467|consen 329 NAKALASALISR-GYKLVTGGTDNHLVLVDLRPK----------GV--DGARVEKVLELCHIALNKNTVPGDKSALSPG- 394 (477)
T ss_pred HHHHHHHHHHHc-CceEecCCccceEEEEecccc----------CC--chHHHHHHHHHhhhhhcCCcCCCCccccCCC-
Confidence 778888998888 88877543 333344455411 22 222355677777777654444432 233
Q ss_pred ceEEEEe-c-----CCcCcHHHHHHHHHHHHH
Q 009517 500 WHFRCTI-L-----PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 500 ~~iRis~-~-----~~~e~i~~~~~~l~~~l~ 525 (533)
.|||.. + .-++++++..+-|.++++
T Consensus 395 -GiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 395 -GIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred -ceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 799976 2 456778888877777665
No 390
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.02 E-value=0.00027 Score=65.54 Aligned_cols=238 Identities=14% Similarity=0.124 Sum_probs=121.9
Q ss_pred HHHHHHHHhhcCCCCCCCCEEE-cCChHHHHHHHHHHhcc-CCC-CeEEEcCCcCcchHHHHHHhCCeEEEEec-CCCCC
Q 009517 174 DTIAAGIEARDGFPADPNDIFL-TDGASPAVHMMMQLLIR-SEN-DGILCPIPQYPLYSASIALHGGTLVPYYL-DEATG 249 (533)
Q Consensus 174 ~aia~~~~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~-~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~ 249 (533)
..+++..-...|...-..-+++ ...++ .+.+.+..++. .|. ..|+.+.-.-..-....-.+|.+++.+.- .+.+.
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgm-slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~ 138 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGM-SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDE 138 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccc-cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchH
Confidence 3344433333454443333332 33332 34445555431 343 44554443333333344457887766542 22222
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHH
Q 009517 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (533)
Q Consensus 250 ~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~ 329 (533)
.--|++.+++.+++. ....|+..+-....=..-+++.+++|+.+|..|++.-|+..+|.- .......-+ ..
T Consensus 139 l~tdleav~~~iee~-----g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnaygl---qsee~i~~i-aa 209 (432)
T KOG3843|consen 139 LITDLEAVEAIIEEL-----GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL---QSEECIHKI-AA 209 (432)
T ss_pred HHHhHHHHHHHHHHh-----CCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccccc---chHHHHHHH-HH
Confidence 334889999988885 344443333332223345678899999999999999999999963 111111111 11
Q ss_pred HhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhH
Q 009517 330 SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESY 408 (533)
Q Consensus 330 ~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~ 408 (533)
..+.+.+ | .+++|+-|+|. .++|-.+....++..++.+.+... ..+..+ +...+..+|..+ ...|
T Consensus 210 ~~~~gri--d---a~vqsldknf~----vpvggaiia~fk~n~iq~iak~ypgrasa~p--s~dllitll~~g---qn~f 275 (432)
T KOG3843|consen 210 AAECGRI--D---AFVQSLDKNFM----VPVGGAIIAAFKDNFIQEIAKMYPGRASASP--SLDLLITLLSLG---QNAF 275 (432)
T ss_pred HhhhccH--H---HHHHHhhhcce----eecchhHhhHhHHHHHHHHHHhCCCccccCc--cHHHHHHHHHhc---hhHH
Confidence 2222211 1 45899999983 445543332346667777766553 223333 333344444433 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 409 ESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
.+...+.++|.-.++.+...+.+...+
T Consensus 276 ~e~~~eqkemf~~l~~ki~~~ae~~~e 302 (432)
T KOG3843|consen 276 KELFGEQKEMFLKLRNKIIKFAEAIGE 302 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 444444555555444444445555444
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.85 E-value=0.0052 Score=68.46 Aligned_cols=232 Identities=13% Similarity=0.124 Sum_probs=128.5
Q ss_pred CCeEEEcCCcCcchHHHHHH----hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 215 NDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
..+|+++.-.++.+...++. .|.+++. +++++.+.. ++.+|++.+|+. .|.+.
T Consensus 168 ~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~------~~~~v~vq~P~~-~G~i~--- 224 (954)
T PRK12566 168 SNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAH------AVFGALLQYPDT-HGEIR--- 224 (954)
T ss_pred CCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCC------CEEEEEEECCCC-ceEEc---
Confidence 46899999999887765543 4555543 233333322 688899999985 68874
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEe---cCCccCCCCCCCeeEEEEEec
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ---SVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~---S~SK~~~gl~G~riG~v~~~~ 367 (533)
++++|.++++++|.++|+- +. -+..+.-. +. -++ ..| |+++ +|+=-+ |..|=-.||+.+
T Consensus 225 d~~~i~~~~h~~gal~~~~-~d-~laL~ll~---~P----ge~---GAD---I~vG~~Q~fGvp~-~~GGP~ag~~a~-- 286 (954)
T PRK12566 225 DLRPLIDQLHGQQALACVA-AD-LLSLLVLT---PP----GEL---GAD---VVLGSTQRFGVPM-GYGGPHAAYFAC-- 286 (954)
T ss_pred cHHHHHHHHHHcCCEEEEE-eC-HHHHhCCC---Ch----hhc---CCc---EEeeCCCcCCCCC-CCCCCCeeeeee--
Confidence 4999999999999886632 21 11121111 11 112 234 5454 333333 223555788877
Q ss_pred CCHHHHHHHH----------------------------Hhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHH--HHHHH
Q 009517 368 FSAEVREQIY----------------------------KVAS-VNLCSNISGQILASLVMSPPKVGDESYESY--CAERD 416 (533)
Q Consensus 368 ~~~~~~~~l~----------------------------~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~--~~~~~ 416 (533)
.++++.++- +-+. +..|.+..-.+.++.+ |..+ -+-++
T Consensus 287 -~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~----------Y~~~~Gp~Gl~ 355 (954)
T PRK12566 287 -RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGF----------YAVYHGPEGLK 355 (954)
T ss_pred -hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHH----------HHHHhChHHHH
Confidence 555554331 1111 1123322222222211 1111 13366
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
++.++...+..++.+.|.+. |++.... .||=.+.+... . ...... ....+.||-++-
T Consensus 356 ~ia~~~~~~a~~l~~~l~~~-g~~~~~~--~fF~~~~v~~~-----------~-~~~~~~-~~a~~~~~n~r~------- 412 (954)
T PRK12566 356 RIAQRVHRLTAILAAGLEAK-GIKRLNR--HFFDTLTLEVG-----------G-AQAAII-ESAEAARINLRI------- 412 (954)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCccccC--CccceEEEEcc-----------C-CHHHHH-HHHHHCCCeeEE-------
Confidence 77777888888999999985 8776433 44433333321 0 122223 445567888773
Q ss_pred CCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 497 PGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 497 ~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
-+.+.+.||+. .+.++++.+++.+.
T Consensus 413 ~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 413 LGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred eCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 12237888985 77788888888874
No 392
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.30 E-value=0.056 Score=51.67 Aligned_cols=132 Identities=17% Similarity=0.124 Sum_probs=92.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC---CeEEEcCCcCcc----hHHHHHHhCCeEE-
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN---DGILCPIPQYPL----YSASIALHGGTLV- 240 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g---d~Vlv~~p~~~~----~~~~~~~~g~~~~- 240 (533)
......-++..++ ...++|.+.++-+--+..++..+. +|. -+|++..-.|+. ....++.+|..+.
T Consensus 113 De~il~l~~~iVG------A~e~EvavmNsLTvNlh~Ll~sFy-KPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~ 185 (465)
T KOG3846|consen 113 DEPILPLLAPIVG------AQENEVAVMNSLTVNLHSLLISFY-KPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPEN 185 (465)
T ss_pred chhhhhhhhhhcc------CCchhhhhHhhhhhHHHHHHHHhc-CCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHH
Confidence 3444444555543 567789999999999999999987 564 358888777765 3456677787632
Q ss_pred ---EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 241 ---PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 241 ---~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
.+.-.+. .-.+..+++.+.|+.. |.....|++.-.+.-||..++ +.+|...-+..|+++=+|-+++-
T Consensus 186 sm~~iePREG-EetlRteDILd~IEkn---gDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv 255 (465)
T KOG3846|consen 186 SMIQIEPREG-EETLRTEDILDTIEKN---GDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV 255 (465)
T ss_pred heEEeccccc-ccchhHHHHHHHHHhc---CCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh
Confidence 2322221 1245678888888764 556777777788999999998 88887666667999999988763
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.98 E-value=0.053 Score=51.29 Aligned_cols=316 Identities=14% Similarity=0.109 Sum_probs=158.9
Q ss_pred CHHHHHHHHHHHhcCCCCC--ccc--cCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCC
Q 009517 141 SADSIERAWQILDQIPGRA--TGA--YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~--~~~--Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~g 215 (533)
|.+|+..+.+-+-+..+.+ ..+ .-+.+ ...+.+.....+.+.++++-+.+-+++-.|++.-...+...+.. +.|
T Consensus 19 p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~-f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g 97 (370)
T KOG2790|consen 19 PESVLLEAQKDLLNFNGSGISVMEMSHRSKD-FAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHG 97 (370)
T ss_pred CHHHHHHHHHHhhccCCCcceEEEecccchh-HHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccC
Confidence 7888888877665543211 111 11222 34445555555555566554444456666777766666555542 233
Q ss_pred ---CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCC--CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 216 ---DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWG--LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 216 ---d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~--ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
|.|+.-..+--.+..+-+......+..+..+. +|+ +|.+.++.. ++.+.+++|.-..--|+-++.
T Consensus 98 ~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y-~ygkvPd~~~w~~~--------~da~yvyyCaNETVHGVEf~~- 167 (370)
T KOG2790|consen 98 RCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSY-TYGKVPDPSTWELN--------PDASYVYYCANETVHGVEFDF- 167 (370)
T ss_pred CccceEEeccccHHHHHHHHhhCCceEEecccccc-ccCcCCChhhcccC--------CCccEEEEecCceeeceecCC-
Confidence 55664443333455444443444444444432 232 455555442 245567776433333554331
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+- +-.-++.+++.|-...-+.. | .++.. . -+++.+..|++ |++|+-+=.+ .+
T Consensus 168 ----~P-~~~~~~~vlVaDmSSnflSr----p-vDvsk----------~--gvi~aGAQKN~-G~aG~Tvviv-----r~ 219 (370)
T KOG2790|consen 168 ----IP-VNDPKGAVLVADMSSNFLSR----P-VDVSK----------F--GVIFAGAQKNV-GPAGVTVVIV-----RK 219 (370)
T ss_pred ----CC-CCCCCCceEEEecccchhcC----C-ccchh----------c--ceEEecccccc-CccccEEEEE-----eh
Confidence 10 12335788888865543221 1 11111 1 25577889999 8888755333 66
Q ss_pred HHHHHHHHhh-------------hccccCChHHHHHHHHHcCCCCCCChhHHHHHHH---HHHHHHHHHHHHHHHHHHHh
Q 009517 371 EVREQIYKVA-------------SVNLCSNISGQILASLVMSPPKVGDESYESYCAE---RDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 371 ~~~~~l~~~~-------------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++....... +.+-.++.++.++.-..++ |+.+ +..+.+.-.++.+.+++.+.
T Consensus 220 dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~-----------~il~~GGl~a~e~~n~~KskllYd~iD 288 (370)
T KOG2790|consen 220 DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFE-----------WILEKGGLAAMEKLNQEKSKLLYDAID 288 (370)
T ss_pred hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHH-----------HHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 6664433221 1222344455454443332 2221 45556666777889999998
Q ss_pred cCCCceEec--C--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cC
Q 009517 435 SLEGITCNK--A--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LP 508 (533)
Q Consensus 435 ~~~g~~~~~--~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~ 508 (533)
+-.|+...+ | +.-|.+..++. +++ -+.+|..+..+++=|.+. |. ..-+.||-|+ ++
T Consensus 289 ~s~gfy~cpVe~~~RS~MNV~Fri~-~d~-----------Le~eFLkeA~~~~mv~LK-Gh-----RSVGGiRASlYNAi 350 (370)
T KOG2790|consen 289 NSNGFYRCPVEPSVRSRMNVPFRIE-KDE-----------LEAEFLKEAAKEHMVQLK-GH-----RSVGGIRASLYNAI 350 (370)
T ss_pred hcCCeEEcccchhhhhhcccceeec-chH-----------HHHHHHHHHHHhhhhccc-cc-----cccccchhhhhccc
Confidence 765654332 2 23344443333 111 245566666655444443 21 1122689998 47
Q ss_pred CcCcHHHHHHHHHHHH
Q 009517 509 QEDKIPAIVTRLTDFH 524 (533)
Q Consensus 509 ~~e~i~~~~~~l~~~l 524 (533)
+-++.+++++-|+++.
T Consensus 351 sv~~~q~L~~~m~~F~ 366 (370)
T KOG2790|consen 351 SVEEVQKLAAFMKEFQ 366 (370)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 7777555554444443
No 394
>PLN02672 methionine S-methyltransferase
Probab=96.91 E-value=0.028 Score=64.16 Aligned_cols=219 Identities=11% Similarity=0.053 Sum_probs=134.5
Q ss_pred HHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc-
Q 009517 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ- 224 (533)
Q Consensus 146 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~- 224 (533)
..+...++.. +..-|.++.|...+|..||.|+...+++++++++|++.++-..|++.+++.+. |-=.++-..-+
T Consensus 408 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 482 (1082)
T PLN02672 408 AYLASALKGL---SYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFS--PRLAIVDEHLTR 482 (1082)
T ss_pred HHHHHHHccC---CCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhC--hHHHhhhhhhhc
Confidence 3344445442 46778999999999999999999999999999999999999999999999874 31111101111
Q ss_pred Cc--chHHHHHHhC--------CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 225 YP--LYSASIALHG--------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 225 ~~--~~~~~~~~~g--------~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
|- -|...+...| .++..+.... ..+.+.+.|++. ++++|+..-.+ +-..+-...+.
T Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~ 548 (1082)
T PLN02672 483 WLPKKWLTSLAIENATSDSKSDDVITVIEAPR------QSDLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFEH 548 (1082)
T ss_pred cCCHHHHhHhhhhcccccCccCCeEEEEeCCC------cchHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHHH
Confidence 11 1233333333 1222221110 124677777775 78888755433 22345566899
Q ss_pred HHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 295 IVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
|.+.+++.|.+++.|..- -++. +......+..++..-. .|. +..++.++-|+- --+.+-+.+++. .++.+.
