Query 009517
Match_columns 533
No_of_seqs 395 out of 3497
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 06:58:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009517.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009517hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tcm_A Alanine aminotransferas 100.0 6.9E-64 2.4E-68 531.3 51.5 480 54-533 21-500 (500)
2 3ihj_A Alanine aminotransferas 100.0 7.3E-63 2.5E-67 522.7 46.6 472 54-532 21-498 (498)
3 1b5p_A Protein (aspartate amin 100.0 3.2E-51 1.1E-55 420.6 32.6 379 61-525 4-383 (385)
4 4h51_A Aspartate aminotransfer 100.0 3.9E-51 1.3E-55 420.7 29.9 388 62-530 18-420 (420)
5 3k7y_A Aspartate aminotransfer 100.0 1.8E-50 6.1E-55 415.8 34.4 379 67-526 7-404 (405)
6 3dyd_A Tyrosine aminotransfera 100.0 9.1E-50 3.1E-54 415.4 32.5 367 98-528 55-425 (427)
7 1j32_A Aspartate aminotransfer 100.0 3.5E-48 1.2E-52 398.1 37.2 384 61-527 3-387 (388)
8 3h14_A Aminotransferase, class 100.0 2.7E-48 9.3E-53 399.4 35.6 377 64-529 7-384 (391)
9 3aow_A Putative uncharacterize 100.0 6.7E-48 2.3E-52 403.3 37.4 388 61-529 54-447 (448)
10 3jtx_A Aminotransferase; NP_28 100.0 3.2E-48 1.1E-52 399.4 33.6 380 62-524 3-395 (396)
11 2x5d_A Probable aminotransfera 100.0 6.7E-48 2.3E-52 399.4 33.2 386 62-527 11-398 (412)
12 1xi9_A Putative transaminase; 100.0 1.2E-47 4.2E-52 396.7 33.9 387 61-529 12-405 (406)
13 3fvs_A Kynurenine--oxoglutarat 100.0 5.8E-48 2E-52 401.0 30.3 395 62-526 7-421 (422)
14 2r2n_A Kynurenine/alpha-aminoa 100.0 9.7E-48 3.3E-52 399.9 29.9 398 61-527 7-424 (425)
15 3b46_A Aminotransferase BNA3; 100.0 1.5E-47 5E-52 401.1 31.1 388 68-522 33-442 (447)
16 1gd9_A Aspartate aminotransfer 100.0 4.4E-47 1.5E-51 390.1 33.5 380 62-526 4-385 (389)
17 1o4s_A Aspartate aminotransfer 100.0 1.8E-46 6.3E-51 385.7 37.9 373 61-525 14-387 (389)
18 3ele_A Amino transferase; RER0 100.0 1.2E-46 4.2E-51 387.9 36.0 375 61-528 4-397 (398)
19 2o1b_A Aminotransferase, class 100.0 4.4E-47 1.5E-51 392.3 30.5 378 62-526 23-402 (404)
20 3qgu_A LL-diaminopimelate amin 100.0 1.2E-46 4E-51 394.5 32.4 384 59-528 37-441 (449)
21 3fdb_A Beta C-S lyase, putativ 100.0 5.8E-47 2E-51 387.3 29.3 363 79-526 11-375 (377)
22 3nra_A Aspartate aminotransfer 100.0 1.6E-46 5.5E-51 388.1 32.6 360 98-527 40-405 (407)
23 4f4e_A Aromatic-amino-acid ami 100.0 8.3E-47 2.8E-51 392.2 29.8 338 141-524 69-419 (420)
24 2dou_A Probable N-succinyldiam 100.0 2.1E-46 7.2E-51 383.3 32.3 366 71-524 8-375 (376)
25 3t18_A Aminotransferase class 100.0 8.5E-46 2.9E-50 383.7 37.2 388 62-529 9-412 (413)
26 3e2y_A Kynurenine-oxoglutarate 100.0 6.6E-47 2.3E-51 391.4 28.5 368 99-522 25-408 (410)
27 3rq1_A Aminotransferase class 100.0 5.5E-46 1.9E-50 385.7 34.5 383 69-527 17-415 (418)
28 2z61_A Probable aspartate amin 100.0 1.7E-45 5.9E-50 375.7 36.3 366 62-525 3-369 (370)
29 3ezs_A Aminotransferase ASPB; 100.0 2.6E-46 9E-51 382.4 30.0 367 68-526 4-374 (376)
30 2zc0_A Alanine glyoxylate tran 100.0 4.2E-45 1.4E-49 377.6 39.1 393 62-529 8-406 (407)
31 2o0r_A RV0858C (N-succinyldiam 100.0 4E-46 1.4E-50 385.9 30.2 358 99-528 27-397 (411)
32 3dzz_A Putative pyridoxal 5'-p 100.0 1E-45 3.6E-50 379.7 32.6 356 99-527 29-389 (391)
33 1u08_A Hypothetical aminotrans 100.0 2.9E-45 9.9E-50 376.2 35.8 351 99-522 32-385 (386)
34 7aat_A Aspartate aminotransfer 100.0 5.8E-46 2E-50 383.4 30.7 382 65-524 4-400 (401)
35 1yiz_A Kynurenine aminotransfe 100.0 1.1E-45 3.9E-50 384.7 33.1 370 99-525 39-427 (429)
36 2gb3_A Aspartate aminotransfer 100.0 2.1E-45 7.1E-50 380.4 34.6 382 58-529 13-404 (409)
37 3meb_A Aspartate aminotransfer 100.0 2E-45 6.9E-50 384.8 33.7 385 64-526 24-443 (448)
38 3kax_A Aminotransferase, class 100.0 2.5E-45 8.5E-50 375.9 33.5 370 77-524 9-382 (383)
39 3l8a_A METC, putative aminotra 100.0 4.2E-46 1.4E-50 387.1 27.7 354 99-525 63-420 (421)
40 1bw0_A TAT, protein (tyrosine 100.0 2.6E-45 8.8E-50 380.4 33.2 367 98-528 34-414 (416)
41 1vp4_A Aminotransferase, putat 100.0 2.5E-45 8.4E-50 381.7 32.3 366 99-530 45-421 (425)
42 1c7n_A Cystalysin; transferase 100.0 4.7E-45 1.6E-49 376.2 30.4 346 141-530 46-396 (399)
43 3g0t_A Putative aminotransfera 100.0 3.5E-44 1.2E-48 374.2 37.0 380 67-526 22-436 (437)
44 3ei9_A LL-diaminopimelate amin 100.0 4.5E-45 1.5E-49 380.6 30.2 380 59-525 24-426 (432)
45 1d2f_A MALY protein; aminotran 100.0 1.6E-44 5.3E-49 371.3 32.6 374 78-527 10-389 (390)
46 4dq6_A Putative pyridoxal phos 100.0 1.7E-44 5.8E-49 370.7 32.5 352 99-524 34-390 (391)
47 3fsl_A Aromatic-amino-acid ami 100.0 1.9E-44 6.4E-49 371.4 32.3 338 141-524 46-397 (397)
48 2zyj_A Alpha-aminodipate amino 100.0 6.8E-44 2.3E-48 367.4 32.6 341 141-529 49-395 (397)
49 1iay_A ACC synthase 2, 1-amino 100.0 8.9E-43 3.1E-47 362.8 40.6 345 160-526 76-426 (428)
50 3d6k_A Putative aminotransfera 100.0 2.7E-44 9.4E-49 373.5 29.1 375 76-530 21-421 (422)
51 3piu_A 1-aminocyclopropane-1-c 100.0 1.8E-43 6.2E-48 368.8 34.9 346 161-528 80-433 (435)
52 1v2d_A Glutamine aminotransfer 100.0 1.3E-43 4.4E-48 363.3 31.2 366 62-529 4-373 (381)
53 2x5f_A Aspartate_tyrosine_phen 100.0 7.7E-44 2.6E-48 371.0 29.4 339 145-527 69-429 (430)
54 3ppl_A Aspartate aminotransfer 100.0 5.7E-44 2E-48 371.7 27.3 328 159-530 70-423 (427)
55 1ajs_A Aspartate aminotransfer 100.0 2.1E-43 7.1E-48 365.6 31.3 384 62-526 6-410 (412)
56 4eu1_A Mitochondrial aspartate 100.0 3.7E-44 1.3E-48 371.0 25.2 372 63-524 18-408 (409)
57 3asa_A LL-diaminopimelate amin 100.0 1.4E-43 4.9E-48 365.4 27.2 382 61-531 3-397 (400)
58 3ez1_A Aminotransferase MOCR f 100.0 3.2E-43 1.1E-47 365.5 29.0 362 99-530 27-418 (423)
59 3g7q_A Valine-pyruvate aminotr 100.0 4.5E-43 1.5E-47 363.5 28.6 325 161-530 69-416 (417)
60 2zy4_A L-aspartate beta-decarb 100.0 2E-43 6.8E-48 376.8 26.2 347 141-532 118-527 (546)
61 3f6t_A Aspartate aminotransfer 100.0 9.3E-44 3.2E-48 379.2 22.3 355 141-532 117-530 (533)
62 1yaa_A Aspartate aminotransfer 100.0 1.3E-42 4.3E-47 359.8 29.9 342 141-526 49-410 (412)
63 3get_A Histidinol-phosphate am 100.0 4E-42 1.4E-46 350.0 32.4 331 99-524 32-364 (365)
64 3op7_A Aminotransferase class 100.0 9.8E-43 3.4E-47 355.9 27.9 327 146-529 46-373 (375)
65 3b1d_A Betac-S lyase; HET: PLP 100.0 2.3E-46 7.8E-51 385.3 0.0 373 76-525 14-391 (392)
66 3if2_A Aminotransferase; YP_26 100.0 2.7E-42 9.2E-47 360.8 28.8 330 161-529 77-442 (444)
67 2q7w_A Aspartate aminotransfer 100.0 3.6E-42 1.2E-46 354.2 28.8 339 141-524 46-396 (396)
68 3euc_A Histidinol-phosphate am 100.0 4.9E-41 1.7E-45 342.2 34.5 334 98-525 31-366 (367)
69 3ffh_A Histidinol-phosphate am 100.0 2.9E-41 9.8E-46 343.5 32.4 330 98-523 33-362 (363)
70 3ly1_A Putative histidinol-pho 100.0 3.6E-41 1.2E-45 341.4 31.7 336 97-526 16-351 (354)
71 1lc5_A COBD, L-threonine-O-3-p 100.0 8E-41 2.7E-45 340.4 31.9 321 141-527 39-360 (364)
72 2ay1_A Aroat, aromatic amino a 100.0 1.3E-40 4.4E-45 342.5 29.7 335 141-523 46-392 (394)
73 1fg7_A Histidinol phosphate am 100.0 2.9E-40 1E-44 335.3 29.8 300 160-522 52-353 (356)
74 3ftb_A Histidinol-phosphate am 100.0 1.3E-39 4.4E-44 330.8 33.7 318 141-525 41-359 (361)
75 3bwn_A AT1G70560, L-tryptophan 100.0 1.5E-41 5.1E-46 349.2 15.1 303 160-526 56-386 (391)
76 3cq5_A Histidinol-phosphate am 100.0 3.5E-38 1.2E-42 321.5 35.4 322 141-525 45-366 (369)
77 3fkd_A L-threonine-O-3-phospha 100.0 4.4E-39 1.5E-43 325.7 27.2 325 99-527 17-342 (350)
78 3p1t_A Putative histidinol-pho 100.0 3.7E-38 1.3E-42 317.0 31.0 305 141-525 31-335 (337)
79 2hox_A ALLIIN lyase 1; cystein 100.0 1.6E-40 5.6E-45 345.0 11.5 335 98-525 57-423 (427)
80 3hdo_A Histidinol-phosphate am 100.0 1.3E-37 4.5E-42 316.2 32.6 331 99-530 28-358 (360)
81 3a2b_A Serine palmitoyltransfe 100.0 1.1E-35 3.8E-40 306.1 34.0 329 141-527 59-392 (398)
82 1uu1_A Histidinol-phosphate am 100.0 1.8E-36 6.1E-41 304.8 25.1 301 141-523 34-334 (335)
83 2dr1_A PH1308 protein, 386AA l 100.0 1.8E-33 6.2E-38 287.9 33.3 325 138-529 29-381 (386)
84 3tqx_A 2-amino-3-ketobutyrate 100.0 4E-33 1.4E-37 286.8 33.2 329 141-527 59-396 (399)
85 1t3i_A Probable cysteine desul 100.0 2.1E-33 7.3E-38 290.7 30.9 324 141-529 41-415 (420)
86 1fc4_A 2-amino-3-ketobutyrate 100.0 2E-33 6.7E-38 289.5 29.7 327 141-527 61-397 (401)
87 1e5e_A MGL, methionine gamma-l 100.0 1.3E-33 4.4E-38 291.1 26.5 291 160-529 53-397 (404)
88 1vjo_A Alanine--glyoxylate ami 100.0 1.8E-33 6.2E-38 288.9 26.0 320 137-524 42-392 (393)
89 1kmj_A Selenocysteine lyase; p 100.0 6.2E-33 2.1E-37 285.7 29.7 323 141-527 36-405 (406)
90 1bs0_A Protein (8-amino-7-oxon 100.0 9.9E-33 3.4E-37 282.6 30.4 319 141-523 55-383 (384)
91 1eg5_A Aminotransferase; PLP-d 100.0 3.7E-33 1.3E-37 285.3 23.4 328 141-531 14-380 (384)
92 1sff_A 4-aminobutyrate aminotr 100.0 2.9E-33 9.8E-38 290.7 22.8 331 141-527 59-424 (426)
93 1elu_A L-cysteine/L-cystine C- 100.0 4E-33 1.4E-37 285.7 23.5 319 141-523 29-388 (390)
94 2w8t_A SPT, serine palmitoyltr 100.0 3.2E-32 1.1E-36 283.0 29.9 326 141-528 80-416 (427)
95 2bwn_A 5-aminolevulinate synth 100.0 2.6E-32 9E-37 281.2 28.9 328 141-527 62-400 (401)
96 3kki_A CAI-1 autoinducer synth 100.0 1.2E-31 4.2E-36 277.0 31.7 321 141-526 75-403 (409)
97 3i4j_A Aminotransferase, class 100.0 1.8E-32 6E-37 285.2 25.5 348 141-527 47-428 (430)
98 2huf_A Alanine glyoxylate amin 100.0 2.1E-32 7.3E-37 280.8 25.8 320 140-529 30-385 (393)
99 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 2.5E-33 8.5E-38 285.4 18.3 320 141-526 22-369 (371)
100 2ez2_A Beta-tyrosinase, tyrosi 100.0 2.1E-31 7.3E-36 279.2 32.8 375 64-527 9-431 (456)
101 2z9v_A Aspartate aminotransfer 100.0 9.6E-32 3.3E-36 275.9 29.0 321 141-528 21-372 (392)
102 2ch1_A 3-hydroxykynurenine tra 100.0 2.7E-32 9.3E-37 280.3 24.7 325 137-530 26-386 (396)
103 1svv_A Threonine aldolase; str 100.0 1.4E-31 4.6E-36 271.1 29.2 324 141-527 27-358 (359)
104 3cai_A Possible aminotransfera 100.0 1.2E-31 4.2E-36 276.5 26.9 328 141-522 39-404 (406)
105 3gju_A Putative aminotransfera 100.0 2.4E-31 8.3E-36 279.0 29.4 343 141-529 69-458 (460)
106 3zrp_A Serine-pyruvate aminotr 100.0 1E-31 3.4E-36 274.6 25.2 321 138-528 11-364 (384)
107 2eo5_A 419AA long hypothetical 100.0 1.3E-31 4.3E-36 277.8 25.5 325 141-527 61-418 (419)
108 3ruy_A Ornithine aminotransfer 100.0 4.7E-32 1.6E-36 278.4 21.5 308 141-524 54-391 (392)
109 4ffc_A 4-aminobutyrate aminotr 100.0 1E-31 3.6E-36 281.1 24.4 331 141-529 82-451 (453)
110 1iug_A Putative aspartate amin 100.0 1.6E-31 5.4E-36 269.9 23.4 316 139-527 11-348 (352)
111 3n5m_A Adenosylmethionine-8-am 100.0 3.3E-31 1.1E-35 277.4 26.5 337 141-526 67-451 (452)
112 4a6r_A Omega transaminase; tra 100.0 3.6E-31 1.2E-35 277.6 26.8 341 141-530 68-452 (459)
113 3nnk_A Ureidoglycine-glyoxylat 100.0 5.4E-31 1.8E-35 272.0 27.6 321 137-527 21-390 (411)
114 4eb5_A Probable cysteine desul 100.0 4E-31 1.4E-35 270.0 26.3 326 141-529 13-375 (382)
115 2eh6_A Acoat, acetylornithine 100.0 7.2E-32 2.5E-36 275.2 20.6 306 141-523 46-374 (375)
116 3f9t_A TDC, L-tyrosine decarbo 100.0 6.8E-31 2.3E-35 269.4 28.1 325 141-525 43-396 (397)
117 1zod_A DGD, 2,2-dialkylglycine 100.0 1.3E-31 4.6E-36 278.8 22.7 339 141-527 61-432 (433)
118 2aeu_A Hypothetical protein MJ 100.0 2.4E-30 8.1E-35 264.0 30.6 299 171-528 58-372 (374)
119 2dkj_A Serine hydroxymethyltra 100.0 1.3E-30 4.3E-35 268.9 29.0 352 76-526 11-387 (407)
120 4adb_A Succinylornithine trans 100.0 1.6E-31 5.4E-36 275.6 22.1 317 141-530 57-403 (406)
121 4hvk_A Probable cysteine desul 100.0 9E-31 3.1E-35 267.1 27.2 329 141-530 13-376 (382)
122 1m32_A 2-aminoethylphosphonate 100.0 3.4E-31 1.2E-35 268.7 23.9 319 141-526 16-364 (366)
123 3kgw_A Alanine-glyoxylate amin 100.0 3.7E-31 1.3E-35 271.2 24.3 323 137-528 31-389 (393)
124 3lvm_A Cysteine desulfurase; s 100.0 5.3E-31 1.8E-35 273.2 25.1 325 141-529 35-401 (423)
125 2yrr_A Aminotransferase, class 100.0 9.6E-31 3.3E-35 264.0 26.3 316 140-525 11-351 (353)
126 3i5t_A Aminotransferase; pyrid 100.0 1E-30 3.5E-35 275.0 26.3 337 141-530 72-457 (476)
127 1s0a_A Adenosylmethionine-8-am 100.0 8.6E-31 2.9E-35 272.4 24.8 326 141-527 61-424 (429)
128 2pb2_A Acetylornithine/succiny 100.0 6E-31 2E-35 272.8 23.4 315 141-527 75-418 (420)
129 3hmu_A Aminotransferase, class 100.0 9.2E-31 3.1E-35 274.9 24.4 338 141-530 73-455 (472)
130 2ord_A Acoat, acetylornithine 100.0 1.9E-31 6.3E-36 274.5 18.7 311 141-526 58-396 (397)
131 3isl_A Purine catabolism prote 100.0 7.9E-30 2.7E-34 263.6 29.9 299 170-527 43-390 (416)
132 1v72_A Aldolase; PLP-dependent 100.0 7.9E-31 2.7E-35 265.2 21.8 319 141-528 21-354 (356)
133 3dxv_A Alpha-amino-epsilon-cap 100.0 5E-31 1.7E-35 275.0 20.8 330 141-527 61-425 (439)
134 1ax4_A Tryptophanase; tryptoph 100.0 5.5E-30 1.9E-34 269.2 27.8 379 64-527 10-441 (467)
135 3nx3_A Acoat, acetylornithine 100.0 5.6E-31 1.9E-35 270.7 19.8 317 141-526 54-394 (395)
136 3l44_A Glutamate-1-semialdehyd 100.0 7.7E-31 2.6E-35 273.2 20.3 336 141-529 73-432 (434)
137 3f0h_A Aminotransferase; RER07 100.0 8.4E-30 2.9E-34 259.9 27.6 321 139-526 29-373 (376)
138 2bkw_A Alanine-glyoxylate amin 100.0 3.7E-30 1.3E-34 263.2 24.9 298 168-526 39-383 (385)
139 3oks_A 4-aminobutyrate transam 100.0 3.8E-30 1.3E-34 269.1 24.8 332 141-526 79-450 (451)
140 3k28_A Glutamate-1-semialdehyd 100.0 1.7E-31 5.8E-36 277.7 14.4 333 141-527 71-427 (429)
141 1vef_A Acetylornithine/acetyl- 100.0 1.6E-30 5.4E-35 267.3 21.2 312 141-524 63-394 (395)
142 1z7d_A Ornithine aminotransfer 100.0 1.8E-30 6.3E-35 270.1 21.1 319 141-530 83-432 (433)
143 3tfu_A Adenosylmethionine-8-am 100.0 6.1E-30 2.1E-34 267.7 24.4 327 141-528 93-454 (457)
144 1b9h_A AHBA synthase, protein 100.0 3E-29 1E-33 257.1 29.1 316 141-526 16-387 (388)
145 3dod_A Adenosylmethionine-8-am 100.0 6.5E-30 2.2E-34 267.3 24.4 335 141-528 62-444 (448)
146 2oga_A Transaminase; PLP-depen 100.0 4.5E-30 1.5E-34 264.4 22.5 314 141-527 43-396 (399)
147 1ibj_A CBL, cystathionine beta 100.0 7.7E-31 2.6E-35 274.1 16.3 305 160-526 124-461 (464)
148 3pj0_A LMO0305 protein; struct 100.0 2.1E-30 7.1E-35 262.8 18.7 316 141-523 28-358 (359)
149 3lws_A Aromatic amino acid bet 100.0 6.5E-30 2.2E-34 259.0 21.0 300 160-524 40-356 (357)
150 2oat_A Ornithine aminotransfer 100.0 1.2E-29 4E-34 264.5 23.3 315 141-526 94-438 (439)
151 2rfv_A Methionine gamma-lyase; 100.0 3.2E-29 1.1E-33 257.9 25.6 190 165-399 62-259 (398)
152 3ffr_A Phosphoserine aminotran 100.0 6.1E-29 2.1E-33 251.8 27.0 316 139-524 14-361 (362)
153 3a8u_X Omega-amino acid--pyruv 100.0 2.7E-29 9.3E-34 262.7 24.2 328 141-527 68-447 (449)
154 1jg8_A L-ALLO-threonine aldola 100.0 2.5E-29 8.4E-34 253.6 23.1 317 141-527 17-346 (347)
155 2po3_A 4-dehydrase; external a 100.0 3.3E-28 1.1E-32 252.5 30.6 318 141-528 31-387 (424)
156 1mdo_A ARNB aminotransferase; 100.0 1.5E-28 5.1E-33 252.2 27.4 316 141-531 19-390 (393)
157 2cy8_A D-phgat, D-phenylglycin 100.0 9.5E-29 3.2E-33 258.8 25.1 323 141-529 75-437 (453)
158 3fq8_A Glutamate-1-semialdehyd 100.0 5.7E-29 2E-33 258.5 22.0 326 141-526 70-426 (427)
159 3mad_A Sphingosine-1-phosphate 100.0 5.5E-28 1.9E-32 257.1 29.8 312 160-530 128-472 (514)
160 3vax_A Putative uncharacterize 100.0 9.5E-30 3.2E-34 261.7 14.4 326 141-526 33-399 (400)
161 2epj_A Glutamate-1-semialdehyd 100.0 1.1E-28 3.8E-33 256.9 22.6 326 141-528 74-432 (434)
162 2cjg_A L-lysine-epsilon aminot 100.0 6.5E-29 2.2E-33 259.6 20.8 323 141-527 72-448 (449)
163 3a9z_A Selenocysteine lyase; P 100.0 1.9E-28 6.3E-33 254.9 23.2 326 141-528 31-429 (432)
164 1w23_A Phosphoserine aminotran 100.0 3E-29 1E-33 254.2 16.7 316 141-526 15-359 (360)
165 3mc6_A Sphingosine-1-phosphate 100.0 3.9E-28 1.3E-32 257.2 25.5 332 141-529 77-439 (497)
166 3n0l_A Serine hydroxymethyltra 100.0 4.6E-27 1.6E-31 243.0 32.1 329 141-526 38-388 (417)
167 2oqx_A Tryptophanase; lyase, p 100.0 1.5E-28 5E-33 258.4 20.4 379 64-528 8-443 (467)
168 3uwc_A Nucleotide-sugar aminot 100.0 4E-28 1.4E-32 247.3 23.0 309 144-526 21-370 (374)
169 2vi8_A Serine hydroxymethyltra 100.0 2.8E-27 9.7E-32 243.6 29.3 331 141-527 36-387 (405)
170 2c81_A Glutamine-2-deoxy-scyll 100.0 2.7E-27 9.2E-32 245.1 27.9 326 141-528 15-415 (418)
171 1rv3_A Serine hydroxymethyltra 100.0 2E-27 6.9E-32 250.3 26.9 330 141-526 57-430 (483)
172 2e7u_A Glutamate-1-semialdehyd 100.0 6.9E-28 2.4E-32 250.1 22.5 321 141-524 70-424 (424)
173 3dr4_A Putative perosamine syn 100.0 1.5E-27 5E-32 244.9 24.1 321 99-524 24-390 (391)
174 2yky_A Beta-transaminase; tran 99.9 1.1E-30 3.7E-35 271.5 0.0 360 74-528 83-461 (465)
175 3ecd_A Serine hydroxymethyltra 100.0 2.8E-26 9.6E-31 237.6 33.1 329 141-527 45-397 (425)
176 1wyu_B Glycine dehydrogenase s 100.0 2.7E-27 9.2E-32 249.0 25.1 324 141-526 79-440 (474)
177 1cs1_A CGS, protein (cystathio 100.0 1.7E-26 6E-31 236.5 30.1 286 165-528 50-384 (386)
178 3ndn_A O-succinylhomoserine su 100.0 2E-26 6.9E-31 237.6 29.9 283 169-524 83-413 (414)
179 2fnu_A Aminotransferase; prote 100.0 1.3E-26 4.4E-31 236.1 27.2 314 141-527 12-372 (375)
180 1qz9_A Kynureninase; kynurenin 100.0 7.3E-27 2.5E-31 241.5 25.3 311 141-527 41-402 (416)
181 4e77_A Glutamate-1-semialdehyd 100.0 2.6E-27 8.7E-32 246.2 21.9 330 141-526 71-428 (429)
182 3gbx_A Serine hydroxymethyltra 100.0 1.4E-26 5E-31 239.4 26.9 325 141-526 43-395 (420)
183 2c0r_A PSAT, phosphoserine ami 100.0 2E-27 6.9E-32 241.1 19.5 314 141-527 16-361 (362)
184 3h7f_A Serine hydroxymethyltra 100.0 4.1E-26 1.4E-30 238.3 29.5 326 141-526 58-413 (447)
185 3cog_A Cystathionine gamma-lya 99.9 1.9E-26 6.6E-31 237.2 25.3 286 166-528 66-399 (403)
186 3frk_A QDTB; aminotransferase, 99.9 3.9E-27 1.3E-31 240.1 18.6 316 141-530 16-371 (373)
187 2dgk_A GAD-beta, GADB, glutama 99.9 7.6E-26 2.6E-30 236.7 28.8 336 141-529 55-436 (452)
188 1qgn_A Protein (cystathionine 99.9 5E-25 1.7E-29 228.5 33.5 285 168-526 115-444 (445)
189 1pff_A Methionine gamma-lyase; 99.9 6.6E-27 2.3E-31 234.3 18.7 183 171-398 2-193 (331)
190 3qhx_A Cystathionine gamma-syn 99.9 2.3E-25 7.7E-30 228.6 29.8 286 166-524 65-391 (392)
191 3e9k_A Kynureninase; kynurenin 99.9 2.2E-26 7.6E-31 241.7 22.5 292 170-527 114-461 (465)
192 3acz_A Methionine gamma-lyase; 99.9 3.6E-25 1.2E-29 226.9 30.2 282 166-525 58-387 (389)
193 1gc0_A Methionine gamma-lyase; 99.9 2E-25 7E-30 229.5 27.6 215 165-438 63-285 (398)
194 2fyf_A PSAT, phosphoserine ami 99.9 4.6E-26 1.6E-30 234.3 22.2 312 141-526 52-397 (398)
195 1o69_A Aminotransferase; struc 99.9 6.9E-25 2.4E-29 225.2 30.3 325 141-530 11-390 (394)
196 2cb1_A O-acetyl homoserine sul 99.9 1.3E-24 4.4E-29 224.6 32.2 227 160-442 47-306 (412)
197 1ohv_A 4-aminobutyrate aminotr 99.9 3.7E-26 1.3E-30 240.0 20.7 328 141-527 81-471 (472)
198 3nyt_A Aminotransferase WBPE; 99.9 1.9E-26 6.6E-31 234.5 17.8 306 141-522 15-359 (367)
199 3ke3_A Putative serine-pyruvat 99.9 1.5E-24 5.1E-29 221.5 31.0 303 169-528 33-377 (379)
200 4ao9_A Beta-phenylalanine amin 99.9 9.7E-27 3.3E-31 240.1 12.8 383 50-528 48-447 (454)
201 3hbx_A GAD 1, glutamate decarb 99.9 1.6E-24 5.4E-29 229.2 29.3 335 141-529 69-446 (502)
202 2okj_A Glutamate decarboxylase 99.9 2.6E-24 9.1E-29 228.1 30.2 332 160-527 121-502 (504)
203 1js3_A DDC;, DOPA decarboxylas 99.9 1.3E-23 4.4E-28 221.8 34.4 338 142-530 88-477 (486)
204 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 7.8E-24 2.7E-28 220.4 31.7 311 141-525 42-434 (437)
205 3vp6_A Glutamate decarboxylase 99.9 5.5E-24 1.9E-28 225.4 31.0 345 146-531 114-509 (511)
206 1n8p_A Cystathionine gamma-lya 99.9 5.8E-25 2E-29 225.5 22.2 213 166-438 54-276 (393)
207 3ri6_A O-acetylhomoserine sulf 99.9 5.5E-24 1.9E-28 219.9 28.3 287 167-524 82-429 (430)
208 3ju7_A Putative PLP-dependent 99.9 2.9E-23 9.9E-28 211.6 27.9 316 141-526 15-374 (377)
209 4e1o_A HDC, histidine decarbox 99.9 2.3E-22 7.7E-27 211.7 34.6 337 143-528 94-479 (481)
210 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.4E-24 8.1E-29 224.6 19.0 287 163-527 53-353 (446)
211 3nmy_A Xometc, cystathionine g 99.9 4.8E-23 1.7E-27 211.3 27.6 284 169-525 69-397 (400)
212 2qma_A Diaminobutyrate-pyruvat 99.9 7.9E-23 2.7E-27 216.3 30.0 340 141-527 113-496 (497)
213 2fq6_A Cystathionine beta-lyas 99.9 1.4E-23 4.7E-28 216.3 21.0 213 169-440 84-304 (415)
214 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.4E-23 8.1E-28 217.8 22.2 306 169-524 131-455 (456)
215 3k40_A Aromatic-L-amino-acid d 99.9 6E-22 2.1E-26 208.0 32.1 324 160-529 102-473 (475)
216 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2.6E-22 8.8E-27 205.7 28.5 310 140-520 13-389 (390)
217 2a7v_A Serine hydroxymethyltra 99.9 4.8E-22 1.6E-26 207.7 30.9 329 141-527 67-441 (490)
218 1wyu_A Glycine dehydrogenase ( 99.9 2.8E-23 9.7E-28 216.3 21.4 293 166-524 103-437 (438)
219 4atq_A 4-aminobutyrate transam 99.9 1E-23 3.6E-28 218.5 17.9 372 76-526 49-454 (456)
220 2ctz_A O-acetyl-L-homoserine s 99.9 3.1E-22 1.1E-26 207.1 28.8 227 161-442 50-314 (421)
221 4e3q_A Pyruvate transaminase; 99.9 2.2E-22 7.6E-27 209.3 27.5 370 76-530 52-471 (473)
222 2jis_A Cysteine sulfinic acid 99.9 9E-22 3.1E-26 209.0 31.5 324 161-526 138-514 (515)
223 3ht4_A Aluminum resistance pro 99.9 1.4E-21 4.7E-26 202.1 22.9 229 172-443 66-313 (431)
224 3jzl_A Putative cystathionine 99.9 6.2E-21 2.1E-25 195.5 24.3 247 142-443 32-307 (409)
225 3i16_A Aluminum resistance pro 99.9 1.2E-20 4.1E-25 194.0 25.9 230 162-444 69-325 (427)
226 3hvy_A Cystathionine beta-lyas 99.9 1.4E-20 4.9E-25 193.5 25.4 230 161-444 69-325 (427)
227 1c4k_A Protein (ornithine deca 99.9 7E-21 2.4E-25 207.5 19.8 317 169-528 175-567 (730)
228 2vyc_A Biodegradative arginine 99.8 6.1E-20 2.1E-24 201.9 23.7 175 169-365 207-399 (755)
229 4a0g_A Adenosylmethionine-8-am 99.8 1.1E-18 3.8E-23 193.2 17.0 343 141-527 399-828 (831)
230 3n75_A LDC, lysine decarboxyla 99.8 1.5E-17 5.2E-22 179.8 20.7 230 167-436 195-442 (715)
231 3e77_A Phosphoserine aminotran 99.7 1.9E-17 6.6E-22 167.1 14.5 315 138-526 22-374 (377)
232 3qm2_A Phosphoserine aminotran 99.7 1.7E-17 5.7E-22 168.5 13.8 315 137-526 35-384 (386)
233 3m5u_A Phosphoserine aminotran 99.7 2.3E-16 7.8E-21 158.7 20.8 311 140-526 16-359 (361)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 1.3E-13 4.6E-18 138.7 26.6 320 170-531 115-465 (501)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 3.6E-12 1.2E-16 130.1 28.2 244 168-443 95-347 (450)
236 3ou5_A Serine hydroxymethyltra 99.5 2.7E-12 9.2E-17 128.8 26.0 332 141-525 67-439 (490)
237 4fgs_A Probable dehydrogenase 84.8 5.3 0.00018 37.5 10.3 101 191-298 30-133 (273)
238 3rwb_A TPLDH, pyridoxal 4-dehy 82.0 7.2 0.00025 35.7 9.9 103 190-298 6-110 (247)
239 4g81_D Putative hexonate dehyd 79.8 16 0.00056 33.7 11.4 104 188-298 7-116 (255)
240 4dqx_A Probable oxidoreductase 79.3 13 0.00043 34.7 10.8 102 189-297 26-130 (277)
241 3h7a_A Short chain dehydrogena 79.1 26 0.00091 31.9 12.8 100 190-297 7-112 (252)
242 4e6p_A Probable sorbitol dehyd 78.8 14 0.00048 33.9 10.8 102 190-297 8-111 (259)
243 3gem_A Short chain dehydrogena 78.1 14 0.00047 34.1 10.5 100 189-297 26-127 (260)
244 3gvc_A Oxidoreductase, probabl 77.1 11 0.00037 35.3 9.5 101 191-298 30-133 (277)
245 4eso_A Putative oxidoreductase 77.0 14 0.00048 33.9 10.2 102 190-298 8-112 (255)
246 3grp_A 3-oxoacyl-(acyl carrier 76.8 12 0.00042 34.6 9.8 101 190-297 27-130 (266)
247 3tpc_A Short chain alcohol deh 76.8 12 0.0004 34.4 9.6 101 190-297 7-114 (257)
248 3n74_A 3-ketoacyl-(acyl-carrie 76.5 15 0.00052 33.6 10.3 103 189-297 8-113 (261)
249 3lyl_A 3-oxoacyl-(acyl-carrier 75.6 26 0.00088 31.7 11.6 102 190-297 5-111 (247)
250 3l6e_A Oxidoreductase, short-c 75.1 13 0.00045 33.6 9.3 101 192-298 5-107 (235)
251 3pxx_A Carveol dehydrogenase; 75.0 12 0.00041 34.8 9.3 100 191-297 11-126 (287)
252 3tzq_B Short-chain type dehydr 74.9 21 0.00073 33.0 11.0 101 190-297 11-116 (271)
253 3m1a_A Putative dehydrogenase; 74.8 15 0.0005 34.2 9.8 100 191-297 6-108 (281)
254 3gaf_A 7-alpha-hydroxysteroid 74.4 18 0.00061 33.2 10.2 101 190-297 12-117 (256)
255 2o23_A HADH2 protein; HSD17B10 74.4 31 0.0011 31.4 11.9 82 190-277 12-93 (265)
256 4ibo_A Gluconate dehydrogenase 73.8 24 0.00083 32.6 11.0 103 188-297 24-132 (271)
257 4iin_A 3-ketoacyl-acyl carrier 73.5 17 0.00059 33.6 9.9 105 187-297 26-136 (271)
258 3ppi_A 3-hydroxyacyl-COA dehyd 73.3 25 0.00087 32.5 11.1 100 191-297 31-138 (281)
259 4gkb_A 3-oxoacyl-[acyl-carrier 73.1 32 0.0011 31.7 11.5 104 188-298 5-112 (258)
260 3sc4_A Short chain dehydrogena 73.1 38 0.0013 31.5 12.3 102 189-297 8-122 (285)
261 3rih_A Short chain dehydrogena 72.9 33 0.0011 32.1 11.9 102 190-298 41-149 (293)
262 4fn4_A Short chain dehydrogena 72.3 21 0.00071 33.0 9.9 101 191-298 8-115 (254)
263 2ew8_A (S)-1-phenylethanol deh 72.0 31 0.0011 31.3 11.2 100 191-297 8-111 (249)
264 3op4_A 3-oxoacyl-[acyl-carrier 71.8 20 0.00069 32.6 9.8 101 190-297 9-112 (248)
265 4dmm_A 3-oxoacyl-[acyl-carrier 70.9 20 0.00069 33.1 9.7 103 189-298 27-136 (269)
266 3tfo_A Putative 3-oxoacyl-(acy 70.0 32 0.0011 31.7 10.8 100 192-298 6-111 (264)
267 4fc7_A Peroxisomal 2,4-dienoyl 70.0 36 0.0012 31.5 11.3 101 191-298 28-135 (277)
268 1hxh_A 3BETA/17BETA-hydroxyste 69.5 32 0.0011 31.3 10.7 100 191-297 7-109 (253)
269 3kvo_A Hydroxysteroid dehydrog 68.8 55 0.0019 31.5 12.6 100 191-297 46-158 (346)
270 3ksu_A 3-oxoacyl-acyl carrier 68.7 70 0.0024 29.2 13.4 102 189-297 10-120 (262)
271 3ged_A Short-chain dehydrogena 68.6 21 0.00073 32.7 9.1 99 192-298 4-105 (247)
272 3edm_A Short chain dehydrogena 68.5 47 0.0016 30.3 11.6 101 190-297 8-116 (259)
273 3is3_A 17BETA-hydroxysteroid d 68.2 21 0.00073 32.9 9.2 100 191-297 19-125 (270)
274 1vl8_A Gluconate 5-dehydrogena 67.7 37 0.0013 31.2 10.8 100 191-297 22-128 (267)
275 1fmc_A 7 alpha-hydroxysteroid 67.4 50 0.0017 29.7 11.6 102 190-297 11-116 (255)
276 4dyv_A Short-chain dehydrogena 67.3 25 0.00086 32.6 9.5 100 192-298 30-133 (272)
277 3uve_A Carveol dehydrogenase ( 67.3 23 0.0008 32.9 9.4 101 190-297 11-134 (286)
278 3t7c_A Carveol dehydrogenase; 67.3 27 0.00093 32.8 9.9 102 190-298 28-148 (299)
279 3nyw_A Putative oxidoreductase 67.0 24 0.00084 32.1 9.3 100 191-297 8-115 (250)
280 3sx2_A Putative 3-ketoacyl-(ac 66.9 26 0.00091 32.3 9.7 99 190-297 13-127 (278)
281 3e03_A Short chain dehydrogena 66.9 61 0.0021 29.8 12.2 103 188-297 4-119 (274)
282 2c07_A 3-oxoacyl-(acyl-carrier 66.5 68 0.0023 29.6 12.5 101 191-297 45-150 (285)
283 3v2g_A 3-oxoacyl-[acyl-carrier 66.2 31 0.0011 31.9 9.9 104 188-298 29-139 (271)
284 3tsc_A Putative oxidoreductase 66.2 29 0.00098 32.1 9.7 102 190-298 11-131 (277)
285 3r1i_A Short-chain type dehydr 66.1 41 0.0014 31.1 10.8 103 188-297 30-138 (276)
286 3rkr_A Short chain oxidoreduct 65.8 44 0.0015 30.5 10.8 101 191-297 30-136 (262)
287 3ucx_A Short chain dehydrogena 65.2 40 0.0014 30.8 10.5 102 190-298 11-119 (264)
288 3imf_A Short chain dehydrogena 65.0 43 0.0015 30.5 10.6 101 191-298 7-113 (257)
289 3qlj_A Short chain dehydrogena 65.0 32 0.0011 32.7 10.0 101 191-298 28-144 (322)
290 3s55_A Putative short-chain de 64.8 45 0.0015 30.8 10.9 101 190-297 10-128 (281)
291 3sju_A Keto reductase; short-c 64.4 38 0.0013 31.3 10.2 100 191-297 25-130 (279)
292 3osu_A 3-oxoacyl-[acyl-carrier 64.4 35 0.0012 30.9 9.7 99 192-297 6-111 (246)
293 3tjr_A Short chain dehydrogena 64.3 41 0.0014 31.6 10.5 100 191-297 32-137 (301)
294 3zv4_A CIS-2,3-dihydrobiphenyl 64.0 27 0.00094 32.4 9.1 83 190-279 5-87 (281)
295 1hdc_A 3-alpha, 20 beta-hydrox 63.8 34 0.0012 31.2 9.6 100 191-297 6-108 (254)
296 3ezl_A Acetoacetyl-COA reducta 63.8 40 0.0014 30.5 10.1 100 191-297 14-120 (256)
297 3zu3_A Putative reductase YPO4 63.7 1.2E+02 0.004 30.0 13.9 82 191-279 47-145 (405)
298 2jah_A Clavulanic acid dehydro 63.5 49 0.0017 29.9 10.6 100 191-297 8-113 (247)
299 3v2h_A D-beta-hydroxybutyrate 63.5 54 0.0018 30.4 11.1 102 190-298 25-134 (281)
300 3qiv_A Short-chain dehydrogena 63.1 41 0.0014 30.4 10.0 102 189-297 8-118 (253)
301 3oec_A Carveol dehydrogenase ( 63.0 35 0.0012 32.4 9.8 100 191-297 47-164 (317)
302 3pgx_A Carveol dehydrogenase; 62.9 33 0.0011 31.7 9.5 101 190-297 15-134 (280)
303 3lf2_A Short chain oxidoreduct 62.8 54 0.0019 29.9 10.9 104 188-298 6-117 (265)
304 3gh5_A HEX1, beta-hexosaminida 62.3 13 0.00044 38.3 6.8 115 184-308 124-274 (525)
305 2rhc_B Actinorhodin polyketide 62.2 61 0.0021 29.9 11.2 100 191-297 23-128 (277)
306 3ijr_A Oxidoreductase, short c 62.0 52 0.0018 30.6 10.7 102 190-298 47-156 (291)
307 4egf_A L-xylulose reductase; s 61.8 40 0.0014 30.9 9.8 102 191-298 21-128 (266)
308 4imr_A 3-oxoacyl-(acyl-carrier 61.7 62 0.0021 29.8 11.1 102 188-297 31-138 (275)
309 3o38_A Short chain dehydrogena 61.5 41 0.0014 30.7 9.8 103 190-298 22-131 (266)
310 3uf0_A Short-chain dehydrogena 61.5 90 0.0031 28.6 12.2 102 188-298 29-136 (273)
311 3ai3_A NADPH-sorbose reductase 61.3 57 0.002 29.6 10.8 101 190-297 7-114 (263)
312 1x1t_A D(-)-3-hydroxybutyrate 61.3 57 0.0019 29.6 10.7 99 192-297 6-112 (260)
313 1w6u_A 2,4-dienoyl-COA reducta 61.1 63 0.0021 30.0 11.2 101 191-297 27-133 (302)
314 3rjz_A N-type ATP pyrophosphat 61.0 41 0.0014 30.6 9.2 101 192-308 7-121 (237)
315 1geg_A Acetoin reductase; SDR 60.6 63 0.0022 29.2 10.9 99 192-297 4-108 (256)
316 3l77_A Short-chain alcohol deh 59.8 34 0.0012 30.5 8.7 101 192-298 4-110 (235)
317 1uls_A Putative 3-oxoacyl-acyl 59.8 48 0.0017 29.9 9.8 99 191-298 6-107 (245)
318 2ae2_A Protein (tropinone redu 59.4 87 0.003 28.3 11.6 101 190-297 9-116 (260)
319 3ftp_A 3-oxoacyl-[acyl-carrier 59.3 53 0.0018 30.2 10.2 101 191-298 29-135 (270)
320 1yb1_A 17-beta-hydroxysteroid 59.0 60 0.002 29.7 10.5 83 189-277 30-115 (272)
321 2uvd_A 3-oxoacyl-(acyl-carrier 59.0 64 0.0022 29.0 10.5 100 191-297 5-111 (246)
322 3oid_A Enoyl-[acyl-carrier-pro 59.0 65 0.0022 29.3 10.6 100 192-298 6-112 (258)
323 1nff_A Putative oxidoreductase 58.9 54 0.0018 29.9 10.1 100 191-297 8-110 (260)
324 3gdg_A Probable NADP-dependent 58.6 49 0.0017 30.1 9.8 103 189-297 19-130 (267)
325 3ak4_A NADH-dependent quinucli 58.6 50 0.0017 30.1 9.8 100 191-297 13-115 (263)
326 2pnf_A 3-oxoacyl-[acyl-carrier 58.5 89 0.0031 27.8 11.5 102 190-297 7-114 (248)
327 2a4k_A 3-oxoacyl-[acyl carrier 58.2 37 0.0013 31.1 8.8 100 191-297 7-109 (263)
328 3v8b_A Putative dehydrogenase, 58.0 63 0.0021 29.9 10.5 100 191-297 29-135 (283)
329 3r3s_A Oxidoreductase; structu 58.0 57 0.0019 30.4 10.2 102 190-298 49-159 (294)
330 1iy8_A Levodione reductase; ox 57.7 67 0.0023 29.3 10.5 100 191-297 14-122 (267)
331 2q2v_A Beta-D-hydroxybutyrate 57.6 88 0.003 28.2 11.3 100 191-297 5-108 (255)
332 1h5q_A NADP-dependent mannitol 57.6 1.1E+02 0.0037 27.5 12.0 100 191-297 15-121 (265)
333 3awd_A GOX2181, putative polyo 57.3 78 0.0027 28.5 10.9 102 190-297 13-120 (260)
334 3pk0_A Short-chain dehydrogena 57.3 57 0.002 29.7 10.0 101 190-297 10-117 (262)
335 3cxt_A Dehydrogenase with diff 57.3 70 0.0024 29.8 10.7 101 190-297 34-140 (291)
336 3tox_A Short chain dehydrogena 56.5 66 0.0023 29.7 10.3 101 191-298 9-116 (280)
337 1ae1_A Tropinone reductase-I; 56.4 1E+02 0.0034 28.2 11.6 101 190-297 21-128 (273)
338 1zk4_A R-specific alcohol dehy 56.0 78 0.0027 28.3 10.6 101 191-297 7-111 (251)
339 2wsb_A Galactitol dehydrogenas 55.7 73 0.0025 28.6 10.4 101 190-297 11-114 (254)
340 2cfc_A 2-(R)-hydroxypropyl-COM 55.5 55 0.0019 29.3 9.4 100 192-297 4-112 (250)
341 3a28_C L-2.3-butanediol dehydr 55.2 70 0.0024 28.9 10.2 99 192-297 4-110 (258)
342 2z1n_A Dehydrogenase; reductas 55.1 1.1E+02 0.0039 27.5 11.6 99 191-297 8-114 (260)
343 3u5t_A 3-oxoacyl-[acyl-carrier 55.0 56 0.0019 30.0 9.5 101 191-298 28-135 (267)
344 1zem_A Xylitol dehydrogenase; 54.7 83 0.0028 28.6 10.6 100 191-297 8-114 (262)
345 3afn_B Carbonyl reductase; alp 53.7 1.1E+02 0.0037 27.4 11.2 101 191-297 8-115 (258)
346 3rd5_A Mypaa.01249.C; ssgcid, 53.4 31 0.001 32.2 7.4 68 190-263 16-83 (291)
347 1xkq_A Short-chain reductase f 53.1 81 0.0028 29.0 10.3 100 191-297 7-119 (280)
348 1oaa_A Sepiapterin reductase; 51.4 1.4E+02 0.0047 26.9 12.0 102 191-298 7-125 (259)
349 1xhl_A Short-chain dehydrogena 51.2 90 0.0031 29.1 10.4 100 191-297 27-137 (297)
350 3u9l_A 3-oxoacyl-[acyl-carrier 50.6 95 0.0032 29.4 10.6 99 192-297 7-116 (324)
351 3inp_A D-ribulose-phosphate 3- 50.6 1.2E+02 0.0042 27.5 10.7 81 216-309 111-201 (246)
352 3tl3_A Short-chain type dehydr 49.7 38 0.0013 30.8 7.3 97 191-298 10-113 (257)
353 3svt_A Short-chain type dehydr 49.5 93 0.0032 28.6 10.1 102 189-297 10-121 (281)
354 3kzv_A Uncharacterized oxidore 49.5 70 0.0024 28.9 9.1 100 193-298 4-109 (254)
355 4b79_A PA4098, probable short- 49.2 46 0.0016 30.3 7.6 94 191-298 12-106 (242)
356 3ek2_A Enoyl-(acyl-carrier-pro 49.2 95 0.0033 28.1 10.1 102 188-297 12-126 (271)
357 3f1l_A Uncharacterized oxidore 48.9 1.3E+02 0.0046 26.9 11.0 103 191-298 13-123 (252)
358 2b4q_A Rhamnolipids biosynthes 48.9 1.1E+02 0.0036 28.2 10.4 99 191-297 30-134 (276)
359 3guy_A Short-chain dehydrogena 48.7 45 0.0015 29.7 7.5 97 192-298 3-102 (230)
360 3ioy_A Short-chain dehydrogena 48.6 84 0.0029 29.7 9.8 100 191-297 9-116 (319)
361 1edo_A Beta-keto acyl carrier 48.6 1.4E+02 0.0049 26.3 11.2 99 193-297 4-108 (244)
362 3gk3_A Acetoacetyl-COA reducta 48.5 1.2E+02 0.004 27.6 10.6 100 192-297 27-132 (269)
363 3f9i_A 3-oxoacyl-[acyl-carrier 48.4 38 0.0013 30.5 7.1 69 189-263 13-81 (249)
364 3t4x_A Oxidoreductase, short c 48.1 1E+02 0.0034 28.1 10.0 97 190-297 10-114 (267)
365 4iiu_A 3-oxoacyl-[acyl-carrier 48.0 83 0.0028 28.6 9.5 100 191-297 27-133 (267)
366 2d1y_A Hypothetical protein TT 48.0 1.4E+02 0.0049 26.7 11.1 97 191-297 7-106 (256)
367 2bd0_A Sepiapterin reductase; 47.9 1.1E+02 0.0039 27.0 10.3 100 192-297 4-115 (244)
368 2x9g_A PTR1, pteridine reducta 47.5 88 0.003 28.8 9.7 82 191-279 24-114 (288)
369 1spx_A Short-chain reductase f 47.3 73 0.0025 29.2 9.0 81 192-279 8-94 (278)
370 3s8m_A Enoyl-ACP reductase; ro 47.1 2.2E+02 0.0077 28.1 13.4 44 230-279 116-160 (422)
371 2bgk_A Rhizome secoisolaricire 46.8 1.3E+02 0.0043 27.3 10.6 100 191-297 17-123 (278)
372 2yvq_A Carbamoyl-phosphate syn 46.8 86 0.0029 25.8 8.3 109 187-309 21-131 (143)
373 1o5k_A DHDPS, dihydrodipicolin 46.6 95 0.0032 29.3 9.7 78 192-296 83-163 (306)
374 4e3z_A Putative oxidoreductase 46.1 1.5E+02 0.005 27.0 10.9 99 192-297 28-134 (272)
375 3i1j_A Oxidoreductase, short c 46.1 1.2E+02 0.0041 27.0 10.1 102 191-297 15-124 (247)
376 1ja9_A 4HNR, 1,3,6,8-tetrahydr 45.6 1.4E+02 0.0046 27.0 10.6 100 191-297 22-128 (274)
377 1xq1_A Putative tropinone redu 45.5 1.4E+02 0.0049 26.8 10.7 101 191-297 15-121 (266)
378 1xky_A Dihydrodipicolinate syn 45.4 1.3E+02 0.0046 28.1 10.5 87 192-309 83-173 (301)
379 2hmc_A AGR_L_411P, dihydrodipi 44.9 96 0.0033 29.9 9.5 89 192-309 94-186 (344)
380 3qp9_A Type I polyketide synth 44.8 90 0.0031 32.0 9.9 102 189-297 249-371 (525)
381 1gee_A Glucose 1-dehydrogenase 44.7 1.2E+02 0.0043 27.1 10.1 101 191-297 8-114 (261)
382 2qq5_A DHRS1, dehydrogenase/re 44.5 1.1E+02 0.0036 27.7 9.6 82 191-279 6-91 (260)
383 4dry_A 3-oxoacyl-[acyl-carrier 44.5 1.1E+02 0.0039 28.0 9.9 101 191-298 34-142 (281)
384 2vc6_A MOSA, dihydrodipicolina 44.5 1.4E+02 0.0048 27.9 10.4 87 192-309 71-162 (292)
385 2zat_A Dehydrogenase/reductase 44.4 1.4E+02 0.0048 26.8 10.4 100 191-297 15-121 (260)
386 3asu_A Short-chain dehydrogena 44.4 68 0.0023 28.9 8.1 98 193-297 3-104 (248)
387 1yxm_A Pecra, peroxisomal tran 44.3 1.4E+02 0.0048 27.6 10.6 100 191-297 19-129 (303)
388 2ph3_A 3-oxoacyl-[acyl carrier 44.0 1.5E+02 0.0052 26.1 10.5 100 192-297 3-109 (245)
389 2hq1_A Glucose/ribitol dehydro 43.3 1.1E+02 0.0036 27.3 9.3 79 191-275 6-88 (247)
390 1g0o_A Trihydroxynaphthalene r 43.0 1.9E+02 0.0064 26.4 11.2 100 191-297 30-136 (283)
391 2dtx_A Glucose 1-dehydrogenase 42.6 1E+02 0.0035 28.0 9.1 92 191-297 9-103 (264)
392 2nu8_A Succinyl-COA ligase [AD 42.4 49 0.0017 31.0 6.9 74 223-312 51-124 (288)
393 4hp8_A 2-deoxy-D-gluconate 3-d 42.2 34 0.0012 31.4 5.5 95 192-298 10-109 (247)
394 2yxg_A DHDPS, dihydrodipicolin 41.8 62 0.0021 30.3 7.4 78 192-296 71-151 (289)
395 2ehh_A DHDPS, dihydrodipicolin 41.3 78 0.0027 29.7 8.1 77 192-296 71-151 (294)
396 3dii_A Short-chain dehydrogena 41.3 1E+02 0.0035 27.6 8.9 99 192-298 4-105 (247)
397 3ctm_A Carbonyl reductase; alc 40.9 97 0.0033 28.3 8.7 82 190-277 34-118 (279)
398 2ehd_A Oxidoreductase, oxidore 40.8 1.2E+02 0.0042 26.6 9.2 99 192-297 7-107 (234)
399 3b4u_A Dihydrodipicolinate syn 40.3 63 0.0021 30.4 7.2 79 192-296 74-158 (294)
400 1xg5_A ARPG836; short chain de 40.2 1.8E+02 0.0061 26.5 10.5 101 191-297 33-140 (279)
401 2rfg_A Dihydrodipicolinate syn 40.1 1.1E+02 0.0039 28.6 9.1 88 192-309 71-161 (297)
402 2ojp_A DHDPS, dihydrodipicolin 40.0 1.4E+02 0.0047 27.9 9.6 77 192-296 72-152 (292)
403 2wkj_A N-acetylneuraminate lya 39.9 50 0.0017 31.2 6.5 79 193-297 83-164 (303)
404 1wma_A Carbonyl reductase [NAD 39.8 1.7E+02 0.0057 26.2 10.2 80 192-277 6-89 (276)
405 1tks_A 3,4-dihydroxy-2-butanon 39.3 53 0.0018 29.0 5.9 39 267-308 156-194 (204)
406 1jak_A Beta-N-acetylhexosamini 39.3 42 0.0015 34.4 6.2 68 231-308 182-249 (512)
407 2gjx_A Beta-hexosaminidase alp 39.1 40 0.0014 34.6 6.0 107 188-308 98-233 (507)
408 3fkr_A L-2-keto-3-deoxyarabona 39.0 1.3E+02 0.0046 28.3 9.4 90 192-310 79-173 (309)
409 3i4f_A 3-oxoacyl-[acyl-carrier 38.7 1.4E+02 0.0048 26.9 9.4 100 191-297 8-116 (264)
410 3icc_A Putative 3-oxoacyl-(acy 38.6 1.5E+02 0.0052 26.3 9.6 100 191-297 8-120 (255)
411 2pd6_A Estradiol 17-beta-dehyd 38.2 1.4E+02 0.0047 26.8 9.2 100 191-297 8-121 (264)
412 3ovp_A Ribulose-phosphate 3-ep 38.1 2.2E+02 0.0075 25.4 11.7 27 283-309 148-175 (228)
413 3rku_A Oxidoreductase YMR226C; 37.9 66 0.0023 29.9 7.0 101 191-298 34-146 (287)
414 1mxh_A Pteridine reductase 2; 37.8 1.3E+02 0.0045 27.3 9.1 81 192-279 13-102 (276)
415 3i6i_A Putative leucoanthocyan 37.7 1E+02 0.0034 29.3 8.5 97 191-307 11-115 (346)
416 3p19_A BFPVVD8, putative blue 37.7 2.2E+02 0.0076 25.7 10.6 97 191-297 17-116 (266)
417 2yv2_A Succinyl-COA synthetase 37.1 65 0.0022 30.3 6.8 76 222-313 56-132 (297)
418 2r8w_A AGR_C_1641P; APC7498, d 36.9 1E+02 0.0035 29.5 8.3 88 193-310 106-196 (332)
419 2nuw_A 2-keto-3-deoxygluconate 36.7 1E+02 0.0035 28.8 8.1 93 170-295 51-147 (288)
420 3nrc_A Enoyl-[acyl-carrier-pro 36.3 1.9E+02 0.0065 26.3 10.0 81 191-277 27-110 (280)
421 1yde_A Retinal dehydrogenase/r 36.1 2.5E+02 0.0084 25.4 10.8 100 190-297 9-112 (270)
422 2h7i_A Enoyl-[acyl-carrier-pro 36.0 1.5E+02 0.005 26.9 9.1 100 191-297 8-121 (269)
423 1yo6_A Putative carbonyl reduc 35.9 2.2E+02 0.0076 24.9 10.2 100 192-297 5-111 (250)
424 2yv1_A Succinyl-COA ligase [AD 35.8 48 0.0016 31.2 5.6 74 223-312 57-130 (294)
425 3un1_A Probable oxidoreductase 35.7 1.1E+02 0.0039 27.6 8.2 95 190-297 28-125 (260)
426 3bk2_A RNAse J, metal dependen 35.0 1.2E+02 0.0042 31.3 9.1 79 213-304 337-423 (562)
427 1vhx_A Putative holliday junct 35.0 61 0.0021 27.0 5.5 60 250-314 40-102 (150)
428 1iv0_A Hypothetical protein; r 34.9 62 0.0021 24.8 5.1 58 251-313 37-96 (98)
429 3eb2_A Putative dihydrodipicol 34.8 1.7E+02 0.0057 27.5 9.3 88 193-310 76-166 (300)
430 4fhz_A Phospholipase/carboxyle 34.4 2.8E+02 0.0095 25.5 13.2 111 183-302 151-265 (285)
431 1tqj_A Ribulose-phosphate 3-ep 33.7 2.1E+02 0.0073 25.4 9.5 19 291-309 159-179 (230)
432 1xu9_A Corticosteroid 11-beta- 33.5 2.6E+02 0.009 25.4 10.5 101 191-297 29-135 (286)
433 4da9_A Short-chain dehydrogena 33.4 1E+02 0.0035 28.3 7.6 100 191-296 30-137 (280)
434 3a5f_A Dihydrodipicolinate syn 33.0 91 0.0031 29.1 7.1 95 173-297 56-153 (291)
435 3tsm_A IGPS, indole-3-glycerol 32.8 1.3E+02 0.0043 27.9 7.8 50 249-310 127-176 (272)
436 3vtz_A Glucose 1-dehydrogenase 31.9 2E+02 0.0067 26.1 9.2 94 190-297 14-110 (269)
437 3ozo_A N-acetylglucosaminidase 31.7 59 0.002 33.8 5.9 64 230-308 211-274 (572)
438 3dhu_A Alpha-amylase; structur 31.7 68 0.0023 32.1 6.3 28 288-315 82-109 (449)
439 4gqr_A Pancreatic alpha-amylas 31.6 30 0.001 34.9 3.7 28 288-315 75-102 (496)
440 2nly_A BH1492 protein, diverge 31.5 1.3E+02 0.0045 27.3 7.6 54 251-310 79-134 (245)
441 1c7s_A Beta-N-acetylhexosamini 30.9 35 0.0012 37.3 4.2 119 185-308 263-418 (858)
442 3oig_A Enoyl-[acyl-carrier-pro 30.9 1.5E+02 0.005 26.8 8.1 102 189-297 6-120 (266)
443 3zq4_A Ribonuclease J 1, RNAse 30.5 1.4E+02 0.0046 31.0 8.5 95 193-304 294-408 (555)
444 1ofu_X SULA, hypothetical prot 30.4 2E+02 0.0069 22.7 10.5 80 214-307 32-114 (119)
445 1vb5_A Translation initiation 30.3 2.6E+02 0.0089 25.8 9.7 118 170-308 93-216 (276)
446 3zs7_A Pyridoxal kinase; trans 30.2 2.8E+02 0.0095 25.8 10.1 55 252-313 56-121 (300)
447 1hjs_A Beta-1,4-galactanase; 4 30.0 91 0.0031 29.8 6.6 38 279-316 49-86 (332)
448 1oi7_A Succinyl-COA synthetase 29.9 77 0.0026 29.6 5.9 75 223-313 51-125 (288)
449 3mwd_B ATP-citrate synthase; A 29.8 75 0.0026 30.5 5.9 77 222-313 64-141 (334)
450 1f6k_A N-acetylneuraminate lya 29.6 89 0.003 29.3 6.4 78 193-297 76-156 (293)
451 2yl5_A Beta-N-acetylhexosamini 29.6 39 0.0013 34.0 4.0 28 281-308 86-113 (442)
452 4h15_A Short chain alcohol deh 29.4 2.1E+02 0.0072 26.0 8.9 97 188-298 9-110 (261)
453 3dmy_A Protein FDRA; predicted 29.4 67 0.0023 32.6 5.7 74 221-311 20-94 (480)
454 1i4n_A Indole-3-glycerol phosp 29.3 46 0.0016 30.5 4.1 49 249-309 108-156 (251)
455 1now_A Beta-hexosaminidase bet 29.0 80 0.0027 32.3 6.3 108 186-308 102-238 (507)
456 2nwq_A Probable short-chain de 28.9 1.5E+02 0.0052 27.0 7.9 100 191-297 22-127 (272)
457 3sho_A Transcriptional regulat 28.6 1.4E+02 0.0046 25.3 7.0 22 291-312 102-125 (187)
458 3og9_A Protein YAHD A copper i 28.4 2.7E+02 0.0091 23.5 9.1 107 188-302 99-208 (209)
459 3h5d_A DHDPS, dihydrodipicolin 28.1 1.4E+02 0.0047 28.3 7.4 90 192-311 78-171 (311)
460 3si9_A DHDPS, dihydrodipicolin 28.0 1.5E+02 0.0052 28.0 7.7 88 192-309 93-184 (315)
461 3dqp_A Oxidoreductase YLBE; al 27.9 95 0.0033 27.0 6.1 67 193-277 3-70 (219)
462 1bqc_A Protein (beta-mannanase 27.7 1.4E+02 0.0047 27.7 7.5 19 228-246 37-55 (302)
463 2fp4_A Succinyl-COA ligase [GD 27.6 68 0.0023 30.3 5.2 76 223-314 58-134 (305)
464 2fwm_X 2,3-dihydro-2,3-dihydro 27.5 3.2E+02 0.011 24.2 10.1 93 191-297 8-103 (250)
465 2ya0_A Putative alkaline amylo 27.5 39 0.0013 36.4 3.8 28 288-315 253-280 (714)
466 2qv5_A AGR_C_5032P, uncharacte 27.2 1.4E+02 0.0048 27.4 7.0 77 228-310 71-161 (261)
467 2yl6_A Beta-N-acetylhexosamini 27.0 39 0.0013 33.9 3.5 28 281-308 83-110 (434)
468 3mje_A AMPHB; rossmann fold, o 27.0 3.1E+02 0.011 27.7 10.3 98 192-297 240-349 (496)
469 1y80_A Predicted cobalamin bin 26.7 2.7E+02 0.0093 24.1 8.8 64 229-308 109-176 (210)
470 3l21_A DHDPS, dihydrodipicolin 26.6 3.5E+02 0.012 25.2 10.0 57 249-308 30-89 (304)
471 2pju_A Propionate catabolism o 26.6 3.4E+02 0.012 24.1 10.3 75 193-280 41-116 (225)
472 2pd4_A Enoyl-[acyl-carrier-pro 26.1 3.6E+02 0.012 24.2 11.5 99 191-297 7-117 (275)
473 3pzs_A PM kinase, pyridoxamine 25.9 2.8E+02 0.0097 25.4 9.2 54 252-312 57-117 (289)
474 1jr2_A Uroporphyrinogen-III sy 25.9 77 0.0026 29.4 5.2 92 194-301 137-231 (286)
475 3ctl_A D-allulose-6-phosphate 25.6 3.6E+02 0.012 24.0 11.8 21 289-309 151-173 (231)
476 3ecs_A Translation initiation 25.5 1.7E+02 0.0058 27.7 7.4 115 172-308 107-228 (315)
477 3cpr_A Dihydrodipicolinate syn 25.4 4.1E+02 0.014 24.7 10.3 57 249-308 31-90 (304)
478 1g94_A Alpha-amylase; beta-alp 25.4 43 0.0015 33.6 3.5 29 288-316 63-91 (448)
479 1qsg_A Enoyl-[acyl-carrier-pro 25.3 3.7E+02 0.012 24.0 10.7 81 191-279 10-95 (265)
480 3twe_A Alpha4H; unknown functi 25.3 88 0.003 16.9 3.2 18 413-430 8-25 (27)
481 1e7w_A Pteridine reductase; di 25.2 2.5E+02 0.0084 25.8 8.7 55 191-246 10-69 (291)
482 2lqh_B Forkhead box O3, FOXO3A 31.1 15 0.00052 23.0 0.0 25 7-31 1-25 (52)
483 2p91_A Enoyl-[acyl-carrier-pro 25.1 3.9E+02 0.013 24.2 10.1 98 192-297 23-132 (285)
484 3qze_A DHDPS, dihydrodipicolin 25.1 1.5E+02 0.005 28.1 7.0 75 196-297 101-175 (314)
485 3qfe_A Putative dihydrodipicol 25.0 2.9E+02 0.01 26.0 9.2 91 192-309 82-176 (318)
486 3ruf_A WBGU; rossmann fold, UD 24.7 2.1E+02 0.0071 26.9 8.3 102 190-304 25-143 (351)
487 1lwj_A 4-alpha-glucanotransfer 24.5 54 0.0019 32.7 4.0 29 288-316 68-96 (441)
488 1ht6_A AMY1, alpha-amylase iso 24.4 56 0.0019 32.2 4.1 29 288-316 67-95 (405)
489 1sny_A Sniffer CG10964-PA; alp 24.4 3.7E+02 0.013 23.8 9.8 66 191-262 22-92 (267)
490 3bzy_B ESCU; auto cleavage pro 23.9 45 0.0015 24.8 2.4 23 291-313 28-50 (83)
491 4eue_A Putative reductase CA_C 23.8 5.3E+02 0.018 25.3 15.5 84 190-279 59-159 (418)
492 3kux_A Putative oxidoreductase 23.7 1.6E+02 0.0053 28.1 7.1 71 224-310 55-125 (352)
493 3mfq_A TROA, high-affinity zin 23.6 4.3E+02 0.015 24.2 10.0 78 216-307 164-242 (282)
494 2yxb_A Coenzyme B12-dependent 23.4 2.2E+02 0.0074 23.8 7.1 59 229-303 39-97 (161)
495 2hfn_A Synechocystis photorece 23.4 1.6E+02 0.0054 24.6 6.1 97 271-379 7-116 (153)
496 2qhx_A Pteridine reductase 1; 23.4 2.7E+02 0.0093 26.1 8.7 55 191-246 47-106 (328)
497 3sc6_A DTDP-4-dehydrorhamnose 23.3 2.2E+02 0.0077 25.7 8.0 87 192-307 7-102 (287)
498 2wyu_A Enoyl-[acyl carrier pro 23.1 3.4E+02 0.012 24.2 9.1 99 191-297 9-119 (261)
499 2nm0_A Probable 3-oxacyl-(acyl 23.1 1.9E+02 0.0065 26.0 7.2 73 191-277 22-94 (253)
500 1xp8_A RECA protein, recombina 22.9 3.3E+02 0.011 26.2 9.3 17 478-494 292-308 (366)
No 1
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=6.9e-64 Score=531.34 Aligned_cols=480 Identities=79% Similarity=1.278 Sum_probs=427.6
Q ss_pred CcccccCcCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCc
Q 009517 54 PAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDR 133 (533)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~ 133 (533)
+.+++..+|+++.+..|...+++..++++++++...++..+|+..+|++++|+|...+++|.+++++++..+.+|.+++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~ 100 (500)
T 3tcm_A 21 ATVAVDNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQR 100 (500)
T ss_dssp CCCCGGGSCHHHHHCCCGGGSHHHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGC
T ss_pred ccCCHHHhCHHHHhhhhHhcCHHHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccC
Confidence 45677889999999999999999999999999876677677999999999999999999999999999999999999888
Q ss_pred ccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC
Q 009517 134 SETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 134 ~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 213 (533)
+.++..+|.++++++.+.+....+.....|++..|..+||+++++++.+++|.++++++|++|+|+++++..+++.++.+
T Consensus 101 ~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 180 (500)
T 3tcm_A 101 EEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRN 180 (500)
T ss_dssp TTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCS
T ss_pred CCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCC
Confidence 77666789999999988887754323678999999999999999999999998899999999999999999999998635
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHH
Q 009517 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~ 293 (533)
+||+|+++.|+|+.|...+...|++++.++++++++|++|+++|+++|++....+.++++|++++||||||.++|.++|+
T Consensus 181 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~ 260 (500)
T 3tcm_A 181 EKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQY 260 (500)
T ss_dssp TTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHH
Confidence 89999999999999999999999999999999888999999999999998766666899999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|+++|++||+++|+||+|+++.|+++.++.++..+..+++....++++|+++||||+|+|++|+|+||+++.+.+++++
T Consensus 261 ~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 340 (500)
T 3tcm_A 261 DIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR 340 (500)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHH
T ss_pred HHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHH
Confidence 99999999999999999999999976556778877766653212345689999999998678999999999755588899
Q ss_pred HHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 374 EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 374 ~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
+.+.+..+..++++.++|.++..+|+.++.++..|+.|.++++.++++++++++.+.+.|+++||+.+..|+|+||+|++
T Consensus 341 ~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~ 420 (500)
T 3tcm_A 341 EQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQ 420 (500)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCE
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeee
Confidence 99988777778999999999999999876667888889999999999999999999999999999999999999999998
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHHhcC
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFRN 533 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~~~~ 533 (533)
+.+|.+..+..+..+..++..++.++|+++||+++||+.|+...+.++|||+++.++++|++++++|++++++++++|+|
T Consensus 421 ~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~~~~ 500 (500)
T 3tcm_A 421 ICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEYRD 500 (500)
T ss_dssp ECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHHHCC
T ss_pred ecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88887765555555666677777888999999999999998656777999999988999999999999999999999986
No 2
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.3e-63 Score=522.69 Aligned_cols=472 Identities=48% Similarity=0.862 Sum_probs=398.5
Q ss_pred CcccccCcCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCc
Q 009517 54 PAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDR 133 (533)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~ 133 (533)
+.+++..+|+++.++.|..++++..+|.+++++++.|.. .||+.+|++++|+|...|++|.+|+++++.++.+|.+++
T Consensus 21 ~~~~~~~~~~~~~~~~y~~rg~~~~~a~~~~~~~~~g~~-~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~- 98 (498)
T 3ihj_A 21 QSMTLESMNPQVKAVEYAVRGPIVLKAGEIELELQRGIK-KPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLD- 98 (498)
T ss_dssp EEEEEEEETTEEEEEEEEECCHHHHHHHHHHHHHHTTCC-CSSSSCBCCC----------CCHHHHHHHHHHHCGGGGG-
T ss_pred ccCCHHHHHHHHHHhhhhhcCHHHHHHHHHHHHHhccCC-CchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccC-
Confidence 456778899999999999999999999999999988776 499999999999999999999999999999999998876
Q ss_pred ccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhc-CCCCCCCCEEEcCChHHHHHHHHHHhcc
Q 009517 134 SETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLLIR 212 (533)
Q Consensus 134 ~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~-g~~~~~~~i~~t~G~~~al~~~~~~l~~ 212 (533)
+..+|.++++++.+.+.+..+.....|++..|..+||+++++++.+++ |+++++++|++|+|+++++..++++++
T Consensus 99 ---~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~- 174 (498)
T 3ihj_A 99 ---SPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV- 174 (498)
T ss_dssp ---CSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-
T ss_pred ---cccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-
Confidence 445799999999888876432235789999999999999999999888 488899999999999999999999998
Q ss_pred CCCC----eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 213 SEND----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 213 ~~gd----~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
++|| +|+++.|+|+.|...+...|++++.++++++++|++|+++|++++++... +.++++|++++||||||.++|
T Consensus 175 ~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s 253 (498)
T 3ihj_A 175 SGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQS 253 (498)
T ss_dssp CCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCC
T ss_pred CCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCC
Confidence 7765 99999999999999999999999999999888999999999999987422 125899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC-CCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG-EKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
.+++++|+++|++||++||+||+|..+.|++..++.++..+..++... ..++++|+++||||+|+|++|+|+||+++.+
T Consensus 254 ~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~ 333 (498)
T 3ihj_A 254 RKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVIN 333 (498)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEES
T ss_pred HHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEec
Confidence 999999999999999999999999999997654677877765544210 0245689999999998678999999998444
Q ss_pred CCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCce
Q 009517 368 FSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGA 447 (533)
Q Consensus 368 ~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg 447 (533)
.++++++.+.+.....++++.++|.++..+++.++.++..|+.|.++.+.++++++++++++.+.|+++||+.+.+|+|+
T Consensus 334 ~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg 413 (498)
T 3ihj_A 334 LHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGA 413 (498)
T ss_dssp CCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBS
T ss_pred CCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeE
Confidence 48999999988877778899999999999999877777889999888899999999999999999999999999999999
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
||+|+++.+|..........+.+.++.++.++|+++||++.||+.|+...+.++|||+++.++++|++++++|+++++++
T Consensus 414 ~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 414 MYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp SEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 99999988887765555556666666667888999999999999998656677999999988999999999999999999
Q ss_pred HHHhc
Q 009517 528 MDKFR 532 (533)
Q Consensus 528 ~~~~~ 532 (533)
+++|+
T Consensus 494 ~~~~~ 498 (498)
T 3ihj_A 494 LEKYA 498 (498)
T ss_dssp HHHC-
T ss_pred HHHhC
Confidence 99885
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=3.2e-51 Score=420.55 Aligned_cols=379 Identities=22% Similarity=0.340 Sum_probs=316.5
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++...+++++..+..++.+....+++ +|+|+.|.|+. +.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~------- 45 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRRQGVD---------LVALTAGEPDF----------------------DT------- 45 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHHTTCC---------CEECCCSSCSS----------------------CC-------
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHhcCCC---------EEEecCCCCCC----------------------CC-------
Confidence 46677778888887788888777665555 99999999874 22
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+.+.. ....|++..|..+||++++++++..+|.++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 46 ~~~v~~a~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vlv 120 (385)
T 1b5p_A 46 PEHVKEAARRALAQ----GKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIV 120 (385)
T ss_dssp CHHHHHHHHHHHHT----TCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhc-CCCCEEEE
Confidence 67888888888765 24579998899999999999999988988889999999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+.|...++..|++++.++++++++|.+|+++|++++++ ++++|++++||||||.++|.+++++|+++|+
T Consensus 121 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~ 194 (385)
T 1b5p_A 121 LSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAV 194 (385)
T ss_dssp EESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC------CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999998656789999999998875 7999999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||++||+||+|.++.+++ +..++..+ .+ .++|++.||||.+ |++|+|+||+++ ++++++.+.+..
T Consensus 195 ~~~~~li~De~~~~~~~~~--~~~~~~~~-------~~-~~~i~~~s~SK~~-~~~G~RiG~~~~---~~~~~~~l~~~~ 260 (385)
T 1b5p_A 195 EHDFYLVSDEIYEHLLYEG--EHFSPGRV-------AP-EHTLTVNGAAKAF-AMTGWRIGYACG---PKEVIKAMASVS 260 (385)
T ss_dssp HTTCEEEEECTTTTCBSSS--CCCCGGGT-------CT-TTEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEEccchhcccCC--CCCCHHHc-------CC-CCEEEEEechhhc-CCcccceEEEEe---CHHHHHHHHHHH
Confidence 9999999999999988865 33444333 23 4689999999999 899999999998 899999988776
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .+++++.++|.++..+|+.. +...+++++++++++++++.+.+.|+++ |+.+..|++++|+|++++..
T Consensus 261 ~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-- 330 (385)
T 1b5p_A 261 RQSTTSPDTIAQWATLEALTNQ-------EASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPI-- 330 (385)
T ss_dssp HTTTCSCCHHHHHHHHHHHHCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSBTTEEEEECTTT--
T ss_pred hhccCCCCHHHHHHHHHHHhCC-------CcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecCCC--
Confidence 5 56788999999988887420 0012456778899999999999999998 99999999999999766410
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+. +...++..++ ++||.+.||..|+. . ++||||++.++++|++++++|+++++
T Consensus 331 --------~~-~~~~l~~~l~-~~gv~v~~g~~f~~-~--~~iRis~~~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 331 --------AP-DEVRAAERLL-EAGVAVVPGTDFAA-F--GHVRLSYATSEENLRKALERFARVLG 383 (385)
T ss_dssp --------CS-SHHHHHHHHH-HTTEECEESGGGTC-T--TEEEEECCSCHHHHHHHHHHGGGGC-
T ss_pred --------CC-CHHHHHHHHH-HCCeEEecccccCC-C--CeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 11 2445555555 78999999999974 3 49999999888899999999987764
No 4
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=3.9e-51 Score=420.71 Aligned_cols=388 Identities=18% Similarity=0.179 Sum_probs=297.6
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
.+++.+++.+|.++|++++++++++..+ +|||++|.+...+++|+ +.
T Consensus 18 ~~~~~~v~~~p~d~i~~l~~~~~~d~~~---------kinLgvG~y~d~~g~~~------------------------vl 64 (420)
T 4h51_A 18 AERWQKIQAQAPDVIFDLAKRAAAAKGP---------KANLVIGAYRDEQGRPY------------------------PL 64 (420)
T ss_dssp HHHHHTCCCCCCCHHHHHHHHHHHCCSS---------CEECCSCCCBCTTSCBC------------------------CC
T ss_pred hHHHhCCCCCCCChHHHHHHHHhcCCCC---------CEEeecCcccCCCCCCC------------------------CC
Confidence 4578889999999999999998875443 89999999887555553 02
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHhcc---CCCC
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR---SEND 216 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~~---~~gd 216 (533)
+.|.++....+.. . ..+.|.|..|+++||+++++++.+. ....+++ +.|.|++.|+..++..+.. +|||
T Consensus 65 ~~Vk~A~~~~~~~-~--~~~~Y~p~~G~p~lr~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd 138 (420)
T 4h51_A 65 RVVRKAEQLLLDM-N--LDYEYLPISGYQPFIDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETT 138 (420)
T ss_dssp HHHHHHHHHHHHT-T--CCCCCCCTTCCHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTS
T ss_pred HHHHHHHHHHhcC-C--CCCCCCCcCChHHHHHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCC
Confidence 4444444444443 2 2567999999999999999998532 2333443 5588898888777665531 5899
Q ss_pred eEEEcCCcCcchHHHHHHhCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~-~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
+|++++|+|++|..+++.+|++ +..+++.+..++++|++.+.+.++.. .++++++++++||||||.+++.++|++|
T Consensus 139 ~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~vll~~~p~NPtG~~~~~~~~~~i 215 (420)
T 4h51_A 139 PIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAA---PDGSVFILHQCAHNPTGVDPSQEQWNEI 215 (420)
T ss_dssp CEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHS---CSSCEEEEESSSCTTTCCCCCHHHHHHH
T ss_pred EEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhcc---CCCcEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999987 55677776678899999999998764 3467777888999999999999999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH--
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR-- 373 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~-- 373 (533)
+++|+++++++|+||+|++|.|++.. ..++ ...... +...++|+++||||+| +|+|||+||+++.+...+..
T Consensus 216 ~~~~~~~~~~~~~D~~Y~~~~~~~~~-~~~~-~~~~~~---~~~~~~i~~~s~SK~~-~~~G~RvG~~~~~~~~~~~~~~ 289 (420)
T 4h51_A 216 ASLMLAKHHQVFFDSAYQGYASGSLD-TDAY-AARLFA---RRGIEVLLAQSFSKNM-GLYSERAGTLSLLLKDKTKRAD 289 (420)
T ss_dssp HHHHHHHTCEEEEEESCTTTTTSCHH-HHTH-HHHHHH---HTTCCCEEEEECTTTS-CCGGGCEEEEEEECSCHHHHHH
T ss_pred HHHHHhcCceEeeehhhhhhccCCcc-cchH-HHHhHH---hhCceEEEEecccccc-ccccCceEEEEecccCHHHHHH
Confidence 99999999999999999999886421 1111 111111 1334689999999999 89999999999854444333
Q ss_pred --HHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceEecCCce
Q 009517 374 --EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL--EG-ITCNKAEGA 447 (533)
Q Consensus 374 --~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~gg 447 (533)
.++..... ..++++..+|.++..+|+++ .....|.++++.++++|+++|+.|.+.|+++ ++ |.++.+++|
T Consensus 290 ~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~----~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~G 365 (420)
T 4h51_A 290 VKSVMDSLIREEYTCPPAHGARLAHLILSNN----ELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIG 365 (420)
T ss_dssp HHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCS
T ss_pred HHHHHHHhhhcccCcchHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCc
Confidence 33333333 67889999999999999864 3677888999999999999999999999987 22 677889999
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~ 526 (533)
||.|++++ .++ + ++|+++||+++|| | |||++ +++++|++++++|++++++
T Consensus 366 mF~~~gls----------------~e~-v-~~L~e~~Vy~~~~-------g----Ris~Agl~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 366 MFSFLGLS----------------KAQ-C-EYCQNHNIFITVS-------G----RANMAGLTHETALMLAQTINDAVRN 416 (420)
T ss_dssp SEEECCCC----------------HHH-H-HHHHHTTEECCTT-------C----EEEGGGCCHHHHHHHHHHHHHHHC-
T ss_pred eEEecCcC----------------HHH-H-HHHHhCCEEEcCC-------C----EEEeccCCHHHHHHHHHHHHHHHHH
Confidence 99997654 222 3 4678899999873 2 99997 8999999999999999998
Q ss_pred HHHH
Q 009517 527 FMDK 530 (533)
Q Consensus 527 ~~~~ 530 (533)
+.++
T Consensus 417 i~re 420 (420)
T 4h51_A 417 VNRE 420 (420)
T ss_dssp ----
T ss_pred hhcC
Confidence 8764
No 5
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.8e-50 Score=415.78 Aligned_cols=379 Identities=12% Similarity=0.130 Sum_probs=290.5
Q ss_pred cCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHH
Q 009517 67 KCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIE 146 (533)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~ 146 (533)
.++..+..+++.....++.... +++|||++|.|...+.++ ..++.+.+
T Consensus 7 ~~~~~~~~~i~~~~~~~~~~~~--------~~~I~l~~G~~~d~~~~~------------------------~~~~~v~~ 54 (405)
T 3k7y_A 7 SLENIEVDNILKTAREFKEDTC--------EEKINLSIGVCCNDDGDL------------------------HIFDSVLN 54 (405)
T ss_dssp GCCCCCCCHHHHHHHHHTTSSC--------SSCEECSCSSCBCTTSSB------------------------CCCHHHHH
T ss_pred cCCCCCCChHHHHHHHHhcCCC--------cCcEEeeeeeeECCCCCC------------------------cccHHHHH
Confidence 3444444456666666654221 249999999864311111 11455555
Q ss_pred HHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCC--EEEcCChHHHHHHHHHHhccC--CCCeEEEcC
Q 009517 147 RAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND--IFLTDGASPAVHMMMQLLIRS--ENDGILCPI 222 (533)
Q Consensus 147 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~--i~~t~G~~~al~~~~~~l~~~--~gd~Vlv~~ 222 (533)
++. .+.+.. ..++|++..|.++||+++++++.++++..+++++ |++|+|+++|+.++++.+. . + |+|++++
T Consensus 55 a~~-~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~-~~~~-d~Vlv~~ 129 (405)
T 3k7y_A 55 ADK-LVTENY--KEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLK-MLNV-ETLYVTN 129 (405)
T ss_dssp HHH-HHHHHC--CCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHH-TTTC-CEEEEES
T ss_pred HHH-HhcCCC--CCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHH-hcCC-CEEEEeC
Confidence 554 331211 3678999999999999999999877776677775 5999999999999999987 6 8 9999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC-CCCCccCCCHHHHHHHHHHHHH
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKK 301 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p-~NPtG~~~s~~~l~~i~~l~~~ 301 (533)
|+|++|..+++.+|++++.+|+.++++|++|+++|++++++. +++++|++++| |||||.+++.+++++|+++|++
T Consensus 130 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~ 205 (405)
T 3k7y_A 130 PPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI----PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLH 205 (405)
T ss_dssp SCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS----CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC----CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999855557899999999999862 24678888765 9999999999999999999999
Q ss_pred cCCEEEEccccccccccCCC-CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH---
Q 009517 302 EGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY--- 377 (533)
Q Consensus 302 ~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~--- 377 (533)
||++||+||+|.+|.|++.. ...++..+.. ...++|+++||||+| +|+|||+||+++...++++++.+.
T Consensus 206 ~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~-~l~GlRiG~~~~~~~~~~~~~~~~~~l 278 (405)
T 3k7y_A 206 KKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE------KNIAFSVCQSFSKNM-SLYGERAGALHIVCKNQEEKKIVFNNL 278 (405)
T ss_dssp HCCEEEEEESCTTTSSSSTTGGGHHHHHHHT------TTCCEEEEEECTTTS-CCTTTTEEEEEEECSSHHHHHHHHHHH
T ss_pred CCeEEEEecCcccccCCCcccchHHHHHHHh------cCCcEEEEeeCCccC-CCccccceEEEEEeCCHHHHHHHHHHH
Confidence 99999999999999885321 1223333221 234689999999999 899999999976445777665543
Q ss_pred -Hhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCC---CceEecCCcee
Q 009517 378 -KVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN----SLE---GITCNKAEGAM 448 (533)
Q Consensus 378 -~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~---g~~~~~~~gg~ 448 (533)
.... ..++++.++|.++..+|+++ ...+.|.++++.++++|+++|+.+.+.|+ ++. +|.+.+|+|||
T Consensus 279 ~~~~~~~~~~~~~~~q~~~~~~l~~~----~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~ 354 (405)
T 3k7y_A 279 CFIVRKFYSSPVIHTNRILCQLLNNQ----NLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGL 354 (405)
T ss_dssp HHHHHTTTSSCCHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSS
T ss_pred HHHHhcccCCCcHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceE
Confidence 3333 44567889999998888642 13345778889999999999999999999 771 27889999999
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~ 526 (533)
|+|++++ . .++.++ +++||++.|| + |||++ .++++|++++++|+++++.
T Consensus 355 f~~~~l~--~---------------~~~~~L-~~~gV~v~p~-------~----Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 355 FSFVPLL--A---------------KIAEHL-KTHHIYIINN-------G----RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp EEECGGG--G---------------GGTTTT-TTTTEECCTT-------S----EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred EEecCCC--H---------------HHHHHH-HHCCEeecCC-------C----eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 9997654 1 123455 8899999984 2 99997 8999999999999998763
No 6
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=9.1e-50 Score=415.36 Aligned_cols=367 Identities=22% Similarity=0.365 Sum_probs=305.6
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|++|.|+..|..+ .|+.+++++.+.+... ....|.+..|..+||++++
T Consensus 55 ~~i~l~~g~~~~~g~~~-------------------------~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~la 106 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLP-------------------------TDPEVTQAMKDALDSG---KYNGYAPSIGFLSSREEIA 106 (427)
T ss_dssp CCEECCCSCTTTTSSSC-------------------------CCHHHHHHHHHHHHHC---CSSSCCCTTCCHHHHHHHH
T ss_pred CEEeCCCcCCCccCCCC-------------------------CCHHHHHHHHHHHhcC---cCCCCCCCCCcHHHHHHHH
Confidence 38999999987432212 2788999998888763 2468999999999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
+++.+. +.++++++|++|+|+++|+..+++.++ ++||+|+++.|+|.+|...++..|.+++.++++++.+|++|+++|
T Consensus 107 ~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 184 (427)
T 3dyd_A 107 SYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLA-NPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQL 184 (427)
T ss_dssp HHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHH
T ss_pred HHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 999876 777889999999999999999999998 899999999999999999999999999999998777889999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++ ++++|++++||||||.+++.++|++|+++|+++|+++|+||+|++|.+++. .+.++..+ .
T Consensus 185 ~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~-~~~~~~~~-------~ 250 (427)
T 3dyd_A 185 EYLIDE------KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC-KYEPLATL-------S 250 (427)
T ss_dssp HSSCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC-CCCCGGGG-------C
T ss_pred HHHhcc------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC-cCccHHHh-------C
Confidence 999876 799999999999999999999999999999999999999999999998663 34444333 3
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCC----HHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFS----AEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~----~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
.+..+|+++||||+| +++|+|+||+++.... +++++.+......++++++++|.++..+|+... .+
T Consensus 251 ~~~~vi~~~S~sK~~-~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~---------~~ 320 (427)
T 3dyd_A 251 TDVPILSCGGLAKRW-LVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP---------GE 320 (427)
T ss_dssp SSCCEEEEEESTTTS-SCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC---------HH
T ss_pred CCCcEEEEeeccccC-CCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC---------HH
Confidence 455689999999998 7899999999983100 578888877655568899999999999885321 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC
Q 009517 414 ERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
++++++++++++++.+.+.|+++||+.++.|++++|+|++++... ..+..+...++.++++++||++.||..|
T Consensus 321 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~-------~~~~~~~~~~~~~l~~~~gV~v~~g~~~ 393 (427)
T 3dyd_A 321 FYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEH-------FPEFENDVEFTERLVAEQSVHCLPATCF 393 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGG-------CTTCSSHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhh-------cCCCCCHHHHHHHHHHHCCEEEECCccc
Confidence 467788889999999999999999999999999999997765110 0001234566777777899999999998
Q ss_pred CCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 494 ~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+. . +++||+++.++++|++++++|+++++++.
T Consensus 394 ~~-~--~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 394 EY-P--NFIRVVITVPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp TC-T--TEEEEESCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CC-C--CeEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence 73 3 39999999899999999999999988754
No 7
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=3.5e-48 Score=398.11 Aligned_cols=384 Identities=23% Similarity=0.370 Sum_probs=319.2
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++...+++++..+..++++....|++ +|||+.|.|.. +.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~~~~~~----------------------~~------- 44 (388)
T 1j32_A 3 LAARVESVSPSMTLIIDAKAKAMKAEGID---------VCSFSAGEPDF----------------------NT------- 44 (388)
T ss_dssp CCHHHHTSCCCSSTTTHHHHHHHHTTTCC---------CEECCCSSCSS----------------------CC-------
T ss_pred hhhHhHhCCccHHHHHHHHHHHHHhcCCC---------EEECCCCCCCC----------------------CC-------
Confidence 35567778888888888888887765555 99999999864 21
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+.+.. ....|++..|..+||+++++++.+.+|.++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 45 ~~~v~~a~~~~~~~----~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~ 119 (388)
T 1j32_A 45 PKHIVEAAKAALEQ----GKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMI-EPGDEVII 119 (388)
T ss_dssp CHHHHHHHHHHHHT----TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEE
Confidence 68888888888865 24579998899999999999999888988889999999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+++...++..|.+++.++.+++.+|.+|+++|++++++ ++++|++++|+||||.++|.+++++|+++|+
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~ 193 (388)
T 1j32_A 120 PAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP------KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAV 193 (388)
T ss_dssp ESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999987655788999999999976 7999999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|.++.+++. +..++..+..+. ...++++.||||.+ |++|+|+||+++ ++++++.+....
T Consensus 194 ~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~ 263 (388)
T 1j32_A 194 EAGLWVLSDEIYEKILYDDA-QHLSIGAASPEA-----YERSVVCSGFAKTY-AMTGWRVGFLAG---PVPLVKAATKIQ 263 (388)
T ss_dssp HHTCEEEEECTTTTCBCTTC-CCCCGGGSCHHH-----HHTEEEEEESTTTT-TCTTTCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEEccchhcccCCC-CCCCHHHccccc-----cCCEEEEeechhcc-CCcccceEEEEe---CHHHHHHHHHHH
Confidence 99999999999999988653 333443331111 12468999999999 889999999998 899999888776
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .++++++++|.++..+|+... +++++++++++++++++.+.|++++|+.++.+.+++++|++++..
T Consensus 264 ~~~~~~~~~~~~~a~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-- 331 (388)
T 1j32_A 264 GHSTSNVCTFAQYGAIAAYENSQ----------DCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKT-- 331 (388)
T ss_dssp HTTTCSCCHHHHHHHHHHHHSCS----------HHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGG--
T ss_pred hhcccCCCHHHHHHHHHHHhCCc----------HHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCC--
Confidence 5 567889999998888875322 345678888999999999999998899998999999999765310
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+. +...++..+++++||.+.||..|+. + ++|||+++.++++|++++++|+++++++
T Consensus 332 --------~~-~~~~~~~~l~~~~gi~v~~g~~~~~-~--~~iRis~~~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 332 --------GR-SSLDFCSELLDQHQVATVPGAAFGA-D--DCIRLSYATDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp --------TC-CHHHHHHHHHHHHCEECEEGGGGTC-T--TBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred --------CC-CHHHHHHHHHHhCCEEEeChhhhCC-C--CcEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 11 2345555666668999999998873 3 3899999988999999999999988764
No 8
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=2.7e-48 Score=399.43 Aligned_cols=377 Identities=19% Similarity=0.280 Sum_probs=310.1
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++..++++++..++..++++..++++ +|||+.|.+.. +. |+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~g~~~~----------------------~~-------~~~ 48 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARRAEEAGRR---------IIHMEVGQPGT----------------------GA-------PRG 48 (391)
T ss_dssp STTCCCCCTTHHHHHHHHHHHHTTCC---------CEECCCSSCSS----------------------CS-------CHH
T ss_pred hHhhcCcchHHHHHHHHHHHHhcCCC---------eEEccCCCCCC----------------------CC-------CHH
Confidence 45667778888889999988887766 99999999874 22 688
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p 223 (533)
+++++.+++.+ ....|++..|..+||+++++++++.+|.++++++|++|+|+++|+..+++.++ ++||+|+++.|
T Consensus 49 v~~a~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~-~~gd~vl~~~p 123 (391)
T 3h14_A 49 AVEALAKSLET----DALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALF-DSGDRVGIGAP 123 (391)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEEES
T ss_pred HHHHHHHHHhc----CCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhc-CCCCEEEEcCC
Confidence 99998888875 25689999999999999999999999988999999999999999999999998 89999999999
Q ss_pred cCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 224 QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
+|+++...++..|.+++.++++++++|.+|+++++++ ++++|++++|+||||.+++.+++++|+++|++||
T Consensus 124 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 194 (391)
T 3h14_A 124 GYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQG 194 (391)
T ss_dssp CCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred CCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999998777789999998875 4789999999999999999999999999999999
Q ss_pred CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-c
Q 009517 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-V 382 (533)
Q Consensus 304 ~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~ 382 (533)
+++|+||+|.++.+++. ..++..+ ..++|++.||||.+ |++|+|+||+++ ++++++.+..... .
T Consensus 195 ~~li~De~~~~~~~~~~--~~~~~~~---------~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~ 259 (391)
T 3h14_A 195 ASFISDEIYHGIEYEAK--AVTALEL---------TDECYVINSFSKYF-SMTGWRVGWMVV---PEDQVRVVERIAQNM 259 (391)
T ss_dssp CEEEEECTTTTCBSSSC--CCCGGGT---------CSSSEEEEESSSTT-CCTTSCCEEEEC---CGGGHHHHHHHHHHT
T ss_pred CEEEEECcchhcccCCC--CcChhhc---------CCCEEEEEechhcc-CCccceeEEEEe---CHHHHHHHHHHHhhh
Confidence 99999999999988664 2232221 12468899999999 889999999998 8999999887765 6
Q ss_pred cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHH
Q 009517 383 NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIK 462 (533)
Q Consensus 383 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~ 462 (533)
++++++++|.++.++|+. .+++++++++++++++.+.+.|++++...+..+++++++|++++.+.
T Consensus 260 ~~~~~~~~~~a~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---- 324 (391)
T 3h14_A 260 FICAPHASQVAALAALDC-----------DAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLT---- 324 (391)
T ss_dssp TCCCCHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTC----
T ss_pred ccCCCHHHHHHHHHHhCC-----------hHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccC----
Confidence 678899999999888851 24567788889999999999999883344568899999997664211
Q ss_pred HHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 463 AAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 463 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.+...++..+++++||.+.||..|+...+.++|||+++.++++|++++++|++++++...
T Consensus 325 -------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~~~~ 384 (391)
T 3h14_A 325 -------DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQARGE 384 (391)
T ss_dssp -------SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHHC--
T ss_pred -------CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 134556667777779999999999853456699999998889999999999999987654
No 9
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=6.7e-48 Score=403.35 Aligned_cols=388 Identities=19% Similarity=0.311 Sum_probs=308.4
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
++++....+++++..++..+. .++ +|+|+.|.|+... . .
T Consensus 54 ~s~~~~~~~~s~~~~~~~~~~-----~~~---------~i~l~~g~p~~~~---------------------~------p 92 (448)
T 3aow_A 54 FSKKALEMRASEVRELLKLVE-----TSD---------IISLAGGLPNPKT---------------------F------P 92 (448)
T ss_dssp CCHHHHHCCCCHHHHHHHHHH-----TSS---------SEECCCCCCCGGG---------------------S------C
T ss_pred hhHHHhcCCCcHHHHHHHhcc-----CCC---------cEeCCCCCCCchh---------------------C------C
Confidence 455566666666555444321 223 9999999987310 0 1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++.+.+++.+.+.+... ....|++..|..+||+++++++.+.+|.+ ++++|++|+|+++++..++++++ ++||+|++
T Consensus 93 ~~~v~~a~~~~l~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~-~~Gd~Vlv 169 (448)
T 3aow_A 93 KEIIRDILVEIMEKYAD-KALQYGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFL-NPGDIVVV 169 (448)
T ss_dssp HHHHHHHHHHHHHHSHH-HHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHHHHhhhH-HHhCCCCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHc-CCCCEEEE
Confidence 46677777777765211 13679999999999999999998888876 78999999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-EeCCCCCCccCCCHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~ii-l~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
+.|+|+++...++..|++++.++++++ ++|+++|+++++.....+.++++|+ +++|+||||.+++.+++++|+++|
T Consensus 170 ~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la 246 (448)
T 3aow_A 170 EAPTYLAALQAFNFYEPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELA 246 (448)
T ss_dssp EESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHH
T ss_pred eCCChHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999754 5899999999972211123688885 569999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
++||++||+||+|.++.|++. ...++..+ +.++++|++.||||.+ + +|+|+||+++ ++++++.+...
T Consensus 247 ~~~~~~lI~De~y~~~~~~g~-~~~~~~~~-------~~~~~vi~~~S~SK~~-~-~GlriG~v~~---~~~l~~~l~~~ 313 (448)
T 3aow_A 247 SEYDFIVVEDDPYGELRYSGN-PEKKIKAL-------DNEGRVIYLGTFSKIL-A-PGFRIGWMVG---DPGIIRKMEIA 313 (448)
T ss_dssp HHHTCEEEEECSCTTCBCSSC-CCCCTGGG-------CTTSCEEEEEESTTTT-C-GGGCCEEEEE---CHHHHHHHHHH
T ss_pred HHcCCEEEEECCCccccCCCC-CCcCHHhc-------CCCCCEEEEccchhhc-c-ccccEEEEEe---CHHHHHHHHHH
Confidence 999999999999999998653 33444443 2344689999999999 7 8999999998 89999998876
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-CceEecCCceeEEecccCC
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LE-GITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~-g~~~~~~~gg~~~~~~~~~ 456 (533)
.. .++++++++|.++..+|+.. .+.++++++++.++++++.+.+.|++ +| |+.++.|.+|+|+|++++
T Consensus 314 ~~~~~~~~~~~~q~a~~~~L~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~- 384 (448)
T 3aow_A 314 KQSTDLCTNVFGQVVAWRYVDGG--------YLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLP- 384 (448)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHTT--------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECS-
T ss_pred HHHhcCCCCHHHHHHHHHHHHhC--------CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcC-
Confidence 65 56778999999999988642 13456788889999999999999987 57 699999999999997664
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-CCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-PGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.+ . +...++..+++ +||.+.||..|+.. .+.++|||+++ .++++|++++++|+++++++.+
T Consensus 385 -~~---------~-~~~~l~~~l~~-~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 385 -DG---------I-DSKKMLERAIK-KGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp -TT---------C-CHHHHHHHHHH-TTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred -CC---------C-CHHHHHHHHHH-CCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 1 24455556555 59999999999642 24569999998 5789999999999999987653
No 10
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=3.2e-48 Score=399.38 Aligned_cols=380 Identities=17% Similarity=0.245 Sum_probs=309.7
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..++++++..+.+....+. ..++ +++|||+.|.|.. +. |
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~--~~~g------~~~i~l~~~~~~~----------------------~~-------~ 45 (396)
T 3jtx_A 3 NTLLKQLKPYPFARLHEAMQGIS--APEG------MEAVPLHIGEPKH----------------------PT-------P 45 (396)
T ss_dssp HHHHHHCCSCHHHHHHHHTTTCC--CCTT------CCCEECSCCSCCS----------------------CC-------C
T ss_pred hhhhccCCCChHHHHHHHHHhhh--hccC------CCeEEeCCcCCCC----------------------CC-------C
Confidence 44566677777655555444332 1122 2399999999875 22 7
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHhccCCC----
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSEN---- 215 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~~~~g---- 215 (533)
+.+++++.+.+.. ...|++..|..+||+++++++.+.+|.+ ++++ +|++|+|+++++..+++.++ ++|
T Consensus 46 ~~v~~a~~~~~~~-----~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~-~~g~~~~ 119 (396)
T 3jtx_A 46 KVITDALTASLHE-----LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVL-NPVSDGI 119 (396)
T ss_dssp HHHHHHHHHTGGG-----GGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHC-CC---CC
T ss_pred HHHHHHHHHHhhh-----ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHh-CCCCccC
Confidence 8888888887753 6789999999999999999999989987 7788 99999999999999999998 786
Q ss_pred -CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 216 -DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 216 -d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
|+|+++.|+|+++...++..|++++.++++ +++|.+|+++|++++++ ++++|++++||||||.+++.+++++
T Consensus 120 ~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~g~~~d~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~ 192 (396)
T 3jtx_A 120 KPAIVSPNPFYQIYEGATLLGGGEIHFANCP-APSFNPDWRSISEEVWK------RTKLVFVCSPNNPSGSVLDLDGWKE 192 (396)
T ss_dssp CCEEEEEESCCHHHHHHHHHTTCEEEEEECC-TTTCCCCGGGSCHHHHH------TEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCcHhHHHHHHHcCCEEEEeecC-CCCCccCHHHHHHhhcc------CcEEEEEECCCCCCCCcCCHHHHHH
Confidence 799999999999999999999999999994 45788999999999987 7999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
|+++|++||+++|+||+|.++.+++. ...+.......+. ....+++++.||||++ +++|+|+||+++ ++++++
T Consensus 193 i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~ 265 (396)
T 3jtx_A 193 VFDLQDKYGFIIASDECYSEIYFDGN-KPLGCLQAAAQLG--RSRQKLLMFTSLSKRS-NVPGLRSGFVAG---DAELLK 265 (396)
T ss_dssp HHHHHHHHCCEEEEECTTTTCCSTTC-CCCCHHHHHHHTT--CCCTTEEEEEESTTTS-SCGGGCCEEEEE---CHHHHH
T ss_pred HHHHHHHcCCEEEEEccccccccCCC-CCchHHhhhhhcc--cccCcEEEEecccccc-CCcccceEEEEe---CHHHHH
Confidence 99999999999999999999988763 2334333222221 1134579999999998 789999999998 999999
Q ss_pred HHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 375 QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 375 ~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
.+..... .++++++++|.++..+|+.. +++++++++++++++.+.+.|+++ +.+..+++++|+|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----------~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~ 332 (396)
T 3jtx_A 266 NFLLYRTYHGSAMSIPVQRASIAAWDDE-----------QHVIDNRRLYQEKFERVIPILQQV--FDVKLPDASFYIWLK 332 (396)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHCC-----------HHHHHHHHHHHHHHHHHHHHHTTT--SCCCCCSSSSEEEEE
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHHHHHHHhc--CCccCCCeeEEEEEE
Confidence 9987765 56788999999998888531 456778888999999999999876 456788999999976
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-----CCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-----VPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
++. .+...++..+++++||.+.||..|+. ..+.++|||+++.++++|++++++|++++
T Consensus 333 ~~~-------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 333 VPD-------------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp CTT-------------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred CCC-------------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 651 12455666777888999999999974 23456999999888999999999998865
No 11
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.7e-48 Score=399.44 Aligned_cols=386 Identities=20% Similarity=0.302 Sum_probs=302.5
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..++.+++..+...+.++...|++ +|||+.|.|.. .. |
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~idl~~g~~~~----------------------~~-------~ 52 (412)
T 2x5d_A 11 FARIDRLPPYVFNITAELKMAARRRGED---------IIDLSMGNPDG----------------------PT-------P 52 (412)
T ss_dssp ----------CHHHHHHHHHHHHHTTCC---------CEECSSCCCCS----------------------CC-------C
T ss_pred hHHHhhcCchHHHHHHHHHHHHhhcCCC---------EEecCCCCCCC----------------------CC-------C
Confidence 4456666667666666666666665555 99999999764 21 6
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
+.+.+++.+++... ....|++..|..+||+++++++.+.+|.++++ ++|++|+|+++++..+++.++ ++||+|++
T Consensus 53 ~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~-~~gd~Vl~ 128 (412)
T 2x5d_A 53 PHIVEKLCTVAQRE---DTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATL-DHGDTILV 128 (412)
T ss_dssp HHHHHHHHHTC------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHHhCC---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhC-CCCCEEEE
Confidence 88888888777542 14579888899999999999999888877788 799999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|+++...++..|.+++.++++++.+|.+|++.|++++++ ++++|++++||||||.+++.+++++|+++|+
T Consensus 129 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 202 (412)
T 2x5d_A 129 PNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIP------KPRMMILGFPSNPTAQCVELDFFERVVALAK 202 (412)
T ss_dssp EESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEES------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhccc------CceEEEECCCCCCCCCcCCHHHHHHHHHHHH
Confidence 9999999999999999999999998655666899999988864 7899999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|.++.+++. ...++..+. .....++++.||||.+ |++|+|+||+++ ++++++.+....
T Consensus 203 ~~~~~li~De~~~~~~~~g~-~~~~~~~~~------~~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~ 271 (412)
T 2x5d_A 203 QYDVMVVHDLAYADIVYDGW-KAPSIMQVP------GAKDIAVEFFTLSKSY-NMAGWRIGFMVG---NPELVSALARIK 271 (412)
T ss_dssp HHTCEEEEECTTTTCBCTTC-CCCCGGGST------TGGGTEEEEEECC-CC-SCTTSCCEEEEE---CHHHHHHHHHHH
T ss_pred HcCCEEEEeccccccccCCC-CCCChhhcc------CccCcEEEEecCcccc-CCcccceEEEEc---CHHHHHHHHHHH
Confidence 99999999999999988653 233443321 0123579999999999 889999999998 999999988766
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .++++++++|.++..+|+... +++++++++++++++++.+.|+++ |+.++.+++|+|+|++++ .+
T Consensus 272 ~~~~~~~~~~~~~a~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~--~~ 338 (412)
T 2x5d_A 272 SYHDYGTFTPLQVAAIAALEGDQ----------QCVRDIARQYQQRRDVLVKGLREA-GWMVENPKASMYVWAKIP--EP 338 (412)
T ss_dssp HHHCCCCCHHHHHHHHHHHHSCS----------HHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSBSSEEEEECC--TT
T ss_pred hhhccCCCHHHHHHHHHHHhCCH----------HHHHHHHHHHHHHHHHHHHHHHHC-CCEecCCCeeeEEEEEcC--Cc
Confidence 5 568889999999998886432 346778888999999999999988 888888999999997653 11
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
. +..+...++..+++++||.+.||..|+. .+.++|||+++.++++|++++++|+++++++
T Consensus 339 ~-------~~~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 339 Y-------AHLGSLEFAKKLLQDAKVSVSPGIGFGD-YGDDHVRFALIENRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp T-------GGGCHHHHHHHHHHHHCEECEEGGGGCG-GGTTEEEEECCSCHHHHHHHHHHHHHHHHHT
T ss_pred c-------CCCCHHHHHHHHHHHCCEEEeCchhhCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 0 0002445566666778999999999863 3445999999888899999999999998764
No 12
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-47 Score=396.68 Aligned_cols=387 Identities=27% Similarity=0.485 Sum_probs=311.9
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++..+.++.+..+. .++++...+++ +|+|+.|.|...+ ++.
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~---------~i~l~~~~~~~~~-------------------~~~------- 55 (406)
T 1xi9_A 12 ASKRALSVEYAIRDVVL-PARELEKKGIK---------VIRLNIGDPVKFD-------------------FQP------- 55 (406)
T ss_dssp CCHHHHTCCC--------CHHHHHHTTCC---------CEECCCCCGGGTT-------------------CCC-------
T ss_pred HHHHHhcCChhHHHHHH-HHHHHHHcCCC---------EEEecCCCCCcCC-------------------CCC-------
Confidence 35577788888888888 88888776665 9999999983100 011
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+.. ....|++..|..++|+++++++.+.+|+++++++|++|+|+++|+..+++.++ ++||+|++
T Consensus 56 ~~~v~~a~~~~~~~----~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~-~~gd~Vl~ 130 (406)
T 1xi9_A 56 PEHMKEAYCKAIKE----GHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALL-DPGDEILV 130 (406)
T ss_dssp CHHHHHHHHHHHHT----TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhC-CCCCEEEE
Confidence 68889998888865 23479988899999999999999988888889999999999999999999998 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+++...++..|++++.++++++.+|.+|++.|++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 131 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~ 204 (406)
T 1xi9_A 131 PGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD------RTKAIAVINPNNPTGALYDKKTLEEILNIAG 204 (406)
T ss_dssp EESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc------CceEEEEECCCCCCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999987645778999999999976 7999999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCce-EEEEecCCccCCCCCCCeeEEEE--EecCCH----HHH
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS-LVSFQSVSKGYYGECGKRGGYME--VTGFSA----EVR 373 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~gl~G~riG~v~--~~~~~~----~~~ 373 (533)
+||+++|+||+|.++.+++ ...++..+ + ... +|++.||||.+ |++|+|+||++ + ++ +++
T Consensus 205 ~~~~~li~De~~~~~~~~~--~~~~~~~~-------~-~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~---~~~~~~~l~ 270 (406)
T 1xi9_A 205 EYEIPVISDEIYDLMTYEG--EHISPGSL-------T-KDVPVIVMNGLSKVY-FATGWRLGYMYFVD---PENKLSEVR 270 (406)
T ss_dssp HHTCCEEEECTTTTCBSSS--CCCCHHHH-------C-SSSCEEEEEESTTTT-CCGGGCCEEEEEEC---TTCTTHHHH
T ss_pred HcCCEEEEEcCccccccCC--CCCCHHHc-------C-CCceEEEEecccccc-CCCccEEEEEEEec---CchhHHHHH
Confidence 9999999999999988833 23444443 2 224 68899999999 78999999998 7 77 899
Q ss_pred HHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 374 EQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 374 ~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
+.+.......++++++.|.++.++|+... +++++++++++++++++.+.|+++||+.++.+++++|+|++
T Consensus 271 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 340 (406)
T 1xi9_A 271 EAIDRLARIRLCPNTPAQFAAIAGLTGPM----------DYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPK 340 (406)
T ss_dssp HHHHHHHHHTCCSCSHHHHHHHHHHHSCC----------HHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCE
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHhCCc----------HHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEe
Confidence 88887665227889999999988884322 23567788899999999999999889998889999999976
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
++... + .+...++..+++++||.+.||..|+. .+.++|||+++.++++|++++++|+++++++.+
T Consensus 341 ~~~~~---------~-~~~~~l~~~l~~~~gi~v~~g~~f~~-~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~~~ 405 (406)
T 1xi9_A 341 IEVGP---------W-KNDKEFVLDVLHNAHVLFVHGSGFGE-YGAGHFRAVFLPPIEILEEAMDRFEKFMKERLK 405 (406)
T ss_dssp ECSCS---------C-SSHHHHHHHHHHHHCEECEEGGGGCG-GGTTBEEEECCSCHHHHHHHHHHHHHHHHHC--
T ss_pred cCccC---------C-CCHHHHHHHHHHhCCEEEeCchhcCC-CCCCEEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 54100 0 12445555666688999999999873 334599999998889999999999999887543
No 13
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=5.8e-48 Score=400.99 Aligned_cols=395 Identities=18% Similarity=0.264 Sum_probs=316.0
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..++++++..+...+. +.+ +|+|+.|+|++ +. |
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-----~~~---------~i~l~~g~~~~----------------------~~-------~ 43 (422)
T 3fvs_A 7 ARRLDGIDYNPWVEFVKLAS-----EHD---------VVNLGQGFPDF----------------------PP-------P 43 (422)
T ss_dssp CGGGTTCCCCHHHHHHHHHH-----TSC---------CEECCCSSCSS----------------------CC-------C
T ss_pred HHHhhccCccHHHHHHHHhh-----cCC---------ceEeCCCCCCC----------------------CC-------C
Confidence 45666677776655554432 223 89999999875 22 7
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
+.+++++.+++.... ....|++..|..++|+++++++++.+|.++++ ++|++|+|+++++..+++.++ ++||+|++
T Consensus 44 ~~v~~a~~~~~~~~~--~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~-~~gd~vl~ 120 (422)
T 3fvs_A 44 DFAVEAFQHAVSGDF--MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALV-DEGDEVII 120 (422)
T ss_dssp HHHHHHHHHHHHSCG--GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHHhCCC--ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHc-CCCCEEEE
Confidence 889999988887621 14689999999999999999999999988888 799999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCC----------CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDE----------ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~----------~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
+.|+|+++...++..|.+++.++++. ..+|.+|++++++++++ ++++|++++||||||.+++.+
T Consensus 121 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~ 194 (422)
T 3fvs_A 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------RTKALVLNTPNNPLGKVFSRE 194 (422)
T ss_dssp EESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHH
T ss_pred cCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC------CceEEEECCCCCCCCcCCCHH
Confidence 99999999999999999999999986 23677999999999876 799999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
++++|+++|++||+++|+||+|.++.|++. ...++..+. ....+++++.||||.+ |++|+|+||+++ ++
T Consensus 195 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~------~~~~~~i~~~S~sK~~-g~~G~r~G~~~~---~~ 263 (422)
T 3fvs_A 195 ELELVASLCQQHDVVCITDEVYQWMVYDGH-QHISIASLP------GMWERTLTIGSAGKTF-SATGWKVGWVLG---PD 263 (422)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGST------TTGGGEEEEEEHHHHH-TCGGGCCEEEEC---CH
T ss_pred HHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCChhhcc------cccCcEEEEecchhcc-CCccceEEEEEe---CH
Confidence 999999999999999999999999998764 334443331 1124679999999999 889999999998 99
Q ss_pred HHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeE
Q 009517 371 EVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMY 449 (533)
Q Consensus 371 ~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~ 449 (533)
++++.+..... .+++++++.|.++..+|+.... .+..+.+++++++++++++++.+.+.|+++ |+.++.|++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 339 (422)
T 3fvs_A 264 HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQL---LFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYF 339 (422)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH---TTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSE
T ss_pred HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccc---cccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeE
Confidence 99999887765 5688899999999888752000 000012345778889999999999999998 999999999999
Q ss_pred EecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCC----CCCCceEEEEecCCcCcHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQ----VPGTWHFRCTILPQEDKIPAIVTRLT 521 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~----~~g~~~iRis~~~~~e~i~~~~~~l~ 521 (533)
+|+++.... .........+ +..++..+++++||.+.||+.|+. ..+.++|||+++.++++|++++++|+
T Consensus 340 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~ 416 (422)
T 3fvs_A 340 LITDISDFK---RKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLR 416 (422)
T ss_dssp EEEECHHHH---HHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHH
T ss_pred EEEechhhc---ccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 997664110 0000000000 446677788889999999999863 23456999999999999999999999
Q ss_pred HHHHH
Q 009517 522 DFHKN 526 (533)
Q Consensus 522 ~~l~~ 526 (533)
+++++
T Consensus 417 ~~l~~ 421 (422)
T 3fvs_A 417 KWKVE 421 (422)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 98764
No 14
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=9.7e-48 Score=399.86 Aligned_cols=398 Identities=17% Similarity=0.224 Sum_probs=303.0
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++..++++++..+...+.+. +++ +|+|+.|.|+.. ..|..- +.... ..
T Consensus 7 ~s~~~~~~~~~~~~~~~~~~~~~---~~~---------~i~l~~G~p~~~-~~p~~~---~~~~~------~~------- 57 (425)
T 2r2n_A 7 ITAASAARNPSPIRTMTDILSRG---PKS---------MISLAGGLPNPN-MFPFKT---AVITV------EN------- 57 (425)
T ss_dssp SCHHHHTCCCCSGGGHHHHHHHS---CTT---------CEECCCCCCCGG-GCSEEE---EEEEE------TT-------
T ss_pred HHHHHhcCCCchHHHHHHHhhcC---CCC---------eEEcCCcCCCch-hCCHHH---HHHHH------hh-------
Confidence 45677778888887777665432 123 899999999841 111100 00000 00
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCC-------CCCEEEcCChHHHHHHHHHHhccC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-------PNDIFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~~ 213 (533)
+..+ ....+.... ...|++..|+++||+++++++.+.+|.+.+ +++|++|+|+++++..++++++ +
T Consensus 58 ~~~~-~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~ 130 (425)
T 2r2n_A 58 GKTI-QFGEEMMKR-----ALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-N 130 (425)
T ss_dssp SCCE-EECHHHHHH-----HTSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC-C
T ss_pred cccc-cccccchhh-----hcCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC-C
Confidence 0000 000011111 346999999999999999999988897764 3799999999999999999998 8
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH------hcCCCeeEEEE-eCCCCCCccC
Q 009517 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK------AKGITVRALVV-INPGNPTGQV 286 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~------~~g~~~~~iil-~~p~NPtG~~ 286 (533)
+||+|++++|+|+++...++..|++++.++++++ ++|+++|+++++... ..+.++++|++ ++||||||.+
T Consensus 131 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~ 207 (425)
T 2r2n_A 131 PGDNVLLDEPAYSGTLQSLHPLGCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNS 207 (425)
T ss_dssp TTCEEEEESSCCHHHHHHHGGGTCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCc
Confidence 9999999999999999999999999999998753 689999999987310 00125788877 5899999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++.+++++|+++|++||++||+||+|.++.|++. +..++..+ +.+.++|++.||||++ + +|+|+||+++
T Consensus 208 ~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~-~~~~~~~~-------~~~~~~i~~~s~SK~~-~-~GlRiG~~~~- 276 (425)
T 2r2n_A 208 LTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF-RVPTFLSM-------DVDGRVIRADSFSKII-S-SGLRIGFLTG- 276 (425)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSS-CCCCTGGG-------CTTSCEEEEEESTTTT-C-STTCCEEEEE-
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCcccccCCCC-CCCCcccc-------CCCCCEEEEccchhhc-c-CccceEEEec-
Confidence 9999999999999999999999999999988653 34444443 2344689999999999 7 9999999998
Q ss_pred cCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc-eEec
Q 009517 367 GFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGI-TCNK 443 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~-~~~~ 443 (533)
++++++.+..... .++++++++|.++..+|+.. ....+.++++++++.++++++.+.+.|++ +||+ .+..
T Consensus 277 --~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 349 (425)
T 2r2n_A 277 --PKPLIERVILHIQVSTLHPSTFNQLMISQLLHEW-----GEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHV 349 (425)
T ss_dssp --EHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECC
T ss_pred --CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeC
Confidence 8999999887765 56889999999999888520 00124466788899999999999999988 5776 5678
Q ss_pred CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC--CCCceEEEEec-CCcCcHHHHHHHH
Q 009517 444 AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV--PGTWHFRCTIL-PQEDKIPAIVTRL 520 (533)
Q Consensus 444 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~--~g~~~iRis~~-~~~e~i~~~~~~l 520 (533)
|.+|+|+|++++.. .+...++.+.|.++||.+.||..|+.. .+.++|||+++ .++++|++++++|
T Consensus 350 p~~g~~~~~~~~~~------------~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l 417 (425)
T 2r2n_A 350 PAAGMFLWIKVKGI------------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVL 417 (425)
T ss_dssp CSBSSEEEEEETTC------------SCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHH
T ss_pred CCceEEEEEEeCCC------------CCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 99999999876521 123333346677899999999999743 23469999998 8999999999999
Q ss_pred HHHHHHH
Q 009517 521 TDFHKNF 527 (533)
Q Consensus 521 ~~~l~~~ 527 (533)
++++++.
T Consensus 418 ~~~l~~~ 424 (425)
T 2r2n_A 418 AQLIKES 424 (425)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988753
No 15
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-47 Score=401.07 Aligned_cols=388 Identities=18% Similarity=0.265 Sum_probs=305.6
Q ss_pred CccccccchHHHHHHH----HHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 68 CEYAVRGEIVSIAQRL----QQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 68 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++++++..+...+.++ +..+++ +|||+.|.|+. +. |+.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~g~~~~----------------------~~-------~~~ 74 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRE---------LINLGQGFFSY----------------------SP-------PQF 74 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSC---------CEECCCCSCSS----------------------CC-------CHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCC---------eEEccCCCCCC----------------------CC-------CHH
Confidence 4455555555555443 223334 99999999874 21 688
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p 223 (533)
+.+++.+++.+. ....|++..|..+||+++++++.+.+|.++++++|++|+|+++|+..+++.++ ++||+|++++|
T Consensus 75 v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p 150 (447)
T 3b46_A 75 AIKEAQKALDIP---MVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLL-NAGDEVIVFEP 150 (447)
T ss_dssp HHHHHHHHTTSG---GGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEES
T ss_pred HHHHHHHHHhCc---CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCC
Confidence 898888888641 24679999999999999999999888888888999999999999999999998 89999999999
Q ss_pred cCcchHHHHHHhCCeEEEEecCCCC----------CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHH
Q 009517 224 QYPLYSASIALHGGTLVPYYLDEAT----------GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (533)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~v~~~~~~----------~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~ 293 (533)
+|+.|...++..|++++.+++++++ +|++|+++|++++++ ++++|++++||||||.++|.++++
T Consensus 151 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~ 224 (447)
T 3b46_A 151 FFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS------KTKAVIINTPHNPIGKVFTREELT 224 (447)
T ss_dssp CCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc------CCeEEEEeCCCCCCCcccCHHHHH
Confidence 9999999999999999999987653 678999999999875 799999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|+++|++||++||+||+|.++.|++ +..++..+..+. ..+++++.||||++ |++|||+||+++ .+++++
T Consensus 225 ~i~~l~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~-----~~~~i~i~S~sK~~-~~~G~riG~~~~--~~~~l~ 294 (447)
T 3b46_A 225 TLGNICVKHNVVIISDEVYEHLYFTD--SFTRIATLSPEI-----GQLTLTVGSAGKSF-AATGWRIGWVLS--LNAELL 294 (447)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCSS--CCCCGGGSCHHH-----HTTEEEEEEHHHHT-TCTTSCCEEEEC--SCHHHH
T ss_pred HHHHHHHHcCcEEEEeccchhcccCC--CCcCHHHcCCCC-----CCcEEEEecCchhc-CCcchhhEEEEe--CCHHHH
Confidence 99999999999999999999999865 233433320111 12468999999999 889999999985 278899
Q ss_pred HHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEec
Q 009517 374 EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452 (533)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~ 452 (533)
+.+..... .+++++++.|.++..+|+.. ...+++++++++++++++++.+.|+++ |+.++.|++|+|+|+
T Consensus 295 ~~l~~~~~~~~~~~~~~~~~a~~~aL~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~ 365 (447)
T 3b46_A 295 SYAAKAHTRICFASPSPLQEACANSINDA--------LKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLV 365 (447)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHH--------HHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEE
T ss_pred HHHHHHHhhccCCCChHHHHHHHHHHhCC--------cchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEE
Confidence 88887654 66788999999988887421 113446778899999999999999998 899889999999997
Q ss_pred ccCCC---HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----CCceEEEEecCCcCcHHHHHHHHHH
Q 009517 453 RIQLP---EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP----GTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 453 ~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~----g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
+++.. .+...........++..++..+++++||.+.||..|+... +.++|||+++.++++|++++++|++
T Consensus 366 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 366 DFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKL 442 (447)
T ss_dssp ECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGG
T ss_pred ecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHH
Confidence 76421 0000000000001244566677778999999999997421 2459999999888999999999976
No 16
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=4.4e-47 Score=390.09 Aligned_cols=380 Identities=25% Similarity=0.417 Sum_probs=309.5
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..++++++..+...+.+. ++ +|+|+.|.|+. +. |
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~----~~---------~i~l~~~~~~~----------------------~~-------~ 41 (389)
T 1gd9_A 4 SDRLELVSASEIRKLFDIAAGM----KD---------VISLGIGEPDF----------------------DT-------P 41 (389)
T ss_dssp HHHHHHSCCCHHHHHHHHHHTC----SS---------CEECCCCSCSS----------------------CC-------C
T ss_pred hhHhHhCChhHHHHHHHHHhhh----cC---------eEecCCCCCCC----------------------CC-------C
Confidence 4456666666655555544432 23 89999999864 21 6
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
+.+.+++.+.+.. ....|++..|..+||+++++++.+.+|.++++++ |++|+|+++++..+++.++ ++||+|++
T Consensus 42 ~~v~~a~~~~~~~----~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~ 116 (389)
T 1gd9_A 42 QHIKEYAKEALDK----GLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFL-KDGEEVLI 116 (389)
T ss_dssp HHHHHHHHHHHHT----TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTC-CTTCEEEE
T ss_pred HHHHHHHHHHHhC----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhC-CCCCEEEE
Confidence 8899998888875 2457998889999999999999988888788899 9999999999999999987 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+++...++..|.+++.++++++++|.+|+++|++++++ ++++|++++||||||.++|.+++++|+++|+
T Consensus 117 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~ 190 (389)
T 1gd9_A 117 PTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADFVV 190 (389)
T ss_dssp EESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc------CceEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998655688999999999875 7899999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|.++.+++. +..++..+. ....+++++.||||.+ |++|+|+||+++ ++++++.+....
T Consensus 191 ~~~~~li~De~~~~~~~~~~-~~~~~~~~~------~~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~ 259 (389)
T 1gd9_A 191 EHDLIVISDEVYEHFIYDDA-RHYSIASLD------GMFERTITVNGFSKTF-AMTGWRLGFVAA---PSWIIERMVKFQ 259 (389)
T ss_dssp HTTCEEEEECTTTTCBCTTC-CCCCGGGST------TCGGGEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEehhhhhcccCCC-CCCCHhhcc------CCCCCEEEEecChhhc-CCcccceEEEEE---CHHHHHHHHHHH
Confidence 99999999999999888653 233433321 0123578999999998 889999999998 899999888766
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .+++++++.|.++..+|+... . .+++++++++++++++++.+.|+++ |+.+..+++++|+|++++ ..
T Consensus 260 ~~~~~~~~~~~~~a~~~~l~~~~-------~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~~ 328 (389)
T 1gd9_A 260 MYNATCPVTFIQYAAAKALKDER-------S-WKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIR--DT 328 (389)
T ss_dssp TTTTCSCCHHHHHHHHHHHTCHH-------H-HHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCBTTEECCBCG--GG
T ss_pred hhhccCCCHHHHHHHHHHHhCCC-------c-chHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEecc--CC
Confidence 5 567889999999998886311 1 1256778889999999999999998 888888999999997654 10
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+. +...++..+++++||.+.||..|+. .+.++|||+++.++++|++++++|++++++
T Consensus 329 --------~~-~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 329 --------GL-TSKKFSELMLKEARVAVVPGSAFGK-AGEGYVRISYATAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp --------TC-CHHHHHHHHHHHTCEECEEGGGGCG-GGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred --------CC-CHHHHHHHHHHhCCEEEeCchhhCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 11 2345555665589999999998873 344599999988889999999999998865
No 17
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-46 Score=385.66 Aligned_cols=373 Identities=26% Similarity=0.409 Sum_probs=312.4
Q ss_pred cCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
+++++...+++++..+...+.+....|++ +|+|+.|.|.. +.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~~~~~~----------------------~~------- 55 (389)
T 1o4s_A 14 VSRRISEIPISKTMELDAKAKALIKKGED---------VINLTAGEPDF----------------------PT------- 55 (389)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHTTCC---------CEECCCSSCSS----------------------CC-------
T ss_pred HHHHHhhcCccHHHHHHHHHHHHHhcCCC---------EEEccCCCCCC----------------------CC-------
Confidence 35567778888888888888777665555 99999999863 21
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+.+.. ....|++..|..+||+++++++.+.+|.++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 56 ~~~v~~a~~~~~~~----~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~-~~gd~Vl~ 130 (389)
T 1o4s_A 56 PEPVVEEAVRFLQK----GEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL-DPGDEVIV 130 (389)
T ss_dssp CHHHHHHHHHHHTT----CCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhC-CCCCEEEE
Confidence 68888888888865 23579888899999999999999888887789999999999999999999998 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
++|+|+++...++..|.+++.++++++++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 131 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~ 204 (389)
T 1o4s_A 131 FSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG------KTKAVLINSPNNPTGVVYRREFLEGLVRLAK 204 (389)
T ss_dssp EESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999997655788999999999876 7899999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
++|+++|+||+|.++.+++ +..++..+. .....++++.||||.+ |++|+|+||+++ ++++++.+....
T Consensus 205 ~~~~~li~Dea~~~~~~~g--~~~~~~~~~------~~~~~~i~~~s~sK~~-~~~G~r~G~l~~---~~~~~~~l~~~~ 272 (389)
T 1o4s_A 205 KRNFYIISDEVYDSLVYTD--EFTSILDVS------EGFDRIVYINGFSKSH-SMTGWRVGYLIS---SEKVATAVSKIQ 272 (389)
T ss_dssp HHTCEEEEECTTTTSBCSS--CCCCHHHHC------SSSTTEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEEccccccccCC--CCCCHhhcC------CCCCcEEEEeechhhc-CCcccceEEEEe---CHHHHHHHHHHh
Confidence 9999999999999988865 234544431 1123578999999999 789999999998 899999888776
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .++++++++|.++..+|+.. +++++++++++++++.+.|+++ |+.++.+++++|+|++++ .