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~ 620 (1082)
T PLN02672 549 LLNVTAEIGARLFLDISDHLELS--SLPGSNGVLKYLAGHP--LPS-HAAIICGLVKNQ-VYSDLEVAFVIS--ENEAVL 620 (1082)
T ss_pred HHHHHHhhCcEEEEehhhheeec--cCCCcccHHHHhcCCC--CCc-chhHhhhhhhcc-ccccceEEEEec--CcHHHH
Confidence 999999999999999763 3322 2111122223322110 122 345577888875 457899999986 577777
Q ss_pred HHHHHhhh-ccccCChHHH
Q 009517 374 EQIYKVAS-VNLCSNISGQ 391 (533)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q 391 (533)
..+.+... .......++|
T Consensus 621 ~~~~~~~~~~~~~~~~~~~ 639 (1082)
T PLN02672 621 KALSKTGEVLEGRTAIISQ 639 (1082)
T ss_pred HHHHHHHHhhccchHHHHH
Confidence 77766543 3334444444
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.18 E-value=1.5 Score=46.45 Aligned_cols=141 Identities=21% Similarity=0.281 Sum_probs=100.3
Q ss_pred ccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHHH---HHHHhccCCC----CeEEEcCCcCcch
Q 009517 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVHM---MMQLLIRSEN----DGILCPIPQYPLY 228 (533)
Q Consensus 160 ~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~-G~~~al~~---~~~~l~~~~g----d~Vlv~~p~~~~~ 228 (533)
.+-|.| .+|+.++-+.+.+++...-| .|++.+-+ ++.++-+. ++++.....| ...++|.-.+...
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN 643 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeec----ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC
Confidence 455665 46888888888888876533 55665543 33333222 3333321233 2467788888888
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
...+..+|.++++|.++..+ .+|..+|++..+++.. +..++.++.|+. -|+. ++.+++++++.++||--|..
T Consensus 644 PASA~MagmkvvpV~~~~~G--~id~~dLk~kaekh~~---~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYl 715 (1001)
T KOG2040|consen 644 PASAAMAGMKVVPVGCDANG--NIDMVDLKAKAEKHKD---NLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYL 715 (1001)
T ss_pred hhhHHhcCCEEEEeeccCCC--CccHHHHHHHHHHhhh---hhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEe
Confidence 88899999999999988654 7899999998877633 678899999974 2433 35599999999999999999
Q ss_pred cccc
Q 009517 309 DEVY 312 (533)
Q Consensus 309 De~y 312 (533)
|.+-
T Consensus 716 DGAN 719 (1001)
T KOG2040|consen 716 DGAN 719 (1001)
T ss_pred cCCC
Confidence 9764
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=88.90 E-value=37 Score=36.59 Aligned_cols=87 Identities=16% Similarity=0.251 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh----CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEE
Q 009517 199 ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRAL 274 (533)
Q Consensus 199 ~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~i 274 (533)
+.||+.++.+. ..+.+.++..-+|+.....++-. |.++.. .|+++.... .+++..+
T Consensus 192 aaEAm~l~~~~---~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~----------~~~~~~~~s-------~~~v~gv 251 (1001)
T KOG2040|consen 192 AAEAMALCNRI---NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVV----------SDIKEADYS-------SKDVSGV 251 (1001)
T ss_pred HHHHHHHHHhh---cccceEEecCCCCcchhhhhhccccccceeEEe----------cCHHHhhcc-------ccceeEE
Confidence 33444444433 45667999999998776655431 222111 122222221 1257788
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 275 il~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
++..|.. -|.+.+ +.++++++++.+.++++-
T Consensus 252 lvQYP~t-~G~i~d---~~el~~~a~~~~s~vv~a 282 (1001)
T KOG2040|consen 252 LVQYPDT-EGSVLD---FDELVELAHANGSLVVMA 282 (1001)
T ss_pred EEEcCCC-CCcccC---HHHHHHHhhccCceEEEe
Confidence 8888875 477777 888888999988776653
No 397
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=87.86 E-value=16 Score=35.37 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=70.3
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCC--eEEEcC--CcCcchHHHHHH--hCCeEEEEecCCCCCCCCCHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSEND--GILCPI--PQYPLYSASIAL--HGGTLVPYYLDEATGWGLETSEVKKQL 261 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd--~Vlv~~--p~~~~~~~~~~~--~g~~~~~v~~~~~~~~~ld~~~l~~~i 261 (533)
+..++|++|.|.+.-+..++..+. +.|. .|++.+ |.+.++..+... +|++...++ ..++-+.+
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~-kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~----------daaVfA~M 228 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAA-KKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP----------DAAVFAMM 228 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHH-hccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec----------cHHHHHHh
Confidence 345789999999999999999887 4543 355544 666665554444 466655554 23444555
Q ss_pred HHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 009517 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEV 311 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~ 311 (533)
.+ --|+|+-.+.--+-|-+....-...++..|++|-+.+|+=.-
T Consensus 229 sr------VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 229 SR------VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred hh------cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 54 245666566544445566666778888889999888776443
No 398
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=84.70 E-value=11 Score=34.96 Aligned_cols=100 Identities=23% Similarity=0.324 Sum_probs=70.5
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEE-----EcC-C-cC----cch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGIL-----CPI-P-QY----PLY---SASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vl-----v~~-p-~~----~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+.+-+||.....++..++. .|..|. .|. + +| ++. ...++..|..++....... ..-..++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~--~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLALE--EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHHH--cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 6778999999888887773 453321 121 2 12 121 2345667888888777642 234688899
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
++++.. +..+|+ +|.+++..+...+-.+|++-|+.++.
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~ 117 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKVYA 117 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee
Confidence 999875 566787 89999999999999999999987654
No 399
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=82.00 E-value=26 Score=34.51 Aligned_cols=59 Identities=19% Similarity=0.300 Sum_probs=37.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+..++.++++..++...+.-.+...|++ +-+=|-| ++.+...+|+++|++.|..+++|.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvl-sGSlP~g--~~~d~y~~li~~~~~~g~~vilD~ 166 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVL-SGSLPPG--VPPDAYAELIRILRQQGAKVILDT 166 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEE-eCCCCCC--CCHHHHHHHHHHHHhcCCeEEEEC
Confidence 3456666666655554321112333443 4444444 457889999999999999999994
No 400
>PRK08265 short chain dehydrogenase; Provisional
Probab=81.72 E-value=21 Score=34.14 Aligned_cols=100 Identities=14% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.+. +.|..|++..-.-..........+.++..++.|-. |.+.+++.++...+.-.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALV-AAGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 456666655555555566666 67877777654333333444445666667766533 677777777654332224
Q ss_pred eeEEEEeCC-CCCCccCCCHHHHHHHH
Q 009517 271 VRALVVINP-GNPTGQVLAEENQRAIV 296 (533)
Q Consensus 271 ~~~iil~~p-~NPtG~~~s~~~l~~i~ 296 (533)
...++.+.. ..+.+...+.+++++..
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~ 107 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAAL 107 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHH
Confidence 555543321 22233445555555543
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=78.96 E-value=14 Score=34.67 Aligned_cols=96 Identities=17% Similarity=0.211 Sum_probs=55.6
Q ss_pred EEEcC-ChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 193 IFLTD-GASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 193 i~~t~-G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
|+++. .|..+ ..+++.|. ..+ ...++..+.-......++..|++++..+++ |.+.|.++++.
T Consensus 1 I~V~GatG~~G-~~v~~~L~-~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g------- 64 (233)
T PF05368_consen 1 ILVTGATGNQG-RSVVRALL-SAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG------- 64 (233)
T ss_dssp EEEETTTSHHH-HHHHHHHH-HTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT-------
T ss_pred CEEECCccHHH-HHHHHHHH-hCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC-------
Confidence 33443 34444 44455555 355 333334444223345567789998766544 78999999974
Q ss_pred eeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 271 ~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
..+|+++.+... ....+.-+.+++.|++.|+-.+
T Consensus 65 ~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 65 VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEE
T ss_pred CceEEeecCcch---hhhhhhhhhHHHhhhccccceE
Confidence 556666655432 2334567889999999886444
No 402
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=76.46 E-value=36 Score=31.96 Aligned_cols=100 Identities=22% Similarity=0.264 Sum_probs=67.0
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEE----cCC--c--Cc--c---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHH
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILC----PIP--Q--YP--L---YSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv----~~p--~--~~--~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~ 259 (533)
+++-+||.....++.++.. + -+.+.+ +.. . |+ + ....++..|..++.++.... ..--.+++.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALK-E-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHH-h-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHH
Confidence 4677999999988888775 4 333222 111 1 22 1 23456677988877665422 2224567777
Q ss_pred HHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 260 ~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
++++. ++.+|+ +|.+.+..+...+-++|.+-|+..+.
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~~ 116 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSFA 116 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEec
Confidence 77764 466676 89999999999999999999887654
No 403
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=73.36 E-value=31 Score=30.07 Aligned_cols=100 Identities=11% Similarity=0.086 Sum_probs=57.8
Q ss_pred EEEcCChHHHHHHHHHHhccCCCC-eEEEcCCc--CcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 193 IFLTDGASPAVHMMMQLLIRSEND-GILCPIPQ--YPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd-~Vlv~~p~--~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
+++|.|+...-..+.+.+. ..|. .|++.... ...... .+...+.++..+++|-. +.+.+++.++....
T Consensus 3 ~lItGa~~giG~~~a~~l~-~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALA-RRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-----DPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-----SHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHH-hcCceEEEEeeeccccccccccccccccccccccccccccc-----cccccccccccccc
Confidence 5666666555555666666 4554 55555444 233332 33446788888887743 78888888877654
Q ss_pred cCCCeeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPTGQ--VLAEENQRAIVDF 298 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPtG~--~~s~~~l~~i~~l 298 (533)
...+...+|.+....+.+. ..+.+++++..+.
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhcccc
Confidence 4446777776644333333 3345556655543
No 404
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=70.72 E-value=19 Score=30.40 Aligned_cols=76 Identities=17% Similarity=0.249 Sum_probs=52.5
Q ss_pred EEEcCCcCcchHHHHHHhC---------CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe--CC---CCCC
Q 009517 218 ILCPIPQYPLYSASIALHG---------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI--NP---GNPT 283 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g---------~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~--~p---~NPt 283 (533)
|++..=.|..|.. +..+| .+++.+|... .+|+..+.+++.. ....|++. +| |...
T Consensus 2 Il~F~C~~~ay~a-ad~ag~~~~~~p~~vriIrvpC~G----rv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~ 70 (124)
T PF02662_consen 2 ILAFCCNWCAYAA-ADLAGVSRLQYPPNVRIIRVPCSG----RVDPEFILRAFEK------GADGVLVAGCHPGDCHYRE 70 (124)
T ss_pred EEEEEeCCCcHHH-HHHHhhccCCCCCCeEEEEccCCC----ccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcch
Confidence 4444445555543 33433 4566666542 7999999999988 56666663 55 5689
Q ss_pred ccCCCHHHHHHHHHHHHHcCC
Q 009517 284 GQVLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 284 G~~~s~~~l~~i~~l~~~~~~ 304 (533)
|.......++.+.++..+.|+
T Consensus 71 Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 71 GNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred hhHHHHHHHHHHHHHHHHcCC
Confidence 999988888888888887764
No 405
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=70.70 E-value=50 Score=30.98 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=64.5
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEcC--C------cCc-----chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHH
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCPI--P------QYP-----LYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~--p------~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~ 259 (533)
+++.+||.....++.++.. . .+.+.+.. | .|+ -....++..|...+.+..... +.--.+++.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~-~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALE-E-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHH-c-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHH
Confidence 4567899998888887765 3 44322221 2 122 123466777988877765431 1223455555
Q ss_pred HHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 260 ~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
.++.. .+.+|+ +|.+.+..+...+-++|.+-|+-.+.
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~~ 116 (222)
T TIGR00289 80 QLGEL-----DVEALC-------IGAIESNYQKSRIDKVCRELGLKSIA 116 (222)
T ss_pred HHHHc-----CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEec
Confidence 55443 466776 89999999999999999999987654
No 406
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=70.45 E-value=72 Score=31.31 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=67.6
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCC--eEEEcC--CcCcchH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSEND--GILCPI--PQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd--~Vlv~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i 261 (533)
+...++++|.|-+.++..++.... +.|. +|++.+ |.+.++. ..++.+|.++..++- .++-..+
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~-~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~D----------sa~~~~~ 185 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAA-DRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVD----------SAVGAFM 185 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhh-hcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEec----------hHHHHHH
Confidence 446689999999888888888886 6665 566644 8887754 345667877766652 2233333
Q ss_pred HHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEE-cccc
Q 009517 262 EAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLA-DEVY 312 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~-De~y 312 (533)
++ +..|++- +.---.|.++++---..|+..|++.+.++++ =|.|
T Consensus 186 ~~-------vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesy 231 (301)
T COG1184 186 SR-------VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESY 231 (301)
T ss_pred Hh-------CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeee
Confidence 33 4444443 3322335666666667788889998876554 3444
No 407
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.52 E-value=78 Score=30.94 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=74.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
+.-+-|++|.||......+..-+. +.|.++++-+ ....... ..++..| ++..|.+|-. |.|++.+..++-
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa-~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~V 108 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFA-KRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKV 108 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHH-HhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHH
Confidence 444567777777666666666665 5676664444 3333322 3333335 6777776643 455555554443
Q ss_pred HhcCCCeeEEEEeCCC---CCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCce
Q 009517 265 KAKGITVRALVVINPG---NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~---NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (533)
+++-.++ -|++||.. .-..-..+++++++..++= + .+. ++....+++.|-. ..++.
T Consensus 109 k~e~G~V-~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN----~-------~~~--------f~t~kaFLP~M~~-~~~GH 167 (300)
T KOG1201|consen 109 KKEVGDV-DILVNNAGIVTGKKLLDCSDEEIQKTFDVN----T-------IAH--------FWTTKAFLPKMLE-NNNGH 167 (300)
T ss_pred HHhcCCc-eEEEeccccccCCCccCCCHHHHHHHHHHh----h-------HHH--------HHHHHHHhHHHHh-cCCce
Confidence 3333233 46667763 2233456777777766532 1 111 2222244444432 35667
Q ss_pred EEEEecCCccCCCCCC
Q 009517 342 LVSFQSVSKGYYGECG 357 (533)
Q Consensus 342 vi~i~S~SK~~~gl~G 357 (533)
++.+.|..=-+ |.+|
T Consensus 168 IV~IaS~aG~~-g~~g 182 (300)
T KOG1201|consen 168 IVTIASVAGLF-GPAG 182 (300)
T ss_pred EEEehhhhccc-CCcc
Confidence 78777764434 4444
No 408
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=66.77 E-value=87 Score=29.18 Aligned_cols=82 Identities=17% Similarity=0.046 Sum_probs=44.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.++...-..+.+.+. +.|..|.+...............+.++..++.|-. |.+.+++.+....+.-.+
T Consensus 7 ~~vlItGa~g~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLH-AQGAIVGLHGTRVEKLEALAAELGERVKIFPANLS-----DRDEVKALGQKAEADLEG 80 (245)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 456666555555555666666 57777766544433333333444555555555532 567777776654332234
Q ss_pred eeEEEEeC
Q 009517 271 VRALVVIN 278 (533)
Q Consensus 271 ~~~iil~~ 278 (533)
..+||-+.