T Consensus 273 ~~~~~~~~~~~~~a~~~~l~~~-------------~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~-- 335 (389)
T 1o4s_A 273 SHTTSCINTVAQYAALKALEVD-------------NSYMVQTFKERKNFVVERLKKM-GVKFVEPEGAFYLFFKVR-G-- 335 (389)
T ss_dssp HHHTCSCCHHHHHHHHHHTTCC-------------CHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSBSSEEEEECS-S--
T ss_pred hhcccCCCHHHHHHHHHHHhcc-------------HHHHHHHHHHHHHHHHHHHHhc-CCeeecCCcceEEEEeCC-C--
Confidence 5 56788999999998888642 3556778889999999999998 888888999999997654 1
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+...++..+++++||.+.||..|+. ++ +|||+++.++++|++++++|+++++
T Consensus 336 -----------~~~~l~~~l~~~~gi~v~~g~~f~~-~~--~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 336 -----------DDVKFCERLLEEKKVALVPGSAFLK-PG--FVRLSFATSIERLTEALDRIEDFLN 387 (389)
T ss_dssp -----------CHHHHHHHHHHHHCEECEEGGGGTC-TT--EEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred -----------CHHHHHHHHHHHCCEEEeCchhcCC-CC--eEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 2344555666588999999998873 33 9999999888899999999988764
No 18
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-46 Score=387.94 Aligned_cols=375 Identities=20% Similarity=0.333 Sum_probs=305.1
Q ss_pred cCcccccC--ccccccchHHHHHHHHHH--hhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccc
Q 009517 61 LNPKVLKC--EYAVRGEIVSIAQRLQQE--LQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSET 136 (533)
Q Consensus 61 ~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~ 136 (533)
+++++..+ .++.+..++..+.++... +++ +|||+.|+|+. +.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~l~~~~~~~----------------------~~--- 49 (398)
T 3ele_A 4 VNESMYQLGSVRSAIRELFEYGKKRAAIVGKEN---------VYDFSIGNPSI----------------------PA--- 49 (398)
T ss_dssp SCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGG---------CEECCSCCCCS----------------------CC---
T ss_pred hhHHHhccccCchhHHHHHHHHHHHHhhcCCCC---------eEEeecCCCCC----------------------CC---
Confidence 45566665 467777788888777664 344 99999998874 21
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN- 215 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g- 215 (533)
|+.+.+++.+++.+........|++..|..+||+++++++.+.+|.++++++|++|+|+++++..+++.++ ++|
T Consensus 50 ----~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~-~~g~ 124 (398)
T 3ele_A 50 ----PQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALT-SDAY 124 (398)
T ss_dssp ----CHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CSTT
T ss_pred ----CHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHc-CCCC
Confidence 68899999888876211014679999999999999999999999988899999999999999999999998 899
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
|+|+++.|+|+++...++..|++++.+|++++ +|++|+++|++++++ ++++|++++||||||.+++.+++++|
T Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l 197 (398)
T 3ele_A 125 DEFITIAPYFPEYKVFVNAAGARLVEVPADTE-HFQIDFDALEERINA------HTRGVIINSPNNPSGTVYSEETIKKL 197 (398)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCCTT-TSSCCHHHHHHTCCT------TEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCCc-CCcCCHHHHHHHhCc------CCCEEEEcCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999754 789999999999876 79999999999999999999999999
Q ss_pred HHHHHH------cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 296 VDFCKK------EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 296 ~~l~~~------~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+++|++ ||+++|+||+|.++.+++. ...... +. ..+++++.||||++ |++|+|+||+++ +
T Consensus 198 ~~~~~~~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~-----~~~~i~~~s~sK~~-~~~G~r~G~~~~---~ 263 (398)
T 3ele_A 198 SDLLEKKSKEIGRPIFIIADEPYREIVYDGI-KVPFVT----KY-----YDNTLVCYSYSKSL-SLPGERIGYVLV---P 263 (398)
T ss_dssp HHHHHHHHHHHTSCCEEEEECTTTTCBCTTC-CCCCGG----GT-----CSSEEEEEESTTTS-SCTTTCCEEEEC---C
T ss_pred HHHHHhhhhccCCCeEEEEeccccccccCCC-CcCChH----hh-----cCCeEEEEehhhcC-CCccceeEEEEE---c
Confidence 999999 9999999999999988663 222211 11 23579999999999 889999999998 6
Q ss_pred HH------HHHHHHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 370 AE------VREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 370 ~~------~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
++ +...+..... .+++++.+.|.++..+++... .+++++++++++.+.|+++ |+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------------~~~~~~~~~~~l~~~L~~~-g~~~ 327 (398)
T 3ele_A 264 DEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG---------------DINAYKENRDLLYEGLTRI-GYHC 327 (398)
T ss_dssp TTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC---------------CHHHHHHHHHHHHHHHHHH-TCCE
T ss_pred chhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH---------------HHHHHHHHHHHHHHHHHHc-CCee
Confidence 55 3444443332 356778899998888876432 2456778888999999888 8999
Q ss_pred ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHH
Q 009517 442 NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLT 521 (533)
Q Consensus 442 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~ 521 (533)
+.+++++|+|++++. .+...++ +.|.++||.+.||..|+. ++ +|||+++.++++|++++++|+
T Consensus 328 ~~~~~~~~~~~~~~~-------------~~~~~~~-~~l~~~gi~v~~g~~~~~-~~--~iRis~~~~~e~i~~~l~~l~ 390 (398)
T 3ele_A 328 FKPDGAFYMFVKALE-------------DDSNAFC-EKAKEEDVLIVAADGFGC-PG--WVRISYCVDREMIKHSMPAFE 390 (398)
T ss_dssp ECCSBSSEEEEECSS-------------SCHHHHH-HHHHTTTEECEESGGGTC-TT--EEEEECCSCHHHHHHHHHHHH
T ss_pred cCCCeeEEEEEEcCC-------------CCHHHHH-HHHHHCCEEEeCccccCC-CC--eEEEEecCCHHHHHHHHHHHH
Confidence 999999999976541 1234444 456789999999999974 33 999999989999999999999
Q ss_pred HHHHHHH
Q 009517 522 DFHKNFM 528 (533)
Q Consensus 522 ~~l~~~~ 528 (533)
+++++++
T Consensus 391 ~~l~~~~ 397 (398)
T 3ele_A 391 KIYKKYN 397 (398)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988753
No 19
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=4.4e-47 Score=392.27 Aligned_cols=378 Identities=17% Similarity=0.226 Sum_probs=303.5
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..++++++..+...+.+ ..|++ +|||+.|.|.. .. +
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~--~~g~~---------~idl~~g~~~~----------------------~~-------~ 62 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIE--HGPLP---------LINMAVGIPDG----------------------PT-------P 62 (404)
T ss_dssp CHHHHTSCCCTTC-------C--CCSSC---------CEECCCCSCSS----------------------CC-------C
T ss_pred hhHhhhCCchHHHHHHHHHHh--cCCCC---------EEecCCcCCCC----------------------CC-------C
Confidence 445666666665555443332 11222 89999999864 21 6
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
+.+.+++.+++.+. ....|++..|..+||+++++++.+.+|.++++ ++|++|+|+++++..+++.++ ++||+|++
T Consensus 63 ~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~-~~gd~Vl~ 138 (404)
T 2o1b_A 63 QGIIDHFQKALTIP---ENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVI-NPGDYVLL 138 (404)
T ss_dssp HHHHHHHHHHTTCH---HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhc-CCCCEEEE
Confidence 78888888877541 14579888899999999999999888987776 799999999999999999998 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|+++...++..|.+++.+++++ ++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 139 ~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 211 (404)
T 2o1b_A 139 PDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIID------KTKLIYLTYPNNPTGSTATKEVFDEAIAKFK 211 (404)
T ss_dssp EESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHT
T ss_pred cCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhcc------CceEEEEcCCCCCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999886 5678999999999976 6999999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
++|++||+||+|.++.+++. ..++..+. ....+++++.||||.+ |++|+|+||+++ ++++++.+....
T Consensus 212 ~~~~~li~De~~~~~~~~g~--~~~~~~~~------~~~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~ 279 (404)
T 2o1b_A 212 GTDTKIVHDFAYGAFGFDAK--NPSILASE------NGKDVAIEIYSLSKGY-NMSGFRVGFAVG---NKDMIQALKKYQ 279 (404)
T ss_dssp TSSCEEEEECTTTTCBSSSC--CCCGGGST------THHHHEEEEEESTTTT-TCGGGCCEEEEE---CHHHHHHHHHHH
T ss_pred HcCCEEEEEccchhcccCCC--CCChhhcC------CCCCCEEEEEecchhc-cCchhheEeEec---CHHHHHHHHHHH
Confidence 99999999999999888652 23333321 0113578999999999 789999999998 999999988766
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .++++++++|.++..+|+.. .+++++++++++++++.+.+.|+++ |+.++.+++++|+|++++ .+
T Consensus 280 ~~~~~~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~--~~ 346 (404)
T 2o1b_A 280 THTNAGMFGALQDAAIYALNHY----------DDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVHAKGGIYVWLETP--PG 346 (404)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHC----------HHHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCCBSSEEEEECC--TT
T ss_pred hhccCCCCHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHHHHHHhc-CCeecCCCcceEEEEeCC--CC
Confidence 5 55788999999998887421 2456778888999999999999998 899989999999997654 11
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
. +...++..+++++||.+.||..|+. .+.++|||+++.++++|++++++|++++++
T Consensus 347 ---------~-~~~~l~~~l~~~~gi~v~~g~~f~~-~~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 347 ---------Y-DSEQFEQFLVQEKSILVAPGKPFGE-NGNRYVRISLALDDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp ---------C-CHHHHHHHHHHHHCEECEESGGGCG-GGTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred ---------C-CHHHHHHHHHHHCCEEEeCchhhCc-CCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 1 2345566767678999999999873 334599999988889999999999988754
No 20
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=1.2e-46 Score=394.51 Aligned_cols=384 Identities=19% Similarity=0.260 Sum_probs=305.3
Q ss_pred cCcCcccccCcc-ccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCccccc
Q 009517 59 DSLNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQ 137 (533)
Q Consensus 59 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~ 137 (533)
..+++.+..+++ .++..+..+........ +++ ++|||+.|+|+. +.
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~------~~i~l~~g~~~~----------------------~~---- 83 (449)
T 3qgu_A 37 VQRNENFGKLRAGYLFPEIARRRKAHQEKN-PDA------KIISLGIGDTTE----------------------PL---- 83 (449)
T ss_dssp CCCCHHHHHCCSCCHHHHHHHHHHHHHHHC-TTC------CCEECSSCCCCC----------------------CC----
T ss_pred hhhhHHHHhCCCcchHHHHHHHHHHHHhhC-CCC------CEEEeeCCCCCC----------------------CC----
Confidence 345667777776 35556666666555431 122 299999998774 22
Q ss_pred CCCCHHHHHHHHHHHhcCCC-CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 138 GLFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 138 ~~~p~~v~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
|+.+++++.+++.+... .....|++..|..+||+++++++. +|+.+++++|++|+|+++++..+ ..++ ++||
T Consensus 84 ---~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~-~~gd 156 (449)
T 3qgu_A 84 ---PKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMF-GSKP 156 (449)
T ss_dssp ---CHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHH-CSSS
T ss_pred ---CHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHh-CCCC
Confidence 78999999888874310 135689999999999999999997 77778899999999999999998 7777 7999
Q ss_pred eEEEcCCcCcchHHHHHHhCCe----------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 217 GILCPIPQYPLYSASIALHGGT----------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~----------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
+|++++|+|+++...+...|++ ++.+++++++++..|++.+ +++++|++++||||||.+
T Consensus 157 ~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~ 225 (449)
T 3qgu_A 157 TVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAA 225 (449)
T ss_dssp CEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCC
T ss_pred EEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCc
Confidence 9999999999999999999999 9999998776777776432 278999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++.+++++|+++|++||+++|+||+|.+|.+++. ...++..+. .....+|++.||||++ |++|+|+||+++
T Consensus 226 ~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~------~~~~~~i~~~s~sK~~-g~~G~r~G~~~~- 296 (449)
T 3qgu_A 226 ATRAQLTELVNFARKNGSILVYDAAYALYISNPD-CPKTIYEIP------GADEVAIETCSFSKYA-GFTGVRLGWTVV- 296 (449)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT-SCSSGGGST------TGGGTEEEEEECSGGG-TCTTCCCEEEEC-
T ss_pred CCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC-CCCCHhhcc------CCCCcEEEEecchhhc-CCccceeEEEec-
Confidence 9999999999999999999999999999988653 233433321 1123578999999999 899999999998
Q ss_pred cCCHHHHH--------HHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 009517 367 GFSAEVRE--------QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE 437 (533)
Q Consensus 367 ~~~~~~~~--------~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 437 (533)
++++++ .+..... .++++++++|.++..+|++. ..+++++++++++++++++.+.|+++
T Consensus 297 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~- 364 (449)
T 3qgu_A 297 --PKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPE---------GLKEMNAMIKFYKENAQILKTTFTEM- 364 (449)
T ss_dssp --CTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHH---------HHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred --CHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhc---------CHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 777654 4444444 55688999999999988621 12557788899999999999999998
Q ss_pred CceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHH
Q 009517 438 GITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIV 517 (533)
Q Consensus 438 g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~ 517 (533)
|+.+..+++++|+|++++ + .+...++..+++++||.+.||..|+ ..+.++|||++..++++|++++
T Consensus 365 g~~~~~~~~~~~~~~~~~---~----------~~~~~~~~~l~~~~gI~v~pg~~f~-~~~~~~iRis~~~~~e~i~~~l 430 (449)
T 3qgu_A 365 GFSVYGGDDAPYIWVGFP---G----------KPSWDVFAEILERCNIVTTPGSGYG-PAGEGFVRASAFGSRENILEAV 430 (449)
T ss_dssp TCCEEESSSSSEEEEECT---T----------SCHHHHHHHHHHHHCEECEEGGGGC-GGGTTEEEEECCSCHHHHHHHH
T ss_pred CCeeeCCCCeeEEEEECC---C----------CCHHHHHHHHHHHCCEEEecchHhC-CCCCCeEEEEecCCHHHHHHHH
Confidence 999999999999997664 1 1245566777877899999999998 4556699999988999999999
Q ss_pred HHHHHHHHHHH
Q 009517 518 TRLTDFHKNFM 528 (533)
Q Consensus 518 ~~l~~~l~~~~ 528 (533)
++|++++++-.
T Consensus 431 ~~l~~~~~~~~ 441 (449)
T 3qgu_A 431 RRFKEAYGKRN 441 (449)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHHhcC
Confidence 99999987654
No 21
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5.8e-47 Score=387.28 Aligned_cols=363 Identities=14% Similarity=0.188 Sum_probs=302.8
Q ss_pred HHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCC
Q 009517 79 IAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGR 158 (533)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~ 158 (533)
++.+...|+.++++ +|||+.|.+.. +. |+.+++++.+++.+
T Consensus 11 ~~~g~~~~d~~g~~------~idl~~~~~~~----------------------~~-------~~~v~~a~~~~~~~---- 51 (377)
T 3fdb_A 11 RARNTMKWTRYGQG------VLPLWVAESDF----------------------ST-------CPAVLQAITDAVQR---- 51 (377)
T ss_dssp HHTCCHHHHSSCTT------SEECCSSCCCS----------------------CC-------CHHHHHHHHHHHHT----
T ss_pred cCCCCceeeccCCC------eeeecccCCCC----------------------CC-------CHHHHHHHHHHHHc----
Confidence 44555566666665 99999998764 22 78999999988876
Q ss_pred CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCe
Q 009517 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 159 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
....|++ .| .++|+++++++++.+|.++++++|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|.+
T Consensus 52 ~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~ 128 (377)
T 3fdb_A 52 EAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFT-PAQSKVIVPTPAYPPFFHLLSATQRE 128 (377)
T ss_dssp TCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCCEEEEESCCTHHHHHHHHHTCC
T ss_pred CCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCcHhHHHHHHHcCCE
Confidence 3567998 87 899999999999999988899999999999999999999998 89999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccc
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~ 318 (533)
++.++++.+ +|++++++++++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.++
T Consensus 129 ~~~~~~~~~----~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 198 (377)
T 3fdb_A 129 GIFIDATGG----INLHDVEKGFQA------GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFD 198 (377)
T ss_dssp EEEEECTTS----CCHHHHHHHHHT------TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS
T ss_pred EEEccCCCC----CCHHHHHHHhcc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcC
Confidence 999998763 899999999987 6899999999999999999999999999999999999999999999887
Q ss_pred CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHH
Q 009517 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLV 397 (533)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~ 397 (533)
+.....++..+. ...+++++.||||.+ |++|+|+||+++ .++++++.+..... .+++++++++.++.++
T Consensus 199 g~~~~~~~~~~~-------~~~~~i~~~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 268 (377)
T 3fdb_A 199 GQHTVAAGVSDT-------AASVCITITAPSKAW-NIAGLKCAQIIF--SNPSDAEHWQQLSPVIKDGASTLGLIAAEAA 268 (377)
T ss_dssp SCCCCGGGSCHH-------HHHHEEEEECSTTTT-TCGGGCCEEEEC--CSHHHHHHHHHSCHHHHCCCCHHHHHHHHHH
T ss_pred CCCCcccHHHcc-------CCCcEEEEEeChHhc-cCcchhheEEEe--CCHHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 612233332221 123578999999999 889999999876 37889888887665 5678899999998888
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHH
Q 009517 398 MSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYC 476 (533)
Q Consensus 398 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (533)
|+.. .+++++++++++++++.+.+.|++ +||+.++.+++++++|++++.. +. +..++
T Consensus 269 l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~~~ 326 (377)
T 3fdb_A 269 YRYG----------TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDT----------TI--EGSPS 326 (377)
T ss_dssp HHHC----------HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTS----------CC--CSCHH
T ss_pred Hhcc----------HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECccc----------CC--CHHHH
Confidence 7521 245677888999999999999998 7899999999999999766521 11 12345
Q ss_pred HHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 477 RRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 477 ~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
..+++++||.+.||..|+. .+.+++||+++.++++|++++++|++++++
T Consensus 327 ~~l~~~~gi~v~~g~~~~~-~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 327 EFFIEKAKVAMNDGAWFGE-DGTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHCEECEEGGGGCG-GGTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCEEecCChhccC-CCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 6777777999999999984 345599999998889999999999998764
No 22
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.6e-46 Score=388.07 Aligned_cols=360 Identities=20% Similarity=0.292 Sum_probs=300.0
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
.+|||+.|+|.. . ..|+.+++++.+++.+. ....|++..|..+++++++
T Consensus 40 ~~id~~~g~~~~-----------------------~-----~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~l~ 88 (407)
T 3nra_A 40 RPVDFSHGDVDA-----------------------H-----EPTPGAFDLFSAGVQSG---GVQAYTEYRGDLGIRDLLA 88 (407)
T ss_dssp CCEETTSCCTTT-----------------------S-----CCCTTHHHHHHHHHHHT---HHHHSCCTTCCHHHHHHHH
T ss_pred ceeeecCcCCCC-----------------------C-----CCcHHHHHHHHHHHhcC---CCCCcCCCCCCHHHHHHHH
Confidence 489999998871 1 11788999998888752 2457999999999999999
Q ss_pred HHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCC----CCCCCC
Q 009517 178 AGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE----ATGWGL 252 (533)
Q Consensus 178 ~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~----~~~~~l 252 (533)
+++.+.+|.++++ ++|++|+|+++++..+++.++ ++||+|+++.|+|.++...++..|++++.++++. +.++++
T Consensus 89 ~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 167 (407)
T 3nra_A 89 PRLAAFTGAPVDARDGLIITPGTQGALFLAVAATV-ARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGL 167 (407)
T ss_dssp HHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTC-CTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCB
T ss_pred HHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhC-CCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCc
Confidence 9999988987766 799999999999999999998 8999999999999999999999999999999842 347789
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhh
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRS 332 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~ 332 (533)
|+++|++++++ ++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. .+.++..+...
T Consensus 168 d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~~~~ 240 (407)
T 3nra_A 168 DLTGLEEAFKA------GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGA-SYTHLRAEAAV 240 (407)
T ss_dssp CHHHHHHHHHT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTC-CCCCGGGCTTS
T ss_pred CHHHHHHHHhh------CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCCChhhcCcc
Confidence 99999999987 789999999999999999999999999999999999999999999988653 33443332100
Q ss_pred cCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHH
Q 009517 333 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESY 411 (533)
Q Consensus 333 ~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~ 411 (533)
...+++++.||||++ |++|+|+||+++ ++++++.+..... .++++++++|.++..+|+...
T Consensus 241 -----~~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~--------- 302 (407)
T 3nra_A 241 -----DAENVVTIMGPSKTE-SLSGYRLGVAFG---SRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAP--------- 302 (407)
T ss_dssp -----CGGGEEEEECSSSTT-CCGGGCCEEEEE---CHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCT---------
T ss_pred -----cCCcEEEEeCccccc-CCCeeeEEEEEc---CHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccc---------
Confidence 133579999999999 889999999998 9999999887765 567788899988888886432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCC
Q 009517 412 CAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGS 491 (533)
Q Consensus 412 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 491 (533)
+++++++++++++++.+.+.|++++++.++.+++++|+|++++... .+...++..+++++||.+.||.
T Consensus 303 -~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~gi~v~~g~ 370 (407)
T 3nra_A 303 -GWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLA-----------VAPAEFVKILRLQAGVVVTPGT 370 (407)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBS-----------SCHHHHHHHHHHHHCEECEEGG
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCC-----------CCHHHHHHHHHHhCCEEEeCch
Confidence 2345667778889999999999988999999999999997665210 1244556666677899999999
Q ss_pred CCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 492 GFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 492 ~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.|+ ..+.++|||+++.++++|++++++|+++++++
T Consensus 371 ~~~-~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 371 EFS-PHTADSVRLNFSQDHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp GTC-TTCTTBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred hhC-CCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 998 45566999999888999999999999998865
No 23
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=8.3e-47 Score=392.25 Aligned_cols=338 Identities=15% Similarity=0.152 Sum_probs=273.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHH--HhccCCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQ--LLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~--~l~~~~gd 216 (533)
++.+.+++.+.+... ....|++..|..+||+++++++.+.++..++++ +|++|+|+++|+..+++ .++ ++||
T Consensus 69 ~~~v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~-~~gd 144 (420)
T 4f4e_A 69 LRAVRDAEKARVEAG---LPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTL-NPKA 144 (420)
T ss_dssp CHHHHHHHHHHHHTC---CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH-CTTC
T ss_pred cHHHHHHHHHHhccC---CCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHh-CCCC
Confidence 588999988888752 256899999999999999999986655444678 89999999999999954 456 7999
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+|++++|+|.+|...++..|++++.+++.++.++++|++.+++.+++. .++++++++++||||||.+++.+++++|+
T Consensus 145 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~ 221 (420)
T 4f4e_A 145 KVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY---EPGTIVVLHACCHNPTGVDLNDAQWAQVV 221 (420)
T ss_dssp CEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999954457899999999999732 12688999999999999999999999999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH-
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ- 375 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~- 375 (533)
++|++||+++|+||+|.+|.+++.....++..+. +. ..++|++.||||++ |++|+|+||+++...++++++.
T Consensus 222 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~-----~~~~i~~~S~SK~~-~~~G~RiG~~~~~~~~~~~~~~~ 294 (420)
T 4f4e_A 222 EVVKARRLVPFLDIAYQGFGESIEADAAAVRLFA-AA-----NLNVFVSSSFSKSF-SLYGERVGALSIITDSKDEAARV 294 (420)
T ss_dssp HHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHH-HT-----TCCEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHHHH
T ss_pred HHHHHCCcEEEEccccccccCCcchhhHHHHHHH-hc-----CCCEEEEEeCCccC-cCcCCCcEEEEEEcCCHHHHHHH
Confidence 9999999999999999999986533344444432 21 23579999999999 8999999999754445666544
Q ss_pred ---HHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEecCCcee
Q 009517 376 ---IYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNKAEGAM 448 (533)
Q Consensus 376 ---l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~gg~ 448 (533)
+..... .+.+++.++|.++..+|.+. ...+.|.+++++++++++++++.+.+.|+++ +|+.+..|++|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 370 (420)
T 4f4e_A 295 LSQLKRVIRTNYSNPPTHGGAIVAAVLASP----ELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGM 370 (420)
T ss_dssp HHHHHHHHHTTTSSCCSHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSS
T ss_pred HHHHHHHHhcccCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccE
Confidence 333322 45677899999998888642 1223356778899999999999999999987 478888999999
Q ss_pred EEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHH
Q 009517 449 YLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l 524 (533)
|+|++++ . ..+..+++++||++.|+ .|||++ .++++|++++++|++++
T Consensus 371 ~~~~~~~----------------~-~~~~~~l~~~gI~v~~~-----------~Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 371 FSYSGLT----------------S-AQVDRLREEFGIYAVST-----------GRICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp EEECCCC----------------H-HHHHHHHHHHCEECCTT-----------SEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred EEEeCCC----------------H-HHHHHHHHhCCEEecCC-----------CeEEEecCCHHHHHHHHHHHHHHh
Confidence 9996553 1 22557788899999973 299998 58889999999999876
No 24
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-46 Score=383.29 Aligned_cols=366 Identities=20% Similarity=0.261 Sum_probs=298.0
Q ss_pred ccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHH
Q 009517 71 AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ 150 (533)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~ 150 (533)
+++..+.....+....|++ +|||+.|.|.. +. |+.+.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~g~~---------~idl~~~~~~~----------------------~~-------~~~v~~a~~~ 49 (376)
T 2dou_A 8 SVFLVVDEAKRKARERGVG---------LIDLSIGSTDL----------------------PP-------PEAPLKALAE 49 (376)
T ss_dssp HHHHHHHHHHHHHHHTTCC---------CEECSSCCCCC----------------------CC-------CHHHHHHHHH
T ss_pred chHHHHHHHHHHhhccCCC---------EEeccCCCCCC----------------------CC-------CHHHHHHHHH
Confidence 4555555555555554444 99999999864 21 6888888888
Q ss_pred HHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH
Q 009517 151 ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS 229 (533)
Q Consensus 151 ~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~ 229 (533)
++.+. ....|++..|..+||+++++++.+.+|.+++++ +|++|+|+++++..+++.+. ++||+|+++.|+|+++.
T Consensus 50 ~~~~~---~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~vl~~~p~y~~~~ 125 (376)
T 2dou_A 50 ALNDP---TTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALT-EPEDLLLLPEVAYPSYF 125 (376)
T ss_dssp HTTCG---GGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCHHHH
T ss_pred HHhCC---CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhc-CCCCEEEECCCCcHhHH
Confidence 87541 256788877899999999999998889877777 99999999999999999998 79999999999999999
Q ss_pred HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 230 ~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
..++..|.+++.+++ +++|.+|++++++++++ ++++|++++||||||.+++.+++++|+++|++||+++|+|
T Consensus 126 ~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 197 (376)
T 2dou_A 126 GAARVASLRTFLIPL--REDGLADLKAVPEGVWR------EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHD 197 (376)
T ss_dssp HHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhcc------CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999999999999998 34678999999999976 6999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCCh
Q 009517 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNI 388 (533)
Q Consensus 310 e~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~ 388 (533)
|+|.++.+++. ..++..+. +...+++++.||||.+ |++|+|+||+++ ++++++.+..... .++++++
T Consensus 198 e~~~~~~~~~~--~~~~~~~~------~~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~ 265 (376)
T 2dou_A 198 NPYVDQVYEGE--APSPLALP------GAKERVVELFSLSKSY-NLAGFRLGFALG---SEEALARLERVKGVIDFNQYA 265 (376)
T ss_dssp CTTGGGBSSSC--CCCGGGST------TGGGTEEEEEEHHHHH-TCGGGCCEEEEE---CHHHHHHHHHHHHHHCCCSCH
T ss_pred ccchhcccCCC--CCChhhcC------CCCCcEEEEecchhhc-CChhheeEEEec---CHHHHHHHHHHHHhcccCCCH
Confidence 99999888652 22322221 1123578999999999 789999999998 9999999887665 5567899
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcC
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEK 468 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~ 468 (533)
++|.++..+|+.. .+++++++++++++++.+.+.|+++ +.+..+.+++|+|++++ .+
T Consensus 266 ~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~--~~--------- 322 (376)
T 2dou_A 266 GVLRMGVEALKTP----------KEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLP--EG--------- 322 (376)
T ss_dssp HHHHHHHHHHTSC----------HHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECC--TT---------
T ss_pred HHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECC--CC---------
Confidence 9999999988631 2456778888999999999999887 78888899999997654 11
Q ss_pred CCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 469 TVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 469 ~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
. +...++..+++ +||.+.||..|+. .+.++|||+++.++++|++++++|++++
T Consensus 323 ~-~~~~~~~~l~~-~gi~v~~g~~f~~-~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 323 V-DDLEFGLRLVE-RGVALAPGRGFGP-GGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp C-CHHHHHHHHHH-TTEECEEGGGGCG-GGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred C-CHHHHHHHHHH-CCEEEcCchhhCC-CCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 1 23445555555 5999999999873 3445999999888889999999998764
No 25
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=8.5e-46 Score=383.69 Aligned_cols=388 Identities=16% Similarity=0.148 Sum_probs=302.1
Q ss_pred CcccccCccccccchHHHHHHHHHH--hhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQE--LQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGL 139 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~ 139 (533)
+++.....++++..+..++++.... +++ +|+|++|+|..... +..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~i~l~~g~~~~~~~------------------------~~~ 55 (413)
T 3t18_A 9 KRATWNNGPDLAFDINNKANAAIEKYGREA---------VINAALGTLLDDKG------------------------KII 55 (413)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHHHHHHCGGG---------CEECCSCCCBCTTS------------------------CBC
T ss_pred hhcccCCCCChHHHHHHHHhhhhhhccccc---------eEeccccCccCCCC------------------------CcC
Confidence 4556666777777777777777766 556 99999999843111 111
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
.|+.+.+++.+.... ....|++..|..+||+++++++.+.++.. ++++|++|+|+++|+..+++.++ ++||+|+
T Consensus 56 ~~~~v~~a~~~~~~~----~~~~Y~~~~g~~~lr~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~-~~gd~Vl 129 (413)
T 3t18_A 56 ALPSVYDRLDEMDRS----HIASYAPIEGEKDYRKIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYL-DEGDPLI 129 (413)
T ss_dssp CCHHHHHHHHHSCHH----HHHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHC-CSSCEEE
T ss_pred ChHHHHHHHHhcCcc----cccCcCCCCCCHHHHHHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhc-CCCCEEE
Confidence 256666665543322 25679999999999999999997765533 45599999999999999999998 8999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee-EEEEeCC-CCCCccCCCHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR-ALVVINP-GNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~-~iil~~p-~NPtG~~~s~~~l~~i~~ 297 (533)
++.|+|..|...++..|++++.+++.++ +|++|+++|++++++.... +++ ++++++| |||||.+++.+++++|++
T Consensus 130 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~ 206 (413)
T 3t18_A 130 CHDYYWAPYRKICEEFGRNFKTFEFFTD-DFAFNIDVYKEAIDEGIRD--SDRIASLINSPGNNPTGYSLSDEEWDEVIT 206 (413)
T ss_dssp EESSCCTHHHHHHHHHTCEEEEECCBCT-TSSBCHHHHHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred ECCCCcccHHHHHHHhCCeEEEeeccCC-CCCcCHHHHHHHHHHHhhc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999998654 4899999999999762111 456 7888899 999999999999999999
Q ss_pred HHH------HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 298 FCK------KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 298 l~~------~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
+|+ +||++||+||+|.+|.+++. ...++......+ .++..+|+++||||++ |++|+|+||+++...+++
T Consensus 207 ~~~~~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~---~~~~~~i~~~S~sK~~-~~~G~riG~~~~~~~~~~ 281 (413)
T 3t18_A 207 FLKEKAEDKDKKITLIVDVAYLEFAGDGD-QQRKFFEKFSNL---PRNLFVVVAFSMSKSH-TAYGLRSGAAVGISSSKE 281 (413)
T ss_dssp HHHHHTTSTTCEEEEEEECTTGGGSSSSS-TTTGGGGGGTTC---CTTEEEEEEEEHHHHT-TCGGGCCEEEEEEESCHH
T ss_pred HHHHHhhccCCcEEEEEecccccccCChh-hHHHHHHHHhhc---CCCeeEEEEEecCccC-CCcCcCcEEEEEecCCHH
Confidence 999 89999999999999988653 233333322333 3444468999999999 899999999986434788
Q ss_pred HHHHHHHhhh-----ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Q 009517 372 VREQIYKVAS-----VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEG 446 (533)
Q Consensus 372 ~~~~l~~~~~-----~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g 446 (533)
+++.+.+... ..++++.++|.++..+|++. .+..|.++++.+++.++++++++.+.|+++ |+.+..+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~ 355 (413)
T 3t18_A 282 IIEEFEASLAHSARCNWSNGTHAAQNILIELERAE-----NKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFG 355 (413)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCS
T ss_pred HHHHHHHHHHHhhhccccCCChHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCc
Confidence 9988877643 22457899999998888631 221256667788899999999999999998 999999999
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~ 525 (533)
+||+|+++. +...++ +.|.++||.+.|| .++|||+++ .+++++ +++|.++++
T Consensus 356 ~~~~~~~~~---------------~~~~~~-~~l~~~gv~v~~g--------~~~iRis~~~~~~~~~---l~~l~~~l~ 408 (413)
T 3t18_A 356 GFFTFIPTD---------------KAFDIV-KDLEKENIFTIPS--------AKGIRVAICGVGEEKI---PKLVQRLAF 408 (413)
T ss_dssp SSCEEEECS---------------CHHHHH-HHHHHTTEECEEC--------SSEEEECTTTSCGGGH---HHHHHHHHH
T ss_pred eEEEEeCCC---------------CHHHHH-HHHHhCCEEEecC--------CCceEEEEeeCCHHHH---HHHHHHHHH
Confidence 999997542 234444 4567899999996 238999997 677776 999999988
Q ss_pred HHHH
Q 009517 526 NFMD 529 (533)
Q Consensus 526 ~~~~ 529 (533)
++.+
T Consensus 409 ~~~~ 412 (413)
T 3t18_A 409 YTNK 412 (413)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8754
No 26
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=6.6e-47 Score=391.42 Aligned_cols=368 Identities=15% Similarity=0.213 Sum_probs=298.8
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|+|++ +. |+.+++++.+++... ....|++..|..+||+++++
T Consensus 25 ~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~la~ 72 (410)
T 3e2y_A 25 VVNLGQGFPDI----------------------SP-------PSYVKEELSKAAFID---NMNQYTRGFGHPALVKALSC 72 (410)
T ss_dssp SEECSSCCCCS----------------------CC-------CHHHHHHHHHHHTCG---GGGSCCCTTCCHHHHHHHHH
T ss_pred eEEecCCCCCC----------------------CC-------CHHHHHHHHHHHhCc---cccCCCCCCChHHHHHHHHH
Confidence 89999999875 22 788999998888752 25689999999999999999
Q ss_pred HHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCC---------CC
Q 009517 179 GIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE---------AT 248 (533)
Q Consensus 179 ~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~---------~~ 248 (533)
++++.+|.++++ ++|++|+|+++++..+++.++ ++||+|+++.|+|+.+...+...|.+++.++++. ..
T Consensus 73 ~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 151 (410)
T 3e2y_A 73 LYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLV-DPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSS 151 (410)
T ss_dssp HHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGG
T ss_pred HHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccccccccc
Confidence 999999988888 899999999999999999998 8999999999999999999999999999999873 24
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHH
Q 009517 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~ 328 (533)
+|.+|++++++++++ ++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++. ...++..
T Consensus 152 ~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~ 224 (410)
T 3e2y_A 152 DWTFDPRELESKFSS------KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH-THVKIAT 224 (410)
T ss_dssp GEECCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGG
T ss_pred CCcCCHHHHHhhcCC------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC-CCCCHHH
Confidence 567899999998865 799999999999999999999999999999999999999999999998764 3344433
Q ss_pred HHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChh
Q 009517 329 VSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDES 407 (533)
Q Consensus 329 ~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~ 407 (533)
+. ....+++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++.|.++..+|++... .
T Consensus 225 ~~------~~~~~~i~~~S~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~ 291 (410)
T 3e2y_A 225 LP------GMWERTITIGSAGKTF-SVTGWKLGWSIG---PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIK---R 291 (410)
T ss_dssp ST------TCGGGEEEEEEHHHHS-SCGGGCCEEEEC---CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHT---T
T ss_pred cC------CccCeEEEEecchhhc-CCCCceEEEEEE---CHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhc---c
Confidence 31 1224689999999999 889999999998 9999999887765 5788899999999888752000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCC-CHHHHHHHHhcCCCChHHHHHHHHHccceE
Q 009517 408 YESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL-PEKAIKAAEAEKTVPDAFYCRRLLNATGIV 486 (533)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~ 486 (533)
+..+.+++++++++++++++++.+.|+++ |+.+..|++++|+|+++.. +... +. ...+..++..++..+++++||.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ll~~~gv~ 368 (410)
T 3e2y_A 292 MDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADVSSLGADL-SD-MNSDEPYDYKFVKWMTKHKKLT 368 (410)
T ss_dssp TTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECGGGCCCC-TT-CCSSCCHHHHHHHHHHHHHSEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEchhhhccc-cc-ccccccCHHHHHHHHHHHcCEE
Confidence 00012446778888999999999999998 9999999999999977641 1100 00 0000011346667788889999
Q ss_pred EEcCCCCCCCC----CCceEEEEecCCcCcHHHHHHHHHH
Q 009517 487 LVPGSGFGQVP----GTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 487 v~pg~~f~~~~----g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
+.||+.|+... +.++|||+++.++++|++++++|++
T Consensus 369 v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 369 AIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp CEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred EeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence 99999996421 3469999999999999999999875
No 27
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=5.5e-46 Score=385.73 Aligned_cols=383 Identities=16% Similarity=0.201 Sum_probs=297.8
Q ss_pred ccccccchHHHHHHHHHH--hhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHH
Q 009517 69 EYAVRGEIVSIAQRLQQE--LQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIE 146 (533)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~ 146 (533)
.++++..+..++.+.... +.+ +|+|++|.|...+. +...|+.+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~g~~~---------~i~l~~g~~~~~~~------------------------~~~~~~~v~~ 63 (418)
T 3rq1_A 17 LKDVIFVTAGQAQADAKENGREN---------VVNGTLGAIHDEEG------------------------NLVFLKTVKE 63 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHCGGG---------CEECCSSCCBCTTS------------------------CBCCCHHHHH
T ss_pred CCchHHHHHHHHHhhhhhhcCCC---------eEECCCCcccCCCC------------------------CccccHHHHH
Confidence 344444566666666665 555 99999999843111 1112566666
Q ss_pred HHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc
Q 009517 147 RAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP 226 (533)
Q Consensus 147 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~ 226 (533)
++.+.... ....|++..|..+||+++++++.+.++.+ .+++|++|+|+++|+..+++.++ ++||+|++++|+|.
T Consensus 64 a~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~p~~~ 137 (418)
T 3rq1_A 64 EYLSLSDS----EHVGYAPIAGIPDFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYT-EPGDEVLTADWYWG 137 (418)
T ss_dssp HHHTCCHH----HHHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHS-CTTCEEEEESSCCT
T ss_pred HHHHhccc----ccCCCCCCCChHHHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhc-CCCCEEEECCCCch
Confidence 65443332 25679999999999999999998766533 13499999999999999999998 89999999999999
Q ss_pred chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee-EEEEeCC-CCCCccCCCHHHHHHHHHHHH----
Q 009517 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR-ALVVINP-GNPTGQVLAEENQRAIVDFCK---- 300 (533)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~-~iil~~p-~NPtG~~~s~~~l~~i~~l~~---- 300 (533)
+|...+...|++++.++++++ +|++|++.|++++++.... +++ ++++++| |||||.+++.+++++|+++|+
T Consensus 138 ~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~ 214 (418)
T 3rq1_A 138 AYRVICSDTGRTLVTYSLFDE-HNNFNHEAFQNRVNELAAK--QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVA 214 (418)
T ss_dssp HHHHHHHHTTCEEEEECSBCT-TSSBCHHHHHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCEEEEEeeeCC-CCCcCHHHHHHHHHHhhcc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999755 4899999999999863111 344 7888899 999999999999999999999
Q ss_pred --HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH
Q 009517 301 --KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (533)
Q Consensus 301 --~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~ 378 (533)
+||+++|+||+|.+|.+++. ...++.....++ .++..+|++.||||++ |++|+|+||+++...++++++.+..
T Consensus 215 ~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~---~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~ 289 (418)
T 3rq1_A 215 IGRNNVIIGIDVAYLDYSGEKD-EVRAFFNKFSHL---PKEILTCVCYSLSKGF-TMYGQRVGAMIGISDDEEIADEFFE 289 (418)
T ss_dssp TSSCEEEEEEECTTGGGSSCHH-HHHGGGGGGTTC---CTTEEEEEEEESTTTT-TCCSSCCEEEEEEESSHHHHHHHHH
T ss_pred ccCCCeEEEEecccccccCChH-HHHHHHHHHHhc---CCCceEEEEEeCCCCC-cCcCCcceEEEEEeCCHHHHHHHHH
Confidence 89999999999999887542 112222222222 2343468999999999 8999999999864347889988877
Q ss_pred hhh-----ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 379 VAS-----VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 379 ~~~-----~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
... ..++++.++|.++..+|++. ..++.|.++++.++++++++++++.+.|+++ |+.++.++++||+|++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 364 (418)
T 3rq1_A 290 VNKSTSRATWSNICRPAMRTMANIVADP----AKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGFFITIP 364 (418)
T ss_dssp HHHHHHHHHTSSCCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSSEEEEE
T ss_pred HHHHHHhhccCCCchHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceEEEEcC
Confidence 643 22468899999999998752 2334566777788899999999999999998 9999999999999965
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~ 527 (533)
+. +...++ +.|.++||.+.||. ++||||++ .++++|++++++|+++++++
T Consensus 365 ~~---------------~~~~~~-~~l~~~gi~v~~g~--------~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 365 TD---------------SANAIC-EELKKEHIYVIALA--------NGIRIAACGIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp CT---------------THHHHH-HHHHHTTEECEECS--------SEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred CC---------------CHHHHH-HHHHhCCEEEecCC--------CCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 43 233444 45678999999962 28999997 79999999999999998765
No 28
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.7e-45 Score=375.71 Aligned_cols=366 Identities=24% Similarity=0.378 Sum_probs=303.9
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..++++++..+...+.+....+++ +|+|+.|.|.. +. |
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~~~~~~----------------------~~-------~ 44 (370)
T 2z61_A 3 SKRLLNFESFEVMDILALAQKLESEGKK---------VIHLEIGEPDF----------------------NT-------P 44 (370)
T ss_dssp CHHHHHCCCCTTHHHHHHHHHHHHTTCC---------CEECCCCSCSS----------------------CC-------C
T ss_pred hhhhhhccccHHHHHHHHHHHHHhcCCC---------EEEccCCCCCC----------------------CC-------C
Confidence 4566777888888888888777765555 99999999863 21 6
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
+.+++++.+.+.. ....|++..|..+||++++++++..+|.++++++|++|+|+++++..+++.++ ++||+|+++
T Consensus 45 ~~v~~a~~~~~~~----~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~ 119 (370)
T 2z61_A 45 KPIVDEGIKSLKE----GKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSII-DDGDEVLIQ 119 (370)
T ss_dssp HHHHHHHHHHHHT----TCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEE
T ss_pred HHHHHHHHHHHHc----CccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhc-CCCCEEEEe
Confidence 8889988888875 24579988899999999999999988988889999999999999999999998 899999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~ 301 (533)
+|+|+++...++..|.+++.++ +|+++|++++++ ++++|++++|+||||.+++.+ |+++|++
T Consensus 120 ~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~----l~~~~~~ 181 (370)
T 2z61_A 120 NPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEALSD------KTKAIIINSPSNPLGEVIDRE----IYEFAYE 181 (370)
T ss_dssp SSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHCCS------SEEEEEEESSCTTTCCCCCHH----HHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhccc------CceEEEEcCCCCCcCcccCHH----HHHHHHH
Confidence 9999999999999999999887 589999998865 789999999999999999966 9999999
Q ss_pred cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh
Q 009517 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (533)
Q Consensus 302 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~ 381 (533)
||+++|+||+|.++.+++. ..++..+ . ....+++++.||||.+ |++|+|+||+++ ++++++.+.....
T Consensus 182 ~~~~li~De~~~~~~~~g~--~~~~~~~-~-----~~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~ 249 (370)
T 2z61_A 182 NIPYIISDEIYNGLVYEGK--CYSAIEF-D-----ENLEKTILINGFSKLY-AMTGWRIGYVIS---NDEIIEAILKLQQ 249 (370)
T ss_dssp HCSEEEEECTTTTCBSSSC--CCCGGGT-C-----TTCSSEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHHHH
T ss_pred cCCEEEEEcchhhcccCCC--CcCHHHc-c-----CCCCcEEEEecChhcc-CCccceEEEEEE---CHHHHHHHHHHHh
Confidence 9999999999999888652 2333332 0 1123579999999999 789999999998 8899999887765
Q ss_pred -ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 382 -VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 382 -~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
.++++++++|.++..+|+. . ..+++++++++++++++++.+.|+++ |+.++.+++++|+|++++.
T Consensus 250 ~~~~~~~~~~~~a~~~~l~~-------~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~---- 315 (370)
T 2z61_A 250 NLFISAPTISQYAALKAFEK-------E--TEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGAYYVFPNIGE---- 315 (370)
T ss_dssp HHTSSSCHHHHHHHGGGGSH-------H--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCBTTEECCBCSS----
T ss_pred hcccCCCHHHHHHHHHHHhc-------c--CHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCcceEEEEecCC----
Confidence 5578899999998888751 0 13456778889999999999999998 8888889999999976541
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+...++..+++++||.+.||..|+. .+.+++||+++.++++|++++++|+++++
T Consensus 316 ----------~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 316 ----------DGREFAYKLLKEKFVALTPGIGFGS-KGKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp ----------CHHHHHHHHHHHHCEECEEGGGGCG-GGSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred ----------CHHHHHHHHHHhCCEEEeCchhhCC-CCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 2344555666578999999999873 33459999999888999999999998764
No 29
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-46 Score=382.39 Aligned_cols=367 Identities=17% Similarity=0.194 Sum_probs=297.0
Q ss_pred CccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHH
Q 009517 68 CEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIER 147 (533)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~ 147 (533)
++++++..+....+++...| + +|||+.|.+.. +. |+.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g-~---------~i~l~~~~~~~----------------------~~-------~~~v~~a 44 (376)
T 3ezs_A 4 FEPYPFERLRALLKEITPKK-R---------GLDLGIGEPQF----------------------ET-------PKFIQDA 44 (376)
T ss_dssp CCCCHHHHHHHHHTTCCCSS-C---------CCBCSSCCCCS----------------------CC-------CHHHHHH
T ss_pred CCcchHHHHHHHHHhhhccC-C---------EEEeCCCCCCC----------------------CC-------CHHHHHH
Confidence 34555555555544443333 3 99999999764 22 7888888
Q ss_pred HHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC--CCeEEEcCCcC
Q 009517 148 AWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE--NDGILCPIPQY 225 (533)
Q Consensus 148 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~--gd~Vlv~~p~~ 225 (533)
+.+.+. ....|++..|..+||+++++++.+.+|.++++++|++|+|+++++..+++.++ ++ ||+|+++.|+|
T Consensus 45 ~~~~~~-----~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~-~~~~gd~vl~~~p~~ 118 (376)
T 3ezs_A 45 LKNHTH-----SLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVL-FDYQNPTIAYPNPFY 118 (376)
T ss_dssp HHTTGG-----GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT-TTCSSCEEEEEESCC
T ss_pred HHHhhh-----hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc-CCCCCCEEEEecCCc
Confidence 887773 26789999999999999999999988987789999999999999999999998 78 99999999999
Q ss_pred cchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 009517 226 PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (533)
Q Consensus 226 ~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~ 305 (533)
+++...++..|.+++.++++++.++.+ ++++++.+ ++++|++++||||||.+++.+++++|+++|++||++
T Consensus 119 ~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 189 (376)
T 3ezs_A 119 QIYEGAAKFIKAKSLLMPLTKENDFTP---SLNEKELQ------EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFI 189 (376)
T ss_dssp THHHHHHHHTTCEEEEEECCGGGTSCC---CCCHHHHH------HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HhHHHHHHHcCCEEEEcccCCCCCcch---hHHhhhcc------CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcE
Confidence 999999999999999999987654443 67777776 689999999999999999999999999999999999
Q ss_pred EEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccc
Q 009517 306 LLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNL 384 (533)
Q Consensus 306 lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~ 384 (533)
+|+||+|.++.+++ ...++......+.. +...+++++.||||++ |++|+|+||+++ ++++++.+..... .++
T Consensus 190 li~De~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~ 262 (376)
T 3ezs_A 190 LINDECYSEIYENT--PPPSLLEACMLAGN-EAFKNVLVIHSLSKRS-SAPGLRSGFIAG---DSRLLEKYKAFRAYLGY 262 (376)
T ss_dssp EEEECTTTTCBSSS--CCCCHHHHHHHTTC-TTCTTEEEEEESTTTT-TCGGGCCEEEEE---CHHHHHHHHHHHTTTCC
T ss_pred EEEEccchhhccCC--CCCCHHHccccccc-cccCcEEEEecchhcc-CCccceeEEEee---CHHHHHHHHHHHhhhcC
Confidence 99999999998866 24444443221100 0223578999999999 889999999998 9999999988765 567
Q ss_pred cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHH
Q 009517 385 CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAA 464 (533)
Q Consensus 385 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~ 464 (533)
++++++|.++..+|+.. +++++++++++++++.+.+.|+ ++. .+.+++|+|++++
T Consensus 263 ~~~~~~~~a~~~~l~~~-----------~~~~~~~~~~~~~~~~l~~~l~---~~~--~~~~~~~~~~~~~--------- 317 (376)
T 3ezs_A 263 TSANAIQKASEAAWLDD-----------RHAEFFRNIYANNLKLARKIFK---NTL--IYPYSFYVYLPVQ--------- 317 (376)
T ss_dssp CCCHHHHHHHHHHHHCS-----------HHHHHHHHHHHHHHHHHHHHST---TCC--CCSBSSEEEEECS---------
T ss_pred CCChHHHHHHHHHHhCc-----------HHHHHHHHHHHHHHHHHHHHhc---CCC--CCCcceEEEEECC---------
Confidence 88999999999888642 3457788889999999999987 554 7788999997654
Q ss_pred HhcCCCChHHHHHHHHHccceEEEcCCCCCC-CCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 465 EAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-VPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 465 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+...++..+++++||.+.||..|+. ..+.++|||+++.++++|++++++|++++++
T Consensus 318 ------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 318 ------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp ------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC
T ss_pred ------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 1344555666658999999999974 2345699999988999999999999998764
No 30
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=4.2e-45 Score=377.60 Aligned_cols=393 Identities=20% Similarity=0.321 Sum_probs=307.7
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..+.++++..+...+.++...|++ +|||+.|.|+..+ . .+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~idl~~g~~~~~~---------------------~------~~ 51 (407)
T 2zc0_A 8 AGRANWIKGSALADVMKKASELQKKGVK---------LISLAAGDPDPEL---------------------I------PR 51 (407)
T ss_dssp CGGGGGCCCCHHHHHHHHHHHHHHSSCC---------CEECCSCCCCTTT---------------------S------CH
T ss_pred hhhhccCCchHHHHHHHhhhcccCCCCc---------eEeCCCCCCCchh---------------------C------CH
Confidence 4455566666666666666544332334 8999999987411 0 14
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
+.+.+++.+++.+... ... |++..|..+||+++++++.+.+|.++++++|++|+|+++|+..+++.++ ++||+|+++
T Consensus 52 ~~v~~a~~~~~~~~~~-~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~-~~gd~vl~~ 128 (407)
T 2zc0_A 52 AVLGEIAKEVLEKEPK-SVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLI-DPGDVVITE 128 (407)
T ss_dssp HHHHHHHHHHHHHCGG-GGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEE
T ss_pred HHHHHHHHHHHhhccc-ccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhc-CCCCEEEEe
Confidence 6777888888765321 245 9988899999999999998888877888999999999999999999998 799999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-EeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~ii-l~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
.|+|+++...++..|++++.++++++ ++|+++|+++++.....+.++++|+ +++|+||||.+++.+++++|+++|+
T Consensus 129 ~p~~~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~ 205 (407)
T 2zc0_A 129 NPSYINTLLAFEQLGAKIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIAS 205 (407)
T ss_dssp ESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHcCCEEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 99999999999999999999998753 5899999999983222233688875 6699999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|.++.+++. +..++..+ ++..+++++.||||++ | +|+|+||+++ ++++++.+....
T Consensus 206 ~~~~~li~De~~~~~~~~~~-~~~~~~~~-------~~~~~~i~~~s~sK~~-~-~G~r~G~~~~---~~~~~~~~~~~~ 272 (407)
T 2zc0_A 206 KYDLLIIEDTAYNFMRYEGG-DIVPLKAL-------DNEGRVIVAGTLSKVL-G-TGFRIGWIIA---EGEILKKVLMQK 272 (407)
T ss_dssp HHTCEEEEECTTTTSBSSCS-SCCCGGGG-------CSSCCEEEEEESTTTT-C-TTSCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEECCCcccccCCC-CCCChhhc-------CCCCCEEEEccccccc-C-CCcceEEEec---CHHHHHHHHHHH
Confidence 99999999999999888653 33344333 2333679999999999 7 8999999998 899999888766
Q ss_pred h-ccccCChHHHHHHHHHcCCCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccCCC
Q 009517 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYC-AERDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQLP 457 (533)
Q Consensus 381 ~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~~~ 457 (533)
. .+++++++.|.++..+|+.. .+. +++++++++++++++++.+.|++ ++++.++.|.+++|+|++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-- 342 (407)
T 2zc0_A 273 QPIDFCAPAISQYIALEYLKRG--------YFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLP-- 342 (407)
T ss_dssp TTTTSSSCHHHHHHHHHHHHTT--------HHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECS--
T ss_pred HhhcCCCCHHHHHHHHHHHHcC--------CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcC--
Confidence 5 55677999999998888632 122 44567788889999999999987 57888888889999997654
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-CCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 458 EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-PGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.+ . +...++..+++++||.+.||..|+.. .+.++|||+++ .+++++++++++|+++++++..
T Consensus 343 ~~---------~-~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 343 EG---------A-DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp TT---------C-CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHHC-
T ss_pred CC---------C-CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 11 1 23455556655559999999988642 23459999998 4789999999999999887643
No 31
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-46 Score=385.94 Aligned_cols=358 Identities=21% Similarity=0.316 Sum_probs=294.8
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|.. +. |+.+.+++.+++.+ ....|++..|..+||+++++
T Consensus 27 ~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~----~~~~y~~~~g~~~l~~~la~ 73 (411)
T 2o0r_A 27 AVNLGQGFPDE----------------------DG-------PPKMLQAAQDAIAG----GVNQYPPGPGSAPLRRAIAA 73 (411)
T ss_dssp CEESSCSSCSS----------------------CC-------CHHHHHHHHHHHHT----TCCSCCCTTCCHHHHHHHHH
T ss_pred eeeccCcCCCC----------------------CC-------CHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHH
Confidence 89999998864 21 68899999888875 24579998899999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCC-CCCCCCHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETSE 256 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~ld~~~ 256 (533)
++.+.+|.+++++ +|++|+|+++|+..+++.++ ++||+|+++.|+|+++...+...|.+++.++++.+ .+|.+|+++
T Consensus 74 ~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~-~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~ 152 (411)
T 2o0r_A 74 QRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLV-EPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADA 152 (411)
T ss_dssp HHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHH
T ss_pred HHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHH
Confidence 9998889888888 99999999999999999998 89999999999999999999999999999998753 356799999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
|++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+.
T Consensus 153 l~~~l~~------~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~------ 219 (411)
T 2o0r_A 153 LRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA-RHLPLAGFD------ 219 (411)
T ss_dssp HHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGST------
T ss_pred HHHhhcc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCcChhhcc------
Confidence 9999875 799999999999999999999999999999999999999999999988653 233433321
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 415 (533)
.....++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++.|.++..+|+.. .+++
T Consensus 220 ~~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----------~~~~ 285 (411)
T 2o0r_A 220 GMAERTITISSAAKMF-NCTGWKIGWACG---PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE----------DAWV 285 (411)
T ss_dssp TTGGGEEEEEEHHHHT-TCTTTCEEEEEC---CHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC----------HHHH
T ss_pred CCCCCEEEEeechhhc-CCccceEEEEee---CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC----------hHHH
Confidence 1123578999999998 789999999998 8999998877654 56777888888888887421 2446
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 416 DGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 416 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
++++++++++++++.+.|+++ |+.+..+++++|+|++++ .. +..+...++..+++++||.+.||..|..
T Consensus 286 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~--~~--------~~~~~~~~~~~l~~~~gi~v~~g~~f~~ 354 (411)
T 2o0r_A 286 AALRNSLRARRDRLAAGLTEI-GFAVHDSYGTYFLCADPR--PL--------GYDDSTEFCAALPEKVGVAAIPMSAFCD 354 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCEECCCCBSSEEEEECG--GG--------TCCCHHHHHHHHHHHHSEECEEGGGGSC
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCEecCCCeeEEEEEecC--CC--------CCCCHHHHHHHHHHhCCEEEcChhhhCC
Confidence 778888999999999999988 899988999999997654 10 0012445566677778999999998842
Q ss_pred CC----------CCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 496 VP----------GTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 496 ~~----------g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.. +.++|||+++.++++|++++++|++++++..
T Consensus 355 ~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 355 PAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp CC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC---
T ss_pred CccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhccC
Confidence 22 4569999999888899999999999877654
No 32
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1e-45 Score=379.75 Aligned_cols=356 Identities=18% Similarity=0.209 Sum_probs=297.7
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|||+.|+|.. +. |+.+++++.+++.+ ....|++. ..++++++++
T Consensus 29 ~i~~~~~~~~~----------------------~~-------~~~v~~a~~~~~~~----~~~~y~~~--~~~l~~~la~ 73 (391)
T 3dzz_A 29 ELPMWIAEMDF----------------------KI-------APEIMASMEEKLKV----AAFGYESV--PAEYYKAVAD 73 (391)
T ss_dssp CEECCSSCCSS----------------------CC-------CHHHHHHHHHHHTT----CCCCCBCC--CHHHHHHHHH
T ss_pred ceeccccCCCC----------------------CC-------CHHHHHHHHHHHhc----CcCCCCCC--CHHHHHHHHH
Confidence 99999998875 22 78999999998876 35678776 6899999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecC-CCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~ld~~~l 257 (533)
++.+.+|.++++++|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|.+++.++++ .+++|.+|+++|
T Consensus 74 ~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 152 (391)
T 3dzz_A 74 WEEIEHRARPKEDWCVFASGVVPAISAMVRQFT-SPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADL 152 (391)
T ss_dssp HHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHH
T ss_pred HHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC-CCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHH
Confidence 999999988889999999999999999999998 899999999999999999999999999999986 344567999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++. ++++|++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+.+. ...++..+... .
T Consensus 153 ~~~l~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~----~ 222 (391)
T 3dzz_A 153 EEKLATP-----SVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE-DITPAFTVDWD----A 222 (391)
T ss_dssp HHHHTST-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCCGGGSCTT----T
T ss_pred HHHHhcc-----CceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC-CceehhhcCcc----c
Confidence 9999732 799999999999999999999999999999999999999999999988663 33444333111 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 414 (533)
+ .+++++.||||.+ |++|+|+||+++ + +++++.+..... .+++++++++.++..+|... .++
T Consensus 223 ~-d~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----------~~~ 287 (391)
T 3dzz_A 223 K-NWVVSLISPSKTF-NLAALHAACAII---PNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG----------HDW 287 (391)
T ss_dssp G-GGEEEEECSHHHH-TCTTTCCEEEEC---CSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC----------HHH
T ss_pred c-CcEEEEEeChhhc-cccchhheEEEE---CCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc----------HHH
Confidence 2 3689999999999 889999999997 6 899998887653 45688999998888877421 244
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC
Q 009517 415 RDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
+++++++++++++++.+.|++ +||+.+..+.+++++|++++.. +. +...++..+++++||.+.||..|
T Consensus 288 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~l~~~~gi~v~~g~~~ 356 (391)
T 3dzz_A 288 LRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISAL----------GM-NAEDFCKYLREKTGLIISAGNGY 356 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGG----------CS-CHHHHHHHHHHHHCEECEESGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhc----------CC-CHHHHHHHHHHhCCEEEeCchhh
Confidence 677888899999999999998 7999999999999999765411 11 24455566666899999999999
Q ss_pred CCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 494 ~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+ ..+.+++||+++.++++|++++++|+++++++
T Consensus 357 ~-~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 357 R-GNGHEFVRINLACPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp C-TTGGGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred C-CCCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 8 34566999999988899999999999988754
No 33
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-45 Score=376.19 Aligned_cols=351 Identities=22% Similarity=0.319 Sum_probs=292.1
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|+. +. |+.+.+++.+.+.. ....|++..|..+||+++++
T Consensus 32 ~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~----~~~~y~~~~g~~~l~~~la~ 78 (386)
T 1u08_A 32 AINLSQGFPDF----------------------DG-------PRYLQERLAHHVAQ----GANQYAPMTGVQALREAIAQ 78 (386)
T ss_dssp CEECCCSSCSS----------------------CC-------CHHHHHHHHHHHHT----TCCSCCCTTCCHHHHHHHHH
T ss_pred eEEecCCCCCC----------------------CC-------CHHHHHHHHHHHHh----hccCCCCCCCCHHHHHHHHH
Confidence 89999999864 21 68889998888865 24579988899999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++.+.+|.+++++ +|++|+|+++++..+++.++ ++||+|++++|+|+++...++..|.+++.++++.+ +|++|+++|
T Consensus 79 ~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l 156 (386)
T 1u08_A 79 KTERLYGYQPDADSDITVTAGATEALYAAITALV-RNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEF 156 (386)
T ss_dssp HHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHH
T ss_pred HHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhC-CCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHH
Confidence 9998888888888 99999999999999999998 79999999999999999999999999999998754 578999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++ ++++|++++|+||||.++|.+++++|+++|++||+++|+||+|.++.|++. ...++..+...
T Consensus 157 ~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~----- 224 (386)
T 1u08_A 157 AALLSE------RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQ-GHASVLAHPQL----- 224 (386)
T ss_dssp HHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSS-CCCCGGGSHHH-----
T ss_pred HHhhcc------cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCC-CCcChhcccCc-----
Confidence 999865 799999999999999999999999999999999999999999999988653 23344332111
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
...++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++.|.++..+|+.. .++++
T Consensus 225 -~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----------~~~~~ 289 (386)
T 1u08_A 225 -RERAVAVSSFGKTY-HMTGWKVGYCVA---PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE----------PEHYL 289 (386)
T ss_dssp -HTTEEEEEEHHHHT-TCGGGCCEEEEC---CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC----------THHHH
T ss_pred -cCcEEEEecchhhc-CCcccceEEEEc---CHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC----------cHHHH
Confidence 12468899999999 789999999998 8999998887664 56788889998888887521 24467
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
+++++++++++++.+.|+++ |+.+..+++++|+|++++.. +..+...++..+++++||.+.||..|+..
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~l~~~~gi~v~~g~~f~~~ 358 (386)
T 1u08_A 290 ALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLVDYSAV----------STLDDVEFCQWLTQEHGVAAIPLSVFCAD 358 (386)
T ss_dssp THHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEEECTTT----------CCSCHHHHHHHHHHHSCEECEEGGGGCSS
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeecCCCceEEEEEecCCC----------CCCCHHHHHHHHHHhCCEEEeCchHhCCC
Confidence 78889999999999999998 89998899999999766411 00124455666777889999999988632
Q ss_pred -CCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 497 -PGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 497 -~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
.+.++|||+++.++++|++++++|++
T Consensus 359 ~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 359 PFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp CCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 24559999999888899999998864
No 34
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=5.8e-46 Score=383.39 Aligned_cols=382 Identities=15% Similarity=0.167 Sum_probs=296.4
Q ss_pred cccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCC-cCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNP-QSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
+..++..+..+++..+..+...+. +++|+|++|.| +..+. | .+.+.
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~--------~~~i~l~~g~~~d~~~~-~------------------------~~~~~ 50 (401)
T 7aat_A 4 WSHVEMGPPDPILGVTEAFKRDTN--------SKKMNLGVGAYRDDNGK-P------------------------YVLNC 50 (401)
T ss_dssp STTCCCCCCCHHHHHHHHHHHCCC--------TTCEECCCCSCCCTTSC-C------------------------CCCHH
T ss_pred hhcCCCCCCChhHHHHHHHhhCCC--------CCceeeeeeeEECCCCC-E------------------------echHH
Confidence 445555666667788877776432 23899999998 53111 1 11346
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHhc--cCCCCeEE
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLI--RSENDGIL 219 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~--~~~gd~Vl 219 (533)
+.+++.+.+... ....|++..|.++||+++++++.+.+|..+++++|++ |+|+++++..+++.+. .++||+|+
T Consensus 51 v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vl 127 (401)
T 7aat_A 51 VRKAEAMIAAKK---MDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVY 127 (401)
T ss_dssp HHHHHHHHHHTT---CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHhcccc---cccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEE
Confidence 666666655531 3678999999999999999999988887777999977 9999999998876652 16899999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
+++|+|.+|...++..|.+++.++++.+.++++|++.+++.+++. .+++++|++++||||||.+++.+++++|+++|
T Consensus 128 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~ 204 (401)
T 7aat_A 128 LPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVV 204 (401)
T ss_dssp EEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHH
T ss_pred EcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999876567899999998888652 23788999999999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCC-CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH----HHH
Q 009517 300 KKEGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VRE 374 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~----~~~ 374 (533)
++||+++|+||+|+++.+++.. ...++..+. + ...++|++.||||+| |++|+|+||+++...+++ ++.
T Consensus 205 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~-----~~~~~i~~~S~sK~~-~~~G~RiG~l~~~~~~~~~~~~~~~ 277 (401)
T 7aat_A 205 KKRNLLAYFDMAYQGFASGDINRDAWALRHFI-E-----QGIDVVLSQSYAKNM-GLYGERAGAFTVICRDAEEAKRVES 277 (401)
T ss_dssp HHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-H-----TTCCCEEEEECTTTS-CCGGGCEEEEEEECSSHHHHHHHHH
T ss_pred HhCCcEEEEccccccccCCCccccHHHHHHHH-h-----cCCcEEEEecCCccc-ccccCceEEEEEEeCCHHHHHHHHH
Confidence 9999999999999998885421 122232221 2 223579999999999 899999999987544666 455
Q ss_pred HHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEecCCceeEE
Q 009517 375 QIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNKAEGAMYL 450 (533)
Q Consensus 375 ~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~gg~~~ 450 (533)
.+..... .+.+++..+|.++..+++++ .....|.+++++++++++++++++.+.|+++ +++.+..|+++||+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~ 353 (401)
T 7aat_A 278 QLKILIRPMYSNPPMNGARIASLILNTP----ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFC 353 (401)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEE
T ss_pred HHHHHHHhccCCCChHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEE
Confidence 5555544 55677788888888777642 2334456778889999999999999999987 24778889999999
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l 524 (533)
|++++ ..++..+++++||++.|+ +|||++ .++++|++++++|++++
T Consensus 354 ~~~~~-----------------~~~~~~ll~~~gi~v~~~-----------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 354 FTGLK-----------------PEQVERLTKEFSIYMTKD-----------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp ECCCC-----------------HHHHHHHHHHHCEECCTT-----------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ecCCC-----------------HHHHHHHHHhCCEeccCC-----------CeEEeccCChhhHHHHHHHHHHHh
Confidence 96543 122457778899999863 599997 77788999999999876
No 35
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.1e-45 Score=384.67 Aligned_cols=370 Identities=15% Similarity=0.231 Sum_probs=297.4
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|||+.|.|+. +. |+.+++++.+++..... ....|++..|..+||+++++
T Consensus 39 ~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~l~~~la~ 88 (429)
T 1yiz_A 39 PLNLGQGFPDY----------------------HA-------PKYALNALAAAANSPDP-LANQYTRGFGHPRLVQALSK 88 (429)
T ss_dssp CEECCSSSCSS----------------------CC-------CHHHHHHHHHHHTCSCG-GGGSCCCSSCCHHHHHHHHH
T ss_pred EEEecCCCCCC----------------------CC-------CHHHHHHHHHHHhcccc-CccCCCCCCCcHHHHHHHHH
Confidence 89999999864 21 68899998888865321 24679988899999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC--------C
Q 009517 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT--------G 249 (533)
Q Consensus 179 ~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~--------~ 249 (533)
++.+.+|.+++++ +|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|.+++.++++.+. +
T Consensus 89 ~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 167 (429)
T 1yiz_A 89 LYSQLVDRTINPMTEVLVTVGAYEALYATIQGHV-DEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSAD 167 (429)
T ss_dssp HHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGG
T ss_pred HHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccC
Confidence 9998888878888 99999999999999999998 799999999999999999999999999999988653 5
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHH
Q 009517 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (533)
Q Consensus 250 ~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~ 329 (533)
|++|++.|++++++ ++++|++++|+||||.++|++++++|+++|++||+++|+||+|.++.|++. ...++..+
T Consensus 168 ~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~ 240 (429)
T 1yiz_A 168 WVLDNNELEALFNE------KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPF-EHIRICTL 240 (429)
T ss_dssp CBCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTS-CCCCGGGS
T ss_pred cccCHHHHHHHhcc------CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCC-CCcChhhc
Confidence 78999999999865 799999999999999999999999999999999999999999999988653 33343332
Q ss_pred HhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCC-----CCC
Q 009517 330 SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP-----PKV 403 (533)
Q Consensus 330 ~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~-----~~~ 403 (533)
. .....++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++.|.++..+|+. ..
T Consensus 241 -~-----~~~~~~~~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~- 309 (429)
T 1yiz_A 241 -P-----GMWERTITIGSAGKTF-SLTGWKIGWAYG---PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKS- 309 (429)
T ss_dssp -T-----TTGGGEEEEEEHHHHH-TCGGGCCEEEES---CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTS-
T ss_pred -c-----CCcCceEEEecchhcc-CCCCcceEEEEe---CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccc-
Confidence 1 1223578999999998 789999999998 8999998887654 5688899999998888853 21
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHcc
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNAT 483 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 483 (533)
+.+++++++++++++++++.+.|+++ |+.++.+++|+|+|++++......+.....+..+...++..+++++
T Consensus 310 -------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 381 (429)
T 1yiz_A 310 -------PECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSV 381 (429)
T ss_dssp -------TTSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHT
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhC
Confidence 12346778888999999999999988 8998889999999977652100000000000012345566677789
Q ss_pred ceEEEcCCCCCCCC----CCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 484 GIVLVPGSGFGQVP----GTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 484 gV~v~pg~~f~~~~----g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
||.+.||..|+... +.++|||+++.++++|++++++|+++++
T Consensus 382 gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 382 GLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKG 427 (429)
T ss_dssp SEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSC
T ss_pred CEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhcc
Confidence 99999998886321 2459999999889999999999998764
No 36
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-45 Score=380.36 Aligned_cols=382 Identities=25% Similarity=0.351 Sum_probs=314.6
Q ss_pred ccCcCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCccccc
Q 009517 58 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQ 137 (533)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~ 137 (533)
+.-.++++...+++++..+...+.+....|++ +|+|+.|.|.. +.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~~~~~~----------------------~~---- 57 (409)
T 2gb3_A 13 MDVFSDRVLLTEESPIRKLVPFAEMAKKRGVR---------IHHLNIGQPDL----------------------KT---- 57 (409)
T ss_dssp ---CCHHHHSCCCCTTGGGHHHHHHHHHTTCE---------EEECSSCCCCS----------------------CC----
T ss_pred HHHHHHHhhcCCccHHHHHHHHHHHHHhcCCC---------EEeccCCCCCC----------------------CC----
Confidence 34557788888888888898888888776666 99999999863 21
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 138 GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 138 ~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+++++ +++.. ....|++..|..+||++++++++..+|.++++++|++|+|+++|+..+++.+. ++||+
T Consensus 58 ---~~~v~~a~-~~l~~----~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~ 128 (409)
T 2gb3_A 58 ---PEVFFERI-YENKP----EVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIA-NPGDE 128 (409)
T ss_dssp ---CTHHHHHH-HHTCC----SSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCE
T ss_pred ---CHHHHHHH-HHHhc----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhC-CCCCE
Confidence 67788888 77754 24579988899999999999999988988888999999999999999999998 79999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|+++...++..|.+++.++++++++|.+ +++|++++++ ++++|++++|+||||.+++.+++++|++
T Consensus 129 Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~ 201 (409)
T 2gb3_A 129 ILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINE------RTKGIVLSNPCNPTGVVYGKDEMRYLVE 201 (409)
T ss_dssp EEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCc------CCeEEEECCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999876446666 8888888865 7999999999999999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH-HHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQI 376 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~-~~~~~l 376 (533)
+|++||+++|+||+|.++.+++. ..++ ..++ ...++++.||||.+ |++|+|+||+++ ++ ++++.+
T Consensus 202 ~~~~~~~~li~Dea~~~~~~~~~--~~~~---~~~~-----~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~l~~~l 267 (409)
T 2gb3_A 202 IAERHGLFLIVDEVYSEIVFRGE--FASA---LSIE-----SDKVVVIDSVSKKF-SACGARVGCLIT---RNEELISHA 267 (409)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSC--CCCG---GGSC-----CTTEEEEEESTTTT-TCGGGCCEEEEC---SCHHHHHHH
T ss_pred HHHHcCCEEEEECcccccccCCC--CCCc---cccC-----CCCEEEEecchhcc-CCccceEEEEEE---CcHHHHHHH
Confidence 99999999999999999888652 2332 1221 12468899999999 889999999998 66 899888
Q ss_pred HHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCCceeEEeccc
Q 009517 377 YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC-NKAEGAMYLFPRI 454 (533)
Q Consensus 377 ~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~gg~~~~~~~ 454 (533)
..... .+ +++++.|.++.++|+.. .+++++++++++++++++.+.|+++ |+.+ ..|.+++|+|+++
T Consensus 268 ~~~~~~~~-~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 335 (409)
T 2gb3_A 268 MKLAQGRL-APPLLEQIGSVGLLNLD----------DSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGAFYITAEL 335 (409)
T ss_dssp HHHHHHSC-CCCHHHHHHHHHHHTCC----------HHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEEC
T ss_pred HHHHhccC-CCCHHHHHHHHHHHhcc----------HHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEe
Confidence 77654 44 88999999999888632 2446778888999999999999998 8888 7889999999765
Q ss_pred CCCHHHHHHHHhcCCCChHHHHHHHHHc-----cceEEEcCCCCCCC--CCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 455 QLPEKAIKAAEAEKTVPDAFYCRRLLNA-----TGIVLVPGSGFGQV--PGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gV~v~pg~~f~~~--~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+ . .+...++..++++ +||.+.||..|+.. .+.++|||+++.++++|++++++|+++++++
T Consensus 336 ~-~------------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 336 P-V------------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp S-S------------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred C-C------------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 4 1 1234455566655 59999999988642 2355999999988999999999999999887
Q ss_pred HH
Q 009517 528 MD 529 (533)
Q Consensus 528 ~~ 529 (533)
.+
T Consensus 403 ~~ 404 (409)
T 2gb3_A 403 CS 404 (409)
T ss_dssp HC
T ss_pred hh
Confidence 54
No 37
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=2e-45 Score=384.80 Aligned_cols=385 Identities=14% Similarity=0.131 Sum_probs=298.3
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
.+..+++.+..+++..++++++++.+ .+|||++|.|......|. +.+.
T Consensus 24 ~~~~~~~~~~~~i~~~~~~~~~~~~~--------~~i~l~~g~~~d~~~~~~------------------------v~~a 71 (448)
T 3meb_A 24 VFSGFPASPPDAILNLTVLYNADTNP--------KKVNLGVGAYRDESGKPW------------------------ILPA 71 (448)
T ss_dssp TTTTCCCCCCCTTHHHHHHHHHCCCT--------TCEEESSCCCCCTTSCCC------------------------CCHH
T ss_pred HHhcCCCCCCChHHHHHHHHHhCCCC--------CeEEeecccccCCCCCEe------------------------chHH
Confidence 45667888888899999999885443 379999999943221111 1344
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCC---CCCCCEEE--cCChHHHHHH--HHHHhccCCCC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDIFL--TDGASPAVHM--MMQLLIRSEND 216 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~---~~~~~i~~--t~G~~~al~~--~~~~l~~~~gd 216 (533)
+.+++.+...+... ....|.+..|.++||+++++++. |.+ +++++|++ |+|+++++.+ .+..++ .+||
T Consensus 72 v~~a~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~-~~gd 146 (448)
T 3meb_A 72 VKEAEAIISSDLSK-YNKEYPPVAGFPLFLEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLW-MPKA 146 (448)
T ss_dssp HHHHHHHHHHCTTT-TCCSCCCTTCCHHHHHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHH-CTTC
T ss_pred HHHHHHHHhhcccC-CCCCCCCCcchHHHHHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHh-CCCC
Confidence 55554443311111 36789999999999999999994 433 22689999 9999999988 445556 7999
Q ss_pred eEEEcCCcCcchHHHHH----HhCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 217 GILCPIPQYPLYSASIA----LHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~----~~g~~~~~v~~~~~~-~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
+|++++|+|.+|...++ ..|++++.+++.+.+ +|++|+++|++++++. .++++++++++||||||.+++.++
T Consensus 147 ~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~ 223 (448)
T 3meb_A 147 EFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQ 223 (448)
T ss_dssp CEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHH
T ss_pred EEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHH
Confidence 99999999999999999 999999999995554 6899999999999862 125778888999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCC-CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec---
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG--- 367 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~--- 367 (533)
|++|+++|++||+++|+||+|++|.+++. ....++..+. + ...++|++.||||+| |++|+|+||+..+.
T Consensus 224 l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~-----~~~~~i~~~S~SK~~-g~~G~RiG~l~~v~~~~ 296 (448)
T 3meb_A 224 WKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFV-D-----AGVEVLVAQSFSKNF-GLYGERIGCLHVVHAGV 296 (448)
T ss_dssp HHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHH-H-----TTCCEEEEEECTTTS-CCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHh-h-----cCCcEEEEecccccC-CCccccceeeeeeeccc
Confidence 99999999999999999999999887541 0112333322 1 123579999999999 89999999983221
Q ss_pred -----CCH----HHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Q 009517 368 -----FSA----EVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL- 436 (533)
Q Consensus 368 -----~~~----~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 436 (533)
.++ ++++.+..... .+++++.++|.++..+|+++ ...+.|.++++.++++++++++.+.+.|+++
T Consensus 297 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 372 (448)
T 3meb_A 297 EGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDK----RLLQMFYDNVKEMSARIHRMRSLLHASLAKRK 372 (448)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 145 66777766554 66788999999999998753 2345666778999999999999999999987
Q ss_pred -CC------ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-C
Q 009517 437 -EG------ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-P 508 (533)
Q Consensus 437 -~g------~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~ 508 (533)
++ +.+..|++++|+|++++ ..++..+++++||++.||+ + |||++ .
T Consensus 373 ~~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~~~~~~ll~~~gV~v~~G~------g----Ris~a~~ 425 (448)
T 3meb_A 373 TPGPGSKGTWDHILTAIGMFTFTGLT-----------------PEHVDYLKEKWSIYLVKAG------G----RMSMCGL 425 (448)
T ss_dssp CCCSTTTCCCTHHHHCCSSEEECCCC-----------------HHHHHHHHHHHCEEECSGG------G----EEEGGGC
T ss_pred CCCcCcccccceeCCCceEEEecCCC-----------------HHHHHHHHHhCCEEEeCCC------c----EEEEecC
Confidence 66 77888999999997653 2335677788999999874 2 99997 5
Q ss_pred CcCcHHHHHHHHHHHHHH
Q 009517 509 QEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 509 ~~e~i~~~~~~l~~~l~~ 526 (533)
++++|++++++|++++++
T Consensus 426 ~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 426 TESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp CTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 888999999999999874
No 38
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.5e-45 Score=375.89 Aligned_cols=370 Identities=16% Similarity=0.222 Sum_probs=296.9
Q ss_pred HHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCC
Q 009517 77 VSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (533)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~ 156 (533)
..++.+...|+..+ ..++|+|+.|++.. +. |+.+.+++.+++.+
T Consensus 9 ~~~~~g~~~~d~~~-----~~~~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~-- 52 (383)
T 3kax_A 9 NRRGTHSIKWDTYK-----NEELIHAWIADMDF----------------------EV-------PQPIQTALKKRIEH-- 52 (383)
T ss_dssp ----------CCCS-----SSCCEECCCSSCSS----------------------CC-------CHHHHHHHHHHHHS--
T ss_pred eccCCCceeeeccC-----CCCeeecccccCCC----------------------CC-------CHHHHHHHHHHHhc--
Confidence 34455555554221 12499999998764 22 78999999998876
Q ss_pred CCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhC
Q 009517 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG 236 (533)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g 236 (533)
....|++. ..++++++++++.+.+|.++++++|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|
T Consensus 53 --~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g 127 (383)
T 3kax_A 53 --PIFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT-KENESVLVQPPIYPPFFEMVTTNN 127 (383)
T ss_dssp --CCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC-CTTCEEEECSSCCHHHHHHHHHTT
T ss_pred --CCCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC-CCCCEEEEcCCCcHHHHHHHHHcC
Confidence 25567766 6799999999999999988889999999999999999999998 899999999999999999999999
Q ss_pred CeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 237 GTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 237 ~~~~~v~~~~~~-~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
.+++.++++.++ +|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++
T Consensus 128 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 201 (383)
T 3kax_A 128 RQLCVSPLQKQNDTYAIDFEHLEKQFQQ------GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDI 201 (383)
T ss_dssp CEEEECCCEEETTEEECCHHHHHHHHTT------TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CEEEeccceecCCcEEEcHHHHHHHhCc------CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcccccc
Confidence 999999987533 467999999999954 7999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh--ccccCChHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQIL 393 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a 393 (533)
.+++. ...++..+..++ ..+++++.||||.+ |++|+|+||+++ .++++++.+..... .+++++++++.+
T Consensus 202 ~~~g~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a 272 (383)
T 3kax_A 202 IYADH-THTPFASLSEEL-----AARTITCMAPSKTF-NIAGLQASIIII--PNEKLRQAFTSIQYRQGFHGLNIFAYTA 272 (383)
T ss_dssp BCTTC-CCCCGGGSCHHH-----HTTEEEEECSHHHH-TCGGGCCEEEEC--CCHHHHHHHHHHHHHTTCCCCCHHHHHH
T ss_pred ccCCC-CceeHhhcCccc-----cCcEEEEEEChhhc-cCcchhheEEEe--CCHHHHHHHHHHHhhcccCCCCHHHHHH
Confidence 88663 334444432211 13579999999999 889999999986 25788888877654 345889999999
Q ss_pred HHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCCh
Q 009517 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPD 472 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (533)
+..+|... .+++++++++++++++.+.+.|++ +||+.++.+++++++|++++.. +. +.
T Consensus 273 ~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~ 331 (383)
T 3kax_A 273 MQSAYTEC----------NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSAL----------NL-SQ 331 (383)
T ss_dssp HHHHTTTC----------HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGG----------CC-CH
T ss_pred HHHHHHhh----------HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEcccc----------CC-CH
Confidence 99988642 244677888899999999999988 7899999999999999766521 11 34
Q ss_pred HHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 473 AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 473 ~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
..++..+++++||.+.||..|+. .+.+++||+++.++++|++++++|++++
T Consensus 332 ~~~~~~l~~~~gi~v~~g~~~~~-~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 332 DERTKLLEEKGKIIVEPGEKYGL-GGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHHTSCEECEESGGGCT-TCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCEEeECchhhcC-CCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 45566666689999999999984 4556999999988899999999998876
No 39
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=4.2e-46 Score=387.05 Aligned_cols=354 Identities=17% Similarity=0.265 Sum_probs=297.0
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|++|++++ +. |+.+++++.+++.. ....|++. ..++++++++
T Consensus 63 ~i~~~~~~~~~----------------------~~-------~~~v~~a~~~~~~~----~~~~y~~~--~~~l~~~l~~ 107 (421)
T 3l8a_A 63 LLQMWVADMDF----------------------LP-------VPEIKEAIINYGRE----HIFGYNYF--NDDLYQAVID 107 (421)
T ss_dssp CEECCSSCCCS----------------------CC-------CHHHHHHHHHHHHH----CCSSCBCC--CHHHHHHHHH
T ss_pred eeecccCCCCC----------------------CC-------CHHHHHHHHHHHhc----CCcCCCCC--CHHHHHHHHH
Confidence 99999998775 22 79999999998876 35677765 3899999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecC-CCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~ld~~~l 257 (533)
++.+.+|.++++++|++|+|+++|+..+++.+. ++||+|+++.|+|+++...+...|.+++.+|++ .+++|.+|+++|
T Consensus 108 ~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~-~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 186 (421)
T 3l8a_A 108 WERKEHDYAVVKEDILFIDGVVPAISIALQAFS-EKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQL 186 (421)
T ss_dssp HHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHH
T ss_pred HHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHH
Confidence 999999988889999999999999999999998 799999999999999999999999999999987 455678999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++. ++++|++++|+||||.+++++++++|+++|++||+++|+||+|.++.++|. .+.++..+..+.
T Consensus 187 e~~i~~~-----~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~---- 256 (421)
T 3l8a_A 187 EKDIIDN-----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGN-THHSLNTLDASY---- 256 (421)
T ss_dssp HHHHHHT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGSCTTG----
T ss_pred HHHhhcc-----CCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCccHHHcCchh----
Confidence 9999842 799999999999999999999999999999999999999999999998764 344444432221
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 414 (533)
...++++.|+||++ |++|+|+||+++ + +++++.+..... .+++++++++.++.++++. ..++
T Consensus 257 -~~~~i~~~s~sK~~-g~~G~~~G~~~~---~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~----------~~~~ 321 (421)
T 3l8a_A 257 -KDFTIILSSATKTF-NIAGTKNSFAII---QNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQY----------GKPW 321 (421)
T ss_dssp -GGTEEEEECSHHHH-TCGGGCCEEEEC---CSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH----------CHHH
T ss_pred -cCcEEEEEeChhhc-cCchhheEeEEc---CCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc----------cHHH
Confidence 24578999999999 789999999998 6 899998887653 4457899999999888742 1244
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCC
Q 009517 415 RDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFG 494 (533)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~ 494 (533)
+++++++++++++++.+.|+++|++.++.+++++++|++++.. +. +...++..+++++||.+.||..|+
T Consensus 322 ~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~----------~~-~~~~l~~~l~~~~gi~v~~g~~f~ 390 (421)
T 3l8a_A 322 LEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY----------AI-AQPQLSEKLQNEAKVVLNDGAHFG 390 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGG----------TC-CTTHHHHHHHHTTCEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEecccc----------CC-CHHHHHHHHHHhCCEEEECchhhC
Confidence 6778888999999999999887899999999999999766521 11 233455666677899999999997
Q ss_pred CCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 495 QVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 495 ~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
..+.+++||+++.++++|++++++|+++++
T Consensus 391 -~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 391 -KEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp -GGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred -CCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 445569999999899999999999998875
No 40
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=2.6e-45 Score=380.41 Aligned_cols=367 Identities=21% Similarity=0.313 Sum_probs=292.0
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|+.|.|...+. ...|+.+++++.+.+... ....|++..|..+||+++|
T Consensus 34 ~~i~l~~g~p~~~~~-------------------------~~~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~lr~~la 85 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKN-------------------------LLTSAAQIKKLKEAIDSQ---ECNGYFPTVGSPEAREAVA 85 (416)
T ss_dssp CCEECCCCCTTTTSC-------------------------SCCCHHHHHHHHHHHHTT---CSSSCCCTTCCHHHHHHHH
T ss_pred CeEEecCcCCCcccC-------------------------CCCCHHHHHHHHHHhhCC---ccCCcCCCCCCHHHHHHHH
Confidence 489999999863110 011788999998888652 2467988889999999999
Q ss_pred HHHHh------hcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCC
Q 009517 178 AGIEA------RDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWG 251 (533)
Q Consensus 178 ~~~~~------~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 251 (533)
+++++ .+|.++++++|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|++++.++++++.+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (416)
T 1bw0_A 86 TWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAIC-DAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWE 164 (416)
T ss_dssp HHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTE
T ss_pred HHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhC-CCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCC
Confidence 99983 25766788999999999999999999998 799999999999999999999999999999987655678
Q ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCC---CcccHHH
Q 009517 252 LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK---KFHSFKK 328 (533)
Q Consensus 252 ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~---~~~~~~~ 328 (533)
+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|++||++||+||+|.++.|++.. ...++..
T Consensus 165 ~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 238 (416)
T 1bw0_A 165 ADLDEIRRLKDD------KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238 (416)
T ss_dssp ECHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred CCHHHHHHHhcc------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence 999999999875 7899999999999999999999999999999999999999999998886531 2333322
Q ss_pred HHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH-----HHHHHHHHhhhccccCChHHHHHHHHHcCCCCC
Q 009517 329 VSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-----EVREQIYKVASVNLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 329 ~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~-----~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~ 403 (533)
+ +.+.++|++.||||.+ +++|+|+||+++. ++ .+...+......++++++++|+++..+|+...
T Consensus 239 ~-------~~~~~~i~~~s~sK~~-~~~Glr~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~- 307 (416)
T 1bw0_A 239 F-------ETTVPRVILGGTAKNL-VVPGWRLGWLLYV--DPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP- 307 (416)
T ss_dssp S-------CCSCCEEEEEESTTTT-SCGGGCCEEEEEE--CTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC-
T ss_pred c-------cCCCcEEEEecchhhC-CCCCceEEEEEee--CchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc-
Confidence 2 2334579999999998 7899999999982 22 23333333322457789999999988885321
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHcc
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNAT 483 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 483 (533)
.+++++++++++++++++.+.|+++||+.++.|.+++|+|++++... ..+..+...++..+++++
T Consensus 308 --------~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~ 372 (416)
T 1bw0_A 308 --------QEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK-------YRDIKTDVEFFEKLLEEE 372 (416)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGG-------BSSCCSHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHH-------cCCCCCHHHHHHHHHHHC
Confidence 24456778889999999999999988999888899999997654110 000113455566676789
Q ss_pred ceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 484 GIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 484 gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
||.+.||..|+. ++ ++||+++.++++|++++++|.+++++..
T Consensus 373 gi~v~~g~~f~~-~~--~iRis~~~~~e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 373 NVQVLPGTIFHA-PG--FTRLTTTRPVEVYREAVERIKAFCQRHA 414 (416)
T ss_dssp CEECEEGGGGTC-TT--EEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred CEEEecccccCC-CC--eEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999873 33 9999999888999999999999987654
No 41
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.5e-45 Score=381.75 Aligned_cols=366 Identities=19% Similarity=0.242 Sum_probs=294.2
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|||+.|.|+..+ . .++.+.+++.+++..... ....|++..|..+||+++++
T Consensus 45 ~idl~~g~~~~~~---------------------~------~~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~lr~~la~ 96 (425)
T 1vp4_A 45 AISFGGGVPDPET---------------------F------PRKELAEIAKEIIEKEYH-YTLQYSTTEGDPVLKQQILK 96 (425)
T ss_dssp CEECCCCSCCGGG---------------------S------CHHHHHHHHHHHHHHSHH-HHTSCCCTTCCHHHHHHHHH
T ss_pred ceeCCCCCCCccc---------------------C------CHHHHHHHHHHHHhhcch-hhcCCCCCCCCHHHHHHHHH
Confidence 8999999987411 0 146778888877765211 13679988899999999999
Q ss_pred HHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 179 GIEARDGFP-ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++.+++|.+ +++++|++|+|+++++..++++++ ++||+|+++.|+|+++...++..|++++.++++++ ++|+++|
T Consensus 97 ~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l 172 (425)
T 1vp4_A 97 LLERMYGITGLDEDNLIFTVGSQQALDLIGKLFL-DDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVL 172 (425)
T ss_dssp HHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHC-CTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHH
T ss_pred HHHhccCCCCCCcccEEEeccHHHHHHHHHHHhC-CCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHH
Confidence 998877877 778999999999999999999998 79999999999999999999999999999998753 5899999
Q ss_pred HHHHHHHHhc--CCCeeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcC
Q 009517 258 KKQLEAAKAK--GITVRALV-VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (533)
Q Consensus 258 ~~~i~~~~~~--g~~~~~ii-l~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~ 334 (533)
++++++.... +.++++|+ +++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+.
T Consensus 173 ~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~---- 247 (425)
T 1vp4_A 173 ERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE-TVDPIFKIG---- 247 (425)
T ss_dssp HHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSC-CCCCHHHHH----
T ss_pred HHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC-CCcCHHHhC----
Confidence 9999763211 12688884 679999999999999999999999999999999999999988654 334554441
Q ss_pred CCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 335 ~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
...++|++.||||.+ | +|+|+||+++ ++++++.+..... .++++++++|.++..+|+... +.+
T Consensus 248 ---~~~~~i~~~s~sK~~-~-~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~--------~~~ 311 (425)
T 1vp4_A 248 ---GPERVVLLNTFSKVL-A-PGLRIGMVAG---SKEFIRKIVQAKQSADLCSPAITHRLAARYLERYD--------LLE 311 (425)
T ss_dssp ---CTTTEEEEEESTTTT-C-GGGCEEEEEC---CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSC--------HHH
T ss_pred ---CCCCEEEEecccccc-c-cccceEEEee---CHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCC--------HHH
Confidence 223579999999999 7 8999999998 8999998887654 556789999999998885321 335
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C---CceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc
Q 009517 414 ERDGILSSLARRAKTLEDAFNSL-E---GITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP 489 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~-~---g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p 489 (533)
++++++++++++++.+.+.|++. | |+.++.|.+|+|+|++++. + . +...++..+++ +||.+.|
T Consensus 312 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~--~---------~-~~~~l~~~l~~-~gi~v~~ 378 (425)
T 1vp4_A 312 QLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE--G---------F-DTWEMFEYAKR-KKVFYVP 378 (425)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCT--T---------C-CTTTTHHHHHH-HTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCC--C---------C-CHHHHHHHHHH-CCCEEEC
Confidence 56778888999999999999874 5 6888888999999976641 1 1 12334445554 5999999
Q ss_pred CCCCCCC-CCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 490 GSGFGQV-PGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 490 g~~f~~~-~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
|..|+.. .+.++|||+++ .+++++++++++|+++++++.++
T Consensus 379 g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 379 GRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp GGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9988632 23459999998 57899999999999999987765
No 42
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=4.7e-45 Score=376.22 Aligned_cols=346 Identities=18% Similarity=0.257 Sum_probs=282.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+++.. ....|++. ..+||+++++++.+.+|.++++++|++|+|+++|+..++++++ ++||+|++
T Consensus 46 ~~~v~~a~~~~~~~----~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~gd~vl~ 118 (399)
T 1c7n_A 46 PPELIEGLKKYLDE----TVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFT-KPGDGVII 118 (399)
T ss_dssp CHHHHHHHHHHHHH----CCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhc----CCCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEE
Confidence 68899998888865 24578775 8999999999999888887888999999999999999999998 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
+.|+|+++...+...|.+++.+++++ +++|.+|+++|+++++.. ++++|++++||||||.+++.+++++|+++|
T Consensus 119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~ 193 (399)
T 1c7n_A 119 ITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKKDELQKIKDIV 193 (399)
T ss_dssp CSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred cCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCcCHHHHHHHHHHH
Confidence 99999999999999999999999863 334679999999999732 799999999999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHH
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYK 378 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~ 378 (533)
++||+++|+||+|.++.+++. ...++..+..++ ..+++++.||||.+ |++|+|+||+++ + +++++.+..
T Consensus 194 ~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~l~~ 263 (399)
T 1c7n_A 194 LKSDLMLWSDEIHFDLIMPGY-EHTVFQSIDEQL-----ADKTITFTAPSKTF-NIAGMGMSNIII---KNPDIRERFTK 263 (399)
T ss_dssp HHSSCEEEEECTTTTCBCTTC-CCCCGGGSCHHH-----HTTEEEEECSHHHH-TCGGGCCEEEEC---CCHHHHHHHHH
T ss_pred HHcCCEEEEEccccccccCCC-CcccHHHcCccc-----cCcEEEEEeChhhc-cccchheEEEEE---CCHHHHHHHHH
Confidence 999999999999999988653 233443321110 12468999999999 889999999997 5 679888877
Q ss_pred hhh-cc-ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccC
Q 009517 379 VAS-VN-LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQ 455 (533)
Q Consensus 379 ~~~-~~-~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~ 455 (533)
... .+ .++++++|.++.++|+.. .+++++++++++++++++.+.|++ +||+.++.+++++++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 333 (399)
T 1c7n_A 264 SRDATSGMPFTTLGYKACEICYKEC----------GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFR 333 (399)
T ss_dssp HHHHTTCCCCCHHHHHHHHHHHHHC----------HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECG
T ss_pred HHhhcccCCCCHHHHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcc
Confidence 654 32 367899999888887421 245677888899999999999998 78999999999999997654
Q ss_pred CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 456 LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
.. +. +...++..+++++||.+.||..|+. .+.++|||+++.++++|++++++|+++++++.++
T Consensus 334 ~~----------~~-~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~~ 396 (399)
T 1c7n_A 334 AL----------KM-DHKAMEEFMIHKAQIFFDEGYIFGD-GGIGFERINLAAPSSVIQESLERLNKALKDLKNR 396 (399)
T ss_dssp GG----------CC-CHHHHHHHHHHTTCCCCEEGGGGCG-GGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred cC----------CC-CHHHHHHHHHHhCCEEEeCccccCC-CCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHhc
Confidence 10 01 2344555655678999999998872 3445999999977889999999999999887653
No 43
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.5e-44 Score=374.20 Aligned_cols=380 Identities=15% Similarity=0.173 Sum_probs=304.9
Q ss_pred cCccccccchHHHHHHHHH-HhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHH
Q 009517 67 KCEYAVRGEIVSIAQRLQQ-ELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSI 145 (533)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~ 145 (533)
....+++..++..+..+.. .|++ +|||+.|.|.. +. |+.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~g~~---------~i~l~~~~~~~----------------------~~-------~~~v~ 63 (437)
T 3g0t_A 22 DLGMASIRDLVALVTNLEKATGTK---------FCRMEMGVPGL----------------------PA-------PQIGI 63 (437)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCC---------CEECCCCSCCS----------------------CC-------CHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHhcCCC---------EEeccCcCCCC----------------------CC-------CHHHH
Confidence 3445666677777766543 2444 99999999864 21 78999
Q ss_pred HHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCC--eEEEcC
Q 009517 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEND--GILCPI 222 (533)
Q Consensus 146 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd--~Vlv~~ 222 (533)
+++.+.+... ....|++..|..++|+++++++++.+|+++++++|++|+|+++++..+++.++. ++|| +|+++.
T Consensus 64 ~a~~~~~~~~---~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~ 140 (437)
T 3g0t_A 64 ETEIQKLREG---VASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFID 140 (437)
T ss_dssp HHHHHHHHHT---GGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEE
T ss_pred HHHHHHHhCC---cCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeC
Confidence 9999888751 127899999999999999999999999999999999999999999999999851 4899 999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|.++...++..|++++.++++ +.+|.+|+++|+++++.. ++++|++++||||||.+++.+++++|+++|++|
T Consensus 141 p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~ 214 (437)
T 3g0t_A 141 PGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQTG-----QFCSIIYSNPNNPTWQCMTDEELRIIGELATKH 214 (437)
T ss_dssp SCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred CCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhcC-----CceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence 99999999999999999999998 457789999999999432 799999999999999999999999999999999
Q ss_pred CCEEEEccccccccccCCCCc---ccH-HHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH-H--
Q 009517 303 GLVLLADEVYQENVYVPEKKF---HSF-KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-Q-- 375 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~-~-- 375 (533)
|+++|+||+|.++.+++..+. .++ ..+ .+ ...+++++.||||++ |++|+|+||+++ ++++++ .
T Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~ 284 (437)
T 3g0t_A 215 DVIVIEDLAYFGMDFRKDYSHPGEPLYQPSV-AN-----YTDNYILALSSSKAF-SYAGQRIGVLMI---SGKLYEREYP 284 (437)
T ss_dssp TCEEEEECTTTTCCTTSCCCSTTSSCCCCCG-GG-----TCSCEEEEEESTTTT-SCGGGCCEEEEE---CHHHHHCBCG
T ss_pred CcEEEEEcchhhcccCCCcCcccccchhhcc-CC-----CCCcEEEEEcCccCC-CCccceeEEEEE---CHHHhhhhhh
Confidence 999999999999888643222 000 122 11 123579999999999 889999999998 889888 7
Q ss_pred ---------------HHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 376 ---------------IYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 376 ---------------l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
+..... .++++++++|.++..+|+.. +.|..++++++++++++++.+.+.|+++ |+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 356 (437)
T 3g0t_A 285 DLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC-------NDGEYNFRDSVIEYGRKARIMKKMFLDN-GF 356 (437)
T ss_dssp GGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH-------HTTSCCHHHHHHHHHHHHHHHHHHHHTT-TE
T ss_pred cccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc-------HhHHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 665554 56788999999999888521 1111116778889999999999999999 99
Q ss_pred eEe------cC-CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcC
Q 009517 440 TCN------KA-EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQED 511 (533)
Q Consensus 440 ~~~------~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e 511 (533)
.+. .| .+++|+|++++ . . +...++..+ .++||.+.||..|+. ...++|||+++ .+++
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~-~-----------~-~~~~l~~~L-~~~gi~v~~~~~~~~-~~~~~iRis~~~~~~e 421 (437)
T 3g0t_A 357 NIVYDKDGNEPLADGFYFTVGYK-G-----------M-DSSKLIEKF-VRYGMCAITLKTTGS-KRNEAMRICTSLLPES 421 (437)
T ss_dssp EESSCEETTEECCSSSEEEEEET-T-----------C-CHHHHHHHH-HHTTEECEESTTTTC-CCTTCEEEECSSSCGG
T ss_pred EEeccccCCCCCceeEEEEEecC-C-----------C-CHHHHHHHH-HHcCeEEeeccccCC-CCCCEEEEEEecCCHH
Confidence 888 34 89999997765 1 1 234445454 467999999999874 33348999998 6899
Q ss_pred cHHHHHHHHHHHHHH
Q 009517 512 KIPAIVTRLTDFHKN 526 (533)
Q Consensus 512 ~i~~~~~~l~~~l~~ 526 (533)
+|++++++|++++++
T Consensus 422 ~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 422 QFPDLEKRLQMLNAE 436 (437)
T ss_dssp GHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988753
No 44
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=4.5e-45 Score=380.55 Aligned_cols=380 Identities=20% Similarity=0.269 Sum_probs=299.2
Q ss_pred cCcCcccccCcc-ccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCccccc
Q 009517 59 DSLNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQ 137 (533)
Q Consensus 59 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~ 137 (533)
..+++++..+++ +++..+..+......... + +++|+|++|+|++ +.
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~------~~~i~l~~~~~~~----------------------~~---- 70 (432)
T 3ei9_A 24 VSRNSNMSKLQAGYLFPEIARRRSAHLLKYP-D------AQVISLGIGDTTE----------------------PI---- 70 (432)
T ss_dssp CCCCHHHHHCCSSCHHHHHHHHHHHHHHHCT-T------CCCEECSSCCCCS----------------------CC----
T ss_pred cccChHHHhCCCCccHHHHHHHHHhhhhcCC-C------CCeEEccCCCCCC----------------------CC----
Confidence 445667777776 477666666555443211 1 2399999999874 32
Q ss_pred CCCCHHHHHHHHHHHhcCCC-CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 138 GLFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 138 ~~~p~~v~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
|+.+++++.+++.+... .....|++..|..+||+++++++.+ +..+++++|++|+|+++++..+ ..++ ++||
T Consensus 71 ---~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~-~~gd 143 (432)
T 3ei9_A 71 ---PEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMF-GSNV 143 (432)
T ss_dssp ---CHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHH-CTTC
T ss_pred ---CHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHc-CCCC
Confidence 78999999888875321 1346799889999999999999974 5557789999999999999985 5666 7999
Q ss_pred eEEEcCCcCcchHHHHHHhCC------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 217 GILCPIPQYPLYSASIALHGG------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~------------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
+|++++|+|+++...++..|. +++.++++.+.++..|++. .+++++|++++||||||
T Consensus 144 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG 212 (432)
T 3ei9_A 144 TIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTG 212 (432)
T ss_dssp CEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTC
T ss_pred EEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCC
Confidence 999999999999999998884 6788888766566666443 12789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+ .. ...++|++.||||+| |++|+|+||++
T Consensus 213 ~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~--~~~~~~~-~~-----~~~~~i~~~S~SK~~-g~~G~r~G~~~ 283 (432)
T 3ei9_A 213 AAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN--PRSIFEI-PG-----AEEVAMETASFSNYA-GFTGVRLGWTV 283 (432)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC--CSSGGGS-TT-----GGGTEEEEEESHHHH-CTTTTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC--CCChhhc-CC-----CCCeEEEEecchhcc-CCcccceEEEE
Confidence 999999999999999999999999999999888643 2333332 11 123579999999999 89999999999
Q ss_pred EecCCHHH--------HHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 365 VTGFSAEV--------REQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 365 ~~~~~~~~--------~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
+ ++++ ++.+..... .++++++++|.++.+++.+ ...+++++++++++++++++.+.|++
T Consensus 284 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~ 351 (432)
T 3ei9_A 284 I---PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTP---------EGLEAMHKVIGFYKENTNIIIDTFTS 351 (432)
T ss_dssp C---CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred E---ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc---------ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 6666 677766654 5567899999999888852 12245678889999999999999999
Q ss_pred CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHH
Q 009517 436 LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPA 515 (533)
Q Consensus 436 ~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~ 515 (533)
+ |+.+..+.+++|+|++++ . .+...++..+++++||.+.||..|+ ..+.++|||++..++++|++
T Consensus 352 ~-g~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~ll~~~gv~v~~g~~f~-~~~~~~iRis~~~~~e~l~~ 416 (432)
T 3ei9_A 352 L-GYDVYGGKNAPYVWVHFP--N-----------QSSWDVFAEILEKTHVVTTPGSGFG-PGGEGFVRVSAFGHRENILE 416 (432)
T ss_dssp T-TCCEEECSSSSEEEEECT--T-----------SCHHHHHHHHHHHHCEECEEGGGGC-GGGTTEEEEECCSCHHHHHH
T ss_pred C-CceecCCCcceEEEEECC--C-----------CCHHHHHHHHHHHCCEEEeCchHhC-CCCCCEEEEEecCCHHHHHH
Confidence 8 999988888999997765 1 1245566778888899999999998 45566999999889999999
Q ss_pred HHHHHHHHHH
Q 009517 516 IVTRLTDFHK 525 (533)
Q Consensus 516 ~~~~l~~~l~ 525 (533)
++++|++--+
T Consensus 417 ~l~rl~~~~~ 426 (432)
T 3ei9_A 417 ACRRFKQLYK 426 (432)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhh
Confidence 9999987543
No 45
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.6e-44 Score=371.27 Aligned_cols=374 Identities=15% Similarity=0.201 Sum_probs=288.0
Q ss_pred HHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCC
Q 009517 78 SIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPG 157 (533)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~ 157 (533)
.++.....|+.+++.+- .+++|||+.|.+.. .. |+.+.+++.+++..
T Consensus 10 ~~~~~~~~~d~~~~~~~-~~~~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~--- 56 (390)
T 1d2f_A 10 RHGTWCTQWDYVADRFG-TADLLPFTISDMDF----------------------AT-------APCIIEALNQRLMH--- 56 (390)
T ss_dssp ---------------------CEECCSSSCSS----------------------CC-------CHHHHHHHHHHHTT---
T ss_pred ccCCCccchhhhccccC-CCCeeEeeecCCCC----------------------CC-------CHHHHHHHHHHHhC---
Confidence 34444445544433111 13489999998764 21 78899999888864
Q ss_pred CCccccCCCcccHH-HHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhC
Q 009517 158 RATGAYSHSQGIKG-LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG 236 (533)
Q Consensus 158 ~~~~~Y~~~~G~~~-lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g 236 (533)
....|++. ..+ ||+++++++.+.+|.++++++|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|
T Consensus 57 -~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g 132 (390)
T 1d2f_A 57 -GVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWS-ETGEGVVIHTPAYDAFYKAIEGNQ 132 (390)
T ss_dssp -CCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSS-CTTCEEEEEESCCHHHHHHHHHTT
T ss_pred -CCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCCcHHHHHHHHHCC
Confidence 24578775 678 9999999999888988889999999999999999999998 799999999999999999999999
Q ss_pred CeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 237 GTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 237 ~~~~~v~~~~~~-~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
.+++.+|++.++ +|.+|+++|++++++. ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++
T Consensus 133 ~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 207 (390)
T 1d2f_A 133 RTVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDM 207 (390)
T ss_dssp CEEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred CEEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 999999987553 5779999999999742 6899999999999999999999999999999999999999999998
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh--cc-ccCChHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VN-LCSNISGQI 392 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--~~-~~~~~~~q~ 392 (533)
.+++. .+.++..+ .++..-+ +.||||.+ |++|+|+||+++ .++++++.+..... .+ ++++++++.
T Consensus 208 ~~~g~-~~~~~~~~-------~~~~~d~-~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (390)
T 1d2f_A 208 VWGEQ-PHIPWSNV-------ARGDWAL-LTSGSKSF-NIPALTGAYGII--ENSSSRDAYLSALKGRDGLSSPSVLALT 275 (390)
T ss_dssp BCSSS-CCCCGGGT-------CCSSEEE-EECSHHHH-TCGGGCCEEEEE--CSHHHHHHHHHHHHTTSCCCSCCHHHHH
T ss_pred ccCCC-CCcCHHHc-------chhhHhh-ccCccHhh-cccChhheEEEE--CCHHHHHHHHHHHhhhcccCCCCHHHHH
Confidence 88653 33443332 2221013 99999999 789999999997 23788888876653 33 378899998
Q ss_pred HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCC
Q 009517 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP 471 (533)
Q Consensus 393 a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 471 (533)
++.++|+. ..+++++++++++++++.+.+.|++ +||+.++.+++++++|++++ .. +. +
T Consensus 276 a~~~~l~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~-~ 334 (390)
T 1d2f_A 276 AHIAAYQQ----------GAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLR--PL--------NI-D 334 (390)
T ss_dssp HHHHHHHH----------CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECG--GG--------CC-C
T ss_pred HHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEcc--cc--------CC-C
Confidence 88887742 1244677888899999999999998 78999899999999997654 10 01 2
Q ss_pred hHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 472 DAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 472 ~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
...++..+++++||.+.||..|+. .+.++|||+++.++++|++++++|+++++++
T Consensus 335 ~~~l~~~l~~~~gi~v~~g~~f~~-~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 335 DNALQKALIEQEKVAIMPGYTYGE-EGRGFVRLNAGCPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp HHHHHHHHHHTTCEECEEGGGGCG-GGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCEEeeCccccCC-CCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 344555665578999999999862 3345999999977889999999999988764
No 46
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.7e-44 Score=370.71 Aligned_cols=352 Identities=15% Similarity=0.245 Sum_probs=291.6
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|++.. +. |+.+++++.+++.+ ....|++ +..++++++++
T Consensus 34 ~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~----~~~~y~~--~~~~~~~~l~~ 78 (391)
T 4dq6_A 34 LLPMWVADMDF----------------------KA-------APCIIDSLKNRLEQ----EIYGYTT--RPDSYNESIVN 78 (391)
T ss_dssp SEECCSSSCSS----------------------CC-------CHHHHHHHHHHHTT----CCCCCBC--CCHHHHHHHHH
T ss_pred ceeccccCCCC----------------------CC-------CHHHHHHHHHHHhC----CCCCCCC--CCHHHHHHHHH
Confidence 89999998764 22 78999999988875 2456766 56999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecC--CCCCCCCCHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD--EATGWGLETSE 256 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~~ld~~~ 256 (533)
++.+.+|.++++++|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|++++.++++ .+++|.+|+++
T Consensus 79 ~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~ 157 (391)
T 4dq6_A 79 WLYRRHNWKIKSEWLIYSPGVIPAISLLINELT-KANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYED 157 (391)
T ss_dssp HHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHH
T ss_pred HHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHH
Confidence 999999988889999999999999999999998 899999999999999999999999999999988 55567899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
+++++++ +++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+..+.
T Consensus 158 l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~--- 226 (391)
T 4dq6_A 158 IENKIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH-KHIPMASISKEF--- 226 (391)
T ss_dssp HHHHCTT-------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGSCHHH---
T ss_pred HHHHhhc-------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC-CccCHHHcCccc---
Confidence 9998853 88999999999999999999999999999999999999999999988763 334443332211
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 414 (533)
..+++++.||||.+ |++|+|+||+++ .++++++.+..... .+++++++++.++..+|... .++
T Consensus 227 --~~~~i~~~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----------~~~ 291 (391)
T 4dq6_A 227 --EKNTITCMAPTKTF-NIAGLQSSYVVL--PDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG----------ESW 291 (391)
T ss_dssp --HHTEEEEECSHHHH-TCGGGCCEEEEC--CSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC----------HHH
T ss_pred --cCcEEEEEechhhc-cCcccceEEEEe--CCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch----------HHH
Confidence 13578999999999 889999999987 23488888877653 44578899998888877421 244
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC
Q 009517 415 RDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
+++++++++++++.+.+.|++ +||+.++.+++++++|++++.. + .+...++..+++++||.+.||..|
T Consensus 292 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~l~~~~gi~v~~g~~~ 360 (391)
T 4dq6_A 292 LESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSAL----------G-LSDEELESILVQKGKVALNQGNSF 360 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGG----------C-CCHHHHHHHHHHTTCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhc----------C-CCHHHHHHHHHHhCCEEeeCchhh
Confidence 677888899999999999988 6899999999999999765410 1 124455556665559999999999
Q ss_pred CCCCCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 494 ~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
+. .+.+++||+++.++++|++++++|++++
T Consensus 361 ~~-~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 361 GI-GGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp CT-TCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CC-CCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 84 4556999999988899999999999876
No 47
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.9e-44 Score=371.42 Aligned_cols=338 Identities=16% Similarity=0.148 Sum_probs=270.8
Q ss_pred CHHHHHHHHH-HHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHH--HhccCCC
Q 009517 141 SADSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQ--LLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~-~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~--~l~~~~g 215 (533)
++.+++++.+ .+... ....|++..|..++|+++++++.+.++..++++ +|++|+|+++++..+++ .++ ++|
T Consensus 46 ~~~v~~a~~~~~~~~~---~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~-~~g 121 (397)
T 3fsl_A 46 LQAVAEAEARLNAQPH---GASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRY-FPE 121 (397)
T ss_dssp CHHHHHHHHHHHHSCC---CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHH-CTT
T ss_pred cHHHHHHHHhhccCcc---ccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhc-CCC
Confidence 5889999888 77642 256899999999999999999986655444688 89999999999999954 445 799
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
|+|+++.|+|.+|...++..|.+++.+++..++++++|++.+++++++. .++++++++++||||||.+++.+++++|
T Consensus 122 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l 198 (397)
T 3fsl_A 122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL---QAGSIVLLHPCCHNPTGADLTNDQWDAV 198 (397)
T ss_dssp CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC---CTTCEEEECSSSCTTTCCCCCHHHHHHH
T ss_pred CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCCCCcCCCHHHHHHH
Confidence 9999999999999999999999999999855557899999999999742 1268888889999999999999999999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
+++|++||+++|+||+|.++.+++.....++..+. + ...++|++.||||++ |++|+|+||+++...+++++..
T Consensus 199 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~-----~~~~~i~~~S~SK~~-~~~G~riG~~~~~~~~~~~~~~ 271 (397)
T 3fsl_A 199 IEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIA-S-----AGLPALVSNSFSKIF-SLYGERVGGLSVMCEDAEAAGR 271 (397)
T ss_dssp HHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHH-H-----TTCCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHHH
T ss_pred HHHHHhCCEEEEEecCchhhccCcccccHHHHHHH-h-----cCCCEEEEecccccc-cCcCCCeeEEEEecCCHHHHHH
Confidence 99999999999999999999886433334444432 2 123579999999999 8999999999864346666654
Q ss_pred HHH----hh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEecCCce
Q 009517 376 IYK----VA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITCNKAEGA 447 (533)
Q Consensus 376 l~~----~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~gg 447 (533)
+.. .. ..+.+++.++|.++..++.+. .....|.+++++++++++++++++.+.|++++ |+.+..|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 347 (397)
T 3fsl_A 272 VLGQLKATVRRNYSSPPNFGAQVVAAVLNDE----ALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRG 347 (397)
T ss_dssp HHHHHHHHHHTTTSSCCSHHHHHHHHHHTSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCS
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCce
Confidence 422 22 245567889999998888642 12223456778899999999999999999874 7888889999
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l 524 (533)
+|+|++++ . ..+..+++++||.+.||. ||+++ .++++|++++++|++++
T Consensus 348 ~~~~~~~~----------------~-~~~~~~l~~~gi~v~~g~-----------Ris~~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 348 MFSYTGLS----------------A-AQVDRLREEFGVYLIASG-----------RMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp SEEECCCC----------------H-HHHHHHHHTTCEECCTTC-----------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred EEEecCCC----------------H-HHHHHHHHhCCEEECCCC-----------eEEEEecCHhhHHHHHHHHHhhC
Confidence 99996553 1 224577888999999852 99998 58899999999998753
No 48
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=6.8e-44 Score=367.44 Aligned_cols=341 Identities=19% Similarity=0.301 Sum_probs=276.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++.+.+++.+++.+... ....|++..|..+||++++++++ +++++|++|+|+++++..+++++. ++||+|++
T Consensus 49 ~~~v~~a~~~~~~~~~~-~~~~y~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~~~al~~~~~~~~-~~gd~Vl~ 120 (397)
T 2zyj_A 49 KEEAAEAAARILREKGE-VALQYSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFL-DEGSPVLL 120 (397)
T ss_dssp HHHHHHHHHHHHHHHHH-HHTSCCCTTCCHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHHHHhcch-hhhCCCCCCCCHHHHHHHHHHhC------CChhhEEEeccHHHHHHHHHHHhC-CCCCEEEE
Confidence 46777777777764210 13578888899999999999983 567899999999999999999998 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-EeCCCCCCccCCCHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~ii-l~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
+.|+|+++...++..|.+++.++.+++ ++|+++|++++++. ++++|+ +++||||||.+++.+++++|+++|
T Consensus 121 ~~p~y~~~~~~~~~~g~~~~~~~~~~~---~~d~~~l~~~l~~~-----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~ 192 (397)
T 2zyj_A 121 EAPSYMGAIQAFRLQGPRFLTVPAGEE---GPDLDALEEVLKRE-----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMV 192 (397)
T ss_dssp EESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHHHHHHC-----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHcCCEEEecCcCCC---CCCHHHHHHHHhhc-----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHH
Confidence 999999999999999999999998753 58999999999862 578874 679999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
++||+++|+||+|.++.+++. ...++..+..+. ...+++++.||||++ | +|+|+||+++ ++++++.+...
T Consensus 193 ~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~----~~~~~i~~~s~sK~~-~-~G~r~G~~~~---~~~~~~~l~~~ 262 (397)
T 2zyj_A 193 MERGLVVVEDDAYRELYFGEA-RLPSLFELAREA----GYPGVIYLGSFSKVL-S-PGLRVAFAVA---HPEALQKLVQA 262 (397)
T ss_dssp HHHTCCEEEECTTTTCBCSSC-CCCCHHHHHHHH----TCCCEEEEEESTTTT-C-GGGCCEEEEC---CHHHHHHHHHH
T ss_pred HHcCCEEEEeCCcccccCCCC-CCCchhhhCccc----CCCeEEEEecccccc-c-ccceeEEEec---CHHHHHHHHHH
Confidence 999999999999999988653 334555542110 003579999999999 7 8999999998 89999988776
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-CceEecCCceeEEecccCC
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LE-GITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~-g~~~~~~~gg~~~~~~~~~ 456 (533)
.. .++++++++|.++..+|+.. .+ +++++++++++++++.+.+.|++ +| |+.++.|.+|+|+|++++.
T Consensus 263 ~~~~~~~~~~~~~~a~~~~l~~~--------~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~ 333 (397)
T 2zyj_A 263 KQGADLHTPMLNQMLVHELLKEG--------FS-ERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPK 333 (397)
T ss_dssp HHHHHSSCCHHHHHHHHHHHTTT--------HH-HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECST
T ss_pred HHhhcCCCCHHHHHHHHHHHHhC--------CH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCC
Confidence 54 45677999999999998742 13 55677888899999999999987 57 6998888999999976641
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-CCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-PGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+ . +...++..++ ++||.+.||..|+.. .+.++|||+++ .++++|++++++|+++++++.+
T Consensus 334 --~---------~-~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 334 --G---------L-SAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp --T---------C-CHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --C---------C-CHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 2344555554 569999999988632 23459999998 5788999999999999988764
No 49
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=8.9e-43 Score=362.75 Aligned_cols=345 Identities=21% Similarity=0.360 Sum_probs=275.1
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCC--CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH-HhC
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFP--ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~--~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~-~~g 236 (533)
...|++..|..+||+++|+++++.+|.. +++++|++|+|+++++..++++++ ++||+|+++.|+|+++...+. ..|
T Consensus 76 ~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~~g 154 (428)
T 1iay_A 76 IANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA-DPGDAFLVPSPYYPAFNRDLRWRTG 154 (428)
T ss_dssp HHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC-CTTCEEEEESSCCTTHHHHTTTTTC
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhC-CCCCeEEEccCCCcchHHHHHHhcC
Confidence 4679998899999999999999888866 778999999999999999999998 899999999999999987554 679
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
++++.++++.+++|++|++++++++++....++++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.
T Consensus 155 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 234 (428)
T 1iay_A 155 VQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATV 234 (428)
T ss_dssp CEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGC
T ss_pred CEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccc
Confidence 99999999766678999999999998754445579999999999999999999999999999999999999999999988
Q ss_pred ccCCCCcccHHHHHhhc--CCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHH
Q 009517 317 YVPEKKFHSFKKVSRSM--GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394 (533)
Q Consensus 317 ~~~~~~~~~~~~~~~~~--~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~ 394 (533)
|++. .+.++..+.... .+..++ +++++.||||.+ |++|+|+||+++ .++++++.+.+.. ..+++++++|.++
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~~~~~d-~viv~~s~sK~~-g~~Glr~G~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~a~ 308 (428)
T 1iay_A 235 FDTP-QFVSIAEILDEQEMTYCNKD-LVHIVYSLSKDM-GLPGFRVGIIYS--FNDDVVNCARKMS-SFGLVSTQTQYFL 308 (428)
T ss_dssp CSSS-CCCCHHHHHTSGGGTTSCTT-SEEEEEESTTTS-SCGGGCEEEEEE--SCHHHHHHHHHHH-TTSCCCHHHHHHH
T ss_pred cCCC-CccCHHHhccccccccCCCC-cEEEEecchhhc-CCCCceEEEEEe--CCHHHHHHHHHHH-hcccCCHHHHHHH
Confidence 8653 344554543210 000123 689999999999 889999999987 2577888887654 3467899999999
Q ss_pred HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHH
Q 009517 395 SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAF 474 (533)
Q Consensus 395 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (533)
..+|++. . ...+++++++++++++++++.+.|+++ |+.++++++|+|+|++++.... .........
T Consensus 309 ~~~l~~~-----~--~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~ 374 (428)
T 1iay_A 309 AAMLSDE-----K--FVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDLRPLLR------ESTFDSEMS 374 (428)
T ss_dssp HHHTTCH-----H--HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEECGGGCS------SSSHHHHHH
T ss_pred HHHhcCh-----H--HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEechhhcC------CCchhHHHH
Confidence 9998642 1 122346778889999999999999998 8888888889999976641100 000001234
Q ss_pred HHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHH
Q 009517 475 YCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 475 ~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~ 526 (533)
++..+++++||.+.||..|+. .+.++|||+++ .+++++++++++|++++++
T Consensus 375 l~~~l~~~~gi~v~~~~~~~~-~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 375 LWRVIINDVKLNVSPGSSFEC-QEPGWFRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp HHHHHHHTSCEECEEGGGGTC-SSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEeCchhhCC-CCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 555666666999999998873 23459999998 8999999999999988764
No 50
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.7e-44 Score=373.50 Aligned_cols=375 Identities=17% Similarity=0.178 Sum_probs=284.7
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++..+.++...+ . +|+|+.|.|+.. .++. |+.+++++.+.+...
T Consensus 21 ~~~~~~~l~~~~-~---------~i~l~~g~~~~~-------------------~~~~-------~~~~~~a~~~~~~~~ 64 (422)
T 3d6k_A 21 VTAKYAELKAKN-L---------SLDLTRGKPSAE-------------------QLDL-------SNDLLSLPGGDFRTK 64 (422)
T ss_dssp HHHHHHHHHHTT-C---------CEECCCCSCCHH-------------------HHHT-------TGGGGGCSTTCCBCT
T ss_pred HHHHHHHHhccC-C---------eEeCCCCCCChh-------------------hCCC-------cHHHHHHHHHHHhhc
Confidence 556666666543 2 799999998610 0021 445555554432111
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH--HHHHHHhccCC------------CCeEEEc
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV--HMMMQLLIRSE------------NDGILCP 221 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al--~~~~~~l~~~~------------gd~Vlv~ 221 (533)
.......|++..|..+||+++|++++ +++++|++|+|+++++ .++++.+. .+ +|+|+++
T Consensus 65 ~~~~~~~Y~~~~G~~~lr~~ia~~~~------~~~~~i~~t~G~~~al~l~~~~~~l~-~~~~~g~~~~~~~d~~~Vl~~ 137 (422)
T 3d6k_A 65 DGVDCRNYGGLLGIADIRELWAEALG------LPADLVVAQDGSSLNIMFDLISWSYT-WGNNDSSRPWSAEEKVKWLCP 137 (422)
T ss_dssp TCCBTTSSCCSSCCHHHHHHHHHHHT------CCGGGEEECSSCHHHHHHHHHHHHHH-HCCTTCSSCGGGSSCCEEEEE
T ss_pred cchhhhCCCCCCCCHHHHHHHHHHhC------CChhHEEEecchHHHHHHHHHHHHhc-CcccccccccccCCCCEEEEe
Confidence 11125689999999999999999984 6789999999999997 67777776 44 3479999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-EeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~ii-l~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+|+|++|...++..|++++.++++++ ++|+++|++++++. ++++|+ +++||||||.+++.+++++|+++|+
T Consensus 138 ~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~ 209 (422)
T 3d6k_A 138 VPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMST 209 (422)
T ss_dssp ESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCC
T ss_pred CCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999864 59999999999642 688888 5799999999999999999999999
Q ss_pred -HcCCEEEEccccccccccC-CCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH
Q 009517 301 -KEGLVLLADEVYQENVYVP-EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (533)
Q Consensus 301 -~~~~~lI~De~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~ 378 (533)
+||++||+||+|..+.|.. +.++.++..+.... +...++|++.||||+. ++|+|+||+++ ++++++.+..
T Consensus 210 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~S~SK~~--~~GlriG~~~~---~~~l~~~l~~ 281 (422)
T 3d6k_A 210 AAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA---GNPNRFWFMSSTSKIT--HAGSGVSFFAS---SKENIEWYAS 281 (422)
T ss_dssp SSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT---TCTTCEEEEEESTTTS--CTTSSCEEEEC---CHHHHHHHHH
T ss_pred hccCCEEEEECCccccccCCCCCCCcChhhHhhcc---CCCCcEEEEcChhhhc--CcccceEEEEe---CHHHHHHHHH
Confidence 9999999999998633322 22344554432222 1234689999999973 58999999998 8999999988
Q ss_pred hhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecCCceeEEecc
Q 009517 379 VAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 379 ~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~gg~~~~~~ 453 (533)
... .+++++.++|.++..+|++. ..+.++++++++.++++++.+.+.|.+ ++++.++.|++|+|+|++
T Consensus 282 ~~~~~~~~~~~~~q~a~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~ 354 (422)
T 3d6k_A 282 HANVRGIGPNKLNQLAHAQFFGDV-------AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVD 354 (422)
T ss_dssp HHHHHCSCCCHHHHHHHHHHHCSH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEE
T ss_pred HHHhhcCCCCHHHHHHHHHHHhCc-------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEE
Confidence 765 56788999999999999741 124456677888888888888887765 334777889999999977
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-CCCCCCC--CCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-GSGFGQV--PGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g~~f~~~--~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
++.. +... +.++|+++||.+.| |..|+.. .+.++||||++ .+++++++++++|+++++++.+
T Consensus 355 ~~~~-------------~~~~-~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 355 VVPG-------------TASR-VVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp ESTT-------------CHHH-HHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-------------CHHH-HHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6511 1223 34677889999999 5557411 23459999998 7999999999999999988765
Q ss_pred H
Q 009517 530 K 530 (533)
Q Consensus 530 ~ 530 (533)
+
T Consensus 421 ~ 421 (422)
T 3d6k_A 421 E 421 (422)
T ss_dssp T
T ss_pred c
Confidence 3
No 51
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.8e-43 Score=368.78 Aligned_cols=346 Identities=19% Similarity=0.324 Sum_probs=280.6
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH-HhCC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHGG 237 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~-~~g~ 237 (533)
..|++..|..+||+++++++++.++ +++++++|++|+|+++|+..++++++ ++||+|+++.|+|+++...+. ..|.
T Consensus 80 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~ 158 (435)
T 3piu_A 80 ALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLA-DPGEAVLIPTPYYPGFDRDLKWRTGV 158 (435)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHTTTTTCC
T ss_pred cccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhc-CCCCeEEECCCccccHHHHHHHhcCC
Confidence 5799999999999999999986544 56778999999999999999999998 899999999999999998888 7899
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 009517 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 238 ~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~ 317 (533)
+++.++.+++++|.+|+++|++++++....+.++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.|
T Consensus 159 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 238 (435)
T 3piu_A 159 EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAF 238 (435)
T ss_dssp EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC
T ss_pred EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 99999998877788999999999988666666899999999999999999999999999999999999999999999988
Q ss_pred cCCCCcccHHHHHhhcCCCCC----CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHH
Q 009517 318 VPEKKFHSFKKVSRSMGYGEK----DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQIL 393 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~----~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a 393 (533)
++. .+.++..+..+.. .+. ..+++++.||||++ |++|+|+||+++ .++++++.+.+.. .+++.+++.|.+
T Consensus 239 ~~~-~~~~~~~~~~~~~-~d~~~~~~~~~i~i~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~ 312 (435)
T 3piu_A 239 SSP-SFISVMEVLKDRN-CDENSEVWQRVHVVYSLSKDL-GLPGFRVGAIYS--NDDMVVAAATKMS-SFGLVSSQTQHL 312 (435)
T ss_dssp SSS-CCCCHHHHHHC--------CGGGGEEEEEESSSSS-CCGGGCEEEEEE--SCHHHHHHHHHHG-GGSCCCHHHHHH
T ss_pred CCC-CCcCHHHhccccc-cccccCCCCCEEEEEeeeccc-CCCceeEEEEEe--CCHHHHHHHHHHh-hcCCCCHHHHHH
Confidence 763 4556555543210 010 23678999999999 889999999987 2566777776554 345678899999
Q ss_pred HHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChH
Q 009517 394 ASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDA 473 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (533)
+..+|.+.. ...+++++++++++++++.+.+.|+++ |+.+..+++|+|+|++++.... ........
T Consensus 313 ~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l~~~~~------~~~~~~~~ 378 (435)
T 3piu_A 313 LSAMLSDKK-------LTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDMRHLLR------SNTFEAEM 378 (435)
T ss_dssp HHHHHHCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSEEEEECGGGSS------SSSHHHHH
T ss_pred HHHHhcChH-------HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEcccccc------cCCchhHH
Confidence 888886321 113345778888999999999999998 9999999999999976641100 00000134
Q ss_pred HHHHHHHHccceEEEcCCCCCCCCCCceEEEEecC-CcCcHHHHHHHHHHHHHHHH
Q 009517 474 FYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILP-QEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 474 ~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~ 528 (533)
.++.++++++||.+.||..|+ ..+.++|||+++. ++++|++++++|+++++++.
T Consensus 379 ~~~~~l~~~~gi~v~~g~~~~-~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 379 ELWKKIVYEVHLNISPGSSCH-CTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHTSCEECEEGGGGT-CSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEeCCcccC-CCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 556677777799999999997 3455699999984 89999999999999988764
No 52
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.3e-43 Score=363.29 Aligned_cols=366 Identities=22% Similarity=0.346 Sum_probs=291.2
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++++..++.+++..+...+.. .+ +|||+.|.|.. +. |
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-----~~---------~i~l~~~~~~~----------------------~~-------~ 40 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLAQR-----LG---------AVNLGQGFPSN----------------------PP-------P 40 (381)
T ss_dssp CGGGGGC---CHHHHHHHHHH-----HT---------CEECCCCSCSS----------------------CC-------C
T ss_pred hhhhhhcCccHHHHHHHHHhc-----CC---------eEEecCCCCCC----------------------CC-------C
Confidence 445666665554443333322 34 89999999864 21 6
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
+.+.+++.+++.+ ...|++..|..+||++++++++ +++++|++|+|+++++..+++.+. ++||+|+++
T Consensus 41 ~~v~~a~~~~~~~-----~~~y~~~~~~~~l~~~la~~~~------~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~Vl~~ 108 (381)
T 1v2d_A 41 PFLLEAVRRALGR-----QDQYAPPAGLPALREALAEEFA------VEPESVVVTSGATEALYVLLQSLV-GPGDEVVVL 108 (381)
T ss_dssp HHHHHHHHHHTTT-----SCSCCCTTCCHHHHHHHHHHHT------SCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEE
T ss_pred HHHHHHHHHHHHH-----hcCCCCCCCCHHHHHHHHHhcC------CChhhEEEcCChHHHHHHHHHHhC-CCCCEEEEc
Confidence 8888888888764 2368888889999999999974 567899999999999999999998 899999999
Q ss_pred CCcCcchHHHHHHhCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHGGTLVPYYLD--EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
+|+|+.+...++..|.+++.++++ ++ ++.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|
T Consensus 109 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~~~ 181 (381)
T 1v2d_A 109 EPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTP------RTRALLLNTPMNPTGLVFGERELEAIARLA 181 (381)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHHHhcCc------CCEEEEECCCCCCCCCccCHHHHHHHHHHH
Confidence 999999999999999999999986 33 478999999998865 799999999999999999999999999999
Q ss_pred HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
++||+++|+||+|.++.+ |. ...++..+ . . ..++++.||||.+ |++|+|+||+++ ++++++.+...
T Consensus 182 ~~~~~~li~De~~~~~~~-g~-~~~~~~~~---~----~-~~~~~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~ 247 (381)
T 1v2d_A 182 RAHDLFLISDEVYDELYY-GE-RPRRLREF---A----P-ERTFTVGSAGKRL-EATGYRVGWIVG---PKEFMPRLAGM 247 (381)
T ss_dssp HHTTCEEEEECTTTTCBS-SS-CCCCHHHH---C----T-TTEEEEEEHHHHT-TCGGGCCEEEEC---CTTTHHHHHHH
T ss_pred HHcCCEEEEEcCcccccc-CC-CCCCHHHh---c----C-CCEEEEeechhhc-CCcccceEEEEe---CHHHHHHHHHH
Confidence 999999999999999887 42 33444443 1 1 2468899999998 789999999998 88888888776
Q ss_pred hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCH
Q 009517 380 AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPE 458 (533)
Q Consensus 380 ~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~ 458 (533)
.. .+++++++.|.++..+|+.. .+.+++++++++++++++++.+.|++. |+.++.+++++|+|++++ .