T Consensus 81 id~vi~~a 88 (245)
T PRK12936 81 VDILVNNA 88 (245)
T ss_pred CCEEEECC
Confidence 56665443
No 409
>PRK06194 hypothetical protein; Provisional
Probab=64.44 E-value=1e+02 Score=29.64 Aligned_cols=81 Identities=15% Similarity=0.043 Sum_probs=43.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.+. ..|.+|++.+-.-........ ..+.++..+..|- -|.+.+++.+......
T Consensus 7 k~vlVtGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGA-ALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALADAALER 80 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 456666655555555566666 578777766543222222222 2256676676653 2677777777654322
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
..+...|+-+
T Consensus 81 ~g~id~vi~~ 90 (287)
T PRK06194 81 FGAVHLLFNN 90 (287)
T ss_pred cCCCCEEEEC
Confidence 2245555443
No 410
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=64.37 E-value=83 Score=29.86 Aligned_cols=100 Identities=17% Similarity=0.188 Sum_probs=60.1
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
.|++.+|++.++-.+....+...|-+|++..-.---...++...+ .++....+| --|.+.+++.+......-.+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~D-----VtD~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALD-----VTDRAAVEAAIEALPEEFGR 81 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeec-----cCCHHHHHHHHHHHHHhhCc
Confidence 577777877777665554433678888877666555666666677 456666655 33778877777755333334
Q ss_pred eeEEEEeCCCCCCccC---CCHHHHHHHHH
Q 009517 271 VRALVVINPGNPTGQV---LAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~NPtG~~---~s~~~l~~i~~ 297 (533)
.. ++++|..---|.. ...++|+.+.+
T Consensus 82 iD-iLvNNAGl~~g~~~~~~~~~dw~~Mid 110 (246)
T COG4221 82 ID-ILVNNAGLALGDPLDEADLDDWDRMID 110 (246)
T ss_pred cc-EEEecCCCCcCChhhhCCHHHHHHHHH
Confidence 44 4456654333333 34555665554
No 411
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=63.23 E-value=1.2e+02 Score=29.98 Aligned_cols=147 Identities=16% Similarity=0.170 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhcCCC-CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 142 ADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
.+.++-..+.+.+... .....|....|....-..+++-+. .+...++++.++..|- .++.... +--|++
T Consensus 45 d~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~------~~~~dviv~i~tp~Aq-~~~s~~~---~iPVV~ 114 (322)
T COG2984 45 DAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLV------GDKPDVIVAIATPAAQ-ALVSATK---TIPVVF 114 (322)
T ss_pred HHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhh------cCCCcEEEecCCHHHH-HHHHhcC---CCCEEE
Confidence 4455555566654321 123456677788887778888775 2344677776665553 2233222 223443
Q ss_pred cCCc---CcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEE-EEeCCCCCCccCCCHHHHHHHH
Q 009517 221 PIPQ---YPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRAL-VVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 221 ~~p~---~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~i-il~~p~NPtG~~~s~~~l~~i~ 296 (533)
..-+ -......++.-|..+.-+. + ..+.++-.++++.. -|+.+-| ++.+|+-+ .+...++++.
T Consensus 115 aavtd~v~a~Lv~~~~~pg~NvTGvs--D----~~~v~q~i~lik~~---~Pnak~Igv~Y~p~E~----ns~~l~eelk 181 (322)
T COG2984 115 AAVTDPVGAKLVKSLEQPGGNVTGVS--D----LLPVAQQIELIKAL---LPNAKSIGVLYNPGEA----NSVSLVEELK 181 (322)
T ss_pred EccCchhhccCCccccCCCCceeecC--C----cchHHHHHHHHHHh---CCCCeeEEEEeCCCCc----ccHHHHHHHH
Confidence 3322 2122222333344444332 0 22445444444443 3467777 77788654 4566799999
Q ss_pred HHHHHcCCEEEEccc
Q 009517 297 DFCKKEGLVLLADEV 311 (533)
Q Consensus 297 ~l~~~~~~~lI~De~ 311 (533)
+.+++.|+-+++=-+
T Consensus 182 ~~A~~~Gl~vve~~v 196 (322)
T COG2984 182 KEARKAGLEVVEAAV 196 (322)
T ss_pred HHHHHCCCEEEEEec
Confidence 999999999986543
No 412
>smart00642 Aamy Alpha-amylase domain.
Probab=62.48 E-value=35 Score=30.36 Aligned_cols=60 Identities=20% Similarity=0.297 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCC-CCCC------c-----------cCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINP-GNPT------G-----------QVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p-~NPt------G-----------~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
|++.+.+.+...++- ...+|.+..+ .++. | ..=+.++++++++.|+++|+-||.|-+...
T Consensus 17 ~~~gi~~~l~yl~~l--G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 17 DLQGIIEKLDYLKDL--GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHC--CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 567766665533333 4566766644 2221 1 112568899999999999999999987764
No 413
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=62.47 E-value=88 Score=32.60 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCC-----------CCCCCCEEEcCChHHHHHHHHHHhc
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGF-----------PADPNDIFLTDGASPAVHMMMQLLI 211 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~-----------~~~~~~i~~t~G~~~al~~~~~~l~ 211 (533)
..++.+...+...+ ..-+...+-.+|.+.|-+|+...... .+....+++|-|.+..+..++....
T Consensus 305 NAiRflK~eI~~L~----~s~~e~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~ 380 (556)
T KOG1467|consen 305 NAIRFLKNEISKLP----ISLSESEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAK 380 (556)
T ss_pred HHHHHHHHHHhhCC----CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHH
Confidence 34444444554432 12334555667777777776654432 2455688999999998888877764
Q ss_pred cCCCC---eEEE-cCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 212 RSEND---GILC-PIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 212 ~~~gd---~Vlv-~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
.-|. .|++ ..|.+-+ ....+...|.++.++-+.. +--...+ -+++++=.|.----|.
T Consensus 381 -~~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a----------~syim~e------vtkvfLGahailsNG~ 443 (556)
T KOG1467|consen 381 -ELGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINA----------ASYIMLE------VTKVFLGAHAILSNGA 443 (556)
T ss_pred -HhCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehh----------HHHHHHh------cceeeechhhhhcCcc
Confidence 3332 2333 3366665 3345566788877766542 1122222 3455544465334489
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEE-ccccc
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLA-DEVYQ 313 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~-De~y~ 313 (533)
+|++.--..|+=+++.+|+.||+ =|.|-
T Consensus 444 vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 444 VYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred hhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 99988888888889999996664 35553
No 414
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=62.27 E-value=1.2e+02 Score=28.41 Aligned_cols=103 Identities=21% Similarity=0.288 Sum_probs=63.7
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEE-E-c-CC------cCc-----chHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGIL-C-P-IP------QYP-----LYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vl-v-~-~p------~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++.+||.....++..+.. .|..|. + . .+ .++ .....++..|++...+.++... ....+.+.
T Consensus 1 ~vl~SGGkDS~~al~~a~~--~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~--~~~~~~l~ 76 (218)
T TIGR03679 1 AALYSGGKDSNYALYKALE--EGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEK--EKEVEDLK 76 (218)
T ss_pred CeeecCcHHHHHHHHHHHH--cCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCC--hHHHHHHH
Confidence 3567888888877776653 565542 2 2 12 112 1234566778888877765211 12345677
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
++++..... ....|+ +|.+.+..+...+-++|.+.|+.++.
T Consensus 77 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~~ 117 (218)
T TIGR03679 77 GALKELKRE--GVEGIV-------TGAIASRYQKSRIERICEELGLKVFA 117 (218)
T ss_pred HHHHHHHHc--CCCEEE-------ECCcccHhHHHHHHHHHHhCCCeEEe
Confidence 777765444 355666 68888877777777899888876543
No 415
>PRK10595 SOS cell division inhibitor; Provisional
Probab=61.82 E-value=1.2e+02 Score=27.00 Aligned_cols=101 Identities=16% Similarity=0.149 Sum_probs=61.7
Q ss_pred CEEEc---CChHH-HHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEE---EEecCCCCCCCCCHHHHHHHHHHH
Q 009517 192 DIFLT---DGASP-AVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLV---PYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 192 ~i~~t---~G~~~-al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~---~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
+|+.. .|-.+ .+.=+++.+. ..+.-|+.-.|-+..+...+...|.... .+..... .-.+..+|++++.
T Consensus 30 Ell~~~~qpg~~e~LLlP~L~~l~-~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~---~d~Lwa~EqaLrs- 104 (164)
T PRK10595 30 ELVYREDQPMMTQLLLLPLLQQLG-QQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSP---CHTVEAMERALRT- 104 (164)
T ss_pred EEeecCCCchHHHHHHHHHHHHHh-ccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCc---HHHHHHHHHHHhh-
Confidence 45553 45455 4444444444 4566788888889999999999998643 3432211 1135667777776
Q ss_pred HhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 009517 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~l 306 (533)
| ...+|+.--|+. ++.+++++|--.|++-+.+.
T Consensus 105 ---G-~~~aVL~Wlp~~-----l~~~~~RRLQlAAe~g~~l~ 137 (164)
T PRK10595 105 ---G-NYSVVLGWLPDE-----LTEEEHARLVDAAQEGNAMG 137 (164)
T ss_pred ---C-CCcEEEECCccc-----CCHHHHHHHHHHHHhCCCEE
Confidence 2 445555434432 56788899887777666543
No 416
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=61.24 E-value=1.1e+02 Score=28.83 Aligned_cols=81 Identities=14% Similarity=0.044 Sum_probs=46.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.+. ..|.+|++....-..........+.++..+..|- -|.+.+++.++...+.-.+
T Consensus 7 ~~vlItGas~~iG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYL-AEGARVVIADIKPARARLAALEIGPAAIAVSLDV-----TRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666655555555666665 5787887776554444444444455566666553 3677777777664333335
Q ss_pred eeEEEEe
Q 009517 271 VRALVVI 277 (533)
Q Consensus 271 ~~~iil~ 277 (533)
..+++.+
T Consensus 81 id~li~~ 87 (257)
T PRK07067 81 IDILFNN 87 (257)
T ss_pred CCEEEEC
Confidence 5666544
No 417
>PRK06500 short chain dehydrogenase; Provisional
Probab=61.23 E-value=1.2e+02 Score=28.34 Aligned_cols=81 Identities=14% Similarity=0.056 Sum_probs=42.9
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.++...-..+.+.+. +.|.+|++..-.-..........|.++..+..+.. |.+.+.+.++...+...+
T Consensus 7 k~vlItGasg~iG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFL-AEGARVAITGRDPASLEAARAELGESALVIRADAG-----DVAAQKALAQALAEAFGR 80 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 346666655555555666666 57777766543322233334445666666666532 566665555443222224
Q ss_pred eeEEEEe
Q 009517 271 VRALVVI 277 (533)
Q Consensus 271 ~~~iil~ 277 (533)
...++.+
T Consensus 81 id~vi~~ 87 (249)
T PRK06500 81 LDAVFIN 87 (249)
T ss_pred CCEEEEC
Confidence 5555544
No 418
>PRK07063 short chain dehydrogenase; Provisional
Probab=60.45 E-value=1.3e+02 Score=28.47 Aligned_cols=82 Identities=15% Similarity=0.077 Sum_probs=43.1
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH-----hCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL-----HGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~-----~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
...+++|.|+...-..+.+.+. ..|.+|++..-.-......... .+.++..+..|-. |.+.+++.++..
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~-~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~ 80 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFA-REGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAVAAA 80 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHHHHH
Confidence 3456666665555555666666 6787777654332222222222 2455666666532 566776666654
Q ss_pred HhcCCCeeEEEEe
Q 009517 265 KAKGITVRALVVI 277 (533)
Q Consensus 265 ~~~g~~~~~iil~ 277 (533)
.+.-.+...++-+
T Consensus 81 ~~~~g~id~li~~ 93 (260)
T PRK07063 81 EEAFGPLDVLVNN 93 (260)
T ss_pred HHHhCCCcEEEEC
Confidence 3222245555433
No 419
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=60.25 E-value=70 Score=29.90 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=57.8
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEc----C--C--cCcc-----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHH
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCP----I--P--QYPL-----YSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~----~--p--~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~ 259 (533)
+++-+||..+..++.+++. + -+.+.+. . - .|+. ....++..|.+.+.+++.... .--.+++.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALR-Q-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHH-T--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHH-h-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHH
Confidence 5677899999888888775 4 3322211 1 1 1221 345678889999988876221 223577777
Q ss_pred HHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 260 ~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
+++.. ++.+++ +|.+.+.++...+-++|.+.|+-.+.
T Consensus 80 ~l~~~-----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~~ 116 (218)
T PF01902_consen 80 ALKEL-----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEAVF 116 (218)
T ss_dssp HHCTC-------SEEE---------TTS-HHHHHHHHHHHHHCT-EEE-
T ss_pred HHHHc-----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEEe
Confidence 77653 466676 89999999999999999999987764
No 420
>PRK08589 short chain dehydrogenase; Validated
Probab=60.06 E-value=1.4e+02 Score=28.60 Aligned_cols=97 Identities=19% Similarity=0.166 Sum_probs=49.9
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-. ....... ...+.++..+.+|-. |.+.+++.++...+.
T Consensus 7 k~vlItGas~gIG~aia~~l~-~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALA-QEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDIS-----DEQQVKDFASEIKEQ 79 (272)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecC-----CHHHHHHHHHHHHHH
Confidence 346666555555555566666 678787776544 3332222 223556666666532 566776666654322
Q ss_pred CCCeeEEEEeCCC-C-CCcc--CCCHHHHHHH
Q 009517 268 GITVRALVVINPG-N-PTGQ--VLAEENQRAI 295 (533)
Q Consensus 268 g~~~~~iil~~p~-N-PtG~--~~s~~~l~~i 295 (533)
-.+...+| ++.. . +.+. ..+.+.++++
T Consensus 80 ~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~ 110 (272)
T PRK08589 80 FGRVDVLF-NNAGVDNAAGRIHEYPVDVFDKI 110 (272)
T ss_pred cCCcCEEE-ECCCCCCCCCCcccCCHHHHHHH
Confidence 22445444 4442 1 2222 3455555543
No 421
>PRK05872 short chain dehydrogenase; Provisional
Probab=59.81 E-value=1.2e+02 Score=29.63 Aligned_cols=83 Identities=12% Similarity=0.011 Sum_probs=45.2
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
....+++|.|+...-..+.+.+. ..|.+|++..-.-..........+ .++..+.+|- -|.+.+++.+.....
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLH-ARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34456776665555555566665 678777776544333333334333 4555555543 267777777765433
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
...+...+|.+
T Consensus 82 ~~g~id~vI~n 92 (296)
T PRK05872 82 RFGGIDVVVAN 92 (296)
T ss_pred HcCCCCEEEEC
Confidence 22245555533
No 422
>PRK07478 short chain dehydrogenase; Provisional
Probab=59.55 E-value=1.3e+02 Score=28.29 Aligned_cols=81 Identities=14% Similarity=0.044 Sum_probs=43.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-.-...... +...+.++..++.|-. |.+.+++.++...+.
T Consensus 7 k~~lItGas~giG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFA-REGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVR-----DEAYAKALVALAVER 80 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 346666555444445555665 6787777655332222222 2233556767776533 677777777654332
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
..+...++.+
T Consensus 81 ~~~id~li~~ 90 (254)
T PRK07478 81 FGGLDIAFNN 90 (254)
T ss_pred cCCCCEEEEC
Confidence 2245555544
No 423
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=59.52 E-value=1.1e+02 Score=28.85 Aligned_cols=82 Identities=12% Similarity=-0.004 Sum_probs=44.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
..+++|.|+...-..+.+.+. +.|-+|++....-. ......+..+.++..+..|- -|.+.+++.++.....-.
T Consensus 9 k~~lItGas~gIG~aia~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLA-KAGADIVGVGVAEAPETQAQVEALGRKFHFITADL-----IQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC-----CCHHHHHHHHHHHHHHcC
Confidence 445666655555555666666 67877776532211 11222334566777776663 367777777765433222
Q ss_pred CeeEEEEeCC
Q 009517 270 TVRALVVINP 279 (533)
Q Consensus 270 ~~~~iil~~p 279 (533)
+...++ ++.
T Consensus 83 ~iD~lv-~~a 91 (251)
T PRK12481 83 HIDILI-NNA 91 (251)
T ss_pred CCCEEE-ECC
Confidence 455554 444
No 424
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=59.45 E-value=1.5e+02 Score=27.84 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=46.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.+. ..|-+|++..-.-..... .+...|.++..+..|- -|.+.+++.+.....
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLA-QAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDV-----TDHDAVRAAIDAFEA 83 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3467777666555556666666 578777775433222222 2233356677776653 367778777766433
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
...+..+||.+
T Consensus 84 ~~~~~d~li~~ 94 (255)
T PRK07523 84 EIGPIDILVNN 94 (255)
T ss_pred hcCCCCEEEEC
Confidence 33345565544
No 425
>PRK05717 oxidoreductase; Validated
Probab=59.45 E-value=98 Score=29.23 Aligned_cols=81 Identities=16% Similarity=0.003 Sum_probs=43.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.+. ..|.+|++....-.......+..+.++..+..|-. |.+.++++++...+.-.+
T Consensus 11 k~vlItG~sg~IG~~~a~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLI-AEGWQVVLADLDRERGSKVAKALGENAWFIAMDVA-----DEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCC-----CHHHHHHHHHHHHHHhCC
Confidence 446666665555555666666 57777777654332233333444555666666532 567776666554322224
Q ss_pred eeEEEEe
Q 009517 271 VRALVVI 277 (533)
Q Consensus 271 ~~~iil~ 277 (533)
+..++-+
T Consensus 85 id~li~~ 91 (255)
T PRK05717 85 LDALVCN 91 (255)
T ss_pred CCEEEEC
Confidence 5555544
No 426
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=59.44 E-value=1.9e+02 Score=28.68 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC--CeEEEcC--CcCcchHH--HHHHhCCeEEEEe
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPI--PQYPLYSA--SIALHGGTLVPYY 243 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~--p~~~~~~~--~~~~~g~~~~~v~ 243 (533)
...++.|+++-... +....+++|.|-+..+..+++.+. +.| -+|++.+ |...+... .+...|.++..++
T Consensus 104 ~~~~~~I~~~a~~~----i~~g~~ILT~~~S~tv~~~l~~A~-~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~ 178 (310)
T PRK08535 104 ENAVEKIGEIGAKR----IRDGDVIMTHCNSSAALSVIKTAH-EQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIV 178 (310)
T ss_pred HHHHHHHHHHHHHH----cCCCCEEEEeCCcHHHHHHHHHHH-HCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEe
Confidence 34455555555433 445678888887666666666654 333 3456544 55555332 3344577776665
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 244 ~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
- ..+-..+. ++..|++- .---..|.+..+---..++-+|+.+++.+++
T Consensus 179 D----------sav~~~m~-------~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 179 D----------SAVRYFMK-------DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred h----------hHHHHHHH-------hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 2 23333333 35555553 3334556666766677788889999987775
No 427
>PRK05876 short chain dehydrogenase; Provisional
Probab=59.28 E-value=1.3e+02 Score=28.91 Aligned_cols=99 Identities=15% Similarity=0.076 Sum_probs=51.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|..|++..-.-....... ...|.++..+.+|-. |.+.+++.+......
T Consensus 7 k~vlVTGas~gIG~ala~~La-~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFA-RRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR-----HREEVTHLADEAFRL 80 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHHHHHHH
Confidence 456776666555555666666 57877776543222222222 223566766766533 677787777664332
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIV 296 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~ 296 (533)
..++..+| ++.. ...| ...+.++++++.
T Consensus 81 ~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~ 111 (275)
T PRK05876 81 LGHVDVVF-SNAGIVVGGPIVEMTHDDWRWVI 111 (275)
T ss_pred cCCCCEEE-ECCCcCCCCCcccCCHHHHHHHH
Confidence 23455544 4432 1112 234555555443
No 428
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=59.03 E-value=32 Score=33.71 Aligned_cols=72 Identities=8% Similarity=0.188 Sum_probs=41.8
Q ss_pred CcCcchHHHHHH--hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 223 PQYPLYSASIAL--HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 223 p~~~~~~~~~~~--~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
|+|....++-.. ...-++.+|.. .-++.+++..+. .+|++++.+-.- +.++-++|.++|+
T Consensus 52 ~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~------gvk~avI~s~Gf------~~~~~~~l~~~a~ 113 (291)
T PRK05678 52 PVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDA------GIDLIVCITEGI------PVLDMLEVKAYLE 113 (291)
T ss_pred eccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHHHH
Confidence 445555555443 33344444422 124555555554 577766665442 2444568999999
Q ss_pred HcCCEEEEcccc
Q 009517 301 KEGLVLLADEVY 312 (533)
Q Consensus 301 ~~~~~lI~De~y 312 (533)
++|+.++==.+.
T Consensus 114 ~~girvlGPNc~ 125 (291)
T PRK05678 114 RKKTRLIGPNCP 125 (291)
T ss_pred HcCCEEECCCCC
Confidence 999999854444
No 429
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=58.88 E-value=97 Score=27.83 Aligned_cols=46 Identities=28% Similarity=0.555 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 251 GLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 251 ~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
.+|.+++++.++..+.+|.+.-+|.+. ++-|| +.=+++.+++++.|
T Consensus 130 ~ld~~~v~~~~~~l~~~gv~avAV~~~fS~~np-------~hE~~v~eii~e~g 176 (176)
T PF05378_consen 130 PLDEDEVREALRELKDKGVEAVAVSLLFSYRNP-------EHEQRVAEIIREEG 176 (176)
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECccCCCCH-------HHHHHHHHHHHhcC
Confidence 368899999998887665444344333 44554 34455666666653
No 430
>PRK07024 short chain dehydrogenase; Provisional
Probab=58.64 E-value=1.2e+02 Score=28.68 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=41.7
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~--~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
.+++|.|+...-..+.+.+. +.|..|++..-.............. ++..+.+|-. |.+.+++.++.......
T Consensus 4 ~vlItGas~gIG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 4 KVFITGASSGIGQALAREYA-RQGATLGLVARRTDALQAFAARLPKAARVSVYAADVR-----DADALAAAAADFIAAHG 77 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCC-----CHHHHHHHHHHHHHhCC
Confidence 46776666555555666666 6787777765432222222222211 5566665532 67778777766433222
Q ss_pred CeeEEE
Q 009517 270 TVRALV 275 (533)
Q Consensus 270 ~~~~ii 275 (533)
++..++
T Consensus 78 ~id~lv 83 (257)
T PRK07024 78 LPDVVI 83 (257)
T ss_pred CCCEEE
Confidence 455444
No 431
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=58.51 E-value=1.5e+02 Score=27.13 Aligned_cols=103 Identities=21% Similarity=0.284 Sum_probs=65.8
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEE---EcCCcC------c--c---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGIL---CPIPQY------P--L---YSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vl---v~~p~~------~--~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
++..+||.....++..+.. .|..|. +..|.. + + ....++..|++...++++... .--.+.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~--~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~--e~~~~~l~ 78 (194)
T cd01994 3 VALISGGKDSCYALYRALE--EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEE--EDEVEDLK 78 (194)
T ss_pred EEEecCCHHHHHHHHHHHH--cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCc--hHHHHHHH
Confidence 4567899888888777664 454322 221221 1 1 234567789888877764321 11136666
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
+.+++.+.. ...+|+ +|.+.+..+...+-++|.+.|+..+.
T Consensus 79 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~~ 119 (194)
T cd01994 79 ELLRKLKEE--GVDAVV-------FGAILSEYQRTRVERVCERLGLEPLA 119 (194)
T ss_pred HHHHHHHHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEEe
Confidence 667665333 355666 79999999999999999999987664
No 432
>PRK05867 short chain dehydrogenase; Provisional
Probab=58.06 E-value=1.5e+02 Score=27.87 Aligned_cols=81 Identities=12% Similarity=0.125 Sum_probs=43.2
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.+. +.|.+|++..-.-....... ...+.++..+..|- -|.+.+++.++...+.
T Consensus 10 k~vlVtGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYV-EAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSMLDQVTAE 83 (253)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 456666655555555556666 67877776543322222222 22355666666653 3677777776654322
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
-.+...++.+
T Consensus 84 ~g~id~lv~~ 93 (253)
T PRK05867 84 LGGIDIAVCN 93 (253)
T ss_pred hCCCCEEEEC
Confidence 2245555533
No 433
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=57.40 E-value=1.4e+02 Score=27.86 Aligned_cols=83 Identities=16% Similarity=0.070 Sum_probs=44.7
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~--g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
...+++|.++...-..+.+.+. +.|.+|++..-.-.......... +.++..+..+- .|.+.+.+.++.....
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFA-AEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALER 78 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3456776655555555666666 56766766543322222222222 34565666553 3778887777654332
Q ss_pred CCCeeEEEEeC
Q 009517 268 GITVRALVVIN 278 (533)
Q Consensus 268 g~~~~~iil~~ 278 (533)
..+..+||.+.
T Consensus 79 ~~~~d~vi~~a 89 (251)
T PRK07231 79 FGSVDILVNNA 89 (251)
T ss_pred hCCCCEEEECC
Confidence 33566666553
No 434
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=57.02 E-value=1.8e+02 Score=27.89 Aligned_cols=99 Identities=9% Similarity=0.024 Sum_probs=61.9
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcC--CcCcchHHHH--HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPI--PQYPLYSASI--ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~--p~~~~~~~~~--~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
+.+++|-|.+..+..++... +.+.+|++.+ |...+...+. ...|.++..++- ..+-..+.
T Consensus 87 ~dvILT~s~S~~v~~~l~~~--~~~~~V~v~ESrP~~eG~~~a~~L~~~GI~vtli~D----------sa~~~~m~---- 150 (253)
T PRK06372 87 DSVIGTISSSQVLKAFISSS--EKIKSVYILESRPMLEGIDMAKLLVKSGIDVVLLTD----------ASMCEAVL---- 150 (253)
T ss_pred CCEEEEeCCcHHHHHHHHhc--CCCCEEEEecCCCchHHHHHHHHHHHCCCCEEEEeh----------hHHHHHHH----
Confidence 46999999888888877553 3445777765 6665543333 335777765541 12222332
Q ss_pred cCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 267 KGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 267 ~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
++..|++- .---..|.++++---..++-.|+++++.+++
T Consensus 151 ---~vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 151 ---NVDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred ---hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 35555553 3334557777777677788889999998876
No 435
>PRK06483 dihydromonapterin reductase; Provisional
Probab=56.85 E-value=1.5e+02 Score=27.41 Aligned_cols=76 Identities=11% Similarity=0.087 Sum_probs=38.7
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.+++|.|+...-..+.+.+. ..|.+|++..-.-......+...|.. .+..|- -|.+.+++.+....+.-.+.
T Consensus 4 ~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~D~-----~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLL-AQGQPVIVSYRTHYPAIDGLRQAGAQ--CIQADF-----STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHHcCCE--EEEcCC-----CCHHHHHHHHHHHHhhCCCc
Confidence 45666655555555555565 57877766543322223333444543 344442 25677777766643322234
Q ss_pred eEEE
Q 009517 272 RALV 275 (533)
Q Consensus 272 ~~ii 275 (533)
..++
T Consensus 76 d~lv 79 (236)
T PRK06483 76 RAII 79 (236)
T ss_pred cEEE
Confidence 4444
No 436
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=56.80 E-value=1.5e+02 Score=28.03 Aligned_cols=81 Identities=14% Similarity=0.059 Sum_probs=44.8
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.++...-..+.+.+. +.|..|++..-. .... ..+...+.++..+..|-. |.+.+++.+.....