T Consensus 248 ~~~~~~~~~~~~~~a~~~~l~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~ 316 (381)
T 1v2d_A 248 RQWTSFSAPTPLQAGVAEALKLA--------RREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVPEGTYFLMAELP--G 316 (381)
T ss_dssp HHHHTSSCCHHHHHHHHHHHHHH--------HHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCSBSSEEEEECT--T
T ss_pred HhhcccCCCcHHHHHHHHHHhCc--------ccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecCCCcceEEEEecC--h
Confidence 54 56788999998888887421 012446778888999999999999996 999999999999997654 1
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-CCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 459 KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-PGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
. + +..+++++||.+.||..|+.. .+.++|||+++.++++|++++++|++++++.++
T Consensus 317 ----------~--~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 317 ----------W--D---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp ----------C--C---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC-----
T ss_pred ----------H--h---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhccc
Confidence 1 1 446778899999999988741 234599999988888999999999999887654
No 53
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=7.7e-44 Score=371.03 Aligned_cols=339 Identities=15% Similarity=0.221 Sum_probs=275.5
Q ss_pred HHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCC---EEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND---IFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
++++.+++... ....|++..|..+||+++|+++.+.+ ..+++++ |++|+|+++|+..+++.++ ++||+|+++
T Consensus 69 ~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~ 143 (430)
T 2x5f_A 69 LDAMFNDLTPD---EIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNALTHGLSLVGDLFV-NQDDTILLP 143 (430)
T ss_dssp HHTTBSSCCGG---GTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESHHHHHHHHHHHHHC-CTTCEEEEE
T ss_pred HHHHHHhcCcc---cccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCCchHHHHHHHHHHh-CCCCEEEEc
Confidence 55554444320 25679998899999999999998764 6677888 9999999999999999998 899999999
Q ss_pred CCcCcchHHHHHH-hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIAL-HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 222 ~p~~~~~~~~~~~-~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+|+|+++...++. .|++++.+++++++ |++|+++|++++++. +.++++|++++||||||.+++.+++++|+++|+
T Consensus 144 ~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 219 (430)
T 2x5f_A 144 EHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIK 219 (430)
T ss_dssp SSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHH
Confidence 9999999999999 99999999987643 789999999999762 236899999999999999999999999999999
Q ss_pred H-----cCCEEEEccccccccccCCCCcccHH-HHHhhcCCCCCC-ceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 301 K-----EGLVLLADEVYQENVYVPEKKFHSFK-KVSRSMGYGEKD-ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 301 ~-----~~~~lI~De~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+ ||+++|+||+|.++.+++. ++.++. .+. +. .++ +.+|++.||||.+ |++|+|+||+++.+.+++++
T Consensus 220 ~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~-~~---~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~ 293 (430)
T 2x5f_A 220 ALANKGTKVIAVVDDAYYGLFYEDV-YTQSLFTALT-NL---HSNAILPIRLDGATKEF-FAWGFRVGFMTFGTSDQTTK 293 (430)
T ss_dssp HHHHTTCEEEEEEECTTTTCBCSSS-CCSCHHHHHH-TT---CCTTEEEEEEEEHHHHT-TCGGGCCEEEEEBCCCHHHH
T ss_pred hhhhccCCEEEEEehhcccccCCcc-cchHHHHHHh-hc---cCCcceEEEEEecccCC-CCCCCCeEEEEEecCCHHHH
Confidence 9 9999999999999988653 344544 331 11 111 1279999999999 88999999998633378888
Q ss_pred HHHHHhhh-----ccccCChHHHHHHHHHcC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCceEec
Q 009517 374 EQIYKVAS-----VNLCSNISGQILASLVMS-PPKVGDESYESYCAERDGILSSLARRAKTLEDAFN----SLEGITCNK 443 (533)
Q Consensus 374 ~~l~~~~~-----~~~~~~~~~q~a~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~g~~~~~ 443 (533)
+.+..... .++++++++|.++..+|+ +. .+.+++++++++++++++.+.+.|+ +. |+.+..
T Consensus 294 ~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~ 364 (430)
T 2x5f_A 294 EVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK--------QFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYD 364 (430)
T ss_dssp HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH--------HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECC
T ss_pred HHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh--------HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeC
Confidence 88876543 457889999999999885 42 2555667789999999999999998 56 889999
Q ss_pred CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHH
Q 009517 444 AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTD 522 (533)
Q Consensus 444 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~ 522 (533)
+++|+|+|++++ . . +...++..+++++||.+.|| +.++|||+++ .++++|++++++|++
T Consensus 365 ~~~g~~~~~~~~-~-----------~-~~~~~~~~l~~~~gi~v~~g-------~~~~iRis~~~~~~e~i~~~~~~l~~ 424 (430)
T 2x5f_A 365 FNSGYFMAIKVH-D-----------V-DPEALRKHLIDKYSIGVIAL-------NATDIRIAFSCVEKDDIPHVFDSIAK 424 (430)
T ss_dssp CCBSSEEEEEES-S-----------S-CHHHHHHHHHHHHCEECEEC-------SSSEEEEEGGGSCGGGHHHHHHHHHH
T ss_pred CCceEEEEeCCC-C-----------C-CHHHHHHHHHHhCCEEEecC-------CCCeEEEEEecCCHHHHHHHHHHHHH
Confidence 999999997765 1 1 23455556665589999997 2238999998 889999999999999
Q ss_pred HHHHH
Q 009517 523 FHKNF 527 (533)
Q Consensus 523 ~l~~~ 527 (533)
+++++
T Consensus 425 ~l~~~ 429 (430)
T 2x5f_A 425 AIDDL 429 (430)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98764
No 54
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.7e-44 Score=371.66 Aligned_cols=328 Identities=16% Similarity=0.190 Sum_probs=267.1
Q ss_pred CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH--HHHHHHhccC--C----------CCeEEEcCCc
Q 009517 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV--HMMMQLLIRS--E----------NDGILCPIPQ 224 (533)
Q Consensus 159 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al--~~~~~~l~~~--~----------gd~Vlv~~p~ 224 (533)
....|++..|..+||+++|++++ +++++|++|+|+++++ ..+++.++ + + ||+|++++|+
T Consensus 70 ~~~~Y~~~~g~~~lr~~ia~~~~------~~~~~i~~t~G~~~al~~~~~~~~l~-~~~~g~~~~~~~~~gd~V~v~~p~ 142 (427)
T 3ppl_A 70 DVRNYGGLDGIVDIRQIWADLLG------VPVEQVLAGDASSLNIMFDVISWSYI-FGNNDSVQPWSKEETVKWICPVPG 142 (427)
T ss_dssp BTTSSCCSSCCHHHHHHHHHHHT------SCGGGEEECSSCHHHHHHHHHHHHHH-HCCTTCSSCGGGSSCCEEEEEESC
T ss_pred hhcCCCCCCCcHHHHHHHHHHhC------CCcceEEEeCCcHHHHHHHHHHHHHh-ccCCcccccccCCCCCEEEEcCCC
Confidence 36789999999999999999984 7789999999999999 58888877 5 5 8999999999
Q ss_pred CcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHc
Q 009517 225 YPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFC-KKE 302 (533)
Q Consensus 225 ~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~-~~~ 302 (533)
|..|...++..|++++.+|++++ ++|++.|+++++. +++++|+++ +||||||.+++.+++++|+++| ++|
T Consensus 143 y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~ 214 (427)
T 3ppl_A 143 YDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAP 214 (427)
T ss_dssp CHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST
T ss_pred cHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcC
Confidence 99999999999999999999864 5999999999853 278999877 8899999999999999999999 999
Q ss_pred CCEEEEccccccccccCCC-CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh
Q 009517 303 GLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS 381 (533)
Q Consensus 303 ~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~ 381 (533)
|++||+||+|.++.|++.. +..++..+.... +...++|++.||||++ ++|+|+||+++ ++++++.+.....
T Consensus 215 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~S~SK~~--~~G~r~G~~~~---~~~l~~~~~~~~~ 286 (427)
T 3ppl_A 215 DFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAA---GNPNRFWAFTSTSKIT--LAGAGVSFFLT---SAENRKWYTGHAG 286 (427)
T ss_dssp TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT---TCTTSEEEEEESTTTS--CTTSSCEEEEC---CHHHHHHHHHHHH
T ss_pred CCEEEEECCCcccccCCCCCCccchhhhhhcc---CCCCcEEEEechhhcc--CcCccEEEEEc---CHHHHHHHHHHhh
Confidence 9999999999998887642 234555543221 1234689999999974 58999999998 9999999988765
Q ss_pred -ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCceEecCCceeEEecccCC
Q 009517 382 -VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LEGITCNKAEGAMYLFPRIQL 456 (533)
Q Consensus 382 -~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~gg~~~~~~~~~ 456 (533)
.+++++++.|.++..+|++. ..+.++++++++.++++++.+.+.|.+ ++++.+..|++|+|+|++++.
T Consensus 287 ~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~ 359 (427)
T 3ppl_A 287 IRGIGPNKVNQLAHARYFGDA-------EGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP 359 (427)
T ss_dssp HHCSCCCHHHHHHHHHHHCSH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECST
T ss_pred cccCCCCHHHHHHHHHHHhCh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCc
Confidence 67889999999999998741 124455677888888888888877755 336888899999999977651
Q ss_pred CHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-CCCCCC--CCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 457 PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-GSGFGQ--VPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g~~f~~--~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
. +...+ .+.|.++||.+.| |..|+. ..+.++|||+++ .++++|++++++|++++++...+
T Consensus 360 ~-------------~~~~~-~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~~~~~ 423 (427)
T 3ppl_A 360 G-------------TASRV-AELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLAAAE 423 (427)
T ss_dssp T-------------CHHHH-HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-------------hHHHH-HHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1 23333 3567789999999 556642 134569999998 58899999999999999987654
No 55
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=2.1e-43 Score=365.58 Aligned_cols=384 Identities=15% Similarity=0.131 Sum_probs=291.7
Q ss_pred CcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCC-cCCCCCCchHHHHHHhhcCCCCCCCcccccCCC
Q 009517 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNP-QSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (533)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~ 140 (533)
.+++...+++++..+...+.+. .+++ +|||+.|.| +..+. ..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~i~l~~g~~~~~~~~-------------------------~~~ 49 (412)
T 1ajs_A 6 FAEVPQAQPVLVFKLIADFRED--PDPR---------KVNLGVGAYRTDDCQ-------------------------PWV 49 (412)
T ss_dssp TTTCCCCCCCHHHHHHHHHHTC--CCTT---------CEECCSCCCCCTTSC-------------------------CCC
T ss_pred hhhCcccCCchHHHHHHHHhhc--CCCC---------ceeeccceecCCCCC-------------------------ccc
Confidence 3455566666655555444432 1223 999999997 32111 012
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHH--HhccCCC-
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQ--LLIRSEN- 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~--~l~~~~g- 215 (533)
++.+.+++.+.+.+. . ....|.+..|..+||+++++++.+.+|..+++++|++ |+|+++|+..+++ .++ .+|
T Consensus 50 ~~~v~~a~~~~~~~~-~-~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~-~~g~ 126 (412)
T 1ajs_A 50 LPVVRKVEQRIANNS-S-LNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARW-YNGT 126 (412)
T ss_dssp CHHHHHHHHHHHTCT-T-CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH-SSSS
T ss_pred cHHHHHHHHHhhhCh-h-hccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHh-CcCc
Confidence 577888887776331 1 2567989999999999999999766665567899999 9999999999965 344 689
Q ss_pred ----CeEEEcCCcCcchHHHHHHhCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 216 ----DGILCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 216 ----d~Vlv~~p~~~~~~~~~~~~g~~-~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
|+|+++.|+|++|...++..|.+ ++.++++.+++|++|++++++++++. ++++++|++++||||||.+++.+
T Consensus 127 ~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~ 203 (412)
T 1ajs_A 127 NNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVLHACAHNPTGTDPTPE 203 (412)
T ss_dssp SCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHH
T ss_pred CCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHH
Confidence 99999999999999999999999 99999865457889999999999762 23577888899999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCC-CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
++++|+++|++||+++|+||+|+++.+++. ....++..+.. ...++|++.||||.+ |++|+|+||+++...+
T Consensus 204 ~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~ 276 (412)
T 1ajs_A 204 QWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS------EGFELFCAQSFSKNF-GLYNERVGNLTVVAKE 276 (412)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH------TTCCEEEEEECTTTS-CCGGGCEEEEEEECSS
T ss_pred HHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc------cCCcEEEEEeccccc-CCCCcceEEEEEecCC
Confidence 999999999999999999999999887541 01233333321 122579999999999 7889999999862225
Q ss_pred HH----HHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceE
Q 009517 370 AE----VREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITC 441 (533)
Q Consensus 370 ~~----~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~ 441 (533)
++ +++.+..... .+.++++++|.++..+|+.. ..+..|.+++++++++++++++++.+.|+++. ++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 352 (412)
T 1ajs_A 277 PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDP----ELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNH 352 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCc----chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeE
Confidence 65 4555555343 33446999999999888631 11223445678889999999999999999883 3888
Q ss_pred ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHH
Q 009517 442 NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRL 520 (533)
Q Consensus 442 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l 520 (533)
..+++++|+|++++ ..++..+++++||.+.|| +||+++ .+++++++++++|
T Consensus 353 ~~~~~~~~~~~~~~-----------------~~~~~~~l~~~gv~v~~~-----------~Ris~~~~~~~~i~~~~~~l 404 (412)
T 1ajs_A 353 ITDQIGMFSFTGLN-----------------PKQVEYLINQKHIYLLPS-----------GRINMCGLTTKNLDYVATSI 404 (412)
T ss_dssp HHHCCSSEEECCCC-----------------HHHHHHHHHTTCEECCTT-----------SEEEGGGCCTTTHHHHHHHH
T ss_pred EcCCCceEEEeCCC-----------------HHHHHHHHHhCCEEecCC-----------cEEEeeeCCHHHHHHHHHHH
Confidence 88999999996543 123557788899999973 499998 6999999999999
Q ss_pred HHHHHH
Q 009517 521 TDFHKN 526 (533)
Q Consensus 521 ~~~l~~ 526 (533)
++++++
T Consensus 405 ~~~l~~ 410 (412)
T 1ajs_A 405 HEAVTK 410 (412)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998865
No 56
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=3.7e-44 Score=370.97 Aligned_cols=372 Identities=17% Similarity=0.151 Sum_probs=278.2
Q ss_pred cccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCC-cCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNP-QSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
+++...+++ +++.....++.... +++|+|++|.| +. +. |
T Consensus 18 ~~~~~~~~~---~i~~~~~~~~~~~~--------~~~i~l~~g~~~d~----------------------~~-------~ 57 (409)
T 4eu1_A 18 GPGSMGKPD---PILGLGQDFRMDPA--------KRKVNLSIGVYRDD----------------------AD-------Q 57 (409)
T ss_dssp ------------CHHHHHHHHHHCCC--------SSCEECCCSSCCCT----------------------TS-------C
T ss_pred hcCCCCCCC---hHHHHHHHHhhCCC--------cCceeeeeeEEECC----------------------CC-------C
Confidence 345555554 46677777765322 24999999998 53 11 2
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEE--EcCChHHHHHHHHH---HhccCCCC
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF--LTDGASPAVHMMMQ---LLIRSEND 216 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~~~---~l~~~~gd 216 (533)
+.+.+++.++... ....|.+..|..+||+++++++.+..+.++++++|. .+.|+++++..+.. .+. ++||
T Consensus 58 ~~v~~a~~~a~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~-~~gd 132 (409)
T 4eu1_A 58 PFVLECVKQATLG----TNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFV-ANCN 132 (409)
T ss_dssp CCCCHHHHTCCCC----SCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTS-SSCC
T ss_pred EeecHHHHhcCcc----ccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhc-CCCC
Confidence 3344454444221 467899999999999999999854332223367884 58999999887644 344 6899
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+|++++|+|.+|...++..|++++.+++..+++|++|+++|++++++. ..+++++++++||||||.+++.+++++|+
T Consensus 133 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~p~NPtG~~~~~~~l~~i~ 209 (409)
T 4eu1_A 133 RIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKA---PEGSVILVHACAHNPTGVDPTHDDWRQVC 209 (409)
T ss_dssp EEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999865567899999999999752 11456677789999999999999999999
Q ss_pred HHHHHcCCEEEEccccccccccCCC-CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEE--EEecCCHH--
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM--EVTGFSAE-- 371 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v--~~~~~~~~-- 371 (533)
++|++||+++|+||+|+++.+++.. ...++..+. + ...++|+++||||++ |++|+|+||+ ++ .+++
T Consensus 210 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-~-----~~~~~i~~~S~SK~~-g~~G~riG~~~~v~--~~~~~~ 280 (409)
T 4eu1_A 210 DVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLV-D-----MVPNLIVAQSFSKNF-GLYGHRCGALHIST--ASAEEA 280 (409)
T ss_dssp HHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-T-----TSSCCEEEEECTTTS-SCGGGCCEEEEEEC--SSHHHH
T ss_pred HHHHhCCcEEEEeccccccccCCcccchHHHHHHH-h-----hCCcEEEEecCcccc-cCccCCceEEEEEe--CCHHHH
Confidence 9999999999999999998885410 112332321 1 223578999999999 8999999997 43 3677
Q ss_pred --HHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----ceEecC
Q 009517 372 --VREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG----ITCNKA 444 (533)
Q Consensus 372 --~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~ 444 (533)
+++.+..... .+.+++.++|.++..+|+++ ...+.|.+++++++++++++++++.+.|+++ | +.+..|
T Consensus 281 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 355 (409)
T 4eu1_A 281 KRLVSQLALLIRPMYNNPPLYGAWVVSSILKDP----QLTALWKKELKQMSSRIAEVRKRLVSELKAC-GSVHDWSHIER 355 (409)
T ss_dssp HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCSCCHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcceecC
Confidence 6666666554 56778899999999888642 2334566778889999999999999999987 4 788889
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHH
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~ 523 (533)
++++|+|++++ ..++..+++++||.+.|| .||+++ .++++|++++++|+++
T Consensus 356 ~~~~~~~~~~~-----------------~~~~~~ll~~~gv~v~p~-----------~Ri~~~~~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 356 QVGMMAYTGLT-----------------REQVELLRSEYHIYMTLN-----------GRAAVSGLNSTNVEYVSQAIHNV 407 (409)
T ss_dssp SCSSEEECCCC-----------------HHHHHHHHHHHCEECCTT-----------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CceEEEEeCCC-----------------HHHHHHHHHcCCEEEcCC-----------CEEEEEecCHhhHHHHHHHHHHH
Confidence 99999996543 123567788889999984 289997 7888899999999887
Q ss_pred H
Q 009517 524 H 524 (533)
Q Consensus 524 l 524 (533)
+
T Consensus 408 l 408 (409)
T 4eu1_A 408 T 408 (409)
T ss_dssp H
T ss_pred h
Confidence 5
No 57
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=1.4e-43 Score=365.44 Aligned_cols=382 Identities=21% Similarity=0.301 Sum_probs=282.1
Q ss_pred cCcccccCcc-ccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCC
Q 009517 61 LNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGL 139 (533)
Q Consensus 61 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~ 139 (533)
+++++..+++ ..+..+..+........ .+ +++|+|+.|.++. +.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~i~l~~~~~~~----------------------~~------ 47 (400)
T 3asa_A 3 RNPHFVSLTKNYLFADLQKRVAQFRLEN-PQ------HTVINLSIGDTTQ----------------------PL------ 47 (400)
T ss_dssp CCHHHHTCCCCCHHHHHHHHHHHHHHHC-TT------SCCEECSSCCCCC----------------------CC------
T ss_pred cchhhhccCCcccHHHHHHHHHHhhhhc-CC------CceEeccCCCCCC----------------------CC------
Confidence 3566666654 33555555555544321 11 2399999998763 21
Q ss_pred CCHHHHHHHHHHHhcCCC-CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeE
Q 009517 140 FSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~V 218 (533)
|+.+++++.+++..... .....|++..|..+||+++++++. +|. +++++|++|+|+++++..++.. + .+||+|
T Consensus 48 -~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~~-~-~~gd~V 121 (400)
T 3asa_A 48 -NASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLSF-F-GPNQTV 121 (400)
T ss_dssp -CHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHHH-H-CSSCEE
T ss_pred -CHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHHH-c-CCCCEE
Confidence 68888888887764211 024579888899999999999974 454 6788999999999999997755 4 689999
Q ss_pred EEcCCcCcchHHHHHHhCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 219 LCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 219 lv~~p~~~~~~~~~~~~g~~-~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
+++.|+|+++...++..|.+ ++.+++++++++..|++.+ + ++++|++++||||||.+++.+++++|++
T Consensus 122 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~ 190 (400)
T 3asa_A 122 AIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPED-----T------HIDILCLCSPNNPTGTVLNKDQLRAIVH 190 (400)
T ss_dssp EEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTT-----C------CCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhc-----c------CccEEEEeCCCCCCCCcCCHHHHHHHHH
Confidence 99999999999999999998 9999987655555554321 2 6899999999999999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH-----
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV----- 372 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~----- 372 (533)
+|+++|+++|+||+|.++.+++. ...++..+ . ....++|++.||||++ |++|+|+||+++ ++++
T Consensus 191 ~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~----~--~~~~~~i~~~s~sK~~-g~~GlriG~~~~---~~~~~~~~~ 259 (400)
T 3asa_A 191 YAIEHEILILFDAAYSTFISDPS-LPKSIFEI----P--DARFCAIEINSFSKPL-GFAGIRLGWTVI---PQELTYADG 259 (400)
T ss_dssp HHHHTTCEEEEECTTGGGCCCTT-SCSSGGGS----T--TGGGTEEEEEECCGGG-TTTTCCCEEEEC---CTTCBCTTS
T ss_pred HHHHcCCEEEEEchhhhhhcCCC-CCCchhhC----C--CCCCceEEEecchhhc-CCcchheeEEee---Chhhccchh
Confidence 99999999999999999877553 12233222 0 0122578999999999 889999999987 7776
Q ss_pred --HHHHHHh-hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcee
Q 009517 373 --REQIYKV-AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAM 448 (533)
Q Consensus 373 --~~~l~~~-~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~ 448 (533)
+..+... .. ...++++++|.++..+|++. ++++++++++++++++.+.|+++ |+.+..+.+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------------~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 326 (400)
T 3asa_A 260 HFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL------------PQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAP 326 (400)
T ss_dssp CBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT------------TTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSS
T ss_pred hhHHHHHHHHhccCccCCChHHHHHHHHHhCcH------------HHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCce
Confidence 5555432 22 23468999999988887421 34567788899999999999998 89988888899
Q ss_pred EEecc-cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 449 YLFPR-IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 449 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
|+|++ ++ .+ . +...++..+++++||.+.||..|+ ..+.++|||++..++++|++++++|+++++++
T Consensus 327 ~~~~~~~~--~~---------~-~~~~~~~~l~~~~gv~v~~g~~f~-~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 327 YLWVKPTQ--AN---------I-SDRDLFDFFLREYHIAITPGIGFG-RSGSGFVRFSSLGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp EEEEECCC--TT---------C-CTTTHHHHHHHHHSEECEEGGGGC-GGGTTCEEEECCSCHHHHHHHHHHHHC-----
T ss_pred EEEEeccC--CC---------C-CHHHHHHHHHHhCCEEEeChhHhC-CCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 99976 43 11 1 122345567777899999999997 33455899997788999999999999999988
Q ss_pred HHHh
Q 009517 528 MDKF 531 (533)
Q Consensus 528 ~~~~ 531 (533)
..++
T Consensus 394 ~~~~ 397 (400)
T 3asa_A 394 SHHH 397 (400)
T ss_dssp ----
T ss_pred hhcc
Confidence 7654
No 58
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=3.2e-43 Score=365.48 Aligned_cols=362 Identities=15% Similarity=0.207 Sum_probs=282.1
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHH--HHHhcCCCCCcccc-CCCcccHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAW--QILDQIPGRATGAY-SHSQGIKGLRDT 175 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~--~~~~~~~~~~~~~Y-~~~~G~~~lr~a 175 (533)
+|||+.|.|+. ..++. |+.+.+++. +.+.. ......| ++..|..+||++
T Consensus 27 ~i~l~~g~p~~-------------------~~~~~-------~~~v~~a~~~~~~~~~--~~~~~~Yp~~~~g~~~lr~~ 78 (423)
T 3ez1_A 27 NLNMQRGQPAD-------------------ADFDL-------SNGLLTVLGAEDVRMD--GLDLRNYPGGVAGLPSARAL 78 (423)
T ss_dssp CEESCCCCCCH-------------------HHHHT-------TGGGGGSCCGGGCEET--TEETTSSCSCTTCCHHHHHH
T ss_pred eEecCCCCCCh-------------------HhCCC-------cHHHHHHHhhhHHhhc--chhhhCCCCCCCChHHHHHH
Confidence 79999999982 00022 456666664 33331 1124789 889999999999
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHH--HHHHHhccC--C---------CCeEEEcCCcCcchHHHHHHhCCeEEEE
Q 009517 176 IAAGIEARDGFPADPNDIFLTDGASPAVH--MMMQLLIRS--E---------NDGILCPIPQYPLYSASIALHGGTLVPY 242 (533)
Q Consensus 176 ia~~~~~~~g~~~~~~~i~~t~G~~~al~--~~~~~l~~~--~---------gd~Vlv~~p~~~~~~~~~~~~g~~~~~v 242 (533)
+|++++ +++++|++|+|+++++. .+++.++ . + ||+|+++.|+|.++...++..|++++.+
T Consensus 79 ia~~~~------~~~~~i~~t~G~~~al~~~~~~~~l~-~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 151 (423)
T 3ez1_A 79 FAGYLD------VKAENVLVWNNSSLELQGLVLTFALL-HGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV 151 (423)
T ss_dssp HHHHTT------SCGGGEEECSSCHHHHHHHHHHHHHH-TCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEE
T ss_pred HHHHhC------CChhhEEEeCCcHHHHHHHHHHHHHh-ccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEec
Confidence 999984 67889999999999998 8888887 6 7 5999999999999999999999999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEccccccccccC-
Q 009517 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFC-KKEGLVLLADEVYQENVYVP- 319 (533)
Q Consensus 243 ~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~-~~~~~~lI~De~y~~~~~~~- 319 (533)
+++.+ ++|+++|+++++. .+++++|+++ +||||||.+++.+++++|+++| ++||++||+||+|..+.|.+
T Consensus 152 ~~~~~---g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~ 224 (423)
T 3ez1_A 152 DMQSD---GPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEE 224 (423)
T ss_dssp EEETT---EECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSS
T ss_pred cCCCC---CCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCC
Confidence 99864 6999999999962 1279999766 8999999999999999999999 99999999999999766654
Q ss_pred C-CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHH
Q 009517 320 E-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLV 397 (533)
Q Consensus 320 ~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~ 397 (533)
+ .+..++..+.... +...++|++.||||++ ++|+|+||+++ ++++++.+..... .+++++++.|.++..+
T Consensus 225 ~~~~~~~~~~~~~~~---~~~~~~i~~~S~sK~~--~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 296 (423)
T 3ez1_A 225 DRAEPVNFVVLARDA---GYPDRAFVFASTSKIT--FAGAGLGFVAS---SEDNIRWLSKYLGAQSIGPNKVEQARHVKF 296 (423)
T ss_dssp SCCCCCCHHHHHHHH---TCTTSEEEEEESTTTS--CSSSSCEEEEE---CHHHHHHHHHHHHHSCSCCCHHHHHHHHHH
T ss_pred CCCCCcchhhhhhcc---CCCCeEEEEeCchhhc--cCCcceEEEEe---CHHHHHHHHHHHhhhccCCCHHHHHHHHHH
Confidence 2 2344555543322 1233689999999974 48999999998 9999999988775 6788999999999988
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CC-CceEecCCceeEEecccCCCHHHHHHHHhcCCCCh
Q 009517 398 MSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LE-GITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPD 472 (533)
Q Consensus 398 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (533)
|++. ...+.++++++++.++++++.+.+.|.+ ++ ++.+..|++|+|+|++++.. +.
T Consensus 297 l~~~------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-------------~~ 357 (423)
T 3ez1_A 297 LTEY------PGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-------------VA 357 (423)
T ss_dssp HHHS------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-------------CH
T ss_pred HHhc------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-------------cH
Confidence 8630 0123455666777777777776666644 53 37888899999999776521 12
Q ss_pred HHHHHHHHHccceEEEc-CCCCCC--CCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 473 AFYCRRLLNATGIVLVP-GSGFGQ--VPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 473 ~~~~~~ll~~~gV~v~p-g~~f~~--~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
. .+.++|.++||.+.| |..|+. ..+.++|||+++ .++++|++++++|++++++...+
T Consensus 358 ~-~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~~ 418 (423)
T 3ez1_A 358 D-RVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATEE 418 (423)
T ss_dssp H-HHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2 344667889999999 777753 234569999998 58999999999999999987654
No 59
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=4.5e-43 Score=363.49 Aligned_cols=325 Identities=20% Similarity=0.273 Sum_probs=252.6
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC-----eEEEc-CCcCcchHHHHHH
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND-----GILCP-IPQYPLYSASIAL 234 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd-----~Vlv~-~p~~~~~~~~~~~ 234 (533)
..|++..|..+||+++|+++.+.+|+.+++++|++|+|+++|+.++++.++ ++|| +|+++ +|+|++|...+..
T Consensus 69 ~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~-~~gd~~~~~~vi~~~~p~~~~~~~~~~~ 147 (417)
T 3g7q_A 69 CNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFA-GRRADGSTKKVLFPLAPEYIGYADSGLE 147 (417)
T ss_dssp HSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-BC----CCBEEEESSCCCHHHHHC----
T ss_pred eccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHc-CCCccCCcceEEEeCCCccccchhhccc
Confidence 479999999999999999999999999999999999999999999999998 7887 89997 9999999876543
Q ss_pred h------CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 235 H------GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 235 ~------g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
. +..+..++.+. .+|.+|+++|+ +++ ++++|++++||||||.+++.+++++|+++|++||+++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~~------~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 148 DDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IGE------ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp -CCEEECCCEEEEEGGGE-EEEECCGGGCC--CCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhccccCcccccCCcc-cccccCHHHhc--ccc------CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 2 23344444321 14678999888 443 799999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCC
Q 009517 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSN 387 (533)
Q Consensus 309 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~ 387 (533)
||+|..+.. + ..+.. ... +...++|++.|||| + +++|+|+||+++ ++++++.+..... .+++++
T Consensus 219 De~~~~~~~-~-~~~~~---~~~-----~~~~~~i~~~s~sK-~-~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~ 283 (417)
T 3g7q_A 219 DNAYGVPFP-G-IIFSE---ARP-----LWNPNIILCMSLSK-L-GLPGSRCGIIIA---NDKTITAIANMNGIISLAPG 283 (417)
T ss_dssp ECTTCTTTT-C-CBCSC---CCC-----CCCTTEEEEEESGG-G-TCTTSCCEEEEC---CHHHHHHHHHHHHHHCCCCC
T ss_pred eCCCccccc-c-ccccc---ccc-----CCCCCEEEEEechh-c-cCCCcceEEEEe---CHHHHHHHHHhhcceeeCCC
Confidence 999986321 1 01111 001 11235799999999 6 679999999998 9999999988765 667889
Q ss_pred hHHHHHHHHHcCCCCCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhc-CC--CceEecCCceeEEecccCCCHHHHHH
Q 009517 388 ISGQILASLVMSPPKVGDESYESYCAERDG-ILSSLARRAKTLEDAFNS-LE--GITCNKAEGAMYLFPRIQLPEKAIKA 463 (533)
Q Consensus 388 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~gg~~~~~~~~~~~~~~~~ 463 (533)
+++|.++..++++.. +.++..+ +++.++++++.+.+.|.+ ++ ++.+..|++|+|+|++++..
T Consensus 284 ~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~------ 349 (417)
T 3g7q_A 284 GMGPAMMCEMIKRND--------LLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDL------ 349 (417)
T ss_dssp SHHHHHHHHHHHTTC--------HHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTC------
T ss_pred cHHHHHHHHHHcCcc--------hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCC------
Confidence 999999999987543 3344444 777888899888888876 45 57888899999999766521
Q ss_pred HHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC------CceEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 464 AEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG------TWHFRCTILPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 464 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g------~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+. +...++. .|.++||.+.||..|+.... .++||||++.++++|++++++|+++++++.++
T Consensus 350 ----~~-~~~~l~~-~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~~~~ 416 (417)
T 3g7q_A 350 ----PI-TTELLYQ-RLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWRE 416 (417)
T ss_dssp ----SS-CHHHHHH-HHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CC-CHHHHHH-HHHHCCEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHhc
Confidence 01 2344444 45778999999999864221 46999999888899999999999999988654
No 60
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=2e-43 Score=376.82 Aligned_cols=347 Identities=18% Similarity=0.255 Sum_probs=265.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHH-HhhcCCCC---CCCCEEEcCChHHHHHHHHHHh-----c
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGI-EARDGFPA---DPNDIFLTDGASPAVHMMMQLL-----I 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~-~~~~g~~~---~~~~i~~t~G~~~al~~~~~~l-----~ 211 (533)
++.+++++.+.+. ...|++..|..+||+++++++ .++++... ++++|++|+|+++++..+++++ +
T Consensus 118 ~~~~~~al~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~ 191 (546)
T 2zy4_A 118 PAAFLHEMVDGIL------GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLL 191 (546)
T ss_dssp HHHHHHHHHHHHH------TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSS
T ss_pred ChHHHHHHHHhhh------cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcC
Confidence 4566777666653 247999999999999988766 44444322 4689999999999999999883 5
Q ss_pred cCCCCeEEEcCCcCcchHHHHHHh--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 212 RSENDGILCPIPQYPLYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~~~~~~~~--g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
++||+|++++|+|+.|...+... |++++.++++++++|.+|++.|+++++. ++++|++++||||||.+++.
T Consensus 192 -~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~ 264 (546)
T 2zy4_A 192 -KAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQ 264 (546)
T ss_dssp -CTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCH
T ss_pred -CCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCH
Confidence 79999999999999999886654 6899999998877899999999887754 79999999999999999999
Q ss_pred HHHHHHHHHH--HHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 290 ENQRAIVDFC--KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 290 ~~l~~i~~l~--~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+++++|+++| +++|++||+||+|.+|.++ ..++... .+ .++|++.||||++ |++|+|+||+++
T Consensus 265 ~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~----~~s~~~~-------~~-~~~i~~~S~SK~~-g~~GlRiG~~~~-- 329 (546)
T 2zy4_A 265 RSLERVRNIVAEHRPDLMILTDDVYGTFADD----FQSLFAI-------CP-ENTLLVYSFSKYF-GATGWRLGVVAA-- 329 (546)
T ss_dssp HHHHHHHHHHHHTCTTCEEEEECTTGGGSTT----CCCHHHH-------CG-GGEEEEEESTTTT-TCGGGCEEEEEE--
T ss_pred HHHHHHHHHHHhccCCcEEEEeCcchhhccc----CcCHHHh-------CC-CCEEEEEeCcccc-CCCCcceEEEEE--
Confidence 9999999999 7889999999999998752 2344332 22 3589999999998 899999999998
Q ss_pred CCHH-HHHHHHHh-------------h------------------------hccccCChHHHHHH-----HHHcCCCCCC
Q 009517 368 FSAE-VREQIYKV-------------A------------------------SVNLCSNISGQILA-----SLVMSPPKVG 404 (533)
Q Consensus 368 ~~~~-~~~~l~~~-------------~------------------------~~~~~~~~~~q~a~-----~~~L~~~~~~ 404 (533)
+++ +++.+... . ..+.+.+.+.|.++ .+++++.+
T Consensus 330 -~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~-- 406 (546)
T 2zy4_A 330 -HQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEAD-- 406 (546)
T ss_dssp -ESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTC--
T ss_pred -CCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccH--
Confidence 554 76665311 0 12245677777764 34454322
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCC------CHHHHHHHHhcCCCChHHHHHH
Q 009517 405 DESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL------PEKAIKAAEAEKTVPDAFYCRR 478 (533)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 478 (533)
.+.+.+++.|+++++.+.+.|. + ++.+.+++++||+|++++. ..+...-.. .+. ++..++.+
T Consensus 407 --------~~~~~~r~~~~~r~~~l~~~L~-~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~-~~~-~~~~~l~~ 474 (546)
T 2zy4_A 407 --------EYKHTLKQLIRRRETTLYRELG-M-PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAV-KQS-STGDMLFR 474 (546)
T ss_dssp --------HHHHHHHHHHHHHHHHHHGGGT-S-SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHH-HHC-CHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHHHHhcC-C-CcccCCCCeeEEEEEEHHHhhcccccHHHHHHhh-ccC-CHHHHHHH
Confidence 3456778889999999999986 5 5666788999999977641 000000000 011 23445667
Q ss_pred HHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHHHhc
Q 009517 479 LLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMDKFR 532 (533)
Q Consensus 479 ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~~~~ 532 (533)
+++++||.+.||..|+. +.++|||+++ .+++++++++++|+++++++.++|+
T Consensus 475 ll~~~gV~v~pG~~F~~--~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~~~ 527 (546)
T 2zy4_A 475 IADETGIVLLPGRGFGS--NRPSGRASLANLNEYEYAAIGRALRKMADELYAEYS 527 (546)
T ss_dssp HHHHHSCCCEESSCTTC--SSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHCCEEEeCccccCC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999984 3459999998 5888999999999999999988876
No 61
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=9.3e-44 Score=379.24 Aligned_cols=355 Identities=19% Similarity=0.225 Sum_probs=274.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhh-cC-CCCC-CCCEEEcCChHHHHHHHHHH-----hcc
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEAR-DG-FPAD-PNDIFLTDGASPAVHMMMQL-----LIR 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~-~g-~~~~-~~~i~~t~G~~~al~~~~~~-----l~~ 212 (533)
|+++++++.+.+.. ...|.+..|..++|+++++++... ++ ..+. +++|++|+|+++++..+++. ++
T Consensus 117 ~~~~v~a~~~~~~~-----~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~- 190 (533)
T 3f6t_A 117 RDKVVAEWVNGAVA-----NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLL- 190 (533)
T ss_dssp HHHHHHHHHHHHHT-----CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSS-
T ss_pred CcHHHHHHHHHHHh-----CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcc-
Confidence 57788888777764 223448889999999999999766 34 4555 47999999999999999998 56
Q ss_pred CCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCC--CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 213 SENDGILCPIPQYPLYSASIALHGGTLVPYYLDE--ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
++||+|+++.|+|.+|...+...|.+++.++++. +.+|++|+++|++++++ ++++|++++||||||.+++.+
T Consensus 191 ~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~------~~k~v~l~~p~NPtG~~~~~~ 264 (533)
T 3f6t_A 191 KKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP------SIKALIVVNPTNPTSKEFDTN 264 (533)
T ss_dssp CTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT------TEEEEEEESSCTTTCBCCCHH
T ss_pred CCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC------CCeEEEEeCCCCCCccccCHH
Confidence 7999999999999999999999999999999875 56789999999999865 799999999999999999999
Q ss_pred HHHHHHHHHH-HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 291 NQRAIVDFCK-KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 291 ~l~~i~~l~~-~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
++++|+++|+ +||++||+||+|.++.++. .++... .+ .++|++.||||.+ |++|+|+||+++ +
T Consensus 265 ~l~~l~~la~~~~~~~li~De~y~~~~~~~----~~~~~~-------~~-~~~i~~~S~SK~~-g~~G~RiG~l~~---~ 328 (533)
T 3f6t_A 265 ALNAIKQAVEKNPKLMIISDEVYGAFVPNF----KSIYSV-------VP-YNTMLVYSYSKLF-GCTGWRLGVIAL---N 328 (533)
T ss_dssp HHHHHHHHHHHCTTCEEEEECTTGGGSTTC----CCHHHH-------SG-GGEEEEEESHHHH-TCGGGCEEEEEE---E
T ss_pred HHHHHHHHHHhCCCCEEEEcCCccccccCc----cCHhhc-------CC-CCEEEEecCcccC-CCcccceEEEEE---C
Confidence 9999999999 5899999999999987642 233332 12 3689999999999 899999999998 4
Q ss_pred HH-----HHHHH--------------------------------HHhhh-ccccCChHHHHH----HHHHcCCCCCCChh
Q 009517 370 AE-----VREQI--------------------------------YKVAS-VNLCSNISGQIL----ASLVMSPPKVGDES 407 (533)
Q Consensus 370 ~~-----~~~~l--------------------------------~~~~~-~~~~~~~~~q~a----~~~~L~~~~~~~~~ 407 (533)
++ +++.+ ..... .+++++.+.|.+ +..+|... .++.
T Consensus 329 ~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~-~g~~- 406 (533)
T 3f6t_A 329 EKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTS-TNGG- 406 (533)
T ss_dssp SSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTC-BGGG-
T ss_pred cHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhh-cccc-
Confidence 44 33221 22222 456778888887 34445310 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHH-----HHHhcCCCChHHHHHHHHHc
Q 009517 408 YESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIK-----AAEAEKTVPDAFYCRRLLNA 482 (533)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ll~~ 482 (533)
.+.++++++++.|+++++.+.+.|. + ++.+..++++||+|+++..-..... ..-..+ .++..++.+++++
T Consensus 407 --~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~-~~~~~~~~~ll~~ 481 (533)
T 3f6t_A 407 --SDDPYIDIARKLVSERYDQLHDAMQ-A-PKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNN-FEQVDFLLKLAEK 481 (533)
T ss_dssp --TBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHH-CCHHHHHHHHHHH
T ss_pred --chHHHHHHHHHHHHHHHHHHHHhcC-C-CccccCCCceEEEEEehHhhhhhccchHHHHHhhcc-CCHHHHHHHHHHh
Confidence 1235567888999999999999998 6 7888899999999977641000000 000000 1345566788888
Q ss_pred cceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHHHHHHHHhc
Q 009517 483 TGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFHKNFMDKFR 532 (533)
Q Consensus 483 ~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l~~~~~~~~ 532 (533)
+||++.||+.|+.. .++||||++ .++++|++++++|+++++++.++|+
T Consensus 482 ~GV~v~pg~~f~~~--~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~~~ 530 (533)
T 3f6t_A 482 NGVVLVDGVGFGAK--PGELRVSQANLPTEDYALIGKQVLELLKEYYEEFK 530 (533)
T ss_dssp TTSSSCTTEEECSS--TTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEeCCcccCCC--CCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999853 349999998 7999999999999999999998875
No 62
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-42 Score=359.76 Aligned_cols=342 Identities=15% Similarity=0.122 Sum_probs=266.0
Q ss_pred CHHHHHHHHH-HHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHH--HHhccCCC
Q 009517 141 SADSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMM--QLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~-~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~--~~l~~~~g 215 (533)
++.+.+++.+ .+.. . ....|.+..|..+||+++++++.+.+|.++++++|++ |+|+++++..++ ..++ .+|
T Consensus 49 ~~~v~~a~~~~~~~~--~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~-~~g 124 (412)
T 1yaa_A 49 LPSVKAAEKLIHNDS--S-YNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKF-FPD 124 (412)
T ss_dssp CHHHHHHHHHHHTCT--T-CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH-CTT
T ss_pred cHHHHHHHHhhhcCc--c-cccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHh-CCC
Confidence 6788888887 7653 1 2567999999999999999999876676667899999 999999999984 3334 589
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
|+|+++.|+|++|...++..|++++.+++.+++++++|+++|++++++. .+.+.++++++||||||.+++.+++++|
T Consensus 125 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~~~~~~~l~~l 201 (412)
T 1yaa_A 125 KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKA---PEGSIFVLHSCAHNPTGLDPTSEQWVQI 201 (412)
T ss_dssp CCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999832336789999999999762 1124455558999999999999999999
Q ss_pred HHHHHHcCCEEEEccccccccccCC-CCcccHHHHHhhcCCCCCC-ceEEEEecCCccCCCCCCCeeEEEEEec----CC
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPE-KKFHSFKKVSRSMGYGEKD-ISLVSFQSVSKGYYGECGKRGGYMEVTG----FS 369 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~vi~i~S~SK~~~gl~G~riG~v~~~~----~~ 369 (533)
+++|++||+++|+||+|.++.+++. ....++..+.. . .++ .++|++.||||.+ |++|+|+||+++.. .+
T Consensus 202 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~~~~~ 276 (412)
T 1yaa_A 202 VDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVE-K---LSTVSPVFVCQSFAKNA-GMYGERVGCFHLALTKQAQN 276 (412)
T ss_dssp HHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHH-H---TTTTCCEEEEEECTTTS-CCGGGCEEEEEEECCSCTTH
T ss_pred HHHHHHCCCEEEEecccccccCCcccchhHHHHHHHh-c---CCCCcceEEEeccCCCC-CCcCCcceEEEEEecCCCCC
Confidence 9999999999999999999887541 01223323221 1 120 0479999999999 78899999997211 14
Q ss_pred HH----HHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceE
Q 009517 370 AE----VREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITC 441 (533)
Q Consensus 370 ~~----~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~ 441 (533)
++ +++.+..... .+.+++.++|.++..+|++. ...+.|.+++++++++++++++++.+.|++++ ++.+
T Consensus 277 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 352 (412)
T 1yaa_A 277 KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETP----ELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDH 352 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTH
T ss_pred HHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeee
Confidence 55 7777776444 45566899999999888632 12223456778899999999999999999873 3888
Q ss_pred ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHH
Q 009517 442 NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRL 520 (533)
Q Consensus 442 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l 520 (533)
..+++|+|+|++++ ... +..+++++||.+.| ++||+++ .+++++++++++|
T Consensus 353 ~~~~~~~~~~~~~~----------------~~~-~~~~l~~~gi~v~~-----------~~Ris~~~~~~~~i~~~~~~l 404 (412)
T 1yaa_A 353 IVNQCGMFSFTGLT----------------PQM-VKRLEETHAVYLVA-----------SGRASIAGLNQGNVEYVAKAI 404 (412)
T ss_dssp HHHCCSSEEECCCC----------------HHH-HHHHHHHHCEECCT-----------TSEEEGGGCCTTTHHHHHHHH
T ss_pred eccCceEEEeeCCC----------------HHH-HHHHHHhCCEEecc-----------CcEEEEccCCHhHHHHHHHHH
Confidence 88999999996543 122 45777789999986 4699998 6899999999999
Q ss_pred HHHHHH
Q 009517 521 TDFHKN 526 (533)
Q Consensus 521 ~~~l~~ 526 (533)
+++++.
T Consensus 405 ~~~~~~ 410 (412)
T 1yaa_A 405 DEVVRF 410 (412)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 63
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4e-42 Score=350.00 Aligned_cols=331 Identities=14% Similarity=0.145 Sum_probs=274.5
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.+.+ +. |+.+++++.+.+.. ...|++..+ .+||+++|+
T Consensus 32 ~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~-----~~~y~~~~~-~~lr~~la~ 76 (365)
T 3get_A 32 VIKLASNENPF----------------------GT-------PPKAIECLRQNANK-----AHLYPDDSM-IELKSTLAQ 76 (365)
T ss_dssp CEECSSCCCTT----------------------CS-------CHHHHHHHHHHGGG-----TTSCCCTTC-HHHHHHHHH
T ss_pred eEEecCCCCCC----------------------CC-------CHHHHHHHHHHHHh-----hccCCCCCh-HHHHHHHHH
Confidence 99999998764 22 78999999888874 567888776 899999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++ +++++|++|+|+++++..+++.++ ++||+|+++.|+|..+...++..|++++.+++ .+.++ +|+++++
T Consensus 77 ~~~------~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~ 147 (365)
T 3get_A 77 KYK------VQNENIIIGAGSDQVIEFAIHSKL-NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLY 147 (365)
T ss_dssp HHT------CCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHH
T ss_pred HhC------CCcceEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHH
Confidence 984 678899999999999999999998 89999999999999999999999999999998 33467 9999999
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc--cCCCCcccHHHHHhhcCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY--VPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~--~~~~~~~~~~~~~~~~~~~ 336 (533)
+++++ ++++|++++||||||.+++.+++++|+++| ++|+++|+||+|.++.| .+. ...+.......
T Consensus 148 ~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~---- 215 (365)
T 3get_A 148 ETHKD------EIKLIFLCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSK-KHLEPCELIKE---- 215 (365)
T ss_dssp HHTTT------TEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGG-GCCCHHHHHHH----
T ss_pred HHhCC------CCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCc-ccccHhHHhcc----
Confidence 99975 899999999999999999999999999998 57999999999999875 432 22333333222
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
..+++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++|.++..+|+. .++++
T Consensus 216 --~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-----------~~~~~ 277 (365)
T 3get_A 216 --FDNVLYLGTFSKLY-GLGGLRIGYGIA---NANIISAFYKLRA-PFNVSNLALKAAVAAMDD-----------DEFTE 277 (365)
T ss_dssp --CTTEEEEEESSSTT-SCTTTCCEEEEE---CHHHHHHHHHHSC-TTCSCHHHHHHHHHHHTC-----------HHHHH
T ss_pred --CCCEEEEeecchHh-cCcchheEEEEc---CHHHHHHHHHhcC-CCCcCHHHHHHHHHHhCC-----------HHHHH
Confidence 22478999999999 889999999998 9999999887654 367899999999999863 14567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
+++++++++++.+.+.|+++ |+.+.++.|+ |+|++++. . +...+. +.|.++||.+.||..|+
T Consensus 278 ~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~-~~~~~~~~------------~-~~~~~~-~~l~~~gi~v~~g~~~~-- 339 (365)
T 3get_A 278 KTLENNFSQMELYKEFAKKH-NIKIIDSYTN-FITYFFDE------------K-NSTDLS-EKLLKKGIIIRNLKSYG-- 339 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCEECCCSSS-EEEEECSS------------S-CHHHHH-HHHHTTTEECEECGGGT--
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCEECCCCCe-EEEEECCC------------C-CHHHHH-HHHHHCCEEEEECccCC--
Confidence 78889999999999999998 9988777665 57866541 1 234444 44556899999999987
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
.++|||+++ +++++++++++|++++
T Consensus 340 --~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 340 --LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp --CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 339999998 6788999999998875
No 64
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=9.8e-43 Score=355.87 Aligned_cols=327 Identities=20% Similarity=0.341 Sum_probs=275.8
Q ss_pred HHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC
Q 009517 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY 225 (533)
Q Consensus 146 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~ 225 (533)
+++.+.+.. ....|.+..|..+||+++++++. .+++++|++|+|+++|+..++++++ ++||+|+++.|+|
T Consensus 46 ~~~~~~~~~----~~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~ 115 (375)
T 3op7_A 46 EDFYKKLQG----TKLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLI-EPGDHVISLYPTY 115 (375)
T ss_dssp HHHHHHHHT----SCCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESSC
T ss_pred HHHHHHHhc----CCcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCc
Confidence 455555555 36789999999999999999874 2668899999999999999999998 8999999999999
Q ss_pred cchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 009517 226 PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (533)
Q Consensus 226 ~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~ 305 (533)
+++...+...|++++.++++.+++|.+|++++++++++ ++++|++++|+||||.+++.+++++|+++|++||++
T Consensus 116 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~ 189 (375)
T 3op7_A 116 QQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAY 189 (375)
T ss_dssp THHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCE
T ss_pred hhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCE
Confidence 99999999999999999998767788999999999975 799999999999999999999999999999999999
Q ss_pred EEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccc
Q 009517 306 LLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNL 384 (533)
Q Consensus 306 lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~ 384 (533)
+|+||+|.++.+. +..++... .+ +++++.||||++ |++|+|+||+++ ++++++.+..... .++
T Consensus 190 li~De~~~~~~~~---~~~~~~~~-------~~--~~i~~~s~sK~~-~~~G~r~G~v~~---~~~l~~~~~~~~~~~~~ 253 (375)
T 3op7_A 190 ILSDEVYRSFSEL---DVPSIIEV-------YD--KGIAVNSLSKTY-SLPGIRIGWVAA---NHQVTDILRDYRDYTMI 253 (375)
T ss_dssp EEEECCSCCCSSS---CCCCHHHH-------CT--TEEEEEESSSSS-SCGGGCCEEEEC---CHHHHHHHTTTGGGTTS
T ss_pred EEEEccccccccc---CCCchhhh-------cC--CEEEEeEChhhc-CCcccceEEEEe---CHHHHHHHHHHHhhhcc
Confidence 9999999998775 22333222 12 358899999999 789999999998 9999999987765 567
Q ss_pred cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHH
Q 009517 385 CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAA 464 (533)
Q Consensus 385 ~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~ 464 (533)
+++++.+.++..+|+. ..++++++++.++++++.+.+.|++.+++.++.+.++++.|+.++.+.
T Consensus 254 ~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------ 317 (375)
T 3op7_A 254 CAGVFDDLVAQLALAH----------YQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM------ 317 (375)
T ss_dssp CCCHHHHHHHHHHHHT----------HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS------
T ss_pred CCCcHHHHHHHHHHhc----------cHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC------
Confidence 7889999888887742 334567778888999999999999988999999999998887765321
Q ss_pred HhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 465 EAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 465 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+...++..+++++||.+.||..|+. . +++||+++.+.++|++++++|+++++++.+
T Consensus 318 ------~~~~~~~~ll~~~gi~v~~g~~~~~-~--~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 318 ------PMEDFCLQLLQEHGVLLVPGNRFER-D--GYVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp ------CHHHHHHHHHHHHCEECEEGGGGTC-T--TEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred ------CHHHHHHHHHHhCCEEEeChhhhCC-C--CeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 2455667777889999999999974 3 399999987778999999999999876543
No 65
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=2.3e-46 Score=385.35 Aligned_cols=373 Identities=18% Similarity=0.252 Sum_probs=297.3
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
+..++.....|+.+++ .+++|+|++|+|++ +. |+.+++++.+++..
T Consensus 14 ~~~~~~g~~~~d~~g~----~~~~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~- 59 (392)
T 3b1d_A 14 PNRLSHHTYKWKETET----DPQLLPAWIADMDF----------------------EV-------MPEVKQAIHDYAEQ- 59 (392)
Confidence 3444556666665544 12399999999864 22 67788888887754
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH 235 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~ 235 (533)
....|++. ..++|+++++++.+.+|.++++++|++|+|+++++..+++++. ++||+|+++.|+|+++...+...
T Consensus 60 ---~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~ 133 (392)
T 3b1d_A 60 ---LVYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT-KEGEAVLINSPVYPPFARSVRLN 133 (392)
Confidence 25668765 7899999999999888887888999999999999999999998 79999999999999999999999
Q ss_pred CCeEEEEecCCC-CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 236 GGTLVPYYLDEA-TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 236 g~~~~~v~~~~~-~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
|.+++.++++++ ++|.+|++.+++++++. ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.+
T Consensus 134 g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 208 (392)
T 3b1d_A 134 NRKLVSNSLKEENGLFQIDFEQLENDIVEN-----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQD 208 (392)
Confidence 999999998643 35779999999999742 688999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH-HHHHHHHHhhh-cc-ccCChHHH
Q 009517 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQIYKVAS-VN-LCSNISGQ 391 (533)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~-~~~~~l~~~~~-~~-~~~~~~~q 391 (533)
+.+++. ...++..+..++ ..+++++.||||.+ |++|+|+||+++ ++ ++++.+..... .+ .++++++|
T Consensus 209 ~~~~g~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (392)
T 3b1d_A 209 LTLFGH-EHVSFNTVSPDF-----KDFALVLSSATKTF-NIAGTKNSYAII---ENPTLCAQFKHQQLVNNHHEVSSLGY 278 (392)
Confidence 988653 233433331110 34679999999999 889999999997 54 58888877654 22 35788999
Q ss_pred HHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCceeEEecccCCCHHHHHHHHhcCCC
Q 009517 392 ILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-LEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV 470 (533)
Q Consensus 392 ~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 470 (533)
.++.++|+.. .++++++++.++++++.+.+.|++ +|++.+++++++|++|++++.. + .
T Consensus 279 ~a~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~---------~- 337 (392)
T 3b1d_A 279 IATETAYRYG----------KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDY-G---------L- 337 (392)
Confidence 9888888632 134567788899999999999988 7899999999999999765411 0 0
Q ss_pred ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 471 PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 471 ~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+...++..+++++||.+.||..|+ ..+.+++||+++.++++|++++++|+++++
T Consensus 338 ~~~~l~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 338 TDDALFTLLHDQAKVILNRGSDYG-SEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 123445555567899999999997 345569999998778999999999998875
No 66
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=2.7e-42 Score=360.85 Aligned_cols=330 Identities=21% Similarity=0.252 Sum_probs=260.3
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC--------------eEEEc-CCcC
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND--------------GILCP-IPQY 225 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd--------------~Vlv~-~p~~ 225 (533)
..|.+..|..+||+++|+++.+.+|+.+++++|++|+|+++|+..+++.++ ++|| +|+++ +|+|
T Consensus 77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~-~~gd~~~~~~~~~~g~~~~vi~~~~p~~ 155 (444)
T 3if2_A 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFG-GAFVNEHSQDKESKSVDKSILLPLTPEY 155 (444)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSS-EEEECC-------CEEEEEEEESSSSCC
T ss_pred hccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHh-CCCccccccccccccccceEEEeCCCCc
Confidence 679999999999999999999999998999999999999999999999998 7887 78876 9999
Q ss_pred cchHHH------HHHhCCeEEEEecCCCC---CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 226 PLYSAS------IALHGGTLVPYYLDEAT---GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 226 ~~~~~~------~~~~g~~~~~v~~~~~~---~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+.|... +...|..++.++++.++ +|++|+++|+++++.. .+++++|++++||||||.+++.+++++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 232 (444)
T 3if2_A 156 IGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEEMAHLA 232 (444)
T ss_dssp GGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred cchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHHHHHHH
Confidence 998863 34567888888887532 3689999999985431 12799999999999999999999999999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||++||+||+|..+.. + ..+... .. ....++|++.||||. +++|+|+||+++ ++++++.+
T Consensus 233 ~~a~~~~~~li~De~~~~~~~-~-~~~~~~---~~-----~~~~~~i~~~S~sK~--~~~G~r~G~~~~---~~~l~~~~ 297 (444)
T 3if2_A 233 EIAKRYDIPLIIDNAYGMPFP-N-IIYSDA---HL-----NWDNNTILCFSLSKI--GLPGMRTGIIVA---DAKVIEAV 297 (444)
T ss_dssp HHHHHTTCCEEEECTTCTTTT-C-CBCSCC---CC-----CCCTTEEEEEESTTT--TCGGGCCEEEEC---CHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCccc-c-cccccc---cc-----cCCCCEEEEechhhc--cCCCCceEEEEE---CHHHHHHH
Confidence 999999999999999985321 1 000000 00 112357999999995 569999999998 99999999
Q ss_pred HHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhc-CC--CceEecCCceeEEe
Q 009517 377 YKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDG-ILSSLARRAKTLEDAFNS-LE--GITCNKAEGAMYLF 451 (533)
Q Consensus 377 ~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~gg~~~~ 451 (533)
..... .+++++++.|.++..+++... +.++..+ +++.++++++.+.+.|.+ ++ ++.+..|.+++|+|
T Consensus 298 ~~~~~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~ 369 (444)
T 3if2_A 298 SAMNAVVNLAPTRFGAAIATPLVANDR--------IKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLW 369 (444)
T ss_dssp HHHHHHHHSSCCCHHHHHHHHHHHTSH--------HHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEE
T ss_pred HHHHHhccCCCChHHHHHHHHHHHcCc--------hhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEE
Confidence 88765 567889999999998886432 3333343 677788888888888766 44 46778899999999
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC-------CCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP-------GTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~-------g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
+.++.. +. +...++ ..|.++||.+.||..|+... +.++|||+++.++++|++++++|++++
T Consensus 370 ~~~~~~----------~~-~~~~l~-~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~ 437 (444)
T 3if2_A 370 LWFKDL----------PI-STLDLY-ERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVV 437 (444)
T ss_dssp EEETTC----------SS-CHHHHH-HHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred EEcCCC----------CC-CHHHHH-HHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 776521 01 234444 44577899999999985321 235899999888999999999999999
Q ss_pred HHHHH
Q 009517 525 KNFMD 529 (533)
Q Consensus 525 ~~~~~ 529 (533)
+++.+
T Consensus 438 ~~~~~ 442 (444)
T 3if2_A 438 RELYD 442 (444)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 88764
No 67
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=3.6e-42 Score=354.24 Aligned_cols=339 Identities=14% Similarity=0.146 Sum_probs=264.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHhc-cCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLI-RSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~-~~~gd~ 217 (533)
++.+.+++.+++.+. ....|.+..|..+||+++++++.+..+.++++++|++ |+|+++|+..+++.+. ..+||+
T Consensus 46 ~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~ 122 (396)
T 2q7w_A 46 LTSVKKAEQYLLENE---TTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKR 122 (396)
T ss_dssp CHHHHHHHHHHHHHC---CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCE
T ss_pred cHHHHHHHHhhcCcc---cccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCE
Confidence 588888888777642 2567999999999999999999765443345789998 9999999999997663 158999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|++|...++..|++++.++++++++|++|++++++++++. .++++++++++||||||.+++.+++++|++
T Consensus 123 Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~ 199 (396)
T 2q7w_A 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQ 199 (396)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999865456789999999998752 124778888999999999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH----HHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA----EVR 373 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~----~~~ 373 (533)
+|++||+++|+||+|+++.+++.....++..+.. . . .++|++.||||.+ |++|+|+||+++...++ +++
T Consensus 200 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~----~-~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~~ 272 (396)
T 2q7w_A 200 LSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAA-M----H-KELIVASSYSXNF-GLYNERVGACTLVAADSETVDRAF 272 (396)
T ss_dssp HHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHH-H----C-SCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHHHHH
T ss_pred HHHHCCCEEEEecccccccCCccchhHHHHHHHh-c----C-CcEEEEEeccccc-cccccccceEEEEcCCHHHHHHHH
Confidence 9999999999999999988753112233333321 1 1 2579999999999 88999999998511134 455
Q ss_pred HHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEecCCceeE
Q 009517 374 EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITCNKAEGAMY 449 (533)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~gg~~ 449 (533)
+.+..... .+.++++++|.++..+|++. ...+.+.+++++++++++++++.+.+.|+++. ++.+..|++|+|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 348 (396)
T 2q7w_A 273 SQMKAAIRANYSNPPAHGASVVATILSND----ALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMF 348 (396)
T ss_dssp HHHHHHHHTTTSSCCHHHHHHHHHHHTSH----HHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSE
T ss_pred HHHHHHHhhccCCCCcHHHHHHHHHhcCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceE
Confidence 55555443 44556999999999988642 12223456678888999999999999999882 388888999999
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~l 524 (533)
+|++++ . .++..+++++||.+.|| +||+++ .+++++++++++|++++
T Consensus 349 ~~~~~~----------------~-~~~~~~l~~~gv~v~~~-----------~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 349 SFSGLT----------------K-EQVLRLREEFGVYAVAS-----------GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp EECCCC----------------H-HHHHHHHHHHCEECCTT-----------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred EEecCC----------------H-HHHHHHHHhcCeeecCC-----------ceEEEeecCHHHHHHHHHHHHhcC
Confidence 996543 1 23557788899999873 599998 58999999999998753
No 68
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=4.9e-41 Score=342.25 Aligned_cols=334 Identities=18% Similarity=0.229 Sum_probs=273.8
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|+.|.+.+ +. |+.+++++.+.+.+. ....|++ .|..+||++++
T Consensus 31 ~~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~~---~~~~y~~-~~~~~l~~~la 77 (367)
T 3euc_A 31 GLVKLDAMENPY----------------------RL-------PPALRSELAARLGEV---ALNRYPV-PSSEALRAKLK 77 (367)
T ss_dssp TCEECCSSCCCC----------------------CC-------CHHHHHHHHHHHHHH---HTTCSCC-CCHHHHHHHHH
T ss_pred CeeEccCCCCCC----------------------CC-------CHHHHHHHHHHhhhh---hhhcCCC-CcHHHHHHHHH
Confidence 489999998653 22 789999998888742 1456876 47899999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++ .+ ++++|++|+|+++++..+++.++ ++||+|+++.|+|.++...++..|++++.+++++ +|.+|++++
T Consensus 78 ~~~g----~~-~~~~i~~~~g~t~a~~~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l 149 (367)
T 3euc_A 78 EVMQ----VP-AGMEVLLGNGSDEIISMLALAAA-RPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAM 149 (367)
T ss_dssp HHHT----CC-TTCEEEEEEHHHHHHHHHHHHTC-CTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHH
T ss_pred HHhC----CC-CcceEEEcCCHHHHHHHHHHHHc-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHH
Confidence 9984 21 67899999999999999999998 8999999999999999999999999999999875 678999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEccccccccccCCCCcccHHHHHhhcCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 335 (533)
++++++. ++++|++++||||||.+++.+++++|+++|++| |+++|+||+|.++.+.+. .. . +
T Consensus 150 ~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~---~~--~----~-- 213 (367)
T 3euc_A 150 LAAMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW---MS--R----L-- 213 (367)
T ss_dssp HHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS---GG--G----G--
T ss_pred HHHhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch---HH--H----H--
Confidence 9999875 789999999999999999999999999999999 999999999999664321 11 1 1
Q ss_pred CCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHH
Q 009517 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (533)
Q Consensus 336 ~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 415 (533)
.....++++.||||. +++|+|+||+++ ++++++.+.... ..++++++++.++..+|+. .+++
T Consensus 214 -~~~~~~i~~~s~sK~--~~~G~r~G~~~~---~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~-----------~~~~ 275 (367)
T 3euc_A 214 -TDFGNLLVMRTVSKL--GLAGIRLGYVAG---DPQWLEQLDKVR-PPYNVNVLTEATALFALEH-----------VAVL 275 (367)
T ss_dssp -GTCTTEEEEEECCCT--TSCSCCEEEEEE---CHHHHHHHGGGC-CSSCCCHHHHHHHHHHHTT-----------HHHH
T ss_pred -hhCCCEEEEecchhh--cccccCceeeee---CHHHHHHHHHhC-CCCCCCHHHHHHHHHHhcC-----------HHHH
Confidence 122357899999997 579999999998 999998887655 3577899999999999863 2446
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC
Q 009517 416 DGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 416 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
++++++++++++.+.+.|+++||+.+. +.+++|+|++++ . ...+. +.|.++||.+.||..|+
T Consensus 276 ~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~--~-------------~~~l~-~~l~~~gi~v~~~~~~~- 337 (367)
T 3euc_A 276 DEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP--D-------------AAQTF-DRLLARKVLIKNVSKMH- 337 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS--C-------------HHHHH-HHHHTTTEECEECGGGC-
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--C-------------HHHHH-HHHHHCCeEEEECCccC-
Confidence 778888999999999999999899855 455667886554 1 23333 45678999999999886
Q ss_pred CCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 496 VPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 496 ~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
..+.++|||+++ +++++++++++|+++++
T Consensus 338 ~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 338 PLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp GGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 344559999998 77889999999988753
No 69
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2.9e-41 Score=343.45 Aligned_cols=330 Identities=19% Similarity=0.250 Sum_probs=269.0
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia 177 (533)
++|+|+.|.+.. +. |+.+++++.+.+.. ...|+ ..+..+||++++
T Consensus 33 ~~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~-----~~~y~-~~~~~~lr~~la 77 (363)
T 3ffh_A 33 KITKLSSNENPL----------------------GT-------SKKVAAIQANSSVE-----TEIYP-DGWASSLRKEVA 77 (363)
T ss_dssp CCEECSSCSCTT----------------------CC-------CHHHHHHHHTCBSC-----CCBC-----CHHHHHHHH
T ss_pred ceEEccCCCCCC----------------------CC-------CHHHHHHHHHHHHH-----hhcCC-CcchHHHHHHHH
Confidence 399999998754 22 68888888776543 45675 457899999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
++++ +++++|++|+|+++++..+++.++ ++||+|+++.|+|+.+...++..|.+++.+++++ ++.+|++++
T Consensus 78 ~~~~------~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l 148 (363)
T 3ffh_A 78 DFYQ------LEEEELIFTAGVDELIELLTRVLL-DTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGM 148 (363)
T ss_dssp HHHT------CCGGGEEEESSHHHHHHHHHHHHC-STTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHH
T ss_pred HHhC------CChhhEEEeCCHHHHHHHHHHHHc-cCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHH
Confidence 9985 678899999999999999999998 7999999999999999999999999999999885 578999999
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
++++++ ++++|++++|+||||.+++.+++.+|+++|++ |+++|+||+|.++.+ +. ..+..... .
T Consensus 149 ~~~i~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~--~~~~~~~~------~ 212 (363)
T 3ffh_A 149 LNAIDE------KTTIVWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQ--PEKHEKLV------R 212 (363)
T ss_dssp HHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SC--CCCCGGGG------G
T ss_pred HHhccc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-cc--ccCHHHHh------h
Confidence 999976 79999999999999999999999998888877 999999999999877 43 22222221 1
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
...++|++.||||.+ |++|+|+||+++ ++++++.+..... +++++++++.++..+|++ .+++++
T Consensus 213 ~~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~-----------~~~~~~ 276 (363)
T 3ffh_A 213 TYKNLIITRTFSKIY-GLASARVGYGIA---DKEIIRQLNIVRP-PFNTTSIGQKLAIEAIKD-----------QAFIGE 276 (363)
T ss_dssp TCTTEEEEEESSSTT-CCSSCCCEEEEE---CHHHHHHHHHTCC-SCCCBHHHHHHHHHHHHC-----------HHHHHH
T ss_pred cCCCEEEEeechhhh-cCchhceeeeec---CHHHHHHHHHhCC-CCCCCHHHHHHHHHHhcC-----------HHHHHH
Confidence 233679999999999 889999999998 9999999887664 578899999999988852 145677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
++++++++++.+.+.|++++|+.+.++.+ .|+|++++. +...+... |.++||.+.||..|+. +
T Consensus 277 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~--------------~~~~~~~~-l~~~gi~v~~g~~~~~-~ 339 (363)
T 3ffh_A 277 CRTSNANGIKQYEAFAKRFEKVKLYPANG-NFVLIDLGI--------------EAGTIFSY-LEKNGYITRSGAALGF-P 339 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEECCCCS-SEEEEECSS--------------CHHHHHHH-HHHTTEECEETTTTTC-T
T ss_pred HHHHHHHHHHHHHHHHhhCCCceECCCCC-eEEEEECCC--------------CHHHHHHH-HHHCCeEEEeCccCCC-C
Confidence 88889999999999999966999877665 467866541 23344444 4568999999999974 3
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
++|||+++ +++++++++++|+++
T Consensus 340 --~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 340 --TAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp --TEEEEECC-CHHHHHHHHHHHHHH
T ss_pred --CeEEEECC-CHHHHHHHHHHHHHh
Confidence 39999998 778899999999875
No 70
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=3.6e-41 Score=341.44 Aligned_cols=336 Identities=18% Similarity=0.217 Sum_probs=273.6
Q ss_pred cceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHH
Q 009517 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (533)
Q Consensus 97 ~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 176 (533)
+.+|||+.|.+.. +. |+.+++++.+.+.. ...|+ ..|..+||+++
T Consensus 16 ~~~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~-----~~~y~-~~~~~~l~~~l 60 (354)
T 3ly1_A 16 DNPIRINFNENPL----------------------GM-------SPKAQAAARDAVVK-----ANRYA-KNEILMLGNKL 60 (354)
T ss_dssp SSCEECSSCCCSS----------------------CC-------CHHHHHHHHHTGGG-----TTSCC-HHHHHHHHHHH
T ss_pred CceEEccCCCCCC----------------------CC-------CHHHHHHHHHHHhh-----CcCCC-CCchHHHHHHH
Confidence 3499999998664 22 78999999888775 45674 45789999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHH
Q 009517 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (533)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~ 256 (533)
+++++ +++++|++|+|+++++..+++.++ ++||+|+++.|+|+++...++..|.+++.++.++ ++++|+++
T Consensus 61 a~~~~------~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~ 131 (354)
T 3ly1_A 61 AAHHQ------VEAPSILLTAGSSEGIRAAIEAYA-SLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEG 131 (354)
T ss_dssp HHHTT------SCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHH
T ss_pred HHHhC------CChHHEEEeCChHHHHHHHHHHHh-CCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHH
Confidence 99974 668899999999999999999998 8999999999999999999999999999999874 47999999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 336 (533)
|++++++ .+++++|++++|+||||.+++.+++++|+++| ++|+++|+||+|.++.+++. ..+.......
T Consensus 132 l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~--~~~~~~~~~~---- 200 (354)
T 3ly1_A 132 LKAAVAA----YSGPSIVYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR--FRSISPMITQ---- 200 (354)
T ss_dssp HHHHHHT----CSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT--CCCSHHHHHT----
T ss_pred HHHHhcc----CCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc--cCCHHHHhhh----
Confidence 9999983 11799999999999999999999999999999 89999999999999887653 2233233222
Q ss_pred CCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 337 ~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
...+++++.||||++ |++|+|+||+++ ++++++.+...... ++++++++.++..+|+. .++++
T Consensus 201 -~~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~-----------~~~~~ 263 (354)
T 3ly1_A 201 -GAENIILLKTFSKIH-AMAGMRVGYAVA---HPTVIALMGRYVAG-EKINFSGVDAALASMND-----------SAFIT 263 (354)
T ss_dssp -TCSSEEEEEESSSTT-CCGGGCCEEEEC---CHHHHHHHGGGTTC-SCCCHHHHHHHHHHTTC-----------HHHHH
T ss_pred -cCCCEEEEeeChhhc-cChhhhheeeec---CHHHHHHHHHhcCC-CCCCHHHHHHHHHHhcC-----------HHHHH
Confidence 113579999999999 899999999998 99999988776644 78899999999999863 14567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
+++++++++++++.+.|+++ |+.+.++.| .|+|++++. +...+.. .|.++||.+. |..++
T Consensus 264 ~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~-~~~~~~~~~--------------~~~~~~~-~l~~~gi~v~-g~~~~-- 323 (354)
T 3ly1_A 264 YSKKSNDVSRQILLKALEDL-KLPYLPSEG-NFVFHQLVV--------------PLKDYQT-HMADAGVLIG-RAFPP-- 323 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCBCCCCS-SEEEEECSS--------------CHHHHHH-HHHHTTEECC-CCCTT--
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeECCCCc-eEEEEECCC--------------CHHHHHH-HHHHCCEEEe-ecCCC--
Confidence 78888999999999999988 888776655 567866541 2334444 4556899999 77554
Q ss_pred CCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 497 ~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
+.++|||+++ +++++++++++|++++++
T Consensus 324 -~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 324 -ADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -CTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred -CCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 2349999998 678899999999988764
No 71
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=8e-41 Score=340.42 Aligned_cols=321 Identities=18% Similarity=0.261 Sum_probs=252.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+++.. ...|++ .|..+||++++++++ +++++|++|+|+++++..+++.+ +||+|++
T Consensus 39 ~~~v~~a~~~~~~~-----~~~y~~-~~~~~l~~~la~~~~------~~~~~v~~~~g~~~al~~~~~~~---~gd~vl~ 103 (364)
T 1lc5_A 39 PVSVKRALIDNLDC-----IERYPD-ADYFHLHQALARHHQ------VPASWILAGNGETESIFTVASGL---KPRRAMI 103 (364)
T ss_dssp CHHHHHHHHHTGGG-----GGSCCC-TTCHHHHHHHHHHHT------SCGGGEEEESSHHHHHHHHHHHH---CCSEEEE
T ss_pred CHHHHHHHHHHHHH-----hhcCCC-CCHHHHHHHHHHHHC------cCHHHEEECCCHHHHHHHHHHHc---CCCeEEE
Confidence 68888888887754 456865 479999999999984 56789999999999999999988 4699999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|+++...++..|.+++.++.+.+++|.+ ++++.+.+++ ++++|++++||||||.+++.+++++|+++|+
T Consensus 104 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 176 (364)
T 1lc5_A 104 VTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIADRCK 176 (364)
T ss_dssp EESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhh
Confidence 99999999999999999999999876444544 4545544432 6889999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE-EecCCHHHHHHHHHh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME-VTGFSAEVREQIYKV 379 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~-~~~~~~~~~~~l~~~ 379 (533)
+||+++|+||+|.++.+++. +.. .+ + ....+++++.||||.+ |++|+|+||++ + ++++++.+...
T Consensus 177 ~~~~~li~De~~~~~~~~~~-~~~---~~---~---~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~---~~~~~~~l~~~ 242 (364)
T 1lc5_A 177 SLNINLILDEAFIDFIPHET-GFI---PA---L---KDNPHIWVLRSLTKFY-AIPGLRLGYLVNS---DDAAMARMRRQ 242 (364)
T ss_dssp HHTCEEEEECTTGGGSTTCC-CSG---GG---C---TTCTTEEEEEESTTTT-TCTTTCCEEEECC---CHHHHHHHHHH
T ss_pred hcCcEEEEECcChhhccCcc-chh---hH---h---ccCCCEEEEEECchhh-cCCccceEEEEEC---CHHHHHHHHHh
Confidence 99999999999999877532 111 11 1 1123478999999999 88999999999 7 99999888776
Q ss_pred hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHH
Q 009517 380 ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 380 ~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~ 459 (533)
. .++++++++|.++.++|+. .+++++++++++++++++.+.|+++||+.+.++.| .|+|++++.
T Consensus 243 ~-~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g-~~~~~~~~~--- 306 (364)
T 1lc5_A 243 Q-MPWSVNALAALAGEVALQD-----------SAWQQATWHWLREEGARFYQALCQLPLLTVYPGRA-NYLLLRCER--- 306 (364)
T ss_dssp S-CTTCSCHHHHHHHHHGGGC-----------HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSS-SEEEEEESC---
T ss_pred C-CCCCCCHHHHHHHHHHHhC-----------cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCC-eEEEEECCC---
Confidence 5 3578899999999999863 13567788889999999999999888998876655 566755541
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+...++.. |.++||.+.||..|+. .+.++|||+++. .+++++++++|+++++++
T Consensus 307 -----------~~~~l~~~-l~~~gi~v~~g~~~~~-~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 307 -----------EDIDLQRR-LLTQRILIRSCANYPG-LDSRYYRVAIRS-AAQNERLLAALRNVLTGI 360 (364)
T ss_dssp -----------TTCCHHHH-HHTTTEECEECTTSTT-CCTTEEEEECCC-HHHHHHHHHHHHHHC---
T ss_pred -----------cHHHHHHH-HHHCCcEEeeCcccCC-CCCCEEEEEeCC-HHHHHHHHHHHHHHhhcc
Confidence 01223334 4567999999999863 334599999874 566888888888887665
No 72
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=1.3e-40 Score=342.47 Aligned_cols=335 Identities=19% Similarity=0.209 Sum_probs=259.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHhcc-CCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR-SENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~~-~~gd~ 217 (533)
++.+.+++.+++... ....|++..|..+||+++++++.+. + +++++|++ |+|+++|+..+++.+.. .+||+
T Consensus 46 ~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~la~~~~~~-~--~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~ 119 (394)
T 2ay1_A 46 MRAVHAAEQRMLETE---TTKTYAGLSGEPEFQKAMGELILGD-G--LKSETTATLATVGGTGALRQALELARMANPDLR 119 (394)
T ss_dssp CHHHHHHHHHHHHHC---CCCCCCCSSCCHHHHHHHHHHHHGG-G--CCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCC
T ss_pred cHHHHHHHHHhcCCc---ccCCCCCCCCcHHHHHHHHHHHhCC-C--CCcccEEEEecCCchhHHHHHHHHHHhcCCCCE
Confidence 578888887777642 2567999899999999999998532 2 36789999 99999999999988751 38999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|+++...++..|.+++.++++.++++++|++++++++++. .++++++++++||||||.+++.+++++|++
T Consensus 120 vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG~~~~~~~l~~i~~ 196 (394)
T 2ay1_A 120 VFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTGANLTLDQWAEIAS 196 (394)
T ss_dssp EEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999865456789999999999752 123677777899999999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH----
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR---- 373 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~---- 373 (533)
+|++||+++|+||+|.++.+++.....++..+. .. .+ ++|++.||||.+ |++|+|+||+++...+++++
T Consensus 197 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~---~~--~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~l~ 269 (394)
T 2ay1_A 197 ILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIA-SR---IP--EVLIAASCSKNF-GIYRERTGCLLALCADAATRELAQ 269 (394)
T ss_dssp HHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHH-HH---CS--SEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHHHHH
T ss_pred HHHHCCCEEEEecCccccccCcccchHHHHHHh-hc---CC--CEEEEEeccCCC-cCcCCccceEEEEeCCHHHHHHHH
Confidence 999999999999999998774311122332221 21 12 478999999999 88999999998522245544
Q ss_pred HHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEecCCceeE
Q 009517 374 EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITCNKAEGAMY 449 (533)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~gg~~ 449 (533)
+.+..... .+.++++++|.++..+|++. ...+.+.+++++++++++++++++.+.|+++. ++.+..+++|+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~ 345 (394)
T 2ay1_A 270 GAMAFLNRQTYSFPPFHGAKIVSTVLTTP----ELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMF 345 (394)
T ss_dssp HHHHHHHHTTTSSCCCHHHHHHHHHHHSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSE
T ss_pred HHHHHHHhhhcCCCChHHHHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEE
Confidence 33333333 44456899999998888632 11223445678889999999999999998872 488888899999
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CCcCcHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~~~~l~~~ 523 (533)
+|++++ . . .+..+++++||.+.|| +||+++ .+++++++++++|+++
T Consensus 346 ~~~~~~--~--------------~-~~~~~l~~~gi~v~~~-----------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 346 SRLGAT--P--------------E-QVKRIKEEFGIYMVGD-----------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp EECCCC--H--------------H-HHHHHHHHHCEECCTT-----------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred EeeCCC--H--------------H-HHHHHHHhCCEEecCC-----------CeEEeecCCHhhHHHHHHHHHHc
Confidence 996543 1 2 2457778899999873 499997 6899999999999875
No 73
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=2.9e-40 Score=335.31 Aligned_cols=300 Identities=20% Similarity=0.313 Sum_probs=244.7
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCe
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~ 238 (533)
...|++.. ..+||+++|++++ +++++|++|+|+++++..+++.++ ++| |+|+++.|+|++|...++..|.+
T Consensus 52 ~~~Y~~~~-~~~lr~~la~~~~------~~~~~v~~~~G~~~ai~~~~~~~~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~ 123 (356)
T 1fg7_A 52 LNRYPECQ-PKAVIENYAQYAG------VKPEQVLVSRGADEGIELLIRAFC-EPGKDAILYCPPTYGMYSVSAETIGVE 123 (356)
T ss_dssp TTSCCCSS-CHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHHHHHHC-CTTTCEEEECSSSCTHHHHHHHHHTCE
T ss_pred hccCCCcc-HHHHHHHHHHHhC------CChHHEEEcCCHHHHHHHHHHHHh-CCCCCEEEEeCCChHHHHHHHHHcCCE
Confidence 56798764 8999999999984 667899999999999999999998 799 99999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccc
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~ 318 (533)
++.+++++ +|++|+++++++++ ++++|++++||||||.+++.+++++|+++|+ +|+++|+||+|.++..
T Consensus 124 ~~~v~~~~--~~~~d~~~l~~~i~-------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~- 192 (356)
T 1fg7_A 124 CRTVPTLD--NWQLDLQGISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP- 192 (356)
T ss_dssp EEECCCCT--TSCCCHHHHHTSCT-------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSG-
T ss_pred EEEeeCCC--CCCCCHHHHHHHhc-------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcC-
Confidence 99998863 67899999988774 4899999999999999999999999999999 9999999999998652
Q ss_pred CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHc
Q 009517 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM 398 (533)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L 398 (533)
+ .++..+.. ...+++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++|.++.++|
T Consensus 193 ~----~~~~~~~~------~~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~~-~~~~~~~~~~a~~~~l 257 (356)
T 1fg7_A 193 Q----ASLAGWLA------EYPHLAILRTLSKAF-ALAGLRCGFTLA---NEEVINLLMKVIA-PYPLSTPVADIAAQAL 257 (356)
T ss_dssp G----GCSGGGTT------TCTTEEEEEESSSTT-CCGGGCCEEEEE---CHHHHHHHHHHSC-SSCSCHHHHHHHHHHT
T ss_pred C----CcHHHHHh------hCCCEEEEecchHhh-cCchhhhEEEEe---CHHHHHHHHHhcC-CCCCCHHHHHHHHHHh
Confidence 1 12112211 123479999999998 899999999998 9999998877654 4578999999999998
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHH
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRR 478 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (533)
++. .+ +++++++++++++++++.+.|++++++..+.|.+++|+|++++ +...++..
T Consensus 258 ~~~--------~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~ 313 (356)
T 1fg7_A 258 SPQ--------GI-VAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK---------------ASSAVFKS 313 (356)
T ss_dssp SHH--------HH-HHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET---------------THHHHHHH
T ss_pred cCc--------cH-HHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC---------------CHHHHHHH
Confidence 621 11 2367788889999999999999985544455667788897654 12334444
Q ss_pred HHHccceEEEc-CCCCCCCCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 479 LLNATGIVLVP-GSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 479 ll~~~gV~v~p-g~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
|.++||.+.| |..|+. .+ ++||+++ +++++++++++|++
T Consensus 314 -L~~~gI~v~~~g~~~~~-~~--~iRis~~-~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 314 -LWDQGIILRDQNKQPSL-SG--CLRITVG-TREESQRVIDALRA 353 (356)
T ss_dssp -HHHTTEECEECTTSTTC-TT--EEEEECC-CHHHHHHHHHHHHT
T ss_pred -HHHCCEEEEECCCCCCC-CC--eEEEEeC-CHHHHHHHHHHHHh
Confidence 4688999999 888873 33 9999998 46788888888865
No 74
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.3e-39 Score=330.80 Aligned_cols=318 Identities=18% Similarity=0.248 Sum_probs=255.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+++.. ...|+ ..+..++|++++++++ +++++|++|+|+++++..+++.+ |+|++
T Consensus 41 ~~~v~~a~~~~~~~-----~~~y~-~~~~~~l~~~la~~~~------~~~~~i~~~~g~t~al~~~~~~~-----d~vi~ 103 (361)
T 3ftb_A 41 PKSFLNNIDEGIKN-----LGVYP-DVNYRRLNKSIENYLK------LKDIGIVLGNGASEIIELSISLF-----EKILI 103 (361)
T ss_dssp CHHHHTTHHHHHHG-----GGSCC-CTTCHHHHHHHHHHHT------CCSCEEEEESSHHHHHHHHHTTC-----SEEEE
T ss_pred CHHHHHHHHHHHHH-----hcCCC-CccHHHHHHHHHHHhC------CCcceEEEcCCHHHHHHHHHHHc-----CcEEE
Confidence 78899999888876 45674 4678999999999984 67889999999999999998876 79999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|+++...++..|++++.++++++. +++++++++++++ +++|++++||||||.+++.+++++|+++|+
T Consensus 104 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 174 (361)
T 3ftb_A 104 IVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLKLAE 174 (361)
T ss_dssp EESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHHHHH
T ss_pred ecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhh
Confidence 9999999999999999999999998654 5677888888752 789999999999999999999999999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
+||+++|+||+|.++.++ . ..+..... ....+++++.||||.+ |++|+|+||++. .++++++.+....
T Consensus 175 ~~~~~li~De~~~~~~~~-~--~~~~~~~~------~~~~~~i~~~s~sK~~-~~~G~r~g~~~~--~~~~~~~~~~~~~ 242 (361)
T 3ftb_A 175 EKKKTIIIDEAFIEFTGD-P--SSSFVGEI------KNYSCLFIIRAMTKFF-AMPGIRFGYGIT--NNKEIAAKIKAKQ 242 (361)
T ss_dssp HHTCEEEEECSSGGGTCC-T--TSSSGGGT------TTCSSEEEEEESSSTT-SCGGGCCEEEEE--SCHHHHHHHHTTS
T ss_pred hcCCEEEEECcchhhcCC-c--ccchhHhc------ccCCCEEEEeeChhhc-CCCCcceeEEEe--CCHHHHHHHHhhC
Confidence 999999999999998875 2 12211211 1223578999999999 889999999983 2899998887655
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EecCCceeEEecccCCCHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT-CNKAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~gg~~~~~~~~~~~~ 459 (533)
. +++++++++.++.++|++ .+++++++++++++++.+.+.|+++|++. +.++.|+ |+|++++.
T Consensus 243 ~-~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~--- 306 (361)
T 3ftb_A 243 N-PWNINCFAEMAAINCLKD-----------TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHAN-FVLCRLEN--- 306 (361)
T ss_dssp C-TTCSCHHHHHHHHHTSSC-----------HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSS-EEEEEESS---
T ss_pred C-CCCCCHHHHHHHHHHhcC-----------HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCe-EEEEEcCC---
Confidence 3 578899999999999863 24567788889999999999999998898 7777765 46655541
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
.+...++.. |.++||.+.||..|+ ..+.++|||+++ +.++++++++.|+++.+
T Consensus 307 ----------~~~~~l~~~-l~~~gi~v~~g~~~~-~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 307 ----------ISGEKLYDS-LLKEDIVIRRCCNFI-GLDDSFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp ----------SCHHHHHHH-HHTTTEECEECTTST-TCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHH-HHHCCeEEeeCccCC-CCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 123444444 455699999999997 344569999998 45566777777776654
No 75
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.5e-41 Score=349.17 Aligned_cols=303 Identities=16% Similarity=0.188 Sum_probs=236.7
Q ss_pred ccccCCCccc-----HHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhccCCCC----eEEEcCCcCcchH
Q 009517 160 TGAYSHSQGI-----KGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSEND----GILCPIPQYPLYS 229 (533)
Q Consensus 160 ~~~Y~~~~G~-----~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd----~Vlv~~p~~~~~~ 229 (533)
...|++..|. ++||+++|++++ .+|+.+.+ ++|++|+|+++++..++++++ ++|| +|++++|+|..|.
T Consensus 56 ~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-~~Gd~~~~~Vlv~~P~y~~~~ 133 (391)
T 3bwn_A 56 MSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGTGSTQLCQAAVHALS-SLARSQPVSVVAAAPFYSTYV 133 (391)
T ss_dssp CSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEEHHHHHHHHHHHHHH-HTSSSSSEEEEECSSCCTHHH
T ss_pred hhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeCChHHHHHHHHHHhc-CCCCCCcceEEEcCCCchhHH
Confidence 5679999998 999999999998 57888877 599999999999999999998 7999 9999999999999
Q ss_pred HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 230 ~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
..++..|++++.++++.+ +++ .+ ++++|++++||||||.+++ +|++.++.++++||+|
T Consensus 134 ~~~~~~g~~~~~~~~d~~---~l~--------~~------~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~D 191 (391)
T 3bwn_A 134 EETTYVRSGMYKWEGDAW---GFD--------KK------GPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHD 191 (391)
T ss_dssp HHHHTTCBTTEEEEEEST---TCC--------CC------SCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEE
T ss_pred HHHHHcCCeEEEecCCHH---HcC--------CC------CCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEe
Confidence 999999999999988754 232 12 7899999999999999996 3444222233999999
Q ss_pred cccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCCh
Q 009517 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNI 388 (533)
Q Consensus 310 e~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~ 388 (533)
|+|.. +. ..++.. ...++|++.||||++ |++|+|+||+++ .++++++.+..... .+++++.
T Consensus 192 e~y~~----~~--~~~l~~---------~~~~~i~~~S~SK~~-g~~GlRiG~~~~--~~~~l~~~l~~~~~~~~~~~~~ 253 (391)
T 3bwn_A 192 FAYYW----PH--YTPITR---------RQDHDIMLFTFSKIT-GHAGSRIGWALV--KDKEVAKKMVEYIIVNSIGVSK 253 (391)
T ss_dssp CTTCS----TT--TSCCCC---------CBCCSEEEEEHHHHH-SCGGGCEEEEEE--CCHHHHHHHHHHHHHHHSSCCH
T ss_pred CCCCC----CC--CCcccc---------CCCCeEEEEechhhc-CCCccceEEEEe--cCHHHHHHHHHHhcccccCCCH
Confidence 99973 21 111111 123579999999998 899999999985 37899999988775 5688899
Q ss_pred HHHHHHHHHcCCCCCCChhHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC-------------CceeEEe
Q 009517 389 SGQILASLVMSPPKVGDESYE----SYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA-------------EGAMYLF 451 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-------------~gg~~~~ 451 (533)
++|.++..+|++.. .+- .+.++++++++.++++++.+.+.|++++|+.+..| .+|+|+|
T Consensus 254 ~~q~a~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~ 329 (391)
T 3bwn_A 254 ESQVRTAKILNVLK----ETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAW 329 (391)
T ss_dssp HHHHHHHHHHHHHH----HHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEE
T ss_pred HHHHHHHHHHhCcc----hhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEE
Confidence 99999998885310 000 01245678899999999999999999877776544 4556899
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
++++. . .++..+|+++||.+.||..|+. +.++||||++.++++|++++++|++++++
T Consensus 330 ~~~~~---------------~-~~~~~~l~~~gV~v~pg~~fg~--~~~~iRis~~~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 330 LGTKE---------------E-TDLVSELRRHKVMSRAGERCGS--DKKHVRVSMLSREDVFNVFLERLANMKLI 386 (391)
T ss_dssp EEESS---------------S-CCHHHHHHHTTEECEEGGGGTC--CTTEEEEESCSCHHHHHHHHHHHHSCC--
T ss_pred ecCCc---------------H-HHHHHHHHHCCEEEccCCCCCC--CCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 77651 1 1245677889999999999974 34599999998888899999999988764
No 76
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=3.5e-38 Score=321.51 Aligned_cols=322 Identities=17% Similarity=0.238 Sum_probs=254.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+++.+... ....|++..+ .+||+++++++.+.+|..+++++|++|+|+++++..+++.+. ++||+|++
T Consensus 45 ~~~v~~a~~~~~~~~~~-~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~-~~gd~Vl~ 121 (369)
T 3cq5_A 45 SEALVADLVATVDKIAT-ELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFG-GPGRTALG 121 (369)
T ss_dssp CHHHHHHHHHHHHHHGG-GTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-STTCEEEE
T ss_pred CHHHHHHHHHHHHhccc-ccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhc-CCCCEEEE
Confidence 78899998888765211 2457877766 799999999999888877888999999999999999999998 79999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|+++...++..|.+++.++.+ ++|++|++++++++++. ++++|++++|+||||.+++.+++++|+ +
T Consensus 122 ~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~---~ 191 (369)
T 3cq5_A 122 FQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERII---N 191 (369)
T ss_dssp EESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHH---H
T ss_pred cCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHH---H
Confidence 9999999999999999999999965 35789999999999864 688999999999999999966555554 5
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
.+++++|+||+|.++.++ .+...+... .+ .+++++.||||++ |++|+|+||+++ ++++++.+....
T Consensus 192 ~~~~~li~De~~~~~~~~-----~~~~~~~~~----~~-~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~ 257 (369)
T 3cq5_A 192 VAPGIVIVDEAYAEFSPS-----PSATTLLEK----YP-TKLVVSRTMSKAF-DFAGGRLGYFVA---NPAFIDAVMLVR 257 (369)
T ss_dssp HCSSEEEEECTTGGGCCS-----CCGGGGTTT----CT-TTEEEEEESSSTT-SCGGGCCEEEEE---CTHHHHHHHTTS
T ss_pred hCCCEEEEECCchhhcCC-----cchHHHHhh----CC-CCEEEEEechHhc-CCcccceEEEEe---CHHHHHHHHHcC
Confidence 556999999999997653 121122111 12 1479999999999 789999999998 888888887654
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
. +++++++.|.++..+|+. .+++++++++++++++.+.+.|++. |+.+.++. +.|+|++++ .
T Consensus 258 ~-~~~~~~~~~~a~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~--~-- 319 (369)
T 3cq5_A 258 L-PYHLSALSQAAAIVALRH-----------SADTLGTVEKLSVERVRVAARLEEL-GYAVVPSE-SNFVFFGDF--S-- 319 (369)
T ss_dssp C-TTCSCHHHHHHHHHHHHT-----------HHHHHTHHHHHHHHHHHHHHHHHHH-TCEEECCS-SSEEEEECC--S--
T ss_pred C-CCCCCHHHHHHHHHHhcC-----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCCC-CeEEEEECC--C--
Confidence 3 467899999998888852 1346677888999999999999886 88887555 456776543 1
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+...+... |.++||.+.|| + . .++|||+++ +++++++++++|+++++
T Consensus 320 ----------~~~~l~~~-l~~~gi~v~~~---~-~--~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 320 ----------DQHAAWQA-FLDRGVLIRDV---G-I--AGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp ----------SHHHHHHH-HHHTTEECBCC---S-C--TTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred ----------CHHHHHHH-HHHCCEEEEEC---C-C--CCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 13344444 56789999997 2 1 238999998 67889999999988764
No 77
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.4e-39 Score=325.71 Aligned_cols=325 Identities=17% Similarity=0.223 Sum_probs=254.4
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|||+.|.+.. +. |+++++++.+.+.. ...|++..+ .+||+++|+
T Consensus 17 ~id~~~~~~~~----------------------~~-------~~~v~~a~~~~~~~-----~~~y~~~~~-~~lr~~la~ 61 (350)
T 3fkd_A 17 IVNFSTTVWTD----------------------GD-------KDHLEKHLVENLNC-----IRHYPEPDA-GTLRQMLAK 61 (350)
T ss_dssp CEECSCCSCCC----------------------SC-------CHHHHHHHHHTGGG-----GGSCCCTTC-HHHHHHHHH
T ss_pred EEEccCCCCCC----------------------CC-------CHHHHHHHHHhHhH-----HhcCCCCcH-HHHHHHHHH
Confidence 99999998764 22 78899888887743 667988876 899999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEec-CCCCCCCCCHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYL-DEATGWGLETSEV 257 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~ld~~~l 257 (533)
+++ +++++|++|+|+++++..+++.+. ||+|+++.|+|..+...++..|++++.+++ ++.+++ ++
T Consensus 62 ~~~------~~~~~i~~t~g~~~al~~~~~~l~---gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~--- 127 (350)
T 3fkd_A 62 RNS------VDNNAILVTNGPTAAFYQIAQAFR---GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEA--DF--- 127 (350)
T ss_dssp HTT------CCGGGEEEESHHHHHHHHHHHHTT---TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGS--CC---
T ss_pred HhC------cCHHHEEEcCCHHHHHHHHHHHHC---CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccC--cc---
Confidence 974 678899999999999999999884 899999999999999999999999999999 653433 33
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCC
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (533)
+ ++++|++++|+||||.+++.+++++|+++|+++ +||+||+|.++.+.+... . ..+ +
T Consensus 128 -----~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~-----~~~---~ 184 (350)
T 3fkd_A 128 -----S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--P-----ADI---K 184 (350)
T ss_dssp -----T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--G-----GGG---T
T ss_pred -----C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcchh--h-----HHh---h
Confidence 2 789999999999999999999888888888765 999999999988765321 1 111 2
Q ss_pred CCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHH
Q 009517 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (533)
Q Consensus 338 ~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 417 (533)
...+++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++|.++..+|+... .+. ++
T Consensus 185 ~~~~~i~~~S~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-------~~~---~~ 249 (350)
T 3fkd_A 185 GRKNLVMVYSFSHAY-GIPGLRIGYIVA---NKDFMKRVAAFST-PWAVNALAIEAAKFILIHPA-------QFT---LP 249 (350)
T ss_dssp TCSSEEEEEESHHHH-SCGGGCCEEEEC---CHHHHHHHHTTCC-TTCSCHHHHHHHHHHHHCTT-------TTC---CC
T ss_pred cCCCEEEEecCchhc-cCcchheEeEEe---CHHHHHHHHHhCC-CCCCCHHHHHHHHHHHhCHH-------HHH---HH
Confidence 234679999999999 889999999998 9999998877653 46889999999999887542 111 22
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 418 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
+++.+ ++++.+.+.|+++||+.+.++.++ |+|+.++.. +...++..+++++||.+.||..|+ ..
T Consensus 250 ~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~l~~~L~~~~gi~v~~g~~f~-~~ 313 (350)
T 3fkd_A 250 IRKWQ-RNTVDFITALNRLDGVEVHPSGTT-FFLLRLKKG-------------TAAELKKYMLEEYNMLIRDASNFR-GL 313 (350)
T ss_dssp HHHHH-HHHHHHHHHHHHSTTEEECCCSSS-EEEEEESSS-------------CHHHHHHHHHHTTCEECEECTTST-TC
T ss_pred HHHHH-HHHHHHHHHHhcCCCcEECCCCCc-EEEEECCCC-------------CHHHHHHHHHHHCCEEEEeCccCC-CC
Confidence 22233 778889999988889988766654 566555421 244555566655999999999997 34
Q ss_pred CCceEEEEecCCcCcHHHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTILPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 498 g~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 527 (533)
+.++|||+++ +++++++++++|++++++.
T Consensus 314 ~~~~iRis~~-~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 314 DESYVRITTQ-RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp CTTEEEEECC-CHHHHHHHHHHHHHHHTC-
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHHHHHh
Confidence 4569999998 4566788888888777654
No 78
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=3.7e-38 Score=316.95 Aligned_cols=305 Identities=18% Similarity=0.251 Sum_probs=241.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+.+.. ...|+ ..|..+||++++++++ +++++|++|+|+++++..+++.+ +||+|++
T Consensus 31 ~~~v~~a~~~~~~~-----~~~y~-~~~~~~lr~~la~~~~------~~~~~i~~t~G~~~~l~~~~~~~---~gd~vl~ 95 (337)
T 3p1t_A 31 EPRVQAAIAAAAAR-----INRYP-FDAEPRVMRKLAEHFS------CPEDNLMLVRGIDECFDRISAEF---SSMRFVT 95 (337)
T ss_dssp CHHHHHHHHHHGGG-----TTSCC-TTHHHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHHHHHS---TTSEEEE
T ss_pred CHHHHHHHHHhhhh-----hccCC-CCchHHHHHHHHHHhC------cCHHHEEEeCCHHHHHHHHHHhc---CCCeEEE
Confidence 78888888887765 45685 5689999999999985 67889999999999999999986 7999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|.++...++..|++++.+++++ +|++|+++++++ . ++++|++++||||||.+++.++ |.++|+
T Consensus 96 ~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~------~~~~v~i~~p~nptG~~~~~~~---l~~l~~ 162 (337)
T 3p1t_A 96 AWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--S------RDDCVVLANPSNPTGQALSAGE---LDQLRQ 162 (337)
T ss_dssp ESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--C------TTEEEEEESSCTTTCCCCCHHH---HHHHHH
T ss_pred eCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--c------CCCEEEEeCCCCCCCCCCCHHH---HHHHHH
Confidence 99999999999999999999999874 578999999875 2 6789999999999999999555 555667
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
++++ +|+||+|.+|.+.+. . . . ....+++++.||||++ |++|+|+||+++ ++++++.+.+..
T Consensus 163 ~~~~-~ivDea~~~~~~~~~-~--~-----~-----~~~~~~i~~~S~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~ 224 (337)
T 3p1t_A 163 RAGK-LLIDETYVDYSSFRA-R--G-----L-----AYGENELVFRSFSKSY-GLAGLRLGALFG---PSELIAAMKRKQ 224 (337)
T ss_dssp HCSE-EEEECTTGGGSSCSS-S--C-----C-----CCBTTEEEEEESSSTT-CCTTTCCEEEEC---CHHHHHHHHTTS
T ss_pred hCCc-EEEECCChhhccccc-c--c-----c-----ccCCCEEEEeeCchhc-cCcchheEEEEe---CHHHHHHHHhhc
Confidence 7786 566999998665332 1 1 0 1223578899999999 899999999998 999998887654
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
..++++.++|.++..+|+.. +..++.++++.++++.+.+.|+++ |+.+.+++++|+.|. .. .
T Consensus 225 -~~~~~~~~~~~a~~~~l~~~-----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-~~--~-- 286 (337)
T 3p1t_A 225 -WFCNVGTLDLHALEAALDND-----------RAREAHIAKTLAQRRRVADALRGL-GYRVASSEANFVLVE-NA--A-- 286 (337)
T ss_dssp -CTTCSCHHHHHHHHHHHTCH-----------HHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSEEEEE-CT--T--
T ss_pred -CCCCCCHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHHHHHHHHC-cCEECCCCCeEEEEE-cC--C--
Confidence 44778899999998888631 123344555667788899999998 888888888766553 22 1
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
... +.++|.++||.+.||..|+. ++ +||||++ +++++++++++|+++++
T Consensus 287 -----------~~~-~~~~l~~~gi~v~~g~~~~~-~~--~iRis~~-~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 287 -----------GER-TLRFLRERGIQVKDAGQFGL-HH--HIRISIG-REEDNDRLLAALAEYSD 335 (337)
T ss_dssp -----------THH-HHHHHHHTTEECEEGGGGTC-CS--EEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred -----------HHH-HHHHHHHCCeEEEECccCCC-CC--eEEEecC-CHHHHHHHHHHHHHHhh
Confidence 122 34667789999999999974 33 9999998 56778888888877643
No 79
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=1.6e-40 Score=345.01 Aligned_cols=335 Identities=15% Similarity=0.135 Sum_probs=257.8
Q ss_pred ceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCc-c---cHHHH
Q 009517 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQ-G---IKGLR 173 (533)
Q Consensus 98 ~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~-G---~~~lr 173 (533)
.+|+|+.|+|++ .. |+.+.+++.+.+..... ....|++.. | ..+||
T Consensus 57 ~~i~l~~g~~~~----------------------~~-------~~~v~~a~~~~l~~~~~-~~~~Y~~~~~G~~~~~~lr 106 (427)
T 2hox_A 57 CSADVASGDGLF----------------------LE-------EYWKQHKEASAVLVSPW-HRMSYFFNPVSNFISFELE 106 (427)
T ss_dssp CCEECCSCCCGG----------------------GH-------HHHTTSHHHHCEEECTT-TTCSSSCSSCCTTCCHHHH
T ss_pred ceEEecCcCCCC----------------------CC-------CHHHHHhHHhhhhcCCc-ccccCCCCCCCccchHHHH
Confidence 489999999874 21 35556666666532211 233499988 9 99999
Q ss_pred HHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh--------ccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecC
Q 009517 174 DTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--------IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (533)
Q Consensus 174 ~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l--------~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~ 245 (533)
+++|++++++++..+++++|++|+|+++++..++.++ + ++||+|+++.|+|..|...++..|++++.+
T Consensus 107 ~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~-~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--- 182 (427)
T 2hox_A 107 KTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPD-APESKVVAHAPFYPVFREQTKYFDKKGYVW--- 182 (427)
T ss_dssp HHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTT-SCCEEEEECSSCCHHHHHHHHHSCBTTEEE---
T ss_pred HHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccC-CCCCEEEEeCCCcccHHHHHHHcCCeeeee---
Confidence 9999999987777788999999999999999999999 7 899999999999999999999999887643
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCccc
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHS 325 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~ 325 (533)
.+|++.|++++++ ++++|++++||||||.+++ +.+ + ++..|.|++| |++ ..+
T Consensus 183 -----~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~----~~~---~~s 234 (427)
T 2hox_A 183 -----AGNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVY----YWP---HYT 234 (427)
T ss_dssp -----EEEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTT----CST---TTS
T ss_pred -----cCCHHHHHHhhcC------CceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeecc----cCC---CCC
Confidence 5577888877765 6899999999999999999 422 2 4556666665 322 222
Q ss_pred HHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCC
Q 009517 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVG 404 (533)
Q Consensus 326 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~ 404 (533)
+..+ . ..++|++.||||.+ |++|+|+||+++ .++++++.+.+... ..++++.+.|.++..+|++..
T Consensus 235 ~~~~-------~-~~~~i~~~S~SK~~-g~~G~RiG~~~~--~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~-- 301 (427)
T 2hox_A 235 PIKY-------K-ADEDILLFTMSKFT-GHSGSRFGWALI--KDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVV-- 301 (427)
T ss_dssp CCCS-------C-BCCSEEEEEHHHHT-SCGGGCCEEEEE--CCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH--
T ss_pred cccc-------C-CCceEEEEeChhcC-CCCCceEEEEEE--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcch--
Confidence 2111 1 23569999999998 899999999998 24899999988776 557889999999988885310
Q ss_pred ChhHH-----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE--------------ecCCceeEEecccCCCHHHHHHHH
Q 009517 405 DESYE-----SYCAERDGILSSLARRAKTLEDAFNSLEGITC--------------NKAEGAMYLFPRIQLPEKAIKAAE 465 (533)
Q Consensus 405 ~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--------------~~~~gg~~~~~~~~~~~~~~~~~~ 465 (533)
.+- .+.++++.+++.++++++++.+.|++++|+.+ ..|++++|+|++++.
T Consensus 302 --~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--------- 370 (427)
T 2hox_A 302 --AMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW--------- 370 (427)
T ss_dssp --HHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS---------
T ss_pred --hhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC---------
Confidence 000 01234567788899999999999998766543 457789999987652
Q ss_pred hcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHH
Q 009517 466 AEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 466 ~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~ 525 (533)
+...++..+++++||.++||..|+. +.++||||++.++++|++++++|+++++
T Consensus 371 -----~~~~~~~~ll~~~gI~v~pg~~f~~--~~~~~Ris~~~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 371 -----EEDKDCYQTFQNGRINTQNGVGFEA--SSRYVRLSLIKTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp -----GGGCSHHHHHHHTTEECEEGGGGTS--CTTEEEEECSSCHHHHHHHHHHHHHHHT
T ss_pred -----cHHHHHHHHHHHCCEEEcCCCccCC--CCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 1233456777789999999999984 4569999999888899999999998874
No 80
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.3e-37 Score=316.20 Aligned_cols=331 Identities=16% Similarity=0.210 Sum_probs=256.1
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 178 (533)
+|+|+.|.|.+ +. |+.+++++.+++.+... ....|++. +..+||+++++
T Consensus 28 ~i~l~~~~~~~----------------------~~-------~~~v~~a~~~~~~~~~~-~~~~y~~~-~~~~lr~~la~ 76 (360)
T 3hdo_A 28 WIKLNTNENPY----------------------PP-------SPEVVKAILEELGPDGA-ALRIYPSA-SSQKLREVAGE 76 (360)
T ss_dssp SEECSSCCCSS----------------------CC-------CHHHHHHHHHHHTTTCG-GGGSCCCS-SCHHHHHHHHH
T ss_pred eeeccCCCCCC----------------------CC-------CHHHHHHHHHHHhcccc-hhhcCCCC-chHHHHHHHHH
Confidence 99999999864 22 78999999888875211 14567655 57999999999
Q ss_pred HHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 179 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 179 ~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
+++ +++++|++|+|+++++..+++.++ ++||+|+++.|+|.++...++..|++++.+++++ ++.+ ++++
T Consensus 77 ~~g------~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~ 145 (360)
T 3hdo_A 77 LYG------FDPSWIIMANGSDEVLNNLIRAFA-AEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFP 145 (360)
T ss_dssp HHT------CCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCC
T ss_pred HhC------cCcceEEEcCCHHHHHHHHHHHHh-CCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHH
Confidence 985 678899999999999999999998 8999999999999999999999999999999865 3444 4443
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCC
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (533)
+.+ +++++++++|+||||.+++. ++|.++|+++|+++|+||+|.+|. +. ...+ +...
T Consensus 146 ~~~--------~~~~v~i~~p~nptG~~~~~---~~l~~l~~~~~~~li~De~~~~~~--~~-~~~~---~~~~------ 202 (360)
T 3hdo_A 146 ERY--------EGKVFFLTTPNAPLGPSFPL---EYIDELARRCAGMLVLDETYAEFA--ES-NALE---LVRR------ 202 (360)
T ss_dssp SSB--------CSSEEEEESSCTTTCCCCCH---HHHHHHHHHBSSEEEEECTTGGGS--SC-CCTH---HHHH------
T ss_pred hhc--------CCCEEEEeCCCCCCCCCcCH---HHHHHHHHHCCCEEEEECChHhhC--Cc-chhH---Hhcc------
Confidence 322 46799999999999999995 556667889999999999999853 32 2222 2111
Q ss_pred CceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHH
Q 009517 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (533)
Q Consensus 339 ~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 418 (533)
..+++++.||||.+ |++|+|+||+++ ++++++.+..... .+++++++|.++..+|+. .++++++
T Consensus 203 ~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~-----------~~~~~~~ 266 (360)
T 3hdo_A 203 HENVVVTRTLSKSY-SLAGMRIGLAIA---RPEVIAALDKIRD-HYNLDRLAQAACVAALRD-----------QAYLSEC 266 (360)
T ss_dssp CSSEEEEEESTTTT-SCTTSCCEEEEC---CHHHHHHHHHHSC-SCCSCHHHHHHHHHHHHC-----------HHHHHHH
T ss_pred CCCEEEEecchHhh-cCCccceeeEee---CHHHHHHHHHhCC-CCCCCHHHHHHHHHHhcC-----------HHHHHHH
Confidence 23578999999999 889999999998 9999999887654 478899999999988853 2346778
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
+++++++++.+.+.|+++ |+.+.++.+. |+|+.++ . . +...+. +.|.++||.+.||..++ +
T Consensus 267 ~~~~~~~~~~l~~~L~~~-~~~~~~~~~~-~~~~~~~--~----------~-~~~~l~-~~l~~~gi~v~~~~~~~---~ 327 (360)
T 3hdo_A 267 CRRIRETREWFTTELRSI-GYDVIPSQGN-YLFATPP--D----------R-DGKRVY-DGLYARKVLVRHFSDPL---L 327 (360)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEECCCSSS-EEEEECT--T----------C-CHHHHH-HHHHHTTEECBCCCSTT---T
T ss_pred HHHHHHHHHHHHHHHHHC-CCEEcCCCcc-EEEEECC--C----------C-CHHHHH-HHHHHCCEEEEECCCCC---C
Confidence 888999999999999998 8888766655 5665443 1 1 233444 45667899999977632 2
Q ss_pred CceEEEEecCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTILPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 499 ~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
.++|||+++ +++++++++++|+++.+..-++
T Consensus 328 ~~~iRis~~-~~~e~~~l~~al~~~~~~~~~~ 358 (360)
T 3hdo_A 328 AHGMRISIG-TREEMEQTLAALKEIGEGHHHH 358 (360)
T ss_dssp TTSEEEECC-CHHHHHHHHHHHHHHHC-----
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHHHhcccccc
Confidence 349999998 6788999999998877665544
No 81
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=1.1e-35 Score=306.13 Aligned_cols=329 Identities=12% Similarity=0.092 Sum_probs=253.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+.+++.+.+..... ....|.+..|..++++++++++.+.+|. +++++|+|+++|+..+++.++ ++||+|++
T Consensus 59 ~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~a~~~~~~~~~-~~gd~V~~ 132 (398)
T 3a2b_A 59 DTRIIKAAQDALEKYGT-GCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQSNLGPLSCLM-GRNDYILL 132 (398)
T ss_dssp CHHHHHHHHHHHHHHCS-CCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHHHHHHHHHHSS-CTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCC-CCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHHHHHHHHHHHh-CCCCEEEE
Confidence 68899998888865322 2345777788889999999999888773 589999999999999999998 89999999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+.|+|..+...++..|++++.++. +|++++++.+++... .++++|++++|+||||.+++ +++|+++|+
T Consensus 133 ~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~---~~~l~~~~~ 200 (398)
T 3a2b_A 133 DERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVN---LPELTSIAN 200 (398)
T ss_dssp ETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCC---HHHHHHHHH
T ss_pred CCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccC---HHHHHHHHH
Confidence 999999999999999999999885 489999999875210 15889999999999999998 899999999
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHh-
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV- 379 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~- 379 (533)
+||+++|+||+|..+.|+.. ..++.... ++ .+..++++.||||.+ |++| ||+++ ++++++.+...
T Consensus 201 ~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~----~~~~di~~~s~sK~~-~~~G---G~~~~---~~~~~~~l~~~~ 266 (398)
T 3a2b_A 201 EFDAAVMVDDAHSLGVIGHK--GAGTASHF-GL----NDDVDLIMGTFSKSL-ASLG---GFVAG---DADVIDFLKHNA 266 (398)
T ss_dssp HHTCEEEEECTTTTTTSSGG--GCCHHHHH-TC----GGGCSEEEEESSSTT-CSSC---EEEEE---CHHHHHHHHHHC
T ss_pred HcCcEEEEECCCcccccCCC--CCchHhhc-CC----CcCCeEEEecccccc-cCCC---cEEEe---CHHHHHHHHHhc
Confidence 99999999999998776321 12322221 11 111138899999999 7778 99998 89999988775
Q ss_pred hh-ccccCChHHHH-HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCC
Q 009517 380 AS-VNLCSNISGQI-LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLP 457 (533)
Q Consensus 380 ~~-~~~~~~~~~q~-a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~ 457 (533)
.. ...+++...|. ++..+|+ ..++.++++++++++++++.+.|+++ |+.+..+.| +++|+.++
T Consensus 267 ~~~~~~~~~~~~~~a~~~~~l~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g-~~~~~~~~-- 331 (398)
T 3a2b_A 267 RSVMFSASMTPASVASTLKALE-----------IIQNEPEHIEKLWKNTDYAKAQLLDH-GFDLGATES-PILPIFIR-- 331 (398)
T ss_dssp HHHHSSBCCCHHHHHHHHHHHH-----------HHHHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSCCS-SEEEEECC--
T ss_pred ccceecCCCCHHHHHHHHHHHH-----------HHhhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCCCC-CEEEEEcC--
Confidence 22 33344445554 4556663 12345678888999999999999998 888877775 67776553
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 458 EKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+. +...++..++ ++||.+.||..|+...+.+++||+++ .+++++++++++|+++++++
T Consensus 332 ~~~----------~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 332 SNE----------KTFWVTKMLQ-DDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp CHH----------HHHHHHHHHH-HTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CHH----------HHHHHHHHHH-HCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 211 1334455555 45999999998864334569999997 59999999999999998764
No 82
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.8e-36 Score=304.75 Aligned_cols=301 Identities=18% Similarity=0.262 Sum_probs=236.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+++... ....|++. +..++|+++++++++. .+++++|++|+|+++++..+++.+ ||+|++
T Consensus 34 ~~~v~~a~~~~~~~~---~~~~y~~~-~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~~~~~~~----gd~Vl~ 102 (335)
T 1uu1_A 34 PEDLVDEVFRRLNSD---ALRIYYDS-PDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIYVMMLMF----DRSVFF 102 (335)
T ss_dssp CHHHHHHHHHTCCGG---GGGSCCCS-SCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHHHHHHHS----SEEEEC
T ss_pred CHHHHHHHHHHhhhh---hhhcCCCC-chHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHHHHHHHh----CCcEEE
Confidence 788999888877321 25668654 6999999999999743 356789999999999999999987 789999
Q ss_pred cCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
+ |+|+++...++..|.+++.+++++ +|++|++++ + ++++|++++||||||.+++.+++++|+++|
T Consensus 103 ~-p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~- 167 (335)
T 1uu1_A 103 P-PTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKTG- 167 (335)
T ss_dssp S-SSCHHHHHHHHHHTCEEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTT-
T ss_pred C-CCcHHHHHHHHHcCCeEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhC-
Confidence 9 999999999999999999998863 578888877 2 689999999999999999988888888877
Q ss_pred HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh
Q 009517 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (533)
Q Consensus 301 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~ 380 (533)
| ++|+||+|.++.+. +..+ +.. ...+++++.||||.+ |++|+|+||+++ ++++++.+....
T Consensus 168 --~-~li~De~~~~~~~~---~~~~---~~~------~~~~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~ 228 (335)
T 1uu1_A 168 --A-FVALDEAYYEFHGE---SYVD---FLK------KYENLAVIRTFSKAF-SLAAQRVGYVVA---SEKFIDAYNRVR 228 (335)
T ss_dssp --C-EEEEECTTHHHHCC---CCGG---GGG------TCSSEEEEEESTTTT-TCGGGCCEEEEE---CHHHHHHHHHHS
T ss_pred --C-EEEEECcchhhcch---hHHH---Hhh------hCCCEEEEecchhhc-CCcccCeEEEEe---CHHHHHHHHHhc
Confidence 7 89999999986532 1111 111 223578999999998 889999999998 999999887765
Q ss_pred hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHH
Q 009517 381 SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 381 ~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~ 460 (533)
. .+++++++|.++.++|+. .+++++++++++++++++.+.|+++ |+.+. +.+++|+|++++ ..
T Consensus 229 ~-~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~--~~- 291 (335)
T 1uu1_A 229 L-PFNVSYVSQMFAKVALDH-----------REIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFVFME--KE- 291 (335)
T ss_dssp C-TTCSCHHHHHHHHHHHHT-----------HHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECC--TH-
T ss_pred C-CCCcCHHHHHHHHHHhCC-----------HHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCCCeEEEEECC--CC-
Confidence 3 468899999999988852 1345677888899999999999987 77765 455678886554 20
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
+...++.. |.++||.+.|+ . +++||+++. ++++++++++|+++
T Consensus 292 ----------~~~~~~~~-l~~~gi~v~~~------~--~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 ----------EKERLLEH-LRTKNVAVRSF------R--EGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp ----------HHHHHHHH-HHHHTEEEEEE------T--TEEEEECCC-HHHHHHHHHHHHCC
T ss_pred ----------CHHHHHHH-HHHCCEEEEEC------C--CeEEEEeCC-HHHHHHHHHHHHhh
Confidence 12344444 44689999981 2 389999975 45688888888754
No 83
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.8e-33 Score=287.92 Aligned_cols=325 Identities=12% Similarity=0.092 Sum_probs=248.0
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 138 GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 138 ~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
..+|+.+++++.+.+. ..|++. ..++++++++++.+.+|.+ ++++|++|+|+++|+..+++.++ ++||+
T Consensus 29 ~~~~~~v~~a~~~~~~-------~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~-~~gd~ 97 (386)
T 2dr1_A 29 VACFPEVLEIMKVQMF-------SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGV-SKGGK 97 (386)
T ss_dssp CCCCHHHHHHTTSCCC-------CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHS-CTTCE
T ss_pred cCCcHHHHHHHhcccc-------cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhh-cCCCe
Confidence 3346777766544332 245432 4788888999888888865 46789999999999999999998 79999
Q ss_pred EEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 218 ILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 218 Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
|++++|+|++ +...+...|++++.++.+. ++.+|+++|++++++ .+++++|++++|+||||.+.+ +++|
T Consensus 98 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i 168 (386)
T 2dr1_A 98 VLVTIIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRK----NPDVEAVTITYNETSTGVLNP---LPEL 168 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHH
T ss_pred EEEEcCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhc----CCCCcEEEEEeecCCcchhCC---HHHH
Confidence 9999999998 8888899999999999875 567999999999964 227899999999999999988 8999
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
+++|++||+++|+||+|..+.+. .++ ..+ . .++++.|+||++ +.+ .++||+++ ++++++.
T Consensus 169 ~~l~~~~~~~li~D~a~~~~~~~-----~~~----~~~---~---~di~~~s~sK~~-~~~-~g~G~~~~---~~~~~~~ 228 (386)
T 2dr1_A 169 AKVAKEHDKLVFVDAVSAMGGAD-----IKF----DKW---G---LDVVFSSSQKAF-GVP-PGLAIGAF---SERFLEI 228 (386)
T ss_dssp HHHHHHTTCEEEEECTTTBTTBC-----CCT----TTT---T---CSEEEEETTSTT-CCC-SSCEEEEE---CHHHHHH
T ss_pred HHHHHHcCCeEEEEccccccCcc-----ccc----ccc---C---CcEEEEeccccc-cCC-CceEEEEE---CHHHHHH
Confidence 99999999999999999875431 111 111 1 248899999998 444 24899998 8888877
Q ss_pred HH----------------Hhh---hccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHh
Q 009517 376 IY----------------KVA---SVNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 376 l~----------------~~~---~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~ 434 (533)
+. ... ..+++++.+.+.++..+|+ .+.++ +++++++++++++++.+.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~----------~~~~~g~~~~~~~~~~~~~~~l~~~L~ 298 (386)
T 2dr1_A 229 AEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALR----------IIEKMGGKEKWLEMYEKRAKMVREGVR 298 (386)
T ss_dssp HTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHH----------HHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH----------HHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 62 221 2446778888888887774 12222 56788889999999999999
Q ss_pred cCCCceEecCCc---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CC
Q 009517 435 SLEGITCNKAEG---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQ 509 (533)
Q Consensus 435 ~~~g~~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~ 509 (533)
++ |+.+..+.+ +.++|+.++ .+ . +...++..++ ++||.+.||..|. +.+++||++. .+
T Consensus 299 ~~-g~~~~~~~~~~~~~~~~~~~~--~~---------~-~~~~~~~~l~-~~gi~v~~~~~~~---~~~~iRi~~~~~~~ 361 (386)
T 2dr1_A 299 EI-GLDILAEPGHESPTITAVLTP--PG---------I-KGDEVYEAMR-KRGFELAKGYGSV---KEKTFRIGHMGYMK 361 (386)
T ss_dssp HT-TCCBSSCTTCBCSSEEEEECC--TT---------C-CHHHHHHHHH-HTTEECEECCGGG---TTTEEEEECCSSCC
T ss_pred Hc-CCeeCcCccccCCceEEEEcC--CC---------C-CHHHHHHHHH-HCCeEEecCcccc---CCCEEEEECCCCCC
Confidence 98 888877753 556675543 11 1 2344555555 4599999998664 2239999997 79
Q ss_pred cCcHHHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~~~ 529 (533)
++++++++++|+++++++..
T Consensus 362 ~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 362 FEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987754
No 84
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=4e-33 Score=286.77 Aligned_cols=329 Identities=14% Similarity=0.118 Sum_probs=243.6
Q ss_pred CHHHHHHHHHHHhcCCC---CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
++.+.+++.+.+.+... .....|+...+..+|+++++++++ . ++.|++++ |++++..+++.++ ++||.
T Consensus 59 ~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~i~~~s-Gt~a~~~~l~~~~-~~gd~ 129 (399)
T 3tqx_A 59 HPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDTILYSS-CFDANGGLFETLL-GPEDA 129 (399)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEEEEESC-HHHHHHTTHHHHC-CTTCE
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcEEEECc-hHHHHHHHHHHhc-CCCCE
Confidence 68888888888765321 011223345557889999998874 2 24555555 5789999999998 89999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|..+...++..|.+++.++. +|++++++.+++....+.++++|++++|+||||.+++ +++|++
T Consensus 130 v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~ 199 (399)
T 3tqx_A 130 IISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD---LKSICD 199 (399)
T ss_dssp EEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC---HHHHHH
T ss_pred EEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC---HHHHHH
Confidence 999999999999999999999999885 3678999999876544457999999999999999999 999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||+++|+||+|....+... ..+.... .++ .....+++.||||++ + |.+.||+++ ++++++.+.
T Consensus 200 l~~~~~~~li~De~~~~~~~~~~--~~~~~~~-~~~----~~~~di~~~s~sK~~-~--g~~gG~~~~---~~~~~~~~~ 266 (399)
T 3tqx_A 200 LADKYNALVMVDDSHAVGFIGEN--GRGTPEY-CGV----ADRVDILTGTLGKAL-G--GASGGYTSG---HKEIIEWLR 266 (399)
T ss_dssp HHHHTTCEEEEECTTTTTTSSTT--SCCHHHH-HTC----TTCCSEEEEESSSSS-C--SSCCEEEEE---CHHHHHHHH
T ss_pred HHHHcCCEEEEECCccccccCCC--CCchHHh-hCC----CCCCcEEEecchHhc-c--cCceEEEEc---CHHHHHHHH
Confidence 99999999999999963223221 1222222 111 011238899999998 4 455599998 999999887
Q ss_pred Hhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecc
Q 009517 378 KVAS---VNLCSNISGQILASLVMSPPKVGDESYESYC-AERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPR 453 (533)
Q Consensus 378 ~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~ 453 (533)
.... .+.+.+++.+.++..+++ +. ++.++++++++++++++.+.|+++ |+.+.++.+++ +|+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~ 333 (399)
T 3tqx_A 267 NRSRPYLFSNTVAPVIVATSLKVLE-----------LLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLVPGNHPI-IPVM 333 (399)
T ss_dssp HHCHHHHSSCCCCHHHHHHHHHHHH-----------HHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSSE-EEEE
T ss_pred HhCcceeccCCCcHHHHHHHHHHHH-----------HHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEE
Confidence 7532 233567777777777663 22 446788899999999999999998 88888777765 5544
Q ss_pred cCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 454 IQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
++... +...++..++ ++||.+.|+..+....+.+++||+++ .+++++++++++|+++++++
T Consensus 334 ~~~~~------------~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 334 LGDAQ------------LATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp EECHH------------HHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eCCHH------------HHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 43111 1344454554 57999999766543455669999996 78899999999999998764
No 85
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.1e-33 Score=290.70 Aligned_cols=324 Identities=16% Similarity=0.200 Sum_probs=246.0
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCC--CcccHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHh----
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSH--SQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLL---- 210 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~--~~G~~~lr~aia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l---- 210 (533)
|+.+++++.+.+.+.... ....|++ ..+..+++++++++++ . ++++|++|+|+++|+..+++.+
T Consensus 41 ~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~~~~~~ 114 (420)
T 1t3i_A 41 PRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIVYTRNATEAINLVAYSWGMNN 114 (420)
T ss_dssp CHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEEEESSHHHHHHHHHHHTHHHH
T ss_pred CHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEEEcCChHHHHHHHHHHhhhcc
Confidence 788999998888763210 1345654 5678899999999975 3 5689999999999999999999
Q ss_pred ccCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 211 IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 211 ~~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
. ++||+|+++.|+|+. +...++..|++++.++.+. ++.+|++++++++++ ++++|++++|+||||.+
T Consensus 115 ~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~ 185 (420)
T 1t3i_A 115 L-KAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSE------KTKLVTVVHISNTLGCV 185 (420)
T ss_dssp C-CTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCT------TEEEEEEESBCTTTCBB
T ss_pred c-CCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC--CCCcCHHHHHHhhCC------CceEEEEeCCcccccCc
Confidence 7 799999999999998 5667778899999999873 567999999999976 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++ +++|+++|++||+++|+||+|..+.. + .++.. + ..+ +++.|+||.+ |++| +||+++
T Consensus 186 ~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~-~~~~~----~---~~d---i~~~s~sK~~-~~~g--~G~~~~- 243 (420)
T 1t3i_A 186 NP---AEEIAQLAHQAGAKVLVDACQSAPHY----P-LDVQL----I---DCD---WLVASGHKMC-APTG--IGFLYG- 243 (420)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECTTTTTTS----C-CCHHH----H---TCS---EEEEEGGGTT-SCTT--CEEEEE-
T ss_pred CC---HHHHHHHHHHcCCEEEEEhhhccCCc----c-Cchhh----c---CCC---EEEEehhhhc-CCCc--eEEEEE-
Confidence 99 89999999999999999999985322 1 12222 2 234 7899999977 7677 899998
Q ss_pred cCCHHHHHHHHHhhh---------------------ccccCChHHHHHHHH-HcCCCCCCChhHHHHHH--HHHHHHHHH
Q 009517 367 GFSAEVREQIYKVAS---------------------VNLCSNISGQILASL-VMSPPKVGDESYESYCA--ERDGILSSL 422 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~---------------------~~~~~~~~~q~a~~~-~L~~~~~~~~~~~~~~~--~~~~~~~~~ 422 (533)
++++++.+..... ...+.+.+.+.++.. +++ +.. .++.+.+++
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~-----------~~~~~~~~~~~~~~ 310 (420)
T 1t3i_A 244 --KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVD-----------YLTDLGMENIHNYE 310 (420)
T ss_dssp --CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHH-----------HHHHHCHHHHHHHH
T ss_pred --chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHH-----------HHHHhHHHHHHHHH
Confidence 8888887755431 112455666655443 342 111 256778889
Q ss_pred HHHHHHHHHHHhcCCCceEecCC------ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 423 ARRAKTLEDAFNSLEGITCNKAE------GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 423 ~~~~~~l~~~L~~~~g~~~~~~~------gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
+++++++.+.|++++|+.+..+. ++++.| .++ . . +...++ +.|.++||.+.||..|...
T Consensus 311 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-~~~--~----------~-~~~~~~-~~l~~~gi~v~~~~~~~~~ 375 (420)
T 1t3i_A 311 VELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASF-NVA--G----------L-HASDVA-TMVDQDGIAIRSGHHCTQP 375 (420)
T ss_dssp HHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEE-EET--T----------B-CHHHHH-HHHHTTTEECBCSCTTCHH
T ss_pred HHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEE-EEC--C----------C-CHHHHH-HHHHHCCeEEeeccccchH
Confidence 99999999999998899888774 677665 343 1 1 123333 5677899999999755311
Q ss_pred ----CC-CceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 497 ----PG-TWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 497 ----~g-~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
-+ .+++||++. .+++++++++++|+++++.+.+
T Consensus 376 ~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 376 LHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp HHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 01 348999997 5889999999999999887643
No 86
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=2e-33 Score=289.53 Aligned_cols=327 Identities=15% Similarity=0.118 Sum_probs=243.7
Q ss_pred CHHHHHHHHHHHhcCCC-CCccccC--CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG-RATGAYS--HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~-~~~~~Y~--~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+++++.+.+..... .....|. ...+..+|+++++++++ .+ +.|++++| ++++..+++.++ ++||.
T Consensus 61 ~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~~i~~~sG-s~a~~~~~~~~~-~~gd~ 131 (401)
T 1fc4_A 61 HPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG------ME-DAILYSSC-FDANGGLFETLL-GAEDA 131 (401)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT------CS-EEEEESCH-HHHHHTTHHHHC-CTTCE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC------CC-cEEEeCCh-HHHHHHHHHHHc-CCCCE
Confidence 68899998888765221 0011332 35678899999999984 33 55655554 779999999988 89999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|..+...+...|.+++.++. .|++++++.+++....+.++++|++++|+||||.+++ +++|++
T Consensus 132 v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---~~~i~~ 201 (401)
T 1fc4_A 132 IISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN---LKGVCD 201 (401)
T ss_dssp EEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC---HHHHHH
T ss_pred EEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC---HHHHHH
Confidence 999999999888888989999988873 4799999999865333336889999999999999999 999999
Q ss_pred HHHHcCCEEEEccccc-cccc-cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQ-ENVY-VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 298 l~~~~~~~lI~De~y~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
+|++||+++|+||+|. ++.+ ++. ... .. .++ .++ .++++.||||+++|++ .||+++ ++++++.
T Consensus 202 l~~~~~~~li~De~~~~g~~~~~g~-~~~---~~-~~~---~~~-~di~~~s~sK~~~~~~---gG~~~~---~~~~~~~ 266 (401)
T 1fc4_A 202 LADKYDALVMVDDSHAVGFVGENGR-GSH---EY-CDV---MGR-VDIITGTLGKALGGAS---GGYTAA---RKEVVEW 266 (401)
T ss_dssp HHHHTTEEEEEECTTTTTTSSTTSC-CHH---HH-TTC---TTC-CSEEEEESSSTTCSSS---CEEEEE---CHHHHHH
T ss_pred HHHHcCCEEEEECcccccccCCCCC-ccH---HH-cCC---CcC-CcEEEecchhhccCCC---CEEEEc---CHHHHHH
Confidence 9999999999999995 7653 232 211 11 112 222 3488999999984434 499998 8999988
Q ss_pred HHHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEec
Q 009517 376 IYKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452 (533)
Q Consensus 376 l~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~ 452 (533)
+..... .+++.+++.+.++..+|+ +.++.+.++++++++++++.+.|+++ |+.+++ ..+.++|+
T Consensus 267 l~~~~~~~~~~~~~~~~~~~a~~~~l~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~ 333 (401)
T 1fc4_A 267 LRQRSRPYLFSNSLAPAIVAASIKVLE-----------MVEAGSELRDRLWANARQFREQMSAA-GFTLAG-ADHAIIPV 333 (401)
T ss_dssp HHHHCHHHHHSCCCCHHHHHHHHHHHH-----------HHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCC-SSSSEEEE
T ss_pred HHHhCcCceeCCCCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCcccC-CCCCEEEE
Confidence 876542 345788899988888773 22223567788899999999999998 888774 45566776
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+++. .. +...++.. |.++||.+.||..|+.+.+.+++||++. .+++++++++++|+++++++
T Consensus 334 ~~~~--~~----------~~~~l~~~-l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 334 MLGD--AV----------VAQKFARE-LQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp EEEC--HH----------HHHHHHHH-HHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred EcCC--hH----------HHHHHHHH-HHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 6541 10 12334444 4567999999998875445569999997 78999999999999998764
No 87
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1.3e-33 Score=291.11 Aligned_cols=291 Identities=15% Similarity=0.155 Sum_probs=221.8
Q ss_pred ccccCCCcccH---HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HH
Q 009517 160 TGAYSHSQGIK---GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SI 232 (533)
Q Consensus 160 ~~~Y~~~~G~~---~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~ 232 (533)
.+.|+. .|.+ +|+++++++++ . +++++++|+++|+..+++.++ ++||+|+++.|+|+.+.. .+
T Consensus 53 ~~~Y~~-~~~~~~~~l~~~ia~~~g------~--~~~i~~~~g~~ai~~~~~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~ 122 (404)
T 1e5e_A 53 GYIYTR-LGNPTVSNLEGKIAFLEK------T--EACVATSSGMGAIAATVLTIL-KAGDHLISDECLYGCTHALFEHAL 122 (404)
T ss_dssp SCCBTT-TCCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHC-CTTCEEEEESCCCHHHHHHHHTHH
T ss_pred CccccC-CcChHHHHHHHHHHHHhC------C--CcEEEeCChHHHHHHHHHHHh-CCCCEEEEeCCCchhHHHHHHHHH
Confidence 566877 5566 89999999974 2 478888888999999999988 799999999999999888 77
Q ss_pred HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEccc
Q 009517 233 ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADEV 311 (533)
Q Consensus 233 ~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~-~~~~lI~De~ 311 (533)
+..|++++.++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+||+
T Consensus 123 ~~~g~~~~~v~~~-------d~~~l~~~i~~------~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De~ 186 (404)
T 1e5e_A 123 TKFGIQVDFINTA-------IPGEVKKHMKP------NTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNT 186 (404)
T ss_dssp HHTTCEEEEECTT-------STTHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECT
T ss_pred HHcCCEEEEECCC-------CHHHHHHhcCC------CCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEECC
Confidence 8899999999864 67899998876 7999999999999999997 9999999999 9999999999
Q ss_pred cccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHH-HHHHhhhc--cccCC
Q 009517 312 YQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVASV--NLCSN 387 (533)
Q Consensus 312 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~-~l~~~~~~--~~~~~ 387 (533)
|..+.+. .+ + ++ .. ++++.|+||++ +++|+|+ ||+++ ++++++ .+...... +.+.+
T Consensus 187 ~~~~~~~--~~---~-----~~---~~---di~~~S~sK~~-~~~g~ri~G~~~~---~~~~~~~~l~~~~~~~~g~~~~ 246 (404)
T 1e5e_A 187 FCSPMIT--NP---V-----DF---GV---DVVVHSATKYI-NGHTDVVAGLICG---KADLLQQIRMVGIKDITGSVIS 246 (404)
T ss_dssp TTCTTTC--CG---G-----GG---TC---SEEEEETTTTT-TCSSCCCCEEEEE---CHHHHHHHHHTCCCCCCCCCCC
T ss_pred CchhhhC--Cc---c-----cc---CC---EEEEEcCcccc-CCCCCCeEEEEEE---CHHHHHHHHHHHHHhCCCCCCC
Confidence 9987653 11 1 11 22 38899999999 7899998 99998 888887 77766543 45678
Q ss_pred hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CCceEecCC----ceeE
Q 009517 388 ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL--------------EGITCNKAE----GAMY 449 (533)
Q Consensus 388 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------------~g~~~~~~~----gg~~ 449 (533)
++.+.++...|+.. ....++..++.+.+.+.|++. ||+.+..++ |+|+
T Consensus 247 ~~~~~~~~~~l~~~--------------~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~ 312 (404)
T 1e5e_A 247 PHDAWLITRGLSTL--------------NIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMI 312 (404)
T ss_dssp HHHHHHHHHHHTTH--------------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHhHhHH--------------HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEE
Confidence 88998888887521 112222233334444444433 455554444 8888
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC----------------------CCC--CceEEEE
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ----------------------VPG--TWHFRCT 505 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~----------------------~~g--~~~iRis 505 (533)
.| +++. ....+.+++++.|| +.+|..||. ..| .++||||
T Consensus 313 ~~-~~~~---------------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis 375 (404)
T 1e5e_A 313 TF-ILKS---------------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLS 375 (404)
T ss_dssp EE-EETT---------------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEE
T ss_pred EE-EeCC---------------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEE
Confidence 88 5541 11224567888999 777777762 022 4699999
Q ss_pred ecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 506 ILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 506 ~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
++. |++++++++|+++++...+
T Consensus 376 ~g~--e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 376 VGI--EDADELIADFKQGLDALLR 397 (404)
T ss_dssp CCS--SCHHHHHHHHHHHHHHHHC
T ss_pred eCC--CCHHHHHHHHHHHHHHHHH
Confidence 988 7899999999999988764
No 88
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.8e-33 Score=288.94 Aligned_cols=320 Identities=14% Similarity=0.133 Sum_probs=243.0
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCC
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
+...|+.+++++.+.+.. .|++. ..++++++++++.+.+|. +++ +|++|+|+++|+..+++.++ ++|
T Consensus 42 ~~~~~~~v~~a~~~~~~~-------~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~-~~g 109 (393)
T 1vjo_A 42 PSNAHPSVLQAMNVSPVG-------HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAV-EPG 109 (393)
T ss_dssp CCCCCHHHHHHHSSCCCC-------TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHC-CTT
T ss_pred CCCCCHHHHHHHhccccc-------ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhcc-CCC
Confidence 444578877776554321 45542 568888888888888784 567 89999999999999999998 899
Q ss_pred CeEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHH
Q 009517 216 DGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (533)
Q Consensus 216 d~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~ 293 (533)
|+|++++|+|++ +...++..|++++.++++. ++.+|+++|++++++. ++++|++++|+||||.+++ ++
T Consensus 110 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---l~ 179 (393)
T 1vjo_A 110 DVVLIGVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETH-----RPAILALVHAETSTGARQP---LE 179 (393)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CT
T ss_pred CEEEEEcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhC-----CceEEEEeccCCCcceecc---HH
Confidence 999999999999 8899999999999999875 4579999999999874 5889999999999999998 89
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|+++|+++|+++|+||+|. + +..+ .++ ..+ ..+ +++.|+||++ +.+| |+||+++ +++++
T Consensus 180 ~i~~l~~~~~~~li~Dea~~---~-g~~~-~~~----~~~---~~d---i~~~s~sK~l-~~~~-~~G~l~~---~~~~~ 239 (393)
T 1vjo_A 180 GVGELCREFGTLLLVDTVTS---L-GGVP-IFL----DAW---GVD---LAYSCSQKGL-GCSP-GASPFTM---SSRAI 239 (393)
T ss_dssp THHHHHHHHTCEEEEECTTT---T-TTSC-CCT----TTT---TCS---EEECCSSSTT-CSCS-SCEEEEE---CHHHH
T ss_pred HHHHHHHHcCCEEEEECCcc---c-cCcC-Ccc----ccc---Ccc---EEEEcCcccc-cCCC-ceEEEEE---CHHHH
Confidence 99999999999999999998 2 2211 111 111 223 7899999998 5566 9999998 88888
Q ss_pred HHHHHh----h----------------hccc-cCChHHHHHHHHHcCCCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHH
Q 009517 374 EQIYKV----A----------------SVNL-CSNISGQILASLVMSPPKVGDESYESYC-AERDGILSSLARRAKTLED 431 (533)
Q Consensus 374 ~~l~~~----~----------------~~~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 431 (533)
+.+... . ...+ +++.+.+.++..+|+. .. ..++.++++++++++++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~----------~~~~~~~~~~~~~~~~~~~l~~ 309 (393)
T 1vjo_A 240 EKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRL----------IAQEGLANCWQRHQKNVEYLWE 309 (393)
T ss_dssp HHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH----------HHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHH----------HHHccHHHHHHHHHHHHHHHHH
Confidence 877432 0 1223 6788888888887741 11 2356788899999999999
Q ss_pred HHhcCCCceEecCCc---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c
Q 009517 432 AFNSLEGITCNKAEG---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L 507 (533)
Q Consensus 432 ~L~~~~g~~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~ 507 (533)
.|+++ |+.+..+.+ +.++++.+ |.+ . +...++..+++++||.+.||..|.. . +++||++ +
T Consensus 310 ~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~---------~-~~~~~~~~l~~~~gi~v~~g~~~~~-~--~~iRis~~~ 373 (393)
T 1vjo_A 310 RLEDI-GLSLHVEKEYRLPTLTTVCI--PDG---------V-DGKAVARRLLNEHNIEVGGGLGELA-G--KVWRVGLMG 373 (393)
T ss_dssp HHHHT-TCCBSSCGGGBCSSEEEEEC--CTT---------C-CHHHHHHHHHHHHCEECEECCGGGT-T--TEEEEECCG
T ss_pred HHHHc-CCcccCCccccCCcEEEEEc--CCC---------C-CHHHHHHHHHhhCCEEEecCccccC-C--CEEEEeCCc
Confidence 99998 888877765 22344333 211 1 2445555555545999999997752 2 3999995 3
Q ss_pred --CCcCcHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l 524 (533)
.+++++++++++|++++
T Consensus 374 ~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 374 FNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp GGCSHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHh
Confidence 45667999999998876
No 89
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=6.2e-33 Score=285.75 Aligned_cols=323 Identities=13% Similarity=0.142 Sum_probs=243.7
Q ss_pred CHHHHHHHHHHHhcCCCC-----CccccCCCcccHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHh----
Q 009517 141 SADSIERAWQILDQIPGR-----ATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLL---- 210 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~-~~~~i~~t~G~~~al~~~~~~l---- 210 (533)
|+.+++++.+++.+.... ....|.+..+..++|++++++++ . ++++|++|+|+++|+..+++.+
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~~~~~~ 109 (406)
T 1kmj_A 36 PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEELVFVRGTTEGINLVANSWGNSN 109 (406)
T ss_dssp CHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEEEESSHHHHHHHHHHHTHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEEEeCChhHHHHHHHHHhhhhc
Confidence 788999998888763210 01123456778899999999875 3 5689999999999999999999
Q ss_pred ccCCCCeEEEcCCcCcch----HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 211 IRSENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 211 ~~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
. ++||+|+++.|+|++. ...++..|++++.++.++ ++.+|+++|++++++ ++++|++++|+||||.+
T Consensus 110 ~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~ 180 (406)
T 1kmj_A 110 V-RAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDE------KTRLLAITHVSNVLGTE 180 (406)
T ss_dssp C-CTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCT------TEEEEEEESBCTTTCCB
T ss_pred C-CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhcc------CCeEEEEeCCCccccCc
Confidence 7 7999999999998764 345677899999999874 467899999999976 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEe
Q 009517 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (533)
Q Consensus 287 ~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~ 366 (533)
++ +++|+++|++||+++|+||+|..+.. + .++.. + ..+ +++.|+||.+ |++| +||+++
T Consensus 181 ~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~-~~~~~----~---~~d---~~~~s~~K~~-g~~G--~G~~~~- 238 (406)
T 1kmj_A 181 NP---LAEMITLAHQHGAKVLVDGAQAVMHH----P-VDVQA----L---DCD---FYVFSGHKLY-GPTG--IGILYV- 238 (406)
T ss_dssp CC---HHHHHHHHHHTTCEEEEECTTTTTTS----C-CCHHH----H---TCS---EEEEEGGGTT-SCTT--CEEEEE-
T ss_pred CC---HHHHHHHHHHcCCEEEEEchhhcCCC----C-Ccccc----c---CCC---EEEEEchhcc-CCCC--cEEEEE-
Confidence 99 99999999999999999999986321 1 12222 2 234 7899999998 7788 899998
Q ss_pred cCCHHHHHHHHHhhh----------------------ccccCChHHHHHHH-HHcCCCCCCChhHHHHH-HHHHHHHHHH
Q 009517 367 GFSAEVREQIYKVAS----------------------VNLCSNISGQILAS-LVMSPPKVGDESYESYC-AERDGILSSL 422 (533)
Q Consensus 367 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~a~~-~~L~~~~~~~~~~~~~~-~~~~~~~~~~ 422 (533)
++++++.+..... ...+.+.+.+.++. .+++ ... ..++.+++++
T Consensus 239 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~ 306 (406)
T 1kmj_A 239 --KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALE----------YVSALGLNNIAEYE 306 (406)
T ss_dssp --CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHH----------HHHHHCHHHHHHHH
T ss_pred --eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHH----------HHHHcCHHHHHHHH
Confidence 8988887754321 11234555655544 4442 111 1356778888
Q ss_pred HHHHHHHHHHHhcCCCceEecC--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC----
Q 009517 423 ARRAKTLEDAFNSLEGITCNKA--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV---- 496 (533)
Q Consensus 423 ~~~~~~l~~~L~~~~g~~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~---- 496 (533)
+++++++.+.|++++|+.++.+ .++++.|. ++ . . +...+. +.|.++||.+.||..|...
T Consensus 307 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~~--~----------~-~~~~~~-~~l~~~gi~v~~g~~~~~~~~~~ 371 (406)
T 1kmj_A 307 QNLMHYALSQLESVPDLTLYGPQNRLGVIAFN-LG--K----------H-HAYDVG-SFLDNYGIAVRTGHHCAMPLMAY 371 (406)
T ss_dssp HHHHHHHHHHHTTSTTEEEESCTTCCSEEEEE-ET--T----------C-CHHHHH-HHHHHTTEECEEECTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEecCCCcCCEEEEE-EC--C----------C-CHHHHH-HHHhhCCcEEEeccccchHHHHh
Confidence 9999999999999889998888 78887773 43 1 1 133334 5667789999999865310
Q ss_pred -CCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 497 -PGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 497 -~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
...++|||++. .+++++++++++|+++++.+
T Consensus 372 ~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 372 YNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp TTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 11349999997 48899999999999988754
No 90
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=9.9e-33 Score=282.60 Aligned_cols=319 Identities=13% Similarity=0.070 Sum_probs=236.9
Q ss_pred CHHHHHHHHHHHhcCCC-C--CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG-R--ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~-~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+.+++.+.+.+... . ....|....+..+||++++++++ .+ +.|++++| ++++..+++.+. ++||.
T Consensus 55 ~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~~i~~~sG-t~a~~~~~~~~~-~~gd~ 125 (384)
T 1bs0_A 55 HPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------YS-RALLFISG-FAANQAVIAAMM-AKEDR 125 (384)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHHHHC-CTTCE
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------CC-cEEEeCCc-HHHHHHHHHHhC-CCCcE
Confidence 68889988888765211 0 12223556778999999999984 32 44555555 899999999988 89999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|..+...+...|.+++.+|. .|++++++.+++. .+++++|++++||||||.+++ +++|++
T Consensus 126 v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~---~~~~~~v~~~~~~nptG~~~~---l~~i~~ 192 (384)
T 1bs0_A 126 IAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASP---CPGQQMVVTEGVFSMDGDSAP---LAEIQQ 192 (384)
T ss_dssp EEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSC---CSSCEEEEEESBCTTTCCBCC---HHHHHH
T ss_pred EEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhc---CCCCeEEEEeCCCCCCCCccC---HHHHHH
Confidence 999999999999999999999998873 4799999998752 113788888899999999999 889999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||+++|+||+|..+.+... ...+.. .++ ..++ +++.||||++ |++| ||+++ ++++++.+.
T Consensus 193 l~~~~~~~li~De~~~~~~~~~~--~~~~~~---~~~-~~~d---i~~~s~sK~~-~~~G---G~~~~---~~~~~~~l~ 256 (384)
T 1bs0_A 193 VTQQHNGWLMVDDAHGTGVIGEQ--GRGSCW---LQK-VKPE---LLVVTFGKGF-GVSG---AAVLC---SSTVADYLL 256 (384)
T ss_dssp HHHHTTCEEEEECTTTTTTSSGG--GCCHHH---HTT-CCCS---EEEEESSSTT-SSCC---EEEEE---CHHHHHHHH
T ss_pred HHHHcCcEEEEECCcccceecCC--CCchHH---hcC-CCCc---EEEeeccchh-hccC---cEEEe---CHHHHHHHH
Confidence 99999999999999987654211 111111 111 0234 8899999998 6666 99998 899998887
Q ss_pred Hhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEec
Q 009517 378 KVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452 (533)
Q Consensus 378 ~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~ 452 (533)
.... .+.+++++.+.++.++|+ ..+ +.++++++++++++++.+.|+++ |+.+.++ ++.++|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~al~-----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~ 323 (384)
T 1bs0_A 257 QFARHLIYSTSMPPAQAQALRASLA-----------VIRSDEGDARREKLAALITRFRAGVQDL-PFTLADS-CSAIQPL 323 (384)
T ss_dssp HHCHHHHSSBCCCHHHHHHHHHHHH-----------HHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEECSC-CSSBCCE
T ss_pred HhchhhhcCCCCCHHHHHHHHHHHH-----------HHhccccHHHHHHHHHHHHHHHHHHHhc-CCcccCC-CCCEEEE
Confidence 6531 234678888888777763 223 45678888999999999999998 8887654 4455665
Q ss_pred ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 453 RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
.++ ... +...++..+ .++||.+.||..|+.+.+.+++||+++ .+++++++++++|+++
T Consensus 324 ~~~--~~~----------~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 324 IVG--DNS----------RALQLAEKL-RQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EEE--SHH----------HHHHHHHHH-HHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EeC--CHH----------HHHHHHHHH-HHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 553 110 123444444 456999999998874445569999997 4889999999998764
No 91
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=3.7e-33 Score=285.27 Aligned_cols=328 Identities=14% Similarity=0.130 Sum_probs=237.6
Q ss_pred CHHHHHHHHHHHhcCCCC----CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc---C
Q 009517 141 SADSIERAWQILDQIPGR----ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---S 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~ 213 (533)
|+.+++++.+++.+.... ....|.+..+..+|+++++++++ +++++|++|+|+++|+..+++.+.. +
T Consensus 14 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t~a~~~~~~~~~~~~~~ 87 (384)
T 1eg5_A 14 DDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG------VSPSEIFFTSCATESINWILKTVAETFEK 87 (384)
T ss_dssp CHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------SCGGGEEEESCHHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEECCHHHHHHHHHHhhhhhccC
Confidence 789999999888752110 11224456678899999999985 5678999999999999999999862 5
Q ss_pred CCCeEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 214 ENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
+||+|+++.|+|+.+...+ ...|++++.++.++ ++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 88 ~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~-- 157 (384)
T 1eg5_A 88 RKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDE------DTFLVSIMAANNEVGTIQP-- 157 (384)
T ss_dssp TCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCT------TEEEEEEESBCTTTCBBCC--
T ss_pred CCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCC------CCeEEEEECCCCCcccccC--
Confidence 8999999999999886665 67899999999874 467999999999976 7999999999999999999
Q ss_pred HHHHHHHHHHHcC--CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 291 NQRAIVDFCKKEG--LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 291 ~l~~i~~l~~~~~--~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|.++|+++| ++||+||+|. |+. .+ .++ ..+ .. .+++.|+||.+ |++| +||+++
T Consensus 158 -~~~i~~l~~~~~~~~~li~Dea~~---~~~-~~-~~~----~~~---~~---di~~~s~sK~~-g~~G--~G~~~~--- 215 (384)
T 1eg5_A 158 -VEDVTRIVKKKNKETLVHVDAVQT---IGK-IP-FSL----EKL---EV---DYASFSAHKFH-GPKG--VGITYI--- 215 (384)
T ss_dssp -HHHHHHHHHHHCTTCEEEEECTTT---TTT-SC-CCC----TTT---CC---SEEEEEGGGGT-SCTT--CEEEEE---
T ss_pred -HHHHHHHHHhcCCceEEEEEhhhh---cCC-cc-cCc----hhc---CC---CEEEecHHHhc-CCCc--eEEEEE---
Confidence 789999999999 9999999997 322 11 111 111 12 37899999987 7888 799998
Q ss_pred CHHH--HHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe
Q 009517 369 SAEV--REQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN 442 (533)
Q Consensus 369 ~~~~--~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 442 (533)
++++ ...+... ....++++.+.+.++..+|+ .+.+++++++++++++++++.+.|++ +|+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~ 284 (384)
T 1eg5_A 216 RKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAME----------IAVEELSEAAKHMEKLRSKLVSGLMN-LGAHII 284 (384)
T ss_dssp CTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHH----------HHHHTHHHHHHHHHHHHHHHHHHHHT-TTCEEC
T ss_pred cCCCccccccccCcccccccCCCCChHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEe
Confidence 6654 2211111 01345778888888877774 12345677888999999999999998 488887
Q ss_pred cCC-ce--eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----------------CCceEE
Q 009517 443 KAE-GA--MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP----------------GTWHFR 503 (533)
Q Consensus 443 ~~~-gg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~----------------g~~~iR 503 (533)
.+. ++ .++++.+ +. . +...+. +.|.++||.+.||..|+... +.++||
T Consensus 285 ~~~~~~~~~~~~~~~--~~----------~-~~~~~~-~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 350 (384)
T 1eg5_A 285 TPLEISLPNTLSVSF--PN----------I-RGSTLQ-NLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIR 350 (384)
T ss_dssp SCTTSBCTTEEEEEC--TT----------C-CHHHHH-HHHHHTTEECBC------------CHHHHTTCCHHHHHHEEE
T ss_pred CCcccCCCCEEEEEe--CC----------C-CHHHHH-HHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEE
Confidence 652 21 2233222 21 1 233444 44567999999998875311 135999
Q ss_pred EEec--CCcCcHHHHHHHHHHHHHHHHHHh
Q 009517 504 CTIL--PQEDKIPAIVTRLTDFHKNFMDKF 531 (533)
Q Consensus 504 is~~--~~~e~i~~~~~~l~~~l~~~~~~~ 531 (533)
|+++ .+++++++++++|+++++++++..
T Consensus 351 i~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 380 (384)
T 1eg5_A 351 ISLCKYNTEEEVDYFLKKIEEILSFLDLTG 380 (384)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHC----
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 9997 789999999999999998876543
No 92
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=2.9e-33 Score=290.68 Aligned_cols=331 Identities=13% Similarity=0.130 Sum_probs=234.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHH---HhccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQ---LLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~---~l~~~~gd~ 217 (533)
|+.+++++.+++..... ....|.+..+..+|++++++++. | + .+++|++|+|+++|+..+++ .+. ++| +
T Consensus 59 ~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~~a~~~~~~~a~~~~-~~~-~ 130 (426)
T 1sff_A 59 HPKVVAAVEAQLKKLSH-TCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGSEAVENAVKIARAAT-KRS-G 130 (426)
T ss_dssp CHHHHHHHHHHTTTCSC-CCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHHHHHHHHHHHHHHHH-TCC-E
T ss_pred CHHHHHHHHHHHHhCCC-ccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchHHHHHHHHHHHHHhh-CCC-e
Confidence 68899999888865322 12256777889999999999973 2 1 34899999999999999988 565 565 8
Q ss_pred EEEcCCcCcchH-HHHHHhCCe-------------EEEEecCC---CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CC
Q 009517 218 ILCPIPQYPLYS-ASIALHGGT-------------LVPYYLDE---ATGWGLETSEVKKQLEAAKAKGITVRALVVI-NP 279 (533)
Q Consensus 218 Vlv~~p~~~~~~-~~~~~~g~~-------------~~~v~~~~---~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p 279 (533)
|++++|+|+++. ..+...|.+ ++.++++. ..++.+|+++|++++++.. .+.++++|+++ ++
T Consensus 131 vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~ 209 (426)
T 1sff_A 131 TIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQ 209 (426)
T ss_dssp EEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBC
T ss_pred EEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEeccc
Confidence 999999998865 455665653 66677643 1134578999999997410 01167888775 56
Q ss_pred CCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC
Q 009517 280 GNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (533)
Q Consensus 280 ~NPtG-~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ 358 (533)
+| || .++|++++++|+++|++||++||+||+|.+|.+.+. ..++.. .+. .++ +.||||++ |+ |+
T Consensus 210 ~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~--~~~---~~d-----i~s~sK~~-~~-Gl 274 (426)
T 1sff_A 210 GE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT--LFAMEQ--MGV---APD-----LTTFAKSI-AG-GF 274 (426)
T ss_dssp TT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG--TTS---CCS-----EEEECGGG-GT-SS
T ss_pred CC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc--hhhhhh--cCC---CCC-----EEEEcccc-cC-CC
Confidence 78 99 789999999999999999999999999999776542 121111 111 244 45999999 65 99
Q ss_pred eeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Q 009517 359 RGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-- 435 (533)
Q Consensus 359 riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 435 (533)
|+||+++ ++++++.+..... .++++++++|.++.++|+ +.+. ..+.++++++++.+++.|++
T Consensus 275 riG~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~-----------~~~~-~~~~~~~~~~~~~l~~~l~~~~ 339 (426)
T 1sff_A 275 PLAGVTG---RAEVMDAVAPGGLGGTYAGNPIACVAALEVLK-----------VFEQ-ENLLQKANDLGQKLKDGLLAIA 339 (426)
T ss_dssp CCEEEEE---EHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHH-----------HHHH-TTHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEE---cHHHHhhhccCCcCcCCCCCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 8888877654322 567789999999887773 1111 23445566666666666654
Q ss_pred --CCCceEecCCceeEEecccCC------CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 436 --LEGITCNKAEGAMYLFPRIQL------PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 436 --~~g~~~~~~~gg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
++.+..+.+. |+|+|+++.. |... +...++..+ .++||.+.||..|. ++|||+++
T Consensus 340 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~----------~~~~l~~~l-~~~gi~v~~~~~~~-----~~iRi~~~ 402 (426)
T 1sff_A 340 EKHPEIGDVRGL-GAMIAIELFEDGDHNKPDAK----------LTAEIVARA-RDKGLILLSCGPYY-----NVLRILVP 402 (426)
T ss_dssp HTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCHH----------HHHHHHHHH-HHTTEECEEESTTS-----CEEEECCC
T ss_pred HhCCCeEEEEEE-EEEEEEEEecCccccCCChH----------HHHHHHHHH-HHCCcEEecCCCCC-----CEEEEECC
Confidence 4445555666 4677876631 1110 123444454 46799999987642 38999984
Q ss_pred --CCcCcHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+++++++++++|+++++++
T Consensus 403 ~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 403 LTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 78999999999999998765
No 93
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=4e-33 Score=285.73 Aligned_cols=319 Identities=19% Similarity=0.196 Sum_probs=236.1
Q ss_pred CHHHHHHHHHHHhcCC--C-CCccccCC-CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCC
Q 009517 141 SADSIERAWQILDQIP--G-RATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~--~-~~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~g 215 (533)
|+.+++++.+.+.... + .....|++ ..+..+++++++++++ .++++|++|+|+++++..+++.+ . ++|
T Consensus 29 ~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t~a~~~~~~~~~~-~~g 101 (390)
T 1elu_A 29 PTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN------VDPNTITITDNVTTGCDIVLWGLDW-HQG 101 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT------SCGGGEEEESSHHHHHHHHHHHSCC-CTT
T ss_pred CHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC------CCHHHEEEeCChHHHHHHHHhCCCC-CCC
Confidence 6788998888776521 0 00114554 4678899999999974 56779999999999999999999 6 799
Q ss_pred CeEEEcCCcCcchHHH----HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 216 DGILCPIPQYPLYSAS----IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~----~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
|+|+++.|+|+.+... ++..|++++.++++.+.++.+|++.|++++++ ++++|++++|+||||.+++
T Consensus 102 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~--- 172 (390)
T 1elu_A 102 DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP------KTRLVILSHLLWNTGQVLP--- 172 (390)
T ss_dssp CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT------TEEEEEEESBCTTTCCBCC---
T ss_pred CEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC------CceEEEEeccccCCceecC---
Confidence 9999999999997754 46679999999987434678999999999875 7999999999999999999
Q ss_pred HHHHHHHHH----HcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 292 QRAIVDFCK----KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 292 l~~i~~l~~----~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+++|+++|+ +||+++|+||+|.. +..+ ..+ ... ..+ +++.|+||.+. +|.++||+++
T Consensus 173 ~~~i~~l~~~~~~~~~~~li~Dea~~~----g~~~-~~~----~~~---~~d---~~~~s~~K~~~--~~~g~G~~~~-- 233 (390)
T 1elu_A 173 LAEIMAVCRRHQGNYPVRVLVDGAQSA----GSLP-LDF----SRL---EVD---YYAFTGHKWFA--GPAGVGGLYI-- 233 (390)
T ss_dssp HHHHHHHHHHCCSSSCCEEEEECTTTB----TTBC-CCT----TTS---CCS---EEEEESSSTTC--CCTTCEEEEE--
T ss_pred HHHHHHHHhhhhhhcCcEEEEEccccc----CCcC-CCh----hhc---CCC---EEEcccccccc--CCCceEEEEE--
Confidence 899999999 99999999999974 2111 111 111 233 78999999543 3677999998
Q ss_pred CCHHHHHHHHHhh----------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHH
Q 009517 368 FSAEVREQIYKVA----------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (533)
Q Consensus 368 ~~~~~~~~l~~~~----------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (533)
++++++.+.... . ..++++...+.++..+++. +. ...+++++++++++
T Consensus 234 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-------l~-~~~~~~~~~~~~~~ 304 (390)
T 1elu_A 234 -HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQL-------HQ-RQGTAEERYQAICQ 304 (390)
T ss_dssp -CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHH-------HH-HHCCHHHHHHHHHH
T ss_pred -CHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHH-------HH-HcCCHHHHHHHHHH
Confidence 777776654321 1 2345566777766665531 00 01126778888999
Q ss_pred HHHHHHHHHhcCCCceEec---CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCce
Q 009517 425 RAKTLEDAFNSLEGITCNK---AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWH 501 (533)
Q Consensus 425 ~~~~l~~~L~~~~g~~~~~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~ 501 (533)
+++++.+.|++++|+.++. +.++|+.| +++.. . +...++.. |.++||.+.||. +.++
T Consensus 305 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~-----------~-~~~~~~~~-l~~~gi~v~~~~------~~~~ 364 (390)
T 1elu_A 305 RSEFLWRGLNQLPHVHCLATSAPQAGLVSF-TVDSP-----------L-GHRAIVQK-LEEQRIYLRTIA------DPDC 364 (390)
T ss_dssp HHHHHHHHHHHSTTEEESCSSCCSSSEEEE-EECSS-----------S-CHHHHHHH-HHHTTEECEEET------TTTE
T ss_pred HHHHHHHHHHhcCCcEEecCccccccEEEE-EcCCC-----------C-CHHHHHHH-HHHCCEEEEecC------CCCe
Confidence 9999999999988988874 46887776 45311 1 23444444 467899999975 2249
Q ss_pred EEEEec--CCcCcHHHHHHHHHHH
Q 009517 502 FRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 502 iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
|||++. .+++++++++++|+++
T Consensus 365 iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 365 IRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp EEEECCTTCCHHHHHHHHHHHTTC
T ss_pred EEEecccCCCHHHHHHHHHHHHhh
Confidence 999984 8889999999988753
No 94
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=3.2e-32 Score=283.04 Aligned_cols=326 Identities=13% Similarity=0.150 Sum_probs=241.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcc----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
++.+++++.+++..... ....|....| ..+|+++++++++ . ++++++++|++++..+++++. ++||
T Consensus 80 ~~~v~~a~~~~~~~~~~-~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~sGs~a~~~al~~l~-~~gd 149 (427)
T 2w8t_A 80 DPDVIAAGKEALEKFGS-GTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFSTGYMANLGIISTLA-GKGE 149 (427)
T ss_dssp CHHHHHHHHHHHHHHCS-CCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHS-CTTC
T ss_pred CHHHHHHHHHHHHHhCC-CCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEecCcHHHHHHHHHHhc-CCCC
Confidence 68899999888875221 1223333333 4777888887763 2 356666667789999999988 8999
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
.|+++.|+|..+...+...|++++.++. .|+++|++++++... .++++|++++++||||.+++ +++|+
T Consensus 150 ~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~---l~~l~ 217 (427)
T 2w8t_A 150 YVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAP---LKEMV 217 (427)
T ss_dssp EEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECC---HHHHH
T ss_pred EEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccC---HHHHH
Confidence 9999999999999999999999988873 589999999975210 15889999999999999998 99999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+||+|..+.++.. ...+... .++ .++ .+|++.||||++ |++| ||+++ ++++++.+
T Consensus 218 ~l~~~~g~~li~Dea~~~~~~~~~--g~~~~~~-~~~---~~~-~di~~~s~sK~~-g~~g---G~v~~---~~~l~~~l 283 (427)
T 2w8t_A 218 AVAKKHGAMVLVDEAHSMGFFGPN--GRGVYEA-QGL---EGQ-IDFVVGTFSKSV-GTVG---GFVVS---NHPKFEAV 283 (427)
T ss_dssp HHHHHTTCEEEEECTTTTTTSSTT--SCCHHHH-TTC---TTC-CSEEEEESSSTT-CSCC---EEEEE---CCTTGGGG
T ss_pred HHHHHcCCEEEEECCccccccCCC--CCchHhh-cCC---CcC-CcEEEecchhhh-ccCC---CEEEe---CHHHHHHH
Confidence 999999999999999999877522 1222221 112 222 358899999998 6666 99998 88888777
Q ss_pred HHhh-h--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-cC-CceeEEe
Q 009517 377 YKVA-S--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN-KA-EGAMYLF 451 (533)
Q Consensus 377 ~~~~-~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~-~gg~~~~ 451 (533)
.... . .+.+.++..++++.++|+ ..++.+.++++++++++++.+.|+++ |+.+. .+ .+ .++|
T Consensus 284 ~~~~~~~~~~~~~~~~~~aa~~~al~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~ 350 (427)
T 2w8t_A 284 RLACRPYIFTASLPPSVVATATTSIR-----------KLMTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDS-AIVA 350 (427)
T ss_dssp GGTCHHHHSSCCCCHHHHHHHHHHHH-----------HHTSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCS-SEEE
T ss_pred HHhcccccccCCCCHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCC-CEEE
Confidence 6542 1 334567777777666663 12223667888999999999999988 88887 55 45 4667
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+.++... ....++..++ ++||.+.||..|+.+.+.+++||+++ .++++|++++++|+++++++.
T Consensus 351 ~~~~~~~------------~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~ 416 (427)
T 2w8t_A 351 VMLEDQE------------QAAMMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVG 416 (427)
T ss_dssp EEESSHH------------HHHHHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCHH------------HHHHHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 5554111 1334444544 56999999998876555679999997 599999999999999988764
No 95
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=2.6e-32 Score=281.16 Aligned_cols=328 Identities=14% Similarity=0.112 Sum_probs=239.2
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc-cCCCC
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-RSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~~gd 216 (533)
++.+++++.+++.+.... ....|+...+..++|+++|++++ . +++|++++|++ ++..++..+. ..+||
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG~~-a~~~~~~~l~~~~~gd 133 (401)
T 2bwn_A 62 HPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSSAYN-ANDATLSTLRVLFPGL 133 (401)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESCHHH-HHHHHHHHHHHHSTTC
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECCcHH-HHHHHHHHHhcCCCCC
Confidence 568899988888652210 12346667788999999999974 2 47788887776 7777776653 14899
Q ss_pred eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+|+++.|+|+.+...++..|++++.++.+ |++++++.++... .+++++|++++|+||||.+++ +++|+
T Consensus 134 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~--~~~~~~v~~~~~~nptG~~~~---l~~i~ 201 (401)
T 2bwn_A 134 IIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADD--PAAPKLIAFESVYSMDGDFGP---IKEIC 201 (401)
T ss_dssp EEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSC--TTSCEEEEEESBCTTTCCBCC---HHHHH
T ss_pred EEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhc--cCCceEEEEecCcCCCCCcCC---HHHHH
Confidence 99999999999999999999999999864 7899999887420 026899999999999999999 89999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+||+|....|+.. ...+.. ..++ .+..++++.||||++ |++| ||+++ ++++++.+
T Consensus 202 ~l~~~~~~~li~Dea~~~g~~~~~--g~~~~~-~~~~----~~~~~i~~~s~sK~~-~~~G---G~~~~---~~~~~~~l 267 (401)
T 2bwn_A 202 DIAEEFGALTYIDEVHAVGMYGPR--GAGVAE-RDGL----MHRIDIFNGTLAKAY-GVFG---GYIAA---SARMVDAV 267 (401)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSTT--SCCHHH-HHTC----GGGCSEEEEESSSTT-CSCC---EEEEE---CHHHHHHH
T ss_pred HHHHHcCCEEEEeccccccccCCC--Cceeee-ccCc----cccCcEEEeechhhc-cCCC---CEEec---CHHHHHHH
Confidence 999999999999999996555322 112221 1111 111248899999999 6677 99998 89998887
Q ss_pred HHhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEe
Q 009517 377 YKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLF 451 (533)
Q Consensus 377 ~~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~ 451 (533)
..... ...+.+++.+.++.++++ +.++ +++++++++++++++.+.|+++ |+.++.+.++ ++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~a~~~al~-----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~ 334 (401)
T 2bwn_A 268 RSYAPGFIFSTSLPPAIAAGAQASIA-----------FLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDHGSH-IVP 334 (401)
T ss_dssp HHHCHHHHTSBCCCHHHHHHHHHHHH-----------HHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSS-CEE
T ss_pred HHhCcCceecCCCCHHHHHHHHHHHH-----------HHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCC-eEE
Confidence 65432 223345577777666663 1111 3567788899999999999988 8888888777 566
Q ss_pred cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 452 PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+.++ .+. +...++..+++++||.+.|+..|+.+.+.+++||+++ .+++++++++++|+++++++
T Consensus 335 ~~~~--~~~----------~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 335 VVIG--DPV----------HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp EECC--CHH----------HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred EEeC--ChH----------HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 5443 211 1234455555678999999988875445569999997 68899999999999887653
No 96
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=1.2e-31 Score=277.01 Aligned_cols=321 Identities=12% Similarity=0.044 Sum_probs=234.5
Q ss_pred CHHHHHHHHHHHhcCCC---CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
++.+++++.+++.+... .....|+......+|+++++++++ . +..+++++|++++..++++++ ++||.
T Consensus 75 ~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~--~~~i~~~sGt~a~~~~l~~~~-~~gd~ 145 (409)
T 3kki_A 75 HPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG------F--DECLLSQSGWNANVGLLQTIC-QPNTN 145 (409)
T ss_dssp CHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHC-CTTCE
T ss_pred CHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC------C--CeEEEecchHHHHHHHHHHhc-CCCCE
Confidence 68999999998876321 011223333446678888888764 2 234555666799999999998 89999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|..+...+...|++++.++. .|+++|++++++. ++++|++++|+||||.+++ +++|++
T Consensus 146 Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~-----~~~~vi~~~~~nptG~~~~---l~~l~~ 210 (409)
T 3kki_A 146 VYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRH-----GPGIIVVDSIYSTLGTIAP---LAELVN 210 (409)
T ss_dssp EEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHH-----CSCEEEEESBCTTTCCBCC---HHHHHH
T ss_pred EEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhc-----CCeEEEECCCCCCCCCcCC---HHHHHH
Confidence 999999999999999999999988764 5899999999874 5799999999999999999 999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||++||+||+|.++.++... ..+... .++ .++ ..|++.||||++ +++ .||+++ ++++++.+.
T Consensus 211 la~~~~~~li~De~~~~g~~g~~g--~~~~~~-~~~---~~~-~di~~~s~sK~~-~~~---gg~v~~---~~~~~~~~~ 276 (409)
T 3kki_A 211 ISKEFGCALLVDESHSLGTHGPNG--AGLLAE-LGL---TRE-VHFMTASLAKTF-AYR---AGAIWC---NNEVNRCVP 276 (409)
T ss_dssp HHHHHTCEEEEECTTTTTTSSGGG--CCHHHH-HTC---GGG-CSEEEEESSSTT-CSS---CEEEEE---SSSGGGTHH
T ss_pred HHHHcCCEEEEECCccccccCCCC--Ccchhh-cCC---CCC-CCEEEeecchhh-CCC---ceEEEE---CHHHHHHHH
Confidence 999999999999999986553211 111111 111 111 237899999999 544 499988 888887776
Q ss_pred Hhhh---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEeccc
Q 009517 378 KVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 454 (533)
Q Consensus 378 ~~~~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~ 454 (533)
.... .+...++..++++.++++ ..++.+.++++++++++++.+.|+++ |+.+. + ++.++|+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~aa~~aal~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~-~~~~~~~~~ 342 (409)
T 3kki_A 277 FISYPAIFSSTLLPYEAAGLETTLE-----------IIESADNRRQHLDRMARKLRIGLSQL-GLTIR-S-ESQIIGLET 342 (409)
T ss_dssp HHCHHHHHSBCCCHHHHHHHHHHHH-----------HHHHCHHHHHHHHHHHHHHHHHHHTT-TCCCC-C-SSSEEEEEE
T ss_pred HhCcCccccCCCcHHHHHHHHHHHH-----------HHhcCHHHHHHHHHHHHHHHHHHHHc-CCccC-C-CCCEEEEEe
Confidence 5432 223456666666666663 22333577888999999999999998 77755 3 556677655
Q ss_pred CCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 455 QLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
+.+. +...++..++ ++||.+.|+..+....+.+++||++. .++++|++++++|+++++.
T Consensus 343 ~~~~------------~~~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 343 GDER------------NTEKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp ESHH------------HHHHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHH------------HHHHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 4221 1234454554 56999998665544456679999996 6889999999999998875
No 97
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=1.8e-32 Score=285.23 Aligned_cols=348 Identities=14% Similarity=0.082 Sum_probs=217.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-------C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------S 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------~ 213 (533)
|+++++++.+++.+. ..|.+..+..++++++++++.+.++ .+.++|++|+|+++|+..+++.++. .
T Consensus 47 ~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 119 (430)
T 3i4j_A 47 RAEVGERMAAQAARL-----PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEATESAVKLARQYHVERGEP 119 (430)
T ss_dssp CHHHHHHHHHHHHHC-----CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc-----ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999988762 3344445566777888888877766 5567999999999999999998862 1
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCCe---------------EEEEecCCCC-CCCCCHHHHHHHHHHHHhcC-CCeeEEEE
Q 009517 214 ENDGILCPIPQYPLYSASIALHGGT---------------LVPYYLDEAT-GWGLETSEVKKQLEAAKAKG-ITVRALVV 276 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~~---------------~~~v~~~~~~-~~~ld~~~l~~~i~~~~~~g-~~~~~iil 276 (533)
++++|++.+|+|+++...+...+.. +..++..... ....|+++|+++++.. + .++++|++
T Consensus 120 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---~~~~~~~vi~ 196 (430)
T 3i4j_A 120 GRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLERE---GPETVAAFMA 196 (430)
T ss_dssp TCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHH---CGGGEEEEEE
T ss_pred CCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhc---CCCCEEEEEE
Confidence 3689999999999988765555432 1122221100 0113568999999753 1 15666665
Q ss_pred eCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCC
Q 009517 277 INPGN-PTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYG 354 (533)
Q Consensus 277 ~~p~N-PtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~g 354 (533)
+.++| ++|. +++++++++|+++|++||+++|+||+|.+|.+.|. ..++..+ +++ .++ +.+|||++ +
T Consensus 197 ~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~--~~~~~~~-~~~---~~d-----i~t~sK~l-~ 264 (430)
T 3i4j_A 197 EPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS--PLALSRW-SGV---TPD-----IAVLGKGL-A 264 (430)
T ss_dssp CSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGT-TTC---CCS-----EEEECGGG-T
T ss_pred cCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc--hhhhhhh-cCC---CCc-----EEEEcccc-c
Confidence 55577 8887 77888899999999999999999999999876553 2221111 022 355 44799999 5
Q ss_pred CCC-CeeEEEEEecCCHHHHHHHHHh-----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 009517 355 ECG-KRGGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428 (533)
Q Consensus 355 l~G-~riG~v~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (533)
.| +|+||+++ ++++++.+.+. ...++++++++|+++.++|+... ..+..+++++..+..++.
T Consensus 265 -~G~~r~G~~~~---~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--------~~~~~~~~~~~~~~~~~~ 332 (430)
T 3i4j_A 265 -AGYAPLAGLLA---APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVE--------REDLTGAAKERGAQLLAG 332 (430)
T ss_dssp -TTSSCCEEEEE---CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHH--------HTTHHHHHHHHHHHHHHH
T ss_pred -CCccccEEEEE---CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHH--------cccHHHHHHHHHHHHHHH
Confidence 49 99999998 99999999873 33678899999999988874110 011122333333333444
Q ss_pred HHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 429 LEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 429 l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
|.+.+.++|++..+++.|.|+.+ .+.... .... .........++.. |.++||.+.|+..+....+.+++||+++
T Consensus 333 l~~~~~~~~~~~~~~~~g~~~~~-~~~~~~--~~~~-~~~~~~~~~~~~~-l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~ 407 (430)
T 3i4j_A 333 LQALQARFPQMMQVRGTGLLLGV-VLGDLA--TGQA-FETPGIASRIGAA-ALKRGLITYPGSGAEPNGRGDHLLLGPPL 407 (430)
T ss_dssp HHHHHHHCTTEEEEEEETTEEEE-EEC---------------CHHHHHHH-HHHTTEECC-----------CEEEECCCT
T ss_pred HHHHHHhCCCeEEEEEEEEEEEE-Eecccc--ccCC-CccHHHHHHHHHH-HHhCCCEEEecccccCCCCCCEEEEECCC
Confidence 44444456778888888775543 332110 0000 0000012334444 4578999999843332334558999996
Q ss_pred -CCcCcHHHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+++++++++++|+++++++
T Consensus 408 ~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 408 SITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 78899999999999998865
No 98
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=2.1e-32 Score=280.82 Aligned_cols=320 Identities=10% Similarity=0.040 Sum_probs=235.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccC--CCcccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccCCCC
Q 009517 140 FSADSIERAWQILDQIPGRATGAYS--HSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
+|+.+++++.+.+.. .|. +..+..+++++++++++ .+++ +|++|+|+++|+..+++.++ ++||
T Consensus 30 ~~~~v~~a~~~~~~~-------~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~t~a~~~~~~~~~-~~gd 95 (393)
T 2huf_A 30 APQRVLDAMSRPILG-------HLHPETLKIMDDIKEGVRYLFQ------TNNIATFCLSASGHGGMEATLCNLL-EDGD 95 (393)
T ss_dssp CCHHHHHHTTSCCCC-------TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCHHHHHHHHHHHHC-CTTC
T ss_pred CCHHHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcHHHHHHHHHHHHh-CCCC
Confidence 378888776554432 232 23457788888888874 4454 89999999999999999998 7999
Q ss_pred eEEEcCCcCcchH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 217 GILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 217 ~Vlv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
+|++++|+|+++. ..++..|.+++.+++++ ++.+|++++++++++. ++++|++++|+||||.+++ +++
T Consensus 96 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~ 165 (393)
T 2huf_A 96 VILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQG---LEG 165 (393)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTT
T ss_pred EEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCC---HHH
Confidence 9999999998843 34566899999999875 3578999999999864 6899999999999999999 899
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
|+++|++||+++|+||++.. +..+ ..+ ..+ .. .+++.|+||+++|++|+ ||+++ ++++++
T Consensus 166 i~~~~~~~~~~li~D~a~~~----~~~~-~~~----~~~---~~---d~~~~s~sK~l~g~~G~--G~~~~---~~~~~~ 225 (393)
T 2huf_A 166 VGALCHQHNCLLIVDTVASL----GGAP-MFM----DRW---EI---DAMYTGSQKVLGAPPGI--TPVSF---SHRAVE 225 (393)
T ss_dssp HHHHHHHTTCEEEEECTTTB----TTBC-CCT----TTT---TC---SEEECCSSSTTCCCSSC--EEEEE---CHHHHH
T ss_pred HHHHHHHcCCEEEEEccccc----CCCC-cch----hhc---Cc---cEEEECCCcccccCCCe--EEEEE---CHHHHH
Confidence 99999999999999999763 2111 111 111 12 37789999987577787 99998 899998
Q ss_pred HHHHhh----h--------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHHHHHHH
Q 009517 375 QIYKVA----S--------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLARRAKTL 429 (533)
Q Consensus 375 ~l~~~~----~--------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 429 (533)
.+.+.. . ...+++..++.++.++++ ...+ .+++++++++++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~l 295 (393)
T 2huf_A 226 RYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIA----------MACEEGLPALIARHEDCAKRL 295 (393)
T ss_dssp HHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHH----------HHHHhCHHHHHHHHHHHHHHH
Confidence 887541 0 012445666666655653 1112 2567788899999999
Q ss_pred HHHHhcCCCceEecCC---ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 430 EDAFNSLEGITCNKAE---GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 430 ~~~L~~~~g~~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
.+.|+++ |+.+..+. +++++++.++ .+ . +...++..+++++||.+.||..|.. .+++||++
T Consensus 296 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~---------~-~~~~~~~~L~~~~gi~v~~g~~~~~---~~~~Ri~~ 359 (393)
T 2huf_A 296 YRGLQDA-GFELYADPKDRLSTVTTIKVP--QG---------V-DWLKAAQYAMKTYLVEISGGLGPTA---GQVFRIGL 359 (393)
T ss_dssp HHHHHHT-TCCBSSCGGGBCTTEEEEECC--TT---------C-CHHHHHHHHHHHHCEECBCCCGGGT---TTEEEEEC
T ss_pred HHHHHHc-CCeeccCccccCCcEEEEEcC--CC---------C-CHHHHHHHHHHhCCEEEecCccccc---CCEEEEEc
Confidence 9999998 88877663 3445665443 11 1 2345555666667999999987642 23999999
Q ss_pred -c--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 507 -L--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 507 -~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+ .+++++++++++|+++++++..
T Consensus 360 ~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 360 MGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred ccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 6 3677899999999999987643
No 99
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=2.5e-33 Score=285.42 Aligned_cols=320 Identities=12% Similarity=0.074 Sum_probs=233.0
Q ss_pred CHHHHHHHHHHHhcCCC-----CCccccCCCcccHHHHHH-HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC
Q 009517 141 SADSIERAWQILDQIPG-----RATGAYSHSQGIKGLRDT-IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~-----~~~~~Y~~~~G~~~lr~a-ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 214 (533)
|+.+++++.+.+..... .....|.+..+..+++++ ++++++ .+ +|++|+|+++|+..+++.++ ++
T Consensus 22 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~~~~g~t~a~~~~~~~~~-~~ 92 (371)
T 2e7j_A 22 TEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VARVTNGAREAKFAVMHSLA-KK 92 (371)
T ss_dssp CHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEEEESSHHHHHHHHHHHHC-CT
T ss_pred CHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEEEeCChHHHHHHHHHHHh-CC
Confidence 78889888887764210 012345567789999999 999974 22 89999999999999999998 79
Q ss_pred CCeEEEcCCcCcchHHHHHHhCCeEEEEe--cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 215 NDGILCPIPQYPLYSASIALHGGTLVPYY--LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~--~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
||+|++++|+|+++...++..|++++.++ .++ ++.+|+++|++++++.... +++++|++++|+||||.+++ +
T Consensus 93 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~---~ 166 (371)
T 2e7j_A 93 DAWVVMDENCHYSSYVAAERAGLNIALVPKTDYP--DYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPD---V 166 (371)
T ss_dssp TCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCC---H
T ss_pred CCEEEEccCcchHHHHHHHHcCCeEEEeecccCC--CCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCC---H
Confidence 99999999999999999999999999999 653 5789999999999853111 37899999999999999999 7
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
++|+++|++||+++|+||+|..+.+. .++.. + ..+ +++.|+||++ +. |.|+||+++ ++++
T Consensus 167 ~~i~~~~~~~~~~li~D~a~~~~~~~-----~~~~~----~---~~d---i~~~s~sK~~-~~-~~~~G~~~~---~~~~ 226 (371)
T 2e7j_A 167 KKIAKVCSEYDVPLLVNGAYAIGRMP-----VSLKE----I---GAD---FIVGSGHKSM-AA-SGPIGVMGM---KEEW 226 (371)
T ss_dssp HHHHHHHHTTTCCEEEECTTTBTTBC-----CCHHH----H---TCS---EEEEEHHHHS-SC-CSSCEEEEE---CTTT
T ss_pred HHHHHHHHHcCCeEEEECccccCCCC-----CChhh----c---CCC---EEEecCCcCC-CC-CCCcEEEEE---echh
Confidence 99999999999999999999874431 22222 2 244 7899999998 43 469999998 7777
Q ss_pred HHH-HHHhhh---c-----cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCCceE
Q 009517 373 REQ-IYKVAS---V-----NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL--ARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 373 ~~~-l~~~~~---~-----~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~g~~~ 441 (533)
++. +..... . .+++++..+.++..+++ +... .+.+++ +++++++.+.|+++ |+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~-----------~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~ 292 (371)
T 2e7j_A 227 AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFP-----------HVRE--RIKRWDEEVEKARRFAAEMEKL-GIKQ 292 (371)
T ss_dssp TTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHH-----------HHHH--HGGGHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred hhhhccccccCcccccccccCCcCHHHHHHHHHHHH-----------HHHH--HHHHHHHHHHHHHHHHHHHHHc-CcEE
Confidence 666 554332 1 34456666666655552 1121 456667 88889999999998 9988
Q ss_pred ecCC--ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC---CCCCceEE-EEec---CCcCc
Q 009517 442 NKAE--GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ---VPGTWHFR-CTIL---PQEDK 512 (533)
Q Consensus 442 ~~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---~~g~~~iR-is~~---~~~e~ 512 (533)
..+. .+.++|++++ . ...+. +.|.++||.+.| ..|.. ....++|| |+++ .++++
T Consensus 293 ~~~~~~~~~~~~~~~~--~-------------~~~~~-~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~ 355 (371)
T 2e7j_A 293 LGDNPHNHDLMFFHAE--V-------------LYEIS-KKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEE 355 (371)
T ss_dssp ESSSSCCSSEEEEECH--H-------------HHHHH-HHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHH
T ss_pred ecCCCccCceEEEECC--C-------------HHHHH-HHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHH
Confidence 8763 2346775543 1 23333 445588999988 44421 11134899 9997 68999
Q ss_pred HHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKN 526 (533)
Q Consensus 513 i~~~~~~l~~~l~~ 526 (533)
+++++++|++++++
T Consensus 356 i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 356 VDYVLNAFKEIIEK 369 (371)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998865
No 100
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=2.1e-31 Score=279.17 Aligned_cols=375 Identities=14% Similarity=0.099 Sum_probs=257.4
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCC--cCCCCCCchHHHHHHhhcCCCCCCCcccccCCCC
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNP--QSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p--~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p 141 (533)
++..+.++.+..+..++.++...|.+ +++++.|.+ ++ ..+.++..++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~l~~~~~ylD~----------------------~~~~~~~~~~ 57 (456)
T 2ez2_A 9 RIKSVETVSMIPRDERLKKMQEAGYN---------TFLLNSKDIYIDL----------------------LTDSGTNAMS 57 (456)
T ss_dssp CCCCCCCCCCCCHHHHHHHHHHTTTC---------GGGSCGGGCSEEC----------------------SCSSSCCCCC
T ss_pred eeeeecccCCCCHHHHHHHHHHCCCC---------cccCCcccceeee----------------------ccccCCccCC
Confidence 45567777777788888888887776 889998887 32 2222222335
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEc
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~ 221 (533)
+.+++++. . ....|.+..|..+||++++++++ .+++++|+|+++|+..+++.++ ++|| +++
T Consensus 58 ~~~~~a~~----~----~~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~-~~gd--i~~ 118 (456)
T 2ez2_A 58 DKQWAGMM----M----GDEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAI-KPGQ--YVA 118 (456)
T ss_dssp HHHHHHHT----T----CCCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHC-CTTC--EEE
T ss_pred HHHHHHhh----c----chhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhC-CCCC--Eec
Confidence 55555543 2 13468888889999999999984 3479999999999999999997 8999 788
Q ss_pred CCcC-cchHHHHHHhCCeEEEEecCCC----C----CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC-CCccCCCHHH
Q 009517 222 IPQY-PLYSASIALHGGTLVPYYLDEA----T----GWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEEN 291 (533)
Q Consensus 222 ~p~~-~~~~~~~~~~g~~~~~v~~~~~----~----~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N-PtG~~~s~~~ 291 (533)
.|+| ..+...+...|++++.+++++. . +|.+|+++|++++++.. ...+++|++++|+| |||.+++.++
T Consensus 119 ~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t--~~~~~~v~l~~p~n~ptG~~~~~~~ 196 (456)
T 2ez2_A 119 GNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG--AENIAYICLAVTVNLAGGQPVSMAN 196 (456)
T ss_dssp ESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred cccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhcc--ccceeEEEEeccCCCCCCccCCHHH
Confidence 9999 7778889999999999988732 1 36899999999998730 01248999999998 9999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccccc----------ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQE----------NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG 361 (533)
+++|+++|++||+++|+||+|.. +.|.+. ++..+...++. ..| ++++ |++|.+ + +| ++|
T Consensus 197 l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~----~~~~~~~~~~~-~~d--~~~~-S~kk~~-~-~~-~gG 265 (456)
T 2ez2_A 197 MRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENK----SIAEIVHEMFS-YAD--GCTM-SGKKDC-L-VN-IGG 265 (456)
T ss_dssp HHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTS----CHHHHHHHHHT-TCS--EEEE-ETTTTT-C-CS-SCE
T ss_pred HHHHHHHHHHcCCeEEEEccccccccccccccccccCCc----chhhhhhhhcc-cCC--EEEE-eCcccC-C-CC-cee
Confidence 99999999999999999999986 445442 11111101000 234 3444 778854 4 67 789
Q ss_pred EEEEecCCHHHHHHHHHhhhc------cccCChHHHHH-HHHHcCCCCCCChhHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 009517 362 YMEVTGFSAEVREQIYKVASV------NLCSNISGQIL-ASLVMSPPKVGDESYESYCAER-DGILSSLARRAKTLEDAF 433 (533)
Q Consensus 362 ~v~~~~~~~~~~~~l~~~~~~------~~~~~~~~q~a-~~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L 433 (533)
|+++ .++++++.+...... ..+.+.....+ +...+ +.+ +...++.+++.+++.+.|
T Consensus 266 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~--------------~~~~~~~~~~~~~~~~~l~~~L 329 (456)
T 2ez2_A 266 FLCM--NDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLR--------------EAMQYEYIEHRVKQVRYLGDKL 329 (456)
T ss_dssp EEEE--SCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHH--------------HHTCHHHHHHHHHHHHHHHHHH
T ss_pred EEEE--CCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHH--------------HHhHHHHHHHHHHHHHHHHHHH
Confidence 9986 257888887665431 11223232222 22222 111 233344455567788888
Q ss_pred hcCCCceEecCCceeEEecccCC-CHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEc-CCCCC-------C--CCC
Q 009517 434 NSLEGITCNKAEGAMYLFPRIQL-PEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVP-GSGFG-------Q--VPG 498 (533)
Q Consensus 434 ~~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~p-g~~f~-------~--~~g 498 (533)
++. |+.++.|.+++++|+++.. +. +.+. ...++..+++++||.+.+ |..|. . ..+
T Consensus 330 ~~~-g~~~~~p~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~ 399 (456)
T 2ez2_A 330 KAA-GVPIVEPVGGHAVFLDARRFCE---------HLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPK 399 (456)
T ss_dssp HHT-TCCBCSSCCSSEEEEEHHHHTT---------TSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCS
T ss_pred hcC-CCccccCCCceEEEEEhHHhcC---------CCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCC
Confidence 876 8888888889999976530 00 0111 112244555788999876 54331 0 122
Q ss_pred CceEEEEec---CCcCcHHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTIL---PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 499 ~~~iRis~~---~~~e~i~~~~~~l~~~l~~~ 527 (533)
.++|||++. .++++|++++++|++++++.
T Consensus 400 ~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~ 431 (456)
T 2ez2_A 400 LETVRLTIPRRVYTYAHMDVVADGIIKLYQHK 431 (456)
T ss_dssp CCEEEEECCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 358999997 68999999999999988764
No 101
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=9.6e-32 Score=275.87 Aligned_cols=321 Identities=14% Similarity=0.064 Sum_probs=233.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+.+.. ...|....+..++|++++++++ .++++|++|+|+++++..+++.++ ++||+|++
T Consensus 21 ~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~t~g~t~a~~~~~~~~~-~~gd~Vl~ 88 (392)
T 2z9v_A 21 YPEVLRGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMR------LSNKPVILHGEPVLGLEAAAASLI-SPDDVVLN 88 (392)
T ss_dssp CHHHHHHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTT------CSSCCEEESSCTHHHHHHHHHHHC-CTTCCEEE
T ss_pred CHHHHHHHhccccc-----cccHHHHHHHHHHHHHHHHHhC------CCCCEEEEeCCchHHHHHHHHHhc-CCCCEEEE
Confidence 78888777655432 1122333456788888888864 457899999999999999999997 79999999
Q ss_pred cCCcCcch--HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 009517 221 PIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (533)
Q Consensus 221 ~~p~~~~~--~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l 298 (533)
+.|+|+++ ...++..|.+++.++++++ +.+|+++|++++++ .+++++|++++|+||||.+++ +++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l 159 (392)
T 2z9v_A 89 LASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKA----HPEITVVSVCHHDTPSGTINP---IDAIGAL 159 (392)
T ss_dssp EESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHH----CTTCCEEEEESEEGGGTEECC---HHHHHHH
T ss_pred ecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhc----CCCCcEEEEeccCCCCceecc---HHHHHHH
Confidence 99999875 3445567999999998753 46899999999964 126899999999999999998 8899999
Q ss_pred HHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH
Q 009517 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (533)
Q Consensus 299 ~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~ 378 (533)
|++||+++|+||+|.. +..+ .++ ..+ ..+ +++.|+||++.|++|+ ||+++ ++++++.+..
T Consensus 160 ~~~~~~~li~D~a~~~----g~~~-~~~----~~~---~~d---~~~~s~sK~~~~~~g~--G~l~~---~~~~~~~l~~ 219 (392)
T 2z9v_A 160 VSAHGAYLIVDAVSSF----GGMK-THP----EDC---KAD---IYVTGPNKCLGAPPGL--TMMGV---SERAWAKMKA 219 (392)
T ss_dssp HHHTTCEEEEECTTTB----TTBS-CCG----GGG---TCS---EEEECSSSTTCCCSCC--EEEEE---CHHHHHHHHT
T ss_pred HHHcCCeEEEEccccc----CCcc-ccc----ccc---cce---EEEecCcccccCCCce--eEEEE---CHHHHHHhhh
Confidence 9999999999999973 2211 111 112 233 7789999977555554 99998 8898888764
Q ss_pred hh--------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Q 009517 379 VA--------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAE-RDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 379 ~~--------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
.. . ..++++...+.++..+++ .+.++ +++++++++++++++.+.|+++
T Consensus 220 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 289 (392)
T 2z9v_A 220 NPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALD----------LYLNEGPEAVWARHALTAKAMRAGVTAM 289 (392)
T ss_dssp CTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHH----------HHHhccHHHHHHHHHHHHHHHHHHHHHc
Confidence 21 1 223455666666555553 12233 5678888999999999999988
Q ss_pred CCceEecCC----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c--CC
Q 009517 437 EGITCNKAE----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L--PQ 509 (533)
Q Consensus 437 ~g~~~~~~~----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~--~~ 509 (533)
|+.+..|. .+.++|+.++ .+ . +...++..+++++||.+.||..+. +.+++||++ + .+
T Consensus 290 -g~~~~~~~~~~~~~~~~~~~~~--~~---------~-~~~~l~~~L~~~~gi~v~~g~~~~---~~~~lRi~~~~~~~~ 353 (392)
T 2z9v_A 290 -GLSVWAASDSIASPTTTAVRTP--DG---------V-DEKALRQAARARYGVVFSSGRGET---LGKLTRIGHMGPTAQ 353 (392)
T ss_dssp -TCCBSSSSGGGBCTTEEEEECC--TT---------C-CHHHHHHHHHHHHCEECEECCGGG---TTTEEEEECCGGGCS
T ss_pred -CCeeccCCccccCCceEEEECC--CC---------C-CHHHHHHHHHhcCCEEEecCCCCC---CCCeEEEeCcccccC
Confidence 88877633 3455665442 11 1 234455555544599999988654 233899995 4 78
Q ss_pred cCcHHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~~ 528 (533)
++++++++++|+++++++.
T Consensus 354 ~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 354 PIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999999987653
No 102
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=2.7e-32 Score=280.34 Aligned_cols=325 Identities=10% Similarity=0.053 Sum_probs=239.5
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCCC--cccHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHhccC
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSHS--QGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~--~G~~~lr~aia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~ 213 (533)
|..+++.+++++.+.+. ..|.+. ....++|++++++++ .+++ +|++|+|+++++..+++.++ +
T Consensus 26 p~~~~~~v~~a~~~~~~-------~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~-~ 91 (396)
T 2ch1_A 26 PSNCSKRVLTAMTNTVL-------SNFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLL-E 91 (396)
T ss_dssp SCCCCHHHHHHTTSCCC-------CTTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHC-C
T ss_pred CCCCCHHHHHHhccccc-------cCCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhc-C
Confidence 45557777776644332 124332 237889999999985 4566 89999999999999999998 8
Q ss_pred CCCeEEEcCCcCcchH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 214 ENDGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
+||+|++++|+|+.+. ..++..|++++.++++. ++.+|++++++++++. ++++|++++|+||||.+++
T Consensus 92 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~--- 161 (396)
T 2ch1_A 92 EGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELH-----QPKCLFLTHGDSSSGLLQP--- 161 (396)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---
T ss_pred CCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhC-----CCCEEEEECCCCCCceecC---
Confidence 9999999999999985 47788899999999864 5679999999999874 6899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
+++|+++|+++|+++|+||+|.. +..+ .++ ..+ ..+ +++.|++|.+.++ .++||+++ +++
T Consensus 162 ~~~i~~l~~~~~~~li~Dea~~~----g~~~-~~~----~~~---~~d---~~~~s~~K~~~~~--~g~g~~~~---~~~ 221 (396)
T 2ch1_A 162 LEGVGQICHQHDCLLIVDAVASL----CGVP-FYM----DKW---EID---AVYTGAQKVLGAP--PGITPISI---SPK 221 (396)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTB----TTBC-CCT----TTT---TCC---EEECCCC-CCCCC--SSCEEEEE---CHH
T ss_pred HHHHHHHHHHcCCEEEEEccccc----cCCc-cch----hhc---CcC---EEEEcCCccccCC--CCeEEEEE---CHH
Confidence 89999999999999999999982 2211 111 111 223 5678999987543 45599988 888
Q ss_pred HHHHHHHhh-----------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 009517 372 VREQIYKVA-----------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (533)
Q Consensus 372 ~~~~l~~~~-----------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (533)
+++.+.... . ..++++..++.++.++|+. + ..+.+++++++++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-------~--~~~~~~~~~~~~~~~~~ 292 (396)
T 2ch1_A 222 ALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQ-------I--AEEGLENQIKRRIECAQ 292 (396)
T ss_dssp HHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHH-------H--HHHCHHHHHHHHHHHHH
T ss_pred HHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHH-------H--HHhhHHHHHHHHHHHHH
Confidence 887775310 1 2244677778777777631 0 11235678888999999
Q ss_pred HHHHHHhcCCCceEecCCce----eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEE
Q 009517 428 TLEDAFNSLEGITCNKAEGA----MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFR 503 (533)
Q Consensus 428 ~l~~~L~~~~g~~~~~~~gg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iR 503 (533)
++.+.|+++ |+.++.+.++ .++++.++ .+ . +...++..+++++||.+.+|..+. +.++||
T Consensus 293 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--~~---------~-~~~~~~~~L~~~~gi~v~~g~~~~---~~~~iR 356 (396)
T 2ch1_A 293 ILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIP--KG---------V-DWWKVSQYAMNNFSLEVQGGLGPT---FGKAWR 356 (396)
T ss_dssp HHHHHHHHH-TCCBSSCSGGGBCTTEEEEECC--TT---------C-CHHHHHHHHHHHHCBCCBCCCGGG---TTTEEE
T ss_pred HHHHHHHHC-CCeeccCCccccCCceEEEEcC--CC---------C-CHHHHHHHHHHhCCEEEecCcccc---CCCEEE
Confidence 999999998 8888777653 25554442 11 1 244555566666799999987553 233899
Q ss_pred EEe-c--CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 504 CTI-L--PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 504 is~-~--~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
|++ . .+++++++++++|+++++++...
T Consensus 357 i~~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 386 (396)
T 2ch1_A 357 VGIMGECSTVQKIQFYLYGFKESLKATHPD 386 (396)
T ss_dssp EECCGGGCSHHHHHHHHHHHHHHHHHHCTT
T ss_pred EECCCCcCCHHHHHHHHHHHHHHHHHhCcc
Confidence 999 4 47888999999999999887543
No 103
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-31 Score=271.06 Aligned_cols=324 Identities=13% Similarity=0.092 Sum_probs=234.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+.+++++.+++. .|.+..|..++++++++++.+.+| .++++|++|+|+++++..+++.++ ++||+|++
T Consensus 27 ~~~v~~a~~~~~~--------~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~vl~ 95 (359)
T 1svv_A 27 HPKILDLMARDNM--------TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTNLIACSLAL-RPWEAVIA 95 (359)
T ss_dssp CHHHHHHHHHHTT--------CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHHHHHHHHHC-CTTEEEEE
T ss_pred CHHHHHHHHHHHh--------hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHHHHHHHHHh-CCCCEEEE
Confidence 6888888887764 256666778899999999988888 567899999999999999999998 79999999
Q ss_pred cCCcCcchHH--HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH-HhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 221 PIPQYPLYSA--SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA-KAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 221 ~~p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~-~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
++|+|+.+.. .++..|.+++.++.+ ++.+|+++|++.+++. ...+.++++|++++| ||||.+++.+++++|++
T Consensus 96 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~ 171 (359)
T 1svv_A 96 TQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISA 171 (359)
T ss_dssp ETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHH
T ss_pred cccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHH
Confidence 9999999887 478889999999975 5789999999999872 011223899999999 79999999999999999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~ 377 (533)
+|++||+++|+||+|.++.+...........+ .. ..+ +++.|++|.. + ...+|++++ ++++++.+.
T Consensus 172 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~----~~d---~~~~s~~K~g-~--~~~~g~l~~---~~~~~~~~~ 237 (359)
T 1svv_A 172 SCKEHGLYLFLDGARLASALSSPVNDLTLADI-AR----LTD---MFYIGATKAG-G--MFGEALIIL---NDALKPNAR 237 (359)
T ss_dssp HHHHHTCEEEEECTTHHHHHTSTTCCCCHHHH-HH----HCS---EEEEECTTTT-C--SSCEEEEEC---SGGGCTTHH
T ss_pred HHHHhCCEEEEEccchhhhhcCCCcchhhhhh-hh----cCC---EEEEecccCC-C--CCceEEEEE---cccHHHHHH
Confidence 99999999999999966433211111111111 01 134 6678899963 3 356799987 888877776
Q ss_pred Hhh--h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEeccc
Q 009517 378 KVA--S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRI 454 (533)
Q Consensus 378 ~~~--~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~ 454 (533)
... . ..+..+.....++..++.. ...++++++++++++++.+.| +.+|+.++.+.+++|+|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~------------~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~ 304 (359)
T 1svv_A 238 HLIKQRGALMAKGWLLGIQFEVLMKD------------NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPIL 304 (359)
T ss_dssp HHHHHTTCCCTTTHHHHHHHHHHTST------------THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEE
T ss_pred HHHhcCCcccccchhhHHHHHHHHhh------------hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEc
Confidence 542 1 2122222222333345542 113557778889999999999 45689888888999999654
Q ss_pred CCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 455 QLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+ ..++..+++++||.+.+.. ..+.++|||++. .+++++++++++|+++++++
T Consensus 305 ~-----------------~~~~~~l~~~~gi~v~~~~----~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 305 E-----------------NTMIAELNNDFDMYTVEPL----KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp E-----------------HHHHHHHTTTEECEEEEEE----TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred C-----------------HHHHHHHHHhcCEEEEecc----cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 3 1234455544499983210 124459999885 78899999999999887654
No 104
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-31 Score=276.46 Aligned_cols=328 Identities=13% Similarity=0.072 Sum_probs=233.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccC----CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh---ccC
Q 009517 141 SADSIERAWQILDQIPGRATGAYS----HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---IRS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~----~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---~~~ 213 (533)
|+.+++++.+.+..........|. ...+..+++++++++++ .++++|++|+|+++++..+++++ . .
T Consensus 39 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t~al~~~~~~l~~~~-~ 111 (406)
T 3cai_A 39 PDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVN------ADPGGVVLGADRAVLLSLLAEASSSRA-G 111 (406)
T ss_dssp CHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEEESCHHHHHHHHHHHTGGGG-B
T ss_pred CHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEeCChHHHHHHHHHHHhhcc-C
Confidence 789999998888753211111232 24457888999988874 56789999999999999999987 5 6
Q ss_pred CCCeEEEcCCcCcchHHHHHH----hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 214 ENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
+||+|+++.|+|+.+...+.. .|++++.++++++ ++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 112 ~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~- 183 (406)
T 3cai_A 112 LGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISK------STRLVAVNSASGTLGGVTD- 183 (406)
T ss_dssp TTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCT------TEEEEEEESBCTTTCBBCC-
T ss_pred CCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCC------CceEEEEeCCcCCccccCC-
Confidence 899999999999987655544 6999999998743 457899999999975 7999999999999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE-EEEEecC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG-YMEVTGF 368 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG-~v~~~~~ 368 (533)
+++|.++|+++|+++|+||+|.. +..+ .++.. + ..+ +++.|+||.+ | ++ +| |+++
T Consensus 184 --l~~i~~l~~~~~~~li~D~a~~~----g~~~-~~~~~----~---~~d---~~~~s~~K~~-g-~~--~G~~~~~--- 239 (406)
T 3cai_A 184 --LRAMTKLVHDVGALVVVDHSAAA----PYRL-LDIRE----T---DAD---VVTVNAHAWG-G-PP--IGAMVFR--- 239 (406)
T ss_dssp --CHHHHHHHHHTTCEEEEECTTTT----TTCC-CCHHH----H---CCS---EEEEEGGGGT-S-CS--CEEEEES---
T ss_pred --HHHHHHHHHHcCCEEEEEccccc----CCCC-CCchh----c---CCC---EEEeehhhhc-C-CC--cCeEEEE---
Confidence 88999999999999999999974 2111 22222 2 234 7789999976 5 44 89 9987
Q ss_pred CHHHHHHHHHhhh----------ccccCChHHHHHHHHHcCCCCC-C----ChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 369 SAEVREQIYKVAS----------VNLCSNISGQILASLVMSPPKV-G----DESYESYCAERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 369 ~~~~~~~l~~~~~----------~~~~~~~~~q~a~~~~L~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 433 (533)
++++++.+..... ..++++..++.++..+++.... + ......+.+++++++++++++++++.+.|
T Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 319 (406)
T 3cai_A 240 DPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSL 319 (406)
T ss_dssp CHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 8888776654321 1234566665555444421000 0 00001122246778888999999999999
Q ss_pred hcCCCceEecCC---ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCC------CCCCCCCCceEEE
Q 009517 434 NSLEGITCNKAE---GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGS------GFGQVPGTWHFRC 504 (533)
Q Consensus 434 ~~~~g~~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~------~f~~~~g~~~iRi 504 (533)
++++|+.+..+. ++ ++++.++ . . +...++ +.|.++||.+.+|. .|+...+.+++||
T Consensus 320 ~~~~~~~~~~~~~~~~~-~~~~~~~--~----------~-~~~~~~-~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRi 384 (406)
T 3cai_A 320 RSLPLVMLIGRPEAQIP-VVSFAVH--K----------V-PADRVV-QRLADNGILAIANTGSRVLDVLGVNDVGGAVTV 384 (406)
T ss_dssp HTCTTEEECCCCSSBCS-EEEEEET--T----------B-CHHHHH-HHHHHTTEECEECCSCHHHHHHTTTTTTCCEEE
T ss_pred hcCCCeEEcCCccccCC-EEEEEEC--C----------c-CHHHHH-HHHHHCCcEEecCChHHHHHHcCCCCCCCeEEE
Confidence 998888887664 55 4554443 1 1 233444 44567899999987 4443223458999
Q ss_pred Eec--CCcCcHHHHHHHHHH
Q 009517 505 TIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 505 s~~--~~~e~i~~~~~~l~~ 522 (533)
++. .+++++++++++|++
T Consensus 385 s~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 385 GLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp ECCTTCCHHHHHHHHHHHHT
T ss_pred EeecCCCHHHHHHHHHHHHH
Confidence 997 578899999998875
No 105
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=2.4e-31 Score=279.03 Aligned_cols=343 Identities=11% Similarity=0.015 Sum_probs=236.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-------C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------S 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------~ 213 (533)
|+++++++.+++.+. ...|....+..++++++++++.+..+ .+.++|++|+|+++|++.++++++. .
T Consensus 69 ~p~v~~A~~~~~~~~----~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~ 142 (460)
T 3gju_A 69 RQKIADAIATQAKNL----AYYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDANETNIKLIWYYNNVLGRP 142 (460)
T ss_dssp CHHHHHHHHHHHHHH----SCCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc----cccccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 689999999988762 23455555566777888888877654 4578999999999999999999872 1
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCC-------------eEEEEecCC---CCCCCCC--------HHHHHHHHHHHHhcCC
Q 009517 214 ENDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE---ATGWGLE--------TSEVKKQLEAAKAKGI 269 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~-------------~~~~v~~~~---~~~~~ld--------~~~l~~~i~~~~~~g~ 269 (533)
++++|++.+|+|+++.......+. .+..++... .++++.+ +++|+++++... ..
T Consensus 143 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~ 220 (460)
T 3gju_A 143 EKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PE 220 (460)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GG
T ss_pred CCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CC
Confidence 458999999999998776665532 234444221 1122444 588888887421 12
Q ss_pred CeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecC
Q 009517 270 TVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (533)
Q Consensus 270 ~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 348 (533)
++++|+++.++|++|. +++++.+++|+++|++||+++|+||+|++|.+.|. ...+.. .++ .+| +.+|
T Consensus 221 ~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~~~~~--~~~---~pd-----i~t~ 288 (460)
T 3gju_A 221 TIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT--MFGSDH--YGI---KPD-----LITI 288 (460)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHHH--HTC---CCS-----EEEE
T ss_pred CEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--cchHhh--cCC---CCC-----eeee
Confidence 5777777777888887 77888999999999999999999999999866553 222211 122 466 4578
Q ss_pred CccCCCCCC-CeeEEEEEecCCHHHHHHHHHh-------h-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHH
Q 009517 349 SKGYYGECG-KRGGYMEVTGFSAEVREQIYKV-------A-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (533)
Q Consensus 349 SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~-------~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 419 (533)
||++ + .| +|+||+++ ++++++.+... . ..+++.++++|+++.++|+.. + ..+.+++++
T Consensus 289 sK~l-~-gG~~~lg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~-------~-~~~~~~~~~ 355 (460)
T 3gju_A 289 AKGL-T-SAYAPLSGVIV---ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELI-------D-EMDLVTNAG 355 (460)
T ss_dssp CGGG-T-TTSSCCEEEEE---EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHH-------H-HTTHHHHHH
T ss_pred ehhh-c-CCCCCeEEEEE---CHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHH-------H-hccHHHHHH
Confidence 9998 4 36 89999998 99999998642 2 367889999999999888411 0 011234444
Q ss_pred HHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCC----CChHHHHHHHHHccceEEEcCCCCCC
Q 009517 420 SSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKT----VPDAFYCRRLLNATGIVLVPGSGFGQ 495 (533)
Q Consensus 420 ~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gV~v~pg~~f~~ 495 (533)
+..+..++.|.+.+++++++..+++.|.|+.+ .+..... ..... .....++ +.|.++||.+.|+.
T Consensus 356 ~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~---- 424 (460)
T 3gju_A 356 ETGAYFRAELAKAVGGHKNVGEVRGDGMLAAV-EFVADKD-----DRVFFDASQKIGPQVA-TALAASGVIGRAMP---- 424 (460)
T ss_dssp HHHHHHHHHHHHHHTTSTTEEEEEEETTEEEE-EECSBTT-----TTBCCCGGGCHHHHHH-HHHHHTTEECEECS----
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEE-EEccCcc-----ccccccchHHHHHHHH-HHHHHCCeEEecCC----
Confidence 55555566666777777777888888876544 3321100 00000 0022333 44556799999864
Q ss_pred CCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHHHH
Q 009517 496 VPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 496 ~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+.+++||++ ..++++|++++++|+++++++.+
T Consensus 425 --~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 425 --QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp --SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred --CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123999996 48899999999999999987653
No 106
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1e-31 Score=274.60 Aligned_cols=321 Identities=10% Similarity=0.045 Sum_probs=233.4
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 138 GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 138 ~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
..+|+++++++.+.+.. ...+.......++++++++++ |.+.++++|++|+|+++++. ++..++ ++||+
T Consensus 11 ~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~----~~~~~~~~v~~~~g~t~al~-~~~~~~-~~gd~ 79 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVG-----FTSKEFVEALAYSLKGLRYVM----GASKNYQPLIIPGGGTSAME-SVTSLL-KPNDK 79 (384)
T ss_dssp SCCCHHHHHHTTCCSCC-----TTSHHHHHHHHHHHHHHHHHH----TCCTTSEEEEEESCHHHHHH-HGGGGC-CTTCE
T ss_pred CCCCHHHHHHhhccccc-----cccHHHHHHHHHHHHHHHHHh----CCCCCCcEEEEcCCcHHHHH-HHHhhc-CCCCE
Confidence 33478888776554432 111222334566677777766 43333388999999999999 998887 89999
Q ss_pred EEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 218 ILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 218 Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
|++++|+|++ +...+...|++++.++++. ++.+|++++++++++. ++++|++++|+||||.+++ +++|
T Consensus 80 vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i 149 (384)
T 3zrp_A 80 ILVVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREP---VKDV 149 (384)
T ss_dssp EEEECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECC---HHHH
T ss_pred EEEecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECc---HHHH
Confidence 9999999966 5566677899999999876 4578999999999874 6999999999999999999 8899
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
.++|++||+++|+|++|...... .++ ... ..+ +++.|+||+++|+ .++||+++ ++++++.
T Consensus 150 ~~l~~~~~~~li~D~a~~~~~~~-----~~~----~~~---~~d---~~~~s~~K~~~~~--~g~g~~~~---~~~~~~~ 209 (384)
T 3zrp_A 150 INKIRKYVELIVVDGVSSVGAEE-----VKA----EEW---NVD---VYLTASQKALGSA--AGLGLLLL---SPKALSI 209 (384)
T ss_dssp HHHHGGGEEEEEEECTTTTTTSC-----CCT----TTT---TCS---EEEEETTSTTCCC--SSEEEEEE---CHHHHHH
T ss_pred HHHHHhcCCEEEEECcccccCcc-----ccc----ccc---CCC---EEEecCcccccCC--CceEEEEE---CHHHHHH
Confidence 99999999999999998743221 111 111 123 7899999988544 45899998 8888877
Q ss_pred H-------------HHhhh----------cc-ccCChHHHHHHHHHcCCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHH
Q 009517 376 I-------------YKVAS----------VN-LCSNISGQILASLVMSPPKVGDESYESYCAE-RDGILSSLARRAKTLE 430 (533)
Q Consensus 376 l-------------~~~~~----------~~-~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 430 (533)
+ ..... .. .+++...+.++..+++ ...++ +++++++++++++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~l~ 279 (384)
T 3zrp_A 210 LDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFR----------LIEKEGIENRIKRHTMVASAIR 279 (384)
T ss_dssp HHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHH----------HHHhcCHHHHHHHHHHHHHHHH
Confidence 7 22211 11 2556666666655553 11222 5778888999999999
Q ss_pred HHHhcCCCceEecCC----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 431 DAFNSLEGITCNKAE----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 431 ~~L~~~~g~~~~~~~----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
+.|+++ |+.+..+. +++++|+.++. .+...++.. |.++||.+.||..+.. ++|||++
T Consensus 280 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-l~~~gi~v~~g~~~~~----~~iRi~~ 340 (384)
T 3zrp_A 280 AGLEAL-GLEIVARRPESYSNTVTGVILKV-------------ADPQKVLAG-TVNEGVEFAPGVHPAF----KYFRIGH 340 (384)
T ss_dssp HHHHHT-TCCBSCSSGGGBCSSEEEEECSS-------------SCHHHHHHH-HHTTTCCCEECCCTTC----CEEEEEC
T ss_pred HHHHHC-CCeEccCcccccCccEEEEECCC-------------CCHHHHHHH-HHHCCEEEecCCCCCc----CEEEEec
Confidence 999998 88887776 45666654441 123444444 5567999999875432 4999998
Q ss_pred c--CCcCcHHHHHHHHHHHHHHHH
Q 009517 507 L--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 507 ~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
. .+++++++++++|+++++++.
T Consensus 341 ~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 341 MGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHHHHcC
Confidence 6 788999999999999998764
No 107
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.3e-31 Score=277.83 Aligned_cols=325 Identities=12% Similarity=0.100 Sum_probs=221.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
|+++++++.+++.... .|++..+..+++.++++.+.+.+|.+. +++|++|+|+++++..+++.+...+|++|++
T Consensus 61 ~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~ 134 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLA-----HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAIEASIKVVKNTGRKYIIA 134 (419)
T ss_dssp CHHHHHHHHHHHTTSC-----CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CHHHHHHHHHHHhhCc-----cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHHHHHHHHHHHhhCCcEEE
Confidence 5889999999887521 233222333445555555555556433 6899999999999999999876224899999
Q ss_pred cCCcCcchHHHHH-HhC-------------CeEEEEecCCC--CCCC------------CCHHHHH-HHHHHHHhcCCCe
Q 009517 221 PIPQYPLYSASIA-LHG-------------GTLVPYYLDEA--TGWG------------LETSEVK-KQLEAAKAKGITV 271 (533)
Q Consensus 221 ~~p~~~~~~~~~~-~~g-------------~~~~~v~~~~~--~~~~------------ld~~~l~-~~i~~~~~~g~~~ 271 (533)
++|+|+++..... ..| ..++.++.+.. ..|+ +|+++|+ +++++.. ...++
T Consensus 135 ~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~ 213 (419)
T 2eo5_A 135 FLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEV 213 (419)
T ss_dssp ETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGE
T ss_pred ECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCE
Confidence 9999997655433 222 24667776432 1123 4688999 8887410 00156
Q ss_pred eEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCc
Q 009517 272 RALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (533)
Q Consensus 272 ~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 350 (533)
++|+++..|||||. +++++++++|+++|++||+++|+||+|.+|.+.|. ...+.. ..+ .++ +.||||
T Consensus 214 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~--~~~~~~--~~~---~~d-----~~t~sK 281 (419)
T 2eo5_A 214 AGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK--LFAIEN--FNT---VPD-----VITLAK 281 (419)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEEECG
T ss_pred EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc--hhhHHh--cCC---CCC-----EEEecc
Confidence 55554433568996 77899999999999999999999999999876543 111111 112 355 348999
Q ss_pred cCCCCCC-CeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 009517 351 GYYGECG-KRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTL 429 (533)
Q Consensus 351 ~~~gl~G-~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 429 (533)
.+ | .| +|+||+++ +++++ .+......+++.++++|+++.++|+ . .+++.++++++++++
T Consensus 282 ~~-~-~G~~riG~~~~---~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~-----------~---~~~~~~~~~~~~~~l 341 (419)
T 2eo5_A 282 AL-G-GGIMPIGATIF---RKDLD-FKPGMHSNTFGGNALACAIGSKVID-----------I---VKDLLPHVNEIGKIF 341 (419)
T ss_dssp GG-G-TTTSCCEEEEE---EGGGC-CC------CCCCCHHHHHHHHHHHH-----------H---HHHHHHHHHHHHHHH
T ss_pred cc-c-CCccceEEEEE---chHhh-cCCcccCCCCCCCHHHHHHHHHHHH-----------H---HHHHHHHHHHHHHHH
Confidence 99 5 49 99999998 77777 6621334678889999999988873 1 122778889999999
Q ss_pred HHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--
Q 009517 430 EDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-- 507 (533)
Q Consensus 430 ~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-- 507 (533)
.+.|+++ +..+++.|.| +|+++. +... ... ++..++ ++||.+.|+. .+++||++.
T Consensus 342 ~~~L~~~--~~~~~~~g~~-~~i~~~-~~~~----------~~~-~~~~l~-~~Gv~v~~~~-------~~~lRis~~~~ 398 (419)
T 2eo5_A 342 AEELQGL--ADDVRGIGLA-WGLEYN-EKKV----------RDR-IIGESF-KRGLLLLPAG-------RSAIRVIPPLV 398 (419)
T ss_dssp HHHHTTS--SSEEEEETTE-EEEECS-CHHH----------HHH-HHHHHH-HTTEECEEET-------TTEEEECCCTT
T ss_pred HHHHHHh--hhheEeeeEE-EEEEEe-cCcc----------HHH-HHHHHH-HCCCEEecCC-------CCEEEEECCCC
Confidence 9999876 4555666654 454442 2110 123 455554 7899999853 238999874
Q ss_pred CCcCcHHHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+++++++++++|+++++++
T Consensus 399 ~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 399 ISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp CCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 78999999999999988653
No 108
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=4.7e-32 Score=278.39 Aligned_cols=308 Identities=11% Similarity=0.120 Sum_probs=227.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE------ 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~------ 214 (533)
++.+.+++.+++.+... ....|.. .-..++++.+++++ | .+++++++|+++|+..+++.+. .+
T Consensus 54 ~p~v~~a~~~~~~~~~~-~~~~~~~-~~~~~l~~~la~~~----g----~~~v~~~~~gt~a~~~al~~~~-~~~~~~~~ 122 (392)
T 3ruy_A 54 HPKIINALIDQANRVTL-TSRAFHS-DQLGPWYEKVAKLT----N----KEMVLPMNTGAEAVETAIKTAR-RWAYDVKK 122 (392)
T ss_dssp CHHHHHHHHHHHTTCSC-CCTTSEE-TTHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHHHH-HHHHHTSC
T ss_pred CHHHHHHHHHHHHhccc-cccccCC-HHHHHHHHHHHHhc----C----CCEEEEeCcHHHHHHHHHHHHH-HhhhhccC
Confidence 68999999998876322 1111222 22566777777665 3 6799999999999999999876 33
Q ss_pred ----CCeEEEcCCcCcchHHHHHHhCCe-------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe
Q 009517 215 ----NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI 277 (533)
Q Consensus 215 ----gd~Vlv~~p~~~~~~~~~~~~g~~-------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~ 277 (533)
+|+|+++.|+|+++...+...+.. +..++. .|+++|++++++ ++++|+++
T Consensus 123 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~ 189 (392)
T 3ruy_A 123 VEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITP------NTAAFILE 189 (392)
T ss_dssp CCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCT------TEEEEEEC
T ss_pred CCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhcc------CeEEEEEe
Confidence 679999999999877666554332 333332 279999999975 89999999
Q ss_pred CCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC
Q 009517 278 NPGNPTGQVLAEEN-QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (533)
Q Consensus 278 ~p~NPtG~~~s~~~-l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~ 356 (533)
+|+||||.+++.++ +++|+++|++||+++|+||+|.+|.+.+. ...... .++ .+| +.||||+++ +
T Consensus 190 ~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~--~~~---~~d-----~~~~SK~l~--g 255 (392)
T 3ruy_A 190 PIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK--VFACDW--DNV---TPD-----MYILGKALG--G 255 (392)
T ss_dssp SSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEEECGGGG--T
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc--chhhhc--cCC---CCC-----EEEEchhhh--C
Confidence 99999999996555 99999999999999999999998777553 111111 111 345 347899984 3
Q ss_pred C-CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 357 G-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 357 G-~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
| +|+||+++ ++++++.+..... .+++++++++.++.++|+ ..+. ++++++++++++++.+.|+
T Consensus 256 G~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~-----------~~~~-~~~~~~~~~~~~~l~~~L~ 320 (392)
T 3ruy_A 256 GVFPISCAAA---NRDILGVFEPGSHGSTFGGNPLACAVSIAALE-----------VLEE-EKLTERSLQLGEKLVGQLK 320 (392)
T ss_dssp TTSCCEEEEE---CHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHH-----------HHHH-TTHHHHHHHHHHHHHHHHT
T ss_pred ChhhhEEEEE---CHHHHhhhccCCcCCCCCCCHHHHHHHHHHHH-----------HHHh-hhHHHHHHHHHHHHHHHHH
Confidence 6 99999998 8888877766544 568889999999988874 1222 5677888999999999999
Q ss_pred cC--CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCc
Q 009517 435 SL--EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQE 510 (533)
Q Consensus 435 ~~--~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~ 510 (533)
++ +.+....+.|+++.|. ++. +...++.. |.++||.+.||. .+++||++ ..++
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~-~~~--------------~~~~l~~~-l~~~gi~v~~~~-------~~~iRi~~~~~~~~ 377 (392)
T 3ruy_A 321 EIDNPMITEVRGKGLFIGIE-LNE--------------PARPYCEQ-LKAAGLLCKETH-------ENVIRIAPPLVISE 377 (392)
T ss_dssp TCCCTTEEEEEEETTEEEEE-ESS--------------CSHHHHHH-HHTTTEECCCBT-------TTEEEECCCTTCCH
T ss_pred HhcCCCceEEEeeeeEEEEE-Ecc--------------hHHHHHHH-HHHCCcEEecCC-------CCEEEEECCCCCCH
Confidence 87 4467777888877663 431 13344444 557899999863 23899996 4788
Q ss_pred CcHHHHHHHHHHHH
Q 009517 511 DKIPAIVTRLTDFH 524 (533)
Q Consensus 511 e~i~~~~~~l~~~l 524 (533)
+++++++++|++++
T Consensus 378 ~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 378 EDLEWAFQKIKAVL 391 (392)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999876
No 109
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1e-31 Score=281.06 Aligned_cols=331 Identities=15% Similarity=0.096 Sum_probs=224.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-CCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-~gd~Vl 219 (533)
|+++++++.+++.+. ..|....+..+++.++++++.+.++.. ..++|++|+|+++|++.+++.++.. .+++|+
T Consensus 82 ~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii 155 (453)
T 4ffc_A 82 HPAVAAAIADQATHF-----THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEAVENAIKVARLATGRPAVV 155 (453)
T ss_dssp CHHHHHHHHHHHHHC-----SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhc-----cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEE
Confidence 799999999999873 345555556677777777777765422 2579999999999999999887522 348999
Q ss_pred EcCCcCcchHHHHHHhCC--------------eEEEEecCC--CCCCCCCH--------HHHHHHHHHHHhcCCCeeEEE
Q 009517 220 CPIPQYPLYSASIALHGG--------------TLVPYYLDE--ATGWGLET--------SEVKKQLEAAKAKGITVRALV 275 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~--------------~~~~v~~~~--~~~~~ld~--------~~l~~~i~~~~~~g~~~~~ii 275 (533)
+.+++|+++...+...+. .+..++... .+.++.+. +.|++.+.. +..+++
T Consensus 156 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~------~~~aav 229 (453)
T 4ffc_A 156 AFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGA------QSLAAI 229 (453)
T ss_dssp EETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCG------GGEEEE
T ss_pred EEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCC------CCEEEE
Confidence 999999998776665532 244444431 11234442 333333322 455666
Q ss_pred EeCCCCCCc--cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCC
Q 009517 276 VINPGNPTG--QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (533)
Q Consensus 276 l~~p~NPtG--~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 353 (533)
++.|.|++| ++++++.+++|+++|++||+++|+||+|.+|.+.|. ...+.. .++ .++ +.+|||++
T Consensus 230 i~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~--~~a~~~--~~~---~pd-----i~t~sK~~- 296 (453)
T 4ffc_A 230 IIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA--WFASEH--EGI---VPD-----IVTMAKGI- 296 (453)
T ss_dssp EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHH--HTC---CCS-----EEEECGGG-
T ss_pred EEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc--cchhhh--cCC---Ccc-----hHhhhhhh-
Confidence 777777666 466888899999999999999999999999876553 222222 122 455 55899999
Q ss_pred CCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH-
Q 009517 354 GECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLED- 431 (533)
Q Consensus 354 gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 431 (533)
+. |+|+||+++ ++++++.+.+... .++++++++|+++.++|+. .+. +.+.++++++++++++
T Consensus 297 ~~-G~~~G~~~~---~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~-----------~~~-~~~~~~~~~~~~~l~~~ 360 (453)
T 4ffc_A 297 AG-GMPLSAVTG---RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGV-----------MRE-LDLPARARAIEASVTSR 360 (453)
T ss_dssp GT-TSSCEEEEE---EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHH-----------HHH-TTHHHHHHHHHHHHHHH
T ss_pred cC-CcCeEEEEE---CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHH-----------hhh-hhHHHHHHHHHHHHHHH
Confidence 54 999999998 8999888766544 6789999999999888741 110 2233334444444444
Q ss_pred ---HHhcCCCceEecCCceeEEecccCC-----CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEE
Q 009517 432 ---AFNSLEGITCNKAEGAMYLFPRIQL-----PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFR 503 (533)
Q Consensus 432 ---~L~~~~g~~~~~~~gg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iR 503 (533)
.+.+++++..+++.|.| +|+.+.. |... ....++ ..|.++||.+.|+..|+. ++|
T Consensus 361 l~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~----------~~~~~~-~~l~~~Gv~v~~~~~~~~-----~iR 423 (453)
T 4ffc_A 361 LSALAEEVDIIGEVRGRGAM-LAIEIVKPGTLEPDAA----------LTKSIA-AEALSQGVLILTCGTFGN-----VIR 423 (453)
T ss_dssp HHHHHHHCSSEEEEEEETTE-EEEEEBCTTSCCBCHH----------HHHHHH-HHHHHTTEECCEECTTSC-----EEE
T ss_pred HHHHHhhCCCeEEEEeeceE-EEEEEecCcccCCCHH----------HHHHHH-HHHHhCCCEEecCCCCCC-----EEE
Confidence 44445667777777665 4444421 1110 123333 445568999999766542 889
Q ss_pred EEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 504 CTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 504 is~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
|++. .++++|++++++|+++++++.+
T Consensus 424 i~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 424 LLPPLVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9874 7899999999999999988654
No 110
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.98 E-value=1.6e-31 Score=269.93 Aligned_cols=316 Identities=13% Similarity=0.094 Sum_probs=231.6
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeE
Q 009517 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (533)
Q Consensus 139 ~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~V 218 (533)
.+|+.+++++.+.+.. ...|....+..++|++++++++ .++++|++|+|+++++..+++.+. ++||+|
T Consensus 11 ~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g------~~~~~i~~~~g~t~a~~~~~~~~~-~~gd~v 78 (352)
T 1iug_A 11 RLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFR------TEGEVLILTGSGTLAMEALVKNLF-APGERV 78 (352)
T ss_dssp CCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHT------CSSEEEEEESCHHHHHHHHHHHHC-CTTCEE
T ss_pred CCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhC------CCCceEEEcCchHHHHHHHHHhcc-CCCCeE
Confidence 3478888887765542 1223333457889999999875 456899999999999999999998 799999
Q ss_pred EEcCCcCcchH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 219 LCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 219 lv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+++.|+|+++. ..+...|.+++.++++. ++.+|++++++ + ++++|++++|+||||.+++ +++|.
T Consensus 79 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~------~~~~v~~~~~~nptG~~~~---l~~i~ 144 (352)
T 1iug_A 79 LVPVYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---E------GYAGLLLVHSETSTGALAD---LPALA 144 (352)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---S------SCSEEEEESEETTTTEECC---HHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---c------CCcEEEEEEecCCcceecC---HHHHH
Confidence 99999999875 44566899999999865 34688888876 2 6899999999999999999 88999
Q ss_pred HHHHHc--CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 297 DFCKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 297 ~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
++|++| |+++|+||+|.. +..+ ..+ ..+ ..+ +++.|+||++.|++ ++||+++ ++++++
T Consensus 145 ~l~~~~~~~~~li~D~a~~~----~~~~-~~~----~~~---~~d---~~~~s~~K~~~~~~--g~G~~~~---~~~~~~ 204 (352)
T 1iug_A 145 RAFKEKNPEGLVGADMVTSL----LVGE-VAL----EAM---GVD---AAASGSQKGLMCPP--GLGFVAL---SPRALE 204 (352)
T ss_dssp HHHHHHCTTCEEEEECTTTB----TTBC-CCS----GGG---TCS---EEEEESSSTTCCCS--CEEEEEE---CHHHHH
T ss_pred HHHHhhCCCCEEEEECCccc----cCcc-eec----ccc---Cee---EEEecCcccccCCC--ceeEEEE---CHHHHH
Confidence 999999 999999999973 2111 111 111 233 77899999764544 4799998 888765
Q ss_pred H---------HHH----hh-h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 375 Q---------IYK----VA-S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 375 ~---------l~~----~~-~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
. +.. .. . ..++++...+.++.++++. +.+++++++++++++++++.+.|+++ |+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 273 (352)
T 1iug_A 205 RLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEE----------VLPRLEEHLALKAWQNALLYGVGEEG-GL 273 (352)
T ss_dssp TCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH----------HGGGHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 4 221 11 1 3355677777777666631 11225678888999999999999998 98
Q ss_pred eEecCC-ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHH
Q 009517 440 TCNKAE-GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAI 516 (533)
Q Consensus 440 ~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~ 516 (533)
.+..+. .+.++|+.++ .+ . +...++.. |.++||.+.||..+ .+.+++||++. .++++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~--~~---------~-~~~~~~~~-l~~~gi~v~~~~~~---~~~~~iRi~~~~~~~~~~i~~~ 337 (352)
T 1iug_A 274 RPVPKRFSPAVAAFYLP--EG---------V-PYARVKEA-FAQRGAVIAGGQGP---LKGKVFRLSLMGAYDRYEALGV 337 (352)
T ss_dssp EESCSSBCTTCEEEECC--TT---------C-CHHHHHHH-HHTTTEECEECCGG---GTTTEEEECCCSSCCHHHHHHH
T ss_pred cccccccCCeEEEEEcC--CC---------C-CHHHHHHH-HHHCCEEEEeCCCc---cCCCEEEEEccccCCHHHHHHH
Confidence 887774 5566775543 11 1 23444444 55679999998843 22349999997 578999999
Q ss_pred HHHHHHHHHHH
Q 009517 517 VTRLTDFHKNF 527 (533)
Q Consensus 517 ~~~l~~~l~~~ 527 (533)
+++|+++++++
T Consensus 338 ~~~l~~~~~~~ 348 (352)
T 1iug_A 338 AGMFREVLEEI 348 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998775
No 111
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.98 E-value=3.3e-31 Score=277.43 Aligned_cols=337 Identities=13% Similarity=0.096 Sum_probs=226.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc----C---
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----S--- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~--- 213 (533)
|+++++++.+++.+.. + ....+..+++.++++++.+.++ ...+ |++|+|+++|++.+++.++. .
T Consensus 67 ~p~v~~A~~~~~~~~~----~--~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~ 137 (452)
T 3n5m_A 67 RKELAEAAYKQLQTLS----Y--FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEANETAFKIARQYYAQKGEP 137 (452)
T ss_dssp CHHHHHHHHHHHTTCC----C--CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCT
T ss_pred CHHHHHHHHHHHHhcC----C--cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 6899999999987621 1 2233445666666666666555 3344 99999999999999998861 2
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCCe-------------EEEEecCCCCCCCC-C---------HHHHHHHHHHHHhcCCC
Q 009517 214 ENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGL-E---------TSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~~-------------~~~v~~~~~~~~~l-d---------~~~l~~~i~~~~~~g~~ 270 (533)
++++|++.+|+|+++.......+.. +..++......+.. | +++|+++++.. ...+
T Consensus 138 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~ 215 (452)
T 3n5m_A 138 HRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSET 215 (452)
T ss_dssp TCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGG
T ss_pred CCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCC
Confidence 5789999999999987666655432 23333211111111 2 89999999721 0126
Q ss_pred eeEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecC
Q 009517 271 VRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (533)
Q Consensus 271 ~~~iil~~p-~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 348 (533)
+++|+++.+ +| ||.++ +++++++|+++|++||+++|+||+|++|.+.|. .... +..+..++ +.+|
T Consensus 216 ~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~--~~~~-----~~~~~~~d-----i~t~ 282 (452)
T 3n5m_A 216 IAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGK--AFGF-----MNYDVKPD-----IITM 282 (452)
T ss_dssp EEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGG-----GGTTCCCS-----EEEE
T ss_pred EEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccc--cchh-----hhcCCCCC-----EEee
Confidence 788888888 89 99755 888899999999999999999999999876553 2111 11111455 4579
Q ss_pred CccCCCCCC-CeeEEEEEecCCHHHHHHHHH------h-hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHH
Q 009517 349 SKGYYGECG-KRGGYMEVTGFSAEVREQIYK------V-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (533)
Q Consensus 349 SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~------~-~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~ 420 (533)
||++ +. | +|+||+++ ++++++.+.+ + ...++++++++++++.++|+. .+. +.+.+
T Consensus 283 sK~l-~~-G~~~ig~~~~---~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~-----------~~~-~~~~~ 345 (452)
T 3n5m_A 283 AKGI-TS-AYLPLSATAV---KREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEI-----------IEN-ENLIE 345 (452)
T ss_dssp CGGG-GT-TSSCCEEEEE---EHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHH-----------HHH-TTHHH
T ss_pred cccc-cC-CCcceEEEEE---CHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHH-----------HHh-ccHHH
Confidence 9999 54 9 99999998 9999988743 1 236788999999999888741 111 23334
Q ss_pred HHHHHHHHHHHHH----hcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCC--ChHHHHHHHHHccceEEEcCCCCC
Q 009517 421 SLARRAKTLEDAF----NSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV--PDAFYCRRLLNATGIVLVPGSGFG 494 (533)
Q Consensus 421 ~~~~~~~~l~~~L----~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gV~v~pg~~f~ 494 (533)
+++++++++++.| .+++++..+++.|.|+.+ .+...... ..... ....++ +.|.++||.+.|+..|.
T Consensus 346 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~-----~~~~~~~~~~~~~-~~l~~~Gv~~~~~~~~~ 418 (452)
T 3n5m_A 346 RSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGI-ELVNDKET-----KEPIDNDKIASVV-NACKEKGLIIGRNGMTT 418 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEE-EEEEETTT-----TEECCHHHHHHHH-HHHHHTTEECEECTTSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEE-EEecCCcc-----cCCCCHHHHHHHH-HHHHHCCcEEeecCccc
Confidence 4444444444444 455667778888776543 33100000 00000 012333 44556899999998775
Q ss_pred CCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHH
Q 009517 495 QVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 495 ~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~ 526 (533)
..+.++|||++ ..++++|++++++|++++++
T Consensus 419 -~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 419 -AGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp -TTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred -CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 34456999986 48999999999999998753
No 112
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.98 E-value=3.6e-31 Score=277.59 Aligned_cols=341 Identities=13% Similarity=0.095 Sum_probs=230.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------- 213 (533)
|+++++++.+++.+. ...|+...+..++++++++++.+.++ .+.++|++|+|+++|++.+++.++ .
T Consensus 68 ~p~v~~A~~~~~~~~----~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA~~~al~~~~-~~~~~~g~ 140 (459)
T 4a6r_A 68 RKDFAEAARRQMEEL----PFYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSESVDTMIRMVR-RYWDVQGK 140 (459)
T ss_dssp CHHHHHHHHHHHHHC----SCCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHHHHHHHHHHH-HHHHHTTC
T ss_pred CHHHHHHHHHHHHhc----cccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHH-HHHHhcCC
Confidence 689999999999873 22455545566778888888877765 456799999999999999999987 4
Q ss_pred -CCCeEEEcCCcCcchHHHHHHhCC-------------eEEEEecCC---CCCCCCC--------HHHHHHHHHHHHhcC
Q 009517 214 -ENDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE---ATGWGLE--------TSEVKKQLEAAKAKG 268 (533)
Q Consensus 214 -~gd~Vlv~~p~~~~~~~~~~~~g~-------------~~~~v~~~~---~~~~~ld--------~~~l~~~i~~~~~~g 268 (533)
++++|++.+|+|+++.......+. .+..++... .+.+ +| +++|++.++....
T Consensus 141 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~-- 217 (459)
T 4a6r_A 141 PEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA-- 217 (459)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--
T ss_pred CCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC--
Confidence 468999999999998876666543 222333211 0112 34 7888888875310
Q ss_pred CCeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEec
Q 009517 269 ITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQS 347 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 347 (533)
.++++|+++.++|++|. +++++++++|+++|++||+++|+||+|.+|.+.|. ...+.. .++ .+| +.+
T Consensus 218 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~--~~~~~~--~~~---~pd-----i~t 285 (459)
T 4a6r_A 218 DKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE--WFGHQH--FGF---QPD-----LFT 285 (459)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHH--HTC---CCS-----EEE
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--cchHhh--cCC---CCC-----eee
Confidence 14566665555666666 56999999999999999999999999999876653 222211 122 466 447
Q ss_pred CCccCCCCCCCeeEEEEEecCCHHHHHHHH---Hhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHH-HHH
Q 009517 348 VSKGYYGECGKRGGYMEVTGFSAEVREQIY---KVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL-SSL 422 (533)
Q Consensus 348 ~SK~~~gl~G~riG~v~~~~~~~~~~~~l~---~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~-~~~ 422 (533)
|||++ +..|+|+||+++ ++++++.+. ... ..+++.++++++++.++|+.. +. .+.+++.+ +..
T Consensus 286 ~sK~l-~gg~~~lg~v~~---~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~-------~~-~~~~~~~~~~~~ 353 (459)
T 4a6r_A 286 AAKGL-SSGYLPIGAVFV---GKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAAL-------RD-EGIVQRVKDDIG 353 (459)
T ss_dssp ECGGG-GTTSSCCEEEEE---CHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHH-------HH-TCHHHHHHHTHH
T ss_pred hhhhh-cCCCCCccceee---CHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHH-------hc-chHHHHHHHHHH
Confidence 89998 433499999998 999999987 333 367899999999998888411 00 01122233 233
Q ss_pred HHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCC----ChHHHHHHHHHccceEEEcCCCCCCCCC
Q 009517 423 ARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV----PDAFYCRRLLNATGIVLVPGSGFGQVPG 498 (533)
Q Consensus 423 ~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~g 498 (533)
+..++.|.+.|.+++++..+++.|.|+.+ .+..... ...... ....++.. |.++||++.|+.
T Consensus 354 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~g------- 419 (459)
T 4a6r_A 354 PYMQKRWRETFSRFEHVDDVRGVGMVQAF-TLVKNKA-----KRELFPDFGEIGTLCRDI-FFRNNLIMRACG------- 419 (459)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEETTEEEE-EECSBTT-----TTBCCSSTTHHHHHHHHH-HHHTTEECEEET-------
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEEEEEEE-EEecCcc-----ccccccchHHHHHHHHHH-HHHCCeEEecCC-------
Confidence 33344444555556677888888876554 2321100 000000 02334444 456799999852
Q ss_pred CceEEEEe--cCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTI--LPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 499 ~~~iRis~--~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++||++ ..+++++++++++|+++++++.++
T Consensus 420 -~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (459)
T 4a6r_A 420 -DHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQT 452 (459)
T ss_dssp -TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3899996 489999999999999999887654
No 113
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.98 E-value=5.4e-31 Score=271.96 Aligned_cols=321 Identities=11% Similarity=0.033 Sum_probs=232.7
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCCC--cccHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHhccC
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSHS--QGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~--~G~~~lr~aia~~~~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~~ 213 (533)
|..+++++++++.+.+. ..|.+. ....++++.+++++ | .+.++ |++++|+++++..+++.++ +
T Consensus 21 p~~~~~~v~~a~~~~~~-------~~~~~~~~~~~~~~~~~la~~~----~--~~~~~~v~~~~sgt~al~~~~~~~~-~ 86 (411)
T 3nnk_A 21 PINADPRVLRAMSSQLI-------GQYDPAMTHYMNEVMALYRGVF----R--TENRWTMLVDGTSRAGIEAILVSAI-R 86 (411)
T ss_dssp CCCCCHHHHHHHTSCCC-------CTTCHHHHHHHHHHHHHHHHHH----T--CCCSEEEEEESCHHHHHHHHHHHHC-C
T ss_pred CCCCCHHHHHHhhcccc-------ccccHHHHHHHHHHHHHHHHHh----C--CCCCcEEEECCCcHHHHHHHHHHhc-C
Confidence 44457777777654321 122211 12345555555555 4 33444 7888999999999999998 8
Q ss_pred CCCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 214 ENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
+||+|+++.|+|++ +...++..|.+++.++++. ++.+|+++|++++++. ++++|++++|+||||.+.+
T Consensus 87 ~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~--- 156 (411)
T 3nnk_A 87 PGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPW--GEVFTPDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQP--- 156 (411)
T ss_dssp TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---
T ss_pred CCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHhhC-----CCeEEEEeCCCCCcceecc---
Confidence 99999999999987 8888999999999999854 5678999999999875 7999999999999999998
Q ss_pred HHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
+++|+++|++||+++|+||++..... + ..+ . .....+++.|++|++.| +.++||+++ +++
T Consensus 157 l~~i~~l~~~~~~~li~Dea~~~~~~----~-~~~----~------~~~~d~~~~s~~K~l~~--~~g~g~~~~---~~~ 216 (411)
T 3nnk_A 157 LAELGEICRRYDALFYTDATASLGGN----P-LET----D------VWGLDAVSAGMQKCLGG--PSGTSPITL---SAR 216 (411)
T ss_dssp CTTHHHHHHHHTCEEEEECTTTBTTB----C-CCT----T------TTTCSEEECCSTTTTCC--CSSEEEEEE---CHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccCCc----c-cch----h------ccCCcEEEecCccccCC--CCceEEEEE---CHH
Confidence 88999999999999999999864221 1 111 0 11123789999998645 446899998 999
Q ss_pred HHHHHHHhh------------------------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH
Q 009517 372 VREQIYKVA------------------------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (533)
Q Consensus 372 ~~~~l~~~~------------------------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 414 (533)
+++.+.... . ..++++..++.++..+++ ...++
T Consensus 217 ~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~ 286 (411)
T 3nnk_A 217 MEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECAR----------LILQE 286 (411)
T ss_dssp HHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH----------HHHHH
T ss_pred HHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHH----------HHHHh
Confidence 998887543 0 123456666666666553 12233
Q ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCceEecCCc---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcC
Q 009517 415 -RDGILSSLARRAKTLEDAFNSLEGITCNKAEG---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPG 490 (533)
Q Consensus 415 -~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg 490 (533)
+++++++++++++++.+.|+++ |+.+..+.+ +.++++.+ |.+ . +...++..+++++||.+.||
T Consensus 287 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~~~---------~-~~~~l~~~l~~~~gi~v~~g 353 (411)
T 3nnk_A 287 GLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVI--PQG---------I-NGDQARKLMLEDFGIEIGTS 353 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEEC--CTT---------C-CHHHHHHHHHHHHSEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEEC--CCC---------C-CHHHHHHHHHHhcCeEEeCc
Confidence 6778889999999999999998 888776554 45566444 211 1 24455556666669999998
Q ss_pred CCCCCCCCCceEEEEe-c--CCcCcHHHHHHHHHHHHHHH
Q 009517 491 SGFGQVPGTWHFRCTI-L--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 491 ~~f~~~~g~~~iRis~-~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
.... +.++|||++ . .+++++++++++|+++++++
T Consensus 354 ~~~~---~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 354 FGPL---HGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp CGGG---TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred cCCC---CCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 4332 234999998 5 47889999999999998864
No 114
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.98 E-value=4e-31 Score=270.04 Aligned_cols=326 Identities=13% Similarity=0.097 Sum_probs=234.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC----CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc---cC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~----~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~ 213 (533)
|+.+++++.+.+.+........|.. ..+..+++++++++++ .++++|++|+|+++|+..+++.+. .+
T Consensus 13 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t~a~~~~~~~l~~~~~~ 86 (382)
T 4eb5_A 13 DERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN------GGGGTVVFTSGATEANNLAIIGYAMRNAR 86 (382)
T ss_dssp CHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CTTEEEEEESSHHHHHHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEEcCchHHHHHHHHHHHHhhccC
Confidence 7999999998887532211112432 2346777777777764 456799999999999999999885 14
Q ss_pred CCCeEEEcCCcCcchHHHHHH---hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 214 ENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
+||+|++++|+|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 87 ~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~-- 156 (382)
T 4eb5_A 87 KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP-- 156 (382)
T ss_dssp GCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC--
T ss_pred CCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcC------CCeEEEEeccCCCccccCC--
Confidence 899999999999988777654 699999999874 457999999999876 7999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~ 370 (533)
+++|+++|++||++ |+||+|.. +..+ .++.. + ..+ +++.|+||.+ |++| +||+++ ++
T Consensus 157 -l~~i~~l~~~~~~~-i~D~a~~~----g~~~-~~~~~----~---~~d---i~~~s~sK~~-g~~g--~G~~~~---~~ 213 (382)
T 4eb5_A 157 -VEEISEVLAGKAAL-HIDATASV----GQIE-VDVEK----I---GAD---MLTISSNDIY-GPKG--VGALWI---RK 213 (382)
T ss_dssp -HHHHHHHHTTSSEE-EEECTTTB----TTBC-CCHHH----H---TCS---EEEEETGGGT-CCSS--CEEEEE---ET
T ss_pred -HHHHHHHHHHCCCE-EEEcchhc----CCcc-cCccc----c---CCC---EEEeehHHhc-CCCc--eEEEEE---cc
Confidence 78999999999999 99999983 2211 22222 1 234 7899999986 7666 688887 44
Q ss_pred HH-HHHHHH----hhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Q 009517 371 EV-REQIYK----VAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA 444 (533)
Q Consensus 371 ~~-~~~l~~----~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 444 (533)
+. +..+.. ... ..++++...+.++..+++ .+.+.+++++++++++++++.+.|+++||+.+..+
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 283 (382)
T 4eb5_A 214 EAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAE----------ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGH 283 (382)
T ss_dssp TCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSC
T ss_pred ccccCceecCCCccccccCCCccHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCC
Confidence 32 111100 011 224456666666655553 12234677888899999999999999888888766
Q ss_pred Cc---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC----------------CCCceEEEE
Q 009517 445 EG---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV----------------PGTWHFRCT 505 (533)
Q Consensus 445 ~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~----------------~g~~~iRis 505 (533)
.+ +.++++.++ . . +...++. .|.++||.+.||..|... .+.++|||+
T Consensus 284 ~~~~~~~~~~~~~~--~----------~-~~~~~~~-~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (382)
T 4eb5_A 284 PEKRLPNNVNVRFS--Y----------I-EGESIVL-SLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLT 349 (382)
T ss_dssp SSSBCTTEEEEEET--T----------S-CHHHHHH-HHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEE
T ss_pred cccCCCCEEEEEeC--C----------c-CHHHHHH-HHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEE
Confidence 42 323444343 1 1 2334444 455789999999876421 124599999
Q ss_pred ec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 506 IL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 506 ~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
++ .+++++++++++|+++++++.+
T Consensus 350 ~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 350 LGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 97 6889999999999999988775
No 115
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.98 E-value=7.2e-32 Score=275.21 Aligned_cols=306 Identities=14% Similarity=0.176 Sum_probs=223.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh--cc---CCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--IR---SEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l--~~---~~g 215 (533)
|+.+.+++.+.+.+... ....| +..+..+|++++++++ | . +++|++|+|+++|+..+++.+ .. ++|
T Consensus 46 ~~~v~~a~~~~~~~~~~-~~~~y-~~~~~~~l~~~la~~~----g--~-~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g 116 (375)
T 2eh6_A 46 YPKLTEALKEQVEKLLH-VSNLY-ENPWQEELAHKLVKHF----W--T-EGKVFFANSGTESVEAAIKLARKYWRDKGKN 116 (375)
T ss_dssp CHHHHHHHHHHHHHCSC-CCTTB-CCHHHHHHHHHHHHTS----S--S-CEEEEEESSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhccc-cCccc-CCHHHHHHHHHHHhhc----C--C-CCeEEEeCchHHHHHHHHHHHHHHhccCCCC
Confidence 78899999888865321 12357 4456889999999885 4 3 389999999999999999753 22 467
Q ss_pred -CeEEEcCCcCcchHHHHHHhCCe-------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 009517 216 -DGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (533)
Q Consensus 216 -d~Vlv~~p~~~~~~~~~~~~g~~-------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N 281 (533)
|+|++++|+|+.+...+...+.. +..++. .|+++|++++++ ++++|++++|+|
T Consensus 117 ~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~~ 183 (375)
T 2eh6_A 117 KWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDE------ETAGIIIEVIQG 183 (375)
T ss_dssp CCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCT------TEEEEEECSEET
T ss_pred CCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHHhcC------CeEEEEEeCccC
Confidence 99999999999987766555432 222221 489999998875 799999999999
Q ss_pred CCccC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee
Q 009517 282 PTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (533)
Q Consensus 282 PtG~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri 360 (533)
|||.+ .+.+++++|+++|++||+++|+||+|.+|.+.+. ..++..+ +. .+| +.||||.+ + +|+|+
T Consensus 184 ~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~--~~---~~d-----~~s~SK~~-~-~g~~~ 249 (375)
T 2eh6_A 184 EGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE--FYAYQHF--NL---KPD-----VIALAKGL-G-GGVPI 249 (375)
T ss_dssp TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGG--TC---CCS-----EEEECGGG-G-TTSCC
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--chhhhhc--CC---CCC-----EEEEcccc-c-CCCCe
Confidence 99998 5789999999999999999999999998655432 1122111 11 245 23889999 5 59999
Q ss_pred EEEEEecCCHHHHHHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 361 GYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 361 G~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
||+++ ++++++.+.... ..+++.+++.+.++.++|+ ..+...++++++++++.+.|+++ +.
T Consensus 250 G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~L~~~-~~ 311 (375)
T 2eh6_A 250 GAILA---REEVAQSFTPGSHGSTFGGNPLACRAGTVVVD--------------EVEKLLPHVREVGNYFKEKLKEL-GK 311 (375)
T ss_dssp EEEEE---EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHT-TS
T ss_pred EEEEE---cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 99998 788877765532 2456778888888877763 11256777888899999999887 43
Q ss_pred eEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHH
Q 009517 440 TCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIV 517 (533)
Q Consensus 440 ~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~ 517 (533)
...++. ++++|++++. +...++..+ .++||.+.|+. .+++||++. .+++++++++
T Consensus 312 ~~~~~~-g~~~~~~~~~--------------~~~~~~~~l-~~~gi~~~~~~-------~~~iRi~~~~~~~~~~i~~~~ 368 (375)
T 2eh6_A 312 GKVKGR-GLMLGLELER--------------ECKDYVLKA-LEKGLLINCTA-------GKVLRFLPPLIIQKEHIDRAI 368 (375)
T ss_dssp SEEEEE-TTEEEEECSS--------------CCHHHHHHH-HHTTEECEEET-------TTEEEECCCTTCCHHHHHHHH
T ss_pred CCceEE-EEEEEEEEcC--------------cHHHHHHHH-HHCCCEEecCC-------CCEEEEECCCCCCHHHHHHHH
Confidence 444444 4567765541 123344444 46899999852 238999975 7888999999
Q ss_pred HHHHHH
Q 009517 518 TRLTDF 523 (533)
Q Consensus 518 ~~l~~~ 523 (533)
++|+++
T Consensus 369 ~~l~~~ 374 (375)
T 2eh6_A 369 SVLREI 374 (375)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999875
No 116
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.98 E-value=6.8e-31 Score=269.38 Aligned_cols=325 Identities=11% Similarity=0.031 Sum_probs=231.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE------ 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~------ 214 (533)
++.+++++.+.+.... ..|....|..++++++++++.+.+| .++++|++|+|+++|+..+++.+. .+
T Consensus 43 ~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~-~~~~~~~~ 115 (397)
T 3f9t_A 43 LPITRKIVDIFLETNL----GDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIK-NIWREKRR 115 (397)
T ss_dssp CTHHHHHHHHHTTCCT----TSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHH-HHHHHHHH
T ss_pred cHHHHHHHHHHHhhcC----CCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHH-HHHHhhhh
Confidence 5788888888876532 2222222567777778888877777 567899999999999999999987 45
Q ss_pred -------CCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC
Q 009517 215 -------NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (533)
Q Consensus 215 -------gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~ 287 (533)
||+|+++.|+|+.+...++..|.+++.+++++ ++.+|+++|++++++. ++++|++++|+||||.+.
T Consensus 116 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~ 188 (397)
T 3f9t_A 116 KGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTID 188 (397)
T ss_dssp TTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBC
T ss_pred hcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCC
Confidence 89999999999999999999999999999875 4689999999999873 588999999999999998
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHH--HhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV--SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
+ +++|+++|++||+++|+||+|.++.+........+..+ ...+ .. ...+++.|++|.+ + +|.|+||+++
T Consensus 189 ~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~s~~K~~-~-~~~~~g~~~~ 259 (397)
T 3f9t_A 189 N---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDF---SL-GVDSITIDPHKMG-H-CPIPSGGILF 259 (397)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSG---GG-TCSEEECCTTTTT-C-CCSSCEEEEE
T ss_pred C---HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccc---cc-cCCeEEEcccccc-C-CCCCceEEEE
Confidence 8 88999999999999999999988654221100000000 0000 01 1237789999976 3 5889999988
Q ss_pred ecCCHHHHHHHHHhhhc-c-----------ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 366 TGFSAEVREQIYKVASV-N-----------LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 366 ~~~~~~~~~~l~~~~~~-~-----------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 433 (533)
.++.+.+.+...... . .+.+.+++.++...+. ....+++.++++++++++.+.|
T Consensus 260 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~------------~~~~~~~~~~~~~~~~~l~~~L 325 (397)
T 3f9t_A 260 --KDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG------------REGQRKIVNECMENTLYLYKKL 325 (397)
T ss_dssp --SSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred --eCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 244454443221110 0 1124455555554441 2345667778889999999999
Q ss_pred hcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcC
Q 009517 434 NSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQED 511 (533)
Q Consensus 434 ~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e 511 (533)
+++ |+.++.+..+.++|+.+. ....+. +.|.++||.+.||.. .+++||++. .+++
T Consensus 326 ~~~-g~~~~~~~~~~~~~~~~~---------------~~~~~~-~~l~~~gi~v~~~~~------~~~~Ri~~~~~~~~e 382 (397)
T 3f9t_A 326 KEN-NFKPVIEPILNIVAIEDE---------------DYKEVC-KKLRDRGIYVSVCNC------VKALRIVVMPHIKRE 382 (397)
T ss_dssp HHT-TCCBSSCCSSSEEEEECT---------------THHHHH-HHHHHTTCBCEECSS------SSEEEEECCTTCCHH
T ss_pred HHC-CCEEEcCCCccEEEEEeC---------------CHHHHH-HHHHhCCeEEeccCC------CCEEEEEEcCCCCHH
Confidence 998 887654444445554333 123334 445567999998753 239999997 6889
Q ss_pred cHHHHHHHHHHHHH
Q 009517 512 KIPAIVTRLTDFHK 525 (533)
Q Consensus 512 ~i~~~~~~l~~~l~ 525 (533)
++++++++|+++++
T Consensus 383 ~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 383 HIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998765
No 117
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.98 E-value=1.3e-31 Score=278.84 Aligned_cols=339 Identities=13% Similarity=0.100 Sum_probs=224.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 219 (533)
|+++++++.+++.+... ....| ..+++.++++.+.+.++ .++++|++|+|+++|+..+++.++. ..+++|+
T Consensus 61 ~p~v~~a~~~~~~~~~~-~~~~~-----~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi 132 (433)
T 1zod_A 61 HPEIVSVIGEYAGKLDH-LFSEM-----LSRPVVDLATRLANITP--PGLDRALLLSTGAESNEAAIRMAKLVTGKYEIV 132 (433)
T ss_dssp CHHHHHHHHHHHHHCCC-CCTTC-----CCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhCcc-ccccc-----CCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEE
Confidence 68999999998876311 11122 23455555555555555 4578999999999999999987641 1357999
Q ss_pred EcCCcCcchHHHHHHh--------------CCeEEEEecCCCCCCC--------CCHHHHHHHHHHHHhcCCCeeEEEEe
Q 009517 220 CPIPQYPLYSASIALH--------------GGTLVPYYLDEATGWG--------LETSEVKKQLEAAKAKGITVRALVVI 277 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~--------------g~~~~~v~~~~~~~~~--------ld~~~l~~~i~~~~~~g~~~~~iil~ 277 (533)
+++|+|+++....... |...+.++......|+ +|+++|++++++. ...++++|+++
T Consensus 133 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~ 210 (433)
T 1zod_A 133 GFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAE 210 (433)
T ss_dssp EETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEEC
T ss_pred EECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEc
Confidence 9999999876544432 3333333321111122 4699999999753 11256666554
Q ss_pred CCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC
Q 009517 278 NPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (533)
Q Consensus 278 ~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~ 356 (533)
..+||||. +++++++++|+++|++||+++|+||+|++|.+.+. ...+... .+ .++ +.||||++ |.
T Consensus 211 p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~--~~~~~~~--~~---~~d-----i~s~sK~~-~~- 276 (433)
T 1zod_A 211 PILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT--MFACQRD--GV---TPD-----ILTLSKTL-GA- 276 (433)
T ss_dssp SEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHH--TC---CCS-----EEEECHHH-HT-
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch--HhHHhhc--CC---CCC-----EEEecccc-cC-
Confidence 44689995 67899999999999999999999999999766542 2222111 22 355 45899999 54
Q ss_pred CCeeEEEEEecCCHHHHHHHHHhh--h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 357 GKRGGYMEVTGFSAEVREQIYKVA--S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAF 433 (533)
Q Consensus 357 G~riG~v~~~~~~~~~~~~l~~~~--~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 433 (533)
|+|+||+++ ++++++.+.... . .+++++++++.++.++|+. .+. +.+.++++++++++++.|
T Consensus 277 G~~ig~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~-----------~~~-~~~~~~~~~~~~~l~~~l 341 (433)
T 1zod_A 277 GLPLAAIVT---SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDV-----------VQR-DGLVARANVMGDRLRRGL 341 (433)
T ss_dssp TSSCEEEEE---CHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHH-----------HHH-TTHHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEE---hHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHH-----------HHh-CCHHHHHHHHHHHHHHHH
Confidence 999999998 899998887632 1 5677899999988887741 111 234556666677777776
Q ss_pred hcC----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--c
Q 009517 434 NSL----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--L 507 (533)
Q Consensus 434 ~~~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~ 507 (533)
+++ +.+..+++.|.| +|+++..... ...........++..++ ++||.+.||..|+ . .+++||++ .
T Consensus 342 ~~l~~~~~~~~~~~~~g~~-~~i~~~~~~~----~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~-~--~~~lRi~~~~~ 412 (433)
T 1zod_A 342 LDLMERFDCIGDVRGRGLL-LGVEIVKDRR----TKEPADGLGAKITRECM-NLGLSMNIVQLPG-M--GGVFRIAPPLT 412 (433)
T ss_dssp HHHHHHCTTEEEEEEETTE-EEEEEEEETT----TTEECTTHHHHHHHHHH-HTTEECCEECCTT-S--CCEEEECCCTT
T ss_pred HHHHHhCCCeEEEEEEEEE-EEEEEecCcc----ccCCChHHHHHHHHHHH-HCCCeEeccCCCC-C--CCEEEEECCcC
Confidence 653 455566676654 5655431000 00000011334454544 6899999998775 2 23999986 4
Q ss_pred CCcCcHHHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~~~ 527 (533)
.++++|++++++|+++++++
T Consensus 413 ~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 413 VSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 88999999999999988764
No 118
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.98 E-value=2.4e-30 Score=264.03 Aligned_cols=299 Identities=12% Similarity=0.089 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCC
Q 009517 171 GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEA 247 (533)
Q Consensus 171 ~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~ 247 (533)
.+.+.+++++.+.+|.+ +++++++++|+++++..+++.+ +||+|+++.|+|+++.. .+...|++++.+
T Consensus 58 ~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a~~~~~~~~---~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v----- 128 (374)
T 2aeu_A 58 YFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSAILATILAL---KPKKVIHYLPELPGHPSIERSCKIVNAKYFES----- 128 (374)
T ss_dssp HHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHH---CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-----
T ss_pred HHHHHHHHHHHHHhCCC-CcceEEEEcChHHHHHHHHHhC---CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe-----
Confidence 44566666665556643 3578999999999999999977 79999999998887544 667789998887
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeE-EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccH
Q 009517 248 TGWGLETSEVKKQLEAAKAKGITVRA-LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (533)
Q Consensus 248 ~~~~ld~~~l~~~i~~~~~~g~~~~~-iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~ 326 (533)
.|+++++++ ++ ++++ |++++||||||. +..++++|+++|++||+++|+||+|..+....... .+.