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~-~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~ 87 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALA-KAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLT-----KPESAEKVVKEALE 87 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3456776666655566666666 678777665433 2222 223334556666666533 56777776665433
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
...+...++.+
T Consensus 88 ~~g~id~li~~ 98 (258)
T PRK06935 88 EFGKIDILVNN 98 (258)
T ss_pred HcCCCCEEEEC
Confidence 33355665544
No 437
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=56.65 E-value=2e+02 Score=28.43 Aligned_cols=118 Identities=10% Similarity=0.028 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChH--------HHHHHHHHHhccCCC--CeEEEc--CCcCcc-hH--HHHHHhC
Q 009517 172 LRDTIAAGIEARDGFPADPNDIFLTDGAS--------PAVHMMMQLLIRSEN--DGILCP--IPQYPL-YS--ASIALHG 236 (533)
Q Consensus 172 lr~aia~~~~~~~g~~~~~~~i~~t~G~~--------~al~~~~~~l~~~~g--d~Vlv~--~p~~~~-~~--~~~~~~g 236 (533)
.++.|+++-... +....+++|.|-+ .....+++.+. +.| -+|++. .|...+ .. ..+...|
T Consensus 104 ~~~~Ia~~a~~~----I~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~-~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~g 178 (303)
T TIGR00524 104 TNRKIGENGAKL----IKDGDTVLTHCNAGALATSDYGTALGVIRSAW-EDGKRIRVIACETRPRNQGSRLTAWELMQDG 178 (303)
T ss_pred HHHHHHHHHHHH----ccCCCEEEEecCCccccccCcchHHHHHHHHH-HcCCceEEEECCCCCccchHHHHHHHHHHCC
Confidence 345555554333 3445688887755 33333444443 233 456665 377666 33 3344467
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
.++..++- ..+-..+... ++..|++- .---..|-++.+----.++-+|+.+++.+++=
T Consensus 179 I~vtlI~D----------sa~~~~m~~~-----~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 179 IDVTLITD----------SMAAYFMQKG-----EIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred CCEEEECh----------hHHHHHcccc-----CCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 77766542 2233333321 35555553 33344566666666677788889999877753
No 438
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=56.23 E-value=25 Score=34.81 Aligned_cols=70 Identities=17% Similarity=0.342 Sum_probs=48.0
Q ss_pred hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
....+...+.++..+.+.++.+|.+..+...+.-+. |.. .++ .+.|-.+|++++++|++.|+++|+-||
T Consensus 21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~----g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK----GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh----ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 344556678888888888777787765554444322 101 111 234558999999999999999999888
Q ss_pred E
Q 009517 308 A 308 (533)
Q Consensus 308 ~ 308 (533)
-
T Consensus 90 P 90 (303)
T cd02742 90 P 90 (303)
T ss_pred E
Confidence 6
No 439
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=55.84 E-value=19 Score=36.03 Aligned_cols=72 Identities=21% Similarity=0.382 Sum_probs=48.8
Q ss_pred hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
..+.+...+.++..+.+.++.+|.+..+...+.-.. | +- .....+.|-.+|.+++++|++.|+++||-||
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~----g----a~--~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEI----G----GS--TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCccccccc----c----cc--cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 345566678888888888777787765554432211 1 00 1122455678999999999999999999888
Q ss_pred Ec
Q 009517 308 AD 309 (533)
Q Consensus 308 ~D 309 (533)
--
T Consensus 93 PE 94 (329)
T cd06568 93 PE 94 (329)
T ss_pred Ee
Confidence 63
No 440
>PRK06841 short chain dehydrogenase; Provisional
Probab=55.78 E-value=1.6e+02 Score=27.72 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=42.6
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.++...-..+.+.+. +.|.+|++...............+..+..+++|- -|.+.+++.+....+...
T Consensus 15 ~k~vlItGas~~IG~~la~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFA-AKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 3456666555555555555565 5787777655432222112222244455566553 267777777665433223
Q ss_pred CeeEEEEe
Q 009517 270 TVRALVVI 277 (533)
Q Consensus 270 ~~~~iil~ 277 (533)
+..+++.+
T Consensus 89 ~~d~vi~~ 96 (255)
T PRK06841 89 RIDILVNS 96 (255)
T ss_pred CCCEEEEC
Confidence 45556544
No 441
>PRK08339 short chain dehydrogenase; Provisional
Probab=55.56 E-value=1.6e+02 Score=28.12 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=48.2
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-.-......... .+.++..+..|-. |.+.+++.++....
T Consensus 9 k~~lItGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~~~~~~ 82 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLA-RAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT-----KREDLERTVKELKN 82 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-----CHHHHHHHHHHHHh
Confidence 345555555444555555665 6787777754332222222221 2445666665532 56777776665422
Q ss_pred cCCCeeEEEEeCCCCCC-c--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPT-G--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPt-G--~~~s~~~l~~i~~ 297 (533)
.| +...++ ++..-+. + ...+.++|++..+
T Consensus 83 ~g-~iD~lv-~nag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T PRK08339 83 IG-EPDIFF-FSTGGPKPGYFMEMSMEDWEGAVK 114 (263)
T ss_pred hC-CCcEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 22 344444 4442111 1 1355666665443
No 442
>PRK06139 short chain dehydrogenase; Provisional
Probab=55.22 E-value=1.5e+02 Score=29.62 Aligned_cols=100 Identities=13% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.++...-..+.+.+. ..|.+|++..-.-.... ..++..|.++..+++|-. |.+.+++.++.....
T Consensus 8 k~vlITGAs~GIG~aia~~la-~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFA-RRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVT-----DADQVKALATQAASF 81 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHHHh
Confidence 345555544444444555555 67877776543322222 223345777777766533 677777777654333
Q ss_pred CCCeeEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG~--~~s~~~l~~i~~ 297 (533)
..+...+| ++.. ...|. ..+.++++++.+
T Consensus 82 ~g~iD~lV-nnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 82 GGRIDVWV-NNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred cCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 22455554 4442 22222 334455555444
No 443
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=54.55 E-value=76 Score=29.06 Aligned_cols=100 Identities=10% Similarity=0.133 Sum_probs=55.3
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCC--eEEEEecCCCCCCCCCHHH-HHHHHHHHHhcC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGG--TLVPYYLDEATGWGLETSE-VKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~--~~~~v~~~~~~~~~ld~~~-l~~~i~~~~~~g 268 (533)
.+.+.+|+..++-.++...+...|-+|++.+-.-......+...+. .-..+..|-.+ .-|.+. |++.++..
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~--a~~v~~~l~e~~k~~---- 88 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSK--AHDVQNTLEEMEKSL---- 88 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCc--HHHHHHHHHHHHHhc----
Confidence 3445555555665555544437889999988777677777777765 22233332211 113333 44444443
Q ss_pred CCeeEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 269 ITVRALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 269 ~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
.+-.|+++.. -+-.+ .-++.++|.++..+
T Consensus 89 -g~psvlVncAGItrD~~Llrmkq~qwd~vi~v 120 (256)
T KOG1200|consen 89 -GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAV 120 (256)
T ss_pred -CCCcEEEEcCccccccceeeccHHHHHHHHHh
Confidence 2445555544 33333 46788889887664
No 444
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=54.50 E-value=1.9e+02 Score=27.16 Aligned_cols=102 Identities=11% Similarity=0.041 Sum_probs=52.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.+. +.|..|++..-.-...... +...+.++..+++|-. |.+.+++.+.....
T Consensus 9 ~k~~lItGas~giG~~ia~~L~-~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 82 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLA-EYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVT-----HKQEVEAAIEHIEK 82 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCC-----CHHHHHHHHHHHHH
Confidence 3456666666555556666666 6787777654321111222 2223556666666533 56777777665433
Q ss_pred cCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
...+...++.+....+.+ ...+.++|++..+
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 115 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIA 115 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 333456665443221111 1345556655543
No 445
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=54.13 E-value=2e+02 Score=27.29 Aligned_cols=83 Identities=11% Similarity=0.003 Sum_probs=45.8
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.+. ..|-+|++..-.-...... +...|.++..+++|-. |.+.+++.+.....
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 83 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYA-KAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVT-----DEDGVQAMVSQIEK 83 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3456666665555555666666 5676676654332222222 2233667777777643 67788877766433
Q ss_pred cCCCeeEEEEeC
Q 009517 267 KGITVRALVVIN 278 (533)
Q Consensus 267 ~g~~~~~iil~~ 278 (533)
.-.+..+++.+.
T Consensus 84 ~~~~id~li~~a 95 (265)
T PRK07097 84 EVGVIDILVNNA 95 (265)
T ss_pred hCCCCCEEEECC
Confidence 322456665553
No 446
>PRK06114 short chain dehydrogenase; Provisional
Probab=53.78 E-value=1.7e+02 Score=27.50 Aligned_cols=82 Identities=11% Similarity=0.007 Sum_probs=44.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-chH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
...+++|.|+...-..+.+.+. ..|.+|++....-. ... ..+...+.++..++.|- -|.+.+++.+....
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~i~~~~~~~~ 81 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLA-QAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV-----TSKADLRAAVARTE 81 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3456666655555555666666 67877776543211 112 22333466666676653 26777777776643
Q ss_pred hcCCCeeEEEEe
Q 009517 266 AKGITVRALVVI 277 (533)
Q Consensus 266 ~~g~~~~~iil~ 277 (533)
....+...+|.+
T Consensus 82 ~~~g~id~li~~ 93 (254)
T PRK06114 82 AELGALTLAVNA 93 (254)
T ss_pred HHcCCCCEEEEC
Confidence 322345555433
No 447
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=53.73 E-value=1.8e+02 Score=28.42 Aligned_cols=88 Identities=17% Similarity=0.110 Sum_probs=48.7
Q ss_pred EEEcCC---hHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 193 IFLTDG---ASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 193 i~~t~G---~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
|+++.| ..+++..+-.+- +-| |.|++..|.|.... .+++.+..+.-.+..
T Consensus 73 vi~gv~~~~t~~~i~la~~a~--~~Gad~v~v~~P~y~~~~------------------------~~~i~~yf~~v~~~~ 126 (290)
T TIGR00683 73 LIAQVGSVNLKEAVELGKYAT--ELGYDCLSAVTPFYYKFS------------------------FPEIKHYYDTIIAET 126 (290)
T ss_pred EEEecCCCCHHHHHHHHHHHH--HhCCCEEEEeCCcCCCCC------------------------HHHHHHHHHHHHhhC
Confidence 555544 344444444433 345 88999888875432 233333222221111
Q ss_pred CCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
++...++.++|.. ||..++.+.+.+|++ .-++.-|=|.
T Consensus 127 ~~lpv~lYn~P~~-tg~~l~~~~i~~L~~---~pnv~giK~s 164 (290)
T TIGR00683 127 GGLNMIVYSIPFL-TGVNMGIEQFGELYK---NPKVLGVKFT 164 (290)
T ss_pred CCCCEEEEeCccc-cccCcCHHHHHHHhc---CCCEEEEEeC
Confidence 1355677777754 899999777777653 2356666663
No 448
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=53.62 E-value=43 Score=32.76 Aligned_cols=72 Identities=10% Similarity=0.212 Sum_probs=41.4
Q ss_pred CcCcchHHHHHH--hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 223 PQYPLYSASIAL--HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 223 p~~~~~~~~~~~--~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
|+|....++... ...-++.+|.. .-++.++++.+. .++++++....- ++..-++|.++|+
T Consensus 50 ~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~------Gvk~avIis~Gf------~e~~~~~l~~~a~ 111 (286)
T TIGR01019 50 PVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDA------GIELIVCITEGI------PVHDMLKVKRYME 111 (286)
T ss_pred eccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHHHH
Confidence 455555555443 23334444422 124555555554 577776665442 3334588999999
Q ss_pred HcCCEEEEcccc
Q 009517 301 KEGLVLLADEVY 312 (533)
Q Consensus 301 ~~~~~lI~De~y 312 (533)
++|+.++==.+.
T Consensus 112 ~~girilGPNc~ 123 (286)
T TIGR01019 112 ESGTRLIGPNCP 123 (286)
T ss_pred HcCCEEECCCCc
Confidence 999998854444
No 449
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=53.06 E-value=2e+02 Score=27.03 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=50.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..|++|.|+...-..+.+.+. +.|..|++....-...... ++..+.++..+..|- -|.+.+++.+....+.
T Consensus 12 k~vlVtG~s~gIG~~la~~l~-~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 12 KCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFALSK 85 (255)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 456666666555556666666 6787777665433322222 223355666666553 2677777776654332
Q ss_pred CCCeeEEEEeCC-CCCCccCCCHHHHHH
Q 009517 268 GITVRALVVINP-GNPTGQVLAEENQRA 294 (533)
Q Consensus 268 g~~~~~iil~~p-~NPtG~~~s~~~l~~ 294 (533)
-.+...++.+.. ..+.....+.+++++
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~ 113 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRR 113 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHH
Confidence 224555654432 222222344444444
No 450
>PRK08862 short chain dehydrogenase; Provisional
Probab=53.04 E-value=1.4e+02 Score=27.73 Aligned_cols=82 Identities=9% Similarity=0.060 Sum_probs=44.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.++...-..+.+.+. +.|..|++..-.-...... +...|.++..+.++.. |.+.+++.++...+.
T Consensus 6 k~~lVtGas~GIG~aia~~la-~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFA-RLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDF-----SQESIRHLFDAIEQQ 79 (227)
T ss_pred eEEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 456666555555455555565 6788888765433322222 2233666667766532 677777777654322
Q ss_pred -CCCeeEEEEeCC
Q 009517 268 -GITVRALVVINP 279 (533)
Q Consensus 268 -g~~~~~iil~~p 279 (533)
|.+... ++++.
T Consensus 80 ~g~~iD~-li~na 91 (227)
T PRK08862 80 FNRAPDV-LVNNW 91 (227)
T ss_pred hCCCCCE-EEECC
Confidence 213444 44444
No 451
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=53.00 E-value=1.8e+02 Score=27.27 Aligned_cols=96 Identities=19% Similarity=0.154 Sum_probs=48.6
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
+++|.++...-..+.+.+. ..|-+|++..-.-.... ..+...+.++..+..|- -|.+.+.+.+........
T Consensus 3 ~lItG~sg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 3 ALVTGGAQGIGKGIAERLA-KDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDV-----SDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred EEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 5555554444455555565 56766665443211111 22233466666666653 267787777766533333
Q ss_pred CeeEEEEeCCCCCCcc--CCCHHHHHH
Q 009517 270 TVRALVVINPGNPTGQ--VLAEENQRA 294 (533)
Q Consensus 270 ~~~~iil~~p~NPtG~--~~s~~~l~~ 294 (533)
++..+|.+....+.+. ..+.+.+++
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~ 103 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKK 103 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHH
Confidence 5666665544334332 234444433
No 452
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=52.73 E-value=84 Score=30.99 Aligned_cols=87 Identities=20% Similarity=0.247 Sum_probs=48.7
Q ss_pred EEEcCC---hHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 193 IFLTDG---ASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 193 i~~t~G---~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
|+.+.| ..+++..+-.+- +-| |.|++..|.|.-.. .+.+.+..+...+..
T Consensus 76 viaG~g~~~t~eai~lak~a~--~~Gad~il~v~PyY~k~~------------------------~~gl~~hf~~ia~a~ 129 (299)
T COG0329 76 VIAGVGSNSTAEAIELAKHAE--KLGADGILVVPPYYNKPS------------------------QEGLYAHFKAIAEAV 129 (299)
T ss_pred EEEecCCCcHHHHHHHHHHHH--hcCCCEEEEeCCCCcCCC------------------------hHHHHHHHHHHHHhc
Confidence 666554 445666555544 345 88999999886322 222222222211111
Q ss_pred CCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+...|+.+.|. .||+.++.+.+.++++ -.|+.=|=|.