T Consensus 129 ----~d~~~l~~~-~~------~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~ 194 (374)
T 2aeu_A 129 ----DKVGEILNK-ID------KDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQ-PPA 194 (374)
T ss_dssp ----SCHHHHHTT-CC------TTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTC-CCH
T ss_pred ----CCHHHHHhc-CC------CccEEEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccccc-CCc
Confidence 278888876 33 7899 999999999997 77889999999999999999999998753100000 111
Q ss_pred HHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCC
Q 009517 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGD 405 (533)
Q Consensus 327 ~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~ 405 (533)
.. + ..+ +++.|+||++ +|+|+||+++ ++++++.+..... ...+++++.+.++..+|+...
T Consensus 195 ~~----~---~~d---i~~~S~sK~l---~g~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~--- 255 (374)
T 2aeu_A 195 LK----L---GAD---LVVTSTDKLM---EGPRGGLLAG---KKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFN--- 255 (374)
T ss_dssp HH----H---TCS---EEEEETTSSS---SSCSCEEEEE---EHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCC---
T ss_pred cc----c---CCc---EEEecCcccc---cCcceEEEEE---CHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHh---
Confidence 11 1 234 7789999986 3789999998 8899998887665 345678888888888775321
Q ss_pred hhHHHHHHHHHHHHHHHH----HHHHHHHHHHhcC---CCceE-ecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHH
Q 009517 406 ESYESYCAERDGILSSLA----RRAKTLEDAFNSL---EGITC-NKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCR 477 (533)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~---~g~~~-~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (533)
.+.+++..+..+ ++++.+.+.|..+ +|+.+ ..+.|.++.|.++ +... + ..++..++.
T Consensus 256 ------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~--~~~~-~------~~~~~~~~~ 320 (374)
T 2aeu_A 256 ------LERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYK--DDTI-N------IKKLIEIGF 320 (374)
T ss_dssp ------HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEES--SHHH-H------HHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecc--cccc-c------ccchHHHHH
Confidence 011111221111 2256666666664 36665 4566666666432 2210 0 001233566
Q ss_pred HHHHccceEEEcCCCCCCCCCCceEEEEecC---CcCcHHHHHHHHHHHHHHHH
Q 009517 478 RLLNATGIVLVPGSGFGQVPGTWHFRCTILP---QEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 478 ~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~---~~e~i~~~~~~l~~~l~~~~ 528 (533)
++++++||.+.||..|. .+.+++||+++. .+.+++++++.|+++++++.
T Consensus 321 ~ll~~~gV~v~~g~~~~--~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 321 NLLKNYGIITITVAGMP--GASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp HHHHHHCEECSTTSSSC--SSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCEEEecCCCCC--CCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 78888999999998874 234489999962 23347777777777776653
No 119
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.98 E-value=1.3e-30 Score=268.88 Aligned_cols=352 Identities=13% Similarity=0.063 Sum_probs=245.2
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
+.....+...+..+ +|+|+.|.+.. |+.+++++.+++.+.
T Consensus 11 i~~~~~~~~~~~~~---------~i~~~~~~~~~-------------------------------~~~v~~a~~~~~~~~ 50 (407)
T 2dkj_A 11 LFELIALEEKRQRE---------GLELIASENFV-------------------------------SKQVREAVGSVLTNK 50 (407)
T ss_dssp HHHHHHHHHHHHHT---------SEECCTTCCCC-------------------------------CHHHHHHHTSGGGGC
T ss_pred HHHHHHHHHHHhhc---------ceeeccCCCCC-------------------------------CHHHHHHHHhhhhcC
Confidence 55556666655556 89999888653 788999988887642
Q ss_pred CCCCccccCCCc---ccHH--HHHHHH-HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch-
Q 009517 156 PGRATGAYSHSQ---GIKG--LRDTIA-AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY- 228 (533)
Q Consensus 156 ~~~~~~~Y~~~~---G~~~--lr~aia-~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~- 228 (533)
. ...|++.. |.+. ++++++ +.+.+.+| .++++|++++|+ +|+..+++.++ ++||+|++++|+|+.+
T Consensus 51 ~---~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~sGt-~a~~~~~~~~~-~~gd~Vl~~~~~~~~~~ 123 (407)
T 2dkj_A 51 Y---AEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHSGS-QANMAVYMALM-EPGDTLMGMDLAAGGHL 123 (407)
T ss_dssp C---CCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSHH-HHHHHHHHHHC-CTTCEEEEECGGGTCCG
T ss_pred c---ccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecchH-HHHHHHHHHhc-CCCCEEEEecccccCcc
Confidence 1 24565432 4443 444322 34544455 345556667765 59999999997 8999999999999988
Q ss_pred --HHHHHHhCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 009517 229 --SASIALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 229 --~~~~~~~g~--~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~ 304 (533)
...+...|. .++++++++ .++.+|++++++++++. ++++|++++|+|| .+.+ +++|.++|++||+
T Consensus 124 ~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~ 192 (407)
T 2dkj_A 124 THGSRVNFSGKLYKVVSYGVRP-DTELIDLEEVRRLALEH-----RPKVIVAGASAYP--RFWD---FKAFREIADEVGA 192 (407)
T ss_dssp GGTCTTSHHHHHSEEEEECCCT-TTSSCCHHHHHHHHHHH-----CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTC
T ss_pred chHHHHHhcCceEEEEecCCCc-ccCccCHHHHHHHHhhc-----CCeEEEEeccccC--CCCC---HHHHHHHHHHcCC
Confidence 345555566 444444332 36789999999999854 6899999999998 5555 8999999999999
Q ss_pred EEEEcccccc-ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhh-
Q 009517 305 VLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS- 381 (533)
Q Consensus 305 ~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~- 381 (533)
++|+||+|.. +.+.+... +. + + .. .+++.||||++ +|+|+||+++ + +++++.+.....
T Consensus 193 ~li~Dea~~~g~~~~~~~~--~~--~--~----~~---di~~~s~sK~l---~g~~~G~~~~---~~~~~~~~l~~~~~~ 253 (407)
T 2dkj_A 193 YLVVDMAHFAGLVAAGLHP--NP--L--P----YA---HVVTSTTHKTL---RGPRGGLILS---NDPELGKRIDKLIFP 253 (407)
T ss_dssp EEEEECTTTHHHHHTTCSC--CC--T--T----TC---SEEEEESSGGG---CCCSCEEEEE---SCHHHHHHHHHHHTT
T ss_pred EEEEEccccccccccCccC--Cc--c--c----cc---cEEEEeccccC---CCCCceEEEE---CCHHHHHHHHhhhcc
Confidence 9999999987 55544211 10 0 0 12 37899999976 4889999998 7 899988877653
Q ss_pred -ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCceeEEecccCCCHH
Q 009517 382 -VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-AEGAMYLFPRIQLPEK 459 (533)
Q Consensus 382 -~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~ 459 (533)
...++++....++.++++. . ..+++++++++++++++++.+.|+++ |+.+.. +.++.++|+.++..
T Consensus 254 ~~~~~~~~~~~~a~~~al~~-------~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-- 321 (407)
T 2dkj_A 254 GIQGGPLEHVIAGKAVAFFE-------A--LQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPK-- 321 (407)
T ss_dssp TTCSSCCHHHHHHHHHHHHH-------H--HSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG--
T ss_pred cccCCCcHHHHHHHHHHHHH-------H--HHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECccc--
Confidence 2234445444455555521 0 01445778888999999999999998 888875 35677778655410
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC---CCCCceEEEEec------CCcCcHHHHHHHHHHHHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ---VPGTWHFRCTIL------PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---~~g~~~iRis~~------~~~e~i~~~~~~l~~~l~~ 526 (533)
+. +...+. +.|.++||.+.||..|.. ....+++||++. .+++++++++++|++++++
T Consensus 322 --------~~-~~~~~~-~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 322 --------GL-TGKEAE-ERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp --------TC-CHHHHH-HHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred --------CC-CHHHHH-HHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 01 233333 456779999999986510 122348999994 7899999999999999887
No 120
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.98 E-value=1.6e-31 Score=275.65 Aligned_cols=317 Identities=12% Similarity=0.156 Sum_probs=226.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------- 213 (533)
++++++++.+++.+... ....|+ .....++++.+++++ | .++|++|+|+++|+..+++.++ .
T Consensus 57 ~p~v~~a~~~~~~~~~~-~~~~~~-~~~~~~l~~~la~~~----~----~~~v~~~~gg~~a~~~al~~~~-~~~~~~~~ 125 (406)
T 4adb_A 57 HPELREALNEQASKFWH-TGNGYT-NEPVLRLAKKLIDAT----F----ADRVFFCNSGAEANEAALKLAR-KFAHDRYG 125 (406)
T ss_dssp CHHHHHHHHHHHTTCSC-CCTTSC-CHHHHHHHHHHHHHS----S----CSEEEEESSHHHHHHHHHHHHH-HHHHHHTC
T ss_pred CHHHHHHHHHHHHhccc-ccCCcC-CHHHHHHHHHHHhhC----C----CCeEEEeCcHHHHHHHHHHHHH-HHHHhcCC
Confidence 68899999998876322 112232 222455555555553 3 4599999999999999999886 3
Q ss_pred CC-CeEEEcCCcCcchHHHHHHhCC-------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 009517 214 EN-DGILCPIPQYPLYSASIALHGG-------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (533)
Q Consensus 214 ~g-d~Vlv~~p~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p 279 (533)
+| |+|++++|+|+++...+...+. .+..++. .|+++|++++++ ++++|+++ |
T Consensus 126 ~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~-p 191 (406)
T 4adb_A 126 SHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDD------STCAVIVE-P 191 (406)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCST------TEEEEEEC-S
T ss_pred CCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcC------CeEEEEEe-C
Confidence 56 9999999999998766665554 3333332 379999998875 79999888 9
Q ss_pred CCCCccCC--CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 280 GNPTGQVL--AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 280 ~NPtG~~~--s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
+||||.++ +.+++++|+++|++||+++|+||+|.+|.+.+. ..++.. .++ .++ +.||||++ + +|
T Consensus 192 ~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~--~~~---~~d-----~~t~sK~~-~-~G 257 (406)
T 4adb_A 192 IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE--LYAYMH--YGV---TPD-----LLTTAKAL-G-GG 257 (406)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHH--HTC---CCS-----EEEECGGG-G-TT
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hHHHHh--cCC---CCC-----EEEechhh-c-CC
Confidence 99999988 999999999999999999999999998877653 222211 122 345 23789999 6 89
Q ss_pred CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 358 KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 358 ~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
+|+||+++ ++++++.+..... .+++++++++.++.++|+. .+. +.+.++++++++++.+.|+++
T Consensus 258 ~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----------~~~-~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 258 FPVGALLA---TEECARVMTVGTHGTTYGGNPLASAVAGKVLEL-----------INT-PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp SCCEEEEE---CHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHH-----------HSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEE---cHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHH-----------HHh-cCHHHHHHHHHHHHHHHHHHH
Confidence 99999998 9999888776543 6688899999998887741 111 456677777888888887764
Q ss_pred ----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCc
Q 009517 437 ----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQE 510 (533)
Q Consensus 437 ----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~ 510 (533)
+.+....+. ++++|+.+..+. ......++.. |.++||.+.|+. .+++||++ ..++
T Consensus 323 ~~~~~~~~~~~~~-g~~~~~~~~~~~----------~~~~~~~~~~-l~~~gi~v~~~~-------~~~iRi~~~~~~~~ 383 (406)
T 4adb_A 323 NHRYGLFSEVRGL-GLLIGCVLNADY----------AGQAKQISQE-AAKAGVMVLIAG-------GNVVRFAPALNVSE 383 (406)
T ss_dssp HHHHCCEEEEEEE-TTEEEEEECTTT----------TTCHHHHHHH-HHHTTEECEESS-------TTEEEECCCTTCCH
T ss_pred HHhCCCceEEEEE-EEEEEEEEeCCc----------HHHHHHHHHH-HHHCCcEEeecC-------CCeEEEECCCCCCH
Confidence 223323333 445665554210 0123444545 455799999853 33899965 4889
Q ss_pred CcHHHHHHHHHHHHHHHHHH
Q 009517 511 DKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 511 e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++++++++|+++++++.++
T Consensus 384 e~i~~~~~~l~~~l~~~~~~ 403 (406)
T 4adb_A 384 EEVTTGLDRFAAACEHFVSR 403 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987654
No 121
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.98 E-value=9e-31 Score=267.07 Aligned_cols=329 Identities=13% Similarity=0.068 Sum_probs=227.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc---CCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---SENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~~gd~ 217 (533)
|+.+++++.+.+.+........|....+..++.+.+.+.+.+.+| .++++|++|+|+++++..+++.+.. ++||+
T Consensus 13 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~ 90 (382)
T 4hvk_A 13 DERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN--GGGGTVVFTSGATEANNLAIIGYAMRNARKGKH 90 (382)
T ss_dssp CHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTT--CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcC--CCcCeEEEECCchHHHHHHHHHhhhhhcCCCCE
Confidence 788999999888753221111222222233444444444444445 5678899999999999999998852 48999
Q ss_pred EEEcCCcCcchHHHHHH---hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 218 ILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
|+++.|+|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+++ +++
T Consensus 91 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~ 159 (382)
T 4hvk_A 91 ILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEE 159 (382)
T ss_dssp EEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHH
T ss_pred EEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhcc------CceEEEEECCCCCceeeCC---HHH
Confidence 99999999998776555 599999999874 458999999999976 7999999999999999999 889
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
|+++|++||+ +|+|++|..... ..++.. . ..+ +++.|+||.+ |++| +|++++ +++.
T Consensus 160 i~~l~~~~~~-li~D~a~~~~~~-----~~~~~~----~---~~d---~~~~s~~K~~-g~~g--~g~~~~---~~~~-- 215 (382)
T 4hvk_A 160 ISEVLAGKAA-LHIDATASVGQI-----EVDVEK----I---GAD---MLTISSNDIY-GPKG--VGALWI---RKEA-- 215 (382)
T ss_dssp HHHHHSSSSE-EEEECTTTBTTB-----CCCHHH----H---TCS---EEEEESGGGT-SCTT--CEEEEE---ETTC--
T ss_pred HHHHHHHcCE-EEEEhHHhcCCC-----CCCchh----c---CCC---EEEEeHHHhc-CCCc--eEEEEE---cCcc--
Confidence 9999999999 999999874211 112211 1 233 7899999976 6666 566665 3322
Q ss_pred HHHHhh-------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Q 009517 375 QIYKVA-------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEG 446 (533)
Q Consensus 375 ~l~~~~-------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g 446 (533)
.+.... . ...+++...+.++..++. ...+.+++++++++++++++.+.|+++||+.+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 285 (382)
T 4hvk_A 216 KLQPVILGGGQENGLRSGSENVPSIVGFGKAAE----------ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPE 285 (382)
T ss_dssp CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSS
T ss_pred CcCcccccCCCcCccccCCcCHHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcc
Confidence 111111 0 134456666666666552 1234567888899999999999999988988876653
Q ss_pred ---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCC----------------CceEEEEec
Q 009517 447 ---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPG----------------TWHFRCTIL 507 (533)
Q Consensus 447 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g----------------~~~iRis~~ 507 (533)
+.++++.++ . . +...+. +.|.++||.+.+|..|+.... .++|||+++
T Consensus 286 ~~~~~~~~~~~~--~----------~-~~~~~~-~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~ 351 (382)
T 4hvk_A 286 KRLPNNVNVRFS--Y----------I-EGESIV-LSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLG 351 (382)
T ss_dssp SBCTTEEEEEET--T----------C-CHHHHH-HHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECC
T ss_pred ccCCCEEEEEEC--C----------C-CHHHHH-HHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcC
Confidence 223333332 1 1 233333 556678999999988763210 459999997
Q ss_pred --CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
.+++++++++++|+++++++.+.
T Consensus 352 ~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 352 RYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 67889999999999999987653
No 122
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.98 E-value=3.4e-31 Score=268.75 Aligned_cols=319 Identities=13% Similarity=0.086 Sum_probs=231.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC--CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~V 218 (533)
|+++++++.+.+. +.|+. ..+..++|++++++++ .+.++++|++|+|+++|+..+++.++ .+||+|
T Consensus 16 ~~~v~~a~~~~~~-------~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~v 83 (366)
T 1m32_A 16 SRTVKEAMLFDSC-------TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAVEAVLGSAL-GPQDKV 83 (366)
T ss_dssp CHHHHHTTCCCCC-------TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHHHHHHHHSC-CTTCCE
T ss_pred CHHHHHHHhhhhc-------CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHHHHHHHHhc-CCCCeE
Confidence 6778877655321 11221 1568999999999984 12234689999999999999999998 799998
Q ss_pred EEcC-CcCcc-hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 219 LCPI-PQYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 219 lv~~-p~~~~-~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
++++ ++|+. +...+...|.+++.++++. ++.+|+++|++++++. +++++|++++|+||||.+++ +++|+
T Consensus 84 i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~~---l~~i~ 154 (366)
T 1m32_A 84 LIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNAD----PTISHIAMVHSETTTGMLNP---IDEVG 154 (366)
T ss_dssp EEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHC----TTCCEEEEESEETTTTEECC---HHHHH
T ss_pred EEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcC----CCeEEEEEecccCCcceecC---HHHHH
Confidence 8776 56654 6677788899999999864 4569999999999861 24789999999999999999 88999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+||+|..... + .++ ..+ ..+ +++.|+||+++| +.++||+++ ++++++.+
T Consensus 155 ~l~~~~~~~li~Dea~~~~~~----~-~~~----~~~---~~d---i~~~s~~K~~~~--~~g~G~~~~---~~~~~~~~ 214 (366)
T 1m32_A 155 ALAHRYGKTYIVDAMSSFGGI----P-MDI----AAL---HID---YLISSANKCIQG--VPGFAFVIA---REQKLAAC 214 (366)
T ss_dssp HHHHHHTCEEEEECTTTTTTS----C-CCT----TTT---TCS---EEEEESSSTTCC--CSSEEEEEE---EHHHHTTC
T ss_pred HHHHHcCCEEEEECCccccCc----C-ccc----ccc---Ccc---EEEecCcccccC--CCceEEEEE---CHHHHHhh
Confidence 999999999999999985322 1 111 111 233 889999998744 345799998 88877655
Q ss_pred HHhh------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHhc
Q 009517 377 YKVA------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 377 ~~~~------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~ 435 (533)
.... . ..++++..++.++.++++ .+.++ +++++++++++++++.+.|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~~~~~~l~~~L~~ 284 (366)
T 1m32_A 215 KGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALK----------ELAKEGGVAARHQRYQQNQRSLVAGMRA 284 (366)
T ss_dssp TTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH----------HHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHH----------HHHHccCHhHHHHHHHHHHHHHHHHHHH
Confidence 3310 0 124667777777777663 12233 467888899999999999999
Q ss_pred CCCceEecC---CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCc
Q 009517 436 LEGITCNKA---EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQE 510 (533)
Q Consensus 436 ~~g~~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~ 510 (533)
+ |+.+..+ .+++++|+.++...+ . +...+... |.++||.+.||..|+ .+++||+++ .++
T Consensus 285 ~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~-l~~~gi~v~~~~~~~----~~~iRi~~~~~~~~ 348 (366)
T 1m32_A 285 L-GFNTLLDDELHSPIITAFYSPEDPQ---------Y-RFSEFYRR-LKEQGFVIYPGKVSQ----SDCFRIGNIGEVYA 348 (366)
T ss_dssp T-TCCBSSCGGGBCSSEEEEECCCCTT---------C-CHHHHHHH-HHHTTEECEECCCSS----SCEEEEECCSSCCH
T ss_pred C-CCeeccCchhcCceEEEEEcCccCC---------C-CHHHHHHH-HHHCCEEEECCcCCC----CCEEEEecCCCCCH
Confidence 8 8877654 467677865541000 1 23444444 456799999998773 238999997 578
Q ss_pred CcHHHHHHHHHHHHHH
Q 009517 511 DKIPAIVTRLTDFHKN 526 (533)
Q Consensus 511 e~i~~~~~~l~~~l~~ 526 (533)
+++++++++|++++++
T Consensus 349 ~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 349 ADITALLTAIRTAMYW 364 (366)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8999999999987653
No 123
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.98 E-value=3.7e-31 Score=271.23 Aligned_cols=323 Identities=10% Similarity=0.059 Sum_probs=231.7
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCccccCC--CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC
Q 009517 137 QGLFSADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~ 214 (533)
|..+|+.+++++.+.+.. .|.+ .....++++.+++++ |.+ ..++|++|+|+++++..+++.+. ++
T Consensus 31 p~~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~gg~~al~~~~~~~~-~~ 97 (393)
T 3kgw_A 31 PSNLAPRVLAAGSLRMIG-------HMQKEMLQIMEEIKQGIQYVF----QTR-NPLTLVVSGSGHCAMETALFNLL-EP 97 (393)
T ss_dssp CCCCCHHHHHHTTCCCCC-------TTSHHHHHHHHHHHHHHHHHH----TCC-CSEEEEESCCTTTHHHHHHHHHC-CT
T ss_pred CCCCCHHHHHHhcccccC-------cccHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEeCCcHHHHHHHHHhcC-CC
Confidence 334478887776543221 1221 223456666666665 422 23469999999999999999998 89
Q ss_pred CCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 215 NDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 215 gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
||+|+++.++|.+ +...+...|.+++.++++.. +.+|+++|++++++. ++++|++++|+||||.+++ +
T Consensus 98 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l 167 (393)
T 3kgw_A 98 GDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQH-----KPVLLFLVHGESSTGVVQP---L 167 (393)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---C
T ss_pred CCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhC-----CCcEEEEeccCCcchhhcc---H
Confidence 9999999988853 36677888999999998754 478999999999875 7899999999999999998 8
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
++|.++|++||+++|+||+|..... + ..+ ......+++.|+||+++|++ ++||+++ ++++
T Consensus 168 ~~i~~l~~~~~~~li~De~~~~g~~----~-~~~----------~~~~~d~~~~s~sK~~~~~~--g~g~~~~---~~~~ 227 (393)
T 3kgw_A 168 DGFGELCHRYQCLLLVDSVASLGGV----P-IYM----------DQQGIDIMYSSSQKVLNAPP--GISLISF---NDKA 227 (393)
T ss_dssp TTHHHHHHHTTCEEEEECTTTTTTS----C-CCT----------TTTTCCEEEEESSSTTCCCS--SCEEEEE---CHHH
T ss_pred HHHHHHHHHcCCEEEEECCccccCc----c-cch----------hhcCCCEEEecCcccccCCC--ceeEEEE---CHHH
Confidence 8999999999999999999873211 1 110 01112377889999885544 4899998 9999
Q ss_pred HHHHHHhhh------------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHHHHH
Q 009517 373 REQIYKVAS------------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLARRAK 427 (533)
Q Consensus 373 ~~~l~~~~~------------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 427 (533)
++.+..... ..++++..++.++..+++ ...+ .++++.++++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~ 297 (393)
T 3kgw_A 228 KYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLA----------LIAEQGLENCWRRHREATA 297 (393)
T ss_dssp HHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHH----------HHHHhhHHHHHHHHHHHHH
Confidence 888865321 123456777766666653 1112 25778888999999
Q ss_pred HHHHHHhcCCCceEecCC----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEE
Q 009517 428 TLEDAFNSLEGITCNKAE----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFR 503 (533)
Q Consensus 428 ~l~~~L~~~~g~~~~~~~----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iR 503 (533)
++.+.|+++ |+.+..+. .++++|+.++ .+ .+...+...+++++||.+.||..+. +.++||
T Consensus 298 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iR 361 (393)
T 3kgw_A 298 HLHKHLQEM-GLKFFVKDPEIRLPTITTVTVP--AG----------YNWRDIVSYVLDHFSIEISGGLGPT---EERVLR 361 (393)
T ss_dssp HHHHHHHHT-TCCBSSSSGGGBCSSEEEEECC--TT----------BCHHHHHHHHHHHHCEECBCCCGGG---TTTEEE
T ss_pred HHHHHHHHc-CCeeccCChhhcCCeEEEEeCC--CC----------CCHHHHHHHHHHhCCEEEeCCcccC---CCCEEE
Confidence 999999998 88776443 2455554432 11 1234555566665599999988653 233999
Q ss_pred EEe-c--CCcCcHHHHHHHHHHHHHHHH
Q 009517 504 CTI-L--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 504 is~-~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
|++ + .+++++++++++|+++++++.
T Consensus 362 i~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 362 IGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp EECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred EEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 998 6 488999999999999988754
No 124
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.98 E-value=5.3e-31 Score=273.25 Aligned_cols=325 Identities=14% Similarity=0.134 Sum_probs=230.1
Q ss_pred CHHHHHHHHHHHh--cCCCCC-----ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-
Q 009517 141 SADSIERAWQILD--QIPGRA-----TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~--~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~- 212 (533)
|+.+++++.+++. +..... ...|....+..++++.++++++ .++++|++|+|+++|+..+++++..
T Consensus 35 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~v~~~~ggt~a~~~a~~~l~~~ 108 (423)
T 3lvm_A 35 DPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG------ADPREIVFTSGATESDNLAIKGAANF 108 (423)
T ss_dssp CHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEEESSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCChHHHHHHHHHHHHHh
Confidence 7888888887776 321100 0011112334667777777664 5678999999999999999998861
Q ss_pred --CCCCeEEEcCCcCcchHHHHHH---hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCC
Q 009517 213 --SENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (533)
Q Consensus 213 --~~gd~Vlv~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~ 287 (533)
.+||+|+++.|+|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.++
T Consensus 109 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~ 180 (423)
T 3lvm_A 109 YQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD------DTILVSIMHVNNEIGVVQ 180 (423)
T ss_dssp HTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT------TEEEEECCSBCTTTCBBC
T ss_pred hccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC------CcEEEEEeCCCCCCcccc
Confidence 2799999999999998877744 499999999875 568899999999976 799999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
+ +++|+++|++||++||+||+|..... + .+. ..+ ..+ +++.||||.+ |++| +||+++
T Consensus 181 ~---l~~i~~l~~~~~~~li~Dea~~~~~~----~-~~~----~~~---~~d---i~~~s~sK~~-g~~g--~G~~~~-- 237 (423)
T 3lvm_A 181 D---IAAIGEMCRARGIIYHVDATQSVGKL----P-IDL----SQL---KVD---LMSFSGHKIY-GPKG--IGALYV-- 237 (423)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTTTTTS----C-CCT----TTS---CCS---EEEEESTTTT-SCSS--CEEEEE--
T ss_pred C---HHHHHHHHHHcCCEEEEEhhhhcCCC----C-cCh----hhc---CCC---EEEechHHhc-CCCC--eEEEEE--
Confidence 9 88899999999999999999875221 1 111 111 233 7899999976 6566 899988
Q ss_pred CCHHHHHHHHHhh--------hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 368 FSAEVREQIYKVA--------SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 368 ~~~~~~~~l~~~~--------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
++++++.+.... ....+++...+.++..++. ...+++++++++++++++++.+.|++++|+
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 306 (423)
T 3lvm_A 238 -RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYR----------IAKEEMATEMERLRGLRNRLWNGIKDIEEV 306 (423)
T ss_dssp -CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred -eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 665554443321 1234556666666655553 122346788889999999999999999899
Q ss_pred eEecCCc---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC----------------CCc
Q 009517 440 TCNKAEG---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP----------------GTW 500 (533)
Q Consensus 440 ~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~----------------g~~ 500 (533)
.+..+.+ +.++++.+.. . +...+. +.|.+ |.+.+|..|.... ..+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~------------~-~~~~l~-~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (423)
T 3lvm_A 307 YLNGDLEHGAPNILNVSFNY------------V-EGESLI-MALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHS 370 (423)
T ss_dssp EEESCSTTBCTTEEEEEETT------------S-CHHHHH-HHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHT
T ss_pred EEeCCccccCCCeEEEEeCC------------C-CHHHHH-HHHhh--heeccCccccCCCccccHHHHHhCCCccccCc
Confidence 8887653 1122222321 1 233333 44554 9999998765210 035
Q ss_pred eEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 501 HFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 501 ~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
+|||++. .+++++++++++|+++++++.+
T Consensus 371 ~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 371 SIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 8999996 6778999999999999988753
No 125
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.98 E-value=9.6e-31 Score=264.03 Aligned_cols=316 Identities=14% Similarity=0.062 Sum_probs=231.5
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccC-CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeE
Q 009517 140 FSADSIERAWQILDQIPGRATGAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~V 218 (533)
.|+.+++++.+.+.. +.|+ ...+..++|+++++++ |.+.++++|++|+|+++|+..+++.+. + |+|
T Consensus 11 ~~~~v~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~-~--d~v 77 (353)
T 2yrr_A 11 IPERVQKALLRPMRG------HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLD-R--GPV 77 (353)
T ss_dssp CCHHHHGGGGSCCCC------TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCS-C--CCE
T ss_pred CCHHHHHHHhccccc------ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhc-C--CcE
Confidence 378888777655432 1222 2345678888888886 433346789999999999999999987 4 899
Q ss_pred EEcCCcCcch--HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 219 LCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 219 lv~~p~~~~~--~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
++++|+|+++ ...++..|.+++.+++++ ++.+|+++|++++++. ++++|++++|+||||.+++ +++|.
T Consensus 78 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~ 147 (353)
T 2yrr_A 78 LVLVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNP---AEAIG 147 (353)
T ss_dssp EEEECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECC---HHHHH
T ss_pred EEEcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecC---HHHHH
Confidence 9999998875 455677899999999875 4579999999999862 5889999999999999998 78999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+||+|.. +..+ .++.. + ..+ +++.|++|++.|++| +||+++ ++++++.+
T Consensus 148 ~l~~~~~~~li~D~a~~~----~~~~-~~~~~----~---~~d---~~~~s~~K~~~~~~g--~G~~~~---~~~~~~~l 207 (353)
T 2yrr_A 148 ALAKEAGALFFLDAVTTL----GMLP-FSMRA----M---GVD---YAFTGSQKCLSAPPG--LAPIAA---SLEARKAF 207 (353)
T ss_dssp HHHHHHTCEEEEECTTTT----TTSC-CCHHH----H---TCS---EEECCTTSTTCCCSS--CEEEEE---CHHHHHHC
T ss_pred HHHHHcCCeEEEEcCccc----cccc-ccccc----c---Cce---EEEecCcccccCCCc--eEEEEE---CHHHHHHh
Confidence 999999999999999953 2111 23222 2 234 778899997756566 699998 88888765
Q ss_pred H-------------Hhh--h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 377 Y-------------KVA--S-VNLCSNISGQILASLVMSPPKVGDESYESYCAE-RDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 377 ~-------------~~~--~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
. ... . ..++++...+.++.++++ .+.++ +++++++++++++++.+.|+++ |+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 276 (353)
T 2yrr_A 208 TGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALD----------LVLEEGVAARERRAREVYAWVLEELKAR-GF 276 (353)
T ss_dssp CCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred ccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHH----------HHHHhhHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 4 111 1 234567777776666653 12223 5678888999999999999998 88
Q ss_pred eEecCC--ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c-CCcCcHH-
Q 009517 440 TCNKAE--GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L-PQEDKIP- 514 (533)
Q Consensus 440 ~~~~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~-~~~e~i~- 514 (533)
++..+. +++++|+.++ .+ . +...+... |.++||.+.||..|.. . +++||++ . .++++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~--~~---------~-~~~~~~~~-l~~~gi~v~~g~~~~~-~--~~iRi~~~~~~~~~~~~~ 340 (353)
T 2yrr_A 277 RPYPKASPLPTVLVVRPP--EG---------V-DADRLVRA-LYAEGVAVAGGIGPTR-G--QVLRLGLMGEGARREAYQ 340 (353)
T ss_dssp EESCSSSBCTTEEEEECC--TT---------C-CHHHHHHH-HHHTTEECEECCGGGT-T--TCEEEECSGGGSCHHHHH
T ss_pred ccccCccCCCeEEEEECC--CC---------C-CHHHHHHH-HHHCCEEEeCCccccC-C--CeEEEecCccCCHHHHHH
Confidence 887664 5666665543 11 1 23444444 5557999999987752 2 3899999 3 7888898
Q ss_pred HHHHHHHHHHH
Q 009517 515 AIVTRLTDFHK 525 (533)
Q Consensus 515 ~~~~~l~~~l~ 525 (533)
+++++|+++++
T Consensus 341 ~~~~~l~~~l~ 351 (353)
T 2yrr_A 341 AFLKALDRALA 351 (353)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 126
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.97 E-value=1e-30 Score=275.02 Aligned_cols=337 Identities=16% Similarity=0.115 Sum_probs=237.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~ 214 (533)
|+++++++.+++.+. .+ |....+..+++.++++++.+.++ ...++|++++|+++|++.+++.++.. +
T Consensus 72 ~p~v~~A~~~~l~~~----~~-~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~ 144 (476)
T 3i5t_A 72 RREIVDAMAHQAMVL----PY-ASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRP 144 (476)
T ss_dssp CHHHHHHHHHHHHHC----CC-CCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc----cC-cccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999999872 12 22224567888899999988765 34679999999999999999998621 3
Q ss_pred -CCeEEEcCCcCcchHHHHHHhCCe-------------EEEEe--cCCCCCCCCC--------HHHHHHHHHHHHhcCCC
Q 009517 215 -NDGILCPIPQYPLYSASIALHGGT-------------LVPYY--LDEATGWGLE--------TSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 215 -gd~Vlv~~p~~~~~~~~~~~~g~~-------------~~~v~--~~~~~~~~ld--------~~~l~~~i~~~~~~g~~ 270 (533)
+++|++.+|+|+++.......+.. +..++ ..... +..| +++|++.++... ..+
T Consensus 145 ~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~le~~i~~~~--~~~ 221 (476)
T 3i5t_A 145 QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDDLVQEFEDRIESLG--PDT 221 (476)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHHHHHHHHHHHHHHC--GGG
T ss_pred CCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHHHHHHHHHHHHhcC--CCC
Confidence 479999999999988766655432 12222 21111 1223 788998887531 126
Q ss_pred eeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCC
Q 009517 271 VRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (533)
Q Consensus 271 ~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 349 (533)
+++|+++.++|++|. +++++++++|+++|++||+++|+||+|++|.+.|. ...+.. ..+..+| +.+||
T Consensus 222 ~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~--~~~~~~----~~~v~pd-----i~t~s 290 (476)
T 3i5t_A 222 IAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGE--WFASEK----VFGVVPD-----IITFA 290 (476)
T ss_dssp EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHHH----TTCCCCS-----EEEEC
T ss_pred EEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccC--ceeeec----ccCCCcc-----hhhhh
Confidence 788888888889986 88999999999999999999999999999877653 222210 1122566 44789
Q ss_pred ccCCCCCC-CeeEEEEEecCCHHHHHHHHHh--------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHH
Q 009517 350 KGYYGECG-KRGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (533)
Q Consensus 350 K~~~gl~G-~riG~v~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~ 420 (533)
|++ | .| +|+||+++ ++++++.+.+. ...+++.++++++++.++|+ ..+. +.+.+
T Consensus 291 K~l-~-~G~~plg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~-----------~~~~-~~~~~ 353 (476)
T 3i5t_A 291 KGV-T-SGYVPLGGLAI---SEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIE-----------LMER-EGIVD 353 (476)
T ss_dssp GGG-G-TTSSCCEEEEE---CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHH-----------HHHH-TTHHH
T ss_pred hhh-c-CCCcCeEEEEE---CHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHH-----------HHHh-HHHHH
Confidence 999 4 38 99999998 99999988753 23678899999999998874 1111 34566
Q ss_pred HHHHHHHHHHHHHhcC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCC----ChHHHHHHHHHccceEEEcCCCC
Q 009517 421 SLARRAKTLEDAFNSL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV----PDAFYCRRLLNATGIVLVPGSGF 493 (533)
Q Consensus 421 ~~~~~~~~l~~~L~~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gV~v~pg~~f 493 (533)
+++++.+++++.|+++ |.+..+++.|.|+.+ .+...... ..... ....++.. |.++||.+.|.
T Consensus 354 ~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i-~~~~~~~~-----~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~--- 423 (476)
T 3i5t_A 354 QAREMADYFAAALASLRDLPGVAETRSVGLVGCV-QCLLDPTR-----ADGTAEDKAFTLKIDER-CFELGLIVRPL--- 423 (476)
T ss_dssp HHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEE-EECCC----------CCHHHHHHHHHHHHH-HHHTTEECEEE---
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEE-EEecCccc-----cccccchhHHHHHHHHH-HHHCCCEEEec---
Confidence 6777777777777764 567778888876543 33311100 00000 02234444 45679999982
Q ss_pred CCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 494 GQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 494 ~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+ +++||++ ..++++|++++++|+++++++.++
T Consensus 424 g-----~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 424 G-----DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp T-----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1 3899995 589999999999999999987654
No 127
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.97 E-value=8.6e-31 Score=272.42 Aligned_cols=326 Identities=14% Similarity=0.123 Sum_probs=224.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--C----C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--S----E 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~----~ 214 (533)
|+++++++.+++..........|+.. ...++++++++++ + .++++|++|+|+++|+..+++.+.. . +
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~~~~~~-~~~~l~~~la~~~----~--~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~ 133 (429)
T 1s0a_A 61 HPQLNAAMKSQIDAMSHVMFGGITHA-PAIELCRKLVAMT----P--QPLECVFLADSGSVAVEVAMKMALQYWQAKGEA 133 (429)
T ss_dssp CHHHHHHHHHHHHHCSCCCCSSEECH-HHHHHHHHHHHHS----C--TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHhcccccccccCCH-HHHHHHHHHHHhC----C--CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCC
Confidence 68999999998876321011234332 2355666666554 4 4678999999999999999987531 1 5
Q ss_pred CCeEEEcCCcCcchHHHHHHh-C-------------CeEEEEecCC---CCCC-CCCHHHHHHHHHHHHhcCCCeeEEEE
Q 009517 215 NDGILCPIPQYPLYSASIALH-G-------------GTLVPYYLDE---ATGW-GLETSEVKKQLEAAKAKGITVRALVV 276 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~~~~-g-------------~~~~~v~~~~---~~~~-~ld~~~l~~~i~~~~~~g~~~~~iil 276 (533)
|++|++++|+|+++...+... | ..+..++... ...| .+|+++|++++++. ..++++|++
T Consensus 134 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~ 210 (429)
T 1s0a_A 134 RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAVII 210 (429)
T ss_dssp CCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEEEE
T ss_pred CCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEEEEE
Confidence 899999999999875544322 1 1233444431 1134 48999999999752 125666665
Q ss_pred eCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCC
Q 009517 277 INP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYG 354 (533)
Q Consensus 277 ~~p-~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~g 354 (533)
+.. +||||. +++++++++|+++|++||+++|+||+|.+|.+.+. ...+.. ..+ .+| +.||||.+ +
T Consensus 211 ~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~--~~~~~~--~~~---~~d-----~~t~sK~l-~ 277 (429)
T 1s0a_A 211 EPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK--LFACEH--AEI---APD-----ILCLGKAL-T 277 (429)
T ss_dssp CSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEEECGGG-G
T ss_pred eecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch--HHHhhh--cCC---CCC-----EEEecccc-c
Confidence 555 799995 66888999999999999999999999998765442 112111 112 355 34799998 5
Q ss_pred CCC-CeeEEEEEecCCHHHHHHHHHh------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 009517 355 ECG-KRGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (533)
Q Consensus 355 l~G-~riG~v~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (533)
+| +|+||+++ ++++++.+... ...+++++++++.++.++|+ ..+. +.+.++++++++
T Consensus 278 -~G~~~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~-----------~~~~-~~~~~~~~~~~~ 341 (429)
T 1s0a_A 278 -GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLA-----------ILES-GDWQQQVADIEV 341 (429)
T ss_dssp -TSSSCCEEEEE---CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH-----------HHHT-CHHHHHHHHHHH
T ss_pred -CCCccceEEEe---CHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHHHH
Confidence 48 99999998 88998888763 22567789999999888874 1111 235566777888
Q ss_pred HHHHHHhcC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEE
Q 009517 428 TLEDAFNSL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRC 504 (533)
Q Consensus 428 ~l~~~L~~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRi 504 (533)
++.+.|+++ |++..+++.|. ++|++++.+ .+...++..++ ++||.+.|+ + +++||
T Consensus 342 ~l~~~L~~l~~~~~~~~~~~~g~-~~~~~~~~~------------~~~~~l~~~l~-~~Gi~v~~~---~-----~~iRi 399 (429)
T 1s0a_A 342 QLREQLAPARDAEMVADVRVLGA-IGVVETTHP------------VNMAALQKFFV-EQGVWIRPF---G-----KLIYL 399 (429)
T ss_dssp HHHHHHGGGGGCTTEEEEEEETT-EEEEEESSC------------BCHHHHHHHHH-HTTEECCCB---T-----TEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEeeE-EEEEEECCc------------ccHHHHHHHHH-HCCCEEecc---C-----CEEEE
Confidence 888888875 56666666665 567555421 12334444544 689999873 1 38999
Q ss_pred Ee--cCCcCcHHHHHHHHHHHHHHH
Q 009517 505 TI--LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 505 s~--~~~~e~i~~~~~~l~~~l~~~ 527 (533)
++ ..+++++++++++|+++++++
T Consensus 400 s~~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 400 MPPYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 96 488999999999999887543
No 128
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.97 E-value=6e-31 Score=272.77 Aligned_cols=315 Identities=11% Similarity=0.087 Sum_probs=223.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------- 213 (533)
++++++++.+++.+... +.. .+..++++++++.+.+.+| .++|++|+|+++|+..+++.++ .
T Consensus 75 ~p~v~~ai~~~~~~~~~-----~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA~~~al~~~~-~~~~~~~~ 143 (420)
T 2pb2_A 75 HPALVEALKSQGETLWH-----TSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEANETAFKLAR-HYACVRHS 143 (420)
T ss_dssp CHHHHHHHHHHHTTCCC-----CCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHHHHHHHHHHH-HHHHHHTC
T ss_pred CHHHHHHHHHHHHhccc-----ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHHHHHHHHHHH-HHhhhccC
Confidence 68999999998876321 111 1123455556666655544 5799999999999999999886 4
Q ss_pred CC-CeEEEcCCcCcchHHH-HHHhCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 009517 214 EN-DGILCPIPQYPLYSAS-IALHGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (533)
Q Consensus 214 ~g-d~Vlv~~p~~~~~~~~-~~~~g~~------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p 279 (533)
+| ++|++++|+|+++... +...|.+ +..++. .|+++|++++++ ++++|+++++
T Consensus 144 ~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~------~~~~vi~~p~ 210 (420)
T 2pb2_A 144 PFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDD------HTCAVVVEPI 210 (420)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCT------TEEEEEECSE
T ss_pred CCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhcc------CceEEEEeCC
Confidence 67 5999999999987544 4444543 444443 279999999875 7999999888
Q ss_pred CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC
Q 009517 280 GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (533)
Q Consensus 280 ~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ 358 (533)
+|++|+ +++.+++++|+++|++||+++|+||+|.++.+.|. ..++.. .++ .+| +.||||.+ | +|+
T Consensus 211 ~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~--~~~~~~--~~~---~~d-----iit~sK~l-~-~G~ 276 (420)
T 2pb2_A 211 QGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD--LFAYMH--YGV---TPD-----ILTSAKAL-G-GGF 276 (420)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHH--HTC---CCS-----EEEECGGG-G-TTS
T ss_pred cCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc--HHHHHh--cCC---CCC-----eEEecccc-c-CCC
Confidence 998884 69999999999999999999999999998776553 222111 122 356 22789999 6 799
Q ss_pred eeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Q 009517 359 RGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL- 436 (533)
Q Consensus 359 riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 436 (533)
|+||+++ ++++++.+..... .++++++++++++.++|+.. +. +.+.++++++++++.+.|+++
T Consensus 277 ~iG~~~~---~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~-----------~~-~~~~~~~~~~~~~l~~~L~~~~ 341 (420)
T 2pb2_A 277 PVSAMLT---TQEIASAFHVGSHGSTYGGNPLACAVAGAAFDII-----------NT-PEVLQGIHTKRQQFVQHLQAID 341 (420)
T ss_dssp CCEEEEE---CHHHHTTCC----CCEECCCHHHHHHHHHHHHHH-----------SS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEE---hHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHH-----------Hh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 8888776655322 56788999999988877421 11 345667777788888877664
Q ss_pred ---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcC
Q 009517 437 ---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQED 511 (533)
Q Consensus 437 ---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e 511 (533)
+.+..+++.|.| +|+.+..+. + .+...++..+ .++||.+.|+. .+++||++ ..+++
T Consensus 342 ~~~~~~~~~~~~g~~-~~v~~~~~~---------~-~~~~~l~~~l-~~~Gi~v~~~~-------~~~iRl~~~~~~t~e 402 (420)
T 2pb2_A 342 EQFDIFSDIRGMGLL-IGAELKPKY---------K-GRARDFLYAG-AEAGVMVLNAG-------ADVMRFAPSLVVEEA 402 (420)
T ss_dssp HHHCCEEEEEEETTE-EEEEECGGG---------T-TCHHHHHHHH-HHTTEECEESS-------TTEEEECCCTTCCHH
T ss_pred hcCCCeEEEEecceE-EEEEECCCc---------h-HHHHHHHHHH-HHCCCEEEeCC-------CCEEEEECCCCCCHH
Confidence 445556666654 554443110 0 0234444454 45899999863 23899996 48899
Q ss_pred cHHHHHHHHHHHHHHH
Q 009517 512 KIPAIVTRLTDFHKNF 527 (533)
Q Consensus 512 ~i~~~~~~l~~~l~~~ 527 (533)
++++++++|+++++++
T Consensus 403 ei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 403 DIHEGMQRFAQAVGKV 418 (420)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
No 129
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.97 E-value=9.2e-31 Score=274.92 Aligned_cols=338 Identities=15% Similarity=0.127 Sum_probs=233.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-------C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------S 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------~ 213 (533)
|+++++++.+++.+. ...|....+..+.+.++++.+.+..+ ...++|++++|+++|++.+++.++. .
T Consensus 73 ~p~v~~A~~~~~~~~----~~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~ 146 (472)
T 3hmu_A 73 RDELAEVAARQMREL----PYYNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQP 146 (472)
T ss_dssp CHHHHHHHHHHHHHC----SCCCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc----cccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 689999999999873 22344444455667777777776654 4567999999999999999999872 1
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCC------------eEEEEecCC--C-CCCCCC--------HHHHHHHHHHHHhcCCC
Q 009517 214 ENDGILCPIPQYPLYSASIALHGG------------TLVPYYLDE--A-TGWGLE--------TSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~------------~~~~v~~~~--~-~~~~ld--------~~~l~~~i~~~~~~g~~ 270 (533)
++++|++.+|+|+++.......+. .+..++... . +++ .| +++|++.|+.... .+
T Consensus 147 ~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~--~~ 223 (472)
T 3hmu_A 147 EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE--NR 223 (472)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GG
T ss_pred CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC--CC
Confidence 358999999999998877666544 233444221 0 111 34 7888888875310 15
Q ss_pred eeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCC
Q 009517 271 VRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (533)
Q Consensus 271 ~~~iil~~p~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 349 (533)
+++|+++.++|++|.+. +++.+++|+++|++||+++|+||+|++|.+.|. ...+.. .++ .+| +.+||
T Consensus 224 ~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~--~~a~~~--~~v---~pd-----i~t~s 291 (472)
T 3hmu_A 224 VAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN--WFGTQT--MGI---RPH-----IMTIA 291 (472)
T ss_dssp EEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHHH--HTC---CCS-----EEEEC
T ss_pred EEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc--cchhHH--hCC---CCc-----eeeec
Confidence 77777777788888754 888999999999999999999999999876653 222211 122 566 44789
Q ss_pred ccCCCCCCCeeEEEEEecCCHHHHHHHHHh--h-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHH-HH
Q 009517 350 KGYYGECGKRGGYMEVTGFSAEVREQIYKV--A-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA-RR 425 (533)
Q Consensus 350 K~~~gl~G~riG~v~~~~~~~~~~~~l~~~--~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 425 (533)
|++ +..|+|+||+++ ++++++.+... . ..+++.++++++++.++|+ ..+. +.+.++++ ++
T Consensus 292 K~l-~gg~~plG~v~~---~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~-----------~~~~-~~~~~~~~~~~ 355 (472)
T 3hmu_A 292 KGL-SSGYAPIGGSIV---CDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLR-----------ILEE-ENILDHVRNVA 355 (472)
T ss_dssp GGG-TTTSSCCEEEEE---EHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHH-----------HHHH-TTHHHHHHHTH
T ss_pred hhh-hcCCcceEEEEE---CHHHHHhcccCCccccCCCCCCHHHHHHHHHHHH-----------HHHH-hHHHHHHHHHH
Confidence 998 433499999998 99999988321 2 2578899999999988874 1111 34555566 66
Q ss_pred HHHHHHHHhcC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCC-----hHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 426 AKTLEDAFNSL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP-----DAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 426 ~~~l~~~L~~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
.+++++.|+++ |++..+++.|.|+.+ .+..... ....... ...++ +.|.++||++.|+.
T Consensus 356 ~~~l~~~L~~l~~~~~v~~vr~~G~~~~i-~~~~~~~-----~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~g------ 422 (472)
T 3hmu_A 356 APYLKEKWEALTDHPLVGEAKIVGMMASI-ALTPNKA-----SRAKFASEPGTIGYICR-ERCFANNLIMRHVG------ 422 (472)
T ss_dssp HHHHHHHHHGGGGSTTEEEEEEETTEEEE-EECSCGG-----GTCCBSSCTTHHHHHHH-HHHHHTTBCCEEET------
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCceEEE-EEecCcc-----ccccccchhHHHHHHHH-HHHHHCCcEEEecC------
Confidence 66777766554 667778888877654 2321100 0000000 22334 44556899999852
Q ss_pred CCceEEEEe--cCCcCcHHHHHHHHHHHHHHHHHH
Q 009517 498 GTWHFRCTI--LPQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 498 g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++||++ ..++++|++++++|+++++++.++
T Consensus 423 --~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~~~ 455 (472)
T 3hmu_A 423 --DRMIISPPLVITPAEIDEMFVRIRKSLDEAQAE 455 (472)
T ss_dssp --TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3999995 589999999999999999887644
No 130
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=1.9e-31 Score=274.49 Aligned_cols=311 Identities=13% Similarity=0.150 Sum_probs=221.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~ 214 (533)
|+++++++.+++..... ....| ..++++++++.+.+.+| .++|++|+|+++|+..+++.+. . +
T Consensus 58 ~~~v~~a~~~~~~~~~~-~~~~~-----~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a~~~al~~~~-~~~~~~~~ 126 (397)
T 2ord_A 58 HPRLVEAIKDQAEKLIH-CSNLF-----WNRPQMELAELLSKNTF----GGKVFFANTGTEANEAAIKIAR-KYGKKKSE 126 (397)
T ss_dssp CHHHHHHHHHHHHHCSC-CCTTS-----EEHHHHHHHHHHHHTTT----SCEEEEESSHHHHHHHHHHHHH-HHHHHHCT
T ss_pred CHHHHHHHHHHHHhccc-Ccccc-----CCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHHHHHHHHH-HHhhcCCC
Confidence 68899999888876321 11113 12344444444444444 5799999999999999999885 3 5
Q ss_pred -CCeEEEcCCcCcch-HHHHHHhCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 009517 215 -NDGILCPIPQYPLY-SASIALHGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (533)
Q Consensus 215 -gd~Vlv~~p~~~~~-~~~~~~~g~~------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~ 280 (533)
+++|++++|+|++. ...+...|.+ ++.++. .|+++|++++++ ++++|++++|+
T Consensus 127 ~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~ 193 (397)
T 2ord_A 127 KKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE------DVCAVFLEPIQ 193 (397)
T ss_dssp TCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT------TEEEEEECSEE
T ss_pred CCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc------CeEEEEEeccc
Confidence 47899999999774 4467777776 666664 279999998875 79999999999
Q ss_pred CCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe
Q 009517 281 NPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (533)
Q Consensus 281 NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r 359 (533)
||||. +++.+++++|+++|++||+++|+||+|.++.+.+. ..++..+ +. .+| +.||||.+ + +|+|
T Consensus 194 nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~~--~~---~~d-----~~s~sK~~-~-~G~r 259 (397)
T 2ord_A 194 GESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK--LFAYQKY--GV---VPD-----VLTTAKGL-G-GGVP 259 (397)
T ss_dssp CTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSHHHHH--TC---CCS-----EEEECGGG-G-TTSC
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc--chhhhhh--CC---CCC-----eeeecccc-C-CCcC
Confidence 99999 99999999999999999999999999998766543 2222222 11 245 23889999 6 7999
Q ss_pred eEEEEEecCCHHHHHHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q 009517 360 GGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-- 436 (533)
Q Consensus 360 iG~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 436 (533)
+||+++ +++++ .+.... ..+++++++++.++.++|+.. +. ++++++++++++++.+.|+++
T Consensus 260 ~G~~~~---~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~-----------~~-~~~~~~~~~~~~~l~~~L~~~~~ 323 (397)
T 2ord_A 260 IGAVIV---NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKEL-----------TK-EGFLEEVEEKGNYLMKKLQEMKE 323 (397)
T ss_dssp CEEEEE---CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHH-----------TS-TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEE---chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHH-----------Hh-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 66666 554322 256778999998888877421 11 345667778888888888764
Q ss_pred --CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCc
Q 009517 437 --EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDK 512 (533)
Q Consensus 437 --~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~ 512 (533)
+.+...++.|. |+|++++.+ .+...++..+ .++||.+.||. .+++||++. .++++
T Consensus 324 ~~~~~~~~~~~g~-~~~~~~~~~------------~~~~~l~~~l-~~~gi~v~~~~-------~~~iRis~~~~~~~e~ 382 (397)
T 2ord_A 324 EYDVVADVRGMGL-MIGIQFREE------------VSNREVATKC-FENKLLVVPAG-------NNTIRFLPPLTVEYGE 382 (397)
T ss_dssp HCTTEEEEEEETT-EEEEEECTT------------SCHHHHHHHH-HHTTEECEEET-------TTEEEECCCTTCCHHH
T ss_pred hCCceEEEEEEeE-EEEEEECCh------------HHHHHHHHHH-HHCCCEEccCC-------CCEEEEECCcCCCHHH
Confidence 33333455554 556555411 1234445454 45899999862 338999964 78999
Q ss_pred HHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKN 526 (533)
Q Consensus 513 i~~~~~~l~~~l~~ 526 (533)
+++++++|++++++
T Consensus 383 i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 383 IDLAVETLKKVLQG 396 (397)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988763
No 131
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=7.9e-30 Score=263.62 Aligned_cols=299 Identities=10% Similarity=0.095 Sum_probs=219.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEE-EcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCC
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIF-LTDGASPAVHMMMQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDE 246 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~-~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~ 246 (533)
.++.+++.+.+.+.+| .+.++++ +++|+++++..+++.+. ++||+|++++|+|++ +...++..|++++.++++.
T Consensus 43 ~~~~~~l~~~la~~~g--~~~~~~~~~~~s~t~al~~~~~~l~-~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 119 (416)
T 3isl_A 43 TGIMNETMEMLRELFQ--TKNRWAYPIDGTSRAGIEAVLASVI-EPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW 119 (416)
T ss_dssp HHHHHHHHHHHHHHTT--CCCSEEEEEESCHHHHHHHHHHHHC-CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHHhC--CCCCcEEEecCcHHHHHHHHHHHhc-CCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC
Confidence 3344444444444445 4456565 88899999999999998 899999999999987 7778888999999999875
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccH
Q 009517 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (533)
Q Consensus 247 ~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~ 326 (533)
+ +.+|+++|++++++. ++++|++++|+||||.+++ +++|+++|++||+++|+|++|..... + .++
T Consensus 120 ~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~-~~~ 184 (416)
T 3isl_A 120 G--TVFDPEDIIREIKKV-----KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGC----E-VKV 184 (416)
T ss_dssp T--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTS----C-CCT
T ss_pred C--CCCCHHHHHHHHhhC-----CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCC----C-cch
Confidence 4 478999999999853 7899999999999999999 88999999999999999999874221 1 111
Q ss_pred HHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhh--------------------------
Q 009517 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-------------------------- 380 (533)
Q Consensus 327 ~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~-------------------------- 380 (533)
..+ ..+ +++.|++|++.| +.++|++++ ++++++.+....
T Consensus 185 ----~~~---~~d---~~~~s~~K~l~g--~~g~g~~~~---~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~ 249 (416)
T 3isl_A 185 ----DEW---KID---AAIGGTQKCLSV--PSGMAPITY---NERVADVIAARKKVERGIATQADRAALSGNRPITSNYF 249 (416)
T ss_dssp ----TTT---TCS---EEECCSSSTTCC--CSSEEEEEE---CHHHHHHHHTC------------------CCCCSCSTT
T ss_pred ----hhc---CCC---EEEecCccccCC--CCCeEEEEE---CHHHHHHhhccccccccccccccchhccCCCCCCcccc
Confidence 011 123 789999998645 456899998 999988876421
Q ss_pred ----------h---ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Q 009517 381 ----------S---VNLCSNISGQILASLVMSPPKVGDESYESYCAE-RDGILSSLARRAKTLEDAFNSLEGITCNKAEG 446 (533)
Q Consensus 381 ----------~---~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g 446 (533)
. ..++.+...+.++.++++ ...++ +++++++++++++++.+.|+++ |+.+..+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 318 (416)
T 3isl_A 250 DLSQLEDYWSERRLNHHTEATTMLYALREGVR----------LVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDS 318 (416)
T ss_dssp CHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGG
T ss_pred chHHHHhhhcccCCCCCCCCHHHHHHHHHHHH----------HHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCcc
Confidence 1 123456666666666553 12233 6788889999999999999997 888877654
Q ss_pred ---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c-CCcCc-HHHHHHHH
Q 009517 447 ---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L-PQEDK-IPAIVTRL 520 (533)
Q Consensus 447 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~-~~~e~-i~~~~~~l 520 (533)
+.++++.+ |.+ .+...++..+++++||.+.||... .+.++|||++ . .++++ +++++++|
T Consensus 319 ~~~~~~~~~~~--~~~----------~~~~~l~~~L~~~~gi~v~~g~~~---~~~~~iRi~~~~~~~~~e~i~~~~~~l 383 (416)
T 3isl_A 319 CKMPVVTCVEI--PGG----------IDGESVRDMLLAQFGIEIASSFGP---LAGKIWRIGTMGYSCRKENVLFVLAGL 383 (416)
T ss_dssp GBCTTEEEEEC--CTT----------CCHHHHHHHHHHHHCEECBCCCST---TTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred ccCCcEEEEeC--CCC----------CCHHHHHHHHHHhCCEEEecCCCC---CCCCEEEEecccCCCcHHHHHHHHHHH
Confidence 44555443 211 124455556666569999998743 2334999999 3 55666 99999999
Q ss_pred HHHHHHH
Q 009517 521 TDFHKNF 527 (533)
Q Consensus 521 ~~~l~~~ 527 (533)
+++++++
T Consensus 384 ~~~~~~~ 390 (416)
T 3isl_A 384 EAVLLRH 390 (416)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9998864
No 132
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.97 E-value=7.9e-31 Score=265.25 Aligned_cols=319 Identities=12% Similarity=0.104 Sum_probs=222.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++++++++.+++.. ....|++.....++++.+++++ | . .++|++|+|+++++..+++.++ ++||+|++
T Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~l~~~la~~~----g-~--~~~v~~~~~gt~a~~~al~~~~-~~gd~vi~ 88 (356)
T 1v72_A 21 SPEVAQALVKHSSG----QAGPYGTDELTAQVKRKFCEIF----E-R--DVEVFLVPTGTAANALCLSAMT-PPWGNIYC 88 (356)
T ss_dssp CHHHHHHHHHTTSS----CCCSTTCSHHHHHHHHHHHHHH----T-S--CCEEEEESCHHHHHHHHHHTSC-CTTEEEEE
T ss_pred CHHHHHHHHhhccC----cccccccchHHHHHHHHHHHHh----C-C--CCcEEEeCCccHHHHHHHHHhc-CCCCEEEE
Confidence 68888888776532 1345655444556666666654 4 1 3469999999999999999988 79999999
Q ss_pred cCCcCcchHHH--HHHh--CCeEEEEecCCCCCCCCCHHHHHH-HHHHHH-hcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 221 PIPQYPLYSAS--IALH--GGTLVPYYLDEATGWGLETSEVKK-QLEAAK-AKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 221 ~~p~~~~~~~~--~~~~--g~~~~~v~~~~~~~~~ld~~~l~~-~i~~~~-~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
+.|+|..+... +... |.+++.++.+ ++.+|+++|++ ++++.. ..++++++|++++|+| ||.+++.+++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~ 164 (356)
T 1v72_A 89 HPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEA 164 (356)
T ss_dssp CTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHH
T ss_pred cCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHH
Confidence 99998775544 6666 9999998875 36899999999 886410 1123689999999987 999999999999
Q ss_pred HHHHHHHcCCEEEEccccccccc--cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE--EEEEecCCH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVY--VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG--YMEVTGFSA 370 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG--~v~~~~~~~ 370 (533)
|+++|++||+++|+|++|..+.. .+..+ ..+ .+ +. ..+ +++.|+||+ | .|+| |+++ ++
T Consensus 165 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~-~~--~~---~~d---~~~~s~sK~--g---~~~G~g~~~~---~~ 226 (356)
T 1v72_A 165 IGDVCKSSSLGLHMDGSRFANALVSLGCSP-AEM-TW--KA---GVD---ALSFGATKN--G---VLAAEAIVLF---NT 226 (356)
T ss_dssp HHHHHHHTTCEEEEEETTHHHHHHHHTCCT-TTT-TG--GG---TCC---EEEECCGGG--T---CSSCEEEEES---SG
T ss_pred HHHHHHHcCCeEEEEchhhHhHhccCCCCH-HHh-hh--hh---cCC---EEEEecccC--C---CcCccEEEEE---CH
Confidence 99999999999999999976422 12111 100 00 00 123 335699996 2 2555 7776 88
Q ss_pred HHHHHHHHhhh--ccccC-ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCce
Q 009517 371 EVREQIYKVAS--VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGA 447 (533)
Q Consensus 371 ~~~~~l~~~~~--~~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg 447 (533)
++++.+..... ..... ...++..+...++.. . ...+.++++++++++.+.|++++|+.+..|.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 294 (356)
T 1v72_A 227 SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDD-----L-------WLRNARKANAAAQRLAQGLEGLGGVEVLGGTEA 294 (356)
T ss_dssp GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTT-----H-------HHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCS
T ss_pred HHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhh-----h-------HHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCc
Confidence 88888766532 11122 223333344445321 1 123456677888999999998889998888888
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
+++|++++ . .++.. |.++||.+.||. |+ .+++||++. .+++++++++++|+++++
T Consensus 295 ~~~~~~~~--~---------------~~~~~-l~~~gi~v~~g~-~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 351 (356)
T 1v72_A 295 NILFCRLD--S---------------AMIDA-LLKAGFGFYHDR-WG----PNVVRFVTSFATTAEDVDHLLNQVRLAAD 351 (356)
T ss_dssp SEEEEEEC--H---------------HHHHH-HHHTTCBCBCSS-SS----TTEEEEECCTTCCHHHHHHHHHHHHHTC-
T ss_pred cEEEEEcC--H---------------HHHHH-HHhcCeEEeccc-cC----CCeEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 88996553 1 23334 467899999987 54 349999985 688999999999999887
Q ss_pred HHH
Q 009517 526 NFM 528 (533)
Q Consensus 526 ~~~ 528 (533)
+..
T Consensus 352 ~~~ 354 (356)
T 1v72_A 352 RTQ 354 (356)
T ss_dssp ---
T ss_pred hhc
Confidence 654
No 133
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.97 E-value=5e-31 Score=275.04 Aligned_cols=330 Identities=15% Similarity=0.133 Sum_probs=224.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHhcc-CCCCeE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIR-SENDGI 218 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~-~~gd~V 218 (533)
|+++++++.+++.+. ..|....|..++++++++++.+.++ ... ++|++|+|+++|+..+++.++. .++++|
T Consensus 61 ~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~v 133 (439)
T 3dxv_A 61 HPAIVAAVSAAAANP-----AGATILSASNAPAVTLAERLLASFP--GEGTHKIWFGHSGSDANEAAYRAIVKATGRSGV 133 (439)
T ss_dssp CHHHHHHHHHHHHSC-----SCSCSSSSEEHHHHHHHHHHHHTTT--CTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEE
T ss_pred CHHHHHHHHHHHHhc-----cCccccccCCHHHHHHHHHHHHhCC--CCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEE
Confidence 789999999998862 3466566677888888888887765 234 6999999999999999998621 256889
Q ss_pred EEcCCcCcchHHHHHHhCCeE---------------EEEecCCCCCCCC----CHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 009517 219 LCPIPQYPLYSASIALHGGTL---------------VPYYLDEATGWGL----ETSEVKKQLEAAKAKGITVRALVVINP 279 (533)
Q Consensus 219 lv~~p~~~~~~~~~~~~g~~~---------------~~v~~~~~~~~~l----d~~~l~~~i~~~~~~g~~~~~iil~~p 279 (533)
++.+|+|+++.......+... ..++.... .... |+++|+++++.. ...++++|+++++
T Consensus 134 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~ 210 (439)
T 3dxv_A 134 IAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPY-RNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPI 210 (439)
T ss_dssp EEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCB-TTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSS
T ss_pred EEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcc-cccccHHHHHHHHHHHHHhc--CCCCEEEEEEccc
Confidence 999999988766554443321 12222211 0011 689999999510 1126888888888
Q ss_pred CCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC
Q 009517 280 GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (533)
Q Consensus 280 ~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ 358 (533)
+|++|.+. +++++++|+++|++||+++|+||+|.+|.+.|. ...+.. .++ .++ +.||||++ + +|+
T Consensus 211 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~--~~~~~~--~~~---~~d-----i~s~sK~~-~-~G~ 276 (439)
T 3dxv_A 211 QSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR--LHCFEH--EGF---VPD-----ILVLGKGL-G-GGL 276 (439)
T ss_dssp BSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS--SSGGGG--TTC---CCS-----EEEECGGG-G-TTS
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhHHHh--cCC---CCC-----EEEEcchh-c-CCc
Confidence 88888755 556699999999999999999999998765543 111111 111 355 33999999 5 599
Q ss_pred eeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Q 009517 359 RGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS-- 435 (533)
Q Consensus 359 riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 435 (533)
|+||+++ ++++++.+.+... .++ ++++++.++.++|+. .+. +.+.++++++++++++.|.+
T Consensus 277 riG~~~~---~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~-----------~~~-~~~~~~~~~~~~~~~~~l~~~~ 340 (439)
T 3dxv_A 277 PLSAVIA---PAEILDCASAFAMQTLH-GNPISAAAGLAVLET-----------IDR-DDLPAMAERKGRLLRDGLSELA 340 (439)
T ss_dssp CCEEEEE---EHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHH-----------HHH-TTHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEE---CHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHH-----------HHh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 8999887765533 566 899999988887741 111 23444455555555555544
Q ss_pred --CCCceEecCCceeEEecccCC------CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 436 --LEGITCNKAEGAMYLFPRIQL------PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 436 --~~g~~~~~~~gg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
++.+..+++.|.|+ |+.+.. |... ....++..+ .++||.+.||..++ +++||++.
T Consensus 341 ~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l-~~~Gv~v~~~~~~~-----~~iRi~~~ 403 (439)
T 3dxv_A 341 KRHPLIGDIRGRGLAC-GMELVCDRQSREPARA----------ETAKLIYRA-YQLGLVVYYVGMNG-----NVLEFTPP 403 (439)
T ss_dssp HHCTTEEEEEEETTEE-EEEEEEETTTTEECHH----------HHHHHHHHH-HHHTEECEEESTTS-----CEEEECCC
T ss_pred HhCCCeEEEEEEEEEE-EEEEecCccccCCCHH----------HHHHHHHHH-HHCCcEEeecCCCC-----CEEEEECC
Confidence 45667777776654 443310 1110 123344444 45799999975332 38999874
Q ss_pred --CCcCcHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+++++++++++|+++++++
T Consensus 404 ~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 404 LTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTG
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 78899999999999998865
No 134
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=5.5e-30 Score=269.25 Aligned_cols=379 Identities=16% Similarity=0.153 Sum_probs=258.1
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++..+.++++..+..++..+...|.+ ++++..|.+-. +.. ....++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~~~~g~~yl----------------------D~~--~~~~~~~ 56 (467)
T 1ax4_A 10 RIKMVEKIRVPSREEREAALKEAGYN---------PFLLPSSAVYI----------------------DLL--TDSGTNA 56 (467)
T ss_dssp EEEEEEECCCCCHHHHHHHHHHTTSC---------GGGSCGGGCSE----------------------ECS--CSSSCCC
T ss_pred hhceeecccccchhHHHHHHHhcCcC---------cccCCCCceee----------------------ecc--cCcCCHH
Confidence 66778888888888888888887766 88888877532 000 0001245
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC----CCCe--
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----ENDG-- 217 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----~gd~-- 217 (533)
+.+++.+.+.. ....|.+..+..+|+++++++++ .++|++|+|+++|+..+++.++ + +||+
T Consensus 57 v~~a~~~~~~~----~~~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~-~~~~~~Gd~~~ 123 (467)
T 1ax4_A 57 MSDHQWAAMIT----GDEAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLL-KYKQKEGKAKN 123 (467)
T ss_dssp EEHHHHHHHHT----CCCCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHH-HHHHHTTCCSS
T ss_pred HHHHHHHHHhh----cccccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHH-HhhccCCCccc
Confidence 66666666654 23468888889999999999984 3689999999999999999998 7 8998
Q ss_pred -EEEcCCcCcchHHHHHHhCCeEEEEecCC---C-----CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC-ccCC
Q 009517 218 -ILCPIPQYPLYSASIALHGGTLVPYYLDE---A-----TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVL 287 (533)
Q Consensus 218 -Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~---~-----~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt-G~~~ 287 (533)
|+++.+.|..+...+...|.+++.++... . .++.+|+++|+++|++.. .+++++|++++||||| |.++
T Consensus 124 ~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~ 201 (467)
T 1ax4_A 124 PVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPV 201 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCC
T ss_pred eEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCC
Confidence 99997777777888888999988776532 1 134689999999998631 0268999999999999 8999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccc--c--------cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQE--N--------VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
+.+++++|+++|++||+++|+||++.. . .+.+ .++..+..++.. ..| +++.|+||++ |++
T Consensus 202 ~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~d---~~~~s~sK~~-g~~- 271 (467)
T 1ax4_A 202 SMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKN----ATIKEVIFDMYK-YAD---ALTMSAKKDP-LLN- 271 (467)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTT----CCHHHHHHHHGG-GCS---EEEEETTSTT-CCS-
T ss_pred ChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCC----Cchhhhhhhhcc-ccc---eEEEeccccC-CCC-
Confidence 999999999999999999999998542 1 1222 122232211100 133 4568999987 554
Q ss_pred Cee-EEEEEecCC-H-HHHHHHHHhhh-----ccccC-ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 009517 358 KRG-GYMEVTGFS-A-EVREQIYKVAS-----VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428 (533)
Q Consensus 358 ~ri-G~v~~~~~~-~-~~~~~l~~~~~-----~~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (533)
+ ||++. + + ++++.+..... ..++. +...+.++...++.. .+ +...++..+++++
T Consensus 272 --~Gg~~~~---~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----------~~--~~~~~~~~~~~~~ 334 (467)
T 1ax4_A 272 --IGGLVAI---RDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEG----------TE--EEYLHYRIGQVKY 334 (467)
T ss_dssp --SCEEEEE---SSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHT----------TC--HHHHHHHHHHHHH
T ss_pred --cceEEEe---CCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHh----------hh--hhHHHHHHHHHHH
Confidence 3 56665 5 6 88887765432 11222 222222222233210 00 1122233356778
Q ss_pred HHHHHhcCCCceEecCCceeEEecccC-----CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-CCCC-CCC-----
Q 009517 429 LEDAFNSLEGITCNKAEGAMYLFPRIQ-----LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-GSGF-GQV----- 496 (533)
Q Consensus 429 l~~~L~~~~g~~~~~~~gg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-g~~f-~~~----- 496 (533)
+.+.|++. |+.++.|.+++++|+++. ++.. +. +...++..++.++||.+.| |..| +..
T Consensus 335 l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~ 404 (467)
T 1ax4_A 335 LGDRLREA-GIPIQYPTGGHAVFVDCKKLVPQIPGD--------QF-PAQAVINALYLESGVRAVEIGSFLLGRDPATGE 404 (467)
T ss_dssp HHHHHHHT-TCCBCSSCCSSEEEEESTTTCTTSCGG--------GC-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHhC-CCCcccCCCceEEEEehhhhccccccC--------CC-CHHHHHHHHHHhcCceeeecCcccccccccccc
Confidence 88888874 888888899999997732 1110 01 1345566665889999999 6542 210
Q ss_pred ---CCCceEEEEec---CCcCcHHHHHHHHHHHHHHH
Q 009517 497 ---PGTWHFRCTIL---PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 497 ---~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~ 527 (533)
...+++||++. .+++++++++++|++++++.
T Consensus 405 ~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 405 QKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp BCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 11359999996 68899999999999988775
No 135
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.97 E-value=5.6e-31 Score=270.72 Aligned_cols=317 Identities=12% Similarity=0.107 Sum_probs=217.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~ 214 (533)
++++++++.+++.+. .+.| ..+..++++++++++.+.+| .++|++|+|+++|+..+++.+.. .+
T Consensus 54 ~p~v~~a~~~~~~~~----~~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 123 (395)
T 3nx3_A 54 HAKFNAKIKAQVDKL----LHTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTESIEGAMKTARKYAFNKGVK 123 (395)
T ss_dssp CHHHHHHHHHHHTTC----SCCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc----cccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHHHHHHHHHHHhhccCCC
Confidence 689999999988762 2222 12234555566666655544 57999999999999999988752 14
Q ss_pred CCeEEEcCCcCcchHHHHHHhCC-------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 009517 215 NDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N 281 (533)
+++|++++|+|+++.......+. .+..++. .|+++|++++++ ++++|++++++|
T Consensus 124 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~~ 190 (395)
T 3nx3_A 124 GGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE------KTCAIILESVQG 190 (395)
T ss_dssp TCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT------TEEEEEEESEEC
T ss_pred CCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC------CeEEEEEeCccC
Confidence 69999999999987655544432 3444442 279999999875 789999888877
Q ss_pred CCccC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee
Q 009517 282 PTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (533)
Q Consensus 282 PtG~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri 360 (533)
++|.+ ++++++++|+++|++||+++|+||+|.+|.+.+. ...... .++ .++ +.||||.+ + .|+|+
T Consensus 191 ~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~~~--~~~---~~d-----~~t~sK~~-~-~G~~~ 256 (395)
T 3nx3_A 191 EGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK--FFAYEH--AQI---LPD-----IMTSAKAL-G-CGLSV 256 (395)
T ss_dssp TTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEEECGGG-T-TTSCC
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc--chhHHh--cCC---CCC-----EEEecccc-c-CCCce
Confidence 77765 7888999999999999999999999999765543 111111 111 344 55899999 5 49999
Q ss_pred EEEEEecCCHHH-HHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009517 361 GYMEVTGFSAEV-REQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG 438 (533)
Q Consensus 361 G~v~~~~~~~~~-~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 438 (533)
||+++ ++++ ++.+.+... .+++.++++++++.++|+.. + ..+..+++++..+..++.+.+.+.+++.
T Consensus 257 G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (395)
T 3nx3_A 257 GAFVI---NQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIF-------K-EEKILENVNKLTPYLEQSLDELINEFDF 325 (395)
T ss_dssp EEEEE---CHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHH-------H-HTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEE---chhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHH-------H-hhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998 8888 777765543 67888999999998887410 0 0011222222233333444444444566
Q ss_pred ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHH
Q 009517 439 ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAI 516 (533)
Q Consensus 439 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~ 516 (533)
+..+++.|. |+|+.+... .+...++.. |.++||.+.|+. .+++||++. .++++++++
T Consensus 326 ~~~~~~~g~-~~~~~~~~~------------~~~~~~~~~-l~~~Gi~v~~~~-------~~~iRi~~~~~~t~e~i~~~ 384 (395)
T 3nx3_A 326 CKKRKGLGF-MQGLSLDKS------------VKVAKVIQK-CQENALLLISCG-------ENDLRFLPPLILQKEHIDEM 384 (395)
T ss_dssp EEEEEEETT-EEEEEECTT------------SCHHHHHHH-HHHTTEECEEET-------TTEEEECCCTTCCHHHHHHH
T ss_pred eEEEEeEEE-EEEEEeCCc------------chHHHHHHH-HHHCCCEEecCC-------CCEEEEECCCCCCHHHHHHH
Confidence 666666665 455444411 123344444 556899999853 339999874 788999999
Q ss_pred HHHHHHHHHH
Q 009517 517 VTRLTDFHKN 526 (533)
Q Consensus 517 ~~~l~~~l~~ 526 (533)
+++|++++++
T Consensus 385 l~~l~~~l~~ 394 (395)
T 3nx3_A 385 SEKLRKALKS 394 (395)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 136
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=7.7e-31 Score=273.20 Aligned_cols=336 Identities=12% Similarity=0.058 Sum_probs=218.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 219 (533)
|+++++++.+++.+.. ...| +.....+|++++++++ + .+++|++|+|+++|+..+++.++. .++++|+
T Consensus 73 ~p~v~~a~~~~~~~~~---~~~~-~~~~~~~l~~~la~~~----~---~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi 141 (434)
T 3l44_A 73 HPHITKAITTAAENGV---LYGT-PTALEVKFAKMLKEAM----P---ALDKVRFVNSGTEAVMTTIRVARAYTGRTKIM 141 (434)
T ss_dssp CHHHHHHHHHHHHHCS---CCSS-CCHHHHHHHHHHHHHC----T---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhCc---CCCC-CCHHHHHHHHHHHHhC----C---CCCEEEEeCchHHHHHHHHHHHHHhhCCCEEE
Confidence 7899999999988631 2234 3444667777777764 2 468999999999999999998762 1568999
Q ss_pred EcCCcCcchHHHHHHhCCe-EEEEecCCCCCCC------------CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 220 CPIPQYPLYSASIALHGGT-LVPYYLDEATGWG------------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~-~~~v~~~~~~~~~------------ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
+++|+|+++...+...+.. ...+......++. -|+++|++++++.. .++++|+++.++|++|.+
T Consensus 142 ~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~ 218 (434)
T 3l44_A 142 KFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWG---HEVAAILVEPIVGNFGIV 218 (434)
T ss_dssp EETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCB
T ss_pred EEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCC---CCEEEEEEcCCCCCCCCc
Confidence 9999999876544333221 1111111000000 18999999998631 156666666666777765
Q ss_pred C-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 287 L-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 287 ~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
. +++++++|.++|++||+++|+||+|.+| +.+. ...+.. ..+ .+| +.||||++ | +|+|+||+++
T Consensus 219 ~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~--~~~~~~--~~~---~~d-----i~t~sK~~-~-~G~~iG~~~~ 283 (434)
T 3l44_A 219 EPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY--GGAQDL--LGV---TPD-----LTALGKVI-G-GGLPIGAYGG 283 (434)
T ss_dssp CCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS--SCHHHH--HTC---CCS-----EEEEEGGG-G-TTSSCEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc--cHHHHH--cCC---CCC-----eeehhhhh-c-CCcCeeeEEE
Confidence 5 8899999999999999999999999998 5442 222111 122 456 56899999 5 7999999988
Q ss_pred ecCCHHHHHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CC
Q 009517 366 TGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS----LE 437 (533)
Q Consensus 366 ~~~~~~~~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~ 437 (533)
++++++.+.+. ...++++++++++++.++|+... . +.+.++++++++++++.|++ .+
T Consensus 284 ---~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-----------~-~~~~~~~~~~~~~l~~~L~~~~~~~~ 348 (434)
T 3l44_A 284 ---KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQ-----------Q-EGLYEKLDELGATLEKGILEQAAKHN 348 (434)
T ss_dssp ---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHT-----------S-TTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHH-----------c-ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999887652 23578899999999988874211 0 22334444555555555544 43
Q ss_pred CceEecCCceeEEecccCCCH-HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHH
Q 009517 438 GITCNKAEGAMYLFPRIQLPE-KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAI 516 (533)
Q Consensus 438 g~~~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~ 516 (533)
.+..+++.|.|+.| .+..+. ................++ +.|.++||.+.|+.. .++|+++..++++++++
T Consensus 349 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~~-------~~~rl~~~~t~e~i~~~ 419 (434)
T 3l44_A 349 IDITLNRLKGALTV-YFTTNTIEDYDAAQDTDGEMFGKFF-KLMLQEGVNLAPSKY-------EAWFLTTEHTKEDIEYT 419 (434)
T ss_dssp CCEEEEEETTEEEE-EESSSCCCSHHHHHHSCHHHHHHHH-HHHHHTTEECCSSTT-------CCEECCTTCCHHHHHHH
T ss_pred CCEEEEeeccEEEE-EEecCcccchhhccccCHHHHHHHH-HHHHHCCeEEeecCC-------CcEEEecccCHHHHHHH
Confidence 44556666766554 232110 000000000000113334 445568999998632 26899888999999999
Q ss_pred HHHHHHHHHHHHH
Q 009517 517 VTRLTDFHKNFMD 529 (533)
Q Consensus 517 ~~~l~~~l~~~~~ 529 (533)
+++|+++++++.+
T Consensus 420 l~~l~~~l~~~~~ 432 (434)
T 3l44_A 420 IEAVGRAFAALAD 432 (434)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 137
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=8.4e-30 Score=259.89 Aligned_cols=321 Identities=13% Similarity=0.084 Sum_probs=223.1
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeE
Q 009517 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (533)
Q Consensus 139 ~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~V 218 (533)
.+|+++++++.+++.. .|. .+..++.+++++++.+.+|.+.+.+.+++|+|+++++..+++.++ ++||+|
T Consensus 29 ~~~~~v~~a~~~~~~~-------~~~--~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~-~~gd~v 98 (376)
T 3f0h_A 29 MSSEEVRAIGAEQVPY-------FRT--TEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF-TKKDKV 98 (376)
T ss_dssp CCCHHHHHHHTSCCCC-------CSS--HHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC-CTTCCE
T ss_pred CCcHHHHHHhcCCCCC-------CCC--HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc-CCCCeE
Confidence 3478888877554421 122 124466666666666666754333455669999999999999998 899999
Q ss_pred EEcCCcCcchH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 219 LCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 219 lv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
++++|+|+++. ..+...|.+++.++.+. ++.+|++++++++++ ++++|++++|+||||.+++ +++|+
T Consensus 99 i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~ 167 (376)
T 3f0h_A 99 LVIDGGSFGHRFVQLCEIHEIPYVALKLEH--GKKLTKEKLYEYDNQ------NFTGLLVNVDETSTAVLYD---TMMIG 167 (376)
T ss_dssp EEEESSHHHHHHHHHHHHTTCCEEEEECCT--TCCCCHHHHHTTTTS------CCCEEEEESEETTTTEECC---HHHHH
T ss_pred EEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHhhcc------CceEEEEecccCCcceecC---HHHHH
Confidence 99998776644 34667799999999864 568999999987755 7999999999999999999 99999
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
++|++||+++|+|++|..+... ..+.. . ..+ +++.|+||+++|++| +|++++ ++++++.+
T Consensus 168 ~l~~~~~~~li~D~~~~~~~~~-----~~~~~----~---~~d---~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~ 227 (376)
T 3f0h_A 168 EFCKKNNMFFVCDCVSAFLADP-----FNMNE----C---GAD---VMITGSQKVLACPPG--ISVIVL---APRGVERV 227 (376)
T ss_dssp HHHHHTTCEEEEECTTTTTTSC-----CCHHH----H---TCS---EEEEETTTTTCCCSS--CEEEEE---CHHHHHHH
T ss_pred HHHHHcCCEEEEEcCccccCcc-----ccccc----c---Ccc---EEEecCcccccCCCc--eEEEEE---CHHHHHHh
Confidence 9999999999999999864321 12211 1 123 778999999954666 566776 89998887
Q ss_pred HHhhh------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC
Q 009517 377 YKVAS------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 377 ~~~~~------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
..... ..++++...+.++.++++ ...+ .++.++++++++++++.+.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (376)
T 3f0h_A 228 EKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLK----------EIKKHGGADAEVARIASQAADFRAKIKDL 297 (376)
T ss_dssp HTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH----------HHHHTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred hcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHH----------HHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 64211 122344434344444442 1112 25677888899999999999988
Q ss_pred CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHH
Q 009517 437 EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIP 514 (533)
Q Consensus 437 ~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~ 514 (533)
++.+..+.....++.-.. + + .+...+...+++++||.+.||... .+.+++||++. .++++++
T Consensus 298 -~~~~~~~~~~~~~~~~~~-~-~----------~~~~~l~~~l~~~~gi~v~~g~~~---~~~~~lRis~~~~~t~e~i~ 361 (376)
T 3f0h_A 298 -PFELVSESPANGVTSVHP-T-T----------ANAYDIFLKLKDEYGIWICPNGGE---MKDTIFRVGHIGALTHEDNT 361 (376)
T ss_dssp -SEEECCSSBBTTEEEEEE-S-S----------SCHHHHHHHHHHHSSEECEECCGG---GTTTCEEEECCSSCCHHHHH
T ss_pred -CCccCccccCceEEEEeC-C-C----------CCHHHHHHHHHHhCCEEEecCccc---cCCCEEEEecCCCCCHHHHH
Confidence 777665433222221111 1 0 123445556555559999998432 23348999995 7889999
Q ss_pred HHHHHHHHHHHH
Q 009517 515 AIVTRLTDFHKN 526 (533)
Q Consensus 515 ~~~~~l~~~l~~ 526 (533)
+++++|++++++
T Consensus 362 ~~~~~l~~~l~~ 373 (376)
T 3f0h_A 362 TLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998763
No 138
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=3.7e-30 Score=263.19 Aligned_cols=298 Identities=11% Similarity=0.051 Sum_probs=219.8
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--CCCCeEEEc-CCcCcchH-HHHHHhCCeEEEEe
Q 009517 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--SENDGILCP-IPQYPLYS-ASIALHGGTLVPYY 243 (533)
Q Consensus 168 G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~gd~Vlv~-~p~~~~~~-~~~~~~g~~~~~v~ 243 (533)
...+++++++++++...+ +++++|++|+|+++++..+++.+.. ++||+|+++ .|+|+.+. ..++..|++++.++
T Consensus 39 ~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~ 116 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVR 116 (385)
T ss_dssp HHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEe
Confidence 466788889988875444 4578999999999999999999852 489999887 66777663 67788899999999
Q ss_pred c-CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEccccccccccCC
Q 009517 244 L-DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYVPE 320 (533)
Q Consensus 244 ~-~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~--~~~lI~De~y~~~~~~~~ 320 (533)
+ +. ++.+|+++|++++++. ++++|++++|+||||.+++ +++|+++|++| |+++|+||+|.. +.
T Consensus 117 ~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~----~~ 182 (385)
T 2bkw_A 117 PLKI--GESVPLELITEKLSQN-----SYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSI----GC 182 (385)
T ss_dssp CSST--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTT----TT
T ss_pred cCCC--CCCCCHHHHHHHHhcC-----CCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECcccc----CC
Confidence 8 53 5679999999999762 5899999999999999998 88999999999 999999999974 21
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH-HHH----------------------
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-QIY---------------------- 377 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~-~l~---------------------- 377 (533)
.+ .++ ..+ ..+ +++.|+||+++|++| +||+++ ++++++ .+.
T Consensus 183 ~~-~~~----~~~---~~d---~~~~s~~K~~~~~~G--~G~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 246 (385)
T 2bkw_A 183 EE-FEF----DEW---GVD---FALTASQKAIGAPAG--LSISLC---SSRFMDYALNDSKNGHVHGYFSSLRRWTPIME 246 (385)
T ss_dssp SC-CCT----TTT---TCS---EEEEESSSTTCCCSC--EEEEEE---CHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHH
T ss_pred cc-ccc----ccc---Cce---EEEecCccccccCCc--ceEEEE---cHHHHHHHHhhccCCCCCceeecHHHHhhHHH
Confidence 11 111 111 123 778999998755666 499998 887766 431
Q ss_pred Hhhhc----cccCChHHHHHHHHHcCCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHH-hcCCCceEecCC-----c
Q 009517 378 KVASV----NLCSNISGQILASLVMSPPKVGDESYESYCAE-RDGILSSLARRAKTLEDAF-NSLEGITCNKAE-----G 446 (533)
Q Consensus 378 ~~~~~----~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L-~~~~g~~~~~~~-----g 446 (533)
..... .++++..++.++..+|+ ...++ +++++++++++++++.+.| +++ |+.+..+. .
T Consensus 247 ~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~ 315 (385)
T 2bkw_A 247 NYEAGKGAYFATPPVQLINSLDVALK----------EILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSA 315 (385)
T ss_dssp HHHTTCCCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBC
T ss_pred hhhccCCCCCCCCCHHHHHHHHHHHH----------HHHHccHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccC
Confidence 11110 13566777776666653 11222 5677888999999999999 988 88877532 4
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEE-ec-----CCcCcHHHHHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCT-IL-----PQEDKIPAIVTRL 520 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis-~~-----~~~e~i~~~~~~l 520 (533)
+.++|+.++ . ...++.. |.++||.+.||..+.. +.+++||+ ++ .+++++++++++|
T Consensus 316 ~~~~~~~~~--~-------------~~~~~~~-l~~~gi~v~~g~~~~~--~~~~iRis~~~~~~~~~~~e~i~~~~~~l 377 (385)
T 2bkw_A 316 HGLTAVYVA--D-------------PPDVIAF-LKSHGVVIAGGIHKDI--GPKYIRIGHMGVTACNKNLPYMKNCFDLI 377 (385)
T ss_dssp SSCEEEECS--C-------------HHHHHHH-HHHTTEECBCCCCTTT--GGGEEEECCCGGGTSSTTCTHHHHHHHHH
T ss_pred CceEEEecC--C-------------HHHHHHH-HHHCCeEEeCCCCccc--CCCEEEEEccccccccCCHHHHHHHHHHH
Confidence 566775543 1 2334444 4578999999887642 34599999 65 5889999999999
Q ss_pred HHHHHH
Q 009517 521 TDFHKN 526 (533)
Q Consensus 521 ~~~l~~ 526 (533)
++++++
T Consensus 378 ~~~~~~ 383 (385)
T 2bkw_A 378 KLALQR 383 (385)
T ss_dssp HHHTTC
T ss_pred HHHHHh
Confidence 988754
No 139
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.97 E-value=3.8e-30 Score=269.11 Aligned_cols=332 Identities=14% Similarity=0.149 Sum_probs=222.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC-CCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE-NDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~-gd~Vl 219 (533)
|+++++++.+++.+. ..|....+..+++.++++++.+.++.. ..++|++|+|+++|++.+++.++..+ +++|+
T Consensus 79 ~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii 152 (451)
T 3oks_A 79 APKVVEAVRSQVGDF-----THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSALFNSGSEAVENAVKIARSHTHKPAVV 152 (451)
T ss_dssp CHHHHHHHHHHHTTC-----SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEEESSHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhc-----ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEE
Confidence 789999999998762 345555566777888888887765422 35799999999999999998876213 48999
Q ss_pred EcCCcCcchHHHHHHhCC--------------eEEEEecCCC--CC-CCC--------CHHHHHHHHHHHHhcCCCeeEE
Q 009517 220 CPIPQYPLYSASIALHGG--------------TLVPYYLDEA--TG-WGL--------ETSEVKKQLEAAKAKGITVRAL 274 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~--------------~~~~v~~~~~--~~-~~l--------d~~~l~~~i~~~~~~g~~~~~i 274 (533)
+.+++|+++...+...+. .+..+++... .. +++ +++.+++.+++.. +++..++
T Consensus 153 ~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~--~~~~~aa 230 (451)
T 3oks_A 153 AFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI--GADNLAA 230 (451)
T ss_dssp EETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT--CGGGEEE
T ss_pred EEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc--CCCCEEE
Confidence 999999998876665532 3445554310 00 011 3455556665321 1123445
Q ss_pred EEeCCCCCCc-c-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccC
Q 009517 275 VVINPGNPTG-Q-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (533)
Q Consensus 275 il~~p~NPtG-~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 352 (533)
+++.|.|++| . .++++.+++|+++|++||+++|+||+|.+|.+.|. ...+.. .++ .+| +.||||++
T Consensus 231 vi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~--~~~---~pd-----i~t~sK~l 298 (451)
T 3oks_A 231 VVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA--MFACEH--EGI---DPD-----LIVTAKGI 298 (451)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEEECGGG
T ss_pred EEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc--chhhhh--cCC---CCC-----eeeehhhh
Confidence 5566655544 4 55778899999999999999999999999876553 222211 112 455 44899999
Q ss_pred CCCCCCeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 353 YGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLED 431 (533)
Q Consensus 353 ~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 431 (533)
+. |+|+||+++ ++++++.+.+... .+++.++++|+++.++|+. .+. +.+.++++++++++++
T Consensus 299 -~~-G~~iG~v~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~-----------~~~-~~~~~~~~~~~~~l~~ 361 (451)
T 3oks_A 299 -AG-GLPLSAVTG---RAEIMDSPHVSGLGGTYGGNPIACAAALATIET-----------IES-EGLVARAQQIEKIMKD 361 (451)
T ss_dssp -GT-TSSCEEEEE---EHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHH-----------HHH-TTHHHHHHHHHHHHHH
T ss_pred -hC-CcceEEEEE---CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHH-----------Hhh-hhHHHHHHHHHHHHHH
Confidence 54 999999998 8999888765544 6789999999999888741 111 2334444445555554
Q ss_pred HHh----cCCCceEecCCceeEEecccCC-----CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceE
Q 009517 432 AFN----SLEGITCNKAEGAMYLFPRIQL-----PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHF 502 (533)
Q Consensus 432 ~L~----~~~g~~~~~~~gg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~i 502 (533)
.|. +++.+..+++.|.|+ |+.+.. |... ....++ +.|.++||.+.|+..|+. ++
T Consensus 362 ~L~~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~----------~~~~~~-~~l~~~Gv~v~~~~~~~~-----~i 424 (451)
T 3oks_A 362 RLGRLQAEDDRIGDVRGRGAMI-AMELVKAGTTEPDAD----------LTKALC-AGAHAAGVIVLSCGTYGN-----VV 424 (451)
T ss_dssp HHHHHHHHCTTEEEEEEETTEE-EEEEBSTTSCCBCHH----------HHHHHH-HHHHHTTEECEEECTTSC-----EE
T ss_pred HHHHHHhhCCCeEEEEEeeEEE-EEEEecCccCCCCHH----------HHHHHH-HHHHhCCcEEecCCCCCC-----EE
Confidence 444 456677777777654 443321 1110 123333 445568999999766542 89
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 503 RCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 503 Ris~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
||++. .++++|++++++|++++++
T Consensus 425 Ri~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 425 RFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 99874 7899999999999998863
No 140
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=1.7e-31 Score=277.73 Aligned_cols=333 Identities=15% Similarity=0.102 Sum_probs=220.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 219 (533)
|+++++++.+++.+. ...|.+.....+|++++++++. ..++|++|+|+++|+..+++.++. .++++|+
T Consensus 71 ~p~v~~A~~~~~~~~----~~~~~~~~~~~~l~~~la~~~~-------~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi 139 (429)
T 3k28_A 71 NDRVVEALKAVAERG----TSFGAPTEIENKLAKLVIERVP-------SIEIVRMVNSGTEATMSALRLARGYTGRNKIL 139 (429)
T ss_dssp CHHHHHHHHHHHHHC----SCCSSCCHHHHHHHHHHHHHST-------TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHhhC----cCcCCCCHHHHHHHHHHHHhCC-------CCCEEEEeCChHHHHHHHHHHHHHhhCCCEEE
Confidence 799999999999873 2233445557788888888752 468999999999999999998762 1568999
Q ss_pred EcCCcCcchHHHHHHh-CCeEEEEecCCCCCCC------------CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 220 CPIPQYPLYSASIALH-GGTLVPYYLDEATGWG------------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~------------ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
+.+|+|+++...+... |..+..++.....++. -|+++|+++++... .++++|+++.++|++|.+
T Consensus 140 ~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~ 216 (429)
T 3k28_A 140 KFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFG---DDIACVIVEPVAGNMGVV 216 (429)
T ss_dssp EEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCB
T ss_pred EECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcc
Confidence 9999999765433222 2222222111111110 18999999998531 156666666656667764
Q ss_pred C-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 287 L-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 287 ~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
. +++++++|+++|++||+++|+||+|.+| +.+. ...... .++ .++ +.+|||++ | .|+|+||+++
T Consensus 217 ~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~--~~~~~~--~~~---~~d-----i~t~sK~~-~-~G~~iG~~~~ 281 (429)
T 3k28_A 217 PPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY--NCGQGY--YGV---TPD-----LTCLGKVI-G-GGLPVGAYGG 281 (429)
T ss_dssp CCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST--THHHHH--HTC---CCS-----EEEECGGG-G-TTSCCEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc--chHHHH--hCC---CCc-----eehhhhhh-c-CCCCeEEEEE
Confidence 4 6888999999999999999999999998 5442 111111 122 455 55899999 5 4999999998
Q ss_pred ecCCHHHHHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----C
Q 009517 366 TGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----E 437 (533)
Q Consensus 366 ~~~~~~~~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~ 437 (533)
++++++.+.+. ...++++++++++++.++|+..+ +++.++++++++++++.|+++ +
T Consensus 282 ---~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-------------~~~~~~~~~~~~~l~~~L~~~~~~~~ 345 (429)
T 3k28_A 282 ---KAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-------------PESYVEFERKAEMLEAGLRKAAEKHG 345 (429)
T ss_dssp ---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-------------HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---cHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99998887553 22568899999999998886321 345556666666666666553 4
Q ss_pred CceEecCCceeEEecccCCCH-HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHH
Q 009517 438 GITCNKAEGAMYLFPRIQLPE-KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAI 516 (533)
Q Consensus 438 g~~~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~ 516 (533)
.+..+++.|.|+.|. +..+. ................++.. |.++||.+.||. .+.+|+++..++++++++
T Consensus 346 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~-------~~~~r~~~~~t~e~i~~~ 416 (429)
T 3k28_A 346 IPHHINRAGSMIGIF-FTDEPVINYDAAKSSNLQFFAAYYRE-MVEQGVFLPPSQ-------FEGLFLSTVHSDADIEAT 416 (429)
T ss_dssp CCCEEEEETTEEEEE-SSSSCCCSHHHHTTSCHHHHHHHHHH-HHHTTEECCSST-------TSCBCCCTTCCHHHHHHH
T ss_pred CCEEEEeeccEEEEE-EecCCcccccccccccHHHHHHHHHH-HHHCCeEEecCC-------CCCEEEECCCCHHHHHHH
Confidence 556677777766553 22110 00000000000012334444 456899999852 126799888999999999
Q ss_pred HHHHHHHHHHH
Q 009517 517 VTRLTDFHKNF 527 (533)
Q Consensus 517 ~~~l~~~l~~~ 527 (533)
+++|+++++++
T Consensus 417 l~~l~~~l~~~ 427 (429)
T 3k28_A 417 IAAAEIAMSKL 427 (429)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 141
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=1.6e-30 Score=267.29 Aligned_cols=312 Identities=12% Similarity=0.126 Sum_probs=219.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc-cCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-RSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~~gd~Vl 219 (533)
|+.+++++.+++..... ....| +.....+++++++++ +| .++++|++|+|+++|+..+++.+. ..+|++|+
T Consensus 63 ~~~v~~a~~~~~~~~~~-~~~~~-~~~~~~~l~~~la~~----~~--~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi 134 (395)
T 1vef_A 63 NPEVVEAVKRQAETLMA-MPQTL-PTPMRGEFYRTLTAI----LP--PELNRVFPVNSGTEANEAALKFARAHTGRKKFV 134 (395)
T ss_dssp CHHHHHHHHHHHHHCCC-CCTTS-CCHHHHHHHHHHHHT----SC--TTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEE
T ss_pred CHHHHHHHHHHHHhCCC-Ccccc-CCHHHHHHHHHHHHh----cC--CCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEE
Confidence 78999999988876321 11224 333355566666655 34 467899999999999999998762 02688999
Q ss_pred EcCCcCcc-hHHHHHHhCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccC
Q 009517 220 CPIPQYPL-YSASIALHGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (533)
Q Consensus 220 v~~p~~~~-~~~~~~~~g~~------------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~ 286 (533)
+++|+|++ +...+...|.+ +..++ ..|+++|++++++ ++++|++++++||||.+
T Consensus 135 ~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-------~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~ 201 (395)
T 1vef_A 135 AAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-------YNDVEALKRAVDE------ETAAVILEPVQGEGGVR 201 (395)
T ss_dssp EETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-------TTCHHHHHHHCCT------TEEEEEECSEETTTTSE
T ss_pred EEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-------CCcHHHHHHHhcc------CEEEEEEeCccCCCCcc
Confidence 99999976 44566666765 22222 2489999999875 78888877778999976
Q ss_pred -CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEE
Q 009517 287 -LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (533)
Q Consensus 287 -~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~ 365 (533)
.+++++++|+++|++||+++|+||+|.++.+.+. ..++.. .++ .+| +.||||++ +. |+|+||+++
T Consensus 202 ~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~--~~~~~~--~~~---~~d-----~~s~sK~~-~~-g~~~G~~~~ 267 (395)
T 1vef_A 202 PATPEFLRAAREITQEKGALLILDEIQTGMGRTGK--RFAFEH--FGI---VPD-----ILTLAKAL-GG-GVPLGVAVM 267 (395)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHH--HTC---CCS-----EEEECGGG-GT-TSSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc--hhHhhh--cCC---CCC-----EEEEcccc-cC-CCceEEEEe
Confidence 5788899999999999999999999998655442 112111 122 345 22889999 54 999999998
Q ss_pred ecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--ceEe
Q 009517 366 TGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG--ITCN 442 (533)
Q Consensus 366 ~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~~~~ 442 (533)
++++++.+..... .+++++++++.++.++|+ ..+. +.+.++++++++++.+.|++++. +...
T Consensus 268 ---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~-----------~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 332 (395)
T 1vef_A 268 ---REEVARSMPKGGHGTTFGGNPLAMAAGVAAIR-----------YLER-TRLWERAAELGPWFMEKLRAIPSPKIREV 332 (395)
T ss_dssp ---EHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHH-----------HHHH-HTTHHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred ---hHHHHhhhccCCcCCCcCCCHHHHHHHHHHHH-----------HHHh-CCHHHHHHHHHHHHHHHHHHhhcCceEEE
Confidence 7887776654322 456788889888887773 1122 34677788889999999988732 2223
Q ss_pred cCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHH
Q 009517 443 KAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRL 520 (533)
Q Consensus 443 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l 520 (533)
++. |.++|+.++. +...++..+++++||.+.|+ +.+++||++. .+++++++++++|
T Consensus 333 ~~~-g~~~~~~~~~--------------~~~~l~~~l~~~~gi~v~~~-------~~~~iRi~~~~~~~~~~i~~~~~~l 390 (395)
T 1vef_A 333 RGM-GLMVGLELKE--------------KAAPYIARLEKEHRVLALQA-------GPTVIRFLPPLVIEKEDLERVVEAV 390 (395)
T ss_dssp EEE-TTEEEEEESS--------------CSHHHHHHHHHHHCEECEES-------STTEEEECCCTTCCHHHHHHHHHHH
T ss_pred EEE-EEEEEEEEcC--------------hHHHHHHHHHHHCCeEEecC-------CCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 344 4566765541 13344555553789999985 2348999874 7889999999999
Q ss_pred HHHH
Q 009517 521 TDFH 524 (533)
Q Consensus 521 ~~~l 524 (533)
++++
T Consensus 391 ~~~l 394 (395)
T 1vef_A 391 RAVL 394 (395)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 142
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.97 E-value=1.8e-30 Score=270.09 Aligned_cols=319 Identities=12% Similarity=0.106 Sum_probs=212.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------- 212 (533)
++.+++++.+++.+... ....| +.....+|++.+++++ | .++|++++|+++|+..+++.+..
T Consensus 83 ~p~v~~ai~~~~~~~~~-~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~sGseA~~~al~~a~~~~~~~~g~ 152 (433)
T 1z7d_A 83 HPNILNAMINQAKNLTI-CSRAF-FSVPLGICERYLTNLL----G----YDKVLMMNTGAEANETAYKLCRKWGYEVKKI 152 (433)
T ss_dssp CHHHHHHHHHHHTTCSC-CCTTS-EEHHHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CHHHHHHHHHHHHhCCC-ccCCc-CCHHHHHHHHHHHhhc----C----CCeEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 78999999999876321 01123 1222445555555554 3 57999999999999999998641
Q ss_pred CCC-CeEEEcCCcCcchHHH-HHHhC------------CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC
Q 009517 213 SEN-DGILCPIPQYPLYSAS-IALHG------------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (533)
Q Consensus 213 ~~g-d~Vlv~~p~~~~~~~~-~~~~g------------~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~ 278 (533)
.+| ++|++++|+|+++... +...| ..+..+|. .|+++|+++++. +++++|+++.
T Consensus 153 ~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep 220 (433)
T 1z7d_A 153 PENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKD-----PNVCAFIVEP 220 (433)
T ss_dssp CTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHHHHHTS-----TTEEEEEECS
T ss_pred CCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEEC
Confidence 367 9999999999987543 33333 23344442 289999999942 1688877666
Q ss_pred CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 279 PGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 279 p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
.+|+||. +++++.+++|+++|++||+++|+||+|.+|.+.|. ...+.. .++ .+| +.||||.+ | +|
T Consensus 221 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~--~~~~~~--~~~---~~d-----i~t~sK~l-~-~G 286 (433)
T 1z7d_A 221 IQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK--LLCVHH--YNV---KPD-----VILLGKAL-S-GG 286 (433)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEEECGGG-G-TT
T ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc--chhhHh--cCC---CCC-----EEEECccc-c-CC
Confidence 6788997 47888999999999999999999999998766542 111111 111 456 34899999 5 69
Q ss_pred -CeeEEEEEecCCHHHHHHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 358 -KRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 358 -~riG~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
+|+||+++ ++++++.+.... ..++++++++++++.++|+ ..+. +.+.++++++++++.+.|++
T Consensus 287 ~~~~G~v~~---~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~-----------~~~~-~~~~~~~~~~~~~l~~~L~~ 351 (433)
T 1z7d_A 287 HYPISAVLA---NDDIMLVIKPGEHGSTYGGNPLAASICVEALN-----------VLIN-EKLCENAEKLGGPFLENLKR 351 (433)
T ss_dssp SSCCEEEEE---CHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHH-----------HHHH-TTHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEE---CHHHHhhhccccccccCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHHHHHHHHHHH
Confidence 99999998 888887775543 3667889999998888774 1111 24556677777777777765
Q ss_pred C----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CC
Q 009517 436 L----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQ 509 (533)
Q Consensus 436 ~----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~ 509 (533)
+ +.+..+++.|. ++|+.+.... .+...++..+ .++||.+.|+ +.+++||++. .+
T Consensus 352 l~~~~~~~~~~~~~g~-~~~i~~~~~~-----------~~~~~~~~~l-~~~Gv~v~~~-------~~~~iRi~~~~~~t 411 (433)
T 1z7d_A 352 ELKDSKIVRDVRGKGL-LCAIEFKNEL-----------VNVLDICLKL-KENGLITRDV-------HDKTIRLTPPLCIT 411 (433)
T ss_dssp HHTTCTTEEEEEEETT-EEEEEECTTT-----------CCHHHHHHHH-HHTTEECCEE-------TTTEEEECCCTTCC
T ss_pred HHHhCCCeEEEEeeee-EEEEEEccCh-----------hHHHHHHHHH-HHCCeEEecC-------CCCEEEEECCcCCC
Confidence 4 33344555555 4565554110 1234445454 4589999984 2338999875 79
Q ss_pred cCcHHHHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++|++++++|+++++++.++
T Consensus 412 ~e~i~~~l~~l~~~l~~~~~~ 432 (433)
T 1z7d_A 412 KEQLDECTEIIVKTVKFFDER 432 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999876544
No 143
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=6.1e-30 Score=267.67 Aligned_cols=327 Identities=13% Similarity=0.032 Sum_probs=225.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------C
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------E 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------~ 214 (533)
++++++++.+++.+... |....+..+...++++.+.+.++ ...++|++++|+++|++.+++.++.. +
T Consensus 93 ~p~v~~A~~~~~~~~~~-----~~~~~~~~~~~~~L~e~la~~~~--~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~ 165 (457)
T 3tfu_A 93 HPALDQALTTQLRVMNH-----VMFGGLTHEPAARLAKLLVDITP--AGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLP 165 (457)
T ss_dssp CHHHHHHHHHHHHHCSC-----CCSSSEECHHHHHHHHHHHHHSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhccC-----ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 78999999999987321 11111122334444444444443 45679999999999999999998621 5
Q ss_pred C-CeEEEcCCcCcchHHHHHHhCC--------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC-
Q 009517 215 N-DGILCPIPQYPLYSASIALHGG--------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN- 278 (533)
Q Consensus 215 g-d~Vlv~~p~~~~~~~~~~~~g~--------------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~- 278 (533)
| ++|++.+++|+++.......+. .+..++.........|+++|+++|++. +.++++|+++.
T Consensus 166 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~---~~~~aavi~ep~ 242 (457)
T 3tfu_A 166 GKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH---AGELAAVVVEPV 242 (457)
T ss_dssp TCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHH---GGGEEEEEECSS
T ss_pred CCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC---CCCEEEEEEeCC
Confidence 5 5899999999997766555521 222333322211124789999999853 12688888888
Q ss_pred CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 279 PGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 279 p~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
++||+|.++ +++.+++|+++|++||+++|+||+|.+|.+.|. ...+..+ ++ .+| +.||||+++ .|
T Consensus 243 ~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~--~~a~~~~--~~---~pd-----iit~sK~l~--gG 308 (457)
T 3tfu_A 243 VQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA--LFAADHA--GV---SPD-----IMCVGKALT--GG 308 (457)
T ss_dssp EECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHH--TC---CCS-----EEEECGGGG--TT
T ss_pred CcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc--hhHhHhc--CC---Cce-----EEEEChhhh--CC
Confidence 899999765 788899999999999999999999999876553 2222221 22 466 349999984 36
Q ss_pred -CeeEEEEEecCCHHHHHHHHHh------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 358 -KRGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLE 430 (533)
Q Consensus 358 -~riG~v~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 430 (533)
+|+||+++ ++++++.+... ...+++.++++++++.++|+. .+ .+.+.+++++++++++
T Consensus 309 ~~~lG~v~~---~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~-----------~~-~~~~~~~~~~~~~~l~ 373 (457)
T 3tfu_A 309 YLSLAATLC---TADVAHTISAGAAGALMHGPTFMANPLACAVSVASVEL-----------LL-GQDWRTRITELAAGLT 373 (457)
T ss_dssp SSCCEEEEE---EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHH-----------HH-TSCHHHHHHHHHHHHH
T ss_pred CcceEEEEE---cHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHH-----------Hh-hhHHHHHHHHHHHHHH
Confidence 79999998 99999988521 236788999999999888741 11 1234556667777777
Q ss_pred HHHhcC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 431 DAFNSL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 431 ~~L~~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
+.|+++ +++..+++.|.|+ ++.+..+ .+...++..+ .++||.+.|+ + +++||++.
T Consensus 374 ~~L~~l~~~~~v~~vr~~G~~~-~i~l~~~------------~~~~~~~~~l-~~~Gv~v~~~---~-----~~lRi~p~ 431 (457)
T 3tfu_A 374 AGLDTARALPAVTDVRVCGAIG-VIECDRP------------VDLAVATPAA-LDRGVWLRPF---R-----NLVYAMPP 431 (457)
T ss_dssp HHHGGGGGSTTEEEEEECSSCE-EEEESSC------------CCHHHHHHHH-HHTTEECCCB---T-----TEEEECCC
T ss_pred HHHHHHhcCCCeeeeecCCeEE-EEEECCc------------ccHHHHHHHH-HHCCeEEEec---C-----CEEEEECC
Confidence 777764 5677777777654 4444421 1234444454 4579999872 2 28999964
Q ss_pred --CCcCcHHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.++++|++++++|+++++++.
T Consensus 432 ~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 432 YICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999988653
No 144
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.97 E-value=3e-29 Score=257.09 Aligned_cols=316 Identities=14% Similarity=0.129 Sum_probs=229.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
++++++++.+.+... ...|.+..+..+||++++++++ . .+.|++++| ++|+..+++.+ . ++||+|+
T Consensus 16 ~~~~~~a~~~~l~~~----~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG-t~al~~~l~~l~~-~~gd~Vi 82 (388)
T 1b9h_A 16 DDAERNGLVRALEQG----QWWRMGGDEVNSFEREFAAHHG------A-AHALAVTNG-THALELALQVMGV-GPGTEVI 82 (388)
T ss_dssp CHHHHHHHHHHHHTS----CCBTTTCSHHHHHHHHHHHHTT------C-SEEEEESCH-HHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHHcC----CeeecCCHHHHHHHHHHHHHhC------C-CeEEEeCCH-HHHHHHHHHHcCC-CCcCEEE
Confidence 588999999988762 3457777889999999999985 2 246777766 89999999998 7 7899999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|+.+...+...|++++.++++++ +|.+|+++|++++++ ++++|+ |+||||.+.+ +++|+++|
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~la 149 (388)
T 1b9h_A 83 VPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTP------RTKVIM---PVHMAGLMAD---MDALAKIS 149 (388)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHH
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCccCcCC---HHHHHHHH
Confidence 9999999999999999999999999854 578999999999965 788777 9999999987 89999999
Q ss_pred HHcCCEEEEcccccc-ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH-H--HHH
Q 009517 300 KKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE-V--REQ 375 (533)
Q Consensus 300 ~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~-~--~~~ 375 (533)
++||+++|+|++|.. ..+.+. .+ ..+ . ++.+.||||.. +++|.|+||+++ +++ + ++.
T Consensus 150 ~~~~~~li~D~a~~~g~~~~~~----~~----~~~----~---~i~~~S~s~~K-~l~g~~~G~~~~---~~~~~~~~~~ 210 (388)
T 1b9h_A 150 ADTGVPLLQDAAHAHGARWQGK----RV----GEL----D---SIATFSFQNGK-LMTAGEGGAVVF---PDGETEKYET 210 (388)
T ss_dssp HHHTCCBCEECTTCTTCEETTE----EG----GGS----S---SCEEEECCTTS-SSCSSSCEEEEE---CTTCHHHHHH
T ss_pred HHcCCEEEEecchhcCCccCCe----ec----ccc----c---ceEEEEccCCC-cccCCCeEEEEE---CCHHHHHHHH
Confidence 999999999999985 334221 11 111 2 26788999665 556789999998 554 5 565
Q ss_pred HHHhhhc--------------cc--cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 376 IYKVASV--------------NL--CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 376 l~~~~~~--------------~~--~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
+...... .. ..+.+..+++...+ ++++++.++++++++++.+.|+++||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~--------------~~l~~~~~~~~~~~~~l~~~L~~~~~~ 276 (388)
T 1b9h_A 211 AFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL--------------ARLDEQIAVRDERWTLLSRLLGAIDGV 276 (388)
T ss_dssp HHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH--------------TTHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 5443211 01 13334333332222 334556777888899999999998888
Q ss_pred eEec------CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC----------CC------
Q 009517 440 TCNK------AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ----------VP------ 497 (533)
Q Consensus 440 ~~~~------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~----------~~------ 497 (533)
.+.. +.+++++|+.++..... +...++ +.|.++||.+.+|..-.. ..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~l~-~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (388)
T 1b9h_A 277 VPQGGDVRADRNSHYMAMFRIPGLTEE----------RRNALV-DRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAI 345 (388)
T ss_dssp EECCCCTTCCBCCCSEEEEECTTCCHH----------HHHHHH-HHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHH
T ss_pred cccCCCcCCCccceEEEEEEeCCcCcc----------cHHHHH-HHHHHCCCCcccccCccccChHhHhcCCCccccccc
Confidence 8765 45678888665421000 123344 445568999998753210 00
Q ss_pred ----------CCceEEEEec--C-CcCcHHHHHHHHHHHHHH
Q 009517 498 ----------GTWHFRCTIL--P-QEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 498 ----------g~~~iRis~~--~-~~e~i~~~~~~l~~~l~~ 526 (533)
..+.|||++. . ++++|+++++.|++++++
T Consensus 346 ~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 346 ARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0136999995 6 889999999999988764
No 145
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.97 E-value=6.5e-30 Score=267.27 Aligned_cols=335 Identities=12% Similarity=0.091 Sum_probs=215.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC---CC--
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS---EN-- 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~---~g-- 215 (533)
|+++++++.+++.+. ..|....+..+.++++++++.+.++ ...++|++|+|+++|+..+++.++.. +|
T Consensus 62 ~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~ 134 (448)
T 3dod_A 62 KKELDDAIKKQLGKI-----AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKP 134 (448)
T ss_dssp CHHHHHHHHHHHTTC-----SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc-----cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCC
Confidence 689999999998762 2344455566788888888887765 44689999999999999999998721 44
Q ss_pred --CeEEEcCCcCcchHHHHHHhCCe-------------EEEEecCCCCCCCC-----------CHHHHHHHHHHHHhcCC
Q 009517 216 --DGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGL-----------ETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 216 --d~Vlv~~p~~~~~~~~~~~~g~~-------------~~~v~~~~~~~~~l-----------d~~~l~~~i~~~~~~g~ 269 (533)
|+|++++|+|+++.......+.. +..++.. ..|.. |+++|+++|+.. ..
T Consensus 135 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~ 209 (448)
T 3dod_A 135 EKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRDQCLRELAQLLEEH---HE 209 (448)
T ss_dssp TCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHHHHHHHHHHHHHHH---GG
T ss_pred CCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhHHHHHHHHHHHHhC---CC
Confidence 99999999999877555444322 2223322 12222 488999999732 12
Q ss_pred CeeEEEEeCCC-CCCc-cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEec
Q 009517 270 TVRALVVINPG-NPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQS 347 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG-~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 347 (533)
++++|+++.++ |++| .+++++++++|+++|++||+++|+||+|++|.+.|. ...... .++ .++ +.+
T Consensus 210 ~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~a~~~--~~~---~~d-----i~t 277 (448)
T 3dod_A 210 EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGK--MFACEH--ENV---QPD-----LMA 277 (448)
T ss_dssp GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEE
T ss_pred CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--hhhhhh--cCC---CCC-----EEE
Confidence 57777777776 8888 567888899999999999999999999999876553 112111 122 455 457
Q ss_pred CCccCCCCCC-CeeEEEEEecCCHHHHHHHHH-------hhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHH
Q 009517 348 VSKGYYGECG-KRGGYMEVTGFSAEVREQIYK-------VAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGI 418 (533)
Q Consensus 348 ~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~-------~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~ 418 (533)
|||++ + .| +|+||+++ ++++++.+.+ ... .+++.++++++++.++|+.. +. .+.++.+
T Consensus 278 ~sK~l-~-~G~~~ig~v~~---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~-------~~-~~~~~~~ 344 (448)
T 3dod_A 278 AGKGI-T-GGYLPIAVTFA---TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALF-------ES-ENIVEQV 344 (448)
T ss_dssp ECGGG-G-TTSSCCEEEEE---EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHH-------HH-TTHHHHH
T ss_pred ecccc-c-CCcCceEEEEE---CHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHH-------hc-ccHHHHH
Confidence 89999 5 49 59999998 9999998865 333 67888999999998887410 00 0112223
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCC
Q 009517 419 LSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFG 494 (533)
Q Consensus 419 ~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~ 494 (533)
++..+..++.|.+ |.+++.+..+++.|.| +|+.+..... ....... ...++..+ .++||.+.|+.
T Consensus 345 ~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~--- 413 (448)
T 3dod_A 345 AEKSKKLHFLLQD-LHALPHVGDIRQLGFM-CGAELVRSKE-----TKEPYPADRRIGYKVSLKM-RELGMLTRPLG--- 413 (448)
T ss_dssp HHHHHHHHHHHHH-HTTSTTEEEEEEETTE-EEEEECSBTT-----TTBCCCGGGCHHHHHHHHH-HHTTEECCEET---
T ss_pred HHHHHHHHHHHHH-HhcCCCeEEEEeeeEE-EEEEEccCcc-----cccccchhhHHHHHHHHHH-HHCCcEEeccC---
Confidence 3333333444444 5455556666666664 4544431100 0000000 13444444 46799999851
Q ss_pred CCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHHH
Q 009517 495 QVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 495 ~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+++||++ ..++++|++++++|+++++++.
T Consensus 414 -----~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 414 -----DVIAFLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp -----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3899965 4889999999999999998765
No 146
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.97 E-value=4.5e-30 Score=264.43 Aligned_cols=314 Identities=18% Similarity=0.210 Sum_probs=230.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
++.+++++.+.+.. ..|.+..+..+|+++++++++ .+++++++|+++++..+++.+ + ++||+|+
T Consensus 43 ~~~v~~a~~~~~~~------~~y~~~~~~~~l~~~la~~~~--------~~~~v~~~~Gt~a~~~~l~~~~~-~~gd~vl 107 (399)
T 2oga_A 43 RAETDAAIARVLDS------GRYLLGPELEGFEAEFAAYCE--------TDHAVGVNSGMDALQLALRGLGI-GPGDEVI 107 (399)
T ss_dssp HHHHHHHHHHHHHH------TCCSSSHHHHHHHHHHHHHTT--------SSEEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHhc------CCCCCchhHHHHHHHHHHHHC--------CCeEEEecCHHHHHHHHHHHhCC-CCcCEEE
Confidence 57788888888764 247666788999999999974 236778888899999999998 7 7899999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|+.+...++..|.+++.++++++ ++.+|+++|++++++ ++++|+ |+||||.+.+ +++|+++|
T Consensus 108 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~l~ 174 (399)
T 2oga_A 108 VPSHTYIASWLAVSATGATPVPVEPHED-HPTLDPLLVEKAITP------RTRALL---PVHLYGHPAD---MDALRELA 174 (399)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCSS-SSSBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHH
T ss_pred ECCCccHHHHHHHHHCCCEEEEEecCCC-CCCcCHHHHHHhcCC------CCeEEE---EeCCcCCccC---HHHHHHHH
Confidence 9999999999999999999999998753 578999999999875 688777 6789999987 89999999
Q ss_pred HHcCCEEEEcccccccc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecC--CccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 300 KKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
+++|+++|+||+|..+. +++. . + .. ..+ +++.|| ||.+ |++| |+||+++ .++++++.+
T Consensus 175 ~~~~~~li~Dea~~~g~~~~~~-~------~-~~----~~d---i~~~S~~~sK~~-~~~G-~~g~~~~--~~~~~~~~l 235 (399)
T 2oga_A 175 DRHGLHIVEDAAQAHGARYRGR-R------I-GA----GSS---VAAFSFYPGKNL-GCFG-DGGAVVT--GDPELAERL 235 (399)
T ss_dssp HHHTCEECEECTTCTTCEETTE-E------T-TC----TTC---EEEEECCTTSSS-CCSS-CCEEEEE--SCHHHHHHH
T ss_pred HHcCCEEEEECcccccCccCCe-e------c-cc----ccC---EEEEeCCCCccC-CcCC-ceEEEEe--CCHHHHHHH
Confidence 99999999999998653 3221 1 0 00 133 778888 7998 7679 9999987 248888888
Q ss_pred HHhhhc-------------cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-
Q 009517 377 YKVASV-------------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN- 442 (533)
Q Consensus 377 ~~~~~~-------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~- 442 (533)
...... .+..+++.++++...++ .++.+.++.++.++++.+.|++++|+.+.
T Consensus 236 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~--------------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 301 (399)
T 2oga_A 236 RMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLA--------------HLDSWNGRRSALAAEYLSGLAGLPGIGLPV 301 (399)
T ss_dssp HHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHH--------------THHHHHHHHHHHHHHHHHHTTTCTTCBCCC
T ss_pred HHHHhcCccccccccccccCCCcCHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 765431 12346677666665552 22334455566678899999888887764
Q ss_pred cCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC-----------CCC----C-----CCceE
Q 009517 443 KAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF-----------GQV----P-----GTWHF 502 (533)
Q Consensus 443 ~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f-----------~~~----~-----g~~~i 502 (533)
.+.++.++|+.+..+. .+...+. +.|.++||.+.++... +.. + ..++|
T Consensus 302 ~~~~~~~~~~~~~~~~-----------~~~~~l~-~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l 369 (399)
T 2oga_A 302 TAPDTDPVWHLFTVRT-----------ERRDELR-SHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVL 369 (399)
T ss_dssp CCTTEECCCSSEEEEC-----------SSHHHHH-HHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEE
T ss_pred CCCCCcceeEEEEEEC-----------CCHHHHH-HHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEE
Confidence 3556666664333210 1233333 4456789999875421 000 0 02489
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 503 RCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 503 Ris~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
||++. .+++++++++++|+++++++
T Consensus 370 Ri~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 370 SLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp EECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred EccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99995 78999999999999988654
No 147
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=7.7e-31 Score=274.13 Aligned_cols=305 Identities=14% Similarity=0.116 Sum_probs=211.4
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHh
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALH 235 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~ 235 (533)
...|+ ..|.+ +++++++++.+.+|. +++++++||++|+..+++ ++ ++||+|+++.|+|+.+... +...
T Consensus 124 ~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt~al~~~l~-~~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~ 195 (464)
T 1ibj_A 124 PYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGMAALSAVTH-LI-KNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_dssp SCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHHHHHHHHHT-TS-CTTCEEEEESSCCHHHHHHHHHTSGGG
T ss_pred Ccccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHHHHHHHHHH-Hh-CCCCEEEEECCCchhHHHHHHHHHHHc
Confidence 45677 44565 788888888887773 477888888999998886 66 7999999999999998764 4567
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 236 g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
|++++.++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|...
T Consensus 196 G~~v~~v~~~-------d~~~l~~~i~~------~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g 259 (464)
T 1ibj_A 196 GVVVKRVNTT-------KLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSP 259 (464)
T ss_dssp TCEEEEECTT-------SHHHHHHHCCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCT
T ss_pred CCEEEEeCCC-------CHHHHHHHhcc------CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCccc
Confidence 9999998863 79999999875 7999999999999999997 999999999999999999999752
Q ss_pred cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHHHhhh-ccccCChHHHHH
Q 009517 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIYKVAS-VNLCSNISGQIL 393 (533)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~~~~~-~~~~~~~~~q~a 393 (533)
.. ..++ . + .. +|++.|+||+++|.+|+|+||+++ + +++++.+..... ...+.+++.+.+
T Consensus 260 ~~-----~~~~-~----~---~~---div~~S~sK~~~g~~Gl~~G~l~~---~~~~l~~~l~~~~~~~g~~~~~~~~~a 320 (464)
T 1ibj_A 260 VL-----SRPL-E----L---GA---DIVMHSATKFIAGHSDVMAGVLAV---KGEKLAKEVYFLQNSEGSGLAPFDCWL 320 (464)
T ss_dssp TT-----CCGG-G----T---TC---SEEEEETTTTTTCSSCCCCEEEEE---CSHHHHHHHHHHHHHTTCBCCHHHHHH
T ss_pred cc-----CChh-h----c---CC---EEEEECCcccccCCCCCcEEEEEE---ChHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 11 1111 1 1 23 388999999996556899999998 6 588888877654 456678888888
Q ss_pred HHHHcCCCCCCChhHHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCCceEecCC----ceeEEecccCCCHHHHHHHHh
Q 009517 394 ASLVMSPPKVGDESYESYCAERDGILSSLARR---AKTLEDAFNSLEGITCNKAE----GAMYLFPRIQLPEKAIKAAEA 466 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~L~~~~g~~~~~~~----gg~~~~~~~~~~~~~~~~~~~ 466 (533)
+...|+... ..++...+....+.+.++++ ++++.+.|+++|++.+..++ |++ +++.+.. ..
T Consensus 321 ~~~al~~~~---~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~-~~~~l~~-~~------- 388 (464)
T 1ibj_A 321 CLRGIKTMA---LRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSV-FSFITGS-VA------- 388 (464)
T ss_dssp HHHHHTTHH---HHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSE-EEEECSC-HH-------
T ss_pred HHhchhhHH---HHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceE-EEEEECC-HH-------
Confidence 888775311 11222222222222222111 12233445555677666654 444 4434431 00
Q ss_pred cCCCChHHHHHHHHHccceEEEcCC------------CCCCC--------CCCceEEEEecCCcCcHHHHHHHHHHHHHH
Q 009517 467 EKTVPDAFYCRRLLNATGIVLVPGS------------GFGQV--------PGTWHFRCTILPQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 467 ~~~~~~~~~~~~ll~~~gV~v~pg~------------~f~~~--------~g~~~iRis~~~~~e~i~~~~~~l~~~l~~ 526 (533)
....++ ..|+..||.+.+|. .++.. .+.++||||++. |++++++++|++++++
T Consensus 389 ----~~~~~~-~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 389 ----LSKHLV-ETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp ----HHHHHH-HHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHHHS
T ss_pred ----HHHHHH-HhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHhh
Confidence 012233 34556899998885 22211 123589999988 8899999999998764
No 148
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=2.1e-30 Score=262.77 Aligned_cols=316 Identities=13% Similarity=0.099 Sum_probs=215.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe--E
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG--I 218 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~--V 218 (533)
++++++++.+.+ ....|.+..+..+|+++++++++ . +..++++|+++++..+++.++ .+||+ |
T Consensus 28 ~p~v~~ai~~~~------~~~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~g~~a~~~a~~~~~-~~g~~~vv 92 (359)
T 3pj0_A 28 LTEALQNIDDNL------ESDIYGNGAVIEDFETKIAKILG------K--QSAVFFPSGTMAQQIALRIWA-DRKENRRV 92 (359)
T ss_dssp HHHHTTTSCTTC------BCCBTTBSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHH-HHHTCCEE
T ss_pred CHHHHHHHHhhc------ccCcccCCHHHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHHH-hcCCCcEE
Confidence 456666555422 23467777788999999999975 2 223555788899999999988 67776 4
Q ss_pred EEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC-ccCCCHHHHHH
Q 009517 219 LCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRA 294 (533)
Q Consensus 219 lv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt-G~~~s~~~l~~ 294 (533)
+++.++|..+. ......|.+++.++.+ ++.+|+++|+++ .+ ++++|++++||||| |.+++.+++++
T Consensus 93 i~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~ 162 (359)
T 3pj0_A 93 AYHPLSHLEIHEQDGLKELQQITPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEK 162 (359)
T ss_dssp EECTTCHHHHSSTTHHHHHHCCEEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred EEeccceeeehhcchHHHhcCceEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHH
Confidence 44444433221 2235679999988863 468999999987 33 79999999999998 79999999999
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
|+++|++||++||+|++|..+..... ..+...+.. ..+ +++.||||++ +.++ . ||++. ++++++
T Consensus 163 l~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~-----~~d---~~~~s~sK~~-~~~~-g-g~~~~---~~~l~~ 226 (359)
T 3pj0_A 163 ISEYCHEQGISLHLDGARLWEITPFY--QKSAEEICA-----LFD---SVYVSFYKGI-GGIA-G-AILAG---NDDFVQ 226 (359)
T ss_dssp HHHHHHHHTCEEEEEETTCGGGHHHH--TCCHHHHHT-----TCS---EEEEESSSTT-CCSS-C-EEEEE---CHHHHH
T ss_pred HHHHHHHcCCEEEEECcchhcchhhh--CCCHHHhhc-----cCC---EEEEeccccC-CCcc-e-EEEEC---CHHHHH
Confidence 99999999999999999865332110 012222221 123 4456999998 4332 2 78877 999999
Q ss_pred HHHHhhh-ccccC--ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-cCCceeEE
Q 009517 375 QIYKVAS-VNLCS--NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN-KAEGAMYL 450 (533)
Q Consensus 375 ~l~~~~~-~~~~~--~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~gg~~~ 450 (533)
.+..... ...+. ....+.++...++ ... +..+++.++++++.+.|++++|+.+. .+.++.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~-------------~~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 292 (359)
T 3pj0_A 227 EAKIWKRRYGGDLISLYPYILSADYYFE-------------KRI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMF 292 (359)
T ss_dssp HHHHHHHHTTCCCSCCHHHHHHHHHHHH-------------HHG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEE
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHH-------------HHH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEE
Confidence 9876543 22122 2222222223331 112 23345677888999999999899885 56677778
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-----CCcCcHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-----PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-----~~~e~i~~~~~~l~~~ 523 (533)
|++++.+... +...+.+.|.++||.+.||..|+. ++.+++|++++ .+.+++++++++|.++
T Consensus 293 ~~~~~~~~~~-----------~~~~l~~~l~~~GV~v~~g~~~~~-~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 293 HVYFENSADE-----------IGAILTKIQDETGVGISGYLQEKS-ADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EEEESSCHHH-----------HHHHHHHHHHHHCEECCSCCEEEE-TTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred EEEecCccch-----------hHHHHHHHHHhcCcEecCCccccC-CCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 8777654321 122244667789999999988873 56679999885 4667788888887764
No 149
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=6.5e-30 Score=258.97 Aligned_cols=300 Identities=15% Similarity=0.125 Sum_probs=209.2
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC--eEEEcCCcCcchH---HHHHH
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND--GILCPIPQYPLYS---ASIAL 234 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd--~Vlv~~p~~~~~~---~~~~~ 234 (533)
...|++..+..+|+++++++++ . +..++++|+++++..+++++. .+|| .|+++.++|..+. .....
T Consensus 40 ~~~y~~~~~~~~l~~~la~~~~------~--~~~i~~~~G~~a~~~al~~~~-~~gd~~~vi~~~~~~~~~~~~~~~~~~ 110 (357)
T 3lws_A 40 SDQYGTGAIIEPFEQKFADVLG------M--DDAVFFPSGTMAQQVALRIWS-DETDNRTVAYHPLCHLEIHEQDGLKEL 110 (357)
T ss_dssp CEETTEETTHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHH-HHHTCCEEEECTTCHHHHSSTTHHHHH
T ss_pred cccccCChHHHHHHHHHHHHhC------C--CcEEEecCcHHHHHHHHHHHh-hcCCCcEEEecccceeeeeccchhhhc
Confidence 4568877778999999999975 2 334555777889999999987 6787 6666666544322 24556
Q ss_pred hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 009517 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (533)
Q Consensus 235 ~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt-G~~~s~~~l~~i~~l~~~~~~~lI~De~y~ 313 (533)
.|++++.++.+ ++.+|+++|+++ . ++++|++++||||| |.+++.+++++|+++|++||++||+||+|.
T Consensus 111 ~g~~~~~v~~~---~~~~d~~~l~~~--~------~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 179 (357)
T 3lws_A 111 HPIETILVGAA---DRLMTLDEIKAL--P------DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARL 179 (357)
T ss_dssp SSCEEEECSCT---TSCCCHHHHHTC--C------SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTH
T ss_pred cCcEEEEecCC---CCCcCHHHHhcC--c------CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchh
Confidence 69999888742 457999999886 2 48899999999998 999999999999999999999999999986
Q ss_pred cc--cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-cc--ccCCh
Q 009517 314 EN--VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VN--LCSNI 388 (533)
Q Consensus 314 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~--~~~~~ 388 (533)
.. .+.+. +...+.. ..+ +++.||||+++|+.| ||+++ ++++++.+.+... .. .....
T Consensus 180 ~~~~~~~~~----~~~~~~~-----~~d---~~~~s~sK~~~~~~g---g~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 241 (357)
T 3lws_A 180 FEMLPYYEK----TAAEIAG-----LFD---SIYISFYKGLGGIAG---AILAG---PAAFCQTARIWKRRYGGDLISLY 241 (357)
T ss_dssp HHHHHHHTC----CHHHHHT-----TSS---EEEEESSSTTCCSSC---EEEEE---CHHHHHHHHHHHHHTTCCCSCCH
T ss_pred hhhhhhcCC----ChHHHHh-----cCC---EEEEeccccCCCCce---EEEEc---CHHHHHHHHHHHHHhcCCcccch
Confidence 21 12121 2222221 123 347899999854434 99988 9999998876653 21 12222
Q ss_pred HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-cCCceeEEecccCCCHHHHHHHHhc
Q 009517 389 SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN-KAEGAMYLFPRIQLPEKAIKAAEAE 467 (533)
Q Consensus 389 ~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~gg~~~~~~~~~~~~~~~~~~~~ 467 (533)
..+.++...|+ . +.+. .+++.++++++.+.|++++|+.+. .+.+++|+|++++.+...
T Consensus 242 ~~~~~~~~~l~----------~---~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~------- 300 (357)
T 3lws_A 242 PYIVSADYYYE----------L---RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAAD------- 300 (357)
T ss_dssp HHHHHHHHHHH----------H---HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHH-------
T ss_pred HHHHHHHHHHH----------H---HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHH-------
Confidence 33333333332 1 1222 234677788999999999899884 577788899877643210
Q ss_pred CCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-----CCcCcHHHHHHHHHHHH
Q 009517 468 KTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-----PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 468 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-----~~~e~i~~~~~~l~~~l 524 (533)
+... +.+.|.++||.+.||..|+ ++..++|++++ .+.++|++++++|.+++
T Consensus 301 ---~~~~-~~~~l~~~Gi~v~~g~~~~--~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 301 ---ISPK-LEQVQEETGLGFVGYLVDK--DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp ---HHHH-HHHHHHHHCEESCSCCEEC--SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred ---HHHH-HHHHHHhcCeEEecccccC--CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 1223 3456778999999997665 45568999985 46677888888887764
No 150
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=1.2e-29 Score=264.45 Aligned_cols=315 Identities=12% Similarity=0.101 Sum_probs=222.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc--------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------- 212 (533)
|+++++++.+++.+... ....|. .....+|++.+++++ | .++|++++|+++|+..+++.++.
T Consensus 94 ~p~v~~Ai~~~~~~~~~-~~~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~sGseA~~~al~~~~~~~~~~~g~ 163 (439)
T 2oat_A 94 HPKIVNALKSQVDKLTL-TSRAFY-NNVLGEYEEYITKLF----N----YHKVLPMNTGVEAGETACKLARKWGYTVKGI 163 (439)
T ss_dssp CHHHHHHHHHHHTTCSC-CCTTSE-ESSHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhcCc-ccCccC-CHHHHHHHHHHHHhc----C----CCEEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 79999999999876321 111232 223567777777765 3 57899999999999999998751
Q ss_pred CCC-CeEEEcCCcCcchHH-HHHHhC------------CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC
Q 009517 213 SEN-DGILCPIPQYPLYSA-SIALHG------------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (533)
Q Consensus 213 ~~g-d~Vlv~~p~~~~~~~-~~~~~g------------~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~ 278 (533)
.+| ++|++++|+|+++.. .+...| ..++.+|. .|+++|+++++. +++++|+++.
T Consensus 164 ~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep 231 (439)
T 2oat_A 164 QKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQD-----PNVAAFMVEP 231 (439)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTTS-----TTEEEEEECS
T ss_pred CCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEEC
Confidence 256 899999999998654 434334 35555553 289999999852 1677777666
Q ss_pred CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC
Q 009517 279 PGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (533)
Q Consensus 279 p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G 357 (533)
.+|+||. +++++.+++|.++|++||+++|+||+|.+|.+.|. ...+.. ..+ .+| +.||||++ | +|
T Consensus 232 ~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~--~~~~~~--~~~---~~D-----i~t~sK~l-~-~G 297 (439)
T 2oat_A 232 IQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR--WLAVDY--ENV---RPD-----IVLLGKAL-S-GG 297 (439)
T ss_dssp SBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGG--GTC---CCS-----EEEECGGG-G-TT
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc--chhHHH--hCC---CCc-----EEEecccc-c-CC
Confidence 6788996 67899999999999999999999999998766543 111111 111 356 33999999 5 48
Q ss_pred -CeeEEEEEecCCHHHHHHHHHhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009517 358 -KRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNS 435 (533)
Q Consensus 358 -~riG~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 435 (533)
+|+||+++ ++++++.+.... ..++++++++++++.++|+ ..+. +.+.++++++++++.+.|++
T Consensus 298 ~~~~G~v~~---~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~-----------~~~~-~~~~~~~~~~~~~l~~~L~~ 362 (439)
T 2oat_A 298 LYPVSAVLC---DDDIMLTIKPGEHGSTYGGNPLGCRVAIAALE-----------VLEE-ENLAENADKLGIILRNELMK 362 (439)
T ss_dssp SSCCEEEEE---CHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHH-----------HHHH-TTHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEE---CHHHHhccCCCCcccCCCcCHHHHHHHHHHHH-----------HHhh-hhHHHHHHHHHHHHHHHHHH
Confidence 99999998 888887775543 3667889999998888774 1111 34667788889999999988
Q ss_pred CCCce---EecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCc
Q 009517 436 LEGIT---CNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQE 510 (533)
Q Consensus 436 ~~g~~---~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~ 510 (533)
+ ++. .+++.|. ++|+.+.... + .+...++..+ .++||.+.|+ +.+++||++. .++
T Consensus 363 l-~~~~~~~~~~~g~-~~~v~l~~~~---------~-~~~~~l~~~l-~~~Gv~v~~~-------~~~~iRi~~~~~~t~ 422 (439)
T 2oat_A 363 L-PSDVVTAVRGKGL-LNAIVIKETK---------D-WDAWKVCLRL-RDNGLLAKPT-------HGDIIRFAPPLVIKE 422 (439)
T ss_dssp S-CTTTEEEEEEETT-EEEEEECCCS---------S-CCHHHHHHHH-HHTTEECCBS-------SSSEEEECCCTTCCH
T ss_pred h-cCCCcEEEEeeee-EEEEEEecCc---------c-HHHHHHHHHH-HHCCeEEecC-------CCCEEEEECccCCCH
Confidence 7 433 3445554 5565554210 0 1234445454 4579999973 2348999874 789
Q ss_pred CcHHHHHHHHHHHHHH
Q 009517 511 DKIPAIVTRLTDFHKN 526 (533)
Q Consensus 511 e~i~~~~~~l~~~l~~ 526 (533)
+++++++++|++++++
T Consensus 423 e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 423 DELRESIEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 151
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=3.2e-29 Score=257.92 Aligned_cols=190 Identities=14% Similarity=0.180 Sum_probs=153.8
Q ss_pred CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEE
Q 009517 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLV 240 (533)
Q Consensus 165 ~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~ 240 (533)
+..+..+++++++++++ . ++++++++|++|+..+++.+. ++||+|+++.|+|+++...+ ...|.+++
T Consensus 62 ~~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~ 132 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLER------G--EAGLATASGISAITTTLLTLC-QQGDHIVSASAIYGCTHAFLSHSMPKFGINVR 132 (398)
T ss_dssp CCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEE
T ss_pred CChHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEE
Confidence 34556778888887764 2 256666667799999999998 79999999999999988776 77899999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCC
Q 009517 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (533)
Q Consensus 241 ~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~ 320 (533)
.++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|..+.+. .
T Consensus 133 ~v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~ 195 (398)
T 2rfv_A 133 FVDAA-------KPEEIRAAMRP------ETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQ-Q 195 (398)
T ss_dssp EECTT-------SHHHHHHHCCT------TEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C
T ss_pred EeCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C
Confidence 98864 79999999876 7999999999999999998 999999999999999999999876552 1
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHH-HHHHhhh-c-cccCChHHHHHHHH
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVAS-V-NLCSNISGQILASL 396 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~-~l~~~~~-~-~~~~~~~~q~a~~~ 396 (533)
+ + .+ ..+ +++.|+||.+ +.+|+|+ ||+++ ++++++ .+..... . +.+.+++.+.++.+
T Consensus 196 -~---~-----~~---~~d---i~~~s~sK~~-~~~g~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 2rfv_A 196 -P---L-----QL---GAD---IVVHSVTKYI-NGHGDVIGGIIVG---KQEFIDQARFVGLKDITGGCMSPFNAWLTLR 256 (398)
T ss_dssp -G---G-----GG---TCS---EEEEETTTTT-TCSSCCCCEEEEE---CHHHHHHHHHTHHHHTTCCCCCHHHHHHHHH
T ss_pred -c---h-----hh---CCc---EEEEeCcccc-cCCCCceEEEEEE---CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHh
Confidence 1 1 11 233 8899999998 6799998 99998 888876 5655544 3 46788889988888
Q ss_pred HcC
Q 009517 397 VMS 399 (533)
Q Consensus 397 ~L~ 399 (533)
.|+
T Consensus 257 ~l~ 259 (398)
T 2rfv_A 257 GVK 259 (398)
T ss_dssp HHT
T ss_pred hhh
Confidence 875
No 152
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.97 E-value=6.1e-29 Score=251.82 Aligned_cols=316 Identities=14% Similarity=0.139 Sum_probs=225.4
Q ss_pred CCCHHHHHHHHHHHhcCCCCCccccC-CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 139 LFSADSIERAWQILDQIPGRATGAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 139 ~~p~~v~~~~~~~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
.+|+++++++.+.+.+. ..+|. ...+..++.+.+.+.+.+.+|.+ ++++|++|+|+++++..+++.+. .+ +.
T Consensus 14 ~~~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~~l~-~~-~~ 86 (362)
T 3ffr_A 14 ELYPTVRQHMITALDEK----IGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERIIQNCV-EK-KS 86 (362)
T ss_dssp CCCTTHHHHHHHHHHTT----TTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHHHHC-SS-EE
T ss_pred CCCHHHHHHHHHHhcCC----ccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHHhcc-CC-cE
Confidence 34889999988887752 21111 22234466666666666666643 46789999999999999999998 66 55
Q ss_pred EEEcCCcCcc-hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 218 ILCPIPQYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 218 Vlv~~p~~~~-~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+++..+.|.. +...+...|++++.++.+. ++.+|+++|+ +++ ++++|++++|+||||.+++ +++|+
T Consensus 87 i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~--~~~------~~~~v~~~~~~nptG~~~~---l~~i~ 153 (362)
T 3ffr_A 87 FHCVNGSFSKRFYEFAGELGREAYKEEAAF--GKGFYPADIT--VPA------DAEIICLTHNETSSGVSMP---VEDIN 153 (362)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCGGGCC--CCT------TCCEEEEESEETTTTEECC---HHHHT
T ss_pred EEEcCcHHHHHHHHHHHHhCCCeEEEecCC--CCCCCHHHHh--ccC------CccEEEEEcCCCCcceeCC---HHHHH
Confidence 5566666662 3446677899999999864 5688999998 433 7999999999999999999 88899
Q ss_pred HHHHHc-CCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 297 DFCKKE-GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 297 ~l~~~~-~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
++|++| |+++|+|++|..+.... . +. ..+ +++.|+||++++++|+ |++++ ++++++.
T Consensus 154 ~la~~~p~~~li~D~a~~~~~~~~-----~-------~~--~~d---~~~~s~~K~~~~~~G~--g~~~~---~~~~~~~ 211 (362)
T 3ffr_A 154 TFRDKNKDALIFVDAVSSLPYPKF-----D-------WT--KID---SVFFSVQKCFGLPAGL--GVWIL---NDRVIEK 211 (362)
T ss_dssp TSGGGSTTSEEEEECTTTTTSSCC-----C-------TT--SCS---EEEEETTSTTCCCSCC--EEEEE---EHHHHHH
T ss_pred HHHHhCCCCEEEEecccccCCccc-----C-------hh--HCc---EEEEecccccCCCCce--EEEEE---CHHHHHH
Confidence 999999 99999999997532211 0 00 122 7789999999547785 66666 8888887
Q ss_pred HHHhhh----------------------ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 009517 376 IYKVAS----------------------VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLARRAKTLEDA 432 (533)
Q Consensus 376 l~~~~~----------------------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 432 (533)
+.+... ..++++..++.++..+++ ...+ .++++.++++++++++.+.
T Consensus 212 ~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~~~~~~~~~~~~~~~~l~~~ 281 (362)
T 3ffr_A 212 SKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTG----------DMLQISADGIRKQTEEKAALINTY 281 (362)
T ss_dssp HHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHH----------HHHHccHHHHHHHHHHHHHHHHHH
Confidence 776532 135566777766666652 1111 1567888899999999999
Q ss_pred HhcCCCceEecC----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 433 FNSLEGITCNKA----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 433 L~~~~g~~~~~~----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
|+++||+.+..+ ..+.++|+.++. +...+... |.++||.+.||..+. +.++|||++.
T Consensus 282 L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~-l~~~gi~~~~g~~~~---~~~~iRis~~~ 343 (362)
T 3ffr_A 282 IESSKVFSFGVEDAKLRSMTTIVANTTM--------------LPGEINKI-LEPFDMAVGAGYGSK---KETQIRIANFP 343 (362)
T ss_dssp HHHCSSEEESSSCGGGBCSSEEEEEESS--------------CHHHHHHH-HGGGTEEEEECSGGG---TTTEEEEECCT
T ss_pred HHHccCceeccCChhhcCCceEEEecCC--------------CHHHHHHH-HHHCCeEEecCcccc---CCCEEEEECCC
Confidence 999989888763 234556654431 23444444 555699999986543 2349999996
Q ss_pred -CCcCcHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l 524 (533)
.+++++++++++|++++
T Consensus 344 ~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 344 AHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TSCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 68888999998888753
No 153
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=2.7e-29 Score=262.66 Aligned_cols=328 Identities=14% Similarity=0.132 Sum_probs=223.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCC-cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHS-QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------ 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------ 213 (533)
|+++++++.+++.+.. |... .+..++++++++.+.+.++ .++++|++|+|+++|+..+++.+. .
T Consensus 68 ~~~v~~a~~~~~~~~~------~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggsea~~~al~~~~-~~~~~~g 138 (449)
T 3a8u_X 68 RKEIQEAVAKQLSTLD------YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSECALTAVKMVR-AYWRLKG 138 (449)
T ss_dssp CHHHHHHHHHHTTTCS------CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHHHHHHHHHHHH-HHHHHTT
T ss_pred CHHHHHHHHHHHHhCC------CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHH-HHHHhcC
Confidence 6899999998887521 2111 2334556666666665544 467899999999999999999876 3
Q ss_pred --CCCeEEEcCCcCcchHH-HHHHhCC------------eEEEEecCC--CCCC-CCC--------HHHHHHHHHHHHhc
Q 009517 214 --ENDGILCPIPQYPLYSA-SIALHGG------------TLVPYYLDE--ATGW-GLE--------TSEVKKQLEAAKAK 267 (533)
Q Consensus 214 --~gd~Vlv~~p~~~~~~~-~~~~~g~------------~~~~v~~~~--~~~~-~ld--------~~~l~~~i~~~~~~ 267 (533)
++|+|++.+|+|+++.. .+...|. .+..++... ..+| ++| +++|+++|++..
T Consensus 139 ~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~-- 216 (449)
T 3a8u_X 139 QATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD-- 216 (449)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--
T ss_pred CCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--
Confidence 67999999999998654 4444432 234444321 1111 356 999999997531
Q ss_pred CCCeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEe
Q 009517 268 GITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 346 (533)
..++++|+++..+||||. +.+++++++|+++|++||+++|+||+|++|.+.|. ...+..+ .+ .+| +.
T Consensus 217 ~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~~~~--~~---~~d-----i~ 284 (449)
T 3a8u_X 217 ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS--MFGADSF--GV---TPD-----LM 284 (449)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSHHHHH--TC---CCS-----EE
T ss_pred CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc--chhhhhc--CC---CCC-----EE
Confidence 015666665544678996 66799999999999999999999999998765442 1222111 22 355 33
Q ss_pred cCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHh----------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHH
Q 009517 347 SVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV----------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (533)
Q Consensus 347 S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~----------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 415 (533)
||||++ + +| +|+||+++ ++++++.+... ...++++++++++++.++|+ ..+.
T Consensus 285 s~sK~l-~-~G~~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~-----------~~~~- 347 (449)
T 3a8u_X 285 CIAKQV-T-NGAIPMGAVIA---STEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALC-----------LLQK- 347 (449)
T ss_dssp EECGGG-G-TTSSCCEEEEE---EHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHH-----------HHHH-
T ss_pred EEcccc-c-CCCCceEEEEE---CHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHH-----------HHHh-
Confidence 899999 5 47 99999998 88999888763 12467789999988888773 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhcC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCC--ChHHHHHHHHHccceEEEcC
Q 009517 416 DGILSSLARRAKTLEDAFNSL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV--PDAFYCRRLLNATGIVLVPG 490 (533)
Q Consensus 416 ~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gV~v~pg 490 (533)
+.+.++++++++++++.|+++ +.+..+++.| .++|+.+..... .. +...+...++ ++||.+.|+
T Consensus 348 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~---------~~~~~~~~~~~~l~-~~Gv~v~~~ 416 (449)
T 3a8u_X 348 ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFG-LAGAIQIAPRDG---------DAIVRPFEAGMALW-KAGFYVRFG 416 (449)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEET-TEEEEEECCBTT---------BSSHHHHHHHHHHH-HHTEECEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeE-EEEEEEEecCcc---------cccccHHHHHHHHH-HCCcEEecC
Confidence 245667788888888888775 2233344544 567766542110 00 1123444544 679999985
Q ss_pred CCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHH
Q 009517 491 SGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 491 ~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~ 527 (533)
. +++||++ ..+++++++++++|+++++++
T Consensus 417 g--------~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 417 G--------DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp T--------TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred C--------CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1 3899996 489999999999999988753
No 154
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.97 E-value=2.5e-29 Score=253.62 Aligned_cols=317 Identities=14% Similarity=0.147 Sum_probs=215.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 220 (533)
++.+.+++.+... ....|.+..+..+||+++|++++ .+++++++|+++++..+++.+. ++||+|++
T Consensus 17 ~~~~~~a~~~~~~-----~~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~~~~~~~-~~gd~Vl~ 82 (347)
T 1jg8_A 17 TEEMRKAMAQAEV-----GDDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQVSIMAHT-QRGDEVIL 82 (347)
T ss_dssp CHHHHHHHHTCCC-----CCGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHhcCCC-----CCcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHHHHHHHHhc-CCCCEEEE
Confidence 4666666543321 13468888889999999999985 2467888888999999999988 89999999
Q ss_pred cCCcCcc-hH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC-ccCCCHHHHHHHH
Q 009517 221 PIPQYPL-YS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIV 296 (533)
Q Consensus 221 ~~p~~~~-~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt-G~~~s~~~l~~i~ 296 (533)
++|+|.. |. ..+...|++++.+ .+ .++.+|+++|++++++....++++++|++++||||| |.+++.+++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~ 159 (347)
T 1jg8_A 83 EADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEIC 159 (347)
T ss_dssp ETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHH
T ss_pred cCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHH
Confidence 9999865 32 3567789999888 43 245689999999886310001258999999999999 9999999999999
Q ss_pred HHHHHcCCEEEEccccccc--cccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE-EEEecCCHHHH
Q 009517 297 DFCKKEGLVLLADEVYQEN--VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY-MEVTGFSAEVR 373 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~-v~~~~~~~~~~ 373 (533)
++|++||+++|+||+|... .+.+. +...+... .+ .++.|+||++ ++ ++|| ++. +++++
T Consensus 160 ~~a~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~-----~d---~~~~s~sK~l-~~---~~G~~~~~---~~~~~ 220 (347)
T 1jg8_A 160 TIAKEHGINVHIDGARIFNASIASGV----PVKEYAGY-----AD---SVMFCLSKGL-CA---PVGSVVVG---DRDFI 220 (347)
T ss_dssp HHHHHHTCEEEEEETTHHHHHHHHCC----CHHHHHHT-----CS---EEEEESSSTT-CC---SSCEEEEE---CHHHH
T ss_pred HHHHHCCCEEEeehhhhhcchhhcCC----ChHHhccc-----cc---EEEEeccccc-CC---CceEEEEc---CHHHH
Confidence 9999999999999987521 12221 22222211 23 2345899988 43 3674 555 88888
Q ss_pred HHHHHhhh-cc--ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-cCCceeE
Q 009517 374 EQIYKVAS-VN--LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN-KAEGAMY 449 (533)
Q Consensus 374 ~~l~~~~~-~~--~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~gg~~ 449 (533)
+.+..+.. .. ...+...+.++...|+.. . +.+. +..++++.+.+.|+++ |+.+. .+..+.|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~---~~~~-~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~ 285 (347)
T 1jg8_A 221 ERARKARKMLGGGMRQAGVLAAAGIIALTKM----------V---DRLK-EDHENARFLALKLKEI-GYSVNPEDVKTNM 285 (347)
T ss_dssp HHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS----------S---TTHH-HHHHHHHHHHHHHHHH-TCBCCGGGCCSSE
T ss_pred HHHHHHHHHcCCchhHHHHHHHHHHHHHHHH----------H---HHHH-HHHHHHHHHHHHHHhc-CceeccCCCcceE
Confidence 88766543 22 223445555555554311 1 1122 2234567788888877 77652 3444556
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+|++++.. + . +...++..+ .++||.+.|+. .+++||++. .+++++++++++|+++++++
T Consensus 286 ~~~~~~~~-~---------~-~~~~~~~~l-~~~gi~v~~~~-------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 286 VILRTDNL-K---------V-NAHGFIEAL-RNSGVLANAVS-------DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp EEEECTTS-S---------S-CHHHHHHHH-HHHTEECEEEE-------TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcccc-c---------C-CHHHHHHHH-HHCCCEEecCC-------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 88655310 0 1 234455555 56899999742 238999985 68999999999999988653
No 155
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.97 E-value=3.3e-28 Score=252.51 Aligned_cols=318 Identities=14% Similarity=0.096 Sum_probs=227.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC-CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
|+.+++++.+.+.. ..|++ ..+..+||++++++++ .++|++|+|+++++..+++.+. +||+|+
T Consensus 31 p~~~~~a~~~~~~~------~~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~l~~l~--~gd~Vl 94 (424)
T 2po3_A 31 RARLYERLDRALDS------QWLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQLLAHAAG--LTGEVI 94 (424)
T ss_dssp HHHHHHHHHHHHHH------TCCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHHT--CCSEEE
T ss_pred hHHHHHHHHHHHhc------CCcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcC--CCCEEE
Confidence 57888888888765 14877 7889999999999985 2589999999999999999985 689999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
+++|+|+.+...+...|++++.+++++ .+|.+|+++|++++++ ++++|++++ |||...+ +++|+++|
T Consensus 95 v~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~---~tG~~~~---l~~i~~la 161 (424)
T 2po3_A 95 MPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTP------RTSAVVGVH---LWGRPCA---ADQLRKVA 161 (424)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCT------TEEEEEEEC---GGGCCCC---HHHHHHHH
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCc------CCcEEEEEC---CCCCcCC---HHHHHHHH
Confidence 999999999999999999999999975 3678999999998875 789998864 8998765 99999999
Q ss_pred HHcCCEEEEccccc-cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-HHHHHHHH
Q 009517 300 KKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQIY 377 (533)
Q Consensus 300 ~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~~~~~~l~ 377 (533)
+++|+++|+||+|. ++.+++. + + .. ..| +++.||||.. +++|+|+||+++ + +++++.+.
T Consensus 162 ~~~~~~li~Dea~~~g~~~~~~-~---~----~~----~~d---i~~~S~sk~K-~l~~~~~G~~v~---~~~~l~~~l~ 222 (424)
T 2po3_A 162 DEHGLRLYFDAAHALGCAVDGR-P---A----GS----LGD---AEVFSFHATK-AVNAFEGGAVVT---DDADLAARIR 222 (424)
T ss_dssp HHTTCEEEEECTTCTTCEETTE-E---T----TS----SSS---EEEEECCTTS-SSCCSSCEEEEE---SCHHHHHHHH
T ss_pred HHcCCEEEEECccccCCeECCe-e---c----cc----ccC---EEEEeCCCCC-CccCCCCeEEEe---CCHHHHHHHH
Confidence 99999999999999 6666442 1 1 11 134 7899999554 456799999998 6 88988887
Q ss_pred Hhhhc-c---cc-----CC-hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCc
Q 009517 378 KVASV-N---LC-----SN-ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-AEG 446 (533)
Q Consensus 378 ~~~~~-~---~~-----~~-~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g 446 (533)
..... . +. .+ .+.+.++...+. ..+.++...++.+++++++.+.|++++|+.+.. +++
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 291 (424)
T 2po3_A 223 ALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLT-----------SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRH 291 (424)
T ss_dssp HHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGG
T ss_pred HHHhcCccccccccccCcCCCcCHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence 65431 1 10 00 112222222221 123445566677777888999998888888876 554
Q ss_pred e---eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC---------C----CCc-------eEE
Q 009517 447 A---MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV---------P----GTW-------HFR 503 (533)
Q Consensus 447 g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~---------~----g~~-------~iR 503 (533)
+ +++| .+.++... .+. +...+ .+.|.++||.+.+. |... . ..+ .||
T Consensus 292 ~~~~~~~~-~i~~~~~~------~~~-~~~~l-~~~L~~~gI~v~~~--~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~ 360 (424)
T 2po3_A 292 GLNNHQYV-IVEIDEAT------TGI-HRDLV-MEVLKAEGVHTRAY--FSPGCHELEPYRGQPHAPLPHTERLAARVLS 360 (424)
T ss_dssp SCCCCCCE-EEEECHHH------HSS-CHHHH-HHHHHHTTEECBCT--TCSCGGGSTTTTTSCCCCCHHHHHHHTTEEE
T ss_pred CccccEEE-EEEECCcc------chh-hHHHH-HHHHHHCCCceecc--cCCccccchhhhhcCCCCChhHHHHhcCEEE
Confidence 3 2333 12223200 011 12333 35667799999872 2200 0 011 277
Q ss_pred EEe--cCCcCcHHHHHHHHHHHHHHHH
Q 009517 504 CTI--LPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 504 is~--~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+++ ..+++++++++++|++++++..
T Consensus 361 l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 361 LPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp ECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 774 3889999999999999987654
No 156
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=1.5e-28 Score=252.24 Aligned_cols=316 Identities=14% Similarity=0.132 Sum_probs=226.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
|+++++++.+.+.+. .|.+..+..+|+++++++++ .+++++++|+++|+..+++.+ + ++||+|+
T Consensus 19 ~~~~~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~~~~~~~~-~~gd~Vl 83 (393)
T 1mdo_A 19 GAEELAAVKTVLDSG------WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMALGI-GEGDEVI 83 (393)
T ss_dssp CHHHHHHHHHHHHHT------CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHhcC------CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHHHHHHcCC-CCCCEEE
Confidence 788888888888762 24456778999999999985 247999999999999999999 7 7999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|+.+...++..|++++.++++++ ++.+|+++|++++++ ++++|+++ ||||.+.+ +++|.++|
T Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~---~~~G~~~~---~~~i~~l~ 150 (393)
T 1mdo_A 84 TPSMTWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITP------QTKAIIPV---HYAGAPAD---LDAIYALG 150 (393)
T ss_dssp EESSSCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCT------TEEEECCB---CGGGCCCC---HHHHHHHH
T ss_pred eCCCccHhHHHHHHHCCCEEEEEeccCC-cCCCCHHHHHHhcCC------CceEEEEe---CCCCCcCC---HHHHHHHH
Confidence 9999999999999999999999998753 578999999999875 78888875 48999877 89999999
Q ss_pred HHcCCEEEEcccccc-ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCC-HHHHHH
Q 009517 300 KKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFS-AEVREQ 375 (533)
Q Consensus 300 ~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~-~~~~~~ 375 (533)
+++|+++|+||+|.. +.+.+. + + .. ..+++.||| |.+ +|.|+||+++ + +++++.
T Consensus 151 ~~~~~~li~D~a~~~g~~~~~~-~----------~---~~--~d~~~~S~~k~K~l---~~~~~g~~~~---~~~~~~~~ 208 (393)
T 1mdo_A 151 ERYGIPVIEDAAHATGTSYKGR-H----------I---GA--RGTAIFSFHAIKNI---TCAEGGIVVT---DNPQFADK 208 (393)
T ss_dssp HHHTCCBCEECTTCTTCEETTE-E----------T---TS--SSEEEEECCTTSSS---CSSSCEEEEE---SCHHHHHH
T ss_pred HHcCCeEEEECccccCCeECCe-e----------c---CC--CCeEEEeCCCCCcc---ccccceEEEe---CCHHHHHH
Confidence 999999999999985 344321 1 1 10 237789999 665 4569999998 5 788888
Q ss_pred HHHhhhccc-------------------------cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 376 IYKVASVNL-------------------------CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLE 430 (533)
Q Consensus 376 l~~~~~~~~-------------------------~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 430 (533)
+........ ..+.+.++++...+ +.+++..++.++.++++.
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l--------------~~~~~~~~~~~~~~~~l~ 274 (393)
T 1mdo_A 209 LRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL--------------QKLDALNARRAAIAAQYH 274 (393)
T ss_dssp HHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH--------------HTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHH
Confidence 876543111 12333333332222 234455566667788899
Q ss_pred HHHhcCCCceEec-C-----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCC----------
Q 009517 431 DAFNSLEGITCNK-A-----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFG---------- 494 (533)
Q Consensus 431 ~~L~~~~g~~~~~-~-----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~---------- 494 (533)
+.|.++ ++.+.. + .+++++|+.++ ... .+. +...+. +.|.++||.+.+|..+.
T Consensus 275 ~~L~~~-~~~~~~~~~~~~~~~~~~~~v~~~--~~~------~~~-~~~~l~-~~l~~~gi~v~~~~~~~~~~~~~~~~~ 343 (393)
T 1mdo_A 275 QAMADL-PFQPLSLPSWEHIHAWHLFIIRVD--EAR------CGI-TRDALM-ASLKTKGIGTGLHFRAAHTQKYYRERF 343 (393)
T ss_dssp HHHHTS-SCEECCCCSSCEECCCSCEEEECC--HHH------HSS-CHHHHH-HHHHHTTBCCBCCCCCGGGSHHHHHHS
T ss_pred HHHhcC-CcccccCCCCCCCceeEEEEEEec--ccc------ccc-CHHHHH-HHHHhCCCCcccccCccccChhhhccC
Confidence 999988 476542 2 35566775543 100 011 233333 45566899999987541
Q ss_pred ---CCC-----CCceEEEEec--CCcCcHHHHHHHHHHHHHHHHHHh
Q 009517 495 ---QVP-----GTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMDKF 531 (533)
Q Consensus 495 ---~~~-----g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~~~ 531 (533)
..+ +...|||++. .+++++++++++|+++++....++
T Consensus 344 ~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~~~~ 390 (393)
T 1mdo_A 344 PTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQGSHHH 390 (393)
T ss_dssp TTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC------
T ss_pred CccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcCCccc
Confidence 001 1237999996 799999999999999998877653
No 157
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.96 E-value=9.5e-29 Score=258.84 Aligned_cols=323 Identities=13% Similarity=0.077 Sum_probs=210.3
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH---hccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL---LIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~---l~~~~gd~ 217 (533)
|+.+++++.+++... ..| .+..++++++++++.+.++ ..++|++++|+++|+..+++. +. .+++
T Consensus 75 ~~~v~~a~~~~~~~~-----~~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~~~al~~ar~~~--~~~~ 141 (453)
T 2cy8_A 75 HPRVNAAIAEALSHG-----VQY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETTLLALRVARAFT--GRRM 141 (453)
T ss_dssp CHHHHHHHHHHHTTT-----CSS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHHHHHHHHHHHHH--CCCE
T ss_pred CHHHHHHHHHHHHhC-----CCC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHHHHHHHHHHHhh--CCCE
Confidence 789999999988752 123 2356899999999988764 578999999999999999998 54 4578
Q ss_pred EEEcCCcCcchHHHHHH-h----------CCe------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 009517 218 ILCPIPQYPLYSASIAL-H----------GGT------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~-~----------g~~------~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~ 280 (533)
|++.+|+|+++...+.. . |.. +..++. .|+++|++++++. ++++++|+++..+
T Consensus 142 vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~vi~ep~~ 211 (453)
T 2cy8_A 142 ILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH---GSDIAAFIAEPVG 211 (453)
T ss_dssp EEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHH---GGGEEEEEECSSE
T ss_pred EEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc---CCCEEEEEECCCC
Confidence 99999999987654322 1 221 222221 3899999999853 1257777655556
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe
Q 009517 281 NPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (533)
Q Consensus 281 NPtG~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r 359 (533)
||||.+ .+++++++|+++|++||+++|+||+|+++ +.+. ...+.. ..+ .+| +.||||++ + +|+|
T Consensus 212 ~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~--~~~~~~--~~~---~~d-----i~s~sK~l-~-~G~~ 276 (453)
T 2cy8_A 212 SHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN--HGMQAL--LDV---QPD-----LTCLAKAS-A-GGLP 276 (453)
T ss_dssp HHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT--THHHHH--HTC---CCS-----EEEEEGGG-G-TTSS
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc--hhhhHH--hCC---CCc-----EEEEChhh-h-CCcc
Confidence 789975 57999999999999999999999999987 5442 111111 122 456 44899999 5 4999
Q ss_pred eEEEEEecCCHHHHHHHHH------hhhccccCChHHHHHHHHHcCCCCCCChhHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 009517 360 GGYMEVTGFSAEVREQIYK------VASVNLCSNISGQILASLVMSPPKVGDESYESY-CAERDGILSSLARRAKTLEDA 432 (533)
Q Consensus 360 iG~v~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 432 (533)
+||+++ ++++++.+.. ....++++++++++++.++|+ . . .+.+.++++++++++++.
T Consensus 277 ~G~v~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~-----------~~~--~~~~~~~~~~~~~~l~~~ 340 (453)
T 2cy8_A 277 GGILGG---REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAID-----------TIL--EDDVCAKINDLGQFAREA 340 (453)
T ss_dssp CEEEEE---CHHHHTTSSSCC---------CCCCHHHHHHHHHHHH-----------HHH--HTTHHHHHHHHHHHHHHH
T ss_pred eEEEec---hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHH-----------HHh--hhhHHHHHHHHHHHHHHH
Confidence 999998 8898887754 122467889999998888773 1 1 133455666677777777
Q ss_pred HhcC----CCceEecCCceeEEecccCC-----CHHHHHHHHhcCC-C--ChHHHHHHHHHccceEEEcCCCCCCCCCCc
Q 009517 433 FNSL----EGITCNKAEGAMYLFPRIQL-----PEKAIKAAEAEKT-V--PDAFYCRRLLNATGIVLVPGSGFGQVPGTW 500 (533)
Q Consensus 433 L~~~----~g~~~~~~~gg~~~~~~~~~-----~~~~~~~~~~~~~-~--~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~ 500 (533)
|+++ +....+++.|. ++|+.+.. .... ........ + ....++..++ ++||.+.|+ +
T Consensus 341 L~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~-------~-- 408 (453)
T 2cy8_A 341 MNHLFARKGLNWLAYGRFS-GFHLMPGLPPNTTDTGS-ITRAEVARPDVKMIAAMRMALI-LEGVDIGGR-------G-- 408 (453)
T ss_dssp HHHHHHHTTCCEEEECCTT-EEEEEETSCTTCCCCHH-HHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT-------T--
T ss_pred HHHHHhhCCCcEEEEEeee-EEEEEEecccccccccc-ccccccccccHHHHHHHHHHHH-HCCeEEeCC-------C--
Confidence 7653 32333566655 56765542 1000 00000000 0 1234555554 579999652 1
Q ss_pred eEEEEecCCcCcHHHHHHHHHHHHHHHHH
Q 009517 501 HFRCTILPQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 501 ~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.+|+++..++++|++++++|+++++++.+
T Consensus 409 ~~~l~~~~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 409 SVFLSAQHEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEeeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 47887779999999999999999988754
No 158
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.96 E-value=5.7e-29 Score=258.47 Aligned_cols=326 Identities=12% Similarity=0.074 Sum_probs=209.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 219 (533)
|+++++++.+++.+. ..|.. ..+++.++++++.+.++ .+++|++++|+++|+..+++.+.. ..+++|+
T Consensus 70 ~p~v~~a~~~~~~~~-----~~~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi 138 (427)
T 3fq8_A 70 HPEVIEALKVAMEKG-----TSFGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEACMAVLRIMRAYTGRDKII 138 (427)
T ss_dssp CHHHHHHHHHHHTTC-----SCCSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhC-----CCcCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEE
Confidence 799999999998762 12322 23566666666666554 478999999999999999965431 2357899
Q ss_pred EcCCcCcchHHHHHHh-CC-------------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 009517 220 CPIPQYPLYSASIALH-GG-------------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~-g~-------------------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p 279 (533)
+.+|+|+++...+... |. .+..++.. |+++|++++++. ..++++|+++.+
T Consensus 139 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~---~~~~~~vi~~p~ 208 (427)
T 3fq8_A 139 KFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAEN---PGEIAGVILEPI 208 (427)
T ss_dssp EEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHS---TTTEEEEEECSS
T ss_pred EECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhC---CCCEEEEEEcCC
Confidence 9999998754332222 11 12333321 899999999762 125777777777
Q ss_pred CCCCccCCC-HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC
Q 009517 280 GNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (533)
Q Consensus 280 ~NPtG~~~s-~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ 358 (533)
+|++|.+.+ ++++++|+++|++||+++|+||+|.+| +.+. ... .+..+..+| +.||||++ + +|+
T Consensus 209 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~--~~~-----~~~~~~~~d-----i~t~sK~~-~-~G~ 273 (427)
T 3fq8_A 209 VGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY--GGV-----QEKFGVTPD-----LTTLGKII-G-GGL 273 (427)
T ss_dssp BCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT--THH-----HHHTTCCCS-----EEEECGGG-G-TTS
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc--chh-----hHhcCCCCC-----hhhhhhhh-h-CCc
Confidence 788887555 666999999999999999999999998 5442 111 111111455 56899999 5 699
Q ss_pred eeEEEEEecCCHHHHHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 359 RGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 359 riG~v~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
|+||+++ ++++++.+... ...++++++++++++.++|+... . +.+.++++++++++++.|+
T Consensus 274 ~~G~~~~---~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~-----------~-~~~~~~~~~~~~~~~~~l~ 338 (427)
T 3fq8_A 274 PVGAYGG---KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLR-----------Q-PGTYEYLDQITKRLSDGLL 338 (427)
T ss_dssp SCEEEEE---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHT-----------S-TTHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEE---cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHH-----------h-cCHHHHHHHHHHHHHHHHH
Confidence 9999998 99999887653 23567789999999888874211 0 2233444444445555444
Q ss_pred c----CCCceEecCCceeEEecccCCCH-HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCC
Q 009517 435 S----LEGITCNKAEGAMYLFPRIQLPE-KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQ 509 (533)
Q Consensus 435 ~----~~g~~~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~ 509 (533)
+ ++....+.+. |+++|+.+.... ................++.. |.++||.+.|+.. ..+|+++..+
T Consensus 339 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~Gi~v~~~~~-------~r~~~~~~~t 409 (427)
T 3fq8_A 339 AIAQETGHAACGGQV-SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRG-MLEQGIYLAPSQF-------EAGFTSLAHT 409 (427)
T ss_dssp HHHHHTTCCCEEEEE-TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHH-HHHTTEECCSSTT-------SCEECCTTCC
T ss_pred HHHHhCCCCeEEEEe-eeEEEEEEecCccccccccccccHHHHHHHHHH-HHHCCcEEecCCC-------CCEEeeCcCC
Confidence 3 3222233333 445555443110 00000000000002234444 5568999998642 1466666789
Q ss_pred cCcHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~ 526 (533)
++++++++++|++++++
T Consensus 410 ~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 410 EEDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998865
No 159
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=5.5e-28 Score=257.05 Aligned_cols=312 Identities=11% Similarity=0.037 Sum_probs=227.4
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHhccCCC--------CeEEEcCCcCcchH
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIRSEN--------DGILCPIPQYPLYS 229 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~~~~g--------d~Vlv~~p~~~~~~ 229 (533)
...|....+..++++++++++.+.+|.+.+++++ ++|+|+++++..++++++ ++| |+|+++.|+|..+.
T Consensus 128 ~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~-~~g~~~~g~~~d~Vi~~~~~~~~~~ 206 (514)
T 3mad_A 128 PLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYR-DWARATKGITAPEAVVPVSAHAAFD 206 (514)
T ss_dssp TTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHH-HHHHHHHCCSSCEEEEETTSCTHHH
T ss_pred CcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCccchHHH
Confidence 4455556677889999999999888866555788 999999999999999997 565 89999999999999
Q ss_pred HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 230 ~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
..+...|++++.+++++ ++.+|+++|+++|++ ++++|++++|+||||.+.+ +++|+++|++||+++|+|
T Consensus 207 ~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livD 275 (514)
T 3mad_A 207 KAAQYFGIKLVRTPLDA--DYRADVAAMREAITP------NTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVD 275 (514)
T ss_dssp HHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhcc------CCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEe
Confidence 99999999999999875 678999999999976 7999999999999999988 899999999999999999
Q ss_pred ccccccccc-----CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh---
Q 009517 310 EVYQENVYV-----PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--- 381 (533)
Q Consensus 310 e~y~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~--- 381 (533)
|+|.++.+. |. +...+.. . ..+ ..+++.|++|++. +|.++||+++ .++.+........
T Consensus 276 ea~~~~~~~~~~~~g~-~~~~~~~---~----~~g-~d~~~~s~~K~l~--~~~~~g~~~~---~~~~~~~~~~~~~~~~ 341 (514)
T 3mad_A 276 ACLGGFILPWAERLGY-PVPPFDF---R----LEG-VTSVSADTHKYGY--GAKGTSVILY---RRPDLLHYQYFIAADW 341 (514)
T ss_dssp CTTTTTTHHHHHHTTC-CCCCCST---T----STT-CCEEEECTTTTTC--CCSSCEEEEE---SSHHHHTTTCEEESSC
T ss_pred cccccccchhHHhcCC-CCCcccc---c----CCC-CcEEEECchhccC--CCCCeEEEEE---eCHHHhcccccccccc
Confidence 999987541 11 0011100 0 112 2477889999863 5789999988 4444332211000
Q ss_pred -------c--cccCC---hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeE
Q 009517 382 -------V--NLCSN---ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMY 449 (533)
Q Consensus 382 -------~--~~~~~---~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~ 449 (533)
. ..+.+ .+++.++...+ -...++++.+++.++++++.+.|++++|+.++.+..++
T Consensus 342 ~~~~~~~~~~~gs~~~~~~~a~~aal~~l------------~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~- 408 (514)
T 3mad_A 342 PGGLYFSPTFAGSRPGALSATAWAAMLSL------------GEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLWV- 408 (514)
T ss_dssp TTCSEEESSSCSSCCHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSSE-
T ss_pred CCCcccCCccCCCCchHHHHHHHHHHHHH------------hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeEE-
Confidence 0 11122 22333333332 12345677788889999999999998899988776654
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---CCcCcHHHHHHHHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL---PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~ 526 (533)
+|+... . . +...+. +.|.++||.+ +|..|. +++|+++. .+++++++++++|++++++
T Consensus 409 ~~~~~~--~----------~-~~~~l~-~~L~~~Gi~v-~g~~~~-----~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 409 IAVASD--E----------L-NIYQVM-EEMAGRGWRL-NGLHRP-----PAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp EEEECS--S----------S-CHHHHH-HHHHTTTCBC-EEETTT-----TEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred EEEeCC--C----------C-CHHHHH-HHHHhcCCEe-ccCCCC-----CeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 443322 0 1 233333 4556679988 555442 27999985 4568999999999999988
Q ss_pred HHHH
Q 009517 527 FMDK 530 (533)
Q Consensus 527 ~~~~ 530 (533)
+.++
T Consensus 469 ~~~~ 472 (514)
T 3mad_A 469 VRAH 472 (514)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 7653
No 160
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.96 E-value=9.5e-30 Score=261.72 Aligned_cols=326 Identities=10% Similarity=0.048 Sum_probs=205.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc---cCCCC-
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RSEND- 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~~gd- 216 (533)
|+.+++++.+.+.+........|....+..++.+++.+.+.+.+| .++++|++|+|+++|+..+++.+. .++||
T Consensus 33 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~ 110 (400)
T 3vax_A 33 DQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVS--AEPDELIFTSGATESNNIALLGLAPYGERTGRR 110 (400)
T ss_dssp CHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcC--CCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCC
Confidence 788999988887642110111222222223333444444444445 557899999999999999999874 14799
Q ss_pred eEEEcCCcCcchHHHHHH---hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHH
Q 009517 217 GILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (533)
Q Consensus 217 ~Vlv~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~ 293 (533)
+|+++.++|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+++ ++
T Consensus 111 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~ 179 (400)
T 3vax_A 111 HIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRP------DTLLVSLMHVNNETGVIQP---VA 179 (400)
T ss_dssp EEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCT------TEEEEECCSBCTTTCBBCC---HH
T ss_pred EEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCC------CceEEEEECCCCCceeeCc---HH
Confidence 999999999987766655 599999999875 568899999999976 7999999999999999999 78
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE-EecCCHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME-VTGFSAEV 372 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~-~~~~~~~~ 372 (533)
+|+++|++||+++|+||+|..... + .. +.. ..+ +++.|+||.+ |++| +|+++ +. ++++
T Consensus 180 ~i~~la~~~~~~li~D~a~~~~~~----~-~~-------~~~-~~d---~~~~s~~K~~-g~~g--~g~~~~~~--~~~~ 238 (400)
T 3vax_A 180 ELAQQLRATPTYLHVDAAQGYGKV----P-GD-------LTT-PID---MISISGHKIG-APKG--VGALVTRR--REEM 238 (400)
T ss_dssp HHHHHHTTSSCEEEEECTTTTTTS----G-GG-------GGS-CCS---EEEEETGGGT-SCSS--CEEEEECB--CSSS
T ss_pred HHHHHHHhcCCEEEEEhhhhcCCC----C-cC-------hhh-cCc---EEEEeHHHhC-CCCc--eEEEEEec--chhc
Confidence 999999999999999999974211 1 11 100 123 7799999965 6555 55555 51 2111
Q ss_pred H---HHHHHhh-------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 373 R---EQIYKVA-------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 373 ~---~~l~~~~-------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
. ..+.... . ...+.+..++.++..+++ ...+.+++++++++++++++.+.|+ .+|+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~ 307 (400)
T 3vax_A 239 DDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAK----------IFEAEHAQWQVAAQDLRSRLLAGLA-STSFQV 307 (400)
T ss_dssp TTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH----------HHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEE
T ss_pred cccccccCceecCCCceeeeecCCCCHHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEE
Confidence 1 1111110 1 234456666666666553 1223467788899999999999999 789998
Q ss_pred ecCCc---eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC-------------C---CCceE
Q 009517 442 NKAEG---AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV-------------P---GTWHF 502 (533)
Q Consensus 442 ~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~-------------~---g~~~i 502 (533)
..+.+ +.++++.+. . . +...+. +.|. +||.+.+|..|... . ..++|
T Consensus 308 ~~~~~~~~~~~~~~~~~--~----------~-~~~~l~-~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 372 (400)
T 3vax_A 308 NGDQDHVVPHILNLSFE--D----------V-DAEAFL-VTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSL 372 (400)
T ss_dssp CSCTTSBCTTEEEEECT--T----------C-CHHHHH-HHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEE
T ss_pred eCCcccCCCCEEEEEeC--C----------C-CHHHHH-HHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceE
Confidence 87764 223333232 1 1 233444 4455 89999998766421 0 02599
Q ss_pred EEEe-c--CCcCcHHHHHHHHHHHHHH
Q 009517 503 RCTI-L--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 503 Ris~-~--~~~e~i~~~~~~l~~~l~~ 526 (533)
||++ + .+++++++++++|++++++
T Consensus 373 Rls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 373 RFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEEEEEC--------------------
T ss_pred EEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 9999 6 6788999999999988764
No 161
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.96 E-value=1.1e-28 Score=256.86 Aligned_cols=326 Identities=14% Similarity=0.051 Sum_probs=215.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH---hccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL---LIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~---l~~~~gd~ 217 (533)
++++++++.+++.+.. ...|. .++++++++.+.+.++ ..++|++++|+++|+..+++. +. ++++
T Consensus 74 ~~~v~~a~~~~~~~~~---~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA~~~al~~ar~~~--~~~~ 140 (434)
T 2epj_A 74 HPRVLEAVEEALARGW---LYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEATMTAIRLARGYT--GRDL 140 (434)
T ss_dssp CHHHHHHHHHHHHTCS---CCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHHHHHHHHHHHHHH--CCCE
T ss_pred CHHHHHHHHHHHHhCC---CCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhh--CCCe
Confidence 7899999999987621 12332 2334444444444332 368999999999999999997 43 5678
Q ss_pred EEEcCCcCcchHHHHH--------------HhCC------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe
Q 009517 218 ILCPIPQYPLYSASIA--------------LHGG------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI 277 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~--------------~~g~------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~ 277 (533)
|++.+|+|+++...+. ..|. .++.++. .|+++|++++++. +.++++|+++
T Consensus 141 vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~vi~e 210 (434)
T 2epj_A 141 ILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEY---GDRIAGVIVE 210 (434)
T ss_dssp EEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHH---GGGEEEEEEC
T ss_pred EEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhC---CCCEEEEEEe
Confidence 9999999998654221 1132 2444543 2899999999853 1257777666
Q ss_pred CCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC
Q 009517 278 NPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (533)
Q Consensus 278 ~p~NPtG~~~-s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~ 356 (533)
..+||||.++ +++++++|.++|++||+++|+||+|++| +.+. ...+.. .++ .+| +.||||.+ |.
T Consensus 211 p~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~--~~~~~~--~~~---~~d-----i~s~sK~l-~~- 275 (434)
T 2epj_A 211 PVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL--EGAQGY--FNI---EGD-----IIVLGKII-GG- 275 (434)
T ss_dssp SSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST--THHHHH--HTC---CCS-----EEEEEGGG-GT-
T ss_pred CCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc--chhhHH--hCC---CCC-----eeeecchh-cC-
Confidence 5577899765 7999999999999999999999999987 3332 111111 122 456 45999999 54
Q ss_pred CCeeEEEEEecCCHHHHHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 357 GKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDA 432 (533)
Q Consensus 357 G~riG~v~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 432 (533)
|+|+||+++ ++++++.+... ...++++++++++++.++|+ ..++ +.+.++++++++++++.
T Consensus 276 G~~~G~v~~---~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~-----------~~~~-~~~~~~~~~~~~~l~~~ 340 (434)
T 2epj_A 276 GFPVGAVAG---SREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLK-----------ALEE-EPVYSVSREAAKALEEA 340 (434)
T ss_dssp TSSCEEEEE---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH-----------HHHH-SCHHHHHHHHHHHHHHH
T ss_pred Ccceeeeee---cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH-----------HHHh-cCHHHHHHHHHHHHHHH
Confidence 999999998 88988877652 22567889999998888774 1121 34566677777777777
Q ss_pred HhcC---CCc-eEecCCceeEEecccCC-CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 433 FNSL---EGI-TCNKAEGAMYLFPRIQL-PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 433 L~~~---~g~-~~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
|+++ .++ ..+++.|. ++|+.+.. +.....+...........++..+ .++||.+.||.. ..+|+++.
T Consensus 341 L~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~-------~~~~~~~~ 411 (434)
T 2epj_A 341 ASEVLDRTGLPYTINRVES-MMQLFIGVEEVSNAAQARKADKKFYVKLHEEM-LRRGVFIAPSNL-------EAVFTGLP 411 (434)
T ss_dssp HHHHHHHHTCCEEEEEETT-EEEEEETCSCCSSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT-------SCEECCTT
T ss_pred HHHHHhhCCCcEEEEEeee-EEEEEEeCCCcccchhccccCHHHHHHHHHHH-HHCCeEEeccCC-------CcEEEecc
Confidence 7664 133 33455555 55655542 10000000000000123444444 468999998642 15778777
Q ss_pred CCcCcHHHHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.+++++++++++|+++++++.
T Consensus 412 ~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 412 HQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988763
No 162
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.96 E-value=6.5e-29 Score=259.63 Aligned_cols=323 Identities=11% Similarity=0.103 Sum_probs=218.2
Q ss_pred CHHHH-H-HHHH---HHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc---c
Q 009517 141 SADSI-E-RAWQ---ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---R 212 (533)
Q Consensus 141 p~~v~-~-~~~~---~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~ 212 (533)
+++++ + ++.+ ++..... ....|.. ....++++.+++++ + ....++|++|+|+++|++.+++.+. .
T Consensus 72 ~p~v~~~~A~~~~~~~~~~~~~-~~~~~~~-~~~~~la~~la~~~----~-~~~~~~v~~~~~gseA~~~aik~a~~~~~ 144 (449)
T 2cjg_A 72 PPALVDDREFHAELMQAALNKP-SNSDVYS-VAMARFVETFARVL----G-DPALPHLFFVEGGALAVENALKAAFDWKS 144 (449)
T ss_dssp CHHHHTCHHHHHHHHHHHTCCC-CTTTCCC-HHHHHHHHHHHHHH----C-CTTCCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCC-CCcccCC-HHHHHHHHHHHHhc----C-CCCCCEEEEeCchHHHHHHHHHHHHHHhc
Confidence 68899 8 8888 7765211 0011222 11345555555554 3 1357899999999999999998653 1
Q ss_pred ---------C-CCCeEEEcCCcCcchHHHHHHh---------CC-----eEEEEecCC--CCC------CCCCHHHHHHH
Q 009517 213 ---------S-ENDGILCPIPQYPLYSASIALH---------GG-----TLVPYYLDE--ATG------WGLETSEVKKQ 260 (533)
Q Consensus 213 ---------~-~gd~Vlv~~p~~~~~~~~~~~~---------g~-----~~~~v~~~~--~~~------~~ld~~~l~~~ 260 (533)
. +|++|++++|+|+++...+... +. .++.+|.++ ... ...+++.|+++
T Consensus 145 ~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~ 224 (449)
T 2cjg_A 145 RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAA 224 (449)
T ss_dssp HHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHH
Confidence 1 2899999999999865533222 11 455555543 100 01456668888
Q ss_pred HHHHHhcCCCeeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCC
Q 009517 261 LEAAKAKGITVRALVVINPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (533)
Q Consensus 261 i~~~~~~g~~~~~iil~~p~NPtG-~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (533)
|++. ++++++|+++.++|||| .+++++++++|+++|++||+++|+||+|+++.+.|. ...+..+ ++ .+|
T Consensus 225 i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~--~~~~~~~--~~---~~d 294 (449)
T 2cjg_A 225 FETR---PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT--AWAYQQL--DV---APD 294 (449)
T ss_dssp HHHS---TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSTHHHH--TC---CCS
T ss_pred HHhc---CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc--ceeeccc--CC---Cce
Confidence 8641 12688877666689999 599999999999999999999999999999877653 2222221 22 455
Q ss_pred ceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHH-----Hhh-hccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 340 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY-----KVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 340 ~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~-----~~~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
+.||||.+ |+||+++ ++++++.+. ... ..++++++++++++.++|+ ..+
T Consensus 295 -----i~t~sK~l------~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~-----------~~~ 349 (449)
T 2cjg_A 295 -----IVAFGKKT------QVCGVMA---GRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILE-----------VIE 349 (449)
T ss_dssp -----EEEECGGG------SSEEEEE---CGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHH-----------HHH
T ss_pred -----EEEecCcc------cEEEEEE---CHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHH-----------HHH
Confidence 34799965 7999998 888877522 122 2568889999999988874 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CC-ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEE
Q 009517 414 ERDGILSSLARRAKTLEDAFNSL----EG-ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLV 488 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~----~g-~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~ 488 (533)
. +.+.++++++++++++.|+++ ++ +..+++.|.|+. +++.... ....++..++ ++||.+.
T Consensus 350 ~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~-~~~~~~~------------~~~~~~~~l~-~~Gv~v~ 414 (449)
T 2cjg_A 350 A-EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCA-FSLPTTA------------DRDELIRQLW-QRAVIVL 414 (449)
T ss_dssp H-HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEE-EECSSHH------------HHHHHHHHHH-HTTEECE
T ss_pred h-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEE-EEECChH------------HHHHHHHHHH-HCCeEEe
Confidence 1 345677788888888888753 55 767778777654 3443110 1234555555 5899999
Q ss_pred cCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHH
Q 009517 489 PGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 489 pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~ 527 (533)
|+. .++|||++ ..++++|++++++|+++++++
T Consensus 415 ~~g-------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 415 PAG-------ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp EET-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 852 24999976 489999999999999998764
No 163
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.96 E-value=1.9e-28 Score=254.91 Aligned_cols=326 Identities=13% Similarity=0.096 Sum_probs=210.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCC----cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc----
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHS----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~----~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---- 212 (533)
|+.+++++.+.+..........|... ....++|++++++++ +++++|++|+|+++++..+++.+..
T Consensus 31 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~~~g~t~a~~~~~~~~~~~~~~ 104 (432)
T 3a9z_A 31 EPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIG------GKPQDIIFTSGGTESNNLVIHSTVRCFHE 104 (432)
T ss_dssp CHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcC------CCcCeEEEeCChHHHHHHHHHHHHhhhhh
Confidence 78999999888865211001122211 123688888888874 5678999999999999999998741
Q ss_pred ---CCCCeEEEcCCcCcch-----------------HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 009517 213 ---SENDGILCPIPQYPLY-----------------SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (533)
Q Consensus 213 ---~~gd~Vlv~~p~~~~~-----------------~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~ 272 (533)
++||+|+++.|+|+.| ....+..|.+++.++++++ ++.+|+++|++++++ +++
T Consensus 105 ~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~i~~------~~~ 177 (432)
T 3a9z_A 105 QQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQVEVEDILAAVRP------TTC 177 (432)
T ss_dssp HHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSSCCHHHHHHTCCT------TEE
T ss_pred ccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCCcCHHHHHHhccC------Cce
Confidence 2799999999999876 2334457999999998753 457899999999875 799
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcC----------CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceE
Q 009517 273 ALVVINPGNPTGQVLAEENQRAIVDFCKKEG----------LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342 (533)
Q Consensus 273 ~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~----------~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 342 (533)
+|++++|+||||.+++ +++|.++|++++ +++|+||+|..+. . ..++.. + ..|
T Consensus 178 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~-~~~~~~----~---~~d--- 239 (432)
T 3a9z_A 178 LVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----R-RVDVED----L---GVD--- 239 (432)
T ss_dssp EEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----S-CCCHHH----H---CCS---
T ss_pred EEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----c-ccChhh----c---CCC---
Confidence 9999999999999999 678899999999 9999999997521 1 123222 2 345
Q ss_pred EEEecCCccCCCCCCCeeEEEEEecCCHHH-HHHHHHh-------hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEV-REQIYKV-------AS-VNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 343 i~i~S~SK~~~gl~G~riG~v~~~~~~~~~-~~~l~~~-------~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
+++.|+||.+ |.|+||+++ ++++ ...+... .. ..++++..++.++.++++ ...+
T Consensus 240 ~~~~s~~K~~----g~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~----------~~~~ 302 (432)
T 3a9z_A 240 FLTIVGHKFY----GPRIGALYV---RGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAD----------LVSE 302 (432)
T ss_dssp EEEEEGGGTT----CCSCEEEEE---TTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHH----------HHHH
T ss_pred EEEEehhHhc----CCcceEEEE---ccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHH----------HHHh
Confidence 5689999975 457999998 6554 2222211 11 234567777777766663 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEe--cC-----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceE
Q 009517 414 ERDGILSSLARRAKTLEDAFNSLEGITCN--KA-----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIV 486 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~-----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~ 486 (533)
.++++.++++++++++.+.|++++|+.+. .+ ..+..+++.+... +. +...+. ..+ .+|.
T Consensus 303 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~-~~l--~~i~ 368 (432)
T 3a9z_A 303 NCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGS----------QL-RGYMVL-AQC--QTLL 368 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECST----------TC-CHHHHH-HHC--SSEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCC----------CC-cHHHHH-HHh--cCeE
Confidence 46778888999999999999886565432 32 1111222112200 00 122222 222 3788
Q ss_pred EEcCCCCCCC--------------C---CCceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 487 LVPGSGFGQV--------------P---GTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 487 v~pg~~f~~~--------------~---g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+.+|..|... . +.++|||+++ .+++++++++++|+++++++.
T Consensus 369 ~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 369 ASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp CBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 8887655321 0 1258999997 489999999999999988764
No 164
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=3e-29 Score=254.23 Aligned_cols=316 Identities=14% Similarity=0.108 Sum_probs=215.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh-HHHHHHHHHHhccCC--
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA-SPAVHMMMQLLIRSE-- 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~-~~al~~~~~~l~~~~-- 214 (533)
|+.+++++.+.+.+..+.....|.. ..+..++.+++.+.+.+.+|.+ ++++|++|+|+ ++|+..++..+. .+
T Consensus 15 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~gt~al~~~~~~l~-~~~~ 92 (360)
T 1w23_A 15 PKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQFTMLPMNLL-TKGT 92 (360)
T ss_dssp CHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHC-CTTC
T ss_pred CHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCcchHHHHHHHHHhc-CCCC
Confidence 7899999988775421101122322 3344445555555555555643 35799999999 999999999987 44
Q ss_pred -CCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHH-HHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 215 -NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK-QLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 215 -gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~-~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
||.|+++.++|..+ ..++..| +++.++++++.+ .+|++++++ ++++ ++++|++++|+||||.+++ ++
T Consensus 93 ~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~------~~k~v~~~~~~nptG~~~~--~i 161 (360)
T 1w23_A 93 IGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNE------NDAYLHITSNNTIYGTQYQ--NF 161 (360)
T ss_dssp EEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCT------TEEEEEEESEETTTTEECS--SC
T ss_pred cccEEEecchhHHHH-HHHHHhC-CeEEeecccccC-cCCccchHhhccCC------CCCEEEEeCCCCCcceecc--cc
Confidence 56677777776543 3466779 999999875333 378888988 7754 7999999999999999987 22
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
+++||+++|+||+|..+.. + .++ .. -+ +++.|+||.+ |++| +||+++ ++++
T Consensus 162 ------~~~~~~~li~D~a~~~~~~----~-~~~----~~-----~d---i~~~s~sK~~-~~~G--~G~~~~---~~~~ 212 (360)
T 1w23_A 162 ------PEINHAPLIADMSSDILSR----P-LKV----NQ-----FG---MIYAGAQKNL-GPSG--VTVVIV---KKDL 212 (360)
T ss_dssp ------CCCCSSCEEEECTTTTTSS----C-CCG----GG-----CS---EEEEETTTTT-SCTT--CEEEEE---EHHH
T ss_pred ------cccCCceEEEechhhcCCC----C-cCc----cc-----CC---EEEEEccccc-CCCC--cEEEEE---cHHH
Confidence 2379999999999986432 1 111 11 13 7799999998 7676 899998 7887
Q ss_pred HHHHHHhh-------------hccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCC
Q 009517 373 REQIYKVA-------------SVNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFNSLE 437 (533)
Q Consensus 373 ~~~l~~~~-------------~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~ 437 (533)
++.+.+.. ....+++..++.++..+++ ...+ .+++++++++++++++.+.|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 282 (360)
T 1w23_A 213 LNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLD----------WIKDLGGAEAIAKQNEEKAKIIYDTIDESN 282 (360)
T ss_dssp HCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH----------HHHHTTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHH----------HHHHhcCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 76554321 1113456666666666553 1112 357788889999999999999986
Q ss_pred Cc-eEe-cC--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcC
Q 009517 438 GI-TCN-KA--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQED 511 (533)
Q Consensus 438 g~-~~~-~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e 511 (533)
++ ... .+ .+++++|+.++ ... +...++.+ |.++||.+.||..+ .++|||+++ .+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~~~~-l~~~gi~~~~~~~~-----~~~iRis~~~~~~~~ 344 (360)
T 1w23_A 283 GFYVGHAEKGSRSLMNVTFNLR--NEE----------LNQQFLAK-AKEQGFVGLNGHRS-----VGGCRASIYNAVPID 344 (360)
T ss_dssp TSSEESSCGGGBCSSEEEEECS--SHH----------HHHHHHHH-HHHTTEESCBCCTT-----TCSEEEECCTTSCHH
T ss_pred CcccccCCchhccCcEEEEEcC--CCc----------cHHHHHHH-HHHCCeeeecCCCC-----CCeEEEEecCCCCHH
Confidence 55 543 23 35667786553 210 12334434 66789999998764 238999997 6888
Q ss_pred cHHHHHHHHHHHHHH
Q 009517 512 KIPAIVTRLTDFHKN 526 (533)
Q Consensus 512 ~i~~~~~~l~~~l~~ 526 (533)
++++++++|++++++
T Consensus 345 ~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 345 ACIALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999887653
No 165
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.9e-28 Score=257.19 Aligned_cols=332 Identities=11% Similarity=0.020 Sum_probs=239.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-----CC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----EN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----~g 215 (533)
++.+.+.+.+++..........|....|..++++++++++.+.+|.+.+++++++++|+++++..++++++ + +|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~-~~~~~~~g 155 (497)
T 3mc6_A 77 GDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAK-MYALHHRG 155 (497)
T ss_dssp CHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHH-HHHHHHSC
T ss_pred chHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHH-HHHHhcCC
Confidence 46677777777765332224456667788899999999999999977668899999999999999999986 3 45
Q ss_pred ---CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 216 ---DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 216 ---d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
++|+++.|+|..+...+...|++++.+++++ +++.+|+++|+++|++ ++++|++++|+||||.+.+ +
T Consensus 156 ~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~---l 225 (497)
T 3mc6_A 156 ITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINK------NTVLLVGSAPNFPHGIADD---I 225 (497)
T ss_dssp CSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCS------SEEEEEEETTCTTTCCCCS---C
T ss_pred CCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhh------CCEEEEEECCCCCCCcCCC---H
Confidence 8999999999999999999999999999875 3678999999999976 7999999999999999988 8
Q ss_pred HHHHHHHHHcCCEEEEcccccccccc-----CCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYV-----PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
++|+++|++||+++|+|++|.++... +......+.. . ..+ ..+++.|++|.+. +|.++||+++
T Consensus 226 ~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~---~----~~g-~d~~~~s~~K~l~--~~~~~g~~~~-- 293 (497)
T 3mc6_A 226 EGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF---R----VPG-VTSISCDTHKYGF--APKGSSVIMY-- 293 (497)
T ss_dssp TTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST---T----STT-CCEEEEETTTTTC--CCSSCEEEEC--
T ss_pred HHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccc---c----CCC-CcEEEECchhhcC--CCCCceeEEe--
Confidence 89999999999999999999875432 1000001100 0 112 2367889999763 5788999987
Q ss_pred CCHHHHHHHHHhhhccc------cCC---------hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 368 FSAEVREQIYKVASVNL------CSN---------ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDA 432 (533)
Q Consensus 368 ~~~~~~~~l~~~~~~~~------~~~---------~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 432 (533)
+++.+..........+ .++ ..++.++...+. ...++++.++..++++++++.
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~------------~~~~~~~~~~~~~~~~~l~~~ 360 (497)
T 3mc6_A 294 -RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG------------ENGYIESCQEIVGAAMKFKKY 360 (497)
T ss_dssp -SSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh------------HHHHHHHHHHHHHHHHHHHHH
Confidence 5544433211111000 011 233444444331 133466777888889999999
Q ss_pred Hhc-CCCceEe-cCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-CC
Q 009517 433 FNS-LEGITCN-KAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL-PQ 509 (533)
Q Consensus 433 L~~-~~g~~~~-~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~-~~ 509 (533)
|++ +||+.++ ++.++++.|. .. . . +...+. +.|.++||.+.++.... .+|+++. .+
T Consensus 361 L~~~~~g~~~~~~~~~~~v~~~-~~--~----------~-~~~~l~-~~L~~~Gi~v~~~~~~~------~~ri~~~~~t 419 (497)
T 3mc6_A 361 IQENIPDLDIMGNPRYSVISFS-SK--T----------L-NIHELS-DRLSKKGWHFNALQKPV------ALHMAFTRLS 419 (497)
T ss_dssp HHHSCTTCEECSCCCSSEEEEE-CT--T----------T-THHHHH-HHHHTTTCBCEECCSSC------CEEEECCTTT
T ss_pred HHhcCCCEEEecCCCeeEEEEe-CC--C----------C-CHHHHH-HHHHhCCEEEecCCCCC------eEEEEEeCCC
Confidence 999 6899887 4666666652 21 1 1 123333 55667899988754321 5799987 88
Q ss_pred cCcHHHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~~~ 529 (533)
++++++++++|+++++++.+
T Consensus 420 ~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 420 AHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp TCTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999987653
No 166
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=4.6e-27 Score=243.03 Aligned_cols=329 Identities=13% Similarity=0.068 Sum_probs=218.2
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+++++.+.+.+.... ....|.......++++.+.+.+.+.+| .++++|++++| ++++..+++.++ ++||+
T Consensus 38 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG-t~a~~~~~~~~~-~~gd~ 113 (417)
T 3n0l_A 38 LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG-SQANQGVYAALI-NPGDK 113 (417)
T ss_dssp CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHS-CTTCE
T ss_pred CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-HHHHHHHHHHhc-CCCCE
Confidence 788999988877442110 012233344445666666666666566 45667888887 799999999998 89999
Q ss_pred EEEcCCcCcchHH---HHHHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 218 ILCPIPQYPLYSA---SIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 218 Vlv~~p~~~~~~~---~~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
|+++.|+|+++.. .+...| ..+++++++ .++.+|+++|++++++. ++++|++++|+| |.+.+ +
T Consensus 114 vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~--G~~~~---l 181 (417)
T 3n0l_A 114 ILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKE-----KPKLIVCGASAY--ARVID---F 181 (417)
T ss_dssp EEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHH-----CCSEEEECCSSC--CSCCC---H
T ss_pred EEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhc-----CCeEEEECCccc--CccCC---H
Confidence 9999999987654 333333 445556555 46789999999999854 789999888887 77887 8
Q ss_pred HHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-H
Q 009517 293 RAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-A 370 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~-~ 370 (533)
++|+++|++||+++|+||+| .++.+.+..+ ..+ . ..| |++.||||+| +|+|+||+++ + +
T Consensus 182 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~~----~-----~~d---i~~~s~sK~l---~g~~~G~~~~---~~~ 242 (417)
T 3n0l_A 182 AKFREIADEIGAYLFADIAHIAGLVVAGEHP-SPF----P-----YAH---VVSSTTHKTL---RGPRGGIIMT---NDE 242 (417)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTSSC-CCT----T-----TCS---EEEEESSTTT---CSCSCEEEEE---SCH
T ss_pred HHHHHHHHHcCCEEEEECccchhhhhcccCC-Ccc----c-----cce---EEEeeCcccc---CCCCeeEEEE---CCH
Confidence 99999999999999999996 4544543211 110 0 123 7899999987 4889999998 6 7
Q ss_pred HHHHHHHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCce
Q 009517 371 EVREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK-AEGA 447 (533)
Q Consensus 371 ~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg 447 (533)
++++.+..... ...+++...+.++..++.. ...++++.++++++++++++.+.|.+. |+.+.. +..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 312 (417)
T 3n0l_A 243 ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKF---------NLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDN 312 (417)
T ss_dssp HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH---------HTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSS
T ss_pred HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHH---------HHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCc
Confidence 88888877654 2233444444444444321 011345677778888889999999885 888765 2345
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC---CCCCceEEEEec------CCcCcHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ---VPGTWHFRCTIL------PQEDKIPAIVT 518 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---~~g~~~iRis~~------~~~e~i~~~~~ 518 (533)
.++|+.+..+ +. +...+.++|+++||.+.++..+.. .-....+|+++. .++++|+++++
T Consensus 313 ~~~~~~~~~~----------~~--~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~ 380 (417)
T 3n0l_A 313 HLVLMSFLDR----------EF--SGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSN 380 (417)
T ss_dssp SEEEEECTTS----------SS--CHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred eEEEEEcccC----------CC--CHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHH
Confidence 5677655411 11 223345677889999997654432 112247999984 46789999999
Q ss_pred HHHHHHHH
Q 009517 519 RLTDFHKN 526 (533)
Q Consensus 519 ~l~~~l~~ 526 (533)
+|++++++
T Consensus 381 ~l~~~l~~ 388 (417)
T 3n0l_A 381 YIADILDD 388 (417)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99998864
No 167
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=1.5e-28 Score=258.39 Aligned_cols=379 Identities=14% Similarity=0.119 Sum_probs=245.1
Q ss_pred ccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHH
Q 009517 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (533)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~ 143 (533)
++..+.++++..+..++..+...+.+ ++++..|.+-. +.. +...+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~~~~~~~yl----------------------D~~--~~~~~~~ 54 (467)
T 2oqx_A 8 RIRVIEPVKRTTRAYREEAIIKSGMN---------PFLLDSEDVFI----------------------DLL--TDSGTGA 54 (467)
T ss_dssp CCCCCCCCCCCCHHHHHHHHHHTTSC---------GGGSCGGGCSE----------------------ECS--CCSSCSC
T ss_pred heeeecccccccHHHHHHHHHHcCCC---------ceeccCCCeeE----------------------ecc--cCCCcHH
Confidence 45667777777778888888877766 78888887532 100 0000256
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC-----C---
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE-----N--- 215 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~-----g--- 215 (533)
+++++.+++.. ....|++..+..+|+++++++++ .+++++|+|+++|+..++++++ ++ |
T Consensus 55 v~~a~~~~l~~----~~~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~-~~~~~~~G~~~ 121 (467)
T 2oqx_A 55 VTQSMQAAMMR----GDEAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLI-KKREQEKGLDR 121 (467)
T ss_dssp CCHHHHHHTTS----CCCCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHH-HHHHHHHCCCT
T ss_pred HHHHHHHHhcc----CcceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHh-ccccccCCCCc
Confidence 67777777653 23468888889999999999984 3689999999999999999998 67 8
Q ss_pred -CeEEEcCCcCcchHHHHHHhCCeEEEEecC----CC----CCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC-cc
Q 009517 216 -DGILCPIPQYPLYSASIALHGGTLVPYYLD----EA----TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQ 285 (533)
Q Consensus 216 -d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~----~~----~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt-G~ 285 (533)
|+|++..+.|..+.......|+.++..... .. .++.+|+++|+++|++.. .+++++|++++|+||| |.
T Consensus 122 ~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~ 199 (467)
T 2oqx_A 122 SKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQ 199 (467)
T ss_dssp TTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCB
T ss_pred cceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCc
Confidence 998877544455566666677776654211 11 245689999999998631 0268999999999998 89
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccc----------ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCC
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQE----------NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl 355 (533)
+++.+++++|+++|++||+++|+|+++.. ..+.+. +...+..++.. ..| +++.|+||++ |+
T Consensus 200 ~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~----~~~~~~~~~~~-~~d---~~~~s~sK~~-g~ 270 (467)
T 2oqx_A 200 PVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDW----TIEQITRETYK-YAD---MLAMSAKKDA-MV 270 (467)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTS----CHHHHHHHHGG-GCS---EEEEESSSTT-CC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCc----cHHHHhhhhhc-cCC---eEEEeccccc-CC
Confidence 99999999999999999999999965532 123231 22232211000 134 3478999998 65
Q ss_pred CCCeeEEEEEecCCHH-HHHHHHHhhh-----c---cccC-ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 009517 356 CGKRGGYMEVTGFSAE-VREQIYKVAS-----V---NLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (533)
Q Consensus 356 ~G~riG~v~~~~~~~~-~~~~l~~~~~-----~---~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (533)
+ . .||+++ +++ +++.+.++.. . .++. +..+..++...+. .+.+ +...++..++
T Consensus 271 ~-~-Gg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~----------~~~~--~~~~~~~~~~ 333 (467)
T 2oqx_A 271 P-M-GGLLCM---KDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY----------DGMN--LDWLAYRIAQ 333 (467)
T ss_dssp S-S-CEEEEE---CSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH----------HTTC--HHHHHHHHHH
T ss_pred C-C-ceEEEe---cChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhH----------hhhh--HHHHHHHHHH
Confidence 5 1 277776 555 4443333221 0 1111 1111111111111 1110 1233445677
Q ss_pred HHHHHHHHhcCCCceEecCCceeEEecccCC--CHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCC--CCCC
Q 009517 426 AKTLEDAFNSLEGITCNKAEGAMYLFPRIQL--PEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGF--GQVP 497 (533)
Q Consensus 426 ~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f--~~~~ 497 (533)
++++.+.|+++ |+.++ +.+++++|++++. + +.+. ...++..++.++||.+.||..| +..+
T Consensus 334 ~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~ 401 (467)
T 2oqx_A 334 VQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLP----------HIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDP 401 (467)
T ss_dssp HHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHST----------TSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCT
T ss_pred HHHHHHHHHHC-CCeee-cCCceEEEEechhhcc----------cCCcccccHHHHHHHHHHhcCceecccccccccccc
Confidence 88999999988 88888 8888889976530 1 0111 2233555548899999995533 2101
Q ss_pred --------CCceEEEEec---CCcCcHHHHHHHHHHHHHHHH
Q 009517 498 --------GTWHFRCTIL---PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 498 --------g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+.++|||++. .++++|++++++|++++++..
T Consensus 402 ~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 402 KTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp TTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 2359999997 788999999999999987643
No 168
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.96 E-value=4e-28 Score=247.35 Aligned_cols=309 Identities=16% Similarity=0.173 Sum_probs=220.1
Q ss_pred HHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEEEcC
Q 009517 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPI 222 (533)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv~~ 222 (533)
+.+++.+.+.. ..|.+..+..+|+++++++++ .+++++++|+++|+..+++.+ . ++||+|+++.
T Consensus 21 ~~~~~~~~~~~------~~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~~~~~~~~-~~gd~v~~~~ 85 (374)
T 3uwc_A 21 YLNDLREFIKT------ADFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDALAMSFKMLNI-GAGDEVITCA 85 (374)
T ss_dssp HHHHHHHHHHH------TCCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHHHTTC-CTTCEEEEES
T ss_pred HHHHHHHHHHc------CCcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCC-CCCCEEEECC
Confidence 77777777765 247778889999999999974 337899999999999999999 7 7999999999
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|+|+.+...+...|.+++.++++ .++.+|++++++++++ ++++|+ |+||||.+.+ +++|+++|++|
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~------~~~~v~---~~n~~G~~~~---~~~i~~~~~~~ 151 (374)
T 3uwc_A 86 NTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITD------KTKAIM---PVHYTGNIAD---MPALAKIAKKH 151 (374)
T ss_dssp SSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHT
T ss_pred CccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCC------CceEEE---EeCCcCCcCC---HHHHHHHHHHc
Confidence 99999999999999999999987 4678999999998876 788877 9999999987 88999999999
Q ss_pred CCEEEEcccccccc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCHHHHHHHHHh
Q 009517 303 GLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 303 ~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~~~~~~l~~~ 379 (533)
|+++|+||+|..+. +.+. +.. . ..| +++.||| |++ +.+|. +|++++ .++++.+.+...
T Consensus 152 ~~~li~D~~~~~g~~~~~~-~~~-------~----~~d---~~~~s~~~~K~l-~~~g~-~g~~~~--~~~~~~~~~~~~ 212 (374)
T 3uwc_A 152 NLHIVEDACQTILGRINDK-FVG-------S----WGQ---FACFSLHPLKNL-NVWSD-AGVIIT--HSDEYAEKLRLY 212 (374)
T ss_dssp TCEEEEECTTCTTCEETTE-ETT-------S----SSS---EEEEECSSSSSS-CCSSC-CEEEEE--SCHHHHHHHHHH
T ss_pred CCEEEEeCCCccCceeCCe-ecc-------c----ccc---EEEEeCCCCCcC-Cccce-eEEEEe--CCHHHHHHHHHH
Confidence 99999999998643 2221 100 0 133 6678866 998 54465 888887 356787777765
Q ss_pred hhc-------------cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ceEec-C
Q 009517 380 ASV-------------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG-ITCNK-A 444 (533)
Q Consensus 380 ~~~-------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~-~ 444 (533)
... .+..+.+.+.+....+ +.++.+.++.+++.+.+.+.|.++++ +.+.. +
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~--------------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 278 (374)
T 3uwc_A 213 RNHGLINRDVCVEYGINCRMDTIQAVIANRLM--------------NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR 278 (374)
T ss_dssp TBTTEEETTEESSCCCBCBCCHHHHHHHHHHG--------------GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred HhcCccccCccccccccCCCCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence 421 1112333333333322 22344566667778888999988866 66542 3
Q ss_pred CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-----------CC---------CCceEEE
Q 009517 445 EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-----------VP---------GTWHFRC 504 (533)
Q Consensus 445 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----------~~---------g~~~iRi 504 (533)
.++...|..+.+.. .+...+ .+.|.++||.+.+|..... .. ..+.+||
T Consensus 279 ~~~~~~~~~~~~~~-----------~~~~~l-~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl 346 (374)
T 3uwc_A 279 EGVYHVFHIYVLRV-----------KYRDQL-FQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITL 346 (374)
T ss_dssp TTEECCCSSEEEEE-----------TTHHHH-HHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEE
T ss_pred CCCceeeEEEEEEc-----------CCHHHH-HHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEc
Confidence 33333332222110 112333 3556678999998862100 00 0148999
Q ss_pred Eec--CCcCcHHHHHHHHHHHHHH
Q 009517 505 TIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 505 s~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
++. .++++|++++++|++++++
T Consensus 347 ~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 347 PAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 985 8899999999999998864
No 169
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=2.8e-27 Score=243.62 Aligned_cols=331 Identities=13% Similarity=0.091 Sum_probs=220.5
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+++++.+++.+..... ...|.......++++++.+.+.+.+| .+++.|++++| ++++..+++.++ ++||+
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g--~~~~~i~~~sG-t~a~~~a~~~~~-~~gd~ 111 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG--AEHANVQPHSG-AQANMAVYFTVL-EHGDT 111 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHC-CTTCE
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceEEEecCc-HHHHHHHHHHhc-CCCCE
Confidence 7899999888775311000 01122222244565434444444445 33444445665 999999999998 89999
Q ss_pred EEEcCCcCcchHH-H--HHHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 218 ILCPIPQYPLYSA-S--IALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 218 Vlv~~p~~~~~~~-~--~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
|+++.|+|+.+.. . +...| .+++.+++++ .++.+|+++|++++++. ++++|++ +|+|. |...+ +
T Consensus 112 Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~-~~~~~-~~~~~---l 180 (405)
T 2vi8_A 112 VLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLH-----RPKLIVA-AAAAY-PRIID---F 180 (405)
T ss_dssp EEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSC-CSCCC---H
T ss_pred EEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhc-----CCeEEEE-eCCCC-CccCC---H
Confidence 9999999988753 1 12333 4778887753 35789999999999864 6788776 55553 44444 8
Q ss_pred HHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~ 372 (533)
++|.++|++||+++|+||+|.......+..... + . ..| +++.||||+++|++| ||+++ ++++
T Consensus 181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~-~-----~~d---i~~~s~sK~~~g~~g---G~~~~---~~~~ 242 (405)
T 2vi8_A 181 AKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---V-P-----YAH---FVTTTTHKTLRGPRG---GMILC---QEQF 242 (405)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---T-T-----TCS---EEEEESSSTTCCCSC---EEEEE---CHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccccCcCCCc---c-c-----cCC---EEEEeccccCCCCCC---eEEEE---cHHH
Confidence 999999999999999999998432222111111 1 0 234 779999999844566 99998 8899
Q ss_pred HHHHHHhhh-ccccC-ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC-CceeE
Q 009517 373 REQIYKVAS-VNLCS-NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA-EGAMY 449 (533)
Q Consensus 373 ~~~l~~~~~-~~~~~-~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~gg~~ 449 (533)
++.+..... ...++ ++..+.++.++++. . ...+++.++++++++++++.+.|+++ |+.++.+ .++++
T Consensus 243 ~~~l~~~~~~~~~~~~~~~~~aa~~~al~~-------~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 312 (405)
T 2vi8_A 243 AKQIDKAIFPGIQGGPLMHVIAAKAVAFGE-------A--LQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHL 312 (405)
T ss_dssp HHHHHHHHTTTTCSSCCHHHHHHHHHHHHH-------H--HSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred HHHHHhhhcccccCCCCHHHHHHHHHHHHH-------H--HhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceE
Confidence 888877643 33333 44444554455421 0 01345778888999999999999998 8888775 45778
Q ss_pred EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC----CCCCCCCceEEEEec------CCcCcHHHHHHH
Q 009517 450 LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG----FGQVPGTWHFRCTIL------PQEDKIPAIVTR 519 (533)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~----f~~~~g~~~iRis~~------~~~e~i~~~~~~ 519 (533)
+|+.++.+ +. +...+ .+.|.++||.+.||.. ++ ..+.+++||++. .+++++++++++
T Consensus 313 ~~~~~~~~----------~~-~~~~~-~~~l~~~gi~v~~g~~~~~~~~-~~~~~~iRis~~~~~~~~~~~~~i~~~~~~ 379 (405)
T 2vi8_A 313 LLVDLRPQ----------QL-TGKTA-EKVLDEVGITVNKNTIPYDPES-PFVTSGIRIGTAAVTTRGFGLEEMDEIAAI 379 (405)
T ss_dssp EEEECGGG----------TC-CHHHH-HHHHHHHTEECEEECCTTCSSC-TTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred EEEEccCC----------CC-CHHHH-HHHHHHcCceeccCcCccccCC-CCCCCceEEeeeeeeecCCCHHHHHHHHHH
Confidence 88665411 11 22333 3556778999999863 32 122348999997 478999999999
Q ss_pred HHHHHHHH
Q 009517 520 LTDFHKNF 527 (533)
Q Consensus 520 l~~~l~~~ 527 (533)
|++++++.
T Consensus 380 l~~~~~~~ 387 (405)
T 2vi8_A 380 IGLVLKNV 387 (405)
T ss_dssp HHHHHTCT
T ss_pred HHHHHhcc
Confidence 99988654
No 170
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.96 E-value=2.7e-27 Score=245.15 Aligned_cols=326 Identities=14% Similarity=0.160 Sum_probs=224.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
|+++++++.+.+.+. ....|++..|..++++++++.+.+.+|.+ ++++++++++|+..+++.+ + ++||+|+
T Consensus 15 ~~~~~~a~~~~~~~~---~~~~~~~~~g~~~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~-~~gd~Vl 86 (418)
T 2c81_A 15 SDRTRRKIEEVFQSN---RWAISGYWTGEESMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGI-GEGDEVI 86 (418)
T ss_dssp CHHHHHHHHHHHHHT---CCSTTSBCCSSCCHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHhcC---CccccCcccCCHHHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCC-CCcCEEE
Confidence 789999999988762 12348887785555555555555555532 5667777889999999999 7 7999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|+.+...+...|++++.+++++ .+|.+|+++|++++++ ++++|+++ ||||...+ +++|+++|
T Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~~~ 153 (418)
T 2c81_A 87 VPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITD------KTKAIIPV---HLFGSMAN---MDEINEIA 153 (418)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCT------TEEEECCB---CCTTCCCC---HHHHHHHH
T ss_pred ECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCC------CCeEEEEe---CCcCCccc---HHHHHHHH
Confidence 999999999999999999999999875 3678999999999875 78888864 58998866 89999999
Q ss_pred HHcCCEEEEcccccccc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecC--CccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 300 KKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
+++|++||+||+|..+. +++. +.. . ..+ +.+.|| ||.+ |+ | |+||+++ .++++++.+
T Consensus 154 ~~~~~~li~D~a~~~~~~~~~~-~~~-------~----~~~---~~~~s~s~~K~~-~~-g-~~g~~~~--~~~~l~~~~ 213 (418)
T 2c81_A 154 QEHNLFVIEDCAQSHGSVWNNQ-RAG-------T----IGD---IGAFSCQQGKVL-TA-G-EGGIIVT--KNPRLFELI 213 (418)
T ss_dssp HHTTCEEEEECTTCTTCEETTE-ETT-------S----SSS---EEEEECCTTSSS-CS-S-SCEEEEE--SCHHHHHHH
T ss_pred HHCCCEEEEECcccccCccCCE-ecc-------c----ccc---eEEEeccCCccc-CC-C-CeEEEEE--CCHHHHHHH
Confidence 99999999999999875 5431 110 1 123 667788 9998 65 8 9999987 247888887
Q ss_pred HHhhhc-c------------cc--C---Ch--------HHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 377 YKVASV-N------------LC--S---NI--------SGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLE 430 (533)
Q Consensus 377 ~~~~~~-~------------~~--~---~~--------~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 430 (533)
...... . +. . .. ..+.+... ...+.++...++.+++++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~-------------~~l~~~~~~~~~~~~~~~~l~ 280 (418)
T 2c81_A 214 QQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILL-------------DQLQELDDKNAIREKNAMFLN 280 (418)
T ss_dssp HHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHH-------------HHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHH
Confidence 765431 1 11 0 00 01111110 012234556666677788899
Q ss_pred HHHhcCCCceEe-cCCc-eeEEe----cccCCCHHHHHHHHhcCCCChHHHHHHHHHccceE---EEcCCCCCC------
Q 009517 431 DAFNSLEGITCN-KAEG-AMYLF----PRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIV---LVPGSGFGQ------ 495 (533)
Q Consensus 431 ~~L~~~~g~~~~-~~~g-g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~---v~pg~~f~~------ 495 (533)
+.|.++||+.+. .+++ +...| +.++ .. ...+. +...+...+.+++||. +.+|.....
T Consensus 281 ~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~-~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~ 352 (418)
T 2c81_A 281 DALSKIDGIKVMKRPPQVSRQTYYGYVFRFD--PV-----KFGGL-NADQFCEILREKLNMGTFYLHPPYLPVHKNPLFC 352 (418)
T ss_dssp HHHTTSTTEEECCCCTTEEECCCSEEEEEEC--GG-----GTTTC-CHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCC
T ss_pred HHhccCCCcccCCCCCCCcccccEEEEEEEc--cc-----ccccc-CHHHHHHHHHHcCCCCcccccccccccccCchhc
Confidence 999988898887 4666 33332 3332 10 00011 2344444544433999 988752110
Q ss_pred ----CC--------------C---------CceEEEEec--C-CcCcHHHHHHHHHHHHHHHH
Q 009517 496 ----VP--------------G---------TWHFRCTIL--P-QEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 496 ----~~--------------g---------~~~iRis~~--~-~~e~i~~~~~~l~~~l~~~~ 528 (533)
.. + .+.|||++. . +++++++++++|+++++++.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 353 PWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp GGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 00 1 148999995 7 89999999999999887643
No 171
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=2e-27 Score=250.33 Aligned_cols=330 Identities=12% Similarity=0.078 Sum_probs=228.4
Q ss_pred CHHHHHHHHHHHhcCCCC---CccccCCCcccHHHHHHHHHHHHhhcCCCCCC--CCEEEcCChHHHHHHHHHHhccCCC
Q 009517 141 SADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADP--NDIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
|+.+++++.+.+.+.... ....|....+..++++.+.+++.+.+|.+.+. .+|++++|+ +++..++.+++ +||
T Consensus 57 ~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all-~pG 134 (483)
T 1rv3_A 57 SRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALV-EPH 134 (483)
T ss_dssp CHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHT-CTT
T ss_pred CHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhc-CCC
Confidence 788999988877652210 01124445556788988889988888855221 248888888 88888888888 899
Q ss_pred CeEEEcCCcCcchHH--------HHHHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 216 DGILCPIPQYPLYSA--------SIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~--------~~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
|+|++++|+|.++.. .+...| .++++++++++ ++.+|+++|+++++.. ++++|++ +++||+ .
T Consensus 135 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~-~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~ 206 (483)
T 1rv3_A 135 GRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD-TGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-R 206 (483)
T ss_dssp CEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-S
T ss_pred CEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC-CCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-C
Confidence 999999999887753 233444 45555555543 6789999999999843 7999998 999998 8
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccc-cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
+++ +++|+++|+++|+++|+|++|. ++.+.+..+ .++ . ..| +++.|++|+| +|+|.||++
T Consensus 207 ~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~-~p~----~-----~~d---iv~~s~~K~l---~GprgG~i~ 267 (483)
T 1rv3_A 207 NLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVP-SPF----E-----HCH---VVTTTTHKTL---RGCRAGMIF 267 (483)
T ss_dssp CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSC-CGG----G-----TCS---EEEEESSGGG---CCCSCEEEE
T ss_pred cCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCC-CCC----C-----CCc---EEEecCcccC---CCCCceEEE
Confidence 887 8999999999999999999975 444433211 111 1 134 7789999987 388999999
Q ss_pred EecCCH---------------HHHHHHHHhhh--ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 009517 365 VTGFSA---------------EVREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (533)
Q Consensus 365 ~~~~~~---------------~~~~~l~~~~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (533)
+ ++ ++...+..... ...+++.....+...++... ...+++.+.++++++++
T Consensus 268 ~---~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~---------~~~~~~~~~~~~~~~~~ 335 (483)
T 1rv3_A 268 Y---RRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA---------MTPEFKEYQRQVVANCR 335 (483)
T ss_dssp E---ECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH---------TSHHHHHHHHHHHHHHH
T ss_pred E---cchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHH---------hChhHHHHHHHHHHHHH
Confidence 8 43 24444433221 12334444444444444210 01245677888899999
Q ss_pred HHHHHHhcCCCceEecCC-ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEE----cCCCCCCCCCCceE
Q 009517 428 TLEDAFNSLEGITCNKAE-GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLV----PGSGFGQVPGTWHF 502 (533)
Q Consensus 428 ~l~~~L~~~~g~~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~g~~~i 502 (533)
++.+.|.++ |+.++.+. +.++.|+++... +. +... +.++|++.||.+. ||..+. -+.+++
T Consensus 336 ~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~----------g~-~~~~-~~~~L~~~gI~v~~~~~pg~~~~--~~~~~i 400 (483)
T 1rv3_A 336 ALSAALVEL-GYKIVTGGSDNHLILVDLRSK----------GT-DGGR-AEKVLEACSIACNKNTCPGDKSA--LRPSGL 400 (483)
T ss_dssp HHHHHHHHT-TCEEGGGSCSSSEEEEEGGGG----------TC-CHHH-HHHHHHHTTEECEEECCSSCSCT--TSCCEE
T ss_pred HHHHHHHhc-CCEeccCCCCCceEEEeccCC----------CC-CHHH-HHHHHHhCCcEEecCCCCCCCcC--CCCceE
Confidence 999999998 99887763 346777666421 12 1233 3467788999999 987422 123489
Q ss_pred EEEec--CC----cCcHHHHHHHHHHHHHH
Q 009517 503 RCTIL--PQ----EDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 503 Ris~~--~~----~e~i~~~~~~l~~~l~~ 526 (533)
||++. .+ ++++++++++|+++++.
T Consensus 401 Ris~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 401 RLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 99996 35 78999999999999876
No 172
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.96 E-value=6.9e-28 Score=250.08 Aligned_cols=321 Identities=15% Similarity=0.146 Sum_probs=211.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH---hccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL---LIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~---l~~~~gd~ 217 (533)
|+++++++.+++.+. . .|. +..++++++++.+.+.++ .+++|++++|+++|+..+++. +. ++++
T Consensus 70 ~p~v~~a~~~~~~~~----~-~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~~~al~~ar~~~--~~~~ 136 (424)
T 2e7u_A 70 HPKVLARVRETLERG----L-TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEATMSALRLARGYT--GRPY 136 (424)
T ss_dssp CHHHHHHHHHHHHTC----S-CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHHHHHHHHHHHHH--CCCE
T ss_pred CHHHHHHHHHHHHhC----C-CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhh--CCCE
Confidence 789999999998762 1 122 234556666666665543 468999999999999999986 43 4588
Q ss_pred EEEcCCcCcchHHHHHH--------------hCC------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe
Q 009517 218 ILCPIPQYPLYSASIAL--------------HGG------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI 277 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~--------------~g~------~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~ 277 (533)
|++.+|+|+++...+.. .|. .++.++. .|+++|++.+++. +.++++|+ +
T Consensus 137 vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~vi-~ 205 (424)
T 2e7u_A 137 IVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRR---GEEIAAII-F 205 (424)
T ss_dssp EEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHH---GGGEEEEE-E
T ss_pred EEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhC---CCCEEEEE-E
Confidence 99999999986543221 121 2444442 3899999999753 11455555 5
Q ss_pred CCCC-CCccC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCC
Q 009517 278 NPGN-PTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (533)
Q Consensus 278 ~p~N-PtG~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl 355 (533)
+|+| +||.+ .+++++++|.++ ++||+++|+||+|++| +.+. ...+ .. ..+ .+| +.||||++ |
T Consensus 206 ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~--~~~~-~~-~~~---~~d-----i~s~sK~l-~- 269 (424)
T 2e7u_A 206 EPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAF--GGAT-EL-LGL---KPD-----LVTLGKIL-G- 269 (424)
T ss_dssp CSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSST--THHH-HH-HTC---CCS-----EEEECGGG-G-
T ss_pred eCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccch--hHHH-HH-hCC---Ccc-----hhhhhhhh-h-
Confidence 5654 49975 479999999999 9999999999999997 4332 1111 11 112 456 34999999 5
Q ss_pred CCCeeEEEEEecCCHHHHHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 356 CGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLED 431 (533)
Q Consensus 356 ~G~riG~v~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 431 (533)
+|+|+||+++ ++++++.+... ...++++++++++++.++|+ ..+..+.+.++++++++++++
T Consensus 270 ~G~~~G~~~~---~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~-----------~~~~~~~~~~~~~~~~~~l~~ 335 (424)
T 2e7u_A 270 GGLPAAAYAG---RREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLE-----------LLEENPGYYAYLEDLGARLEA 335 (424)
T ss_dssp TTSSCEEEEE---CHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHH-----------HHHHCTHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEE---cHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHH-----------HHHhccHHHHHHHHHHHHHHH
Confidence 4999999998 89998877652 22567889999999888874 111124466677777778777
Q ss_pred HHhcC---CCc-eEecCCceeEEecccCC-CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe
Q 009517 432 AFNSL---EGI-TCNKAEGAMYLFPRIQL-PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI 506 (533)
Q Consensus 432 ~L~~~---~g~-~~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~ 506 (533)
.|+++ .++ ..+++.|. ++|+.+.. +.....+...........++..+ .++||.+.||.. ..+|+++
T Consensus 336 ~L~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~-------~~~~~~~ 406 (424)
T 2e7u_A 336 GLKEVLKEKGLPHTVNRVGS-MITVFFTEGPVVTFQDARRTDTELFKRFFHGL-LDRGIYWPPSNF-------EAAFLSV 406 (424)
T ss_dssp HHHHHHHHTTCCCEEEEETT-EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HTTTEECCSSSS-------SCEECCT
T ss_pred HHHHHHHhCCCceEEEeece-EEEEEEeCCCCcchhhhcccCHHHHHHHHHHH-HHCCeEEeccCC-------CceEeec
Confidence 77664 133 33556655 56765542 10000000000000123444444 478999998642 1478887
Q ss_pred cCCcCcHHHHHHHHHHHH
Q 009517 507 LPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 507 ~~~~e~i~~~~~~l~~~l 524 (533)
..+++++++++++|++++
T Consensus 407 ~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 407 AHREEDVEKTLEALRKAL 424 (424)
T ss_dssp TCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHhC
Confidence 799999999999998763
No 173
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=1.5e-27 Score=244.87 Aligned_cols=321 Identities=15% Similarity=0.157 Sum_probs=225.6
Q ss_pred eeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcCCCCCccccC-CCcccHHHHHHHH
Q 009517 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYS-HSQGIKGLRDTIA 177 (533)
Q Consensus 99 ~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~-~~~G~~~lr~aia 177 (533)
+++++.|.|.. ++++.+++.+.+.. ..|. +..+..+||++++
T Consensus 24 ~~~l~~~~p~~-------------------------------~~~~~~a~~~~~~~------~~~~~~~~~~~~l~~~la 66 (391)
T 3dr4_A 24 LPRISVAAPRL-------------------------------DGNERDYVLECMDT------TWISSVGRFIVEFEKAFA 66 (391)
T ss_dssp ----CCCCCCC-------------------------------CSSHHHHHHHHHHH------TCCSSCSHHHHHHHHHHH
T ss_pred CceeccCCCCC-------------------------------CHHHHHHHHHHHHc------CCccCCChHHHHHHHHHH
Confidence 88999999875 67788888887765 2355 6778999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHH
Q 009517 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (533)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~ 256 (533)
++++ .+++++++||++|+..+++.+ + .+||+|+++.|+|+.+...+...|++++.++++++ ++.+|+++
T Consensus 67 ~~~~--------~~~~i~~~~gt~al~~~l~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~ 136 (391)
T 3dr4_A 67 DYCG--------VKHAIACNNGTTALHLALVAMGI-GPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPR-TFNLDAAK 136 (391)
T ss_dssp HHHT--------CSEEEEESSHHHHHHHHHHHHTC-CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGG
T ss_pred HHhC--------CCcEEEeCCHHHHHHHHHHHcCC-CCcCEEEECCCchHHHHHHHHHCCCEEEEEecCcc-ccCcCHHH
Confidence 9985 237888999999999999999 7 79999999999999999999999999999999754 67899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-cccCCCCcccHHHHHhhcCC
Q 009517 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN-VYVPEKKFHSFKKVSRSMGY 335 (533)
Q Consensus 257 l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~-~~~~~~~~~~~~~~~~~~~~ 335 (533)
+++++++ ++++|+ |+||||.+.+ +++|+++|+++|+++|+|++|... .+.+. +. ..
T Consensus 137 l~~~~~~------~~~~v~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~-------~~--- 193 (391)
T 3dr4_A 137 LEALITP------RTKAIM---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGK-KS-------GS--- 193 (391)
T ss_dssp SGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE-ET-------TS---
T ss_pred HHHhcCC------CceEEE---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCe-ee-------cc---
Confidence 9998875 788887 5789999887 889999999999999999999853 33221 10 00
Q ss_pred CCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhcc---------------ccCChHHHHHHHHHc
Q 009517 336 GEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN---------------LCSNISGQILASLVM 398 (533)
Q Consensus 336 ~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~q~a~~~~L 398 (533)
..| +.+.||| |++ +|.++||+++ .++++++.+..+.... +..+.+.++++...+
T Consensus 194 -~~d---i~~~S~s~~K~l---~~g~gg~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~ 264 (391)
T 3dr4_A 194 -LGD---CATFSFFGNAII---TTGEGGMITT--NDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQL 264 (391)
T ss_dssp -SSS---EEEEECBTTSSS---CCBSCEEEEE--SCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHH
T ss_pred -cCC---EEEEECCCCCcC---CcCCeEEEEE--CCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHH
Confidence 123 6677877 766 3567899887 3566877776654211 223333333322222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC------Ccee-EEecccCCCHHHHHHHHhcCCCC
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA------EGAM-YLFPRIQLPEKAIKAAEAEKTVP 471 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~------~gg~-~~~~~~~~~~~~~~~~~~~~~~~ 471 (533)
+.++++.++.++.++++.+.|.++ |+.+..+ ..++ .+++.++... +. +
T Consensus 265 --------------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~-~ 319 (391)
T 3dr4_A 265 --------------ERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL---------ST-T 319 (391)
T ss_dssp --------------HTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC---------SS-C
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc---------ch-h
Confidence 334556667777888899999988 8776654 2222 2233332100 11 1
Q ss_pred hHHHHHHHHHccceEEEcCCCC---CC---C-----------CCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 472 DAFYCRRLLNATGIVLVPGSGF---GQ---V-----------PGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 472 ~~~~~~~ll~~~gV~v~pg~~f---~~---~-----------~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
...+. +.|.++||.+.+|... .. . .....+||++. .++++|++++++|++++
T Consensus 320 ~~~l~-~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 320 RDQVI-KDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HHHHH-HHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHH-HHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 23333 5566789999987521 00 0 01347999985 89999999999988754
No 174
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.92 E-value=1.1e-30 Score=271.55 Aligned_cols=360 Identities=11% Similarity=0.029 Sum_probs=237.9
Q ss_pred cchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHh
Q 009517 74 GEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILD 153 (533)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~ 153 (533)
+.++.++++...++.||++ +|||..|.... ..+++ ++++++++.+++.
T Consensus 83 p~~~~~~~G~~l~D~dG~~------yiD~~~~~~~~----------------------~lGh~----~p~V~~Av~~q~~ 130 (465)
T 2yky_A 83 PLVIAQGTGSRFQDVDGHA------YVNFLGEYTAG----------------------LFGHS----HPVIRAAVERALA 130 (465)
Confidence 3467888888888888888 77776665321 11111 5888999988887
Q ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC-CCeEEEcCCcCcchHHHH
Q 009517 154 QIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE-NDGILCPIPQYPLYSASI 232 (533)
Q Consensus 154 ~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~-gd~Vlv~~p~~~~~~~~~ 232 (533)
+.. ...|+. ....+|.+.+++++. ..++++++++|++|++.+++.+...+ +++|++.+++|+++...+
T Consensus 131 ~~~---~~~~~~-~~~~~Lae~L~~~~p-------~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~ 199 (465)
T 2yky_A 131 VGL---NLSTQT-ENEALFAEAVCDRFP-------SIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNF 199 (465)
Confidence 621 223433 335677777777652 25789999999999999999864223 489999999999877644
Q ss_pred H----HhCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCE
Q 009517 233 A----LHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLV 305 (533)
Q Consensus 233 ~----~~g~--~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~ 305 (533)
. ..|. .++.++. -|++.|++++++. +.++++|+++..+|+||. +.+++.+++|+++|++||++
T Consensus 200 ~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~l 269 (465)
T 2yky_A 200 ASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGAL 269 (465)
Confidence 3 1232 2222322 2789999998742 126888888765666996 55688899999999999999
Q ss_pred EEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHH-----h-
Q 009517 306 LLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK-----V- 379 (533)
Q Consensus 306 lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~-----~- 379 (533)
+|+||+|+ +.. +. ...+..+ .+ .+| +.||||.+ |. |+|+||+++ ++++++.+.. .
T Consensus 270 lI~DEv~~-~r~-g~--~~a~~~~--gv---~pD-----i~t~sK~l-g~-G~piG~v~~---~~~i~~~l~~~~~g~~~ 330 (465)
T 2yky_A 270 LIFDEVMT-SRL-SG--GGAQEML--GI---SAD-----LTTLGKYI-GG-GMSFGAFGG---RRDLMERFDPARDGAFA 330 (465)
Confidence 99999999 743 31 1111111 11 344 56899999 53 999999998 8999998876 2
Q ss_pred hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--Cc-eEecCCceeEEecccC
Q 009517 380 ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL-E--GI-TCNKAEGAMYLFPRIQ 455 (533)
Q Consensus 380 ~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~-~~~~~~gg~~~~~~~~ 455 (533)
...+++.++++|+++.++|+... . +.+.++++++.+++++.|+++ . ++ ..+++.| .++|+.+.
T Consensus 331 ~~~T~~~npla~aAa~aaL~~l~-----------~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G-~~~~i~~~ 397 (465)
T 2yky_A 331 HAGTFNNNILTMSAGHAALTQIY-----------T-RQAASDLSASGDRFRANLNRIAVENQAPLQFTGLG-SLGTIHFS 397 (465)
Confidence 33678899999999988885321 1 345666777777777777665 1 22 2244444 45554443
Q ss_pred C-CHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCcHHHHHHHHHHHHHHHH
Q 009517 456 L-PEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 456 ~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 528 (533)
. +.................++..++ ++||++.|+. |+ . +++..++++|++++++|+++++++.
T Consensus 398 ~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~~------~--~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 398 RAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-MY------A--LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 1 100000000000011234454554 6899999865 32 1 6777999999999999999988764
No 175
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=2.8e-26 Score=237.63 Aligned_cols=329 Identities=12% Similarity=0.078 Sum_probs=204.9
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccCCCcccHHHHHHHH-HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIA-AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia-~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd 216 (533)
|+.+++++.+++.+..... ...|.... ..++.++++ +.+.+.+| .+. ..++++||++++..+++.++ ++||
T Consensus 45 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~--~~~-~~v~~~~Gs~a~~~al~~~~-~~gd 119 (425)
T 3ecd_A 45 SRAVLDAQGSVLTNKYAEGYPGKRYYGGCE-FADEVEALAIERVKRLFN--AGH-ANVQPHSGAQANGAVMLALA-KPGD 119 (425)
T ss_dssp CHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHT--CSE-EECCCSSHHHHHHHHHHHHC-CTTC
T ss_pred CHHHHHHHhhhhhcccccCCCcchhcCCCh-HHHHHHHHHHHHHHHHhC--CCC-ceeecCchHHHHHHHHHHcc-CCCC
Confidence 7899999888775321100 01122221 112333333 44544444 222 22458888999999999998 8999
Q ss_pred eEEEcCCcCcc---hHHHHHHhCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHH
Q 009517 217 GILCPIPQYPL---YSASIALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (533)
Q Consensus 217 ~Vlv~~p~~~~---~~~~~~~~g~--~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~ 291 (533)
+|+++.|+|+. +.......|. +++.++.++ +++++|+++|++++++. ++++|++++|+||+. .+
T Consensus 120 ~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~~--~~--- 188 (425)
T 3ecd_A 120 TVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQH-----KPSLIIAGFSAYPRK--LD--- 188 (425)
T ss_dssp EEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHH-----CCSEEEEECSCCCSC--CC---
T ss_pred EEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhc-----CCcEEEEccccCCCc--CC---
Confidence 99999999987 3323224454 555666553 36799999999999854 789999999999753 33
Q ss_pred HHHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC-
Q 009517 292 QRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS- 369 (533)
Q Consensus 292 l~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~- 369 (533)
+++|+++|++||+++|+||+| .++.+.+. . ... .. ..| |++.||||++ +|+|+||+++ +
T Consensus 189 l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~-~~~---~~-----~~d---i~~~s~sK~l---~g~~~g~~~~---~~ 249 (425)
T 3ecd_A 189 FARFRAIADSVGAKLMVDMAHIAGVIAAGR-H-ANP---VE-----HAH---VVTSTTHKTL---RGPRGGFVLT---ND 249 (425)
T ss_dssp HHHHHHHHHHHTCEEEEECGGGHHHHHTTS-S-CCG---GG-----TCS---EEEEESSGGG---CCCSCEEEEE---SC
T ss_pred HHHHHHHHHHcCCEEEEECcChHhhhhccc-c-cCc---hh-----cCc---EEEecCCccc---CCCCcEEEEe---CC
Confidence 789999999999999999995 55445432 1 111 11 123 7799999987 3789999998 5
Q ss_pred HHHHHHHHHhhhc--cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC-Cc
Q 009517 370 AEVREQIYKVASV--NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA-EG 446 (533)
Q Consensus 370 ~~~~~~l~~~~~~--~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~g 446 (533)
+++.+.+...... ..+++...+.++..++.. ...++++.+.++++++++++.+.|.+. |+.+..+ .+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 319 (425)
T 3ecd_A 250 EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGE---------ALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTD 319 (425)
T ss_dssp HHHHHHHHHHHC-----CCCHHHHHHHHHHHHH---------HTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCS
T ss_pred HHHHHHHHhhhCccccCCccHHHHHHHHHHHHH---------HHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCC
Confidence 6777777665432 223344343333333210 011345677788889999999999986 8888764 45
Q ss_pred eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEE----cCCCCCCCCCCceEEEEec------CCcCcHHHH
Q 009517 447 AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLV----PGSGFGQVPGTWHFRCTIL------PQEDKIPAI 516 (533)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~g~~~iRis~~------~~~e~i~~~ 516 (533)
++++|+.+..+ ..+...+.+.|+++||.+. ||..+. ....+.+|+++. .++++++++
T Consensus 320 ~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~v~~~~~p~~~~~-~~~~~~iRi~~~~~~~~~~~~e~i~~~ 386 (425)
T 3ecd_A 320 NHLLLVDLRPK------------GLKGAQVEQALERAGITCNKNGIPFDPEK-PTITSGIRLGTPAGTTRGFGAAEFREV 386 (425)
T ss_dssp SSEEEEECGGG------------TCCHHHHHHHHHHTTEECEECCCTTCSSC-TTTCSEEEEESHHHHHTTCCHHHHHHH
T ss_pred ceEEEEEeCCC------------CCCHHHHHHHHHHcCCEecccccCCCCCC-CCCccceeccchhheeccCCHHHHHHH
Confidence 66777654311 0122334566788999999 443322 122348999963 347899999
Q ss_pred HHHHHHHHHHH
Q 009517 517 VTRLTDFHKNF 527 (533)
Q Consensus 517 ~~~l~~~l~~~ 527 (533)
+++|++++++.
T Consensus 387 ~~~l~~~l~~~ 397 (425)
T 3ecd_A 387 GRLILEVFEAL 397 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999988775
No 176
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.95 E-value=2.7e-27 Score=249.01 Aligned_cols=324 Identities=16% Similarity=0.140 Sum_probs=231.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC---CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc---cCC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RSE 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~~ 214 (533)
.+.+++++.+.+. ..+.|.+ ..|..++++++++++.+.+|.+. .+++++|+++++..++.++. .++
T Consensus 79 ~p~v~~~~~~~~~-----~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~~~ 150 (474)
T 1wyu_B 79 NPKLHEEAARLFA-----DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHGELTGILIIRAYHEDR 150 (474)
T ss_dssp CCHHHHHHHHTTS-----SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHH-----hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHHhc
Confidence 3566777665522 1344554 67888999999999998888542 36788999999998666542 147
Q ss_pred CC-----eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 215 ND-----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 215 gd-----~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
|| +|+++.|+|+.+...+...|++++.+++++ ++.+|+++|++++++ ++++|++++| ||||.+.
T Consensus 151 Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~------~t~~v~~~~p-n~~G~~~-- 219 (474)
T 1wyu_B 151 GEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGP------HVAALMLTNP-NTLGLFE-- 219 (474)
T ss_dssp TCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCST------TEEEEEECSS-CTTSCCC--
T ss_pred CCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCC------CceEEEEECC-CCCcccC--
Confidence 77 999999999999999999999999999864 568999999999976 7999999998 6899883
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC-C---CeeEEEEE
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC-G---KRGGYMEV 365 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~-G---~riG~v~~ 365 (533)
+.+++|+++|++||+++|+||+|..+.+ +. .+... + ..| +++.|++|+| ++| | .|+||+++
T Consensus 220 ~~l~~i~~l~~~~g~~li~Dea~~~~~~-g~---~~~~~----~---g~d---i~~~s~~K~~-~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 220 RRILEISRLCKEAGVQLYYDGANLNAIM-GW---ARPGD----M---GFD---VVHLNLHKTF-TVPHGGGGPGSGPVGV 284 (474)
T ss_dssp TTHHHHHHHHHHHTCEEEEEGGGGGGTT-TT---CCHHH----H---TCS---EEECCTTTTT-CCCCTTSCCCCCCEEE
T ss_pred CCHHHHHHHHHHcCCEEEEeCchhhhhc-cC---CCccc----C---CCc---EEEEeCcccc-ccCCCCCCCCeEEEEE
Confidence 3499999999999999999999987654 21 12222 2 234 7788999998 555 5 59999998
Q ss_pred ecCCHHHHHHHHH-hh------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 009517 366 TGFSAEVREQIYK-VA------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (533)
Q Consensus 366 ~~~~~~~~~~l~~-~~------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (533)
++++++.+.. .. . ..++++.+++.++..++.. .-.+.++++.+++.++
T Consensus 285 ---~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~---------~g~~~l~~~~~~~~~~ 352 (474)
T 1wyu_B 285 ---KAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRT---------LGLEGLKKAAALAVLN 352 (474)
T ss_dssp ---CGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHH
T ss_pred ---cHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHH
Confidence 7777765541 10 0 1234566777766666521 0124466778889999
Q ss_pred HHHHHHHHhcCCCceEecCCceeE-EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEE
Q 009517 426 AKTLEDAFNSLEGITCNKAEGAMY-LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRC 504 (533)
Q Consensus 426 ~~~l~~~L~~~~g~~~~~~~gg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRi 504 (533)
++++.+.|+++ |+.+..+...+. +|+++ +.+ .+...++..++ ++||.+ |+..|+ ....+++||
T Consensus 353 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~~~----------~~~~~l~~~L~-~~Gi~~-~~~~~~-~~~~~~lRi 416 (474)
T 1wyu_B 353 ARYLKELLKEK-GYRVPYDGPSMHEFVAQP--PEG----------FRALDLAKGLL-ELGFHP-PTVYFP-LIVKEALMV 416 (474)
T ss_dssp HHHHHHHHHHT-TCBCSSCSSCCSCEEEBC--STT----------CCHHHHHHHHH-HTTCCC-CEESCS-TTSTTCEEE
T ss_pred HHHHHHHHhhc-CcEecCCCCcceEEEEEc--CCC----------CCHHHHHHHHH-HCCccc-cccccc-cccCCEEEE
Confidence 99999999988 887643333331 44444 111 12344555554 569985 666664 222448999
Q ss_pred Eec--CCcCcHHHHHHHHHHHHHH
Q 009517 505 TIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 505 s~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
++. .+++++++++++|++++++
T Consensus 417 s~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 417 EPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EeecCCCHHHHHHHHHHHHHHHHh
Confidence 997 4888999999999988753
No 177
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=1.7e-26 Score=236.48 Aligned_cols=286 Identities=13% Similarity=0.142 Sum_probs=206.5
Q ss_pred CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEE
Q 009517 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLV 240 (533)
Q Consensus 165 ~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~ 240 (533)
+..+..+|+++++++++ .+ +.|++++| ++|+..+++.+. ++||+|+++.|+|++.... ++..|.+++
T Consensus 50 ~~~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~ 120 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL 120 (386)
T ss_dssp CCHHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHHHTTTSCEEE
T ss_pred CCccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHh-CCCCEEEEecCCcHhHHHHHHHHHHhcCCEEE
Confidence 34567899999999985 22 56666555 899999999987 7999999999999974443 356788988
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCC
Q 009517 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (533)
Q Consensus 241 ~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~ 320 (533)
.++.+ |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..+.+..
T Consensus 121 ~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 183 (386)
T 1cs1_A 121 FVDQG-------DEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN- 183 (386)
T ss_dssp EECTT-------CHHHHHHHHHT------CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EeCCC-------CHHHHHHhhcc------CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 88753 79999999976 7899999999999999997 8999999999999999999999865421
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCH-HHHHHHHHhhh-ccccCChHHHHHHHHH
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSA-EVREQIYKVAS-VNLCSNISGQILASLV 397 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~-~~~~~l~~~~~-~~~~~~~~~q~a~~~~ 397 (533)
++ .+ ..+ +++.|+||.+ +.+|.|+ ||+++ ++ ++++.+..... .+.+.+++.++++...
T Consensus 184 ----~~-----~~---~~d---i~~~s~sK~~-~~~~~~~~G~~~~---~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
T 1cs1_A 184 ----PL-----AL---GAD---LVLHSCTKYL-NGHSDVVAGVVIA---KDPDVVTELAWWANNIGVTGGAFDSYLLLRG 244 (386)
T ss_dssp ----GG-----GG---TCS---EEEEETTTTT-TCSSCCCCEEEEE---SSHHHHHHHHHHHHHHTCBCCHHHHHHHHHH
T ss_pred ----cc-----cc---Cce---EEEEcCcccc-cCCCCceeEEEEe---CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 11 11 234 7899999998 6688887 99988 64 88888877654 3456788888777666
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe------------------cCCceeEEecccCCCHH
Q 009517 398 MSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN------------------KAEGAMYLFPRIQLPEK 459 (533)
Q Consensus 398 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~------------------~~~gg~~~~~~~~~~~~ 459 (533)
++. +....+.+.++++.+.+.|++++.+..+ ...++++.| .+..
T Consensus 245 l~~--------------~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 306 (386)
T 1cs1_A 245 LRT--------------LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSF-ELDG--- 306 (386)
T ss_dssp HTT--------------HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE-EESS---
T ss_pred ccH--------------HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEE-EECC---
Confidence 531 2334455666777777887776444322 123666554 2331
Q ss_pred HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCC----------------CC--------CCCceEEEEecCCcCcHHH
Q 009517 460 AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFG----------------QV--------PGTWHFRCTILPQEDKIPA 515 (533)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~----------------~~--------~g~~~iRis~~~~~e~i~~ 515 (533)
..+ .+...|.++||.+.+++ || .. ...+++|||++. ++.++
T Consensus 307 -----------~~~-~~~~~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~ 371 (386)
T 1cs1_A 307 -----------DEQ-TLRRFLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGED 371 (386)
T ss_dssp -----------CHH-HHHHHHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHH
T ss_pred -----------CHH-HHHHHHHhCCcceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHH
Confidence 112 24466778999887421 22 00 113599999986 56788
Q ss_pred HHHHHHHHHHHHH
Q 009517 516 IVTRLTDFHKNFM 528 (533)
Q Consensus 516 ~~~~l~~~l~~~~ 528 (533)
.+++|.++++++.
T Consensus 372 ~i~~l~~al~~~~ 384 (386)
T 1cs1_A 372 LIADLENGFRAAN 384 (386)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 8888888887653
No 178
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2e-26 Score=237.57 Aligned_cols=283 Identities=13% Similarity=0.119 Sum_probs=202.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~ 244 (533)
..+|++.++++. | .+++++++||++|+..+++.++ ++||+|+++.|+|+++...+.. .|.+++.++.
T Consensus 83 ~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 83 VSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALL-GAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTC-CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence 445555555554 4 3678999999999999999998 8999999999999998777644 8999999986
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+ |+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|....+.. +
T Consensus 154 ~-------d~~~l~~ai~~------~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~--~-- 213 (414)
T 3ndn_A 154 D-------DLSQWERALSV------PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQ--G-- 213 (414)
T ss_dssp T-------CHHHHHHHTSS------CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC--C--
T ss_pred C-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCC--c--
Confidence 4 79999999976 7999999999999999988 8899999999999999999998533211 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHH-HHHHhhh-ccccCChHHHHHHHHHcCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVRE-QIYKVAS-VNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~a~~~~L~~~ 401 (533)
+ .. ..+ +++.|+||.+ |.+| +++||+++ +++.+. .+..... ...+.++..++++...++
T Consensus 214 -~-----~~---g~d---iv~~S~sK~l-~~~G~~~~G~vv~---~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-- 275 (414)
T 3ndn_A 214 -F-----PL---GVD---VVVYSGTKHI-DGQGRVLGGAILG---DREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-- 275 (414)
T ss_dssp -G-----GG---TCS---EEEEETTTTT-TCSSCCCCEEEEE---CHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG--
T ss_pred -h-----hc---CCC---eEeccCCccc-cCCCCceEEEEEE---CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH--
Confidence 0 11 123 7799999999 6678 89999998 777765 5654433 334456666655555442
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-cCC----------------ceeEEecccCCC----HHH
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN-KAE----------------GAMYLFPRIQLP----EKA 460 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~----------------gg~~~~~~~~~~----~~~ 460 (533)
.+....++..++++.+.+.|++.|++..+ .|. .|.++++.++.. ..
T Consensus 276 ------------~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~- 342 (414)
T 3ndn_A 276 ------------TLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQ- 342 (414)
T ss_dssp ------------GHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHH-
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHH-
Confidence 23444556677788899999888776533 221 344566555421 10
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--------------------CCCCceEEEEecCCcCcHHHHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--------------------VPGTWHFRCTILPQEDKIPAIVTRL 520 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--------------------~~g~~~iRis~~~~~e~i~~~~~~l 520 (533)
....+ ...|+..++.+.+|..+.. .-..++||||++. |+++.+++.|
T Consensus 343 ----------~~~~~-~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl 409 (414)
T 3ndn_A 343 ----------RAFEV-LDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADI 409 (414)
T ss_dssp ----------HHHHH-HHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHH
T ss_pred ----------HHHHH-HHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHH
Confidence 11223 3445567888888876531 1124589999985 5678888888
Q ss_pred HHHH
Q 009517 521 TDFH 524 (533)
Q Consensus 521 ~~~l 524 (533)
++++
T Consensus 410 ~~al 413 (414)
T 3ndn_A 410 DRAL 413 (414)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8876
No 179
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=1.3e-26 Score=236.07 Aligned_cols=314 Identities=12% Similarity=0.100 Sum_probs=224.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh---ccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---IRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---~~~~gd~ 217 (533)
|+++++++.+.+... .|.+..+..+++++++++++ . +++++|+|+++|+..+++++ . ++||+
T Consensus 12 ~~~v~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~-~~gd~ 76 (375)
T 2fnu_A 12 DKEDKKAVLEVLNSK------QLTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFS-ADRNE 76 (375)
T ss_dssp CHHHHHHHHHHHTSS------CCSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCC-TTSCE
T ss_pred CHHHHHHHHHHHHcC------cccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccC-CCCCE
Confidence 789999998888651 23445568899999999985 2 38999999999999999999 6 79999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|+.+...+...|++++.++++++ + .+|+++|++++++ ++++|++++| ||.+.+ +++|.+
T Consensus 77 Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~-~~d~~~l~~~i~~------~~~~v~~~~~---tG~~~~---l~~i~~ 142 (375)
T 2fnu_A 77 IITTPISFVATANMLLESGYTPVFAGIKND-G-NIDELALEKLINE------RTKAIVSVDY---AGKSVE---VESVQK 142 (375)
T ss_dssp EEECSSSCTHHHHHHHHTTCEEEECCBCTT-S-SBCGGGSGGGCCT------TEEEEEEECG---GGCCCC---HHHHHH
T ss_pred EEECCCccHhHHHHHHHCCCEEEEeccCCC-C-CCCHHHHHhhcCc------CceEEEEeCC---cCCccC---HHHHHH
Confidence 999999999999999999999999998764 2 7899999998865 7899888877 999988 899999
Q ss_pred HHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCHHHHHH
Q 009517 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQ 375 (533)
Q Consensus 298 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~~~~~~ 375 (533)
+|++||+++|+||+|..+..... .. + .. .++ +.+.||| |.+ |+ | +|++++. .++++++.
T Consensus 143 l~~~~~~~li~D~a~~~~~~~~~---~~---~-~~----~~~---i~~~s~s~~K~~-~~-g--~g~~~~~-~~~~~~~~ 203 (375)
T 2fnu_A 143 LCKKHSLSFLSDSSHALGSEYQN---KK---V-GG----FAL---ASVFSFHAIKPI-TT-A--EGGAVVT-NDSELHEK 203 (375)
T ss_dssp HHHHHTCEEEEECTTCTTCEETT---EE---T-TS----SSS---EEEEECCTTSSS-CC-S--SCEEEEE-SCHHHHHH
T ss_pred HHHHcCCEEEEECccccCCeECC---ee---c-cc----cCC---eEEEeCCCCCCc-cc-c--CceEEEe-CCHHHHHH
Confidence 99999999999999986433211 00 1 01 123 6788898 988 64 6 6777762 13778888
Q ss_pred HHHhhh-cc----------------ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009517 376 IYKVAS-VN----------------LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG 438 (533)
Q Consensus 376 l~~~~~-~~----------------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 438 (533)
+..... .. +..+.+...++...+ +.++.+.++++++++++.+.|++++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--------------~~~~~~~~~~~~~~~~l~~~L~~~~~ 269 (375)
T 2fnu_A 204 MKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQL--------------KKAPFLMQKREEAALTYDRIFKDNPY 269 (375)
T ss_dssp HHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHH--------------TTHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 876542 11 123333333332222 22455677788889999999999888
Q ss_pred ceEecC----Cce-eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC-------CC-------CC---
Q 009517 439 ITCNKA----EGA-MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG-------FG-------QV--- 496 (533)
Q Consensus 439 ~~~~~~----~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~-------f~-------~~--- 496 (533)
+.+..+ .++ +++|+.++.. + ..+...+. +.|.++||.+..+.. |+ .+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~l~-~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 338 (375)
T 2fnu_A 270 FTPLHPLLKDKSSNHLYPILMHQK-F---------FTCKKLIL-ESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAE 338 (375)
T ss_dssp EEESGGGCSSCCCCSCEEEEECGG-G---------GGGHHHHH-HHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHH
T ss_pred ccccCCCCCCCcceEEEEEEeCcc-c---------cchHHHHH-HHHHHCCCCccccccccccchhhhcCCCccCChHHH
Confidence 887765 233 3345444311 0 00123344 445678999984221 11 00
Q ss_pred -CCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 497 -PGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 497 -~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
...++|||++. .+++++++++++|+++++++
T Consensus 339 ~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 339 DFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 01248999997 68899999999999988764
No 180
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=7.3e-27 Score=241.50 Aligned_cols=311 Identities=12% Similarity=0.067 Sum_probs=212.9
Q ss_pred CHHHHHHHHHHHhcCCCCCcc--ccCC--CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc-c---
Q 009517 141 SADSIERAWQILDQIPGRATG--AYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-R--- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~--~Y~~--~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~--- 212 (533)
|+.+++++.+++....+.... .|.. .....++++++++++ | .++++|++|+|+++++..+++.++ .
T Consensus 41 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~al~~al~~~~~~~~~ 114 (416)
T 1qz9_A 41 PVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVVTDTTSINLFKVLSAALRVQAT 114 (416)
T ss_dssp BTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEEeCChhHHHHHHHHhhcccccc
Confidence 678889998888752110010 1111 233456666666664 4 457899999999999998888764 1
Q ss_pred -CCCCeEE-EcCCcCcchHHHH----HHh--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 213 -SENDGIL-CPIPQYPLYSASI----ALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 213 -~~gd~Vl-v~~p~~~~~~~~~----~~~--g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
.+||+|+ ++.++|+.+...+ +.. |++++.+++ +++|+++|++ ++++|++++|+||||
T Consensus 115 ~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~------~~~~v~~~~~~nptG 179 (416)
T 1qz9_A 115 RSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQ------DTAVVMLTHVNYKTG 179 (416)
T ss_dssp HSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCST------TEEEEEEESBCTTTC
T ss_pred cCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCC------CceEEEEeccccCcc
Confidence 4788755 4456777655433 223 999988875 5778888765 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEE
Q 009517 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYM 363 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v 363 (533)
.+++ +++|+++|++||+++|+||+|.. +..+ .++.. + ..+ +++.|++|++. +|.++ ||+
T Consensus 180 ~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~-~~~~~----~---~~d---~~~~s~~K~l~--~g~~~~g~l 239 (416)
T 1qz9_A 180 YMHD---MQALTALSHECGALAIWDLAHSA----GAVP-VDLHQ----A---GAD---YAIGCTYKYLN--GGPGSQAFV 239 (416)
T ss_dssp BBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSC-CCHHH----H---TCS---EEEECSSSTTC--CCTTCCCEE
T ss_pred cccC---HHHHHHHHHHcCCEEEEEccccc----cCcC-CChhh----c---CCC---EEEecCcccCC--CCCCCeEEE
Confidence 9998 89999999999999999999973 2211 22222 2 234 77899999873 57887 999
Q ss_pred EEecCCHHHHHHHHHhh-----------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHH
Q 009517 364 EVTGFSAEVREQIYKVA-----------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (533)
Q Consensus 364 ~~~~~~~~~~~~l~~~~-----------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 419 (533)
++ ++++++.+.... . ..++++..++.++.++|+... .+.+++++
T Consensus 240 ~~---~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~---------~~~~~~~~ 307 (416)
T 1qz9_A 240 WV---SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA---------QTDMASLR 307 (416)
T ss_dssp EE---CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT---------TSCHHHHH
T ss_pred EE---CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHH---------hcCHHHHH
Confidence 98 777765554321 1 123456666666666553100 02346678
Q ss_pred HHHHHHHHHHHHHHhcC-C--CceEecCC----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC
Q 009517 420 SSLARRAKTLEDAFNSL-E--GITCNKAE----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG 492 (533)
Q Consensus 420 ~~~~~~~~~l~~~L~~~-~--g~~~~~~~----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 492 (533)
++++++++++.+.|+++ | |+.+..+. .+.++|+.++ . ...+. +.|.++||.+.+
T Consensus 308 ~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~-------------~~~l~-~~l~~~gi~~~~--- 368 (416)
T 1qz9_A 308 RKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP--E-------------GYAVI-QALIDRGVIGDY--- 368 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT--T-------------HHHHH-HHHHTTTEECEE---
T ss_pred HHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC--C-------------HHHHH-HHHHhCCcEecc---
Confidence 88889999999999885 6 88887764 2345665443 1 23334 445678998753
Q ss_pred CCCCCCCceEEEEec---CCcCcHHHHHHHHHHHHHHH
Q 009517 493 FGQVPGTWHFRCTIL---PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 493 f~~~~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+.+++||++. .+++++++++++|++++++.