T Consensus 130 -~lPvilYN~P~-~tg~~l~~e~i~~la~---~~nivgiKd~ 166 (299)
T COG0329 130 -DLPVILYNIPS-RTGVDLSPETIARLAE---HPNIVGVKDS 166 (299)
T ss_pred -CCCEEEEeCcc-ccCCCCCHHHHHHHhc---CCCEEEEEeC
Confidence 44467767775 6999999776666554 2255555553
No 453
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=52.57 E-value=1.1e+02 Score=28.88 Aligned_cols=101 Identities=13% Similarity=0.020 Sum_probs=50.4
Q ss_pred CCCEEEcCChH--HHHHHHHHHhccCCCCeEEEcCC-------cCcc-------hHHHHHHhCCeEEEEecCCCCCCCCC
Q 009517 190 PNDIFLTDGAS--PAVHMMMQLLIRSENDGILCPIP-------QYPL-------YSASIALHGGTLVPYYLDEATGWGLE 253 (533)
Q Consensus 190 ~~~i~~t~G~~--~al~~~~~~l~~~~gd~Vlv~~p-------~~~~-------~~~~~~~~g~~~~~v~~~~~~~~~ld 253 (533)
...+++|.|+. ..-..+.+.+. ..|.+|++..- .+.. ....++..|.++..++.|-. |
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~-~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-----~ 79 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELA-EAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT-----Q 79 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHH-HCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC-----C
Confidence 34566665541 33344444444 56777776421 1110 11223445777777777633 6
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEeCCCC--C-CccCCCHHHHHHHHH
Q 009517 254 TSEVKKQLEAAKAKGITVRALVVINPGN--P-TGQVLAEENQRAIVD 297 (533)
Q Consensus 254 ~~~l~~~i~~~~~~g~~~~~iil~~p~N--P-tG~~~s~~~l~~i~~ 297 (533)
.+.+++.+....+.-.+...+| +++.. + .-...+.+++++..+
T Consensus 80 ~~~i~~~~~~~~~~~g~id~li-~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 80 NDAPKELLNKVTEQLGYPHILV-NNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 7788877776533222455554 44421 1 123455555655444
No 454
>PRK07791 short chain dehydrogenase; Provisional
Probab=52.47 E-value=2.3e+02 Score=27.47 Aligned_cols=79 Identities=15% Similarity=0.044 Sum_probs=41.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC---------cchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY---------PLYSA---SIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~---------~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
..+++|.|+...-..+.+.+. ..|-.|++..-.. ..... .+...|.++..+.+|- -|.+.++
T Consensus 7 k~~lITGas~GIG~aia~~la-~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~ 80 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFA-AEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDI-----ADWDGAA 80 (286)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCC-----CCHHHHH
Confidence 345666555555555555565 5787777654222 11122 2223366666666653 3677777
Q ss_pred HHHHHHHhcCCCeeEEE
Q 009517 259 KQLEAAKAKGITVRALV 275 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~ii 275 (533)
+.++...+.-.+...++
T Consensus 81 ~~~~~~~~~~g~id~lv 97 (286)
T PRK07791 81 NLVDAAVETFGGLDVLV 97 (286)
T ss_pred HHHHHHHHhcCCCCEEE
Confidence 77766433222455554
No 455
>PRK08263 short chain dehydrogenase; Provisional
Probab=52.25 E-value=1.6e+02 Score=28.15 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=41.4
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.|++|.++...-..+.+.+. ..|..|++..-.-..........+..+..+..|- -|.+.+++.++...+.-.+.
T Consensus 5 ~vlItGasg~iG~~~a~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAAL-ERGDRVVATARDTATLADLAEKYGDRLLPLALDV-----TDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHhccCCeeEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 46666555544555555565 5677777654332222222333344555555543 26777777766543322245
Q ss_pred eEEEEe
Q 009517 272 RALVVI 277 (533)
Q Consensus 272 ~~iil~ 277 (533)
.+|+.+
T Consensus 79 d~vi~~ 84 (275)
T PRK08263 79 DIVVNN 84 (275)
T ss_pred CEEEEC
Confidence 555544
No 456
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=52.15 E-value=1.9e+02 Score=27.04 Aligned_cols=83 Identities=12% Similarity=0.061 Sum_probs=45.6
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
....+++|.++...-..+.+.+. +.|-.|++....-. .........+.++..++.|-. |.+.+++.++.....
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~-~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLA-EAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLS-----DIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 34567777666555556666666 67877766553211 122223344556666766533 677777776654322
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
..++..++.+
T Consensus 78 ~~~~d~li~~ 87 (248)
T TIGR01832 78 FGHIDILVNN 87 (248)
T ss_pred cCCCCEEEEC
Confidence 2245555533
No 457
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=51.86 E-value=2.1e+02 Score=26.91 Aligned_cols=79 Identities=15% Similarity=0.090 Sum_probs=39.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.+. +.|..|++..-.-..-...+...+ +..+++|- -|.+.+++.++...+...+
T Consensus 8 k~~lItGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~l~~~~--~~~~~~Dl-----~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFL-REGAKVAVLYNSAENEAKELREKG--VFTIKCDV-----GNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHhCC--CeEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 456666655555555566666 577677654211111112222223 34444442 2677777777654332224
Q ss_pred eeEEEEe
Q 009517 271 VRALVVI 277 (533)
Q Consensus 271 ~~~iil~ 277 (533)
...++.+
T Consensus 80 id~li~~ 86 (255)
T PRK06463 80 VDVLVNN 86 (255)
T ss_pred CCEEEEC
Confidence 5555544
No 458
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=51.66 E-value=50 Score=28.24 Aligned_cols=59 Identities=29% Similarity=0.357 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH-HHHHHHHHHHHHc--CC-EEEEcccccc
Q 009517 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE-ENQRAIVDFCKKE--GL-VLLADEVYQE 314 (533)
Q Consensus 251 ~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~-~~l~~i~~l~~~~--~~-~lI~De~y~~ 314 (533)
..+.+.|.+.++++ ++..|++-.|-|..|..-+. ...++.++.+++. ++ +.++||-|+-
T Consensus 37 ~~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEY-----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHh-----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 66899999999996 78899999998877764433 3355555555543 66 5678998864
No 459
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=51.37 E-value=59 Score=28.85 Aligned_cols=90 Identities=14% Similarity=0.204 Sum_probs=49.2
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~ 272 (533)
|+++.++-..-..+++.++ ..|-+|....-.-..... ..+.+++ ..+ -.|++.+.+++.. ..
T Consensus 1 I~V~GatG~vG~~l~~~L~-~~~~~V~~~~R~~~~~~~---~~~~~~~--~~d-----~~d~~~~~~al~~-------~d 62 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLL-RRGHEVTALVRSPSKAED---SPGVEII--QGD-----LFDPDSVKAALKG-------AD 62 (183)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTSEEEEEESSGGGHHH---CTTEEEE--ESC-----TTCHHHHHHHHTT-------SS
T ss_pred eEEECCCChHHHHHHHHHH-HCCCEEEEEecCchhccc---ccccccc--eee-----ehhhhhhhhhhhh-------cc
Confidence 3444443334445555555 456566655544333332 3344444 433 2378899998874 45
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 009517 273 ALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 273 ~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~ 304 (533)
+|+.+.+.++. ..+..+.+.+.|++.++
T Consensus 63 ~vi~~~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 63 AVIHAAGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp EEEECCHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhhhhhhhcc----ccccccccccccccccc
Confidence 66655433333 25667888888887553
No 460
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=51.20 E-value=2.2e+02 Score=27.24 Aligned_cols=82 Identities=12% Similarity=0.006 Sum_probs=43.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.+. ..|..|++..-.-...... +...|.++..+..|-. |.+.+.+.+....+
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 83 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELA-RAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVL-----DKESLEQARQQILE 83 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 3456666555554455666666 6787777655432222222 2223566667766532 56667666655432
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
.-.+...+|.+
T Consensus 84 ~~g~id~li~~ 94 (278)
T PRK08277 84 DFGPCDILING 94 (278)
T ss_pred HcCCCCEEEEC
Confidence 22245555543
No 461
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=51.09 E-value=26 Score=35.44 Aligned_cols=67 Identities=12% Similarity=0.304 Sum_probs=47.5
Q ss_pred hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
....+.....++..+.+.++.+|.+..+...+.-.. . ....|-.+|++++++|++.|+++||-||
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~------g---------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 23 TIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK------G---------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc------c---------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 345556677888888887777787766555443221 1 0124667999999999999999999888
Q ss_pred Ec
Q 009517 308 AD 309 (533)
Q Consensus 308 ~D 309 (533)
-.
T Consensus 88 PE 89 (348)
T cd06562 88 PE 89 (348)
T ss_pred Ee
Confidence 63
No 462
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=50.63 E-value=45 Score=31.78 Aligned_cols=53 Identities=26% Similarity=0.377 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccc
Q 009517 252 LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312 (533)
Q Consensus 252 ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y 312 (533)
++.+.+.+.++.... +.+.++|. +|.+.+.++++.|.++.+++++++|+|=+.
T Consensus 43 ~~~~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm 95 (246)
T PF08543_consen 43 VDSEMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVM 95 (246)
T ss_dssp --HHHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---
T ss_pred CCHHHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEeccc
Confidence 467778877777654 34778888 899999999999999999889999998544
No 463
>PRK05854 short chain dehydrogenase; Provisional
Probab=50.56 E-value=1.4e+02 Score=29.39 Aligned_cols=82 Identities=17% Similarity=0.156 Sum_probs=41.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH----Hh-CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LH-GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~----~~-g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+...-..+.+.|. ..|-+|++..-.-........ .. +.++..+.+|-. |++.+++.++...
T Consensus 15 k~~lITGas~GIG~~~a~~La-~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~-----d~~sv~~~~~~~~ 88 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLA-AAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLS-----SLASVAALGEQLR 88 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCC-----CHHHHHHHHHHHH
Confidence 345555544444444555555 578777765433222222221 11 345666666532 6788877776643
Q ss_pred hcCCCeeEEEEeCC
Q 009517 266 AKGITVRALVVINP 279 (533)
Q Consensus 266 ~~g~~~~~iil~~p 279 (533)
....+...+| +|.
T Consensus 89 ~~~~~iD~li-~nA 101 (313)
T PRK05854 89 AEGRPIHLLI-NNA 101 (313)
T ss_pred HhCCCccEEE-ECC
Confidence 3333455544 443
No 464
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=50.20 E-value=1.4e+02 Score=28.21 Aligned_cols=81 Identities=10% Similarity=0.061 Sum_probs=40.9
Q ss_pred CCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH-HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+ ...-..+.+.|. +.|.+|++..-. ......+. ..+.++..+.+|- -|.+.+++.++...+.
T Consensus 8 k~~lItGas~~~gIG~a~a~~la-~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIK-DQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFATIKER 80 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHH-HCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHHHHHH
Confidence 445665555 344555555565 678788775432 11112222 2233455566553 2677777776654332
Q ss_pred CCCeeEEEEeCC
Q 009517 268 GITVRALVVINP 279 (533)
Q Consensus 268 g~~~~~iil~~p 279 (533)
..+..+++ +|.
T Consensus 81 ~g~iD~lv-~nA 91 (252)
T PRK06079 81 VGKIDGIV-HAI 91 (252)
T ss_pred hCCCCEEE-Ecc
Confidence 22455544 444
No 465
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=50.10 E-value=2.2e+02 Score=26.61 Aligned_cols=82 Identities=16% Similarity=0.075 Sum_probs=46.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-.-..... .+...+.++..+..|- -|.+.+.++++.....
T Consensus 5 ~~vlItG~sg~iG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALA-KEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDV-----TDEEAINAGIDYAVET 78 (258)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 457777766555566666666 568777665433222222 2222356666666653 2677777777654333
Q ss_pred CCCeeEEEEeC
Q 009517 268 GITVRALVVIN 278 (533)
Q Consensus 268 g~~~~~iil~~ 278 (533)
..++.+|+.+.
T Consensus 79 ~~~~d~vi~~a 89 (258)
T PRK12429 79 FGGVDILVNNA 89 (258)
T ss_pred cCCCCEEEECC
Confidence 33566666553
No 466
>PRK06128 oxidoreductase; Provisional
Probab=49.27 E-value=1.6e+02 Score=28.69 Aligned_cols=100 Identities=15% Similarity=0.022 Sum_probs=52.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC-----cchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-----PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~-----~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-.- ......++..|.++..+..|-. |.+.+++++....
T Consensus 56 k~vlITGas~gIG~~~a~~l~-~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 129 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFA-REGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLK-----DEAFCRQLVERAV 129 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHH-HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHHHHH
Confidence 457777666555556666666 5787776642111 0112233345667777776633 6777777776543
Q ss_pred hcCCCeeEEEEeCCCC--CC--ccCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPGN--PT--GQVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~N--Pt--G~~~s~~~l~~i~~ 297 (533)
+.-.+...+| ++... +. -..++.+++++..+
T Consensus 130 ~~~g~iD~lV-~nAg~~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PRK06128 130 KELGGLDILV-NIAGKQTAVKDIADITTEQFDATFK 164 (300)
T ss_pred HHhCCCCEEE-ECCcccCCCCChhhCCHHHHHHHHH
Confidence 2222455554 43321 11 12345566665544
No 467
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=49.21 E-value=2.9e+02 Score=27.78 Aligned_cols=107 Identities=13% Similarity=0.020 Sum_probs=61.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeE--EEcCCcCc------chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGI--LCPIPQYP------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~V--lv~~p~~~------~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i 261 (533)
.+-|+..+||.....++..+.. .-|..+ +..++.|. +....++.+|.....+.. |.+.+.+..
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~-~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKK-KLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHH-HhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHH
Confidence 5567778999888776633322 224333 44556664 234455667887776654 456665555
Q ss_pred HHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 009517 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~ 317 (533)
... .+ +..+|...+- ......+.++|+++|+.+|+..-..+-.|
T Consensus 131 ~~~------~~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 131 RAY------FK-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEY 174 (343)
T ss_pred HHH------Hh-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhc
Confidence 442 11 2233432221 23367888999999998888754443333
No 468
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=49.13 E-value=1.9e+02 Score=25.70 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=54.9
Q ss_pred HHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEE---ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC
Q 009517 206 MMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPY---YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (533)
Q Consensus 206 ~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v---~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP 282 (533)
+++.+. ..+.-|+.-.|-+..+...+...|+....+ ..... .-.+..+|++++. | ...+|+.--|+.
T Consensus 52 ~L~~Ls-~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~---~d~lwa~EQaLrS----G-~c~aVL~WLp~~- 121 (168)
T TIGR00623 52 LLQQLG-QQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSP---CNTVESMIRALRT----G-NYSVVIGWLTDE- 121 (168)
T ss_pred HHHHhc-ccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCc---hhHHHHHHHHHHh----C-CCcEEEecCCcc-
Confidence 334444 356667777888888899999999864433 22211 1246788888887 2 344444334533
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 283 TGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 283 tG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
++.+++++|--.++.-+.+.|
T Consensus 122 ----l~~~~lRRLqlAA~~G~al~f 142 (168)
T TIGR00623 122 ----LTEEEHAKLVRAAEEGNAMGF 142 (168)
T ss_pred ----CCHHHHHHHHHHHHhCCCeEE
Confidence 677889998777776654433
No 469
>PRK12743 oxidoreductase; Provisional
Probab=49.03 E-value=1.7e+02 Score=27.60 Aligned_cols=80 Identities=16% Similarity=0.008 Sum_probs=44.3
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.+. +.|-+|++.. ..-... ...+...|.++..+..|-. |.+.+++.+....+.