T Consensus 369 ----~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 369 ----REPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp ----ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 12348999985 58999999999999998753
No 181
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.95 E-value=2.6e-27 Score=246.19 Aligned_cols=330 Identities=11% Similarity=0.047 Sum_probs=198.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-CCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~~gd~Vl 219 (533)
++++++++.+++.+.. ...| +.....+|.+.+++++ + ..++|++++|+++|++.+++.+.. ..+++|+
T Consensus 71 ~p~v~~A~~~~~~~~~---~~~~-~~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii 139 (429)
T 4e77_A 71 HPAIRQAVIEAVERGL---SFGA-PTEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEATMSAIRLARGYTGRDKII 139 (429)
T ss_dssp CHHHHHHHHHHHTTCS---CCSS-CCHHHHHHHHHHHHHS----T---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhCc---ccCC-CCHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEE
Confidence 7899999999987631 1234 3333445555555543 3 368999999999999999996541 2467899
Q ss_pred EcCCcCcchHHHHHH-hCCeE--EEEecCCCCCC------------CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC-C
Q 009517 220 CPIPQYPLYSASIAL-HGGTL--VPYYLDEATGW------------GLETSEVKKQLEAAKAKGITVRALVVINPGNP-T 283 (533)
Q Consensus 220 v~~p~~~~~~~~~~~-~g~~~--~~v~~~~~~~~------------~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP-t 283 (533)
+.+++|+++...+.. .+... ...+... ++ ..|+++|++++++. ++++++|+ ++|+|| +
T Consensus 140 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi-~ep~~~~~ 213 (429)
T 4e77_A 140 KFEGCYHGHADCLLVKAGSGALTLGQPNSP--GVPTDFAKHTLTCTYNDLASVRQAFEQY---PQEVACII-VEPVAGNM 213 (429)
T ss_dssp EETTCCCC------------------CCCT--TSCGGGGTTEEEECTTCHHHHHHHHHHS---TTTEEEEE-ECSSBCTT
T ss_pred EEcCccCCCChhhhhhcCCcccccCCCCcC--CCCCccCCceeecCCCCHHHHHHHHHhc---CCCEEEEE-ECCccCCC
Confidence 999999987653221 11111 1111110 11 11899999999852 12455555 566544 4
Q ss_pred cc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE
Q 009517 284 GQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (533)
Q Consensus 284 G~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~ 362 (533)
|. ..+++.+++|.++|++||+++|+||+|.+| +.+. ...... ..+ .+| +.||||.+ + +|+|+||
T Consensus 214 g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~--~~~~~~--~~~---~pd-----i~t~sK~~-~-~G~~~G~ 278 (429)
T 4e77_A 214 NCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL--AGAQDY--YHV---IPD-----LTCLGKII-G-GGMPVGA 278 (429)
T ss_dssp SCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT--TCHHHH--TTC---CCS-----EEEEEGGG-G-TTSCCEE
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc--chHHHh--cCC---CCC-----eeeecccc-c-CCCCeEE
Confidence 44 445667999999999999999999999998 5443 121111 112 456 45999999 5 6999999
Q ss_pred EEEecCCHHHHHHHHHh----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 009517 363 MEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN---- 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~---- 434 (533)
+++ ++++++.+... ...+++.++++++++.++|+... .+.+.++++++++++++.|.
T Consensus 279 ~~~---~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~------------~~~~~~~~~~~~~~l~~~L~~~~~ 343 (429)
T 4e77_A 279 FGG---RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEIS------------QVGVYETLTELTDSLATGLRHAAK 343 (429)
T ss_dssp EEE---CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHT------------STTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE---CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHH------------hcCHHHHHHHHHHHHHHHHHHHHH
Confidence 998 99998887653 33567899999999888874211 02233334444444444443
Q ss_pred cCCCceEecCCceeEEecccCCCH--HHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCc
Q 009517 435 SLEGITCNKAEGAMYLFPRIQLPE--KAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDK 512 (533)
Q Consensus 435 ~~~g~~~~~~~gg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~ 512 (533)
+.+....+++.| +++|+.+.... .........+......++.. |.++||.+.|+.. ..+|+++..++++
T Consensus 344 ~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~v~~~~~-------~~~~~~~~~t~e~ 414 (429)
T 4e77_A 344 EENIPLVVNHVG-GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHL-MLEEGVYLAPSAF-------EAGFMSLAHSNED 414 (429)
T ss_dssp HTTCCCEEEEET-TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHH-HHHTTEECCSSTT-------SCEECCTTCCHHH
T ss_pred hCCCceEEEEee-eEEEEEEccCcccccccccccccHHHHHHHHHH-HHHCCeEEeecCC-------CCEEEeccCCHHH
Confidence 333333344444 45565443210 00000000000011344444 4567999998632 1567777799999
Q ss_pred HHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKN 526 (533)
Q Consensus 513 i~~~~~~l~~~l~~ 526 (533)
+++++++|++++++
T Consensus 415 i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 415 IQKTVNAARRCFAK 428 (429)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 182
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.95 E-value=1.4e-26 Score=239.41 Aligned_cols=325 Identities=14% Similarity=0.088 Sum_probs=208.3
Q ss_pred CHHHHHHHHHHHhcCCC---CCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCe
Q 009517 141 SADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~ 217 (533)
|+.+++++.+++.+... .....|........+.+.+.+++.+.+| .++++|++++| ++++..+++.++ ++||+
T Consensus 43 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~-~~gd~ 118 (420)
T 3gbx_A 43 SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALL-QPGDT 118 (420)
T ss_dssp CHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHC-CTTCE
T ss_pred CHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhc-CCCCE
Confidence 78999999888754210 0011233333334455544456655556 45666766666 789999999998 89999
Q ss_pred EEEcCCcCcchH---HHHHH--hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 218 ILCPIPQYPLYS---ASIAL--HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 218 Vlv~~p~~~~~~---~~~~~--~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
|+++.|+|..+. ..... .+...+.++.+ .++.+|+++|++++++. ++++|++++|+||+ ..+ +
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~--~~~---l 186 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH-----KPKMIIGGFSAYSG--VVD---W 186 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH-----CCSEEEECCTTCCS--CCC---H
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc-----CCeEEEEecCccCC--ccC---H
Confidence 999999998743 22222 33455666665 45689999999999874 68999999999975 455 8
Q ss_pred HHHHHHHHHcCCEEEEccccc-cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH-
Q 009517 293 RAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA- 370 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~- 370 (533)
++|+++|++||+++|+||+|. ++.+.+. .... .. ..| |++.|+||+++ |.+.||+++ ++
T Consensus 187 ~~l~~l~~~~~~~li~De~~~~~~~~~~~--~~~~---~~-----~~d---i~~~s~sK~~~---g~~gg~~~~---~~~ 247 (420)
T 3gbx_A 187 AKMREIADSIGAYLFVDMAHVAGLIAAGV--YPNP---VP-----HAH---VVTTTTHKTLA---GPRGGLILA---KGG 247 (420)
T ss_dssp HHHHHHHHHTTCEEEEECTTTHHHHHTTS--SCCS---TT-----TSS---EEEEESSGGGC---SCSCEEEEE---SSC
T ss_pred HHHHHHHHHcCCEEEEECCcchhceeccc--CCcc---cc-----cCC---EEEeecccCCC---CCCceEEEE---cCC
Confidence 999999999999999999975 3333321 1110 00 133 78999999983 666799998 65
Q ss_pred --HHHHHHHHhhh-c-cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC-C
Q 009517 371 --EVREQIYKVAS-V-NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA-E 445 (533)
Q Consensus 371 --~~~~~l~~~~~-~-~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~ 445 (533)
++++.+..... . ..+++...+.++..++... ..+++++++++++++++++.+.|.+. |+.++.+ .
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 317 (420)
T 3gbx_A 248 DEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEA---------MEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGT 317 (420)
T ss_dssp CHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHT---------TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSC
T ss_pred cHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHH---------HhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCC
Confidence 77777765443 2 2233444444433333110 11345677888899999999999886 8888764 4
Q ss_pred ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc-------CCCCCCCCCCceEEEEec------CCcCc
Q 009517 446 GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP-------GSGFGQVPGTWHFRCTIL------PQEDK 512 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p-------g~~f~~~~g~~~iRis~~------~~~e~ 512 (533)
.+.++|+.+..+ +. +...+.++|+++||.+.| |..|+ ...+||++. .++++
T Consensus 318 ~~~~~~~~~~~~----------~~--~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~----~~~iRi~~~~~~~~~~~~~~ 381 (420)
T 3gbx_A 318 ENHLFLLDLVDK----------NL--TGKEADAALGRANITVNKNSVPNDPKSPFV----TSGIRIGSPAVTRRGFKEAE 381 (420)
T ss_dssp SSSEEEEECGGG----------TC--CHHHHHHHHHHTTEECEEECCTTCSSCTTT----CSEEEEECHHHHHTTCCHHH
T ss_pred CCeEEEEEcCCC----------CC--CHHHHHHHHHHCCcEeccccCCCCccccCC----CcceEEecchhcccCCCHHH
Confidence 566677554311 01 223345667889999999 33333 225999994 34688
Q ss_pred HHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKN 526 (533)
Q Consensus 513 i~~~~~~l~~~l~~ 526 (533)
+++++++|++++++
T Consensus 382 i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 382 VKELAGWMCDVLDN 395 (420)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999888754
No 183
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.95 E-value=2e-27 Score=241.14 Aligned_cols=314 Identities=15% Similarity=0.132 Sum_probs=216.1
Q ss_pred CHHHHHHHHHHHhcCCCC--C---ccccCCCcccHHHHHHHHHHHHhhcCCCCCCC-C-EEEcCChHHHHHHHHHHhccC
Q 009517 141 SADSIERAWQILDQIPGR--A---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-D-IFLTDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~--~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~-i~~t~G~~~al~~~~~~l~~~ 213 (533)
|+.+++++.+.+.+..+. . ...|. .+..++++++++.+.+.+|. +++ + +++|+|+++++..++..++ +
T Consensus 16 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~t~g~t~a~~~~~~~l~-~ 90 (362)
T 2c0r_A 16 PLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFIQGGASTQFAMIPMNFL-K 90 (362)
T ss_dssp CHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEESSHHHHHHHHHHHHHC-C
T ss_pred CHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEECCCchHHHHHHHHhcC-C
Confidence 899999998877542110 0 11121 23456777888888777774 443 5 5778999999999999998 8
Q ss_pred CCCeEEEcCCcCcch--HHHHHHhCCeEEEEecCCCCCCC--CCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH
Q 009517 214 ENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWG--LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~~~~~~~~--ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~ 289 (533)
+||+|+++++.+..+ ...++..| +++.++++.+.+++ +|.++++ +++ ++++|++++|+||||.+++
T Consensus 91 ~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~- 160 (362)
T 2c0r_A 91 EGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFK- 160 (362)
T ss_dssp TTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECS-
T ss_pred CCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceecc-
Confidence 999999887664442 45677789 99999987322233 4666554 443 7999999999999999754
Q ss_pred HHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 290 ~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
++++| +|+++|+|++|..+.. + .++ .+ -| +++.|+||++ |++| +||+++ +
T Consensus 161 -~l~~i------~~~~vivD~a~~~~~~----~-~~~----~~-----~d---~~~~s~~K~~-g~~G--~G~l~~---~ 210 (362)
T 2c0r_A 161 -AFPDT------GSVPLIGDMSSDILSR----P-FDL----NQ-----FG---LVYAGAQKNL-GPSG--VTVVIV---R 210 (362)
T ss_dssp -SCCCC------TTSCEEEECTTTTTSS----C-CCG----GG-----CS---EEEEETTTTT-CCSS--CEEEEE---E
T ss_pred -ccccc------CCCEEEEEChhhccCC----c-cch----hH-----Cc---EEEEeccccc-cCcC--cEEEEE---c
Confidence 25555 8999999999986321 1 111 11 13 6688999999 7888 899998 7
Q ss_pred HHHHHHHHHh------------h-hccccCChHHHHHHHHHcCCCCCCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Q 009517 370 AEVREQIYKV------------A-SVNLCSNISGQILASLVMSPPKVGDESYESYCA--ERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 370 ~~~~~~l~~~------------~-~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++++.+.+. . ...++++...+.++..+|+. ..+ .++.++++++++++++.+.|+
T Consensus 211 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~----------~~~~~~~~~~~~~~~~~~~~l~~~L~ 280 (362)
T 2c0r_A 211 EDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKW----------IEERGGLEGVQQANRKKASLIYDAID 280 (362)
T ss_dssp GGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH----------HHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHH----------HHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 7776554321 1 13356788888888877731 122 357788899999999999999
Q ss_pred cCCCc-eEecC---CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--C
Q 009517 435 SLEGI-TCNKA---EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--P 508 (533)
Q Consensus 435 ~~~g~-~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~ 508 (533)
+++++ .+..+ .++.++++.++ .+. +...++ +.|.++||.+.||..|. + +||||++ .
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~~-~~L~~~gi~~~~g~~~~---~--~iRis~~~~~ 342 (362)
T 2c0r_A 281 QSGGFYRGCVDVDSRSDMNITFRLA--SEE----------LEKEFV-KASEQEGFVGLKGHRSV---G--GLRASIYNAV 342 (362)
T ss_dssp TSTTSSEESSCGGGBCSSEEEEECS--CHH----------HHHHHH-HHHHHTTEESCBCCTTT---C--SEEEECCTTS
T ss_pred HcCCccccCCChHHcCCcEEEEEcC--Ccc----------hHHHHH-HHHHHCCCeeccCCCCC---C--EEEEECCCCC
Confidence 98436 66421 23345564443 211 123444 44677899999887662 2 7999997 5
Q ss_pred CcCcHHHHHHHHHHHHHHH
Q 009517 509 QEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 509 ~~e~i~~~~~~l~~~l~~~ 527 (533)
++++++++++.|+++++++
T Consensus 343 ~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 343 PYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 7889999999998877643
No 184
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=4.1e-26 Score=238.31 Aligned_cols=326 Identities=13% Similarity=0.043 Sum_probs=218.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCC---cccHHHH--HHHH-HHHHhhcCCCCCCCCEEE-cCChHHHHHHHHHHhccC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHS---QGIKGLR--DTIA-AGIEARDGFPADPNDIFL-TDGASPAVHMMMQLLIRS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~---~G~~~lr--~aia-~~~~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~~ 213 (533)
|+.+++++.+.+.+.. ..+|+.. .|...++ ++++ +++.+.+|.+ .+.+ ++|+++|+..++++++ +
T Consensus 58 ~~~v~~a~~~~~~~~~---~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~----~~~v~~~sGs~a~~~a~~~~~-~ 129 (447)
T 3h7f_A 58 PRAVLQAQGSVLTNKY---AEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHALM-S 129 (447)
T ss_dssp CHHHHHHHTSGGGGCC---CCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS----EEECCCSSHHHHHHHHHHHHC-C
T ss_pred CHHHHHHHHHHhcCCc---cccCCcccccCccHHHHHHHHHHHHHHHHHcCCC----ceEEEeCCHHHHHHHHHHHhc-C
Confidence 7899999888775421 2234332 2444444 5555 6666666632 2444 7788899999999998 8
Q ss_pred CCCeEEEcCCcCcchH-H----HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 214 ENDGILCPIPQYPLYS-A----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~-~----~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
+||+|++++|+|..+. . .+...+..+++++++++ ++.+|+++|+++++.. ++++|++++|+||++.
T Consensus 130 ~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~-----~~~~i~~~~~~~~~~~--- 200 (447)
T 3h7f_A 130 PGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THLIDMDAVRATALEF-----RPKVIIAGWSAYPRVL--- 200 (447)
T ss_dssp TTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCSCCHHHHHHHHHHH-----CCSEEEEECSSCCSCC---
T ss_pred CCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCCcCHHHHHHHHHhc-----CCeEEEEcCCCCCCcc---
Confidence 9999999999997731 1 12224566777777644 5689999999999764 6889999899999987
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEec
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~ 367 (533)
++++|+++|++||+++|+||+| .++.+.+. ..+.. . ..| |++.|+||++ + |+|+||+++
T Consensus 201 --~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~--~~~~~---~-----~~d---i~~~s~sK~l-~--G~~gG~i~~-- 260 (447)
T 3h7f_A 201 --DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL--HPSPV---P-----HAD---VVSTTVHKTL-G--GGRSGLIVG-- 260 (447)
T ss_dssp --CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCST---T-----TCS---EEEEESSGGG-C--CCSCEEEEE--
T ss_pred --CHHHHHHHHHHcCCEEEEECCchhhhhcCCC--CCCCC---C-----CCc---EEEecCCcCC-C--CCCeEEEEE--
Confidence 3899999999999999999996 55555442 11110 1 123 6799999987 4 899999998
Q ss_pred CCHHHHHHHHHhhh-cc-ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCceE
Q 009517 368 FSAEVREQIYKVAS-VN-LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL----EGITC 441 (533)
Q Consensus 368 ~~~~~~~~l~~~~~-~~-~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~ 441 (533)
++++++.+.+... .+ .+++...+.++..++... ..++++...+++.++++++.+.|.+. +|+.+
T Consensus 261 -~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~ 330 (447)
T 3h7f_A 261 -KQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIA---------ATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSV 330 (447)
T ss_dssp -CGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHT---------TSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEE
T ss_pred -CHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHh---------hCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEE
Confidence 8888888876543 22 233333344443333210 01245667778888888999998875 57887
Q ss_pred ec-CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEE----cCCCCCCCCCCceEEEEec------CCc
Q 009517 442 NK-AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLV----PGSGFGQVPGTWHFRCTIL------PQE 510 (533)
Q Consensus 442 ~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~g~~~iRis~~------~~~ 510 (533)
+. +.++.++|+++... +. +...+.++|+++||.+. |+..+. +...+++||++. .++
T Consensus 331 ~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~l~~~GI~v~~~~i~~~~~~-p~~~~~lRig~~~~~~~~~~~ 397 (447)
T 3h7f_A 331 VSGGTDVHLVLVDLRDS----------PL--DGQAAEDLLHEVGITVNRNAVPNDPRP-PMVTSGLRIGTPALATRGFGD 397 (447)
T ss_dssp GGGSCSSSEEEEECTTS----------SC--CHHHHHHHHHHTTEECBC--------------CEEEEECHHHHHHTCCH
T ss_pred ecCCCCCCEEEEEcCCC----------CC--CHHHHHHHHHHCCeEEecccCCCCCCC-CCCCCceeccCHHHhhCCCCH
Confidence 65 34566777665421 11 23335577888899998 653222 122337999983 568
Q ss_pred CcHHHHHHHHHHHHHH
Q 009517 511 DKIPAIVTRLTDFHKN 526 (533)
Q Consensus 511 e~i~~~~~~l~~~l~~ 526 (533)
+++++++++|++++++
T Consensus 398 eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 398 TEFTEVADIIATALAT 413 (447)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8999999999988764
No 185
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=1.9e-26 Score=237.24 Aligned_cols=286 Identities=13% Similarity=0.118 Sum_probs=198.3
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVP 241 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~ 241 (533)
..+..+|+++++++++. . +.|++++| ++|+..+++ ++ ++||+|+++.|+|++....+ +..|.+++.
T Consensus 66 ~p~~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 135 (403)
T 3cog_A 66 NPTRNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LL-KAGDQIICMDDVYGGTNRYFRQVASEFGLKISF 135 (403)
T ss_dssp CHHHHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TS-CTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEE
T ss_pred CchHHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-Hh-CCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEE
Confidence 34578999999999852 2 55666665 599999999 77 79999999999999755443 467999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEccccccccccCC
Q 009517 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG-LVLLADEVYQENVYVPE 320 (533)
Q Consensus 242 v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~-~~lI~De~y~~~~~~~~ 320 (533)
++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|+++| +++|+||+|..+.+.
T Consensus 136 v~~~-------d~~~l~~~i~~------~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~-- 197 (403)
T 3cog_A 136 VDCS-------KIKLLEAAITP------ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ-- 197 (403)
T ss_dssp ECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC--
T ss_pred ECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC--
Confidence 8864 78999999876 7999999999999999998 999999999999 999999999986542
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHc
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVM 398 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L 398 (533)
.+. ++ ..+ |++.|+||.++ .+| .|+||+++ .++++++.+..... .+.+.+++.+.++...|
T Consensus 198 ~~~--------~~---~~d---iv~~S~sK~~~-g~~~~~~G~v~~--~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l 260 (403)
T 3cog_A 198 RPL--------AL---GAD---ISMYSATKYMN-GHSDVVMGLVSV--NCESLHNRLRFLQNSLGAVPSPIDCYLCNRGL 260 (403)
T ss_dssp CTT--------TT---TCS---EEEEETTTTTT-CSSCCCCEEEEE--CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred Ccc--------cc---CCe---EEEEcChhhcc-CCCCCeEEEEEE--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 111 11 233 88999999994 455 58999987 24788888876654 44567888888887777
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH--------------HhcCCCceEecCC----ceeEEecccCCCHHH
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDA--------------FNSLEGITCNKAE----GAMYLFPRIQLPEKA 460 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------L~~~~g~~~~~~~----gg~~~~~~~~~~~~~ 460 (533)
+.. ....++..++...+.+. |.++|++.+..++ |+++.|. ++..
T Consensus 261 ~~l--------------~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~-l~~~--- 322 (403)
T 3cog_A 261 KTL--------------HVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFY-IKGT--- 322 (403)
T ss_dssp TTH--------------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEE-ESSC---
T ss_pred hHH--------------HHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEE-ecCC---
Confidence 521 11122222333333333 3334555555443 8888773 4311
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEc---C----------CCCCC----------CCCCceEEEEecCCcCcHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVP---G----------SGFGQ----------VPGTWHFRCTILPQEDKIPAIV 517 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~p---g----------~~f~~----------~~g~~~iRis~~~~~e~i~~~~ 517 (533)
. ..+.+++++.||.+.. | ..+.. .-..++||||++. ++.++.+
T Consensus 323 -----------~-~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i 388 (403)
T 3cog_A 323 -----------L-QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLL 388 (403)
T ss_dssp -----------H-HHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHH
T ss_pred -----------H-HHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHH
Confidence 1 1234566777875432 2 21110 0114599999986 4567778
Q ss_pred HHHHHHHHHHH
Q 009517 518 TRLTDFHKNFM 528 (533)
Q Consensus 518 ~~l~~~l~~~~ 528 (533)
+.|.+++++..
T Consensus 389 ~~l~~al~~~~ 399 (403)
T 3cog_A 389 EDLDQALKAAH 399 (403)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 88888877654
No 186
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.95 E-value=3.9e-27 Score=240.10 Aligned_cols=316 Identities=14% Similarity=0.125 Sum_probs=218.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
++++++++.+.+.. ..|.+..+..+||++++++++ .+++++++|+++|+..+++.+ . ++||+|+
T Consensus 16 ~~~~~~a~~~~~~~------~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~-~~gd~Vi 80 (373)
T 3frk_A 16 EYEIKFKFEEIYKR------NWFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDI-GFGDEVI 80 (373)
T ss_dssp HHHHHHHHHHHHHH------TCCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHHC------CCccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCC-CCcCEEE
Confidence 56778888777765 236777789999999999985 248999999999999999999 7 7999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|+.+...+...|++++.++.+++ ++.+|++++++++++ ++++|+ |+||||.+.+ +++|.++|
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~------~~~~v~---~~n~~G~~~~---l~~i~~l~ 147 (373)
T 3frk_A 81 VPSNTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITE------KTKAII---AVHLYGQPAD---MDEIKRIA 147 (373)
T ss_dssp EETTSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCT------TEEEEE---EECCTTCCCC---HHHHHHHH
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCC------CCeEEE---EECCCcCccc---HHHHHHHH
Confidence 9999999999999999999999998854 678999999999876 788887 7789999887 88999999
Q ss_pred HHcCCEEEEcccccccc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecCC--ccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 300 KKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 300 ~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
+++|+++|+|++|..+. +++. ... . ..| +++.||+ |.+ +.+| +.|++++ .++++++.+
T Consensus 148 ~~~~~~li~D~a~~~g~~~~~~-~~~-------~----~~d---~~~~S~~~~K~l-~~~g-~gg~~~~--~~~~~~~~~ 208 (373)
T 3frk_A 148 KKYNLKLIEDAAQAHGSLYKGM-KVG-------S----LGD---AAGFSFYPAKNL-GSLG-DGGAVVT--NDKDLAEKI 208 (373)
T ss_dssp HHHTCEEEEECTTCTTCEETTE-ETT-------S----SSS---EEEEECCTTSSS-CCSS-SCEEEEE--SCHHHHHHH
T ss_pred HHcCCEEEEECCcccCCEECCE-ecc-------c----ccc---EEEEeCcCCCcc-Cccc-eeEEEEe--CCHHHHHHH
Confidence 99999999999998532 3221 100 0 134 6688877 987 4224 4888887 356787777
Q ss_pred HHhhhc-------------cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec
Q 009517 377 YKVASV-------------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK 443 (533)
Q Consensus 377 ~~~~~~-------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 443 (533)
...... .+..+.+.++++...+ +.++...++.++..+++.+.|.+++ +.+..
T Consensus 209 ~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 273 (373)
T 3frk_A 209 KALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL--------------KYLDKWNEERRKIAQKYIAGINNPN-VIIPV 273 (373)
T ss_dssp HHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH--------------HTHHHHHHHHHHHHHHHHHHCCCTT-EECCC
T ss_pred HHHHhcCcccCCccccccccCCCCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhccCc-eEecc
Confidence 665431 1122444444333322 2334556666777788888888874 55432
Q ss_pred -CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC-----------CC---------CCceE
Q 009517 444 -AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ-----------VP---------GTWHF 502 (533)
Q Consensus 444 -~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----------~~---------g~~~i 502 (533)
+.+....|..+.+.. .+...+ .+.|.++||.+.++..... .. ..+.+
T Consensus 274 ~~~~~~~~~~~~~~~~-----------~~~~~l-~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 341 (373)
T 3frk_A 274 EADYAKHVWYTFVIRS-----------EKRDEL-QKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEIL 341 (373)
T ss_dssp CCTTEECCCSSEEEEE-----------SSHHHH-HHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEE
T ss_pred CCCCCceeeEEEEEEe-----------CCHHHH-HHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEE
Confidence 222322222121110 112333 3556678999997652110 00 01479
Q ss_pred EEEec--CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 503 RCTIL--PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 503 Ris~~--~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
||++. .++++|+++++.|+++..+...+
T Consensus 342 rl~~~~~~t~~di~~~~~~l~~~~~~~~~~ 371 (373)
T 3frk_A 342 SIPIWYGMKNEEIEYVIDKINAWKLEHHHH 371 (373)
T ss_dssp EECCCTTCCHHHHHHHHHHHHTCC------
T ss_pred EccCCCCCCHHHHHHHHHHHHHHhhhhccc
Confidence 99995 89999999999998877665443
No 187
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.95 E-value=7.6e-26 Score=236.67 Aligned_cols=336 Identities=11% Similarity=-0.039 Sum_probs=230.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC---CCEEEcCChHHHHHHHHHHhccC----
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP---NDIFLTDGASPAVHMMMQLLIRS---- 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~~~l~~~---- 213 (533)
++.+.+++.+.+.. ....|....|..++++++++++.+.+|.+.+. ..+++|+|+++|+..++.+++ +
T Consensus 55 ~~~v~e~~~~a~~~----~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~-~~~~~ 129 (452)
T 2dgk_A 55 DENVHKLMDLSINK----NWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMK-WRWRK 129 (452)
T ss_dssp CHHHHHHHHHTTTC----BTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHH-HHHHH
T ss_pred hHHHHHHHHHHhcc----CCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHH-HHHHH
Confidence 56777777777654 23456666788899999999999888854322 149999999999999998875 3
Q ss_pred ----CC-----CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 214 ----EN-----DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 214 ----~g-----d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
+| ++|++++ +|..+...+...|++++.+++++ ++|.+|+++|+++|++ ++++|++++|+||||
T Consensus 130 ~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG 201 (452)
T 2dgk_A 130 RMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDE------NTIGVVPTFGVTYTG 201 (452)
T ss_dssp HHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCT------TEEEEECBBSCTTTC
T ss_pred HHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhh------CCEEEEEEcCCcCCc
Confidence 44 5899999 99999999999999999999875 3679999999999976 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHc------CCEEEEccccccccc---cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCC
Q 009517 285 QVLAEENQRAIVDFCKKE------GLVLLADEVYQENVY---VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~------~~~lI~De~y~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl 355 (533)
.+.+ +++|+++|+++ |+++++|++|.++.. .+..+ ..+ . .++. .++..+++|. ++
T Consensus 202 ~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-----~----~~~~-d~~~~~~hK~--~~ 265 (452)
T 2dgk_A 202 NYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV-WDF-----R----LPRV-KSISASGHKF--GL 265 (452)
T ss_dssp BBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-CST-----T----STTE-EEEEEETTTT--TC
T ss_pred ccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch-hhc-----C----CCCC-cEEEECcccc--cC
Confidence 9987 88999999995 999999999998653 22101 110 0 1232 3456788994 45
Q ss_pred CCCeeEEEEEecCCHHHH-HHHHHhhh-c-----c----ccC---ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHH
Q 009517 356 CGKRGGYMEVTGFSAEVR-EQIYKVAS-V-----N----LCS---NISGQILASLVMSPPKVGDESYESYCAERDGILSS 421 (533)
Q Consensus 356 ~G~riG~v~~~~~~~~~~-~~l~~~~~-~-----~----~~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 421 (533)
+|+++||+++ .+++++ +.+..... . . .+. ..+.+.++...+. .+.++++.++
T Consensus 266 ~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg------------~~g~~~~~~~ 331 (452)
T 2dgk_A 266 APLGCGWVIW--RDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG------------REGYTKVQNA 331 (452)
T ss_dssp CCSSCEEEEE--SSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH------------HHHHHHHHHH
T ss_pred CCCCeEEEEE--cCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh------------HHHHHHHHHH
Confidence 7899999998 233332 33211000 0 0 011 2333444433331 2345677888
Q ss_pred HHHHHHHHHHHHhcCCCceEecC-----CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 422 LARRAKTLEDAFNSLEGITCNKA-----EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 422 ~~~~~~~l~~~L~~~~g~~~~~~-----~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
+.++++++.+.|++++++.++.+ ..++++| .++.... ... +...+. +.|.++||.+..+......
T Consensus 332 ~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f-~~~~~~~-------~~~-~~~~l~-~~L~~~Gi~v~~~~~~~~~ 401 (452)
T 2dgk_A 332 SYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCF-KLKDGED-------PGY-TLYDLS-ERLRLRGWQVPAFTLGGEA 401 (452)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEE-EECTTCC-------CSC-CHHHHH-HHHHHTTCBCCEEECSTTC
T ss_pred HHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEE-EecCccc-------ccC-CHHHHH-HHHHhcCCeeeeeeCCccc
Confidence 89999999999999977888753 4455443 3331000 000 113334 4455679865432111111
Q ss_pred CCCceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 497 ~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.+..++||+++ .++++++++++.|+++++.+.+
T Consensus 402 ~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 402 TDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23458999996 6788999999999999887754
No 188
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.95 E-value=5e-25 Score=228.47 Aligned_cols=285 Identities=13% Similarity=0.095 Sum_probs=201.1
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEEEEe
Q 009517 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYY 243 (533)
Q Consensus 168 G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~v~ 243 (533)
...+|+++++++++ .+ +.|++++| ++|+..+++.++ ++||+|+++.|.|+++... +...|.+++.++
T Consensus 115 ~~~~l~~~lA~l~g------~~-~~v~~~sG-~~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 185 (445)
T 1qgn_A 115 TTVVLEEKISALEG------AE-STLLMASG-MCASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETILPKMGITATVID 185 (445)
T ss_dssp HHHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHHHHS-CSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 35688999988874 22 44555555 599999999888 7999999999999987664 445799999887
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCe-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCC
Q 009517 244 LDEATGWGLETSEVKKQLEAAKAKGITV-RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 244 ~~~~~~~~ld~~~l~~~i~~~~~~g~~~-~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~ 322 (533)
.+ |+++++++|++ ++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .+
T Consensus 186 ~~-------d~~~l~~ai~~------~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~--~~ 247 (445)
T 1qgn_A 186 PA-------DVGALELALNQ------KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ--KA 247 (445)
T ss_dssp SS-------CHHHHHHHHHH------SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC--CT
T ss_pred CC-------CHHHHHHHhcc------CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC--Cc
Confidence 53 79999999987 78 99999999999999998 889999999999999999999764321 11
Q ss_pred cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCC
Q 009517 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~ 400 (533)
.++ ..| +++.|+||.+ |..| .++||+++ ++++++.+..... .....+++.++++...++
T Consensus 248 --------~~~---g~D---iv~~S~sK~~-gg~gd~~~G~l~~---~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~- 308 (445)
T 1qgn_A 248 --------LAL---GAD---LVLHSATKFL-GGHNDVLAGCISG---PLKLVSEIRNLHHILGGALNPNAAYLIIRGMK- 308 (445)
T ss_dssp --------TTT---TCS---EEEECTTTTT-TCSSSCCCEEEEE---CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG-
T ss_pred --------ccc---CCE---EEEECCcccc-cccccceEEEEEE---CHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH-
Confidence 011 234 7899999998 5344 57999998 8899888876554 333456666665555552
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eEecC-----------------CceeEEecccCCCHHHHH
Q 009517 401 PKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI-TCNKA-----------------EGAMYLFPRIQLPEKAIK 462 (533)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~-----------------~gg~~~~~~~~~~~~~~~ 462 (533)
.+....++..++++.+.+.|++.|++ .+..| .|++ +++.++....
T Consensus 309 -------------~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~i-vsf~l~~~~~--- 371 (445)
T 1qgn_A 309 -------------TLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGA-VSFEVDGDLL--- 371 (445)
T ss_dssp -------------GHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSE-EEEEESSCHH---
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcE-EEEEECCCHH---
Confidence 22333455566688899999988777 34333 3444 3434431100
Q ss_pred HHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--------------------CCCCceEEEEecCCcCcHHHHHHHHHH
Q 009517 463 AAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--------------------VPGTWHFRCTILPQEDKIPAIVTRLTD 522 (533)
Q Consensus 463 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--------------------~~g~~~iRis~~~~~e~i~~~~~~l~~ 522 (533)
....++ ..|+..++.+..|..+.. .-..+.||||++ .|+++.+++.|++
T Consensus 372 --------~~~~~l-~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--~Edid~li~~L~~ 440 (445)
T 1qgn_A 372 --------TTAKFV-DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--VEDFDDLKADILQ 440 (445)
T ss_dssp --------HHHHHH-HHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--SSCHHHHHHHHHH
T ss_pred --------HHHHHH-HhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--cCCHHHHHHHHHH
Confidence 012222 233334787777765421 011359999998 4679999999999
Q ss_pred HHHH
Q 009517 523 FHKN 526 (533)
Q Consensus 523 ~l~~ 526 (533)
+++.
T Consensus 441 al~~ 444 (445)
T 1qgn_A 441 ALDS 444 (445)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8864
No 189
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=6.6e-27 Score=234.32 Aligned_cols=183 Identities=15% Similarity=0.134 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEEEecCC
Q 009517 171 GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYLDE 246 (533)
Q Consensus 171 ~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~~~ 246 (533)
+|+++++++++ .+ +.|+ +++|++|+..+++.+. .+||+|+++.|+|+.+...+ ...|.+++.++.
T Consensus 2 ~l~~~la~~~g------~~-~~i~-~~sG~~a~~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE-ACAA-TASGMGAIAASVWTFL-KAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-- 70 (331)
T ss_dssp HHHHHHHHHHT------CS-EEEE-ESSHHHHHHHHHHHHC-CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT--
T ss_pred hHHHHHHHHhC------CC-eEEE-eCChHHHHHHHHHHhc-CCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC--
Confidence 68899999875 22 4454 4555899999999887 79999999999999987765 457999988875
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEccccccccccCCCCccc
Q 009517 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADEVYQENVYVPEKKFHS 325 (533)
Q Consensus 247 ~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~-~~~~lI~De~y~~~~~~~~~~~~~ 325 (533)
.|++++++++++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+||+|..+.+.. +
T Consensus 71 -----~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~-----~ 131 (331)
T 1pff_A 71 -----AVPGNIEKHLKP------NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN-----P 131 (331)
T ss_dssp -----TSTTHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC-----G
T ss_pred -----CCHHHHHHhhcC------CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC-----h
Confidence 378889888875 7999999999999999998 9999999999 999999999998654421 1
Q ss_pred HHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe-eEEEEEecCCH-HHHHHHHHhhhc--cccCChHHHHHHHHHc
Q 009517 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSA-EVREQIYKVASV--NLCSNISGQILASLVM 398 (533)
Q Consensus 326 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r-iG~v~~~~~~~-~~~~~l~~~~~~--~~~~~~~~q~a~~~~L 398 (533)
+ +. ..+ +++.|+||.+ +.+|.| +||+++ ++ ++++.+...... +.+.+++.++++...+
T Consensus 132 ~-----~~---~~d---~~~~s~~K~~-~~~~~r~~G~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 193 (331)
T 1pff_A 132 L-----DL---GVD---IVVHSATKYI-NGHTDVVAGLVCS---RADIIAKVKSQGIKDITGAIISPHDAWLITRGT 193 (331)
T ss_dssp G-----GG---TCS---EEEEETTTTT-SSSSSCCCEEEEE---CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHH
T ss_pred h-----hc---CCc---EEEEECcccc-CCCCCceEEEEEe---CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCc
Confidence 1 11 233 8899999999 678999 899998 77 888888776543 4567777777765555
No 190
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.95 E-value=2.3e-25 Score=228.56 Aligned_cols=286 Identities=14% Similarity=0.091 Sum_probs=209.0
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVP 241 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~ 241 (533)
.....+|+++++++++ .+++++++|+++|+..+++.++ ++||+|+++.|+|+++...+ ...|.+++.
T Consensus 65 ~~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~ 135 (392)
T 3qhx_A 65 NPTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAML-RPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTP 135 (392)
T ss_dssp CHHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEE
T ss_pred ChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEE
Confidence 3446788888888864 3478999999999999999988 79999999999999877666 567999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCC
Q 009517 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (533)
Q Consensus 242 v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~ 321 (533)
++.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..... ..
T Consensus 136 v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~~- 197 (392)
T 3qhx_A 136 VALA-------DLDAVRAAIRP------TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-QQ- 197 (392)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CC-
T ss_pred eCCC-------CHHHHHHhhCC------CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-CC-
Confidence 8864 79999999976 8999999999999999988 99999999999999999999986432 11
Q ss_pred CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcC
Q 009517 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS 399 (533)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~ 399 (533)
+ ..+ ..| +++.|+||.+ |.+| .|+||+++ .++++++.+..... .+.+.+++.+.++...++
T Consensus 198 ~--------~~~---~~d---i~~~S~sK~l-g~~g~~~~G~v~~--~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 198 P--------LSL---GAD---VVLHSTTKYI-GGHSDVVGGALVT--NDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp G--------GGG---TCS---EEEEETTTTT-TCSSCCCCEEEEE--SCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred h--------HHh---CCc---EEEEcCcccc-CCCCCceEEEEEE--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 1 011 244 7899999999 6566 79999998 23688888877665 567778888888777764
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-cC-----------------CceeEEecccCCCHHHH
Q 009517 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN-KA-----------------EGAMYLFPRIQLPEKAI 461 (533)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~-----------------~gg~~~~~~~~~~~~~~ 461 (533)
. +....++..++++.+.+.|++.|++..+ .| .|++ +++.++....
T Consensus 261 ~--------------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~-~~~~l~~~~~-- 323 (392)
T 3qhx_A 261 T--------------LVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGM-VSVRMRAGRT-- 323 (392)
T ss_dssp T--------------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE-EEEEETTCHH--
T ss_pred H--------------HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceE-EEEEeCCcHH--
Confidence 2 2333455667777888888887665433 11 1444 4444432111
Q ss_pred HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC---C--------------CCCceEEEEecCCcCcHHHHHHHHHHHH
Q 009517 462 KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ---V--------------PGTWHFRCTILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 462 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---~--------------~g~~~iRis~~~~~e~i~~~~~~l~~~l 524 (533)
....+ ...|+..++.+..|..+.. + -..+.||||++. +++++.++.|.+++
T Consensus 324 ---------~~~~~-~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~al 391 (392)
T 3qhx_A 324 ---------AAEQL-CAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQAL 391 (392)
T ss_dssp ---------HHHHH-HHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred ---------HHHHH-HHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence 11222 3445667888887776431 0 123489999984 46778888887765
No 191
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=2.2e-26 Score=241.66 Aligned_cols=292 Identities=12% Similarity=0.033 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCC---eEEEcCCcCcchHH----HHHHhCCeEE--
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND---GILCPIPQYPLYSA----SIALHGGTLV-- 240 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd---~Vlv~~p~~~~~~~----~~~~~g~~~~-- 240 (533)
.++++.++++++ .++++|++|+|+++++..+++++. ++|+ +|+++.|+|++... .++..|+++.
T Consensus 114 ~~l~~~la~~~g------~~~~~v~~t~g~t~al~~~~~~~~-~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~ 186 (465)
T 3e9k_A 114 ESIVGLMKDIVG------ANEKEIALMNALTVNLHLLMLSFF-KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEES 186 (465)
T ss_dssp HHHHGGGHHHHT------CCGGGEEECSCHHHHHHHHHHHHC-CCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHcC------CCcCCEEEECCHHHHHHHHHHHhc-cccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceee
Confidence 557777777764 567899999999999999999997 5554 59999999998444 5666888752
Q ss_pred ---EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 009517 241 ---PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 241 ---~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~ 317 (533)
.++.+ +++.+|+++|+++|+++ ++++++|++++|+||||.+++ +++|.++|++||+++|+|++++.
T Consensus 187 ~v~~~~~~--~~~~~d~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~--- 255 (465)
T 3e9k_A 187 MRMIKPRE--GEETLRIEDILEVIEKE---GDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV--- 255 (465)
T ss_dssp EEEECCCT--TCSSCCHHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT---
T ss_pred eEEEecCC--CCCccCHHHHHHHHHhc---CCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc---
Confidence 22332 35688999999999853 127999999999999999998 88999999999999999999975
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh----------------
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS---------------- 381 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~---------------- 381 (533)
+..+ ..+. ++ +.| +++.|++|.+.+-| .++|++++ ++++++.+.....
T Consensus 256 -g~~~-~~~~----~~---~~D---~~~~s~~K~l~~gp-~~~g~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 319 (465)
T 3e9k_A 256 -GNVE-LYLH----DW---GVD---FACWCSYKYLNAGA-GGIAGAFI---HEKHAHTIKPALVGWFGHELSTRFKMDNK 319 (465)
T ss_dssp -TTSC-CCHH----HH---TCC---EEEECSSSTTCCCT-TCCCEEEE---CGGGTTTSCCSSCCGGGBCHHHHTTCCSC
T ss_pred -CCcC-Cchh----hc---CCC---EEEECcccccccCC-CceEEEEE---cHHHHhhcCCcccCccCCCCCcccccCCC
Confidence 2211 2222 22 234 77899999984223 37899888 7776554432100
Q ss_pred ----------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhcC----------CCce
Q 009517 382 ----------VNLCSNISGQILASLVMSPPKVGDESYESYCAE-RDGILSSLARRAKTLEDAFNSL----------EGIT 440 (533)
Q Consensus 382 ----------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~----------~g~~ 440 (533)
...+++.++..++.++++ .+.+. +++++++++++++++.+.|+++ +|+.
T Consensus 320 ~~~~~~~~~~~~gt~~~~~~~a~~aal~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 389 (465)
T 3e9k_A 320 LQLIPGVCGFRISNPPILLVCSLHASLE----------IFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVN 389 (465)
T ss_dssp CCBCSSGGGGCCSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEE
T ss_pred cCcCCChHHhccCCccHHHHHHHHHHHH----------HHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeE
Confidence 012556666666666653 12222 6788888999999999999884 6888
Q ss_pred EecCC----ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe-c--CCcCcH
Q 009517 441 CNKAE----GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI-L--PQEDKI 513 (533)
Q Consensus 441 ~~~~~----gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~-~--~~~e~i 513 (533)
++.|. .|.++++.++.. ...+. +.|.++||.+.. . +.++||||+ . .++++|
T Consensus 390 ~~~p~~~~~~g~~~~~~~~~~--------------~~~l~-~~L~~~Gi~v~~----~---~~~~iRis~~~~~~t~edi 447 (465)
T 3e9k_A 390 IITPSHVEERGCQLTITFSVP--------------NKDVF-QELEKRGVVCDK----R---NPNGIRVAPVPLYNSFHDV 447 (465)
T ss_dssp ECSCSSGGGBCSCEEEEECCT--------------TCCHH-HHHHTTTEECEE----E---TTTEEEEBCCTTTCCHHHH
T ss_pred EeCCCCHhhcccEEEEEecCC--------------HHHHH-HHHHHCCEEEec----C---CCCEEEEeCcccCCCHHHH
Confidence 88775 244555444411 11223 455678999873 2 223999997 3 788999
Q ss_pred HHHHHHHHHHHHHH
Q 009517 514 PAIVTRLTDFHKNF 527 (533)
Q Consensus 514 ~~~~~~l~~~l~~~ 527 (533)
++++++|++++++.
T Consensus 448 ~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 448 YKFTNLLTSILDSA 461 (465)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988754
No 192
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=3.6e-25 Score=226.87 Aligned_cols=282 Identities=14% Similarity=0.161 Sum_probs=200.9
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH----HHHhCCeEEE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVP 241 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~ 241 (533)
.....+|+++++++++ . +++++++++++|+..+++.++ ++||+|+++.|+|+++... ++..|.+++.
T Consensus 58 ~~~~~~l~~~la~~~g------~--~~~i~~~sG~~ai~~~~~~~~-~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 128 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEG------A--AGSAAFGSGMGAISSSTLAFL-QKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDL 128 (389)
T ss_dssp CHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHTTTC-CTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence 4457789999999874 2 256777778899999999887 7999999999999986665 5778999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCC
Q 009517 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (533)
Q Consensus 242 v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~ 321 (533)
++. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..+.+. .
T Consensus 129 v~~-------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~--~ 190 (389)
T 3acz_A 129 IDT-------SDVEKVKAAWKP------NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL--K 190 (389)
T ss_dssp ECT-------TCHHHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC--C
T ss_pred ECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc--C
Confidence 885 379999999876 7999999999999999998 899999999999999999999876441 1
Q ss_pred CcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCH-HHHHHHHHhhh-ccccCChHHHHHHHHHc
Q 009517 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSA-EVREQIYKVAS-VNLCSNISGQILASLVM 398 (533)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~-~~~~~l~~~~~-~~~~~~~~~q~a~~~~L 398 (533)
+ + ++ ..| +++.|+||.+ +.+|.|+ ||+++ ++ ++++.+..... .+.+.++..+.++...|
T Consensus 191 ~---~-----~~---~~d---i~~~S~sK~~-~~~~~~~~G~v~~---~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l 252 (389)
T 3acz_A 191 P---L-----EL---GAD---IALHSVSKYI-NGHGDVIGGVSSA---KTAEDIATIKFYRKDAGSLMAPMDAFLCARGM 252 (389)
T ss_dssp G---G-----GT---TCS---EEEEETTTTT-TCSSCCCCEEEEE---SSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred c---c-----cc---CCe---EEEECChhhc-cCCCCceeEEEEE---CcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc
Confidence 1 1 11 234 8899999999 6789998 99998 77 88888877654 44556777777777766
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CceEec----CCceeEEecccCCCHHH
Q 009517 399 SPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE--------------GITCNK----AEGAMYLFPRIQLPEKA 460 (533)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------g~~~~~----~~gg~~~~~~~~~~~~~ 460 (533)
+. +....++..++.+.+.+.|++.+ ++.+.. ..|+++.+ .+..
T Consensus 253 ~~--------------l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~-~l~~---- 313 (389)
T 3acz_A 253 KT--------------LPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLF-EMKS---- 313 (389)
T ss_dssp TT--------------HHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE-EESS----
T ss_pred cH--------------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEE-EECC----
Confidence 42 11122333444455555555432 222222 22555443 2321
Q ss_pred HHHHHhcCCCChHHHHHHHHHccceEEEc---C------CCCCCC--------------CCCceEEEEecCCcCcHHHHH
Q 009517 461 IKAAEAEKTVPDAFYCRRLLNATGIVLVP---G------SGFGQV--------------PGTWHFRCTILPQEDKIPAIV 517 (533)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~p---g------~~f~~~--------------~g~~~iRis~~~~~e~i~~~~ 517 (533)
...+..++.+.||.+.+ | ..+... -..++||||++.. +.++++
T Consensus 314 ------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li 379 (389)
T 3acz_A 314 ------------FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDII 379 (389)
T ss_dssp ------------HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHH
T ss_pred ------------HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHH
Confidence 11244677788988877 3 222110 0135999999853 678889
Q ss_pred HHHHHHHH
Q 009517 518 TRLTDFHK 525 (533)
Q Consensus 518 ~~l~~~l~ 525 (533)
+.|.++++
T Consensus 380 ~~l~~al~ 387 (389)
T 3acz_A 380 ADLKQALE 387 (389)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 98888875
No 193
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.94 E-value=2e-25 Score=229.48 Aligned_cols=215 Identities=13% Similarity=0.111 Sum_probs=162.8
Q ss_pred CCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEE
Q 009517 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLV 240 (533)
Q Consensus 165 ~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~ 240 (533)
+.....++++.++++++ . ++.++++++++|+..+++.++ ++||+|+++.|+|+++...+ ...|.+++
T Consensus 63 ~~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~l~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~ 133 (398)
T 1gc0_A 63 SNPTLNLLEARMASLEG------G--EAGLALASGMGAITSTLWTLL-RPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLR 133 (398)
T ss_dssp CCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCSHHHHHHHHTGGGGTCEEE
T ss_pred CChHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHh-cCCCEEEEeCCCchhHHHHHHHHHHHcCCEEE
Confidence 44557788888888874 2 255666666899999999998 79999999999999987766 56799998
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCC
Q 009517 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (533)
Q Consensus 241 ~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~ 320 (533)
.++.. |++++++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|..+.+..
T Consensus 134 ~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~- 196 (398)
T 1gc0_A 134 HVDMA-------DLQALEAAMTP------ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR- 196 (398)
T ss_dssp EECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC-
T ss_pred EECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 88753 79999999876 7999999999999999997 9999999999999999999998755421
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHH-HHHHhhhc--cccCChHHHHHHHH
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVASV--NLCSNISGQILASL 396 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~-~l~~~~~~--~~~~~~~~q~a~~~ 396 (533)
+ + .+ ..+ +++.|+||.+ +.+|+|+ ||+++ +++++. .+...... +.+.+++.++++..
T Consensus 197 -~---~-----~~---~~d---~~~~S~sK~~-~~~~~~~~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 1gc0_A 197 -P---L-----EL---GAD---LVVHSATKYL-SGHGDITAGIVVG---SQALVDRIRLQGLKDMTGAVLSPHDAALLMR 257 (398)
T ss_dssp -G---G-----GG---TCS---EEEEETTTTT-TCSSSCCCEEEEE---CHHHHHHHHHTHHHHHTCCCCCHHHHHHHHH
T ss_pred -c---h-----hh---Cce---EEEECCcccc-CCCCCCeEEEEEE---ChHHHHHHHHHHhhccCCCCCCHHHHHHHHh
Confidence 1 1 11 233 7899999999 6789998 99988 777665 45544332 34567888887777
Q ss_pred HcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009517 397 VMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG 438 (533)
Q Consensus 397 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 438 (533)
.++. +....++..++.+.+.+.|.++++
T Consensus 258 ~l~~--------------~~~~~~~~~~~~~~l~~~L~~~~~ 285 (398)
T 1gc0_A 258 GIKT--------------LNLRMDRHCANAQVLAEFLARQPQ 285 (398)
T ss_dssp HHTT--------------HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ccch--------------HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6641 233344555666667777766543
No 194
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.94 E-value=4.6e-26 Score=234.31 Aligned_cols=312 Identities=13% Similarity=0.117 Sum_probs=202.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE-cCChHHHHHHHHHHhccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL-TDGASPAVHMMMQLLIRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~~~gd~Vl 219 (533)
|+.+++++.+...... ....+.+ ...++.+++.+.+.+.+|.+ ++++|++ |+|+++++..+++.++ ++| .++
T Consensus 52 ~~~v~~a~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~al~~~~~~l~-~~g-v~~ 124 (398)
T 2fyf_A 52 RLEQLQTLTTTAAALF--GTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAFWDAAAFGLI-DKR-SLH 124 (398)
T ss_dssp CHHHHHGGGTTTTTTT--TSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHHHHHHHHHHTC-SSC-EEE
T ss_pred CHHHHHHHhhcCCCcc--CcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhHHHHHHHHHhc-CCC-eEE
Confidence 7888887765211100 0112222 12334444555555545643 3468998 9999999999999998 676 233
Q ss_pred EcCCcCcc-hHHHHHHh--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 220 CPIPQYPL-YSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 220 v~~p~~~~-~~~~~~~~--g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+..+.|.. ....+... |.+++.++++. ++.++.+ +++ ++++|++++|+||||.+++.+++.++
T Consensus 125 v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--g~~~~~~-----i~~------~~~~v~~~~~~nptG~~~~~~~i~~~- 190 (398)
T 2fyf_A 125 LTYGEFSAKFASAVSKNPFVGEPIIITSDP--GSAPEPQ-----TDP------SVDVIAWAHNETSTGVAVAVRRPEGS- 190 (398)
T ss_dssp EECSHHHHHHHHHHHHCTTSCCCEEEECCT--TCCCCCC-----CCT------TCSEEEEESEETTTTEECCCCCCTTC-
T ss_pred EeCCHHHHHHHHHHHHhCCCCceEEEecCC--CCCCCcc-----ccC------CCCEEEEeCcCCCcceecchHHhhhh-
Confidence 33333321 12244555 88888888862 3334421 222 78999999999999999995555543
Q ss_pred HHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 297 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
+|+++|+|++|..+.. + .++ . +.+ +++.|+||++ |++| ++||+++ ++++++.+
T Consensus 191 -----~~~~vivD~a~~~~~~----~-~~~----~-----~~d---i~~~s~sK~~-~~~g-g~g~l~~---~~~~~~~l 243 (398)
T 2fyf_A 191 -----DDALVVIDATSGAGGL----P-VDI----A-----ETD---AYYFAPQKNF-ASDG-GLWLAIM---SPAALSRI 243 (398)
T ss_dssp -----C-CEEEEECTTTTTTS----C-CCG----G-----GCS---EEEECTTSTT-CSCS-SEEEEEE---CHHHHHHH
T ss_pred -----cCCeEEEEeccccCCc----c-cCc----c-----cCc---EEEEecCccc-CCCC-ceEEEEE---CHHHHHHh
Confidence 8999999999986432 1 111 1 123 6789999998 7665 6999998 88988877
Q ss_pred HHhh---------------------h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 009517 377 YKVA---------------------S-VNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTLEDA 432 (533)
Q Consensus 377 ~~~~---------------------~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ 432 (533)
.+.. . ...+++..++.++..+|+ ...++ +++++++++++++++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~~~~~~l~~~ 313 (398)
T 2fyf_A 244 EAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQID----------WLVGNGGLDWAVKRTADSSQRLYSW 313 (398)
T ss_dssp HHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH----------HHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred hcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHHHHHHHHH
Confidence 4321 1 223456666666666663 12222 577888899999999999
Q ss_pred HhcCCCceEec--C--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 433 FNSLEGITCNK--A--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 433 L~~~~g~~~~~--~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
|++++|+.+.. | .+++++|+.++ .+ . +...++.. |.++||.+.+|..+ .+.++||||+.
T Consensus 314 L~~~~g~~~~~~~~~~~~~~~~~~~~~--~~---------~-~~~~l~~~-L~~~gI~v~~g~~~---~~~~~iRis~~~ 377 (398)
T 2fyf_A 314 AQERPYTTPFVTDPGLRSQVVGTIDFV--DD---------V-DAGTVAKI-LRANGIVDTEPYRK---LGRNQLRVAMFP 377 (398)
T ss_dssp HHHSTTEEESCCSGGGBCSSEEEEEEC--TT---------S-CHHHHHHH-HHHTTCBCCSCCTT---TCSSEEEEECCT
T ss_pred HHHcCCceeccCChhhcCCcEEEEECC--CC---------C-CHHHHHHH-HHHCCcEEecCccc---CCCCEEEEEecC
Confidence 99988888773 4 35657776553 11 1 23444444 44569999987322 22359999997
Q ss_pred -CCcCcHHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~~ 526 (533)
.+++++++++++|++++++
T Consensus 378 ~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 378 AVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp TSCHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 6889999999999988754
No 195
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.94 E-value=6.9e-25 Score=225.25 Aligned_cols=325 Identities=11% Similarity=0.071 Sum_probs=216.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcc--cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQG--IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G--~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~ 217 (533)
++++++++.+.+.. .|.+..| ..+||+++|++++ .++|++|+|+++|+..+++.+ . ++||+
T Consensus 11 ~~~v~~a~~~~~~~-------~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~-~~gd~ 74 (394)
T 1o69_A 11 GGNELKYIEEVFKS-------NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGV-KQDDI 74 (394)
T ss_dssp -CCHHHHHHHHHHH-------TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTC-CTTCE
T ss_pred CHHHHHHHHHHHHc-------CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCC-CCCCE
Confidence 57788888888764 2666567 8899999999984 268999999999999999998 7 79999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
|+++.|+|+.+...+...|++++.++++ .+|.+|+++|++++++. +.++++|++++ |||...+ +++|.+
T Consensus 75 Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~---~~~~~~v~~~~---~~G~~~~---l~~i~~ 143 (394)
T 1o69_A 75 VLASSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKEC---EKKPKALILTH---LYGNAAK---MDEIVE 143 (394)
T ss_dssp EEEESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHC---SSCCCEEEEEC---GGGCCCC---HHHHHH
T ss_pred EEECCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcc---cCCceEEEEEC---CCCChhh---HHHHHH
Confidence 9999999999999999999999999987 36789999999999762 11488998886 8997766 999999
Q ss_pred HHHHcCCEEEEccccc-cccccCCCCcccHHHHHhhcCCCCCCceEEEEecC--CccCCCCCCCeeEEEEEecCCHHHHH
Q 009517 298 FCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVRE 374 (533)
Q Consensus 298 l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~gl~G~riG~v~~~~~~~~~~~ 374 (533)
+|+++|+++|+||+|. ++.+.+. +..+ + .+ +.+.|| +|.+ +|.|+||+++ .++++++
T Consensus 144 l~~~~~~~li~Dea~~~g~~~~~~-~~~~-------~----~~---~~~~s~s~~K~l---~~~~~G~~~~--~~~~l~~ 203 (394)
T 1o69_A 144 ICKENDIVLIEDAAEALGSFYKNK-ALGT-------F----GE---FGVYSYNGNKII---TTSGGGMLIG--KNKEKIE 203 (394)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTE-ETTS-------S----SS---EEEEECCTTSSS---CCSSCEEEEE--SCHHHHH
T ss_pred HHHHcCCEEEEECcCcccceeCCc-cccc-------c----cC---cEEEEEeCCccC---CCCCceEEEE--CCHHHHH
Confidence 9999999999999998 6666432 1100 0 12 345566 5654 4789999998 2378888
Q ss_pred HHHHhhhcc-cc--------------CChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 009517 375 QIYKVASVN-LC--------------SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI 439 (533)
Q Consensus 375 ~l~~~~~~~-~~--------------~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 439 (533)
.+....... .+ .+.+...++...+ +.+++..++++++++++.+.|.++ +
T Consensus 204 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--------------~~l~~~~~~~~~~~~~l~~~L~~~--~ 267 (394)
T 1o69_A 204 KARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQM--------------EVLEQRVLKKREIYEWYKEFLGEY--F 267 (394)
T ss_dssp HHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH--------------TTHHHHHHHHHHHHHHHHHHHTTT--E
T ss_pred HHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhccc--c
Confidence 887654311 11 1223333322223 223446677888888999999876 5
Q ss_pred eEecCC----cee-EEecccCCCHH------HHHHHHh----cCCCChHHHHHHHHHccceEEEcCCCCCC-----CC--
Q 009517 440 TCNKAE----GAM-YLFPRIQLPEK------AIKAAEA----EKTVPDAFYCRRLLNATGIVLVPGSGFGQ-----VP-- 497 (533)
Q Consensus 440 ~~~~~~----gg~-~~~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~-- 497 (533)
.+..+. +++ .+++.++.... ....... .+. +...+ .+.|.++||.+++|..... ..
T Consensus 268 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-~~~L~~~gI~v~~~~~~~~~~p~~~~~~ 345 (394)
T 1o69_A 268 SFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHP-KISKL-IEDLKNKQIETRPLWKAMHTQEVFKGAK 345 (394)
T ss_dssp ECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCH-HHHHH-HHHHHHTTCCCBCCCCCGGGCGGGTTCE
T ss_pred cccCCCCCCcceeEEEEEEecchhhcccccccccccccccccccc-CHHHH-HHHHHHcCCcccccCCccccchhhhccC
Confidence 544432 343 23433431100 0000000 000 12233 3556678999999853210 00
Q ss_pred --C--------CceEEEEec--CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 498 --G--------TWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 498 --g--------~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+ ...+|+... .+++++++++++|+++++.-..+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~~~~~ 390 (394)
T 1o69_A 346 AYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKAGSHH 390 (394)
T ss_dssp EEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-----
T ss_pred CCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhccccc
Confidence 0 023444443 88999999999999987765543
No 196
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.94 E-value=1.3e-24 Score=224.57 Aligned_cols=227 Identities=15% Similarity=0.141 Sum_probs=166.1
Q ss_pred ccccCCC--cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----H
Q 009517 160 TGAYSHS--QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----A 233 (533)
Q Consensus 160 ~~~Y~~~--~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~ 233 (533)
.+.|+.. ....+++++++++++ .+++++++|+++|+..+++.++ ++||+|+++.|+|+.....+ .
T Consensus 47 ~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~-~~gd~vi~~~~~~~~~~~~~~~~~~ 117 (412)
T 2cb1_A 47 GYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALL-RPGDEVVAAKGLFGQTIGLFGQVLS 117 (412)
T ss_dssp SCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTC-CTTCEEEEETTCCHHHHHHHHHTTT
T ss_pred CcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCchhHHHHHHHHHH
Confidence 3456644 557888999988874 2489999999999999999987 79999999999998766554 3
Q ss_pred HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 009517 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (533)
Q Consensus 234 ~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~ 313 (533)
..|.+++.++. |+++|++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|.
T Consensus 118 ~~g~~~~~~~~--------~~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~ 180 (412)
T 2cb1_A 118 LMGVTVRYVDP--------EPEAVREALSA------KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFG 180 (412)
T ss_dssp TTTCEEEEECS--------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred HcCCEEEEECC--------CHHHHHHHhcc------CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCc
Confidence 47889888875 38899998876 7999999999999999997 9999999999999999999998
Q ss_pred cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC------------------------
Q 009517 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS------------------------ 369 (533)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~------------------------ 369 (533)
.+.+... + . .. ..+ +++.|+||.+ +.+|.|+|++++....
T Consensus 181 ~~~~~~~-~---~-----~~---~~d---i~~~S~~K~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (412)
T 2cb1_A 181 AAGALCR-P---L-----AW---GAH---VVVESLTKWA-SGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALR 244 (412)
T ss_dssp TTTTSCC-G---G-----GG---TCS---EEEEETTTTT-TCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHG
T ss_pred cccccCC-c---c-----cc---CCe---EEEECCcccc-cCCCCcEEEEEEeccccccccccccccccccccchhhccc
Confidence 7522111 1 1 11 234 8899999999 6689999999874211
Q ss_pred -HHHHHHHHHhh-h-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe
Q 009517 370 -AEVREQIYKVA-S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN 442 (533)
Q Consensus 370 -~~~~~~l~~~~-~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 442 (533)
.++.+.++... . .....++...+++...++ .+....++..++.+.+.+.|.+.+++..+
T Consensus 245 ~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~--------------~l~~~~~~~~~~~~~l~~~L~~~~~v~~v 306 (412)
T 2cb1_A 245 ARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE--------------TVALRVARMSETARFLAERLQGHPKVKAL 306 (412)
T ss_dssp GGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG--------------GHHHHHHHHHHHHHHHHHHHHTCTTCSEE
T ss_pred hHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc--------------hHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 04445554433 2 222345555555544442 12233444566778899999888887744
No 197
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.94 E-value=3.7e-26 Score=239.97 Aligned_cols=328 Identities=14% Similarity=0.129 Sum_probs=217.0
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc-------cC
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-------RS 213 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-------~~ 213 (533)
++++++++.+++..........|+. ....+|++++++.+.+..+ ...++|++++||++|++.+++.++ ..
T Consensus 81 ~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~ 157 (472)
T 1ohv_A 81 HPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACGSCSNENAFKTIFMWYRSKERG 157 (472)
T ss_dssp CHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCchhHHHHHHHHHHHHhhhhccC
Confidence 7899999988764210000112333 2357899999998776544 356799999999999999999873 01
Q ss_pred -----------------CC---CeEEEcCCcCcchHHHHHHh-CCe-------------EEEEecCCCC---C--C----
Q 009517 214 -----------------EN---DGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEAT---G--W---- 250 (533)
Q Consensus 214 -----------------~g---d~Vlv~~p~~~~~~~~~~~~-g~~-------------~~~v~~~~~~---~--~---- 250 (533)
+| ++|++.+++|+++...+... |.. .+.+|..... . +
T Consensus 158 ~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 237 (472)
T 1ohv_A 158 QSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQE 237 (472)
T ss_dssp TCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHH
T ss_pred cccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhH
Confidence 35 89999999999987655433 321 1122211000 0 0
Q ss_pred -CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHH
Q 009517 251 -GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (533)
Q Consensus 251 -~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~ 328 (533)
..|+++|+++|++....+.++++|++++.+|+||. +++++.+++|+++|++||+++|+||+|++|.+.|. +.++..
T Consensus 238 ~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~--~~~~~~ 315 (472)
T 1ohv_A 238 EARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGK--FWAHEH 315 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGG
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCC--chhccc
Confidence 12688999999764322236888888877888996 67899999999999999999999999998766542 222221
Q ss_pred HHhhcCCCC--CCceEEEEecCCcc-CCCCCCCeeEEEEEecCCHHHHHHHHHhh-hccccCChHHHHHHHHHcCCCCCC
Q 009517 329 VSRSMGYGE--KDISLVSFQSVSKG-YYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVG 404 (533)
Q Consensus 329 ~~~~~~~~~--~~~~vi~i~S~SK~-~~gl~G~riG~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~~L~~~~~~ 404 (533)
+ ++ . +| +.||||. + | | ||++ ++++. .+.... ..++++++++++++.++|+
T Consensus 316 ~--gv---~~~~D-----i~t~sK~~l-~--G---G~~~----~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~----- 369 (472)
T 1ohv_A 316 W--GL---DDPAD-----VMTFSKKMM-T--G---GFFH----KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVIN----- 369 (472)
T ss_dssp G--CC---SSCCS-----EEEECGGGS-S--E---EEEE----CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHH-----
T ss_pred c--CC---CCCCC-----EEEEccccc-c--C---CccC----chhhc-ccccccccCccCccHHHHHHHHHHHH-----
Confidence 1 11 2 45 5589998 5 3 4 6664 44442 122222 2567889999998888873
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CC-ceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHH
Q 009517 405 DESYESYCAERDGILSSLARRAKTLEDAFNSL----EG-ITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRL 479 (533)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g-~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 479 (533)
.... +.+.++++++++++++.|+++ |+ +..+++.|.|+.+ ++. ... ....++..+
T Consensus 370 ------~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~-~~~--~~~----------~~~~~~~~l 429 (472)
T 1ohv_A 370 ------IIKR-EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSF-DTP--DES----------IRNKLISIA 429 (472)
T ss_dssp ------HHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEE-ECS--SHH----------HHHHHHHHH
T ss_pred ------HHHh-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEE-EeC--Chh----------HHHHHHHHH
Confidence 1111 345677777888888877664 53 5557777766554 443 110 123445555
Q ss_pred HHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 480 LNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 480 l~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+ ++||.+.|+. .++|||++. .++++|++++++|+++++++
T Consensus 430 ~-~~Gv~~~~~g-------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 430 R-NKGVMLGGCG-------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp H-HTTEECEEET-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred H-HCCeEEecCC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5 5899999841 238999774 88999999999999988653
No 198
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=1.9e-26 Score=234.48 Aligned_cols=306 Identities=16% Similarity=0.189 Sum_probs=217.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCeEE
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~Vl 219 (533)
++++.+++.+.+.. ..|.+..+..+|+++++++++ .+++++++||++|+..+++.+ . .+||+|+
T Consensus 15 ~~~v~~a~~~~~~~------~~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~-~~gd~Vi 79 (367)
T 3nyt_A 15 KDKIDAGIQRVLRH------GQYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGV-GPGDEVI 79 (367)
T ss_dssp HHHHHHHHHHHHHH------CCCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHhc------CCccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCC-CCcCEEE
Confidence 56777777777765 246667778999999999985 247999999999999999999 6 7999999
Q ss_pred EcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 220 v~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
++.|+|+.+...+...|++++.++++++ ++.+|++++++++++ ++++|+ |+||||...+ +++|.++|
T Consensus 80 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~~~~G~~~~---~~~i~~la 146 (367)
T 3nyt_A 80 TPGFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITP------RTKAII---PVSLYGQCAD---FDAINAIA 146 (367)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHH
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCc------CCcEEE---eeCCccChhh---HHHHHHHH
Confidence 9999999999999999999999999864 578999999999865 788887 8889998877 88999999
Q ss_pred HHcCCEEEEcccccc-ccccCCCCcccHHHHHhhcCCCCCCceEEEEecC--CccCCCCCCCeeEEEEEecCCHHHHHHH
Q 009517 300 KKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQI 376 (533)
Q Consensus 300 ~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~gl~G~riG~v~~~~~~~~~~~~l 376 (533)
+++|+++|+|++|.. ..+.+. ... . ..| +++.|| +|.+ |.+|. .|++++ .++++++.+
T Consensus 147 ~~~~~~li~D~a~~~g~~~~~~-~~~-------~----~~d---i~~~Sf~~~K~l-~~~g~-gg~~~~--~~~~l~~~~ 207 (367)
T 3nyt_A 147 SKYGIPVIEDAAQSFGASYKGK-RSC-------N----LST---VACTSFFPSAPL-GCYGD-GGAIFT--NDDELATAI 207 (367)
T ss_dssp HHTTCCBEEECTTTTTCEETTE-ETT-------S----SSS---EEEEECCTTSSS-CCSSC-CEEEEE--SCHHHHHHH
T ss_pred HHcCCEEEEECccccCCeECCe-ecc-------C----CCC---EEEEECCCCCcC-CCcCc-eeEEEe--CCHHHHHHH
Confidence 999999999999974 333321 100 0 123 778887 8998 65576 888887 357888888
Q ss_pred HHhhhc-------------cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec
Q 009517 377 YKVASV-------------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK 443 (533)
Q Consensus 377 ~~~~~~-------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 443 (533)
...... ++..+.+.++++...++ .++...++.++.++++.+.|+++ ++.+..
T Consensus 208 ~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~--------------~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~ 272 (367)
T 3nyt_A 208 RQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLE--------------IFEEEIALRQKVAAEYDLSLKQV-GIGTPF 272 (367)
T ss_dssp HHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHH--------------THHHHHHHHHHHHHHHHHHHHHT-TCCCCC
T ss_pred HHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhccC-CeeccC
Confidence 765431 24455666655555442 23444555666777888888887 544322
Q ss_pred -CCceeEEec--ccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCC--------CCCC---------CCceEE
Q 009517 444 -AEGAMYLFP--RIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGF--------GQVP---------GTWHFR 503 (533)
Q Consensus 444 -~~gg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f--------~~~~---------g~~~iR 503 (533)
+.+....|. .+..+ +... +.+.|+++||.+.++... .... ....+|
T Consensus 273 ~~~~~~~~~~~~~~~~~-------------~~~~-l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (367)
T 3nyt_A 273 IEVNNISVYAQYTVRMD-------------NRES-VQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMS 338 (367)
T ss_dssp CCTTEECCCSSEEEECS-------------SHHH-HHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEE
T ss_pred CCCCCceeeEEEEEEeC-------------CHHH-HHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEE
Confidence 222111111 12211 1233 345567789999876431 0000 023789
Q ss_pred EEec--CCcCcHHHHHHHHHH
Q 009517 504 CTIL--PQEDKIPAIVTRLTD 522 (533)
Q Consensus 504 is~~--~~~e~i~~~~~~l~~ 522 (533)
+++. .++++++++++.|++
T Consensus 339 lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 339 LPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp ECCCTTCCHHHHHHHHHHHHC
T ss_pred ccCCCCCCHHHHHHHHHHHHH
Confidence 9985 788888877777654
No 199
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.94 E-value=1.5e-24 Score=221.54 Aligned_cols=303 Identities=11% Similarity=0.129 Sum_probs=215.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH--HHHHHhC--CeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS--ASIALHG--GTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~--~~~~~~g--~~~~~v~~ 244 (533)
..++.+++++.+.+.+|.+ +.|++|+|++++++.++..+ .+||+|++++++|+++. ..+...| .+++.++.
T Consensus 33 ~~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~--~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 107 (379)
T 3ke3_A 33 FQEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL--TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTA 107 (379)
T ss_dssp HHHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH--CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC--CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEec
Confidence 3456666666666666633 67899999999999998665 58999999999998754 3455556 47777776
Q ss_pred CCC------CCC-CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 009517 245 DEA------TGW-GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (533)
Q Consensus 245 ~~~------~~~-~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~ 317 (533)
+.. ..| .+|++++++++++. ++++|++++++||||.+++.+++++|+++|++||+++|+|++++ .
T Consensus 108 ~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g-- 179 (379)
T 3ke3_A 108 ERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G-- 179 (379)
T ss_dssp EESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T--
T ss_pred cccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C--
Confidence 431 112 47999999999754 68999999999999999999999999999999999999999986 2
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh----------------
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS---------------- 381 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~---------------- 381 (533)
+ . ...+... .-| +++.|++|+++| +.++|++++ ++++++.+.....
T Consensus 180 -~-~-~~~~~~~-------~~d---~~~~s~~K~l~~--~~g~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 241 (379)
T 3ke3_A 180 -C-V-WLDMKEL-------GID---VLISAPQKGWSS--TPCAGLVML---SAAAIKKVESTESNCFSLDLKQWLTIMRA 241 (379)
T ss_dssp -T-C-CCCHHHH-------TCS---EEEECTTTTTCS--CCCEEEEEE---CHHHHHHHHTCCCSCSTTCHHHHHHHHHH
T ss_pred -C-c-ccccccc-------CCC---EEEecchhhcCC--CCceEEEEE---CHHHHHhhhcCCCCceeecHHHHHHHHHh
Confidence 1 1 2222221 234 678899999843 345899988 8888887764210
Q ss_pred -------ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCc---eeEE
Q 009517 382 -------VNLCSNISGQILASLVMSPPKVGDESYESYCAE-RDGILSSLARRAKTLEDAFNSLEGITCNKAEG---AMYL 450 (533)
Q Consensus 382 -------~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g---g~~~ 450 (533)
..+++++..++++.++|+ ...++ ++.+.++++++++++++.|+++ |+.+..+.+ ....
T Consensus 242 ~~~g~~~~~~t~~~~~~~a~~aal~----------~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~ 310 (379)
T 3ke3_A 242 YENGGHAYHATMPTDSLRQFRDAIL----------EAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVV 310 (379)
T ss_dssp HHTTSCCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEE
T ss_pred hhccCCCCCCCCCHHHHHHHHHHHH----------HHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEE
Confidence 012567777777766663 11222 5678888899999999999998 887765432 2122
Q ss_pred ecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--CCCCceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 451 FPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--VPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
.+..+ .. +..+ ...|.++||.+.+|..+.. ..+.+.||||+. +++++|++++++|++++++
T Consensus 311 ~~~~~--~~------------~~~~-~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 311 VSYTE--RD------------DMHK-GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp EEECS--CH------------HHHS-SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred EEccC--Cc------------chHH-HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 21121 10 1111 2456778999999987642 222458999995 7899999999999999987
Q ss_pred HH
Q 009517 527 FM 528 (533)
Q Consensus 527 ~~ 528 (533)
+.
T Consensus 376 ~~ 377 (379)
T 3ke3_A 376 VL 377 (379)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 200
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.94 E-value=9.7e-27 Score=240.14 Aligned_cols=383 Identities=12% Similarity=0.010 Sum_probs=249.0
Q ss_pred CCCCCcccccCcCcccccCccccccchHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCC
Q 009517 50 PTSSPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPS 129 (533)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~ 129 (533)
+.+++.+.+..+++.++...+.|+ ++.++++...++.||++ |||+..|....
T Consensus 48 ~~~a~~~~pgg~~~~~~~~~~~P~--~i~~a~G~~l~D~dG~~------ylD~~~g~~~~-------------------- 99 (454)
T 4ao9_A 48 FEAQARYMPGANSRSVLFYAPFPL--TIARGEGAALWDADGHR------YADFIAEYTAG-------------------- 99 (454)
T ss_dssp HHHHTTTSGGGCSSGGGCCSSCCC--EEEEEETTEEEETTCCE------EEESSGGGGTT--------------------
T ss_pred HHHHhhhCCCCCCCCccccCCCCc--cEEEeecCEEEECCCCE------EEEccccHHhh--------------------
Confidence 344455566667777776655544 77888888888888888 88886664221
Q ss_pred CCCcccccCCCCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 009517 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (533)
Q Consensus 130 ~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 209 (533)
..+++ ++++++++.+++.+.. ....+..-..+|.+.+++.+ ...+.|+++++|+||++.+++.
T Consensus 100 --~lGH~----hp~v~~Av~~q~~~~~----~~~~~~~~~~~lae~l~~~~-------p~~~~v~f~~SGsEA~e~Aikl 162 (454)
T 4ao9_A 100 --VYGHS----APEIRDAVIEAMQGGI----NLTGHNLLEGRLARLICERF-------PQIEQLRFTNSGTEANLMALTA 162 (454)
T ss_dssp --TTCSC----CHHHHHHHHHHHHTCS----CCCSEESSHHHHHHHHHHHS-------TTCSEEEEESSHHHHHHHHHHH
T ss_pred --cccCC----CHHHHHHHHHHHhcCC----CccCCcHHHHHHHHHHHHhC-------CCCCEEEEeCchHHHHHHHHHH
Confidence 11222 6999999999998632 22222222455666666654 2367899999999999999998
Q ss_pred hccCCC-CeEEEcCCcCcchHHHHHHh------CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCC
Q 009517 210 LIRSEN-DGILCPIPQYPLYSASIALH------GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (533)
Q Consensus 210 l~~~~g-d~Vlv~~p~~~~~~~~~~~~------g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NP 282 (533)
++...| ++|+....+|++....+... ......+|+ -|++.+++.+++. ++++.+||++..++.
T Consensus 163 Ar~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~---~~~iAavIvEPv~g~ 232 (454)
T 4ao9_A 163 ALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERH---GPEIAVVLVEPMQGA 232 (454)
T ss_dssp HHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHT---GGGEEEEEECSEEST
T ss_pred HHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhc---CCceEEEEeccccCC
Confidence 863233 78999999999865322111 112223332 2789999999864 346888888766666
Q ss_pred Ccc-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeE
Q 009517 283 TGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (533)
Q Consensus 283 tG~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG 361 (533)
.|. .++++.|++|.++|++||+++|+||++++ ..|. ... .+..++.|| +.+++|.++ .|+++|
T Consensus 233 ~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~--~~a-----~e~~gv~PD-----i~t~gK~lg--gG~Pig 296 (454)
T 4ao9_A 233 SGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAP--HGL-----ANKLGIRSD-----LTTLGKYIG--GGMSFG 296 (454)
T ss_dssp TTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGST--TCH-----HHHHTCCCS-----EEEEEGGGG--TTSSCE
T ss_pred CCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcc--ccc-----hhccCCCCc-----EEEeccccC--CCCcce
Confidence 775 56788899999999999999999999986 4443 111 122233788 668999995 489999
Q ss_pred EEEEecCCHHHHHHHHHh-----hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 362 YMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 362 ~v~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
++++ .+++++.+... +..|++.|+++++++.+.|+... .+.+.++++++.++|++.|+++
T Consensus 297 a~~~---~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~------------~~~~~~~~~~~g~~l~~~L~~l 361 (454)
T 4ao9_A 297 AFGG---RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLF------------TPEAAGALAERGEALRARLNAL 361 (454)
T ss_dssp EEEE---CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTS------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeee---HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHh------------ccChhHHHHHHHHHHHHHHHHH
Confidence 9998 99999887542 23678899999999988875221 1334455566666666666553
Q ss_pred ----CCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEecCCcCc
Q 009517 437 ----EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDK 512 (533)
Q Consensus 437 ----~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~~~~e~ 512 (533)
+-+..+...|.|+.+.-.+.+..........+......++..+ .++||++.|. + .+.+++.+|+++
T Consensus 362 ~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~Gv~~~p~-------~--~~~~s~~~T~~d 431 (454)
T 4ao9_A 362 CANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHL-LNEDIYSSPR-------G--FVVLSLPLTDAD 431 (454)
T ss_dssp HHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHH-HHTTEECCTT-------C--EEECCTTCCHHH
T ss_pred HhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHH-HHCCEEEcCC-------C--CEEEeCCCCHHH
Confidence 3333456666655432111111000000000000112334444 4679999862 2 455677799999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009517 513 IPAIVTRLTDFHKNFM 528 (533)
Q Consensus 513 i~~~~~~l~~~l~~~~ 528 (533)
|++++++|++++.++.
T Consensus 432 Id~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 432 IDRYVAAIGSFIGGHG 447 (454)
T ss_dssp HHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998753
No 201
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.94 E-value=1.6e-24 Score=229.19 Aligned_cols=335 Identities=9% Similarity=-0.002 Sum_probs=231.8
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEE---EcCChHHHHHHHHHHhccCC---
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF---LTDGASPAVHMMMQLLIRSE--- 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~---~t~G~~~al~~~~~~l~~~~--- 214 (533)
++.+.+++.+.+... ...|....+..++++.+.+++.+.+|.+.++++++ +|+|+++++..++.++. .+
T Consensus 69 ~~~v~~~l~~~~~~~----~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~-~~~~~ 143 (502)
T 3hbx_A 69 EPECDKLIMSSINKN----YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK-RKWQN 143 (502)
T ss_dssp CHHHHHHHHHTTTCB----TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHhccC----CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH-HHHhH
Confidence 677888877776552 33344455578899999999999889765466554 48999999999988876 34
Q ss_pred -----CC-----eEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 215 -----ND-----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 215 -----gd-----~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
|+ +|+++.++|..+...+...|++++.+++++ +++.+|+++|+++|++ ++++|++++|+||||
T Consensus 144 ~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG 216 (502)
T 3hbx_A 144 KRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDE------NTICVAAILGSTLNG 216 (502)
T ss_dssp HHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCT------TEEEEEEEBSCTTTC
T ss_pred HHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhh------CCEEEEEecCCCCCC
Confidence 66 899999999999999999999999999875 3578999999999987 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHc------CCEEEEccccccccc---cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCC
Q 009517 285 QVLAEENQRAIVDFCKKE------GLVLLADEVYQENVY---VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~------~~~lI~De~y~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl 355 (533)
.+.+ +++|.++|+++ |+++++|++|.++.. .+..+ ..+. ..+ -.++..+.+|.+ +
T Consensus 217 ~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~-~~~~---------~~~-~D~v~~s~hK~l--~ 280 (502)
T 3hbx_A 217 EFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDFR---------LPL-VKSINVSGHKYG--L 280 (502)
T ss_dssp CBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-CSTT---------STT-EEEEEEETTTTT--C
T ss_pred cccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccc-cccC---------CCC-ceEEEECccccc--C
Confidence 9988 88899999999 999999999987641 12111 1110 122 235567889975 3
Q ss_pred CCCeeEEEEEecCCHHHHHHHHHhhhcc-----------ccC---ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHH
Q 009517 356 CGKRGGYMEVTGFSAEVREQIYKVASVN-----------LCS---NISGQILASLVMSPPKVGDESYESYCAERDGILSS 421 (533)
Q Consensus 356 ~G~riG~v~~~~~~~~~~~~l~~~~~~~-----------~~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 421 (533)
.+.++||+++ .+++.+.........+ +.. ..+++.++...+. .+.+..+.++
T Consensus 281 ~p~g~G~~~~--~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg------------~~g~~~~~~~ 346 (502)
T 3hbx_A 281 VYAGIGWVIW--RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG------------HEGYRNVMEN 346 (502)
T ss_dssp CCSSCEEEEE--SSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH------------HHHHHHHHHH
T ss_pred CCCCeEEEEE--eCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH------------HHHHHHHHHH
Confidence 5778999887 2444432111110000 111 2233333333321 2334667777
Q ss_pred HHHHHHHHHHHHhcCCCceEecC--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCC
Q 009517 422 LARRAKTLEDAFNSLEGITCNKA--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGT 499 (533)
Q Consensus 422 ~~~~~~~l~~~L~~~~g~~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~ 499 (533)
..++++++.+.|++++++.++.+ ..+++ +++++... +. +...+ .+.|.++||.+..........+.
T Consensus 347 ~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v-~f~~~~~~---------~~-~~~~l-~~~L~~~Gi~v~~~~~p~~~~~~ 414 (502)
T 3hbx_A 347 CRENMIVLREGLEKTERFNIVSKDEGVPLV-AFSLKDSS---------CH-TEFEI-SDMLRRYGWIVPAYTMPPNAQHI 414 (502)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCSSSSSEE-EEEESSCS---------SC-CHHHH-HHHHHTTTCBCCEEECCTTCTTC
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCceEE-EEEecCCC---------cC-CHHHH-HHHHHhCCcEEeeccCCcccCCc
Confidence 88888899999999977988765 44444 33343110 01 12233 35567889987543222222344
Q ss_pred ceEEEEec--CCcCcHHHHHHHHHHHHHHHHH
Q 009517 500 WHFRCTIL--PQEDKIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 500 ~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 529 (533)
.++||++. .+.++++.+++.|+++++.+.+
T Consensus 415 ~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 415 TVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 58999996 7889999999999999987754
No 202
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.93 E-value=2.6e-24 Score=228.06 Aligned_cols=332 Identities=12% Similarity=0.054 Sum_probs=226.6
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc-------CCC-----C-eEEEcCCcCc
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------SEN-----D-GILCPIPQYP 226 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------~~g-----d-~Vlv~~p~~~ 226 (533)
...|....+..++++++.+++.+.+|.+.+.+++++|+|+++|+..++.+++. .+| + .|+++.+.|+
T Consensus 121 ~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~ 200 (504)
T 2okj_A 121 MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHY 200 (504)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred CCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchH
Confidence 34566666678889999889888888654477999999999999999998851 146 6 7999999999
Q ss_pred chHHHHHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 227 LYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 227 ~~~~~~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
.+...+...|. +++.+|+++ ++.+|+++|+++|++....|.++++|++++|+||||.+.+ +++|+++|++||
T Consensus 201 s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g 275 (504)
T 2okj_A 201 SIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYN 275 (504)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcC
Confidence 99999998887 899999863 5789999999999876555657899999999999999977 899999999999
Q ss_pred CEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhcc
Q 009517 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN 383 (533)
Q Consensus 304 ~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~ 383 (533)
+++++|++|.++.+... .+.. ....+. ..| +++.+++|.+ +.| +++|++++ .+++++..........
T Consensus 276 ~~lhvD~a~~~~~~~~~-~~~~---~~~g~~--~~D---~i~~~~hK~~-~~p-~~~g~l~~--~~~~~~~~~~~~~~~~ 342 (504)
T 2okj_A 276 LWLHVDAAWGGGLLMSR-KHRH---KLNGIE--RAN---SVTWNPHKMM-GVL-LQCSAILV--KEKGILQGCNQMCAGY 342 (504)
T ss_dssp CEEEEEETTGGGGGGCT-TTGG---GGTTGG--GCS---EEEECTTSTT-CCC-SCCEEEEE--SSTTHHHHHHCCCCSS
T ss_pred CEEEEehhhhhHHHhCH-hhHh---hcCCcc--cCC---EEEECchhhc-CCC-cceEEEEE--ECHHHHHHHhcCCCcc
Confidence 99999999998765321 1111 111110 134 5677899988 533 78999998 2345655432111100
Q ss_pred c----------------------cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 384 L----------------------CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 384 ~----------------------~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
. ....+.+.++..++. .+.++++.++..++++++.+.|++++|+++
T Consensus 343 l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg------------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 410 (504)
T 2okj_A 343 LFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG------------TVGFENQINKCLELAEYLYAKIKNREEFEM 410 (504)
T ss_dssp SCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred ccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh------------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 0 012444555444431 234566778888999999999999889988
Q ss_pred ec---CCceeEEecccCCCHHHH------HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---CC
Q 009517 442 NK---AEGAMYLFPRIQLPEKAI------KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL---PQ 509 (533)
Q Consensus 442 ~~---~~gg~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~---~~ 509 (533)
+. |..++++|..++ .... +..... ......+... |.+.|+.+..+..+. ...+++|++++ .+
T Consensus 411 ~~~~~p~~~~v~f~~~~--~~~~~~~~~~~~~~~~-~~~~~~l~~~-L~~~G~~~~~~~~~~--~~~~~lRis~~~~~~t 484 (504)
T 2okj_A 411 VFNGEPEHTNVCFWYIP--QSLRGVPDSPQRREKL-HKVAPKIKAL-MMESGTTMVGYQPQG--DKANFFRMVISNPAAT 484 (504)
T ss_dssp SSSSCCSSSCEEEEECC--GGGSSCCCCHHHHHHH-TTHHHHHHHH-HHHHTSCEEEEEEET--TEEEEEEECCCCTTCC
T ss_pred EecCCCCeEEEEEEEeC--ccccccccchhhHHHH-HHHHHHHHHH-HHhCCcEEEEeeEEC--CceEEEEEEeCCCCCC
Confidence 74 777777764322 1000 000000 0001233334 455675433222222 11248999996 68
Q ss_pred cCcHHHHHHHHHHHHHHH
Q 009517 510 EDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 510 ~e~i~~~~~~l~~~l~~~ 527 (533)
+++|++++++|+++++++
T Consensus 485 ~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 485 QSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 889999999999887654
No 203
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.93 E-value=1.3e-23 Score=221.84 Aligned_cols=338 Identities=10% Similarity=0.036 Sum_probs=229.8
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCC-------CCCEEEcCChHHHHHHHHHHhccCC
Q 009517 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-------PNDIFLTDGASPAVHMMMQLLIRSE 214 (533)
Q Consensus 142 ~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~~~ 214 (533)
..+.+.+...+.. ....|....+..++++++++++.+.+|.+.+ ...+++|+|+++|+..++.++. ++
T Consensus 88 ~~~~~~~~~~~n~----~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~-~~ 162 (486)
T 1js3_A 88 AMLADMLCGAIGC----IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR-TK 162 (486)
T ss_dssp HHHHHHHHHHHCC----CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHhCc----CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH-HH
Confidence 3455555555543 2456777777889999999999998886532 2468999999999999987764 21
Q ss_pred ---------CC--------e--EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE
Q 009517 215 ---------ND--------G--ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV 275 (533)
Q Consensus 215 ---------gd--------~--Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~ii 275 (533)
|| + |+++.++|..+..+++..|++++.+|++ .++.+|+++|+++|++..+.|..+.+|+
T Consensus 163 ~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv 240 (486)
T 1js3_A 163 VVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVV 240 (486)
T ss_dssp HHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEE
Confidence 42 3 7889999999999999999999999986 3678999999999988544444456889
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCC
Q 009517 276 VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (533)
Q Consensus 276 l~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl 355 (533)
+++|+||||.+-+ +++|+++|++||+++++|++|.++.+... .... ....+. ..| .+..+++|.+ ++
T Consensus 241 ~~~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~-~~~~---~~~g~~--~ad---si~~~~hK~~-~~ 307 (486)
T 1js3_A 241 ATLGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICP-EFRH---LLNGVE--FAD---SFNFNPHKWL-LV 307 (486)
T ss_dssp EEBSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGST-TTGG---GGTTGG--GCS---EEEECHHHHS-SC
T ss_pred EeCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCH-HHHH---HhcCcc--ccC---eeEEchhhhc-CC
Confidence 9999999999866 99999999999999999999988654321 1111 111110 123 3456889988 54
Q ss_pred CCCeeEEEEEecCCHHH-HHHHHH----hhh--c---------------cccCChHHHHHHHHHcCCCCCCChhHHHHHH
Q 009517 356 CGKRGGYMEVTGFSAEV-REQIYK----VAS--V---------------NLCSNISGQILASLVMSPPKVGDESYESYCA 413 (533)
Q Consensus 356 ~G~riG~v~~~~~~~~~-~~~l~~----~~~--~---------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~ 413 (533)
| +++||+++ .+++. .+.+.. +.. . +.....+.+.++...+ -.+
T Consensus 308 p-~~~G~l~~--~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~------------g~~ 372 (486)
T 1js3_A 308 N-FDCSAMWV--KRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY------------GVK 372 (486)
T ss_dssp C-SSCEEEEE--SCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH------------HHH
T ss_pred C-cceEEEEE--eCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH------------hHH
Confidence 4 89999988 34443 333210 000 0 0011234444444333 124
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEec-CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC
Q 009517 414 ERDGILSSLARRAKTLEDAFNSLEGITCNK-AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG 492 (533)
Q Consensus 414 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 492 (533)
.++++.+++.++++++.+.|+++||++++. |+.+++.| .+...... ...+...+ .+.|+.+.++..
T Consensus 373 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~~-----------~~~l~~~L-~~~g~~~~~~~~ 439 (486)
T 1js3_A 373 GLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCF-RLKGSDGL-----------NEALLERI-NSARKIHLVPCR 439 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEE-EESSCHHH-----------HHHHHHHH-HHHTSCBCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEE-EecChHHH-----------HHHHHHHH-HhcCCEEEEEEE
Confidence 467778888889999999999988998864 67777665 23211110 23344444 445654333222
Q ss_pred CCCCCCCceEEEEec---CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 493 FGQVPGTWHFRCTIL---PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 493 f~~~~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
|. +.+++|+++. .++++|++++++|+++++++.++
T Consensus 440 ~~---~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 440 LR---GQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp ET---TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 32 3459999984 46779999999999999887654
No 204
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.93 E-value=7.8e-24 Score=220.44 Aligned_cols=311 Identities=12% Similarity=0.094 Sum_probs=212.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh---------c
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---------I 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---------~ 211 (533)
++++++++.+.+.. ..|.+..+..+|+++++++++ . ++++++++|++|+..+++++ .
T Consensus 42 ~~~~~~a~~~~~~~------~~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~ 107 (437)
T 3bb8_A 42 GTKELQLMVEASLD------GWLTTGRFNDAFEKKLGEYLG------V--PYVLTTTSGSSANLLALTALTSPKLGVRAL 107 (437)
T ss_dssp CHHHHHHHHHHHHH------CCCBSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTCGGGGGGSC
T ss_pred CHHHHHHHHHHHHc------CCcCCChHHHHHHHHHHHHHC------C--CcEEEeCCHHHHHHHHHHHhhhcccccccC
Confidence 57888998888865 135556678999999999985 2 26778888889999999998 5
Q ss_pred cCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC-CCCCCccCCCHH
Q 009517 212 RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQVLAEE 290 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~-p~NPtG~~~s~~ 290 (533)
.+||+|+++.|+|+.+...+...|++++.++++++ ++.+|+++|++++++ ++++|++++ ++|| .+
T Consensus 108 -~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~~~g~~----~~-- 173 (437)
T 3bb8_A 108 -KPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIP-TYNVNASLIEAAVSD------KTKAIMIAHTLGNL----FD-- 173 (437)
T ss_dssp -CTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETT-TTEECGGGHHHHCCT------TEEEEEEECGGGCC----CC--
T ss_pred -CCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCc-cCCcCHHHHHHhcCC------CCeEEEEeCCCCCh----hc--
Confidence 78999999999999999999999999999998753 578999999999876 799999984 5555 44
Q ss_pred HHHHHHHHHHHcCCEEEEcccccc-ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCC
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~ 369 (533)
+++|.++|+++|+++|+|++|.. ..+++. . + .. ..| +++.||+|+. +++|.++|++++ +
T Consensus 174 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~------~-~~----~~d---~~~~s~~~~k-~l~~g~gg~~~~---~ 233 (437)
T 3bb8_A 174 -LAEVRRVADKYNLWLIEDCCDALGSTYDGK-M------A-GT----FGD---IGTVSFYPAK-HITMGEGGAVFT---Q 233 (437)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTCTTCEETTE-E------T-TS----SSS---EEEEECSTTS-SSCCSSCEEEEE---S
T ss_pred -HHHHHHHHHHcCCEEEEECccccCceECCe-e------c-cc----ccC---EEEEECcCCc-CCCCCCeEEEEe---C
Confidence 89999999999999999999984 333211 0 0 00 134 6678998887 688999999998 6
Q ss_pred HHH-HHHHHHhhh--cc--------------------------------------ccCChHHHHHHHHHcCCCCCCChhH
Q 009517 370 AEV-REQIYKVAS--VN--------------------------------------LCSNISGQILASLVMSPPKVGDESY 408 (533)
Q Consensus 370 ~~~-~~~l~~~~~--~~--------------------------------------~~~~~~~q~a~~~~L~~~~~~~~~~ 408 (533)
++. ...+..+.. .. +..+.+.++++...|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l---------- 303 (437)
T 3bb8_A 234 SAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQL---------- 303 (437)
T ss_dssp CHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHH----------
T ss_pred CHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHH----------
Confidence 444 333332211 00 011344444444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCC--c---e--eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHH
Q 009517 409 ESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAE--G---A--MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLN 481 (533)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--g---g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 481 (533)
+.++...++.+++++++.+.|++++|+...+.. . + .|.+ .+..+. +. +...+ ...|.
T Consensus 304 ----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~-~~~~l-~~~L~ 367 (437)
T 3bb8_A 304 ----ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPI-TLKEDS---------GV-SRIDL-VKFLD 367 (437)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEE-EECGGG---------SS-CHHHH-HHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEE-EECCcC---------cC-cHHHH-HHHHH
Confidence 222333444466778899999888776554321 1 2 1222 122110 01 12333 35566
Q ss_pred ccceEEEcCCCCCC--CC-----C--------------CceEEEEec--CCcCcHHHHHHHHHHHHH
Q 009517 482 ATGIVLVPGSGFGQ--VP-----G--------------TWHFRCTIL--PQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 482 ~~gV~v~pg~~f~~--~~-----g--------------~~~iRis~~--~~~e~i~~~~~~l~~~l~ 525 (533)
++||.+.++..... .+ + .+.|||++. .++++|+++++.|+++++
T Consensus 368 ~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 368 EAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 78999998764210 00 0 124999985 789999999999988754
No 205
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.93 E-value=5.5e-24 Score=225.45 Aligned_cols=345 Identities=12% Similarity=0.041 Sum_probs=231.7
Q ss_pred HHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC------------
Q 009517 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------------ 213 (533)
Q Consensus 146 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------------ 213 (533)
+.+...+.. ....|....+..++++++++++.+.+|.+.+.+.+++|+|+++|+..++.+++ +
T Consensus 114 e~l~~~~~~----~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~-~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 114 EWLTSTANT----NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAAR-YKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHCC----CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHH-HHHCTHHHHHCGG
T ss_pred HHHHHHhcc----CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHH-HHhhhhhhhcCcc
Confidence 444455544 35678888889999999999999999977667799999999999999988876 3
Q ss_pred --CCCeEEEcCCcCcchHHHHHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 214 --ENDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 214 --~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
+++.|+++.++|..+..+++..|. +++.++.+. ++.+|+++|+++|++....|..+++|++++++||||.+-+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~ 266 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP 266 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence 467899999999999999999998 899999874 5789999999999886555656899999999999999966
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
+++|+++|++||+++++|++|.+...... .+. .....+. ..| +++.+++|++ +.| ..+|++++ .
T Consensus 267 ---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~-~~~---~~~~g~~--~aD---sv~~~~hK~l-~~p-~g~g~l~~--~ 330 (511)
T 3vp6_A 267 ---IQEIADICEKYNLWLHVDAAWGGGLLMSR-KHR---HKLNGIE--RAN---SVTWNPHKMM-GVL-LQCSAILV--K 330 (511)
T ss_dssp ---HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTG---GGGTTGG--GCS---EEEECTTSTT-CCC-SCCEEEEE--S
T ss_pred ---HHHHHHHHHHcCCEEEEEccchhhHhhCh-hhh---hhccCCc--cCC---EEEECccccc-CCC-cCeEEEEE--e
Confidence 99999999999999999999988655321 111 1111110 123 5567999998 433 66788877 3
Q ss_pred CHHHHHHHHHhhhccc----------------------cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 009517 369 SAEVREQIYKVASVNL----------------------CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (533)
Q Consensus 369 ~~~~~~~l~~~~~~~~----------------------~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (533)
+++++.........+. ....+...++...+ -.+.++++.++..++.
T Consensus 331 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~------------g~~gl~~~~~~~~~~a 398 (511)
T 3vp6_A 331 EKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK------------GTVGFENQINKCLELA 398 (511)
T ss_dssp STTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH------------HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH------------hHHHHHHHHHHHHHHH
Confidence 5555544322110000 01223333333332 1245677888889999
Q ss_pred HHHHHHHhcCCCceEec---CCceeEEecccCCCHHHH------HHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCC
Q 009517 427 KTLEDAFNSLEGITCNK---AEGAMYLFPRIQLPEKAI------KAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497 (533)
Q Consensus 427 ~~l~~~L~~~~g~~~~~---~~gg~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~ 497 (533)
+++.+.|+++||++++. |..++.+|. +. |.+.. ......+ .....+. +.|.++|+.+.. ..+. ..
T Consensus 399 ~~l~~~L~~~pg~~l~~~~~p~~~~v~f~-~~-p~~~~~~~~~~~~~~~l~-~~~~~l~-~~L~~~G~~~~~-~~~~-~~ 472 (511)
T 3vp6_A 399 EYLYAKIKNREEFEMVFNGEPEHTNVCFW-YI-PQSLRGVPDSPQRREKLH-KVAPKIK-ALMMESGTTMVG-YQPQ-GD 472 (511)
T ss_dssp HHHHHHHHSCTTEEESSSSCCSSSCEEEE-EC-CGGGSSCCCCHHHHHHHH-HHHHHHH-HHHHHHTSCEEE-EEEE-TT
T ss_pred HHHHHHHhcCCCEEEEecCCCCeEEEEEE-Ee-CccccccccchhHHHHHH-HHHHHHH-HHHHhcCCEEEE-EEEe-CC
Confidence 99999999999999875 566655542 21 21100 0000000 0011233 445556765443 1111 12
Q ss_pred CCceEEEEec---CCcCcHHHHHHHHHHHHHHHHHHh
Q 009517 498 GTWHFRCTIL---PQEDKIPAIVTRLTDFHKNFMDKF 531 (533)
Q Consensus 498 g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~~~~ 531 (533)
+.+++||+++ .+.++|+.+++.|+++-+.+..++
T Consensus 473 ~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~~~~~ 509 (511)
T 3vp6_A 473 KANFFRMVISNPAATQSDIDFLIEEIERLGQDLHHHH 509 (511)
T ss_dssp EEEEEEECCCCTTCCHHHHHHHHHHHHHHHC------
T ss_pred ceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 3348999983 678899999999998877765543
No 206
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=5.8e-25 Score=225.51 Aligned_cols=213 Identities=13% Similarity=0.099 Sum_probs=160.3
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHhCCeEEE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVP 241 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~g~~~~~ 241 (533)
..+..+||+++|++++ . +++++++++++|+..+++ ++ ++||+|+++.|+|++... .++..|.+++.
T Consensus 54 ~~~~~~lr~~la~~~g------~--~~~i~~~sGt~a~~~al~-~~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~ 123 (393)
T 1n8p_A 54 NPNRENLERAVAALEN------A--QYGLAFSSGSATTATILQ-SL-PQGSHAVSIGDVYGGTHRYFTKVANAHGVETSF 123 (393)
T ss_dssp CHHHHHHHHHHHHHTT------C--SEEEEESCHHHHHHHHHH-TS-CSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEE
T ss_pred ChhHHHHHHHHHHHhC------C--CcEEEECChHHHHHHHHH-Hc-CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence 3457899999999974 2 256666666999999999 77 799999999999986444 34557889888
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEEccccccccc
Q 009517 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE----GLVLLADEVYQENVY 317 (533)
Q Consensus 242 v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~----~~~lI~De~y~~~~~ 317 (533)
++.+ | +++++++++ ++++|++++|+||||.+++ +++|+++|+++ |+++|+||+|..+.+
T Consensus 124 v~~~-------d-~~l~~~i~~------~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 124 TNDL-------L-NDLPQLIKE------NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI 186 (393)
T ss_dssp ESSH-------H-HHHHHHSCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred eCCC-------h-HHHHHhccc------CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccccc
Confidence 8764 6 888888865 7999999999999999998 99999999999 999999999998665
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee-EEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHH
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILAS 395 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri-G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~ 395 (533)
. . + .. + ..+ +++.|+||.+ |++|+|+ ||+++ .++++++.+..... .....++..+.++.
T Consensus 187 ~-~-~----~~----~---~~d---i~~~S~sK~~-g~~G~rigG~~~~--~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 247 (393)
T 1n8p_A 187 S-N-P----LN----F---GAD---IVVHSATKYI-NGHSDVVLGVLAT--NNKPLYERLQFLQNAIGAIPSPFDAWLTH 247 (393)
T ss_dssp C-C-G----GG----G---TCS---EEEEETTTTT-TCSSCCCCEEEEE--SCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred C-C-H----HH----c---CCe---EEEEECcccc-cCCCCceeEEEEe--CCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 2 1 1 11 1 233 8899999998 7789999 99887 24788888876654 33455666666655
Q ss_pred HHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009517 396 LVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEG 438 (533)
Q Consensus 396 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 438 (533)
..++. +....++..++++.+.+.|.+.+.
T Consensus 248 ~~l~~--------------~~~~~~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 248 RGLKT--------------LHLRVRQAALSANKIAEFLAADKE 276 (393)
T ss_dssp HHHTT--------------HHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred hccch--------------HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 55531 233344455666777778877644
No 207
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.93 E-value=5.5e-24 Score=219.92 Aligned_cols=287 Identities=13% Similarity=0.084 Sum_probs=196.4
Q ss_pred cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHhCCeEEEE
Q 009517 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPY 242 (533)
Q Consensus 167 ~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~g~~~~~v 242 (533)
....+|++++|++++ .+..+++++|++|+..++++++ ++||+|++++|+|.++.. .+...|.+++.+
T Consensus 82 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v 152 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLA-RAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV 152 (430)
T ss_dssp HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence 446788888888874 2346666677899999999998 899999999999998877 667889999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCC
Q 009517 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 243 ~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~ 322 (533)
+.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....+.. +
T Consensus 153 ~~~-------d~~~l~~ai~~------~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~--~ 214 (430)
T 3ri6_A 153 DVM-------DSLAVEHACDE------TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE--A 214 (430)
T ss_dssp CTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC--G
T ss_pred CCC-------CHHHHHHhhCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC--h
Confidence 864 79999999976 7999999999999999998 8899999999999999999998543311 1
Q ss_pred cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH------------------HHHHHHhh-h-c
Q 009517 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV------------------REQIYKVA-S-V 382 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~------------------~~~l~~~~-~-~ 382 (533)
..+ ..| +++.|+||.+ |.+|..+|.+++...+..+ +..+.... . .
T Consensus 215 --------~~~---g~d---iv~~S~sK~l-~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~ 279 (430)
T 3ri6_A 215 --------KRL---GVD---IEVLSSTKFI-SGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNL 279 (430)
T ss_dssp --------GGG---TCS---EEEEECCCEE-ETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHH
T ss_pred --------HHc---CCE---EEEECCcccc-cCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhc
Confidence 011 123 7899999999 4456555555442223211 22222211 1 2
Q ss_pred cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-ecCC----------------
Q 009517 383 NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC-NKAE---------------- 445 (533)
Q Consensus 383 ~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~---------------- 445 (533)
....++...+++...+ +.+....++..+++..+.+.|++.|++.. ..|.
T Consensus 280 g~~~~~~~a~l~l~~l--------------~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~ 345 (430)
T 3ri6_A 280 GPSLSPHNAYLQSLGL--------------ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRY 345 (430)
T ss_dssp CCCCCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSS
T ss_pred CCCCCHHHHHHHHhhh--------------hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCC
Confidence 2334444444333322 34455556667888899999998888764 3343
Q ss_pred ceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--------------------CCCCceEEEE
Q 009517 446 GAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--------------------VPGTWHFRCT 505 (533)
Q Consensus 446 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--------------------~~g~~~iRis 505 (533)
||+.+|+.++.+. ....++ ..++..++.+.+|..|.. .-..++||||
T Consensus 346 Gg~~lsf~l~~~~------------~~~~~~-~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRls 412 (430)
T 3ri6_A 346 AGSILTFELESKE------------ASYRFM-DALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLS 412 (430)
T ss_dssp CCSEEEEECSSHH------------HHHHHH-HHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEE
T ss_pred CceEEEEEECCHH------------HHHHHH-HhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEE
Confidence 6746665554111 112222 344556777777876641 0123589999
Q ss_pred ecCCcCcHHHHHHHHHHHH
Q 009517 506 ILPQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 506 ~~~~~e~i~~~~~~l~~~l 524 (533)
++. |+.+.+++.|++++
T Consensus 413 vG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 413 VGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp CCS--SCHHHHHHHHHHHH
T ss_pred ecc--CCHHHHHHHHHHhh
Confidence 985 56788888888776
No 208
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.92 E-value=2.9e-23 Score=211.60 Aligned_cols=316 Identities=14% Similarity=0.121 Sum_probs=211.2
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC-CcccHHHHHHH-HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-ccCCCCe
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH-SQGIKGLRDTI-AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDG 217 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~-~~G~~~lr~ai-a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~~gd~ 217 (533)
++++++++.+.+... . |.+ .....+|++++ |++++ ..+++++++|+++|+..++..+ + ++||+
T Consensus 15 ~~~i~~a~~~~~~~~----~--~~~~~~~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~-~~Gd~ 80 (377)
T 3ju7_A 15 VIEYLDELKEIDASH----I--YTNYGPINQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKR-KKGKY 80 (377)
T ss_dssp GGGGHHHHHHHHHHT----C--CSSSCHHHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSC-TTCCE
T ss_pred cHHHHHHHHHHHHcC----C--cccCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCC-CCcCE
Confidence 577888888888761 2 332 23478999999 98864 1467899999999999999998 6 79999
Q ss_pred EEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC--eeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT--VRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 218 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~--~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
|+++.|+|..+...+...|++++.++++++ +|.+|++++++++... + +++|+ |+||||.+.+ +++|
T Consensus 81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~-----~~~tk~v~---~~~~~G~~~~---~~~i 148 (377)
T 3ju7_A 81 ALMPSFTFPATPLAAIWCGLEPYFIDISID-DWYMDKTVLWDKIEEL-----KEEVAIVV---PYATFGSWMN---LEEY 148 (377)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHHHHH-----GGGEEEEC---CBCGGGBCCC---CHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHHHhcC-----CCCceEEE---EECCCCCccC---HHHH
Confidence 999999999999999999999999999753 7899999999999432 5 88887 7789999988 7888
Q ss_pred HHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecC--CccCCCCCCCeeEEEEEecCCHHHH
Q 009517 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 296 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
.++|+ ||++||+|++|.........+. ... ..+ +.+.|| +|++ + +| +.|++++ .++++.
T Consensus 149 ~~la~-~~~~vi~D~a~a~g~~~~~~~~------g~~----~~d---~~~~S~~~~K~l-~-~g-~gG~~~~--~~~~l~ 209 (377)
T 3ju7_A 149 EELEK-KGVPVVVDAAPGFGLMNGGMHY------GQD----FSG---MIIYSFHATKPF-G-IG-EGGLIYS--KNEEDI 209 (377)
T ss_dssp HHHHH-TTCCBEEECTTCTTCEETTEET------TTT----CSS---EEEEECBTTSSS-C-CB-SCEEEEE--SCHHHH
T ss_pred HHHHh-cCCEEEEECCCccCCeECCEec------cCC----CCc---EEEEECCCCCcC-C-CC-CcEEEEE--CCHHHH
Confidence 99999 9999999999975332111110 000 123 445565 6988 5 35 6788876 378888
Q ss_pred HHHHHhhhc-------------cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-
Q 009517 374 EQIYKVASV-------------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGI- 439 (533)
Q Consensus 374 ~~l~~~~~~-------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~- 439 (533)
+.+..+... .+..+.+.++++...| +.++...++.+++++.+.+.|++++++
T Consensus 210 ~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l--------------~~l~~~~~~~~~~~~~~~~~L~~~~~~~ 275 (377)
T 3ju7_A 210 QRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATM--------------KKWDDKLKERTRISEWYKQLLQSNGLMK 275 (377)
T ss_dssp HHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHH--------------HTHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 888776531 1234445444444433 334455556666777788888877543
Q ss_pred -eEecCCc--eeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCC--CCC-----C--C---------C
Q 009517 440 -TCNKAEG--AMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSG--FGQ-----V--P---------G 498 (533)
Q Consensus 440 -~~~~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~--f~~-----~--~---------g 498 (533)
.+....+ ..+.+.-+..+.. .+.+. +.+.|+++||.+..+.. ... . . .
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 344 (377)
T 3ju7_A 276 KGWQLQKTEAVIQQFMPILCPEE----------VRNKQ-VIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIA 344 (377)
T ss_dssp TTCBCCCCSCBCCSSEEEECCTT----------SCHHH-HHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHH
T ss_pred ccccCCCCCcceEEEEEEEeCCh----------hhHHH-HHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHH
Confidence 2222111 1111111222211 01223 34667889999987651 110 0 0 0
Q ss_pred CceEEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 499 TWHFRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 499 ~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
.+.+||.+. .++++++++++.|++++..
T Consensus 345 ~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 345 KRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp HHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred hCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 237999995 8889999999998887765
No 209
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.92 E-value=2.3e-22 Score=211.71 Aligned_cols=337 Identities=12% Similarity=0.037 Sum_probs=230.7
Q ss_pred HHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCC--------CCEEEcCChHHHHHHHHHHhccC-
Q 009517 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP--------NDIFLTDGASPAVHMMMQLLIRS- 213 (533)
Q Consensus 143 ~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--------~~i~~t~G~~~al~~~~~~l~~~- 213 (533)
.+.+.+...+.. ....|....+..++++++++++.+.+|.+... ...++|+|+++++..++.+++..
T Consensus 94 ~~~~~~~~~~n~----~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~ 169 (481)
T 4e1o_A 94 LLGDMLADAINC----LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNK 169 (481)
T ss_dssp HHHHHHHHHHCC----CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCc----ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHH
Confidence 333444455544 35678888889999999999999998865332 36789999999999988877511
Q ss_pred -----------------CCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 009517 214 -----------------ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276 (533)
Q Consensus 214 -----------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil 276 (533)
+++.|+++.++|..+...+...|.+++.+|+++ ++.+|+++|+++|++....|..+.+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~ 247 (481)
T 4e1o_A 170 ILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDD--NFSLRGEALQKAIEEDKQRGLVPVFVCA 247 (481)
T ss_dssp HHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 467899999999999999999999999999863 6789999999999886555555788888
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCC
Q 009517 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (533)
Q Consensus 277 ~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~ 356 (533)
+.++|+||.+-+ +++|+++|++||+++++|++|.+..+... ... .....+. ..| .+..+++|++++ |
T Consensus 248 ~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~-~~~---~~~~gi~--~aD---si~~~~hK~l~~-p 314 (481)
T 4e1o_A 248 TLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCP-EFR---GFLKGIE--YAD---SFTFNPSKWMMV-H 314 (481)
T ss_dssp EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSG-GGG---GGGTTGG--GCS---EEEECHHHHSSC-C
T ss_pred ecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhCh-hhH---HHhcCcc--cCC---EEEEChHHhcCC-C
Confidence 999999999866 99999999999999999999987644221 111 1111110 123 446789998843 3
Q ss_pred CCeeEEEEEecCCHHHHHHHHHhhhcc--------------------ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHH
Q 009517 357 GKRGGYMEVTGFSAEVREQIYKVASVN--------------------LCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (533)
Q Consensus 357 G~riG~v~~~~~~~~~~~~l~~~~~~~--------------------~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 416 (533)
..+|++++ .+++.+.........+ .....+.+.++...+ -.+.++
T Consensus 315 -~g~g~l~~--~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~------------g~~g~~ 379 (481)
T 4e1o_A 315 -FDCTGFWV--KDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSF------------GVKNLQ 379 (481)
T ss_dssp -SSCEEEEE--SBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHH------------HHHHHH
T ss_pred -CceEEEEE--eCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHh------------HHHHHH
Confidence 45677666 3555432211100000 001233344444333 124467
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCC
Q 009517 417 GILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQV 496 (533)
Q Consensus 417 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~ 496 (533)
++.++..++++++.+.|+++||+++..+....++++++..... ....+..++.++..+.+.|+..
T Consensus 380 ~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~-----------~~~~l~~~L~~~g~~~~~~~~~---- 444 (481)
T 4e1o_A 380 AHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNS-----------LTENVLKEIAKAGRLFLIPATI---- 444 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHH-----------HHHHHHHHHHHHCSSBCEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchH-----------HHHHHHHHHHhCCeEEEEeeEE----
Confidence 7788889999999999999999998765554455555542211 1234445555443355665433
Q ss_pred CCCceEEEEec---CCcCcHHHHHHHHHHHHHHHH
Q 009517 497 PGTWHFRCTIL---PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 497 ~g~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 528 (533)
.|..++|+++. .++++|++++++|+++++++.
T Consensus 445 ~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 445 QDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 23458999975 467899999999999988765
No 210
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.92 E-value=2.4e-24 Score=224.57 Aligned_cols=287 Identities=11% Similarity=0.048 Sum_probs=190.0
Q ss_pred cCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEE
Q 009517 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPY 242 (533)
Q Consensus 163 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v 242 (533)
|.+.....++++.+++ ++ .+ +++++|+|+++++..++++++ ++||+|+++.|+|..+...+...|++++.+
T Consensus 53 ~~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~-~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v 123 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFS-QKKGDILMARNVHKSVLHALDISQQEGHFI 123 (446)
T ss_dssp TSCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTT-TSSSCEEECTTCCHHHHHHHHHHTCCEEEC
T ss_pred cCcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhc-CCCCEEEEecCccHHHHHHHHHcCCeEEEE
Confidence 3444556777777777 53 22 689999999999999999998 799999999999999999999999999999
Q ss_pred ecCCCCC----CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-ccc
Q 009517 243 YLDEATG----WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE-NVY 317 (533)
Q Consensus 243 ~~~~~~~----~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~-~~~ 317 (533)
+...+++ +.+|++.| +.+ ++++|++++ +|+||.+++ +++|+++|++||+++|+||+|.. +.|
T Consensus 124 ~~~~~~~~~~~~~~d~~~l---~~~------~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f 190 (446)
T 2x3l_A 124 ETHQSPLTNHYNKVNLSRL---NND------GHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGL 190 (446)
T ss_dssp EEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTS
T ss_pred eCeeccccCcCCCCCHHHH---cCC------CceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhcc
Confidence 8832223 46788877 333 789999999 566999998 88999999999999999999986 445
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHH--HHHHhhh--ccccCChHHHHH
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE--QIYKVAS--VNLCSNISGQIL 393 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~--~l~~~~~--~~~~~~~~~q~a 393 (533)
.+. + .+... + ..| +++.|+||+++|+ .++||+++ ++++++ .+..... .+.+++....++
T Consensus 191 ~~~-~-~~~~~----~---g~D---i~~~S~~K~l~~~--~g~g~l~~---~~~~i~~~~~~~~~~~~~~~s~~~~~~aa 253 (446)
T 2x3l_A 191 QGF-P-DSTLN----Y---QAD---YVVQSFHKTLPAL--TMGSVLYI---HKNAPYRENIIEYLSYFQTSSPSYLIMAS 253 (446)
T ss_dssp TTS-C-CCGGG----G---TCS---EEEECHHHHSSSC--TTCEEEEE---ETTCTTHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred CCC-C-CChHH----c---CCC---EEEECCccccccc--cccEEEEE---cCCcCCHHHHHHHHHHHcCCCchHHHHHH
Confidence 443 2 22222 2 244 7899999976443 45799998 554433 3322211 223344444333
Q ss_pred HHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCC
Q 009517 394 ASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVP 471 (533)
Q Consensus 394 ~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 471 (533)
+..+++ +.+. .+.+.++.+++++.+++. |+.+..+..+.++|+.++ + . +
T Consensus 254 l~~a~~-----------~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~---~---------~-~ 304 (446)
T 2x3l_A 254 LESAAQ-----------FYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYE---G---------F-T 304 (446)
T ss_dssp HHHHHH-----------HHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECT---T---------S-C
T ss_pred HHHHHH-----------HHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeC---C---------c-C
Confidence 333321 1111 111344444444555444 777776665556776553 1 1 2
Q ss_pred hHHHHHHHHHccceEEE-cCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHH
Q 009517 472 DAFYCRRLLNATGIVLV-PGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 472 ~~~~~~~ll~~~gV~v~-pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
...+.. .|.++||.+. +|. +++|++++ .+++++ +++++|+++++.+
T Consensus 305 ~~~l~~-~L~~~GI~v~~~g~--------~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 305 GHDIQN-WFMNAHIYLELADD--------YQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp HHHHHH-HHHHTTEEESEECS--------SCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred HHHHHH-HHHHCCCEEEecCC--------CEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 334444 4555699997 432 38999997 588899 9999999887543
No 211
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.92 E-value=4.8e-23 Score=211.32 Aligned_cols=284 Identities=14% Similarity=0.072 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH-----HHhCCeEEEEe
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-----ALHGGTLVPYY 243 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~-----~~~g~~~~~v~ 243 (533)
..+|++.++++.+ .+.+++++++++|+..+ ..++ ++||+|+++.|+|++....+ ...|.+++.++
T Consensus 69 ~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~~-~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 69 RFAYERCVAALEG--------GTRAFAFASGMAATSTV-MELL-DAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp HHHHHHHHHHHHT--------CSEEEEESSHHHHHHHH-HTTS-CTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHhC--------CCCEEEecCHHHHHHHH-HHHc-CCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 5678888887764 23677778889999984 5566 79999999999999655443 34699999888
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCc
Q 009517 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (533)
Q Consensus 244 ~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~ 323 (533)
.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|....+.. +
T Consensus 139 ~~-------d~~~l~~~i~~------~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~--~- 199 (400)
T 3nmy_A 139 LT-------DPAAFKAAIRA------DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR--P- 199 (400)
T ss_dssp TT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC--G-
T ss_pred CC-------CHHHHHHHhcc------CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC--h-
Confidence 64 79999999976 7999999999999999998 9999999999999999999997543321 1
Q ss_pred ccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE-EEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCCC
Q 009517 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY-MEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~-v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~~ 401 (533)
+ .+ ..+ +++.|+||.+ +.+|.++|+ +++ ..++++++.+..... .+.+.+++.++++...++
T Consensus 200 -----~--~~---g~d---iv~~S~sK~l-~g~g~~~gG~~vv-~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~-- 262 (400)
T 3nmy_A 200 -----L--SL---GAD---LVVHSATKYL-NGHSDMVGGIAVV-GDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLK-- 262 (400)
T ss_dssp -----G--GG---TCS---EEEEETTTTT-TCSSSCCCEEEEE-CSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHT--
T ss_pred -----h--hc---CCc---EEEecCcccc-CCCCCcceeEEEE-eCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHh--
Confidence 0 11 234 7899999999 447777766 332 247888888877654 556677777777666653
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe-c-----------------CCceeEEecccCCCHHHHHH
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN-K-----------------AEGAMYLFPRIQLPEKAIKA 463 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~-----------------~~gg~~~~~~~~~~~~~~~~ 463 (533)
.+....++..++.+.+.+.|++.|.+..+ . ..|+ .+++.++....
T Consensus 263 ------------~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~-~~~~~l~~~~~---- 325 (400)
T 3nmy_A 263 ------------TLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGG-IVSIVLKGGFD---- 325 (400)
T ss_dssp ------------THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEETTHHH----
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCc-eEEEEeCCcHH----
Confidence 13344556677788888999888776543 1 2234 45544431100
Q ss_pred HHhcCCCChHHHHHHHHHccceEEEcCCCCCC--------------------CCCCceEEEEecCCcCcHHHHHHHHHHH
Q 009517 464 AEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--------------------VPGTWHFRCTILPQEDKIPAIVTRLTDF 523 (533)
Q Consensus 464 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--------------------~~g~~~iRis~~~~~e~i~~~~~~l~~~ 523 (533)
....++ ..++-.++.+..|..+.. .-..+.+|||+++ |+.+.+++.|+++
T Consensus 326 -------~~~~~~-~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl--e~~~dli~dl~~a 395 (400)
T 3nmy_A 326 -------AAKRFC-EKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI--EDLGDLRGDLERA 395 (400)
T ss_dssp -------HHHHHH-HHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred -------HHHHHH-HcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHH
Confidence 012222 333434545555543320 0123589999985 4567788888888
Q ss_pred HH
Q 009517 524 HK 525 (533)
Q Consensus 524 l~ 525 (533)
++
T Consensus 396 l~ 397 (400)
T 3nmy_A 396 LV 397 (400)
T ss_dssp HC
T ss_pred Hh
Confidence 76
No 212
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.92 E-value=7.9e-23 Score=216.31 Aligned_cols=340 Identities=11% Similarity=0.111 Sum_probs=226.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh----cc----
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL----IR---- 212 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l----~~---- 212 (533)
++.+++++.....+. ....|....+..++.+++.+++.+.+|.+ ..+.+++|+|+++|+..++.++ +.
T Consensus 113 ~~~v~~~~~~~~~n~---~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~ 188 (497)
T 2qma_A 113 MPAVAAEAMIAALNQ---SMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSG 188 (497)
T ss_dssp HHHHHHHHHHHHHCC---CTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcc---cccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhcc
Confidence 677777776655442 24456655567888999888888888854 2378999999999999998874 20
Q ss_pred ----CC------CC-eEEEcCCcCcchHHHHHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC
Q 009517 213 ----SE------ND-GILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (533)
Q Consensus 213 ----~~------gd-~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~ 278 (533)
.+ |+ .|+++.+.|..+...+...|. +++.+|+++ ++.+|+++|+++|++....+.++.+|++++
T Consensus 189 ~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~ 266 (497)
T 2qma_A 189 HSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFAIVGTA 266 (497)
T ss_dssp CCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEEEEEEB
T ss_pred cchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceEEEEcC
Confidence 02 45 799999999999999998876 789999864 578999999999987543333355888889
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC
Q 009517 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (533)
Q Consensus 279 p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ 358 (533)
++||||.+.+ +++|+++|++||+++++|++|.++.+... +. .....+. ..| +++.|++|.+ +. ++
T Consensus 267 ~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~--~~---~~~~gi~--~~D---~i~~s~hK~l-~~-p~ 331 (497)
T 2qma_A 267 GTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS--HK---SRLKGVE--RAH---SISVDFHKLF-YQ-TI 331 (497)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST--TG---GGGTTGG--GCS---EEEEETTTTT-CC-CS
T ss_pred CCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc--ch---HhhcCcc--cCC---EEEEcchhcc-CC-Cc
Confidence 9999999877 99999999999999999999998765322 11 1111210 234 5677899988 43 47
Q ss_pred eeEEEEEecCCHHHHHHHHHhhh-ccc----cCC-------------hHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHH
Q 009517 359 RGGYMEVTGFSAEVREQIYKVAS-VNL----CSN-------------ISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (533)
Q Consensus 359 riG~v~~~~~~~~~~~~l~~~~~-~~~----~~~-------------~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~ 420 (533)
++|++++ .++..++.+..... ... .++ .+.+.++...+. .+.++.+.+
T Consensus 332 ~~G~l~~--~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg------------~~g~~~~~~ 397 (497)
T 2qma_A 332 SCGALLV--NDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVG------------PKALGDMYD 397 (497)
T ss_dssp SCEEEEE--SCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTC------------HHHHHHHHH
T ss_pred ceEEEEE--eCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhC------------HHHHHHHHH
Confidence 9999987 24443332211000 000 011 122223333331 133566777
Q ss_pred HHHHHHHHHHHHHhcCCCceEe-cCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCC
Q 009517 421 SLARRAKTLEDAFNSLEGITCN-KAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGT 499 (533)
Q Consensus 421 ~~~~~~~~l~~~L~~~~g~~~~-~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~ 499 (533)
+..++++++.+.|+++++++++ +++++++.| ++.......+. ....+ ...+.+.|+.+.++..+. +.
T Consensus 398 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~-------l~~~l-~~~l~~~G~~~~~~~~~~---g~ 465 (497)
T 2qma_A 398 HLLAQTLEVADMIRTNDQFELLAEPSLSTVLF-RATHETADLDE-------LNKAL-RLEALTRGIAVLGETIVD---GK 465 (497)
T ss_dssp HHHHHHHHHHHHHHTCTTEEECSCCSSSEEEE-EECCSSSCHHH-------HHHHH-HHHHHHHTSCBCEEEEET---TE
T ss_pred HHHHHHHHHHHHHhhCCCeEEEcCCCceEEEE-EEcCCccCHHH-------HHHHH-HHHHHhCCCEEEEeeEEC---CE
Confidence 8888999999999998898875 566665544 33311000000 01122 244556798887654432 34
Q ss_pred ceEEEEe-c--CCcCcHHHHHHHHHHHHHHH
Q 009517 500 WHFRCTI-L--PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 500 ~~iRis~-~--~~~e~i~~~~~~l~~~l~~~ 527 (533)
+++||++ . .++++|++++++|+++++++
T Consensus 466 ~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 466 TALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 4899998 3 78899999999999887653
No 213
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.91 E-value=1.4e-23 Score=216.25 Aligned_cols=213 Identities=16% Similarity=0.117 Sum_probs=159.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEEEec
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYL 244 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~ 244 (533)
..+|++.+|++++ .+++++++|+++|+..+++.++ ++||+|+++.|.|.+....+ +..|+++..++.
T Consensus 84 ~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 84 HFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFI-EQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp HHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTC-CTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence 6778999988874 2457778899999999999888 79999999999999877554 346999988864
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEccccccccccCCCC
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK--EGLVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~ 322 (533)
+ |+++++++|++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|....+ . .+
T Consensus 155 ~-------d~~~le~ai~~------~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~-~p 216 (415)
T 2fq6_A 155 L-------IGADIVKHLQP------NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F-KA 216 (415)
T ss_dssp T-------CGGGGGGGCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S-CG
T ss_pred C-------CHHHHHHhhcc------CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C-Cc
Confidence 3 78899998876 7999999999999999998 8999999999 9999999999986432 1 11
Q ss_pred cccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCe-eEEEEEecCCHHHHHHHHHhhh-ccccCChHHHHHHHHHcCC
Q 009517 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (533)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~r-iG~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~~L~~ 400 (533)
+ ++ ..| +++.|++|.+ |.+|.+ +||+++ ++++++.+..... .....++..++++...+
T Consensus 217 ---~-----~~---g~D---iv~~S~sK~l-g~~g~~~~G~l~~---~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-- 276 (415)
T 2fq6_A 217 ---L-----DF---GID---VSIQAATKYL-VGHSDAMIGTAVC---NARCWEQLRENAYLMGQMVDADTAYITSRGL-- 276 (415)
T ss_dssp ---G-----GG---TCS---EEEEETTTTT-TCSSSCCCEEEEE---CTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH--
T ss_pred ---c-----cc---CCe---EEEEeCcccc-CCCCCceEEEEEe---CHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh--
Confidence 1 11 234 7899999999 667755 699887 6677777766544 23334455444433333
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q 009517 401 PKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGIT 440 (533)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 440 (533)
+.+....++..++...+.+.|.+.|.+.
T Consensus 277 ------------~~l~~r~~~~~~n~~~l~~~L~~~~~v~ 304 (415)
T 2fq6_A 277 ------------RTLGVRLRQHHESSLKVAEWLAEHPQVA 304 (415)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 3334455556677778888888765543
No 214
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.91 E-value=2.4e-23 Score=217.84 Aligned_cols=306 Identities=11% Similarity=0.078 Sum_probs=205.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHhccC--CCCeEEEcCCcCcchHHHHHHhCCeEEEEecC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIRS--ENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~~~~l~~~--~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~ 245 (533)
..++.+++.+++.+.+|.+ ++ +++|+|++ .++..++..+. . +++.|+++++.|..+...++..|++++.+++.
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~-~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~ 206 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAAR-KKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHH-HHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHH-HhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEe
Confidence 5567777777777777743 44 99999999 46655666554 3 67789999999999999999999999998874
Q ss_pred C-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 246 E-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 246 ~-~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
+ +.++.+|+++|+++|++.... .++.+|++++|+||||.+.+ +++|+++|+++|+++++|++|..+.++ . .