T Consensus 4 ~vlItGas~giG~~~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLA-QQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS-----DLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 46666666666666666676 6787776642 221111 1223334666766666533 677777766654332
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
..+...|+.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 2355666544
No 470
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=48.45 E-value=1.9e+02 Score=27.04 Aligned_cols=81 Identities=10% Similarity=0.034 Sum_probs=44.2
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEc-C-CcCc--chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-I-PQYP--LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~-p~~~--~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.+. +.|.+|++. . ..-. .....++..+.++..+..|.. |.+.+++.++.....
T Consensus 6 ~vlItGa~g~iG~~~a~~l~-~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 6 VALVTGSSRGIGKAIALRLA-EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-----DVEKIKEMFAQIDEE 79 (250)
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 46666666555556666666 678676542 2 1111 111223345677777776643 677887777664332
Q ss_pred CCCeeEEEEeC
Q 009517 268 GITVRALVVIN 278 (533)
Q Consensus 268 g~~~~~iil~~ 278 (533)
..++.+||.+.
T Consensus 80 ~~~id~vi~~a 90 (250)
T PRK08063 80 FGRLDVFVNNA 90 (250)
T ss_pred cCCCCEEEECC
Confidence 22455665443
No 471
>PRK07062 short chain dehydrogenase; Provisional
Probab=48.34 E-value=2.4e+02 Score=26.61 Aligned_cols=79 Identities=20% Similarity=0.138 Sum_probs=41.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---H-h-CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-H-GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~-~-g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-.-........ . . +.++..++.|- -|.+.+++.+....
T Consensus 9 k~~lItGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 82 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLL-EAGASVAICGRDEERLASAEARLREKFPGARLLAARCDV-----LDEADVAAFAAAVE 82 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecC-----CCHHHHHHHHHHHH
Confidence 445666555555555555565 578777765543222222211 1 1 34666666653 36777777766543
Q ss_pred hcCCCeeEEE
Q 009517 266 AKGITVRALV 275 (533)
Q Consensus 266 ~~g~~~~~ii 275 (533)
..-.+...++
T Consensus 83 ~~~g~id~li 92 (265)
T PRK07062 83 ARFGGVDMLV 92 (265)
T ss_pred HhcCCCCEEE
Confidence 2222445444
No 472
>PRK07856 short chain dehydrogenase; Provisional
Probab=48.14 E-value=2.4e+02 Score=26.47 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=40.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.+. ..|..|++..-.-.. ...+.++..+..|- -|.+.+++.+....+...+
T Consensus 7 k~~lItGas~gIG~~la~~l~-~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFL-AAGATVVVCGRRAPE-----TVDGRPAEFHAADV-----RDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCChhh-----hhcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 445665555444455566665 567777665432211 22345555565553 2577777777654332334
Q ss_pred eeEEEEe
Q 009517 271 VRALVVI 277 (533)
Q Consensus 271 ~~~iil~ 277 (533)
...+|.+
T Consensus 76 id~vi~~ 82 (252)
T PRK07856 76 LDVLVNN 82 (252)
T ss_pred CCEEEEC
Confidence 5666544
No 473
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=47.90 E-value=2.4e+02 Score=26.47 Aligned_cols=82 Identities=17% Similarity=0.022 Sum_probs=43.3
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
..+++|.|+...-..+.+.+. +.|..|+..+..-. .....+...+.++..+..+-. |.+.+++.+++......
T Consensus 11 k~~lItG~~~gIG~a~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLA-EAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLR-----KIDGIPALLERAVAEFG 84 (253)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHHHhC
Confidence 456666655555555566666 67877765432211 111222334556666666532 67777777765433333
Q ss_pred CeeEEEEeCC
Q 009517 270 TVRALVVINP 279 (533)
Q Consensus 270 ~~~~iil~~p 279 (533)
+..+++ +++
T Consensus 85 ~~D~li-~~A 93 (253)
T PRK08993 85 HIDILV-NNA 93 (253)
T ss_pred CCCEEE-ECC
Confidence 455444 444
No 474
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=47.58 E-value=65 Score=26.29 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=20.9
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 273 ALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 273 ~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
-|++.-|-- .+.++.++|.++++++|..+.+
T Consensus 88 ~v~~EKP~~-----~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 88 HVLVEKPLA-----LTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp EEEEESSSS-----SSHHHHHHHHHHHHHHTSCEEE
T ss_pred EEEEEcCCc-----CCHHHHHHHHHHHHHhCCEEEE
Confidence 455555532 3677788888888888776654
No 475
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=47.31 E-value=28 Score=34.53 Aligned_cols=63 Identities=16% Similarity=0.332 Sum_probs=40.8
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
.+.+...+.++....+.++.+|.+..+...+.-.. . ..|-.+|.+++++|++.|+++|+-||-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~----------------g-~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQK----------------A-SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCcccccc----------------C-CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 34445566777777766666666544332221110 0 135579999999999999999998876
No 476
>PRK07109 short chain dehydrogenase; Provisional
Probab=47.29 E-value=2.4e+02 Score=28.16 Aligned_cols=79 Identities=13% Similarity=0.109 Sum_probs=42.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..|++|.++...-..+.+.+. ..|.+|++..-.-.... ..+...|.++..+..|-. |.+.++++++...+.
T Consensus 9 k~vlITGas~gIG~~la~~la-~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~-----d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFA-RRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVA-----DAEAVQAAADRAEEE 82 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 445666555444444556665 57877776553322222 223345777777776643 677787777654322
Q ss_pred CCCeeEEE
Q 009517 268 GITVRALV 275 (533)
Q Consensus 268 g~~~~~ii 275 (533)
-.+...+|
T Consensus 83 ~g~iD~lI 90 (334)
T PRK07109 83 LGPIDTWV 90 (334)
T ss_pred CCCCCEEE
Confidence 22455444
No 477
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=47.19 E-value=2.1e+02 Score=27.01 Aligned_cols=83 Identities=14% Similarity=0.099 Sum_probs=44.5
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-c---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-L---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
....+++|.|+...-..+.+.+. ..|-.|++....=. . ....+...+.++..+++|-. |.+.+.+.++..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~-~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~ 79 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFG-KEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVT-----VESDVVNLIQTA 79 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCC-----CHHHHHHHHHHH
Confidence 34466777666665666666666 56766665322111 1 11222334666766766643 677777766654
Q ss_pred HhcCCCeeEEEEe
Q 009517 265 KAKGITVRALVVI 277 (533)
Q Consensus 265 ~~~g~~~~~iil~ 277 (533)
.+...++.+++.+
T Consensus 80 ~~~~g~id~lv~~ 92 (261)
T PRK08936 80 VKEFGTLDVMINN 92 (261)
T ss_pred HHHcCCCCEEEEC
Confidence 3323345555533
No 478
>PRK07825 short chain dehydrogenase; Provisional
Probab=47.00 E-value=2.3e+02 Score=26.91 Aligned_cols=79 Identities=19% Similarity=0.081 Sum_probs=38.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.++...-..+.+.+. +.|-.|++..-.-..........+ ++..+.+|-. |.+.+++.++...+...+
T Consensus 6 ~~ilVtGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 6 KVVAITGGARGIGLATARALA-ALGARVAIGDLDEALAKETAAELG-LVVGGPLDVT-----DPASFAAFLDAVEADLGP 78 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 346666554444445555565 567777665432222222223333 2344444422 677777776664332224
Q ss_pred eeEEEE
Q 009517 271 VRALVV 276 (533)
Q Consensus 271 ~~~iil 276 (533)
...+|.
T Consensus 79 id~li~ 84 (273)
T PRK07825 79 IDVLVN 84 (273)
T ss_pred CCEEEE
Confidence 444443
No 479
>PRK06482 short chain dehydrogenase; Provisional
Probab=46.99 E-value=2e+02 Score=27.40 Aligned_cols=80 Identities=19% Similarity=0.154 Sum_probs=41.8
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.+++|.|+...-..+.+.+. +.|..|++..-............+.++..+..|-. |.+.+++.+....+...+.
T Consensus 4 ~vlVtGasg~IG~~la~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLL-ARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVT-----DSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred EEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 36666655555555566666 67877776554332223222333445555555432 6777777766532222245
Q ss_pred eEEEEe
Q 009517 272 RALVVI 277 (533)
Q Consensus 272 ~~iil~ 277 (533)
..||.+
T Consensus 78 d~vi~~ 83 (276)
T PRK06482 78 DVVVSN 83 (276)
T ss_pred CEEEEC
Confidence 555544
No 480
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=46.89 E-value=2.3e+02 Score=26.46 Aligned_cols=79 Identities=13% Similarity=0.105 Sum_probs=39.8
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~ 272 (533)
|++|.++...-..+.+.+. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.+....+...+..
T Consensus 3 vlItGasg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 3 VLVTGATAGFGECITRRFI-QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVR-----NRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEECCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhccceEEEEecCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 5555444444444555555 56877776543222222233334556666665532 56777776665432222455
Q ss_pred EEEEe
Q 009517 273 ALVVI 277 (533)
Q Consensus 273 ~iil~ 277 (533)
.++.+
T Consensus 77 ~vi~~ 81 (248)
T PRK10538 77 VLVNN 81 (248)
T ss_pred EEEEC
Confidence 55533
No 481
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=46.76 E-value=83 Score=27.16 Aligned_cols=56 Identities=27% Similarity=0.237 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH-HHHHHHHHHHc-CC-EEEEcccc
Q 009517 252 LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN-QRAIVDFCKKE-GL-VLLADEVY 312 (533)
Q Consensus 252 ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~-l~~i~~l~~~~-~~-~lI~De~y 312 (533)
.|++.|.+.++++ .+..|++-.|.|..|...+..+ .++.++..+++ ++ +++.||-.
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERl 98 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERL 98 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 5899999999997 7888999999999998777543 67777766654 44 44556544
No 482
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=46.32 E-value=2.6e+02 Score=27.49 Aligned_cols=81 Identities=14% Similarity=0.090 Sum_probs=40.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-.-.......... +.++..+..|- -|.+.+++.++.....
T Consensus 7 k~vlVTGas~gIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 7 GTVIITGASSGVGLYAAKALA-KRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL-----GDLDSVRRFVDDFRAL 80 (322)
T ss_pred CEEEEEcCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecC-----CCHHHHHHHHHHHHHh
Confidence 346666555444444555565 56777776543222222222222 33455555542 2677777777654333
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
+.+...||.+
T Consensus 81 ~~~iD~li~n 90 (322)
T PRK07453 81 GKPLDALVCN 90 (322)
T ss_pred CCCccEEEEC
Confidence 3345555433
No 483
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=46.29 E-value=2.4e+02 Score=26.05 Aligned_cols=101 Identities=14% Similarity=0.066 Sum_probs=50.9
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|..|++..-.-.... ..+...+.++..+..|-. |.+.+++.++.....
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALA-KEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVS-----DYEEVTAAIEQLKNE 81 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 345665554444444555555 56767666542211111 122334556666666532 677887777754333
Q ss_pred CCCeeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 009517 268 GITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~--~~s~~~l~~i~~ 297 (533)
-.++.+|+.+...++.+. ..+.+.+++..+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 113 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQ 113 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHH
Confidence 235666665543333222 234455554433
No 484
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=46.18 E-value=2.6e+02 Score=26.25 Aligned_cols=81 Identities=16% Similarity=0.081 Sum_probs=44.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.++...-..+.+.+. +.|..|++....-...... +...|.++..+..|-. |.+.+++.+......
T Consensus 8 ~~vlItGasg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELA-RAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVT-----NEDAVNAGIDKVAER 81 (262)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 446666555555555666666 6787777665443333322 2334566666665532 677777776654222
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
..++.+||-+
T Consensus 82 ~~~~d~vi~~ 91 (262)
T PRK13394 82 FGSVDILVSN 91 (262)
T ss_pred cCCCCEEEEC
Confidence 2245555443
No 485
>PRK04296 thymidine kinase; Provisional
Probab=46.01 E-value=1.1e+02 Score=27.65 Aligned_cols=98 Identities=8% Similarity=0.092 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhccCCCCeEEEcCCcCcc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 009517 200 SPAVHMMMQLLIRSENDGILCPIPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276 (533)
Q Consensus 200 ~~al~~~~~~l~~~~gd~Vlv~~p~~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil 276 (533)
+.++..+.+.. ..|.+|++..|.+.. ....+...|..+..+.. ...+++.+.+.. . ..+..+|++
T Consensus 17 T~~l~~~~~~~--~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~--~-~~~~dvviI 84 (190)
T PRK04296 17 TELLQRAYNYE--ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEE--E-GEKIDCVLI 84 (190)
T ss_pred HHHHHHHHHHH--HcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHh--h-CCCCCEEEE
Confidence 45666655554 357788877664322 23344444543332221 123444444433 1 125667777
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 277 ~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
-..+. ++.+++.++.+.++..|+.+|+=.-...
T Consensus 85 DEaq~-----l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 85 DEAQF-----LDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred Ecccc-----CCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 77743 6777788898988888988877554444
No 486
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=45.57 E-value=3.7e+02 Score=27.90 Aligned_cols=55 Identities=13% Similarity=0.175 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCC-CCCCccCCCHHHHHHHHHHHHH---cCCEEEEcccc
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKK---EGLVLLADEVY 312 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p-~NPtG~~~s~~~l~~i~~l~~~---~~~~lI~De~y 312 (533)
+++.+.+++....... +...|++-.+ .|+ -+.+.+.++.++.+. +.++++.|...
T Consensus 304 d~~~L~~aL~~lk~~~-~~DvVLIDTaGRs~----kd~~lm~EL~~~lk~~~PdevlLVLsATt 362 (436)
T PRK11889 304 DEAAMTRALTYFKEEA-RVDYILIDTAGKNY----RASETVEEMIETMGQVEPDYICLTLSASM 362 (436)
T ss_pred CHHHHHHHHHHHHhcc-CCCEEEEeCccccC----cCHHHHHHHHHHHhhcCCCeEEEEECCcc
Confidence 6778888886642110 2467777766 333 334456777666654 34666676544
No 487
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=45.54 E-value=1.7e+02 Score=30.42 Aligned_cols=97 Identities=11% Similarity=0.164 Sum_probs=57.8
Q ss_pred CCEEEcCChHHHHHHHHHHhcc--------CCCCeEEEcCCcCcchH-----H----HHHHhCCeEEE-EecCCCCCCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIR--------SENDGILCPIPQYPLYS-----A----SIALHGGTLVP-YYLDEATGWGL 252 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~--------~~gd~Vlv~~p~~~~~~-----~----~~~~~g~~~~~-v~~~~~~~~~l 252 (533)
+-|++++|++......+..+.. .+||.|++..+.++++. . .+...|+++.. +.++. .-
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~Sg----Ha 362 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSG----HA 362 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecC----CC
Confidence 3467777765444443433321 26789999998888766 1 12235776643 33322 34
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~ 304 (533)
+-++|...++.. +++.++..|-- ...+.+.++++++.|+
T Consensus 363 ~~~dl~~~i~~~-----~Pk~~ipvHge--------~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 363 SQEDHKLLLRLL-----KPKYIIPVHGE--------YRMLINHTKLAEEEGY 401 (422)
T ss_pred CHHHHHHHHHHh-----CCCEEEecCCc--------HHHHHHHHHHHHHcCC
Confidence 678888877765 67777644432 1347777788877664
No 488
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=45.29 E-value=3.1e+02 Score=26.87 Aligned_cols=98 Identities=14% Similarity=0.026 Sum_probs=49.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-chH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++....-. ... ..+...|.++..+..|-. |.+.+++.++...+
T Consensus 13 k~~lVTGas~gIG~~ia~~L~-~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~-----d~~~~~~~~~~~~~ 86 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLA-RLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDIS-----QRATADELVATAVG 86 (306)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHHHHHH
Confidence 445555555444444555555 57877777543221 111 223334677777776633 67777777765433
Q ss_pred cCCCeeEEEEeCCCCCC-c--cCCCHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPT-G--QVLAEENQRAIV 296 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPt-G--~~~s~~~l~~i~ 296 (533)
..+...+| ++..... + ...+.+++++..
T Consensus 87 -~g~iD~li-~nAG~~~~~~~~~~~~~~~~~~~ 117 (306)
T PRK07792 87 -LGGLDIVV-NNAGITRDRMLFNMSDEEWDAVI 117 (306)
T ss_pred -hCCCCEEE-ECCCCCCCCCcccCCHHHHHHHH
Confidence 22455554 4432211 1 134555565543
No 489
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=45.02 E-value=1.9e+02 Score=26.88 Aligned_cols=79 Identities=15% Similarity=0.071 Sum_probs=40.1
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
+++|.|+...-..+.+.+. +.|..|++. ...-..- ...+...+.++..+..|- -|.+.+++.+.+..+..
T Consensus 6 ~lVtG~s~giG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 6 AYVTGGMGGIGTSICQRLH-KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNV-----GDWDSTKAAFDKVKAEV 79 (246)
T ss_pred EEEECCCChHHHHHHHHHH-HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHh
Confidence 4555554444455555665 677666653 2111111 112223466666666653 36777777776543322
Q ss_pred CCeeEEEEe
Q 009517 269 ITVRALVVI 277 (533)
Q Consensus 269 ~~~~~iil~ 277 (533)
.+...|+.+
T Consensus 80 ~~id~li~~ 88 (246)
T PRK12938 80 GEIDVLVNN 88 (246)
T ss_pred CCCCEEEEC
Confidence 355655533
No 490
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=45.01 E-value=75 Score=30.42 Aligned_cols=95 Identities=12% Similarity=0.276 Sum_probs=56.2
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCC-CHHHHHHHHHHHHhcCCC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL-ETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~l-d~~~l~~~i~~~~~~g~~ 270 (533)
+|++-.|++++-.++-... +.|. |+++.-+- |.............+... ++ |.++|++.++++ +
T Consensus 2 ~ILvlgGTtE~r~la~~L~--~~g~-v~~sv~t~--~g~~~~~~~~~~~~v~~G-----~lg~~~~l~~~l~~~-----~ 66 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERLA--EAGY-VIVSVATS--YGGELLKPELPGLEVRVG-----RLGDEEGLAEFLREN-----G 66 (249)
T ss_pred EEEEEechHHHHHHHHHHH--hcCC-EEEEEEhh--hhHhhhccccCCceEEEC-----CCCCHHHHHHHHHhC-----C
Confidence 5889999999987776655 4566 55544332 222222111111122221 56 899999999885 6
Q ss_pred eeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 271 ~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
+++|| ....|--..+ =+.+.+.|++.|+..+
T Consensus 67 i~~vI--DATHPfA~~i----s~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 67 IDAVI--DATHPFAAEI----SQNAIEACRELGIPYL 97 (249)
T ss_pred CcEEE--ECCCchHHHH----HHHHHHHHhhcCcceE
Confidence 66654 3333433333 4777888999887655
No 491
>PRK06484 short chain dehydrogenase; Validated
Probab=45.01 E-value=1.9e+02 Score=30.79 Aligned_cols=100 Identities=11% Similarity=0.068 Sum_probs=0.0
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~ 272 (533)
+++|.++...-..+.+.+. ..|..|++..-.-..........|.++..+..|-. |.+.++++++...+...+..
T Consensus 8 ~lITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 8 VLVTGAAGGIGRAACQRFA-RAGDQVVVADRNVERARERADSLGPDHHALAMDVS-----DEAQIREGFEQLHREFGRID 81 (520)
T ss_pred EEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccC-----CHHHHHHHHHHHHHHhCCCC
Q ss_pred EEEEe----CCCCCCccCCCHHHHHHHHHH
Q 009517 273 ALVVI----NPGNPTGQVLAEENQRAIVDF 298 (533)
Q Consensus 273 ~iil~----~p~NPtG~~~s~~~l~~i~~l 298 (533)
.+|.+ .+....-...+.+++++..++
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~ 111 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAI 111 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHH
No 492
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=44.60 E-value=2.6e+02 Score=25.80 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=58.3
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
+....|++..||..|...+-..+ +.|-.|.+-+|....-...+...| ++..+.-. | ..+. +
T Consensus 7 l~gk~vlVvGgG~va~rk~~~Ll--~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~----~--~~~d----l------ 67 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKARLLL--KAGAQLRVIAEELESELTLLAEQG-GITWLARC----F--DADI----L------ 67 (205)
T ss_pred cCCCeEEEECcCHHHHHHHHHHH--HCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeCC----C--CHHH----h------
Confidence 44567888888888877765544 567778888887764433333333 44333321 1 2222 2
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEcccc-cccc
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL-LADEVY-QENV 316 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~l-I~De~y-~~~~ 316 (533)
....+++..++++ +--+.|.+.|++.++++ ++|+.- +.|.
T Consensus 68 --~~~~lVi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e~~~f~ 109 (205)
T TIGR01470 68 --EGAFLVIAATDDE-------ELNRRVAHAARARGVPVNVVDDPELCSFI 109 (205)
T ss_pred --CCcEEEEECCCCH-------HHHHHHHHHHHHcCCEEEECCCcccCeEE
Confidence 1224455556553 22468999999999887 355543 4443
No 493
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=44.31 E-value=3.1e+02 Score=26.67 Aligned_cols=117 Identities=13% Similarity=0.113 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC--CeEEEcC--CcCcchHHHH--HHhCCeEEEEe
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPI--PQYPLYSASI--ALHGGTLVPYY 243 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~--p~~~~~~~~~--~~~g~~~~~v~ 243 (533)
.+.++.|+++-... +....+++|.+-+.....+++.+. +.| -+|++.+ |.+.+..-+. ...|..+..++
T Consensus 93 ~~~~~~I~~~a~~~----I~~g~~ILTh~~S~tv~~~l~~A~-~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~ 167 (275)
T PRK08335 93 EEAKREIGNIGSEL----IDDGDVIITHSFSSAVLEILKTAK-RKGKRFKVILTESAPDYEGLALANELEFLGIEFEVIT 167 (275)
T ss_pred HHHHHHHHHHHHHH----cCCCCEEEEECCcHHHHHHHHHHH-HcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEEe
Confidence 34455555554433 345567888775555555555544 344 3566655 7666544433 33577766654
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 244 ~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
-. .+-..++ ++..|++- .---..|.+..+----.++-+|+.|++.+++
T Consensus 168 Ds----------a~~~~m~-------~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 168 DA----------QLGLFAK-------EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred cc----------HHHHHHH-------hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 22 1111222 34445442 2222335445444455677788999987765
No 494
>PRK07985 oxidoreductase; Provisional
Probab=44.10 E-value=2.5e+02 Score=27.35 Aligned_cols=80 Identities=11% Similarity=-0.008 Sum_probs=42.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC--cc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY--PL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~--~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.++...-..+.+.|. ..|..|++....- .. ........|.++..+..|-. |.+.+++.++...
T Consensus 50 k~vlITGas~gIG~aia~~L~-~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~ 123 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYA-REGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLS-----DEKFARSLVHEAH 123 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHH-HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCC-----CHHHHHHHHHHHH
Confidence 456666655555555666666 6787777643211 11 11222334666666666533 6777777776643
Q ss_pred hcCCCeeEEEE
Q 009517 266 AKGITVRALVV 276 (533)
Q Consensus 266 ~~g~~~~~iil 276 (533)
....+...++.
T Consensus 124 ~~~g~id~lv~ 134 (294)
T PRK07985 124 KALGGLDIMAL 134 (294)
T ss_pred HHhCCCCEEEE
Confidence 32224555543
No 495
>PRK08628 short chain dehydrogenase; Provisional
Probab=44.04 E-value=2.8e+02 Score=26.04 Aligned_cols=85 Identities=15% Similarity=0.043 Sum_probs=43.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
.....+++|.++...-..+.+.+. +.|-.|++..-.-.. ....+...+.++..++.|-. |.+.+++.+....
T Consensus 5 l~~~~ilItGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~ 78 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLA-EEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLT-----DDAQCRDAVEQTV 78 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-HcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHH
Confidence 333456666555444455555665 567555544322221 12222334666767766533 6777777776543
Q ss_pred hcCCCeeEEEEeC
Q 009517 266 AKGITVRALVVIN 278 (533)
Q Consensus 266 ~~g~~~~~iil~~ 278 (533)
+...++..||.+.
T Consensus 79 ~~~~~id~vi~~a 91 (258)
T PRK08628 79 AKFGRIDGLVNNA 91 (258)
T ss_pred HhcCCCCEEEECC
Confidence 3222456555443
No 496
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=44.04 E-value=2.4e+02 Score=25.21 Aligned_cols=98 Identities=9% Similarity=0.039 Sum_probs=46.8
Q ss_pred EEcCChHHHHHHHHHHhccCCCCeEEEcCCc-C--c---chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 194 FLTDGASPAVHMMMQLLIRSENDGILCPIPQ-Y--P---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 194 ~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~-~--~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
++|.|.-..-..+.+.+......+|++.... - . .....++..|.++..+..|-. |.+++++.+......
T Consensus 4 litGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~-----d~~~v~~~~~~~~~~ 78 (181)
T PF08659_consen 4 LITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVT-----DPEAVAAALAQLRQR 78 (181)
T ss_dssp EEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TT-----SHHHHHHHHHTSHTT
T ss_pred EEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCcc-----CHHHHHHHHHHHHhc
Confidence 3444333333334444442223455554444 1 1 133455667899999888743 789999999876555
Q ss_pred CCCeeEEEEeCCC--CCCccCCCHHHHHHHH
Q 009517 268 GITVRALVVINPG--NPTGQVLAEENQRAIV 296 (533)
Q Consensus 268 g~~~~~iil~~p~--NPtG~~~s~~~l~~i~ 296 (533)
.++...||-...- .-.-...+.+++++..
T Consensus 79 ~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~ 109 (181)
T PF08659_consen 79 FGPIDGVIHAAGVLADAPIQDQTPDEFDAVL 109 (181)
T ss_dssp SS-EEEEEE-------B-GCC--HHHHHHHH
T ss_pred cCCcceeeeeeeeecccccccCCHHHHHHHH
Confidence 5577777766332 2222234444454443
No 497
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=43.88 E-value=2.7e+02 Score=25.90 Aligned_cols=80 Identities=18% Similarity=0.081 Sum_probs=42.1
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
.+++|.++...-..+.+.++ ..|.+|++..-........ +...+.++..+..+- -|.+.++++++.....-
T Consensus 3 ~vlItGa~g~lG~~l~~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 76 (255)
T TIGR01963 3 TALVTGAASGIGLAIALALA-AAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADV-----TKEDEIADMIAAAAAEF 76 (255)
T ss_pred EEEEcCCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHhc
Confidence 35666555444555556666 5787777665433222222 222355565665553 36777777666543322
Q ss_pred CCeeEEEEe
Q 009517 269 ITVRALVVI 277 (533)
Q Consensus 269 ~~~~~iil~ 277 (533)
.+...|+.+
T Consensus 77 ~~~d~vi~~ 85 (255)
T TIGR01963 77 GGLDILVNN 85 (255)
T ss_pred CCCCEEEEC
Confidence 245555544
No 498
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=43.82 E-value=2.7e+02 Score=25.86 Aligned_cols=81 Identities=15% Similarity=0.098 Sum_probs=44.2
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.+. ..|..|++.. ..-.... ..+...+.++..+++|-. |.+.+.+.++....
T Consensus 7 ~~~lItG~s~~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 80 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALA-QEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS-----KVEDANRLVEEAVN 80 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHH-HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 345666555444455555565 5677776532 1111111 222334667777777643 67778777776543
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
..+++..|+.+
T Consensus 81 ~~~~id~vi~~ 91 (247)
T PRK12935 81 HFGKVDILVNN 91 (247)
T ss_pred HcCCCCEEEEC
Confidence 33356666655
No 499
>PRK07035 short chain dehydrogenase; Provisional
Probab=43.66 E-value=2.8e+02 Score=25.93 Aligned_cols=82 Identities=11% Similarity=0.084 Sum_probs=44.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.+. ..|..|++..-.-....... ...+.++..+.++-. |.+.+++.++...+
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 81 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLA-QQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG-----EMEQIDALFAHIRE 81 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3457777666666666666666 57877776654322222222 223555666665532 56777766665433
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
.-.+...++.+
T Consensus 82 ~~~~id~li~~ 92 (252)
T PRK07035 82 RHGRLDILVNN 92 (252)
T ss_pred HcCCCCEEEEC
Confidence 22245555533
No 500
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=43.60 E-value=2.8e+02 Score=26.00 Aligned_cols=80 Identities=13% Similarity=-0.023 Sum_probs=43.1
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HG-GTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
.|++|.|+...-..+.+.|. ..|..|++.............. .+ .++..+.+|-. |.+.+++++....+
T Consensus 4 ~ilItG~~~~IG~~la~~l~-~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~ 77 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLA-EEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT-----SEQSVLALSRGVDE 77 (259)
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCC-----CHHHHHHHHHHHHH
Confidence 46776666555555666666 5787776665443322222211 22 45666666533 56777777665433
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
...+..+++.+
T Consensus 78 ~~~~id~vv~~ 88 (259)
T PRK12384 78 IFGRVDLLVYN 88 (259)
T ss_pred HcCCCCEEEEC
Confidence 22245555544
Done!