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~~-~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g-~---~ 278 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIEL-GNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNY-Y---L 278 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHHT-TCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH-H---H
T ss_pred ccCCCCCcCHHHHHHHHHHHhhC-CCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHH-h---h
Confidence 2 246789999999999321111 16778888999999999987 899999999999999999999875541 1 1
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhcc-ccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN-LCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~-~~~~~~~q~a~~~~L~~~~~ 403 (533)
+ .....+.+ ..| +++.|++|.+. +++++||+++ .++++++.+....... ...+.+.+.++...+
T Consensus 279 ~--~~~~~~~~-~~D---~~~~s~hK~~~--~p~g~G~l~~--~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l----- 343 (456)
T 2z67_A 279 E--KLKKAFKY-RVD---AVVSSSDKNLL--TPIGGGLVYS--TDAEFIKEISLSYPGRASATPVVNTLVSLLSM----- 343 (456)
T ss_dssp H--HHHHHHTS-CCS---EEEEEHHHHHC--CCSSCEEEEE--SCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHH-----
T ss_pred H--HHHHhhCC-CCC---EEEEcCCCCcC--CCCCeEEEEE--cCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHH-----
Confidence 1 11111211 134 56789999753 4689999997 3577777764432211 112233333333332
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHH
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLL 480 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 480 (533)
-.+.++++.+++.++++++.+.|++++ |+.+..++ +++ ++++..+. ....+... |
T Consensus 344 -------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~-~~v-~~~~~~~~------------~~~~l~~~-L 401 (456)
T 2z67_A 344 -------GSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE-SPI-ASCISVNS------------DPVEIAAK-L 401 (456)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC-CSS-EEEEECSS------------CHHHHHHH-H
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC-CeE-EEEEeccc------------HHHHHHHH-H
Confidence 123456778888999999999998875 77777777 443 33442111 01233334 4
Q ss_pred Hccce---EEE------cCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHHH
Q 009517 481 NATGI---VLV------PGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDFH 524 (533)
Q Consensus 481 ~~~gV---~v~------pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l 524 (533)
.++|| -+. +|..|... ..+++|+|++ .++++|++++++|++++
T Consensus 402 ~~~gi~~~rv~~~~g~f~G~~~~~~-~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 402 YNLRVTGPRGIKKTDHFGNCYLGTY-THDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp HHTTEESCEEECTTCHHHHTCSSCC-SCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred HHcCCCcceEEeecCcccccccccc-CcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 45664 444 24444321 2349999997 78999999999998764
No 215
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.91 E-value=6e-22 Score=207.98 Aligned_cols=324 Identities=11% Similarity=0.013 Sum_probs=221.7
Q ss_pred ccccCCCcccHHHHHHHHHHHHhhcCCCCCC-------CCEEEcCChHHHHHHHHHHhccC------------------C
Q 009517 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADP-------NDIFLTDGASPAVHMMMQLLIRS------------------E 214 (533)
Q Consensus 160 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-------~~i~~t~G~~~al~~~~~~l~~~------------------~ 214 (533)
...|....+..+|++++++++.+.+|.+... ...++|+|+++++..++.+++.. +
T Consensus 102 ~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 181 (475)
T 3k40_A 102 GFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILG 181 (475)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred ccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccC
Confidence 4568778889999999999999998865321 36899999999999888876310 2
Q ss_pred CCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 215 NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 215 gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
++.|+++.++|..+...+...|++++.+|+++ ++ +|+++|+++|++....+..+.+|+++.++|+||.+-+ +++
T Consensus 182 ~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~ 255 (475)
T 3k40_A 182 KLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDE 255 (475)
T ss_dssp HEEEEEETTSCHHHHHHHHHHTCEEEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHH
T ss_pred CeEEEECCCchHHHHHHHHHcCCceEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHH
Confidence 36799999999999999999999999999874 45 9999999999986555555788888999999999976 999
Q ss_pred HHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH-
Q 009517 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR- 373 (533)
Q Consensus 295 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~- 373 (533)
|+++|++||+++++|++|.+..+... ... .....+. ..| .+..+++|++++ ...+|++++ .+++.+
T Consensus 256 I~~la~~~~~~lhvD~A~~~~~~~~~-~~~---~~~~gi~--~~D---s~~~~~hK~l~~--p~g~g~l~~--~~~~~l~ 322 (475)
T 3k40_A 256 CGPVGNKHNLWIHVDAAYAGSAFICP-EYR---HLMKGIE--SAD---SFNFNPHKWMLV--NFDCSAMWL--KDPSWVV 322 (475)
T ss_dssp HHHHHHHTTCEEEEECTTGGGGGGSG-GGG---GGGTTGG--GCS---EEEECHHHHSSC--CSSCEEEEE--SSGGGC-
T ss_pred HHHHHHHhCCeEEEeHHhHHHHHhCH-hhH---HHhcCcc--cCC---EEEECchhccCC--CCceEEEEE--eCHHHHH
Confidence 99999999999999999987543221 111 1111110 123 557889998843 355777776 244332
Q ss_pred HHHHHh---h-hc-----------cc-cC---ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 374 EQIYKV---A-SV-----------NL-CS---NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 374 ~~l~~~---~-~~-----------~~-~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+.+... . .. +. ++ ..+.+.++...+ -.+.++++.++..++++++.+.|+
T Consensus 323 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~------------g~~g~~~~~~~~~~~a~~l~~~L~ 390 (475)
T 3k40_A 323 NAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLY------------GVENLQAHIRRHCNFAKQFGDLCV 390 (475)
T ss_dssp --------------------------CCCGGGTHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHH------------hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222110 0 00 00 00 122333333322 123457778888999999999999
Q ss_pred cCCCceEecCCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---CCcC
Q 009517 435 SLEGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL---PQED 511 (533)
Q Consensus 435 ~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~---~~~e 511 (533)
++||+.+..+.....+++++..... ....+..++.++.++.+.|+..+ |..++|+++. .+++
T Consensus 391 ~~~g~~l~~~~~~~iv~f~~~~~~~-----------~~~~l~~~L~~~g~~~~~~~~~~----g~~~lR~~~~~~~tt~~ 455 (475)
T 3k40_A 391 ADSRFELAAEINMGLVCFRLKGSNE-----------RNEALLKRINGRGHIHLVPAKIK----DVYFLRMAICSRFTQSE 455 (475)
T ss_dssp HSTTEEESSCCBTTEEEEEESSCHH-----------HHHHHHHHHHHHTSCBCEEEEET----TEEEEEEECCCTTCCHH
T ss_pred cCCCEEEecCCceEEEEEEeCCchH-----------HHHHHHHHHHhCCcEEEEeeEEC----CEEEEEEEeCCCCCCHH
Confidence 9999998765444444444432111 12344555555544566665433 3458999985 4788
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 009517 512 KIPAIVTRLTDFHKNFMD 529 (533)
Q Consensus 512 ~i~~~~~~l~~~l~~~~~ 529 (533)
+|++++++|+++++++.+
T Consensus 456 di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 456 DMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999988764
No 216
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.91 E-value=2.6e-22 Score=205.68 Aligned_cols=310 Identities=13% Similarity=0.107 Sum_probs=209.1
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHh-------cc
Q 009517 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-------IR 212 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-------~~ 212 (533)
+++++++++.+.+.. ..|.+..+..+++++++++++ . ++++++++|++|+..+++.+ .
T Consensus 13 ~~~~~~~a~~~~~~~------~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sGt~a~~~al~~~~~~~~~~~- 77 (390)
T 3b8x_A 13 WDDLEYKAIQSVLDS------KMFTMGEYVKQYETQFAKTFG------S--KYAVMVSSGSTANLLMIAALFFTKKPRL- 77 (390)
T ss_dssp CCHHHHHHHHHHHHH------TCCSSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTSSSSCSC-
T ss_pred CCHHHHHHHHHHHHc------CCCCCChHHHHHHHHHHHHHC------C--CcEEEECCHHHHHHHHHHHHHhhhhcCC-
Confidence 388999999888875 135567778999999999985 2 25777777889999999998 5
Q ss_pred CCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHH
Q 009517 213 SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l 292 (533)
.+||+|+++.|+|+.+...+...|++++.++++++ ++.+|+++|++++++ ++++|+++| ++|...+ +
T Consensus 78 ~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~---~~g~~~~---~ 144 (390)
T 3b8x_A 78 KKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTD------STKAILTVN---LLGNPNN---F 144 (390)
T ss_dssp CTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCT------TEEEEEEEC---GGGCCCC---H
T ss_pred CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCc------CCeEEEEEC---CccChhh---H
Confidence 78999999999999999999999999999999864 578999999999976 799999875 4555545 9
Q ss_pred HHHHHHHHHcCCEEEEcccccc-ccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHH
Q 009517 293 RAIVDFCKKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (533)
Q Consensus 293 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~ 371 (533)
++|.++|+++|+++|+|++|.. ..+.+. . + .. ..+.. .+....+|.+ + +| +.|++++ .+++
T Consensus 145 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~------~--g~---~~~~~-~~s~~~~k~~-~-~g-~gG~~~~--~~~~ 206 (390)
T 3b8x_A 145 DEINKIIGGRDIILLEDNCESMGATFNNK-C------A--GT---FGLMG-TFSSFYSNHI-A-TM-EGGCIVT--DDEE 206 (390)
T ss_dssp HHHHHHHTTSCCEEEEECTTCTTCEETTE-E------T--TS---SSSEE-EEECCTTSSS-C-SS-SCEEEEE--SCHH
T ss_pred HHHHHHHHHcCCEEEEECcCcccCEECCc-c------c--cc---ccceE-EEEccCCCCC-c-cC-CceEEEe--CCHH
Confidence 9999999999999999999984 333211 0 0 00 12311 1111234555 2 23 4589887 2346
Q ss_pred HHHHHHHhhhcc------------------------------c--cCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHH
Q 009517 372 VREQIYKVASVN------------------------------L--CSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (533)
Q Consensus 372 ~~~~l~~~~~~~------------------------------~--~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 419 (533)
+.+.+....... + ..+.+.++++...| +.+++..
T Consensus 207 l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--------------~~l~~~~ 272 (390)
T 3b8x_A 207 IYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL--------------KKLPRFI 272 (390)
T ss_dssp HHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH--------------HHHHHHH
T ss_pred HHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH--------------HHHHHHH
Confidence 777666543210 1 13344444443333 3455677
Q ss_pred HHHHHHHHHHHHHHhcCCCceEecC--CceeE-EecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEc---CCCC
Q 009517 420 SSLARRAKTLEDAFNSLEGITCNKA--EGAMY-LFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVP---GSGF 493 (533)
Q Consensus 420 ~~~~~~~~~l~~~L~~~~g~~~~~~--~gg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p---g~~f 493 (533)
++.+++++++.+.|+++||+.+..+ ..+++ +++.++.+. +. +...+ .+.|.++||.+.+ |..+
T Consensus 273 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~-~~~~l-~~~L~~~gI~v~~~~~~~~~ 341 (390)
T 3b8x_A 273 SVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDS---------GV-IRKQL-VENLNSAGIECRPIVTGNFL 341 (390)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTS---------CC-CHHHH-HHHHHHTTBCCBCSTTSSGG
T ss_pred HHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcC---------cc-cHHHH-HHHHHHCCCCeeeecCCchh
Confidence 7778888999999998888877653 23332 333333110 01 12333 3556678999987 3221
Q ss_pred CC-CC----C--------------CceEEEEec--CCcCcHHHHHHHH
Q 009517 494 GQ-VP----G--------------TWHFRCTIL--PQEDKIPAIVTRL 520 (533)
Q Consensus 494 ~~-~~----g--------------~~~iRis~~--~~~e~i~~~~~~l 520 (533)
.. +. + .+.|||++. .++++++++++.|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 342 KNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp GCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred hcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 11 00 0 126999995 8888999888775
No 217
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.91 E-value=4.8e-22 Score=207.68 Aligned_cols=329 Identities=13% Similarity=0.071 Sum_probs=204.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCC------CcccHHHHHHHHHHHHhhcCCCCCCCC---EEEcCChHHHHHHHHHHhc
Q 009517 141 SADSIERAWQILDQIPGRATGAYSH------SQGIKGLRDTIAAGIEARDGFPADPND---IFLTDGASPAVHMMMQLLI 211 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~~---i~~t~G~~~al~~~~~~l~ 211 (533)
++.|++++...+.+... .+|+. ..-..+|++...+++.+.+| .+.+. .+++++|++|+..++.+++
T Consensus 67 ~~~V~eA~~~~l~~~y~---~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~~sGt~An~~al~al~ 141 (490)
T 2a7v_A 67 SRAALEALGSCLNNKYS---EGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQPYSGSPANLAVYTALL 141 (490)
T ss_dssp CHHHHHHHTSGGGTCCC---CC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCCSSHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHcCCCc---cCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeCCchHHHHHHHHHHHc
Confidence 79999998887765321 22332 11134677555566666666 33432 3445678999999999998
Q ss_pred cCCCCeEEEcCCcCcchHH--------HHHHhCCeE--EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 009517 212 RSENDGILCPIPQYPLYSA--------SIALHGGTL--VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (533)
Q Consensus 212 ~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~--~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~N 281 (533)
+|||+|+++++.|.++.. .+...|..+ ++++++++ ++.+|+++|+++++.. ++++|+++.++|
T Consensus 142 -~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~-~~~iD~d~le~~l~~~-----~~klIi~~~s~~ 214 (490)
T 2a7v_A 142 -QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAY 214 (490)
T ss_dssp -CSCEECCC-------------------------------CCBCTT-TCSBCHHHHHHHHHHH-----CCSEEEECCSSC
T ss_pred -CCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccc-cCCcCHHHHHHHHhhc-----CCcEEEEcCCCC
Confidence 899999999999876431 233456543 44444433 5789999999999865 688898888999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccccc-cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCee
Q 009517 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (533)
Q Consensus 282 PtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~ri 360 (533)
|+. .+ +++|+++|++||+++++|+++. ++.+.|..+ .++ . ..| +++.|+||+| + |.|.
T Consensus 215 ~~~--~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~-~~~----~-----~aD---iv~~S~hK~l-~--Gp~G 273 (490)
T 2a7v_A 215 ARL--ID---YARMREVCDEVKAHLLADMAHISGLVAAKVIP-SPF----K-----HAD---IVTTTTHKTL-R--GARS 273 (490)
T ss_dssp CSC--CC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC-CGG----G-----TCS---EEEEESSGGG-C--SCSC
T ss_pred CCc--cc---HHHHHHHHHHcCCEEEEccccccccccCCcCC-CCC----C-----CCC---EEEECCcccC-c--cccc
Confidence 863 34 8999999999999999999964 555444211 111 1 134 7789999988 3 7888
Q ss_pred EEEEEecCCH---------------HHHHHHHHhhh-cc-ccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHH
Q 009517 361 GYMEVTGFSA---------------EVREQIYKVAS-VN-LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLA 423 (533)
Q Consensus 361 G~v~~~~~~~---------------~~~~~l~~~~~-~~-~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (533)
|++++ ++ ++.+.+.+... .. .+++....+++..++.. ...++.++..+++.
T Consensus 274 G~i~~---~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~---------~~~~~~~~~~~~~~ 341 (490)
T 2a7v_A 274 GLIFY---RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ---------ACTPMFREYSLQVL 341 (490)
T ss_dssp EEEEE---ECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHH---------HHSHHHHHHHHHHH
T ss_pred hheee---ccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH---------HhhhhHHHHHHHHH
Confidence 99998 33 35555655432 22 23444444443434320 01123355667788
Q ss_pred HHHHHHHHHHhcCCCceEec-CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCC--CCCCc
Q 009517 424 RRAKTLEDAFNSLEGITCNK-AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQ--VPGTW 500 (533)
Q Consensus 424 ~~~~~l~~~L~~~~g~~~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~g~~ 500 (533)
+++++|.+.|.+. |+.++. +....++|+++... +. +... +.+.|++.||.+..+..++. +....
T Consensus 342 ~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~----------g~-~~~~-~~~~L~~~GI~v~~~~~p~d~~p~~~~ 408 (490)
T 2a7v_A 342 KNARAMADALLER-GYSLVSGGTDNHLVLVDLRPK----------GL-DGAR-AERVLELVSITANKNTCPGDRSAITPG 408 (490)
T ss_dssp HHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTT----------TC-CHHH-HHHHHHHTTEECEEECCTTCCCSSSCS
T ss_pred HHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCC----------CC-CHHH-HHHHHHhCCeEEecCccCCCCCCCCCC
Confidence 8899999999998 998875 34456778766521 11 1222 45677889999986554442 11234
Q ss_pred eEEEEec------CCcCcHHHHHHHHHHHHHHH
Q 009517 501 HFRCTIL------PQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 501 ~iRis~~------~~~e~i~~~~~~l~~~l~~~ 527 (533)
.|||+.. .++++++++++.|.++++..
T Consensus 409 ~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 409 GLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp EEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 7999772 57889999999999988743
No 218
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.91 E-value=2.8e-23 Score=216.25 Aligned_cols=293 Identities=16% Similarity=0.149 Sum_probs=189.6
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH----HhCCeEEE
Q 009517 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVP 241 (533)
Q Consensus 166 ~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~----~~g~~~~~ 241 (533)
..|..++.+++.+.+.+.+| .++++|++++|++.+++.+..++..++||+|+++.++|+.+...++ ..|++++.
T Consensus 103 ~~g~~~~~~~~~~~la~~~g--~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAG--LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHHHHHHHHHHHhC--CCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence 45666666666666666666 4567899999999444443333221589999999999999876654 47999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccc-cccccccCC
Q 009517 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEV-YQENVYVPE 320 (533)
Q Consensus 242 v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~-y~~~~~~~~ 320 (533)
++.. ++.+|+++ |++ ++++|++++| ||||.+.+ +++|+++|+++|+++|+|.. .+ ++.
T Consensus 181 v~~~---~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a---~g~- 239 (438)
T 1wyu_A 181 LPLE---GGRTPLPE----VGE------EVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLS---LGV- 239 (438)
T ss_dssp ECCB---TTBCCCCC----CCT------TEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTG---GGT-
T ss_pred EcCc---CCccCHHH----hCC------CeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhh---ccC-
Confidence 9872 34677766 433 7999999999 99999987 99999999999999995522 11 111
Q ss_pred CCcccHHHHHhhcCCCCCCceEEEEecCCccCC---CCCCCeeEEEEEecCCHHHHHHHHHh------------------
Q 009517 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY---GECGKRGGYMEVTGFSAEVREQIYKV------------------ 379 (533)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~---gl~G~riG~v~~~~~~~~~~~~l~~~------------------ 379 (533)
.. .... + ..| +++.| +|.|+ ++.|.++||+++ ++++++.+...
T Consensus 240 ~~--~~~~----~---g~D---~~~~s-~kk~~~~~~~~Gp~~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~l 303 (438)
T 1wyu_A 240 LK--PPGA----Y---GAD---IAVGD-GQSLGLPMGFGGPHFGFLAT---KKAFVRQLPGRLVSETVDVEGRRGFILTL 303 (438)
T ss_dssp BC--CHHH----H---TCS---EEEEE-CTTTTCCCGGGCSCCEEEEE---CGGGGGGCCSCCEEEEEBTTSCEEEEECC
T ss_pred cC--CCcc----C---CCC---EEEEC-CcccCCCccCCCCCeeEEEE---cHHHHHhCCCceeccccccCCCcceeeec
Confidence 01 1111 2 234 44555 55541 355779999998 77766554210
Q ss_pred ---------hhccccC---ChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecCCce
Q 009517 380 ---------ASVNLCS---NISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGA 447 (533)
Q Consensus 380 ---------~~~~~~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~gg 447 (533)
...+++. +.+...++...+. .. -.+.++++.+++.++++++.+.|++++|+++..+. .
T Consensus 304 ~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~-------~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~ 373 (438)
T 1wyu_A 304 QAREQYIRRAKAKSNITTNAQLTALMGAMYLA-------AL--GPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-P 373 (438)
T ss_dssp GGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHH-------HH--HHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-S
T ss_pred cccccccchhcccCCccchHHHHHHHHHHHHH-------Hh--CHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-C
Confidence 0112222 1222221221121 00 11235678888899999999999999899887664 3
Q ss_pred eEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEE--EcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHHHH
Q 009517 448 MYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVL--VPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLTDF 523 (533)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v--~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~~~ 523 (533)
+|.++.+..+. +...++.++ .++||.+ .+|..|+ .+++|||+. .+++++++++++|+++
T Consensus 374 ~~~~~~~~~~~------------~~~~~~~~L-~~~gi~v~~~~~~~~~----~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 374 FFNEFALALPK------------DPEAVRRAL-AERGFHGATPVPREYG----ENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp BCSEEEEECSS------------CHHHHHHHH-HHTTCCCCEECCTTSC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCC------------CHHHHHHHH-HHCCceeccccccccC----CCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 33332233221 234445554 4579999 7777664 238999997 7888999999999876
Q ss_pred H
Q 009517 524 H 524 (533)
Q Consensus 524 l 524 (533)
+
T Consensus 437 l 437 (438)
T 1wyu_A 437 L 437 (438)
T ss_dssp C
T ss_pred h
Confidence 4
No 219
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.91 E-value=1e-23 Score=218.49 Aligned_cols=372 Identities=12% Similarity=0.059 Sum_probs=235.0
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ +||+..|.... ..+++ ++++++++.+++.+.
T Consensus 49 ~i~~a~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~q~~~~ 96 (456)
T 4atq_A 49 YVEDADGGIIRDVDGNS------FIDLGSGIAVT----------------------SVGAS----DPAVVAAVQEAAAHF 96 (456)
T ss_dssp CEEEEETTEEEETTSCE------EEESSHHHHTC----------------------TTCTT----CHHHHHHHHHHHHHC
T ss_pred eEEeeecCEEEeCCCCE------EEEccccHHHH----------------------hcCCC----CHHHHHHHHHHHhhc
Confidence 45667777777778877 77775553211 11122 689999999999874
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCC-CCeEEEcCCcCcchHHHHHH
Q 009517 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE-NDGILCPIPQYPLYSASIAL 234 (533)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~-gd~Vlv~~p~~~~~~~~~~~ 234 (533)
.. ....+.+.....+|-+.+++..- + -..+.++++++|+||++.+++..+... ..+|+....+|++....+..
T Consensus 97 ~~-~~~~~~~~~~~~~lae~L~~~~p---~--~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als 170 (456)
T 4atq_A 97 TH-TCFMVTPYEGYVAVTEQLNRLTP---G--DHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMA 170 (456)
T ss_dssp SC-CTTTTSCCHHHHHHHHHHHHHSS---C--SSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHH
T ss_pred cC-cccCccCcHHHHHHHHHHHHhCC---C--CCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccc
Confidence 32 11223333334455555544431 0 124579999999999999999875323 37899999999997654433
Q ss_pred hC--------------CeEEEEecCCC----CCCCCCHHHHHHHHHHHH--hcCCCeeEEEEeCCCCCCcc-CCCHHHHH
Q 009517 235 HG--------------GTLVPYYLDEA----TGWGLETSEVKKQLEAAK--AKGITVRALVVINPGNPTGQ-VLAEENQR 293 (533)
Q Consensus 235 ~g--------------~~~~~v~~~~~----~~~~ld~~~l~~~i~~~~--~~g~~~~~iil~~p~NPtG~-~~s~~~l~ 293 (533)
.. ..+..+|.... ....-+.+.+++.++... ..+.++.+||++..+.-.|. .++++.++
T Consensus 171 ~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~ 250 (456)
T 4atq_A 171 LTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLP 250 (456)
T ss_dssp HCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHH
T ss_pred cccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhH
Confidence 21 12334443211 000123444444443321 12236888888876766776 56778899
Q ss_pred HHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHH
Q 009517 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~ 373 (533)
+|.++|++||+++|+||++++|...|. +.. .+..++.|| +.+|+|.++ .|+++|.+++ .++++
T Consensus 251 ~lr~lc~~~gillI~DEV~tG~GRtG~--~~a-----~e~~gv~PD-----ivt~gK~lg--gg~P~~av~~---~~~i~ 313 (456)
T 4atq_A 251 ALSEWAKEKGIVFIADEVQSGFCRTGE--WFA-----VDHEGVVPD-----IITMAKGIA--GGLPLSAITG---RADLL 313 (456)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSS--SSG-----GGGTTCCCS-----EEEECGGGG--TTSSCEEEEE---EHHHH
T ss_pred HHHHHHhhcCCceEecccccccCCccc--ccc-----ccccCCCCc-----hhhhhhccc--CcCCceeeEe---cHHHH
Confidence 999999999999999999999876664 332 222334788 667899994 5899999998 88988
Q ss_pred HHHHHhhh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCceEec
Q 009517 374 EQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSL---------EGITCNK 443 (533)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~ 443 (533)
+.+..... .|++.++++++++.+.|+ ..+ .+.+.++.++..+++.+.|+++ +-+.-++
T Consensus 314 ~~~~~~~~~~Tf~gnpla~aaala~L~-----------~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VR 381 (456)
T 4atq_A 314 DAVHPGGLGGTYGGNPVACAAALAAID-----------TME-QHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIR 381 (456)
T ss_dssp TTSCTTSSCCSSSSCHHHHHHHHHHHH-----------HHH-HTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEE
T ss_pred hcccccCCCCCCCCChHHHHhhHHHHH-----------HHh-hccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEee
Confidence 87765543 789999999999999884 111 1234445555555555555443 2244466
Q ss_pred CCceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec--CCcCcHHHHHHHHH
Q 009517 444 AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--PQEDKIPAIVTRLT 521 (533)
Q Consensus 444 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~~~~l~ 521 (533)
..|.|+.+ .+..+... .........++ ..+.++||++.++..++ +.|||++. +++++|++++++|+
T Consensus 382 G~Gl~~gi-el~~~~~~-----~~~~~~~~~v~-~~~~~~Gvl~~~~g~~~-----~~irl~PpL~it~~~id~~l~~l~ 449 (456)
T 4atq_A 382 GRGAMLAI-ELVQPGSK-----EPNAELTKAVA-AACLKEGVIILTCGTYG-----NVIRLLPPLVISDELLIDGLEVLA 449 (456)
T ss_dssp EETTEEEE-EEBCTTSC-----CBCHHHHHHHH-HHHHHTTEECEEECTTS-----CEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ecceEEEE-EEecCCCC-----CcCHHHHHHHH-HHHHHCCCEEEecCCCC-----CEEEEECCCCCCHHHHHHHHHHHH
Confidence 77765543 33222100 00000012233 44556899998754333 28999985 79999999999999
Q ss_pred HHHHH
Q 009517 522 DFHKN 526 (533)
Q Consensus 522 ~~l~~ 526 (533)
++++.
T Consensus 450 ~al~a 454 (456)
T 4atq_A 450 AAIKA 454 (456)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 220
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=3.1e-22 Score=207.12 Aligned_cols=227 Identities=15% Similarity=0.073 Sum_probs=161.6
Q ss_pred cccCCCc--ccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HH
Q 009517 161 GAYSHSQ--GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----AL 234 (533)
Q Consensus 161 ~~Y~~~~--G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~ 234 (533)
+.|.... ...+|+++++++++. +..++++++++|+..+++.++ .+||+|+++.++|+++...+ ..
T Consensus 50 ~~y~~~~~~~~~~l~~~la~~~g~--------~~~v~~~sGt~A~~~~l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~ 120 (421)
T 2ctz_A 50 NIYSRIMNPTVDVLEKRLAALEGG--------KAALATASGHAAQFLALTTLA-QAGDNIVSTPNLYGGTFNQFKVTLKR 120 (421)
T ss_dssp GSCBTTBCHHHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHHHC-CTTCEEEECSCCCHHHHHHHHTHHHH
T ss_pred CcccCCCChHHHHHHHHHHHHhCC--------CceEEecCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHH
Confidence 4455332 357899999998752 234555556999999999987 79999999999999887765 67
Q ss_pred hCCeEEEE-ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 009517 235 HGGTLVPY-YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (533)
Q Consensus 235 ~g~~~~~v-~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~ 313 (533)
.|++++.+ +.+ |+++++++|++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.
T Consensus 121 ~g~~~~~~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~ 184 (421)
T 2ctz_A 121 LGIEVRFTSREE-------RPEEFLALTDE------KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFG 184 (421)
T ss_dssp TTCEEEECCTTC-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred cCCEEEEECCCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcc
Confidence 89999888 643 79999999976 7999999999999999999 9999999999999999999994
Q ss_pred cccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHH----HHHHHHh----------
Q 009517 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV----REQIYKV---------- 379 (533)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~----~~~l~~~---------- 379 (533)
.+.+.+. + + .+ ..| +++.|++|.+ +.+|.|+|++++...+.++ .+.+...
T Consensus 185 ~~g~~~~-~---~-----~~---~~D---i~~~s~~K~l-~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~ 248 (421)
T 2ctz_A 185 MGGYLLR-P---L-----AW---GAA---LVTHSLTKWV-GGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLT 248 (421)
T ss_dssp GGGTSCC-G---G-----GG---TCS---EEEEETTTTT-TCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHH
T ss_pred cccccCC-c---c-----cc---CCe---EEEECCcccc-cCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhh
Confidence 3333221 1 1 11 245 7889999999 6689999998874212111 1122110
Q ss_pred -----------------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEe
Q 009517 380 -----------------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCN 442 (533)
Q Consensus 380 -----------------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 442 (533)
.......+++.++++...++ .+....++..++.+.+.+.|.+.|++..+
T Consensus 249 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~--------------~l~~r~~~~~~~a~~l~~~L~~~p~v~~v 314 (421)
T 2ctz_A 249 EAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGME--------------TLSLRAERHVENTLHLAHWLLEQPQVAWV 314 (421)
T ss_dssp HHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHT--------------THHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred hhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcc--------------hHHHHHHHHHHhHHHHHHHHHhCCCeeEE
Confidence 01122445555555554443 12333445557888899999998888765
No 221
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.91 E-value=2.2e-22 Score=209.27 Aligned_cols=370 Identities=15% Similarity=0.101 Sum_probs=240.5
Q ss_pred hHHHHHHHHHHhhcCCCCCCccceeeccCCCCcCCCCCCchHHHHHHhhcCCCCCCCcccccCCCCHHHHHHHHHHHhcC
Q 009517 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (533)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~p~~v~~~~~~~~~~~ 155 (533)
++.++++...++.||++ |||+..|.... ..+++ ++++++++.+++.+.
T Consensus 52 vi~rg~G~~l~D~dG~~------ylD~~~g~~~~----------------------~lGh~----~p~v~~Ai~~q~~~l 99 (473)
T 4e3q_A 52 VVTHGEGPYIVDVNGRR------YLDANSGLWNM----------------------VAGFD----HKGLIDAAKAQYERF 99 (473)
T ss_dssp EEEEEETTEEEETTCCE------EEETTTTTTTC----------------------TTCSC----CHHHHHHHHHHHHHC
T ss_pred EEEeeecCEEEeCCCCE------EEEcccCHHHh----------------------hccCC----CHHHHHHHHHHHHhc
Confidence 45566777777778777 88887775432 22222 699999999999874
Q ss_pred CCCCccccCCCcc-cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhcc------CCC-CeEEEcCCcCcc
Q 009517 156 PGRATGAYSHSQG-IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SEN-DGILCPIPQYPL 227 (533)
Q Consensus 156 ~~~~~~~Y~~~~G-~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~~g-d~Vlv~~p~~~~ 227 (533)
.. |....+ ..+....+|+.+.+..+ .+.++|+++++|+||++.+++.++. .++ .+|+....+|++
T Consensus 100 ~~-----~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG 172 (473)
T 4e3q_A 100 PG-----YHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHG 172 (473)
T ss_dssp CC-----CCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCC
T ss_pred cc-----ccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECC
Confidence 32 222111 22333445555555433 3457899999999999999998641 233 578999999998
Q ss_pred hHHHHHHhCC------------eEEEEecCCC---CCCCC--------CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 228 YSASIALHGG------------TLVPYYLDEA---TGWGL--------ETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 228 ~~~~~~~~g~------------~~~~v~~~~~---~~~~l--------d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
.......... ....++.... ...+- ..+++++.|.... ..++.+||++..+.-.|
T Consensus 173 ~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG 250 (473)
T 4e3q_A 173 VTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGG 250 (473)
T ss_dssp SSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTT
T ss_pred CccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCC
Confidence 6554433321 1222222110 00011 1345566665431 12567777776676677
Q ss_pred c-CCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEE
Q 009517 285 Q-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGY 362 (533)
Q Consensus 285 ~-~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~ 362 (533)
+ +++++.|++|.++|++||+++|+||++++|..+|. +.. .+..++.|| +.+++|.++ .| +++|.
T Consensus 251 ~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~--~fa-----~e~~gv~PD-----i~t~~K~l~--gG~~Pl~a 316 (473)
T 4e3q_A 251 VIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGN--TWG-----CVTYDFTPD-----AIISSKNLT--AGFFPMGA 316 (473)
T ss_dssp SBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSS--SCH-----HHHTTCCCS-----EEEECGGGG--TTSSCCEE
T ss_pred ceeCCHHHHHHHHHHhcccceEEeccCccccCCcccc--hhH-----HHhcCCCCC-----hHHhccccc--CCCCCccc
Confidence 6 56677899999999999999999999999876664 222 222334788 667899995 36 99999
Q ss_pred EEEecCCHHHHHHHHHh--------hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009517 363 MEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFN 434 (533)
Q Consensus 363 v~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 434 (533)
+++ .+++++.+... ...|++.++++++++.+.|+ ..+ .+.+.++.++..++|.+.|+
T Consensus 317 v~~---~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~-----------~i~-~~~l~~~~~~~g~~l~~~L~ 381 (473)
T 4e3q_A 317 VIL---GPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAID-----------VVM-NEGLAENVRRLAPRFEERLK 381 (473)
T ss_dssp EEE---CHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHH-----------HHH-HSSHHHHHHHHHHHHHHHHH
T ss_pred ccc---cHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhh-----------hhc-cccHHHHHHHHHHHHHHHHH
Confidence 998 99999888653 23678999999999998874 111 13455666667777777776
Q ss_pred cC---CCceEecCCceeEEecccCCCHHHHHHHHhcCCC----ChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec
Q 009517 435 SL---EGITCNKAEGAMYLFPRIQLPEKAIKAAEAEKTV----PDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL 507 (533)
Q Consensus 435 ~~---~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~ 507 (533)
++ |.+.-++..|.|+.+ .+..+.. .+...+ ....+ ...+.++||++.|. + +.+||++.
T Consensus 382 ~l~~~~~v~~vRG~Gl~~gi-elv~~~~-----~~~~~~~~~~~~~~~-~~~~~~~Gll~~~~---g-----~~i~l~PP 446 (473)
T 4e3q_A 382 HIAERPNIGEYRGIGFMWAL-EAVKDKA-----SKTPFDGNLSVSERI-ANTCTDLGLICRPL---G-----QSVVLCPP 446 (473)
T ss_dssp HHTTSTTEEEEEEETTEEEE-EECSBTT-----TTBCCCGGGCHHHHH-HHHHHHTTEECEEE---T-----TEEEECCC
T ss_pred HHhcCCCeeEEeecceEEEE-EEecCcc-----ccccccccHHHHHHH-HHHHHHCCcEEEec---C-----CEEEEeCC
Confidence 54 667667777766543 2211100 000111 12233 34556789999872 2 27899874
Q ss_pred --CCcCcHHHHHHHHHHHHHHHHHH
Q 009517 508 --PQEDKIPAIVTRLTDFHKNFMDK 530 (533)
Q Consensus 508 --~~~e~i~~~~~~l~~~l~~~~~~ 530 (533)
+++++|++++++|+++++++.++
T Consensus 447 L~it~~eid~~~~~l~~al~~v~ae 471 (473)
T 4e3q_A 447 FILTEAQMDEMFDKLEKALDKVFAE 471 (473)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999988765
No 222
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=9e-22 Score=209.05 Aligned_cols=324 Identities=13% Similarity=0.104 Sum_probs=216.7
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhc-------cCCCC------eEEEcCCcCcc
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-------RSEND------GILCPIPQYPL 227 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-------~~~gd------~Vlv~~p~~~~ 227 (533)
..|....+..++.+++.+++.+.+|.+ .+++++|+|+++|+..++.+++ ..+|+ +|+++.++|+.
T Consensus 138 ~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 138 YTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred CchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 457666677788888888888777744 6899999999999999988873 11465 89999999999
Q ss_pred hHHHHHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 009517 228 YSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 228 ~~~~~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~ 304 (533)
+...+...|. +++.+|+++ ++.+|+++|+++|++....|.++++|++++|+||||.+.+ +++|+++|++||+
T Consensus 216 ~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~ 290 (515)
T 2jis_A 216 IQKGAAFLGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGL 290 (515)
T ss_dssp HHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCC
Confidence 9999999888 899999864 5789999999999876555556899999999999999988 8999999999999
Q ss_pred EEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCH-HHHHHHH----Hh
Q 009517 305 VLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQIY----KV 379 (533)
Q Consensus 305 ~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~-~~~~~l~----~~ 379 (533)
++++|++|.++.+... .+. .....+. ..| +++.|++|.+ + .+.++|++++ .++ +++.... ..
T Consensus 291 ~l~vD~a~~~~~~~~~-~~~---~~~~g~~--~aD---~v~~s~hK~l-~-~p~g~G~l~~--~~~~~~~~~~~~~~~~y 357 (515)
T 2jis_A 291 WLHVDAAWGGSVLLSQ-THR---HLLDGIQ--RAD---SVAWNPHKLL-A-AGLQCSALLL--QDTSNLLKRCHGSQASY 357 (515)
T ss_dssp EEEEEETTGGGGGGCT-TTG---GGGTTGG--GCS---EEEECTTSTT-C-CCSCCEEEEE--SCCSCHHHHHHCC----
T ss_pred eEEEehhhhhHHHhCh-hhH---hhcCCCc--cCC---EEEECccccc-C-CCCCeeEEEE--eChHHHHHHHhcCCchh
Confidence 9999999998766432 111 1111110 134 6788999988 4 2367899988 233 3555421 11
Q ss_pred h-h--c------ccc---------CChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 009517 380 A-S--V------NLC---------SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITC 441 (533)
Q Consensus 380 ~-~--~------~~~---------~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 441 (533)
. . . ..+ ...+.+.++...+. .+.++++.++..++++++.+.|+++||+++
T Consensus 358 l~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg------------~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 425 (515)
T 2jis_A 358 LFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG------------DQGLERRIDQAFVLARYLVEEMKKREGFEL 425 (515)
T ss_dssp -----CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred ccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh------------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 1 0 0 000 11233333333331 234566778888999999999999889988
Q ss_pred ec-CCceeEEecccCCCHHHHHHHHhcCC-C-Ch--H------HHHHHHHHccceEEEcCCCCCCCCCCceEEEEec---
Q 009517 442 NK-AEGAMYLFPRIQLPEKAIKAAEAEKT-V-PD--A------FYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL--- 507 (533)
Q Consensus 442 ~~-~~gg~~~~~~~~~~~~~~~~~~~~~~-~-~~--~------~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~--- 507 (533)
+. +..+.++|..+ |... .+. + .+ . ..+...+.+.|+.+...... ....+++|++++
T Consensus 426 ~~~~~~~~v~f~~~--p~~~------~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~--~~~~~~lRis~~~~~ 495 (515)
T 2jis_A 426 VMEPEFVNVCFWFV--PPSL------RGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPH--GTRGNFFRVVVANSA 495 (515)
T ss_dssp SSCCSSSEEEEEEC--CGGG------TTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEE--TTEEEEEEEECCCTT
T ss_pred eCCCCeeEEEEEEe--Cccc------cccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEE--CCceEEEEEEeCCCC
Confidence 75 44455554221 1110 000 0 00 0 01223445567644311100 112348999994
Q ss_pred CCcCcHHHHHHHHHHHHHH
Q 009517 508 PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 508 ~~~e~i~~~~~~l~~~l~~ 526 (533)
.++++|++++++|++++++
T Consensus 496 ~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 496 LTCADMDFLLNELERLGQD 514 (515)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 7888999999999887653
No 223
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=1.4e-21 Score=202.06 Aligned_cols=229 Identities=15% Similarity=0.111 Sum_probs=167.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchHHHH----------HHhCCeEE
Q 009517 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASI----------ALHGGTLV 240 (533)
Q Consensus 172 lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~~~~----------~~~g~~~~ 240 (533)
.++++++.+.+.+|.+....+++++ +|++|+..++..++ ++||+|+++. |.|..+...+ +..|++++
T Consensus 66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~-~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGIL-RPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTC-CTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhC-CCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 3555555555555643322334455 67899999999988 8999999998 9999988655 34799999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEccccccccc
Q 009517 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKK--EGLVLLADEVYQENVY 317 (533)
Q Consensus 241 ~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~--~~~~lI~De~y~~~~~ 317 (533)
.++.++ ++.+|+++|++++++ ++++|+++ +||||+|.+.+.+++++|+++|++ +|+++|+||+|..+.+
T Consensus 144 ~v~~~~--~~~~d~e~l~~~l~~------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~ 215 (431)
T 3ht4_A 144 AVPLTE--GGLVDFEAVAAAIHS------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIE 215 (431)
T ss_dssp ECCBCT--TSSBCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSS
T ss_pred EeCCCC--CCCcCHHHHHhhcCC------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhcc
Confidence 999875 468999999999976 79999999 699999999999999999999999 9999999999999776
Q ss_pred cCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhh-cc----ccCChHHHH
Q 009517 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VN----LCSNISGQI 392 (533)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~-~~----~~~~~~~q~ 392 (533)
... + . .+ ..| +++.|+||+++|..+...||+++ ++++++.+..... .. .+++...+.
T Consensus 216 ~~~-~-~-------~~---g~D---i~~~S~sK~lgg~~~~~GG~v~~---~~~li~~l~~~~~~~~~g~~~~~~~~~~~ 277 (431)
T 3ht4_A 216 EQE-P-C-------HV---GAD---LMAGSLIKNPGGGIVKTGGYIVG---KEQYVEACAYRLTSPGIGAEAGASLYSLQ 277 (431)
T ss_dssp SCC-G-G-------GT---TCS---EEEEETTSGGGTTTCSSCEEEEE---CHHHHHHHHHHHSCTTTTTSCSCCCSCSH
T ss_pred CCC-c-c-------cc---CCe---EEEcCccccCCCCCCCceEEEEe---cHHHHHHHHHHhccCCcccccCccHHHHH
Confidence 432 1 0 11 134 78999999974312245599998 9999998876442 11 112122123
Q ss_pred HHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEec
Q 009517 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK 443 (533)
Q Consensus 393 a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 443 (533)
++...+ .....+.++..+++.++.+.|+++ |+.+.+
T Consensus 278 ~~~~~l--------------~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p 313 (431)
T 3ht4_A 278 EMYQGF--------------FLAPHVAGQALKGAIFTAAFLEKL-GMNTSP 313 (431)
T ss_dssp HHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHH-TCCEES
T ss_pred HHHhHh--------------hhHHHHHHHHHHHHHHHHHHHHhC-cCEecC
Confidence 333222 233556677788888999999888 666643
No 224
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.87 E-value=6.2e-21 Score=195.53 Aligned_cols=247 Identities=12% Similarity=0.130 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHhc---CCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHhccCCC
Q 009517 142 ADSIERAWQILDQ---IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 142 ~~v~~~~~~~~~~---~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~~g 215 (533)
.++++++.+.... ......+.|++. |..+|++.+|++++ .+..++ ++||++|+..++..++ ++|
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~-~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all-~~G 101 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDDE-GRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGIL-RPD 101 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHC-CTT
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCChh-HHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhc-CCC
Confidence 4566666554311 111123445544 57788888888875 344555 8899999999999998 899
Q ss_pred CeEEEcC-CcCcchHHH----------HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC----CC
Q 009517 216 DGILCPI-PQYPLYSAS----------IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN----PG 280 (533)
Q Consensus 216 d~Vlv~~-p~~~~~~~~----------~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~----p~ 280 (533)
|+|+++. |.|..+... ++..|++++.++.++ ++.+|++++++++++ ++++|++++ |+
T Consensus 102 D~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~------~tklV~i~~s~g~p~ 173 (409)
T 3jzl_A 102 DELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTP------KTKMIGIQRSRGYAD 173 (409)
T ss_dssp CEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCT------TEEEEEEECSCTTSS
T ss_pred CEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccC------CCeEEEEECCCCCCC
Confidence 9999998 999998754 456799999998864 467999999999976 799999999 99
Q ss_pred CCCccCCCHHHHHHHHHHHHH--cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-
Q 009517 281 NPTGQVLAEENQRAIVDFCKK--EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG- 357 (533)
Q Consensus 281 NPtG~~~s~~~l~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G- 357 (533)
||||.+. ++++|+++|++ +|+++|+|++|..+.+... +. .+ ..| |++.|+||++ |.+|
T Consensus 174 nptg~v~---~l~~I~~la~~~~~~~~livD~a~~~~~~~~~-p~--------~~---g~D---iv~~S~sK~l-gg~~~ 234 (409)
T 3jzl_A 174 RPSFTIE---KIKEMIVFVKNINPEVIVFVDNCYGEFVEYQE-PP--------EV---GAD---IIAGSLIKNP-GGGLA 234 (409)
T ss_dssp SCCCCHH---HHHHHHHHHHHHCTTCEEEEECTTCTTTSSCC-SG--------GG---TCS---EEEEETTSGG-GTTTC
T ss_pred CCcCccc---cHHHHHHHHHhhCCCCEEEEeCCcccccccCC-cc--------cc---CCe---EEEECccccC-CccCC
Confidence 9999874 59999999999 9999999999988664322 10 11 234 8899999999 5445
Q ss_pred CeeEEEEEecCCHHHHHHHHHhhh-c----cccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 358 KRGGYMEVTGFSAEVREQIYKVAS-V----NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDA 432 (533)
Q Consensus 358 ~riG~v~~~~~~~~~~~~l~~~~~-~----~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 432 (533)
.+.||+++ ++++++.+..... . ..++....+.++...| +....++++..+++.++.+.
T Consensus 235 ~~GG~v~~---~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl--------------~~~~~r~~~~~~~a~~la~~ 297 (409)
T 3jzl_A 235 KTGGYIAG---KEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF--------------FLAPHVTAQAIKGARFTAAM 297 (409)
T ss_dssp SSCEEEEE---CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEe---CHHHHHHHHHHhccccccccccccHHHHHHHHHHH--------------hhHHHHHHHHHHHHHHHHHH
Confidence 45799998 8999999877432 1 1122221123332222 33455667778889999999
Q ss_pred HhcCCCceEec
Q 009517 433 FNSLEGITCNK 443 (533)
Q Consensus 433 L~~~~g~~~~~ 443 (533)
|+++ |+++.+
T Consensus 298 L~~~-g~~v~p 307 (409)
T 3jzl_A 298 LAEF-GVEADP 307 (409)
T ss_dssp HHHT-TCEEES
T ss_pred HHhC-CCcccC
Confidence 9998 777644
No 225
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.87 E-value=1.2e-20 Score=194.01 Aligned_cols=230 Identities=15% Similarity=0.109 Sum_probs=169.7
Q ss_pred ccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchHHH------
Q 009517 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSAS------ 231 (533)
Q Consensus 162 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~~~------ 231 (533)
.|+.. |..+|++.+|++++ .+..++ ++||++|+..++..++ ++||+|++++ |.|..+...
T Consensus 69 ~y~~~-~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all-~pGD~Vl~~~~~~y~~~~~~~g~~~~ 138 (427)
T 3i16_A 69 GYGDI-GRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNL-RPGNTMLSVCGEPYDTLHDVIGITEN 138 (427)
T ss_dssp CTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHC-CTTCEEEESSSSCCGGGHHHHTCSCC
T ss_pred CCCHH-HHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHh-CCCCEEEEeCCCccHHHHHHHhcccc
Confidence 34443 57788888888875 233355 8889999999999998 8999999999 999988743
Q ss_pred -----HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC----CCCCCccCCCHHHHHHHHHHHHH-
Q 009517 232 -----IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN----PGNPTGQVLAEENQRAIVDFCKK- 301 (533)
Q Consensus 232 -----~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~----p~NPtG~~~s~~~l~~i~~l~~~- 301 (533)
+...|++++.++.+++ +.+|++++++++++ .+++++|++++ |+||||.+ .++++|+++|++
T Consensus 139 ~~~~~l~~~G~~~~~v~~~~~--g~~D~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~ 209 (427)
T 3i16_A 139 SNMGSLKEFGINYKQVDLKED--GKPNLEEIEKVLKE----DESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNI 209 (427)
T ss_dssp CSSCCTGGGTCEEEECCCCTT--SSCCHHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHH
T ss_pred chHHHHHHcCCEEEEecCccC--CCcCHHHHHHHhhC----CCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHh
Confidence 4567999999998653 47899999999982 01799999998 99999876 569999999999
Q ss_pred -cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHh
Q 009517 302 -EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV 379 (533)
Q Consensus 302 -~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~ 379 (533)
+|+++|+|++|..+.+... +. .+ ..| |+++|+||++ |.+| .+.||+++ ++++++.+...
T Consensus 210 ~~g~~livD~a~~~~~~~~~-p~--------~~---gaD---iv~~S~sK~l-gg~g~~~gG~i~~---~~~li~~l~~~ 270 (427)
T 3i16_A 210 RKDIICFVDNCYGEFMDTKE-PT--------DV---GAD---LIAGSLIKNI-GGGIAPTGGYLAG---TKDCIEKTSYR 270 (427)
T ss_dssp CTTSEEEEECTTTTTSSSSC-GG--------GG---TCS---EEEEETTSGG-GTTTCCSCEEEEE---CHHHHHHHHHH
T ss_pred CCCCEEEEECCCccccccCC-cc--------cc---CCe---EEEecCcccC-CCCCCceEEEEEE---CHHHHHHHHHh
Confidence 9999999999988664321 10 11 234 8899999999 5445 67899998 99999998874
Q ss_pred hh-ccc--cCCh-HH-HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Q 009517 380 AS-VNL--CSNI-SG-QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA 444 (533)
Q Consensus 380 ~~-~~~--~~~~-~~-q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 444 (533)
.. ... ...+ +. ..++... .+.+..+.++..+++.++.+.|+++ |+.+.+.
T Consensus 271 ~~~~~~g~~~~~~~~~a~~~l~g--------------l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~ 325 (427)
T 3i16_A 271 LTVPGIGGECGSTFGVVRSMYQG--------------LFLAPHISMEALKGAILCSRIMELA-GFEVMPK 325 (427)
T ss_dssp HSCTTTGGGCCCCTTCHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC
T ss_pred cccCccCccCCccHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC
Confidence 32 111 1111 22 2222222 2334566777888899999999998 6676543
No 226
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.87 E-value=1.4e-20 Score=193.46 Aligned_cols=230 Identities=15% Similarity=0.138 Sum_probs=169.6
Q ss_pred cccCCCcccHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchHH------
Q 009517 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSA------ 230 (533)
Q Consensus 161 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~~------ 230 (533)
+.|++. |..+|++.+|++++ .+..++ ++||++|+..++.+++ +|||+|++++ |.|..+..
T Consensus 69 y~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all-~pGD~Vl~~~~~~y~~~~~~~g~~~ 138 (427)
T 3hvy_A 69 YGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNL-RPNDTMMSICGMPYDTLHDIIGMDD 138 (427)
T ss_dssp TCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTC-CTTCEEEECSSSCCGGGHHHHTCCT
T ss_pred CCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhc-CCCCEEEEeCCCCchhHHHHhcccc
Confidence 445554 57888888888875 344566 7889999999999998 8999999999 99998773
Q ss_pred -----HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeC----CCCCCccCCCHHHHHHHHHHHHH
Q 009517 231 -----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN----PGNPTGQVLAEENQRAIVDFCKK 301 (533)
Q Consensus 231 -----~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~----p~NPtG~~~s~~~l~~i~~l~~~ 301 (533)
.++..|++++.++.+ ++.+|++++++++++ .+++|+|++++ |+||||.+ .++++|+++|++
T Consensus 139 ~~~~~~l~~~G~~~~~v~~~---~~~~d~e~l~~~i~~----~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~~ 208 (427)
T 3hvy_A 139 SKKVGSLREYGVKYKMVDLK---DGKVDINTVKEELKK----DDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIRE 208 (427)
T ss_dssp TCCSCCTGGGTCEEEECCCB---TTBCCHHHHHHHHHH----CTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHHH
T ss_pred chhhhHHHHcCCEEEEecCC---CCCcCHHHHHHHhhC----CCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHHH
Confidence 345679999999882 458999999999983 11799999999 99999876 459999999999
Q ss_pred --cCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHH
Q 009517 302 --EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK 378 (533)
Q Consensus 302 --~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~ 378 (533)
+|+++|+|++|..+.+... +. .+ ..| |++.|+||++ |.+| .+.||+++ ++++++.+..
T Consensus 209 ~~~g~~livD~a~~~~~~~~~-p~--------~~---gaD---iv~~S~sK~l-gg~g~~~GG~i~~---~~~li~~l~~ 269 (427)
T 3hvy_A 209 VNENVIVFVDNCYGEFVEEKE-PT--------DV---GAD---IIAGSLIKNI-GGGIATTGGYIAG---KEEYVTQATF 269 (427)
T ss_dssp HCSSSEEEEECTTCTTTSSSC-GG--------GG---TCS---EEEEETTSGG-GTTTCCSCEEEEE---CHHHHHHHHH
T ss_pred hCCCCEEEEECCccccccCCC-Cc--------cc---CCe---EEEECCcccc-cccccceEEEEEE---CHHHHHHHHH
Confidence 8999999999988664321 10 11 234 8899999999 5344 56799988 9999999887
Q ss_pred hhh-ccc---cCChHH-HHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Q 009517 379 VAS-VNL---CSNISG-QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA 444 (533)
Q Consensus 379 ~~~-~~~---~~~~~~-q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 444 (533)
... ... ..+++. +.++...+ ..+..+.++..+++.++.+.|+++ |+.+.+.
T Consensus 270 ~~~~~~~g~~~~~~~~~a~~~~~gl--------------~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~ 325 (427)
T 3hvy_A 270 RVTVPGIGGECGSTFGVMRSLYEGL--------------FMAPHVTIEAVKGAVFCARIMELA-GFDVLPK 325 (427)
T ss_dssp HHSCTTTGGGCCCCTTCHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC
T ss_pred HhhcCCcccccCCCHHHHHHHHHhH--------------hHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC
Confidence 532 111 112122 33333222 234456677888888999999998 7676543
No 227
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.86 E-value=7e-21 Score=207.50 Aligned_cols=317 Identities=14% Similarity=0.106 Sum_probs=196.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH-HHHhCCeEEEEecCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGGTLVPYYLDEA 247 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~-~~~~g~~~~~v~~~~~ 247 (533)
..++++.+|++++ .+ ..+++++|+++++..++.+++ ++||+|+++.|+|..+... +...|++++.++....
T Consensus 175 i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~-~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~ 246 (730)
T 1c4k_A 175 AVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALV-SNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRN 246 (730)
T ss_dssp HHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEEC
T ss_pred HHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5788888888864 22 347889999999999999998 8999999999999988877 7888999998876532
Q ss_pred CCCC----CCHHHH-----HHHHHHH-Hh--cCCCe-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 248 TGWG----LETSEV-----KKQLEAA-KA--KGITV-RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 248 ~~~~----ld~~~l-----~~~i~~~-~~--~g~~~-~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
+|+ +|+++| +++|++. .+ ..+.+ ++|++++| ||||.+.+ +++|+++|+++|+++|+||+|..
T Consensus 247 -~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~ 321 (730)
T 1c4k_A 247 -PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVG 321 (730)
T ss_dssp -TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCC
T ss_pred -ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEccccc
Confidence 344 688888 7777541 00 00011 89999999 58999988 89999999999999999999974
Q ss_pred -ccccCCCCcccHHHHHh-hcCCCCCCceEEEEecCCccCCCCCCCeeEEEE-EecCCHHH--------HHHHHHhhh--
Q 009517 315 -NVYVPEKKFHSFKKVSR-SMGYGEKDISLVSFQSVSKGYYGECGKRGGYME-VTGFSAEV--------REQIYKVAS-- 381 (533)
Q Consensus 315 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~-~~~~~~~~--------~~~l~~~~~-- 381 (533)
+.|.+..+..+ .+.. .++ ..+.+++++.|+||+++ |.+.|+++ +. +..+ ...+.....
T Consensus 322 ~~~f~~~~~g~~--~l~~~~~g--~D~~~~iv~~S~hK~L~---g~~~gg~I~v~--~~~l~g~~~~i~~~~~~~~~~~~ 392 (730)
T 1c4k_A 322 YEQFIPMMRNSS--PLLIDDLG--PEDPGIIVVQSVHKQQA---GFSQTSQIHKK--DSHIKGQLRYCDHKHFNNSFNLF 392 (730)
T ss_dssp GGGSSGGGGGGC--TTSCCCCC--TTSCEEEEEECHHHHSS---CCTTCEEEEEE--CGGGTTSTTCCCHHHHHHHHHHH
T ss_pred ccccCcccCCcC--cccccccC--CCCCCEEEEECCCCCCC---CCCCEEEEEec--chhhcCcccccCHHHHHHHHHHh
Confidence 33432101000 0100 111 12335799999999873 66655444 31 2211 122222211
Q ss_pred ccccCChHHHHHHHHHcCCCCCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCc-------------
Q 009517 382 VNLCSNISGQILASLVMSPPKVGDESYESYCA-ERDGILSSLARRAKTLEDAFNS-LEGITCNKAEG------------- 446 (533)
Q Consensus 382 ~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~g------------- 446 (533)
.+.+++....++...++. .... .-....+++.++.+.+++.|++ ++|+.+..|..
T Consensus 393 ~stsp~~~~iaal~aA~~----------~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~ 462 (730)
T 1c4k_A 393 MSTSPFYPMYAALDVNAA----------MQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTED 462 (730)
T ss_dssp SCSSCCHHHHHHHHHHHH----------HHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHH
T ss_pred CCCCCcHHHHHHHHHHHH----------HHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccccccccccccccccc
Confidence 223444444443333331 0111 1234556677778888899988 67888765431
Q ss_pred ------------------------e-eE-----EecccCCCHH--HHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCC
Q 009517 447 ------------------------A-MY-----LFPRIQLPEK--AIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFG 494 (533)
Q Consensus 447 ------------------------g-~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~ 494 (533)
+ ++ +.+.+ |.- ........|. +... +.+.|.++||.+...
T Consensus 463 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~--pg~~~~~g~~~~~g~-~~~~-l~~~L~e~GI~v~~~---- 534 (730)
T 1c4k_A 463 MANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTT--PGINPETGDYEDFGV-PATI-VANYLRDHGIIPEKS---- 534 (730)
T ss_dssp HTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEEC--SSEETTTTEECSSCC-CHHH-HHHHHHHTTCCCSEE----
T ss_pred ccccchhhccCccchhccccccCCcccccCCeEEEEEe--CCcccccccccccCC-CHHH-HHHHHHHCCcEEEEC----
Confidence 1 11 12111 100 0000000111 2233 345566679988642
Q ss_pred CCCCCceEEEEec--CCcCcHHHHHHHHHHHHHHHH
Q 009517 495 QVPGTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFM 528 (533)
Q Consensus 495 ~~~g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 528 (533)
+...+|+++. .++++++.++++|.++.+.+.
T Consensus 535 ---~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 535 ---DLNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp ---CSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 2337888885 788899999999999887663
No 228
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.85 E-value=6.1e-20 Score=201.91 Aligned_cols=175 Identities=17% Similarity=0.168 Sum_probs=131.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCC
Q 009517 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (533)
Q Consensus 169 ~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 248 (533)
..++++.++++++ .+ +.+++++|+++++..++.+++ ++||+|+++.|+|..+...+...|++++.++....
T Consensus 207 v~~~ee~la~l~G------~d-~~i~~~~Gtt~a~~~~i~al~-~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~- 277 (755)
T 2vyc_A 207 FGESEKYAARVFG------AD-RSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN- 277 (755)
T ss_dssp HHHHHHHHHHHHT------CS-EEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-
T ss_pred HHHHHHHHHHHhC------CC-ceEEECCcHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-
Confidence 5677777777764 22 457889999999999999998 89999999999999998889999999999987643
Q ss_pred CCC----C-----CHHHHHHHHHHH----HhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 249 GWG----L-----ETSEVKKQLEAA----KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 249 ~~~----l-----d~~~l~~~i~~~----~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
+|+ + |+++|+++|++. ...+.+++++++++| ||||.+.+ +++|+++|++||+++|+||+|...
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTT
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchh
Confidence 344 4 999999999762 112334468999998 79999988 899999999999999999999753
Q ss_pred -cccCCC-CcccHHHHH--hhcCCCCCCceEEEEecCCccCCCCCCCe-eEEEEE
Q 009517 316 -VYVPEK-KFHSFKKVS--RSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEV 365 (533)
Q Consensus 316 -~~~~~~-~~~~~~~~~--~~~~~~~~~~~vi~i~S~SK~~~gl~G~r-iG~v~~ 365 (533)
.+.+.. +...+ .. .+ ..+.++|++.|+||+++ |.+ .|++++
T Consensus 354 ~~~~~~~~~~~~~--~g~~aD----~~~~~~iv~~S~hK~L~---g~~~g~~i~~ 399 (755)
T 2vyc_A 354 ARFNPIYADHYAM--RGEPGD----HNGPTVFATHSTHKLLN---ALSQASYIHV 399 (755)
T ss_dssp GGGCGGGTTSSSS--CSCCCC----CSSBEEEEEEETTTSSS---CCTTCEEEEE
T ss_pred cccCcccCCcchh--cCCcCC----ccCCCeEEEECcccccc---CcCCeeeeee
Confidence 232210 11111 10 01 13446889999999873 666 455555
No 229
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.78 E-value=1.1e-18 Score=193.21 Aligned_cols=343 Identities=13% Similarity=0.101 Sum_probs=205.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccCCCcccHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHhcc----CC-
Q 009517 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLIR----SE- 214 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~----~~- 214 (533)
++++++++.+++.+... +.......+....+|+.+.+..+ -. .+.|+++++|++|++.+++.+++ ..
T Consensus 399 ~p~i~~Ai~~Q~~~l~h-----~~~~~~~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g 471 (831)
T 4a0g_A 399 QAELAREMGYTAARFGH-----VMFPENVYEPALKCAELLLDGVG--KGWASRVYFSDNGSTAIEIALKMAFRKFCVDHN 471 (831)
T ss_dssp HHHHHHHHHHHHHHHSS-----CCCTTEECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHhhccc-----ccccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCChhHHHHHHHHHHHHHHHhhcC
Confidence 48899999999887321 11111122334455666554322 12 46899999999999999998731 11
Q ss_pred -----------CCeEEEcCCcCcchHHHHHHh-CCe---------------E-------------EEEecCCC------C
Q 009517 215 -----------NDGILCPIPQYPLYSASIALH-GGT---------------L-------------VPYYLDEA------T 248 (533)
Q Consensus 215 -----------gd~Vlv~~p~~~~~~~~~~~~-g~~---------------~-------------~~v~~~~~------~ 248 (533)
..+|+....+|++-....... |.. + ..++.... +
T Consensus 472 ~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~ 551 (831)
T 4a0g_A 472 FCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPE 551 (831)
T ss_dssp C---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSS
T ss_pred CCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccc
Confidence 236888999999865444333 210 0 01111100 0
Q ss_pred --CCCCC------------------HHHHHHHHHHHH--hcCCCeeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCC
Q 009517 249 --GWGLE------------------TSEVKKQLEAAK--AKGITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 249 --~~~ld------------------~~~l~~~i~~~~--~~g~~~~~iil~~p-~NPtG~-~~s~~~l~~i~~l~~~~~~ 304 (533)
.|. | .+.|++.|++.. ....++.+||++.. ++..|. +++++.+++|.++|++||+
T Consensus 552 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gi 630 (831)
T 4a0g_A 552 YGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKI 630 (831)
T ss_dssp TTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTC
T ss_pred ccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCC
Confidence 000 1 245666665310 11236777887765 788887 5688899999999999999
Q ss_pred EEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCC-CeeEEEEEecCCHHHHHHHHHh----
Q 009517 305 VLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV---- 379 (533)
Q Consensus 305 ~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G-~riG~v~~~~~~~~~~~~l~~~---- 379 (533)
++|+||++++|.+.|. ......+ ++ .|| +.+|||.++ .| +++|++++ ++++++.+...
T Consensus 631 lLI~DEV~tGfGRtG~--~fa~e~~--gv---~PD-----iitlsK~L~--gG~~Plgav~~---~~~i~~~~~~~~~~~ 693 (831)
T 4a0g_A 631 PVIFDEVFTGFWRLGV--ETTTELL--GC---KPD-----IACFAKLLT--GGMVPLAVTLA---TDAVFDSFSGDSKLK 693 (831)
T ss_dssp CEEEECTTTTTTTTSB--SSTHHHH--SS---CCS-----EEEECGGGG--TTSSCCEEEEE---CHHHHHTTCSSCGGG
T ss_pred eEEEEcCccccccCCC--chhhHhc--CC---CCc-----EEEEecccc--cCccCcEEEEE---CHHHHHHHhcccccc
Confidence 9999999999877664 2332221 22 577 457999994 37 89999998 99999887542
Q ss_pred ---hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCceEecCCceeEEecccC
Q 009517 380 ---ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR-AKTLEDAFNSLEGITCNKAEGAMYLFPRIQ 455 (533)
Q Consensus 380 ---~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~g~~~~~~~gg~~~~~~~~ 455 (533)
...+++.++++++++.+.|+..+. +. +.+.+.++.+.+++. ++.+.+.+.+.|.+..+++.|.|+.+- +.
T Consensus 694 ~~~hg~T~~g~Pla~Aaala~L~~i~~-~~----l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~ie-l~ 767 (831)
T 4a0g_A 694 ALLHGHSYSAHAMGCATAAKAIQWFKD-PE----TNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALE-LK 767 (831)
T ss_dssp SCCCCCTTTTCHHHHHHHHHHHHHHHC-TT----TCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEE-EC
T ss_pred cceeecCCcccHHHHHHHHHHHHHHHh-hH----HHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEE-Ee
Confidence 236788999999999887741000 00 000000000111110 123445566667788888888766542 32
Q ss_pred CCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEe--cCCcCcHHHHHHHHHHHHHHH
Q 009517 456 LPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVTRLTDFHKNF 527 (533)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~--~~~~e~i~~~~~~l~~~l~~~ 527 (533)
.+.. .. .........++ ..|.++||++.|+ + +.+||++ .+++++|++++++|+++++++
T Consensus 768 ~~~~--~~--~~~~~~a~~~~-~~l~e~Gv~v~p~---g-----~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 768 ADAS--NS--GYASLYAKSLL-IMLREDGIFTRPL---G-----NVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp -------------CHHHHHHH-HHHHHTTEECCCB---T-----TEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cCcc--cc--ccchHHHHHHH-HHHHHCCcEEEec---C-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1100 00 00000122333 4456789999973 1 3899996 489999999999999988654
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.76 E-value=1.5e-17 Score=179.77 Aligned_cols=230 Identities=13% Similarity=0.103 Sum_probs=154.1
Q ss_pred cccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCC
Q 009517 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE 246 (533)
Q Consensus 167 ~G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~ 246 (533)
.-+.++++.+|++++. ...+++++|++.|+..++.+++ ++||+|+++.++|.++...+...|++++.++...
T Consensus 195 g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~-~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~ 266 (715)
T 3n75_A 195 GPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSA-PAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTR 266 (715)
T ss_dssp THHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCB
T ss_pred HHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhC-CCCCEEEECCCccHHHHHHHHHcCCEEEEEeccc
Confidence 3367899999998752 2346778888899999999998 8999999999999999999999999999998764
Q ss_pred CCCCCC---------CHHHHHHHHHHHHhcCCCee---EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 009517 247 ATGWGL---------ETSEVKKQLEAAKAKGITVR---ALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (533)
Q Consensus 247 ~~~~~l---------d~~~l~~~i~~~~~~g~~~~---~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~ 314 (533)
+ +|++ |++.|+++|++. ++++ ++++++| ||+|.+++ +++|+++|+++ .+|+||+|..
T Consensus 267 ~-~~gi~~~i~~~~~d~e~Le~~l~~~----~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~ 335 (715)
T 3n75_A 267 N-AYGILGGIPQSEFQHATIAKRVKET----PNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVP 335 (715)
T ss_dssp C-TTCCBCCCCGGGGSHHHHHHHHHHS----TTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCT
T ss_pred c-ccccccCcccccCCHHHHHHHHhhC----cCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEcccccc
Confidence 3 5664 899999999862 1234 8999999 99999998 77888888765 3799999975
Q ss_pred cc-ccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCC-eeEEEEEecCCHHH-HHHHHHhhh--ccccCChH
Q 009517 315 NV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFSAEV-REQIYKVAS--VNLCSNIS 389 (533)
Q Consensus 315 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~-riG~v~~~~~~~~~-~~~l~~~~~--~~~~~~~~ 389 (533)
.. |.+..+..+ .+..+. ..|..+++++|++|+++ |+ ..|++++ +.++ ...+..... .+.+++.+
T Consensus 336 ~~~f~~~~~~~~--al~~g~---~aD~vii~~~S~hKtL~---gltqgs~i~v---~~~i~~~~~~~~~~~~~STSpsy~ 404 (715)
T 3n75_A 336 YTNFSPIYEGKC--GMSGGR---VEGKVIYETQSTHKLLA---AFSQASMIHV---KGDVNEETFNEAYMMHTTTSPHYG 404 (715)
T ss_dssp TGGGSGGGTTSS--TTSSSC---CTTCEEEEEECHHHHSS---CCTTCEEEEE---ESCCCHHHHHHHHHHTSCSSCCHH
T ss_pred ccccCCcccccc--ccccCc---CCCEEEEEEeccccccc---CCCCeeEEEe---CchhhHHHHHHHHHhhcCCCchHH
Confidence 43 432111001 110000 13433467999999984 55 3577776 2221 222333322 33455665
Q ss_pred HHHHHHHHcCCCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Q 009517 390 GQILASLVMSPPKVGDESYESYC-AERDGILSSLARRAKTLEDAFNSL 436 (533)
Q Consensus 390 ~q~a~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 436 (533)
..+++..+++ ... .+-+.+++++.++.+.+++.|+++
T Consensus 405 ~~AsldaA~~----------~~~~~~g~~~~~~l~~~a~~~r~~L~~i 442 (715)
T 3n75_A 405 IVASTETAAA----------MMKGNAGKRLINGSIERAIKFRKEIKRL 442 (715)
T ss_dssp HHHHHHHHHH----------HHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----------HHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 5555554431 011 122345566666777777777665
No 231
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.73 E-value=1.9e-17 Score=167.10 Aligned_cols=315 Identities=11% Similarity=0.057 Sum_probs=199.1
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCcccc--CC-----CcccHHHHHHHHHHHHhhcCCCCCC-CCEEE-cCChHHHHHHHHH
Q 009517 138 GLFSADSIERAWQILDQIPGRATGAY--SH-----SQGIKGLRDTIAAGIEARDGFPADP-NDIFL-TDGASPAVHMMMQ 208 (533)
Q Consensus 138 ~~~p~~v~~~~~~~~~~~~~~~~~~Y--~~-----~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~-t~G~~~al~~~~~ 208 (533)
...|++|++++.+.+.+..++....+ .. ..-+.+.|+.++++++ ++. ++|++ |.|+|++++.++.
T Consensus 22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHHHH
Confidence 33489999999987764322111111 11 1113456666777664 433 57888 5799999999999
Q ss_pred HhccCC--CCeEEEcCCcCcch--HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 209 LLIRSE--NDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 209 ~l~~~~--gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
.+. .+ ||+|++..-++... ...++..|..++.++.+. +++++++.++.++++ ++++|.+++..|.||
T Consensus 96 ~l~-~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~--~~~~~~~~~~~~i~~------~t~lV~~~h~et~tG 166 (377)
T 3e77_A 96 NLI-GLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG--SYTKIPDPSTWNLNP------DASYVYYCANETVHG 166 (377)
T ss_dssp HHG-GGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS--SSCSCCCGGGCCCCT------TCSCEEEESEETTTT
T ss_pred hcc-CCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC--CcCCCCChHHhccCC------CccEEEEeCccCchh
Confidence 987 44 89987766544432 234455677766666643 346677776666654 799999998889999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
++.+. +|+++|+++++|.+++- |..+ .++ .+ -+ +++.|-.|++ |++|+ |+++
T Consensus 167 ~~~pi--------i~~~~~~~~~vD~~q~~----g~~~-id~----~~-----~~---~~~~s~~K~~-gp~G~--g~l~ 218 (377)
T 3e77_A 167 VEFDF--------IPDVKGAVLVCDMSSNF----LSKP-VDV----SK-----FG---VIFAGAQKNV-GSAGV--TVVI 218 (377)
T ss_dssp EECSS--------CCCCTTCCEEEECTTTT----TSSC-CCG----GG-----CS---EEEEEGGGTT-SCTTC--EEEE
T ss_pred eEchh--------hhccCCCEEEEEccccc----CCCC-Cch----hh-----cC---EEEEeccccc-CCCcc--EEEE
Confidence 99983 36788999999999975 3222 221 11 12 3567889999 88885 5555
Q ss_pred EecCCHHHHHHH----------HHh---hhccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHH
Q 009517 365 VTGFSAEVREQI----------YKV---ASVNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTL 429 (533)
Q Consensus 365 ~~~~~~~~~~~l----------~~~---~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 429 (533)
+ .+++++.+ ... .....+++..+.+++..+|+ ...+. ++.+.++.++..+++
T Consensus 219 ~---~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~----------~l~~~GG~~~i~~~~~~l~~~l 285 (377)
T 3e77_A 219 V---RDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLE----------WIKNNGGAAAMEKLSSIKSQTI 285 (377)
T ss_dssp E---ETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHH----------HHHHTTHHHHHHHHHHHHHHHH
T ss_pred E---cHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHHHHHH
Confidence 5 33332111 111 11234556666666666663 11222 677888899999999
Q ss_pred HHHHhcCCCceEecC----CceeEEecccCCCHHHHHHHHhcCCCC----hHHHHHHHHHccceEEEcCCCCCCCCCCce
Q 009517 430 EDAFNSLEGITCNKA----EGAMYLFPRIQLPEKAIKAAEAEKTVP----DAFYCRRLLNATGIVLVPGSGFGQVPGTWH 501 (533)
Q Consensus 430 ~~~L~~~~g~~~~~~----~gg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~ 501 (533)
++.|++++|+..... ..+..+.+.++. ... +..++.. +.++||.+.+|... .+ .
T Consensus 286 ~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~------------~~~~~~~~~~~l~~-l~~~Gi~~~~g~~~---~g--~ 347 (377)
T 3e77_A 286 YEIIDNSQGFYVCPVEPQNRSKMNIPFRIGN------------AKGDDALEKRFLDK-ALELNMLSLKGHRS---VG--G 347 (377)
T ss_dssp HHHHHTSTTSEECCSCGGGBCSSEEEEEESS------------TTCCHHHHHHHHHH-HHHTTEESCBCCTT---TC--S
T ss_pred HHHHHhcCCceecCCCHHHcCCcEEEEEcCC------------CCCchhHHHHHHHH-HHHCCcEEeCCCCc---CC--E
Confidence 999999988874331 223222222221 111 1233333 45689999887632 23 6
Q ss_pred EEEEec--CCcCcHHHHHHHHHHHHHH
Q 009517 502 FRCTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 502 iRis~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
||+|+. +++++|+.+++.|++++++
T Consensus 348 iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 348 IRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999996 7899999999999988765
No 232
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.73 E-value=1.7e-17 Score=168.47 Aligned_cols=315 Identities=13% Similarity=0.054 Sum_probs=193.5
Q ss_pred cCCCCHHHHHHHHHHHhcCCCCCcc-----ccC--CCcccHHHHHHHHHHHHhhcCCCCCC-CCEEE-cCChHHHHHHHH
Q 009517 137 QGLFSADSIERAWQILDQIPGRATG-----AYS--HSQGIKGLRDTIAAGIEARDGFPADP-NDIFL-TDGASPAVHMMM 207 (533)
Q Consensus 137 ~~~~p~~v~~~~~~~~~~~~~~~~~-----~Y~--~~~G~~~lr~aia~~~~~~~g~~~~~-~~i~~-t~G~~~al~~~~ 207 (533)
|...|++|++++.+.+.+..+.... ... -..-+.+.|+.++++++ ++. ++|++ |.|+|++++.++
T Consensus 35 pt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~ai 108 (386)
T 3qm2_A 35 PAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFCHGGGRGQFAGVP 108 (386)
T ss_dssp SCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEEESCTTHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHH
Confidence 3445899999987766432211111 111 12347788999999986 433 46888 689999999999
Q ss_pred HHhccCCCCeEEEcCCcCcch--HHHHHHhCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCC
Q 009517 208 QLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLD--EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (533)
Q Consensus 208 ~~l~~~~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~~--~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPt 283 (533)
..++ .+||+|++..-++... ...++..| ++..++.+ +. ++.++++.++.++++ ++++|.+++..|.|
T Consensus 109 ~~l~-~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~-G~~~~~~~~~~~l~~------~t~lV~~~h~et~t 179 (386)
T 3qm2_A 109 LNLL-GDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVD-GKRAVKPMREWQLSD------NAAYLHYCPNETID 179 (386)
T ss_dssp HHHC-TTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEET-TEEEECCGGGCCCCT------TCSCEEECSEETTT
T ss_pred Hhcc-CCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccC-CCCCCchHHHhhcCC------CCcEEEEECCcCCc
Confidence 9998 7899886544433332 33445568 88888876 22 333677778777765 79999888888899
Q ss_pred ccC-CCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEE
Q 009517 284 GQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (533)
Q Consensus 284 G~~-~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~ 362 (533)
|++ .+ +++|. +|+++++|.+++- |..+ .++ .++ + +.+.|-.|.+ |++| +|+
T Consensus 180 G~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~p-idv----~~~-----~---~~~~s~hK~l-GP~G--~g~ 231 (386)
T 3qm2_A 180 GIAIDE---TPDFG-----PEVVVTADFSSTI----LSAP-LDV----SRY-----G---VIYAGAQKNI-GPAG--LTL 231 (386)
T ss_dssp TEECCC---CCCCC-----TTCCEEEECTTTT----TSSC-CCG----GGC-----S---EEEEETTTTT-CCTT--EEE
T ss_pred CEecCc---hhhhc-----CCCEEEEEccccc----CCCC-CCc----ccc-----C---EEEEeccccc-CCCc--cEE
Confidence 996 66 55553 7999999999874 3222 222 111 2 3457889998 7777 566
Q ss_pred EEEecCCHHHHHHH----------HHhh---hccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHH
Q 009517 363 MEVTGFSAEVREQI----------YKVA---SVNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAK 427 (533)
Q Consensus 363 v~~~~~~~~~~~~l----------~~~~---~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 427 (533)
+++ .+++++.+ .... ....+++..+.+++..+++ ...++ ++.+.++.++.++
T Consensus 232 l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~----------~~~~~gG~~~i~~~~~~l~~ 298 (386)
T 3qm2_A 232 VIV---REDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFK----------WLKAQGGVAAMHKINQQKAE 298 (386)
T ss_dssp EEE---EGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHH----------HHHHHTHHHHHHHHHHHHHH
T ss_pred EEE---CHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHH----------HHHHhcCHHHHHHHHHHHHH
Confidence 665 44432111 1111 1223456666666666653 12232 6778888899999
Q ss_pred HHHHHHhcCCCce-Ee-cC--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEE
Q 009517 428 TLEDAFNSLEGIT-CN-KA--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFR 503 (533)
Q Consensus 428 ~l~~~L~~~~g~~-~~-~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iR 503 (533)
++++.|+++ ++. .. .+ .....+.+.++.+ + .+..++.. |.++||.+.+|... .+ .||
T Consensus 299 ~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~-~-----------~~~~~~~~-L~~~gI~~~~g~~~---~~--~iR 359 (386)
T 3qm2_A 299 LLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADN-T-----------LDKVFLEE-SFAAGLHALKGHRV---VG--GMR 359 (386)
T ss_dssp HHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSG-G-----------GHHHHHHH-HHHTTEECCBCCTT---TC--SEE
T ss_pred HHHHHHHHC-CCcccCCCHHHcCceEEEEECCCc-c-----------ccHHHHHH-HHHCCCEEeCCCCC---cC--eEE
Confidence 999999988 652 21 11 1222222223211 1 12333333 67889999887543 22 599
Q ss_pred EEec--CCcCcHHHHHHHHHHHHHH
Q 009517 504 CTIL--PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 504 is~~--~~~e~i~~~~~~l~~~l~~ 526 (533)
+|+. .++++|+.+++.|+++.++
T Consensus 360 iS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 360 ASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 9996 7899999999999888765
No 233
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.72 E-value=2.3e-16 Score=158.66 Aligned_cols=311 Identities=14% Similarity=0.159 Sum_probs=196.8
Q ss_pred CCHHHHHHHHHHHhcCCCCCcccc--CC-----CcccHHHHHHHHHHHHhhcCCCCC-CCCEEE-cCChHHHHHHHHHHh
Q 009517 140 FSADSIERAWQILDQIPGRATGAY--SH-----SQGIKGLRDTIAAGIEARDGFPAD-PNDIFL-TDGASPAVHMMMQLL 210 (533)
Q Consensus 140 ~p~~v~~~~~~~~~~~~~~~~~~Y--~~-----~~G~~~lr~aia~~~~~~~g~~~~-~~~i~~-t~G~~~al~~~~~~l 210 (533)
+|++|++++.+.+.+..+.....| .. ..-+.+.|+.++++++ ++ +++|++ |.|+|++++.++..+
T Consensus 16 ~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~------~~~~~~v~f~t~~~T~a~n~~~~~~ 89 (361)
T 3m5u_A 16 LPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE------LNDDYEVLFLQGGASLQFAMIPMNL 89 (361)
T ss_dssp CCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCcHHHHHHHHHHhc
Confidence 389999999887753221111111 11 1124556667777764 43 447887 999999999999998
Q ss_pred ccCCCCeEE-EcCCcCcc-hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCC
Q 009517 211 IRSENDGIL-CPIPQYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (533)
Q Consensus 211 ~~~~gd~Vl-v~~p~~~~-~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s 288 (533)
. +||++. +....|.. +...++..|.++..++.+....+.++++. + |++ ++++|.+++..|.||++.+
T Consensus 90 ~--~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~------~t~lv~~~~~e~~tG~~~~ 158 (361)
T 3m5u_A 90 A--LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSD------NADYAYICSNNTIYGTQYQ 158 (361)
T ss_dssp C--CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCT------TSSEEEEESEETTTTEECS
T ss_pred C--CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCC------CCCEEEEeCCCCCcceeCC
Confidence 7 577653 33333332 33455667999999998876433245555 3 654 7999999988899999876
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecC
Q 009517 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (533)
Q Consensus 289 ~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~ 368 (533)
. +++ +|+++++|.+++- |..+ .++ .+. -+++.|-.|.+ |++|+ |++++
T Consensus 159 ~--------i~~-~~~~~~vD~~q~~----g~~~-id~-----------~~~-d~~~~s~~K~~-gp~G~--g~l~~--- 206 (361)
T 3m5u_A 159 N--------YPK-TKTPLIVDASSDF----FSRK-VDF-----------SNI-ALFYGGVQKNA-GISGL--SCIFI--- 206 (361)
T ss_dssp S--------CCC-CSSCEEEECGGGT----TSSC-CCC-----------TTE-EEEEEETTTTS-SCTTC--EEEEE---
T ss_pred c--------ccc-cCCEEEEEccccc----CCCC-CCc-----------ccC-CEEEEechhcc-CCCcc--EEEEE---
Confidence 2 233 4999999999874 2222 111 111 25677889999 88875 66666
Q ss_pred CHHHHHHHHH-----------h--hh-ccccCChHHHHHHHHHcCCCCCCChhHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 009517 369 SAEVREQIYK-----------V--AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAE--RDGILSSLARRAKTLEDA 432 (533)
Q Consensus 369 ~~~~~~~l~~-----------~--~~-~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ 432 (533)
.+++.+.+.+ . .. ...+++..+.+++..+|+ ...++ ++.+.++.++.++++++.
T Consensus 207 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~----------~l~~~gG~~~i~~~~~~l~~~l~~~ 276 (361)
T 3m5u_A 207 RKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMD----------WLLNQGGLDKVHEKNSQKATMLYEC 276 (361)
T ss_dssp EHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH----------HHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHH----------HHHHccCHHHHHHHHHHHHHHHHHH
Confidence 7888766643 1 01 223456666666666653 11222 577788889999999999
Q ss_pred HhcCCCc-eEec-C--CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEEcCCCCCCCCCCceEEEEec-
Q 009517 433 FNSLEGI-TCNK-A--EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTIL- 507 (533)
Q Consensus 433 L~~~~g~-~~~~-~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~g~~~iRis~~- 507 (533)
|++++|+ .... + .....+.+.++.-.+ -+..+. ..|.++||.+.+|... .+ .||+|+.
T Consensus 277 L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~-----------~~~~~~-~~L~~~gI~~~~g~~~---~g--~iRiS~~~ 339 (361)
T 3m5u_A 277 IDLSNGFYKGHADKKDRSLMNVSFNIAKNKD-----------LEPLFV-KEAEEAGMIGLKGHRI---LG--GIRASIYN 339 (361)
T ss_dssp HHTSTTSEEESSCGGGBCSSEEEEEESSCTT-----------HHHHHH-HHHHHTTEECCBCCTT---TC--SEEEECCT
T ss_pred HHHCCCeeeccCCHHHcCCeEEEEECCCchh-----------hhHHHH-HHHHHCCCEEecCCCc---cC--eEEEEccC
Confidence 9999666 4432 1 111122222221000 022333 5667889999887542 22 5999996
Q ss_pred -CCcCcHHHHHHHHHHHHHH
Q 009517 508 -PQEDKIPAIVTRLTDFHKN 526 (533)
Q Consensus 508 -~~~e~i~~~~~~l~~~l~~ 526 (533)
.++++|+.+++.|+++.++
T Consensus 340 ~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 340 ALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 7899999999999887765
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.62 E-value=1.3e-13 Score=138.73 Aligned_cols=320 Identities=12% Similarity=0.066 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC--C-CCeEEEcCCcCcchHHHHHHhCCeEEEEecCC
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS--E-NDGILCPIPQYPLYSASIALHGGTLVPYYLDE 246 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~-gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~ 246 (533)
..|.+.++.-+-+..|++. ....++++|+|.++..++.+.+.. | +|+|+++..++.....++...|++++.++...
T Consensus 115 ~~ltn~l~ld~L~~~G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~ 193 (501)
T 3hl2_A 115 NKITNSLVLDIIKLAGVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL 193 (501)
T ss_dssp HHHHHHHHHHHHHHTTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEE
T ss_pred HHHHHHHHHHHHHHcCCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeee
Confidence 3444444443334457552 235889999997776666666522 2 49999999999999999999999999887632
Q ss_pred -CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCCcc
Q 009517 247 -ATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (533)
Q Consensus 247 -~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~ 324 (533)
++.+++|++.++++|+++ +.+..++++. .+.|..|++-+ +++|+++|++||+++++|++|...... ..
T Consensus 194 d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~----~~ 263 (501)
T 3hl2_A 194 EGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSK----CM 263 (501)
T ss_dssp ETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHH----HH
T ss_pred cccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhh----hh
Confidence 225789999999999986 2233344444 55665556555 999999999999999999999763210 01
Q ss_pred cHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhc-cccCChHHHHHHHHHcCCCCC
Q 009517 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV-NLCSNISGQILASLVMSPPKV 403 (533)
Q Consensus 325 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~a~~~~L~~~~~ 403 (533)
.+..-...++ ..| +++.|..|++. ++ +..|.+.. .++++++.+...... .++.+.+...++...+
T Consensus 264 ~lp~sA~~~G--rAD---~vVqS~HK~ll-vp-IGG~ii~~--~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~l----- 329 (501)
T 3hl2_A 264 HLIQQGARVG--RID---AFVQSLDKNFM-VP-VGGAIIAG--FNDSFIQEISKMYPGRASASPSLDVLITLLSL----- 329 (501)
T ss_dssp HHHHHHHHHS--CCC---EEEEEHHHHHC-CC-SSCEEEEE--SCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHH-----
T ss_pred hhHHHHHhcC--CCc---EEEecccccce-ee-cCceEEEe--CCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH-----
Confidence 1111111221 145 67999999873 22 23333333 477777776544321 1222222233333332
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceEec---CCceeEEecccCCCHHHHHHHHhcCCCChHHHHH
Q 009517 404 GDESYESYCAERDGILSSLARRAKTLEDAFNSL---EGITCNK---AEGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCR 477 (533)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (533)
..+.++++.++..++.++|.+.|+++ -|-++.. ....+-+.++- +... .......+-
T Consensus 330 -------Gr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~-~~~~---------~~~~~t~~g 392 (501)
T 3hl2_A 330 -------GSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKT-LDEH---------RDKAVTQLG 392 (501)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTT-SCTT---------TSCHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccc-cccc---------ccccHHHHH
Confidence 22334566666667777777777764 1323322 22233333210 1000 001122222
Q ss_pred HHHHccce---E-EEcCC----------CCCCCC---CCceEEEEec--CCcCcHHHHHHHHHHHHHHHHHHh
Q 009517 478 RLLNATGI---V-LVPGS----------GFGQVP---GTWHFRCTIL--PQEDKIPAIVTRLTDFHKNFMDKF 531 (533)
Q Consensus 478 ~ll~~~gV---~-v~pg~----------~f~~~~---g~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~~~ 531 (533)
.+|-.++| - |.+|. .||... ...|+-++.+ .+.+||+.++++|++++++++++.
T Consensus 393 s~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 393 SMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp HHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 33433444 2 34555 565421 1237777775 899999999999999999987653
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.54 E-value=3.6e-12 Score=130.11 Aligned_cols=244 Identities=11% Similarity=0.049 Sum_probs=151.2
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHhcc--CCCCeEEEcCCcCcchHHHHHHhCCeEEEEec
Q 009517 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIR--SENDGILCPIPQYPLYSASIALHGGTLVPYYL 244 (533)
Q Consensus 168 G~~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~~~~l~~--~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~ 244 (533)
+...+.+.+..++.+..|.+- ....++++|+| .++..++.++.. .+++.|+++..+|.....++...|+.++.++.
T Consensus 95 ~~~~~e~~~~~~~~~~lGlp~-~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 95 LLNKITNSLVLNVIKLAGVHS-VASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCCC-CceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence 355677788888877777432 23458888887 555555555431 13789999999999999999999999888865
Q ss_pred CC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccccCCCC
Q 009517 245 DE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (533)
Q Consensus 245 ~~-~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p-~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~~~~~~~ 322 (533)
.. +..+.+|++.|+++|++.. .+.+++++.+| .+.+|.+-+ +++|+++|++||+++++|++|.....
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~---~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~----- 242 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELG---PEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSS----- 242 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHC---GGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCH-----
T ss_pred eecCccCCcCHHHHHHHHHhcC---CCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhh-----
Confidence 32 2356899999999998852 12345555655 455677766 99999999999999999999976321
Q ss_pred cccHHHHHhhcCC-CCCCceEEEEecCCccCCCCCCCeeEEEEEecCCHHHHHHHHHhhhccccCChHHHHHHHHHcCCC
Q 009517 323 FHSFKKVSRSMGY-GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPP 401 (533)
Q Consensus 323 ~~~~~~~~~~~~~-~~~~~~vi~i~S~SK~~~gl~G~riG~v~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~~L~~~ 401 (533)
+ ...+...... ...| .++.|..|++.. -...+++.. .+++.++++....... .....+..+...++.
T Consensus 243 ~--~~~l~~~a~~~~~AD---~~v~S~HK~l~a--~~~~~~l~~--rd~~~~~~~~~~~~g~-~s~SpsL~l~~~l~~-- 310 (450)
T 3bc8_A 243 K--CMHLIQQGARVGRID---AFVQSLDKNFMV--PVGGAIIAG--FNEPFIQDISKMYPGR-ASASPSLDVLITLLS-- 310 (450)
T ss_dssp H--HHHHHHHHHHHSCCC---EEEEEHHHHHSC--CSSCEEEEE--SCHHHHHHHHHHSCSC-BCSHHHHHHHHHHHH--
T ss_pred h--hHhHHHHHhcccCCC---EEEECCccCCCc--hhccEEEEe--cCHHHHHHHHHHhhcC-CcccHHHHHHHHHHH--
Confidence 0 1111111100 0235 568899998743 344555554 3677776665433111 111222222222221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEec
Q 009517 402 KVGDESYESYCAERDGILSSLARRAKTLEDAFNSLE---GITCNK 443 (533)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~ 443 (533)
.-.+.++++.++..++.+++++.|++++ |..+..
T Consensus 311 --------~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~ 347 (450)
T 3bc8_A 311 --------LGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ 347 (450)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC
Confidence 1122234444455666677777776665 665543
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.53 E-value=2.7e-12 Score=128.75 Aligned_cols=332 Identities=13% Similarity=0.074 Sum_probs=194.4
Q ss_pred CHHHHHHHHHHHhcCCCCC---ccccCCCcccHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHHHhccCCC
Q 009517 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSEN 215 (533)
Q Consensus 141 p~~v~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~g 215 (533)
.+.|.++.-..+.+....+ ...|+-..-+.++.....+...+.||.+...- ||-.-+ ++.|...++.+++ +||
T Consensus 67 S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~S-Gs~AN~avy~All-~PG 144 (490)
T 3ou5_A 67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYS-GSPANLAVYTALL-QPH 144 (490)
T ss_dssp CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSS-HHHHHHHHHHHHC-C-C
T ss_pred CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCC-HHHHHHHHHHHHc-CCC
Confidence 5777777766665533211 11233344345566666667777778443211 455544 5588888888898 899
Q ss_pred CeEEEcCCcCcchHHH--------HHHhCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc
Q 009517 216 DGILCPIPQYPLYSAS--------IALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~--------~~~~g~--~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~ 285 (533)
|+|+..+....+|..- ....|. +.++|+++++ +..+|.+.+++..+.. ++|+|+.-.-.+|-
T Consensus 145 D~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~-----kPklIi~G~SaY~r-- 216 (490)
T 3ou5_A 145 DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAYAR-- 216 (490)
T ss_dssp CCEECBC----------------------------CBCEETT-TTEECHHHHHHHHHHH-----CCSEEEECCSSCCS--
T ss_pred CEEEecccCCCCcccccccCCCcccccccccccccccccCCC-CCcccHHHHHHHHhhc-----CCCeEEECCccCcc--
Confidence 9999999887776421 122222 4556666654 5579999999999987 89988866555553
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccc-ccccccCCCCcccHHHHHhhcCCCCCCceEEEEecCCccCCCCCCCeeEEEE
Q 009517 286 VLAEENQRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (533)
Q Consensus 286 ~~s~~~l~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~gl~G~riG~v~ 364 (533)
.++ ++++.++|++.|.++++|-++ .+++-+|. +++... +.| |+..|..|+| .|-|.|.|.
T Consensus 217 ~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~--~psP~~--------~AD---vVTtTTHKTL---rGPrGG~Il 277 (490)
T 3ou5_A 217 LID---YARMREVCDEVKAHLLADMAHISGLVAAKV--IPSPFK--------HAD---IVTTTTHKTL---RGARSGLIF 277 (490)
T ss_dssp CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTS--SCCGGG--------TCS---EEEEESSSTT---CSCSCEEEE
T ss_pred ccC---HHHHHHHHhhcccEEEechhhhhhhhcccc--cCCccc--------cce---EEeccccccc---cCCCceEEE
Confidence 333 899999999999999999998 55555443 333222 245 6788999998 488999988
Q ss_pred EecC-----CH-------HHHHHHHHhhh-ccccCChHHHHHH-HHHcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009517 365 VTGF-----SA-------EVREQIYKVAS-VNLCSNISGQILA-SLVMSPPKVGDESYESYCAERDGILSSLARRAKTLE 430 (533)
Q Consensus 365 ~~~~-----~~-------~~~~~l~~~~~-~~~~~~~~~q~a~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 430 (533)
+... ++ ++.+.+.+.-- ...+.+..-..|+ +.++. +....+.+.-.++..++.+.|.
T Consensus 278 ~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~---------Ea~~p~fk~Ya~qVv~NAkaLA 348 (490)
T 3ou5_A 278 YRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALK---------QACTPMFREYSLQVLKNARAMA 348 (490)
T ss_dssp EECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHH---------HHHSHHHHHHHHHHHHHHHHHH
T ss_pred eccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHH---------HHHhHhHHHHHHHHHHHHHHHH
Confidence 7210 00 45566655432 2222222222222 22221 1122334555566778888999
Q ss_pred HHHhcCCCceEecC-CceeEEecccCCCHHHHHHHHhcCCCChHHHHHHHHHccceEEE----cCCCCCCCCCCceEEEE
Q 009517 431 DAFNSLEGITCNKA-EGAMYLFPRIQLPEKAIKAAEAEKTVPDAFYCRRLLNATGIVLV----PGSGFGQVPGTWHFRCT 505 (533)
Q Consensus 431 ~~L~~~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~g~~~iRis 505 (533)
+.|.+. |++++.. .....+++++.. .+++ -..+.++|++.||.+. |+..- +-....|||.
T Consensus 349 ~~L~~~-G~~vvsGgTdnHlvLvDl~~----------~g~t--G~~ae~~Le~agItvNkN~iP~D~s--p~~~SGiRiG 413 (490)
T 3ou5_A 349 DALLER-GYSLVSGGTDNHLVLVDLRP----------KGLD--GARAERVLELVSITANKNTCPGDRS--AITPGGLRLG 413 (490)
T ss_dssp HHHHHT-TCEEGGGSCSSSEEEEECGG----------GTCC--HHHHHHHHHHTTEECEEECCTTCCC--SSSCSEEEEE
T ss_pred HHHHhC-CCeeecCCCCceEEEEeccc----------cCCC--HHHHHHHHHHcCcEECCCCCCCCCC--CCCCCeeEEC
Confidence 999888 9988753 333445555541 1121 2235578899999875 44311 1112369999
Q ss_pred e------cCCcCcHHHHHHHHHHHHH
Q 009517 506 I------LPQEDKIPAIVTRLTDFHK 525 (533)
Q Consensus 506 ~------~~~~e~i~~~~~~l~~~l~ 525 (533)
. +..+++++++.+-|.+++.
T Consensus 414 Tpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 414 APALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 8 2677889999999988775
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.85 E-value=5.3 Score=37.48 Aligned_cols=101 Identities=20% Similarity=0.195 Sum_probs=61.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
.-+++|.|++..-..+.+.|. ..|-.|++..-.-.......+..|.+...+..|-. |.+++++.++...+.-.+
T Consensus 30 KvalVTGas~GIG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFV-AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA-----NLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 345555555444455555565 67888887665444455566677888888877643 677777777664332224
Q ss_pred eeEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 271 VRALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 271 ~~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
... +++|. .++.+ ..++.++|+++.++
T Consensus 104 iDi-LVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 104 IDV-LFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EEE-EEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCE-EEECCCCCCCCChhhccHHHHHHHHHH
Confidence 554 45555 33333 25688889888775
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=82.04 E-value=7.2 Score=35.70 Aligned_cols=103 Identities=16% Similarity=0.066 Sum_probs=59.5
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|-+|++..-.-..........+.++..+..|-. |.+.+++.++...+...
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLA-ADGATVIVSDINAEGAKAAAASIGKKARAIAADIS-----DPGSVKALFAEIQALTG 79 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHHCC
Confidence 3456666655555555666666 67888887665444445555556777777776633 67787777765433222
Q ss_pred CeeEEEEeCCCCCCc--cCCCHHHHHHHHHH
Q 009517 270 TVRALVVINPGNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 270 ~~~~iil~~p~NPtG--~~~s~~~l~~i~~l 298 (533)
+...++-+--..+.+ ...+.++|+++.+.
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455554332222322 24577777776553
No 239
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=79.83 E-value=16 Score=33.71 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=62.1
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
++-..+++|.|+...-..+.+.|. +.|-+|++..-.-.... ..+...|.++..+..|-. |.+++++.++..
T Consensus 7 L~gKvalVTGas~GIG~aia~~la-~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~ 80 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLA-AAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKL 80 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHH
Confidence 333445555555544455555565 68888888654322222 234456888888877643 788888888776
Q ss_pred HhcCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 265 KAKGITVRALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 265 ~~~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
.+...+...+ ++|. .++.+ ..++.++|+++.++
T Consensus 81 ~~~~G~iDiL-VNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 81 DAEGIHVDIL-INNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HHTTCCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 5544455544 5655 22222 25688888887764
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=79.26 E-value=13 Score=34.75 Aligned_cols=102 Identities=19% Similarity=0.160 Sum_probs=58.9
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
....+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.++...+..
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFA-KNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVS-----SAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHHc
Confidence 33456666655555555566666 57878877664433444455556777777777633 6788877776543222
Q ss_pred CCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 100 g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 100 GRVDVLV-NNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp SCCCEEE-ECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 2455444 4442 2222 2467777776654
No 241
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=79.09 E-value=26 Score=31.90 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=58.5
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++...+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFA-AEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADA 80 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHh
Confidence 3456666666555555666666 578777776544333333 33445778888887643 78888887776544
Q ss_pred cCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
. .+...++ ++. ..+.+ ...+.++|+++.+
T Consensus 81 ~-g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 81 H-APLEVTI-FNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp H-SCEEEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred h-CCceEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 3 3565554 444 22222 2466677776554
No 242
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=78.84 E-value=14 Score=33.94 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=59.5
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|- -|.+.+++.++...+...
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYV-REGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 3456776666555555666666 5787887766544444455555666777777663 367888887776533333
Q ss_pred CeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
+...++-+--..+.+ ...+.++|+++.+
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 555555332222222 2456777776554
No 243
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=78.05 E-value=14 Score=34.12 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=53.2
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
....+++|.|+...-..+.+.|. ..|.+|++..-.-......+...+... +..|- -|.+.+++.++...+..
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~Dv-----~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLL-EHGHRVIISYRTEHASVTELRQAGAVA--LYGDF-----SCETGIMAFIDLLKTQT 97 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHH-HTTCCEEEEESSCCHHHHHHHHHTCEE--EECCT-----TSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHhcCCeE--EECCC-----CCHHHHHHHHHHHHHhc
Confidence 34567776666555555666666 567677766544333444555556544 44432 26777777776653333
Q ss_pred CCeeEEEEeCCC--CCCccCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPG--NPTGQVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~--NPtG~~~s~~~l~~i~~ 297 (533)
.+...+| ++.. .+.....+.++|+++.+
T Consensus 98 g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 98 SSLRAVV-HNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp SCCSEEE-ECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCccCCCCCCCCHHHHHHHHH
Confidence 3455554 4432 22223445555665544
No 244
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=77.10 E-value=11 Score=35.29 Aligned_cols=101 Identities=15% Similarity=0.066 Sum_probs=56.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.++...+...+
T Consensus 30 k~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLA-DEGCHVLCADIDGDAADAAATKIGCGAAACRVDVS-----DEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTT-----CHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 345665555444455555665 57878877654433444455555767777776533 677777777654322224
Q ss_pred eeEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 271 VRALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 271 ~~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
...++ ++. ..+.+ ...+.++|+++.+.
T Consensus 104 iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 104 VDKLV-ANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp CCEEE-ECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 55554 443 22222 24577777776553
No 245
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=77.02 E-value=14 Score=33.87 Aligned_cols=102 Identities=14% Similarity=0.051 Sum_probs=58.8
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|-+|++..-.-..........+.++..+..|-. |.+.+++.++...+...
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLV-EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIA-----DLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC-----CHHHHHHHHHHHHHHhC
Confidence 3456777666555556666666 57878877665444444455555777777777643 67777776665422222
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
+...+ +++.. .+.+ ...+.++|++..++
T Consensus 82 ~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 82 AIDLL-HINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SEEEE-EECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 45544 44442 2222 23477777776553
No 246
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=76.77 E-value=12 Score=34.61 Aligned_cols=101 Identities=11% Similarity=0.098 Sum_probs=56.5
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|..|++..-.-..........|.++..+..|-. |.+.+++.++...+...
T Consensus 27 gk~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFH-AQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLS-----DRKSIKQLAEVAEREME 100 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT-----SHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecC-----CHHHHHHHHHHHHHHcC
Confidence 3456666555554555556666 67877877654444445555666878888877643 67777777765432222
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 101 ~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 101 GIDILV-NNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp SCCEEE-ECCCCC-----CCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 455554 4442 2222 2345556665544
No 247
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=76.77 E-value=12 Score=34.40 Aligned_cols=101 Identities=19% Similarity=0.099 Sum_probs=49.4
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|-+|++..-.-..........+.++..+..|- -|.+.+++.++.......
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLA-QEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALAFAKQEFG 80 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 3446666655555555556666 5787787766444444444444566666666653 267777777765432222
Q ss_pred CeeEEEEeCCC-CCCcc------CCCHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTGQ------VLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG~------~~s~~~l~~i~~ 297 (533)
+...++ ++.. .+.+. ..+.++|++..+
T Consensus 81 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 81 HVHGLV-NCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CCCEEE-ECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCccccccccCCHHHHHHHHH
Confidence 455444 4442 22221 356677776654
No 248
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=76.46 E-value=15 Score=33.60 Aligned_cols=103 Identities=17% Similarity=0.081 Sum_probs=58.6
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
....+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.++...+..
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFA-KGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAVEAALSKF 81 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHhc
Confidence 33456666665554555566666 57877877665444445555566777777777643 6777777776543222
Q ss_pred CCeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
.+...+|.+-- ..+.+ ...+.+++++..+
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 24555544322 22122 2347677776554
No 249
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=75.60 E-value=26 Score=31.67 Aligned_cols=102 Identities=11% Similarity=0.112 Sum_probs=57.8
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. +.|.+|++..-.-.... ..++..|.++..+..|-. |.+.+++.++....
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALA-SKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNIS-----DIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHH
Confidence 3456666655555555566666 57877776654332222 233445777877777643 78888888877544
Q ss_pred cCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+|.+--..+.+ ...+.+++++..+
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 444556555442222222 2456677766554
No 250
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=75.09 E-value=13 Score=33.59 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=54.6
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-..........+..+..+..|-. |.+.+++.++...+...+.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLV-ERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLA-----HHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----SHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCC-----CHHHHHHHHHHHHHhcCCC
Confidence 45666555554555556665 57878877654433344444444445666766533 6777777776543322245
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 009517 272 RALVVINPGNPTGQ--VLAEENQRAIVDF 298 (533)
Q Consensus 272 ~~iil~~p~NPtG~--~~s~~~l~~i~~l 298 (533)
..++-+--..+.+. ..+.++|+++.+.
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 55554432222221 4577777776553
No 251
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=75.03 E-value=12 Score=34.85 Aligned_cols=100 Identities=18% Similarity=0.095 Sum_probs=55.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC------------c---chHHHHHHhCCeEEEEecCCCCCCCCCHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY------------P---LYSASIALHGGTLVPYYLDEATGWGLETS 255 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~------------~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~ 255 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.. . .....+...|.++..+..|-. |.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~ 84 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLA-EEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR-----DRA 84 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT-----CHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC-----CHH
Confidence 456666665555555666666 5787777754221 0 111223445777888877643 678
Q ss_pred HHHHHHHHHHhcCCCeeEEEEeCC-CCCCccCCCHHHHHHHHH
Q 009517 256 EVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 256 ~l~~~i~~~~~~g~~~~~iil~~p-~NPtG~~~s~~~l~~i~~ 297 (533)
.+++.++...+...+...+| ++. ..+.+...+.++|++..+
T Consensus 85 ~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVV-ANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEE-ECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEE-ECCCcCcccCcCCHHHHHHHhh
Confidence 87777765433222455554 443 333334467677776654
No 252
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=74.88 E-value=21 Score=32.95 Aligned_cols=101 Identities=9% Similarity=-0.017 Sum_probs=59.1
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..........|.++..+..|-. |.+.+++.++...+.-.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLA-RAGARVVLADLPETDLAGAAASVGRGAVHHVVDLT-----NEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCC-----CHHHHHHHHHHHHHHcC
Confidence 3456666665555555666666 67878887766555666666666777777766532 67777777765432222
Q ss_pred CeeEEEEeCCC-C-C-Cc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPG-N-P-TG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~-N-P-tG--~~~s~~~l~~i~~ 297 (533)
+...++ ++.. . + .+ ...+.++|++..+
T Consensus 85 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 85 RLDIVD-NNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CCCEEE-ECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCCccccCCHHHHHHHHH
Confidence 455444 4442 2 2 11 2457777777654
No 253
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=74.78 E-value=15 Score=34.18 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=57.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.++.......+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAV-AAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVT-----DGERIDVVAADVLARYGR 79 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred cEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCC-----CHHHHHHHHHHHHHhCCC
Confidence 345666555444455556666 67888887765555566666666667777776532 677777777654322224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...++ ++.. .+.+ ...+.++++++.+
T Consensus 80 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 80 VDVLV-NNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp CSEEE-ECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CCEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 55554 4432 2222 1456666766554
No 254
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=74.40 E-value=18 Score=33.16 Aligned_cols=101 Identities=13% Similarity=0.076 Sum_probs=55.9
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++...+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFA-KAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT-----DEQHREAVIKAALD 85 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHH-HHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 3455665555544455555665 568777776543322222 23445777888877643 67777777765432
Q ss_pred cCCCeeEEEEeCC--CCCCccCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINP--GNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p--~NPtG~~~s~~~l~~i~~ 297 (533)
...+...++ ++. ..+.....+.++|++..+
T Consensus 86 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 86 QFGKITVLV-NNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHSCCCEEE-ECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCCCCCHHHHHHHHH
Confidence 222455554 444 222223567777777654
No 255
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=74.36 E-value=31 Score=31.39 Aligned_cols=82 Identities=20% Similarity=0.007 Sum_probs=47.5
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-.......+..+.++..+..|-. |.+.+++.++.......
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLV-GQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT-----SEKDVQTALALAKGKFG 85 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHHCC
Confidence 3456666655555555666666 56877776654444445555555767777776633 67777777765422222
Q ss_pred CeeEEEEe
Q 009517 270 TVRALVVI 277 (533)
Q Consensus 270 ~~~~iil~ 277 (533)
+..+||-+
T Consensus 86 ~id~li~~ 93 (265)
T 2o23_A 86 RVDVAVNC 93 (265)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEC
Confidence 45555433
No 256
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=73.78 E-value=24 Score=32.61 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=58.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
+....+++|.|+...-..+.+.|. ..|.+|++..-.-...... +...|.++..+..|- -|.+.+++.++..
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLA-VAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARL 97 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHH
Confidence 333456666655555555666666 6788888766443322222 333477777777653 3788888877765
Q ss_pred HhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.....+...++ ++.. .+.+ ...+.++|+++.+
T Consensus 98 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 98 DEQGIDVDILV-NNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HHHTCCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHCCCCCEEE-ECCCCCCCCCchhCCHHHHHHHHH
Confidence 44333555554 4432 2222 2457777777655
No 257
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=73.55 E-value=17 Score=33.57 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=58.1
Q ss_pred CCCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 187 PADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 187 ~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
++....+++|.|+...-..+.+.+. ..|.+|++..-.-.. ....+...|.++..+..|-. |.+.+++.++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 99 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLA-SMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA-----SESDFIEAIQ 99 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHH
Confidence 3444567776666555555666666 578777765432221 22334455777888877643 6777777776
Q ss_pred HHHhcCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
.......+...+|.+--..+.+ ...+.+++++..+
T Consensus 100 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 100 TIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 5433223555555442222222 2456677766554
No 258
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=73.27 E-value=25 Score=32.52 Aligned_cols=100 Identities=14% Similarity=0.005 Sum_probs=58.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. +.|.+|++..-.-..........+.++..+..|-. |.+.+++.++.. ..-.+
T Consensus 31 k~vlVTGas~GIG~aia~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~-~~~~~ 103 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLH-ADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT-----SEDSVLAAIEAA-NQLGR 103 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHH-TTSSE
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHH-HHhCC
Confidence 346666655555555666666 67878887664444445555566777777777643 788888888765 22224
Q ss_pred eeEEEEeCC-CCCCc-------cCCCHHHHHHHHH
Q 009517 271 VRALVVINP-GNPTG-------QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p-~NPtG-------~~~s~~~l~~i~~ 297 (533)
...++.++. ..+.+ ...+.+++++..+
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHH
Confidence 555554423 22222 2466666766654
No 259
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=73.15 E-value=32 Score=31.68 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=57.6
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc--hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
++-.-+++|.|++..-..+.+.|. +.|-.|++..-.-.. ....+...|.+...+..|-. |.+++++.++...
T Consensus 5 L~gKvalVTGas~GIG~aia~~la-~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLA-EERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTI 78 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHH
Confidence 333344555444444444455555 577666665433222 23344556777777777643 6777777666543
Q ss_pred hcCCCeeEEEEeCC--CCCCccCCCHHHHHHHHHH
Q 009517 266 AKGITVRALVVINP--GNPTGQVLAEENQRAIVDF 298 (533)
Q Consensus 266 ~~g~~~~~iil~~p--~NPtG~~~s~~~l~~i~~l 298 (533)
+.-.+.. ++++|. +.+.....+.++|+++.++
T Consensus 79 ~~~G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 79 ATFGRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHSCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHhCCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 2222454 445655 3344557788888887664
No 260
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=73.10 E-value=38 Score=31.48 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=58.4
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc----------chHHHHHHhCCeEEEEecCCCCCCCCCHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----------LYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~----------~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
....+++|.|+...-..+.+.|. ..|.+|++..-.-. .....+...|.++..+..|-. |.+.++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~ 81 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVA-ADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVA 81 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHH
Confidence 33456666666555555666666 67877776543322 123334556888888887643 678887
Q ss_pred HHHHHHHhcCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 259 KQLEAAKAKGITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
+.++...+...+...+| ++. ..+.+ ...+.++|+++.+
T Consensus 82 ~~~~~~~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICV-NNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHHHSCCSEEE-ECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 77765433222455554 443 22222 2467777777655
No 261
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=72.93 E-value=33 Score=32.14 Aligned_cols=102 Identities=12% Similarity=0.149 Sum_probs=56.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh---C-CeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH---G-GTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~---g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
...+++|.|+...-..+.+.|. ..|-+|++..-.-.......... + .++..+..|-. |.+.+++.++...
T Consensus 41 ~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 114 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFA-RAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVS-----DPGSCADAARTVV 114 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCC-----CHHHHHHHHHHHH
Confidence 3445666555554455556666 57877877664444444433332 3 46667776633 6777777776543
Q ss_pred hcCCCeeEEEEeCC-CCCCcc--CCCHHHHHHHHHH
Q 009517 266 AKGITVRALVVINP-GNPTGQ--VLAEENQRAIVDF 298 (533)
Q Consensus 266 ~~g~~~~~iil~~p-~NPtG~--~~s~~~l~~i~~l 298 (533)
+.-.+...+| ++. ..+.+. ..+.++|+++.++
T Consensus 115 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 115 DAFGALDVVC-ANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 2222455554 444 222222 4577777776653
No 262
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=72.26 E-value=21 Score=32.96 Aligned_cols=101 Identities=8% Similarity=0.058 Sum_probs=59.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.-+++|.|++..-..+.+.|. ..|-.|++.+-.-... ...++..|.++..+..|-. |.+++++.++...+.
T Consensus 8 KvalVTGas~GIG~aiA~~la-~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFET 81 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 345555544444444455555 6787887765432222 2334556888888887743 778888777665332
Q ss_pred CCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 268 GITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 268 g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
-.+.. ++++|.. .+.+ ..++.++|+++.++
T Consensus 82 ~G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 82 YSRID-VLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HSCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred cCCCC-EEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 22444 4556653 3333 35788889988775
No 263
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=71.98 E-value=31 Score=31.25 Aligned_cols=100 Identities=18% Similarity=0.096 Sum_probs=53.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC-cchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~-~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.- ......+...|.++..+..|-. |.+.+++.++...+.-.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFA-VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS-----QPGDVEAFGKQVISTFG 81 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHHHHHcC
Confidence 346666655555555566666 5787777654322 2222234445767777776533 67777777665422212
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 82 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 82 RCDILV-NNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 455554 4432 2222 2356677766554
No 264
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=71.84 E-value=20 Score=32.62 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=55.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.+...+..|- -|.+.+++.++...+...
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLA-ERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 3456666655554555556666 6787887765443333444444555556666653 367888777765432222
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+...++ ++.. .+.+ ...+.++|+++.+
T Consensus 83 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVDILV-NNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 455444 4442 2222 2457777777654
No 265
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=70.90 E-value=20 Score=33.12 Aligned_cols=103 Identities=16% Similarity=0.125 Sum_probs=55.8
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc----chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~----~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
....+++|.|+...-..+.+.|. ..|.+|++..-.-. .....+...|.++..+..|-. |.+.+++.++..
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----d~~~v~~~~~~~ 100 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELA-AAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS-----QESEVEALFAAV 100 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHH
Confidence 33456666555555555566666 57877776432111 122233445777887877643 678887777654
Q ss_pred HhcCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 265 KAKGITVRALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 265 ~~~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
.+...+...+| ++. ..+.+ ...+.++|+++.++
T Consensus 101 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 101 IERWGRLDVLV-NNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 32222455554 444 22222 24577777776553
No 266
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=70.00 E-value=32 Score=31.71 Aligned_cols=100 Identities=20% Similarity=0.146 Sum_probs=54.0
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++...+..
T Consensus 6 ~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELG-VAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT-----DRHSVAAFAQAAVDTW 79 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 35555544444444555565 578777776533222222 23344778887777633 6778777776543222
Q ss_pred CCeeEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 269 ITVRALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 269 ~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
.+...+| ++. ..+.+ ...+.++|+++.++
T Consensus 80 g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 80 GRIDVLV-NNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp SCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 2455554 444 22222 24577777766553
No 267
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=69.95 E-value=36 Score=31.49 Aligned_cols=101 Identities=14% Similarity=0.153 Sum_probs=56.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-....... ...|.++..+..|-. |.+.+++.++....
T Consensus 28 k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFM-RHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALK 101 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 446666655555555666666 67877777654332222222 234777888877643 67777777765432
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
...+...+| ++.. ...+ ...+.++|+++.++
T Consensus 102 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 102 EFGRIDILI-NCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCcCCCCCCcccCCHHHHHHHHHH
Confidence 222455554 4442 2212 23577777776553
No 268
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=69.46 E-value=32 Score=31.27 Aligned_cols=100 Identities=18% Similarity=0.087 Sum_probs=53.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|- -|.+.+++.++.......+
T Consensus 7 k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLL-GEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 345666555444455555665 5787777765432223333344466666666653 2677777777654222224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+| ++.. .+.+ ...+.++|+++.+
T Consensus 81 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 81 LNVLV-NNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 55554 4432 2222 2356666766554
No 269
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=68.76 E-value=55 Score=31.54 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=55.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc----------chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQ 260 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~----------~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~ 260 (533)
..++||.|+...-..+.+.|. ..|-+|++..-.-. .....+...|.++..+..|-. |.+.+++.
T Consensus 46 k~vlVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~ 119 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAA-KDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR-----DEQQISAA 119 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHH-HCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHH
Confidence 345665555444455556666 67877776543322 123344556888888877643 77888877
Q ss_pred HHHHHhcCCCeeEEEEeCCC-C-CCc-cCCCHHHHHHHHH
Q 009517 261 LEAAKAKGITVRALVVINPG-N-PTG-QVLAEENQRAIVD 297 (533)
Q Consensus 261 i~~~~~~g~~~~~iil~~p~-N-PtG-~~~s~~~l~~i~~ 297 (533)
++...+...+...+| ++.. . +.. ...+.++|+++.+
T Consensus 120 ~~~~~~~~g~iDilV-nnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 120 VEKAIKKFGGIDILV-NNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 776533222455554 4442 2 211 3456677766543
No 270
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=68.72 E-value=70 Score=29.16 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=56.6
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc---ch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP---LY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~---~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
....+++|.|+...-..+.+.|. ..|.+|++..-.-. .. ...+...|.++..+..|-. |.+.+++.++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFA-LESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS-----NEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHT-TSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCC-----SHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHH
Confidence 33456666665555555666666 67878777432111 11 2223334778888887643 6788887776
Q ss_pred HHHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 84 ~~~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 84 FAEKEFGKVDIAI-NTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp HHHHHHCSEEEEE-ECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 5433222455554 4442 2222 2457777777655
No 271
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=68.57 E-value=21 Score=32.70 Aligned_cols=99 Identities=18% Similarity=0.116 Sum_probs=56.4
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.|++|.|++..-..+.+.|. +.|-+|++.+-.-.... .+...+.+...+..|-. |.+++++.++...+.-.+.
T Consensus 4 ~vlVTGas~GIG~aia~~la-~~Ga~V~~~~~~~~~~~-~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSA-DFAKERPNLFYFHGDVA-----DPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHH-HHHTTCTTEEEEECCTT-----SHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHH-HHHHhcCCEEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 46666666555555566666 67888877654322222 22334556777776533 6777777776543322245
Q ss_pred eEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 272 RALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 272 ~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
.. +++|. .++.+ ..++.++|+++.++
T Consensus 77 Di-LVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 77 DV-LVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CE-EEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44 45655 23333 35678888887764
No 272
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=68.53 E-value=47 Score=30.31 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=55.0
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
...+++|.|+...-..+.+.|. ..|.+|++. ...-.... ..+...|.++..+..|-. |.+.+++.++...
T Consensus 8 ~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 81 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLT-----NAAEVEAAISAAA 81 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHH
Confidence 3456666655555555666666 578777765 33322222 223334667777776633 6788877776543
Q ss_pred hcCCCeeEEEEeCCC-C-CCc--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG-N-PTG--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~-N-PtG--~~~s~~~l~~i~~ 297 (533)
+...+...++ ++.. . +.+ ...+.++|+++.+
T Consensus 82 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 82 DKFGEIHGLV-HVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHHCSEEEEE-ECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCEEE-ECCCccCCCCChhhCCHHHHHHHHH
Confidence 3222455554 4432 1 222 2557777776654
No 273
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=68.21 E-value=21 Score=32.92 Aligned_cols=100 Identities=15% Similarity=0.089 Sum_probs=54.2
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC-cCc---chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-~~~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..- .-. .....+...|.++..+..|-. |.+.+++.++...+
T Consensus 19 k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR-----QVPEIVKLFDQAVA 92 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345665555444455556666 57877776422 111 122334446778888877643 67888777765432
Q ss_pred cCCCeeEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG~--~~s~~~l~~i~~ 297 (533)
...+...+| ++.. .+.+. ..+.++|++..+
T Consensus 93 ~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 93 HFGHLDIAV-SNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHSCCCEEE-CCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 222455444 4442 22222 347777777655
No 274
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=67.66 E-value=37 Score=31.18 Aligned_cols=100 Identities=20% Similarity=0.173 Sum_probs=53.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-....... ...|.++..+..|-. |.+.+++.++...+
T Consensus 22 k~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLA-EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS-----NYEEVKKLLEAVKE 95 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 446666555555555566666 57877777543322222222 233777777776533 67777777765422
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.-.+..++| ++.. ...+ ...+.++|+++.+
T Consensus 96 ~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 96 KFGKLDTVV-NAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 212455554 4432 2222 2356677776654
No 275
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=67.43 E-value=50 Score=29.67 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=52.4
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...|++|.|+...-..+.+.|. ..|.+|++..-.-.... ..+...+.++..+..|- -|.+.+++.++....
T Consensus 11 ~~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFAIS 84 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3456666555444555666666 67877776543222111 12233466676666653 267888877765322
Q ss_pred cCCCeeEEEEeCCC-CCCccCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTGQVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG~~~s~~~l~~i~~ 297 (533)
...+...||-+-.. .+.....+.+++++..+
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 22245555544222 22222456666655443
No 276
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=67.32 E-value=25 Score=32.56 Aligned_cols=100 Identities=18% Similarity=0.109 Sum_probs=55.1
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.+++|.|+...-..+.+.|. ..|-+|++..-.-..........+.++..+..|-. |.+.+++.++.......+.
T Consensus 30 ~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALA-GAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT-----DPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTT-----SHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34555444444444555565 57878877654433444555556666666766532 6777777776543222245
Q ss_pred eEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 272 RALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 272 ~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
..+| ++.. .+.+ ...+.++|+++.++
T Consensus 104 D~lV-nnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 104 DVLF-NNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CEEE-ECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 5544 4442 2222 24577777776553
No 277
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=67.31 E-value=23 Score=32.89 Aligned_cols=101 Identities=18% Similarity=0.175 Sum_probs=54.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc-----------Cc-----chH---HHHHHhCCeEEEEecCCCCCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-----------YP-----LYS---ASIALHGGTLVPYYLDEATGW 250 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~-----------~~-----~~~---~~~~~~g~~~~~v~~~~~~~~ 250 (533)
...+++|.|+...-..+.+.|. ..|.+|++.+-. +. ... ..+...+.++..+..|-.
T Consensus 11 ~k~~lVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--- 86 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLA-QEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR--- 86 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT---
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC---
Confidence 3456666655555555566666 678777765322 00 111 222334677777777643
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEeCCC-CCCc---cCCCHHHHHHHHH
Q 009517 251 GLETSEVKKQLEAAKAKGITVRALVVINPG-NPTG---QVLAEENQRAIVD 297 (533)
Q Consensus 251 ~ld~~~l~~~i~~~~~~g~~~~~iil~~p~-NPtG---~~~s~~~l~~i~~ 297 (533)
|.+.+++.++...+...+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 87 --~~~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 87 --DYDALKAAVDSGVEQLGRLDIIV-ANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp --CHHHHHHHHHHHHHHHSCCCEEE-ECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHhCCCCEEE-ECCcccCCCCccccCCHHHHHHHHH
Confidence 67888777765432222455444 4442 2222 2357777777655
No 278
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=67.31 E-value=27 Score=32.80 Aligned_cols=102 Identities=12% Similarity=0.109 Sum_probs=55.6
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc------------Ccc---hHHHHHHhCCeEEEEecCCCCCCCCCH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ------------YPL---YSASIALHGGTLVPYYLDEATGWGLET 254 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~------------~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~ 254 (533)
...+++|.|+...-..+.+.|. ..|..|++.+-. -.. ....+...|.++..+..|-. |.
T Consensus 28 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~ 101 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLA-REGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR-----DF 101 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC-----CH
Confidence 3456666555554455555665 578777765322 001 12233445778888887643 67
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEeCCC-CCCc---cCCCHHHHHHHHHH
Q 009517 255 SEVKKQLEAAKAKGITVRALVVINPG-NPTG---QVLAEENQRAIVDF 298 (533)
Q Consensus 255 ~~l~~~i~~~~~~g~~~~~iil~~p~-NPtG---~~~s~~~l~~i~~l 298 (533)
+.+++.++.......+...+| +|.. .+.+ ...+.++|+++.++
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVL-ANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEE-ECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEE-ECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 888777765432222455544 4442 2222 24577777776553
No 279
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=67.05 E-value=24 Score=32.09 Aligned_cols=100 Identities=11% Similarity=0.025 Sum_probs=51.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH---h--C-CeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H--G-GTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~---~--g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-......... . + .++..+..|-. |.+.+++.++..
T Consensus 8 k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 81 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLA-TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT-----DCTKADTEIKDI 81 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT-----CHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC-----CHHHHHHHHHHH
Confidence 345666555444455555665 5687777765433333322222 1 3 45666666532 677777777654
Q ss_pred HhcCCCeeEEEEeCCC--CCCccCCCHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG--NPTGQVLAEENQRAIVD 297 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~--NPtG~~~s~~~l~~i~~ 297 (533)
.....+...++ ++.. .+.....+.++|++..+
T Consensus 82 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 82 HQKYGAVDILV-NAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHHCCEEEEE-ECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HHhcCCCCEEE-ECCCcCCCCCCCCCHHHHHHHHH
Confidence 33222555554 4442 22223455566666544
No 280
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=66.95 E-value=26 Score=32.32 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=53.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc-------Cc-----c---hHHHHHHhCCeEEEEecCCCCCCCCCH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-------YP-----L---YSASIALHGGTLVPYYLDEATGWGLET 254 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~-------~~-----~---~~~~~~~~g~~~~~v~~~~~~~~~ld~ 254 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-. |. . ....+...|.++..+..|-. |.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~ 86 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLA-ADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR-----DR 86 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT-----CH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC-----CH
Confidence 3456666655555555566666 578777765422 10 1 11223445778888877643 77
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEeCCC-CCCccCCCHHHHHHHHH
Q 009517 255 SEVKKQLEAAKAKGITVRALVVINPG-NPTGQVLAEENQRAIVD 297 (533)
Q Consensus 255 ~~l~~~i~~~~~~g~~~~~iil~~p~-NPtG~~~s~~~l~~i~~ 297 (533)
+.+++.++...+...+...+| ++.. .+.+. +.++|+++.+
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVV-ANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEE-ECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCC--CHHHHHHHHH
Confidence 888877765432222455554 4442 22222 4666666544
No 281
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=66.93 E-value=61 Score=29.78 Aligned_cols=103 Identities=12% Similarity=0.027 Sum_probs=57.1
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc----------chHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----------LYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~----------~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
.....+++|.|+...-..+.+.|. ..|.+|++..-.-. .....+...|.++..+..|-. |.+.+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v 77 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAA-RDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR-----EEDQV 77 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT-----CHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHH
Confidence 334456666665555555566666 57877776543322 122333455888888887743 67888
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 258 KKQLEAAKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
++.++...+...+...+| ++.. ...+ ...+.++|+++.+
T Consensus 78 ~~~~~~~~~~~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 78 RAAVAATVDTFGGIDILV-NNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHHHSCCCEEE-ECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEE-ECCCcccCCCcccCCHHHHHHHHh
Confidence 777765433222455544 4442 2112 2456677776554
No 282
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=66.50 E-value=68 Score=29.59 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=53.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..|++|.|+...-..+.+.|. +.|.+|++..-.-...... +...+.++..+..|-. |.+.+++.++.....
T Consensus 45 k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLA-KSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS-----KKEEISEVINKILTE 118 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHT-TTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCC-----CHHHHHHHHHHHHHh
Confidence 346666555554555566666 6787777743221112222 2223667777776533 678888887664333
Q ss_pred CCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
..+..+||-+--..+.+ ...+.++++++.+
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 33455555432222222 2356666666544
No 283
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=66.23 E-value=31 Score=31.88 Aligned_cols=104 Identities=13% Similarity=0.126 Sum_probs=57.1
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~ 263 (533)
+....+++|.|+...-..+.+.|. ..|..|++.. ..-.. ....+...|.++..+..|-. |.+.+++.++.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 102 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNR-----DAEAIEQAIRE 102 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 444456666665555555666666 5787777652 21111 22233445778888877643 77888877765
Q ss_pred HHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 264 AKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 264 ~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
..+...+...+| ++.. ...+ ...+.++|+++.+.
T Consensus 103 ~~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 103 TVEALGGLDILV-NSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 432222455544 4442 2112 24577777776553
No 284
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=66.18 E-value=29 Score=32.11 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=54.8
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc------------C-cch---HHHHHHhCCeEEEEecCCCCCCCCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ------------Y-PLY---SASIALHGGTLVPYYLDEATGWGLE 253 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~------------~-~~~---~~~~~~~g~~~~~v~~~~~~~~~ld 253 (533)
...+++|.|+...-..+.+.|. ..|.+|++.+-. - ... ...+...+.++..+..|-. |
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~ 84 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMA-AEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR-----D 84 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----C
T ss_pred CCEEEEECCccHHHHHHHHHHH-HcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----C
Confidence 3446666655554555556666 578777775321 0 111 1223345777877777643 7
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEeCCC-CCCcc--CCCHHHHHHHHHH
Q 009517 254 TSEVKKQLEAAKAKGITVRALVVINPG-NPTGQ--VLAEENQRAIVDF 298 (533)
Q Consensus 254 ~~~l~~~i~~~~~~g~~~~~iil~~p~-NPtG~--~~s~~~l~~i~~l 298 (533)
.+.+++.++...+.-.+...+| ++.. .+.+. ..+.++|+++.+.
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDIIV-ANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 7888877766432222455554 4442 22222 4577777776553
No 285
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=66.09 E-value=41 Score=31.12 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=56.9
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
+....+++|.|+...-..+.+.|. +.|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++..
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~ 103 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYA-EAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT-----QPDQVRGMLDQM 103 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHH
Confidence 334456666665555555566666 578777776543333332 33445667777776633 678887777654
Q ss_pred HhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.+.-.+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 104 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 104 TGELGGIDIAV-CNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHHSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 32222455554 4432 2222 2457777777655
No 286
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=65.78 E-value=44 Score=30.51 Aligned_cols=101 Identities=13% Similarity=0.020 Sum_probs=54.9
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. +.|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++.....
T Consensus 30 k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLG-SLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLAA 103 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHh
Confidence 345665555444445555665 578777776543333222 23345777777777643 678877777654322
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
..+...+|.+... .+.+ ...+.++++++.+
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 2245555544222 2322 2356677766554
No 287
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=65.21 E-value=40 Score=30.82 Aligned_cols=102 Identities=7% Similarity=0.050 Sum_probs=57.6
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. ..|-+|++..-.-..... .+...|.++..+..|-. |.+.+++.++...+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCA-EQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVDETMK 84 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3456666665555555566666 578777776543332222 23345777888877643 67888887776533
Q ss_pred cCCCeeEEEEeCC-C-CCCc--cCCCHHHHHHHHHH
Q 009517 267 KGITVRALVVINP-G-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 267 ~g~~~~~iil~~p-~-NPtG--~~~s~~~l~~i~~l 298 (533)
...+...+| ++. . .+.+ ...+.++|++..++
T Consensus 85 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 85 AYGRVDVVI-NNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp HTSCCSEEE-ECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCcEEE-ECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 333455554 443 2 1222 24566777776553
No 288
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=65.04 E-value=43 Score=30.45 Aligned_cols=101 Identities=15% Similarity=0.158 Sum_probs=54.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH---hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-......... .+.++..+..|-. |.+.+++.++...+.
T Consensus 7 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFA-KEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVR-----NTDDIQKMIEQIDEK 80 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 345555555444445555665 5787887755433333333222 3567777776633 677777777654322
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
..+...++ ++.. .+.+ ...+.++|++..++
T Consensus 81 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 81 FGRIDILI-NNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp HSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 22455554 4442 2212 34677777776654
No 289
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=64.99 E-value=32 Score=32.70 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=54.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc----------Cc---chHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ----------YP---LYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~----------~~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-. -. .....+...|.++..+..|-. |.+.+
T Consensus 28 k~vlVTGas~GIG~aia~~la-~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v 101 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFA-AEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA-----DWDQA 101 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT-----SHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHH
Confidence 345555555444445555565 578788775422 11 122334455778877776643 67887
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 258 KKQLEAAKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
++.++.......+...+ +++.. ...+ ...+.++|+++.++
T Consensus 102 ~~~~~~~~~~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVL-VNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHSCCCEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77776543222244444 44442 2222 24577777776654
No 290
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=64.80 E-value=45 Score=30.75 Aligned_cols=101 Identities=11% Similarity=0.055 Sum_probs=55.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC------------c---chHHHHHHhCCeEEEEecCCCCCCCCCH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY------------P---LYSASIALHGGTLVPYYLDEATGWGLET 254 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~------------~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~ 254 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.- . .....+...|.++..+..|-. |.
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~ 83 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALA-EAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK-----DR 83 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CH
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC-----CH
Confidence 3456666655555555666666 5787777654321 0 111223445778888877643 67
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 255 SEVKKQLEAAKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 255 ~~l~~~i~~~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+.+++.++...+...+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIAI-TNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEEE-ECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 888777765433222455554 4442 2222 3457777776554
No 291
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=64.38 E-value=38 Score=31.33 Aligned_cols=100 Identities=20% Similarity=0.131 Sum_probs=54.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-...... +...|.++..+..|-. |.+.+++.++.....
T Consensus 25 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLA-ARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVT-----STDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 345666555554455556666 5787777765432222222 2334677777777633 678887777654322
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
..+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 99 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 99 FGPIGILV-NSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp HCSCCEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 22455544 4442 2222 2457777776554
No 292
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=64.37 E-value=35 Score=30.87 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=54.2
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC-cc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~-~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.- .. ....+...|.++..+..|-. |.+.+++.++...+.
T Consensus 6 ~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLA-EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA-----DADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 45666555555555556666 6787776643221 11 22234445777777777633 678887777654322
Q ss_pred CCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
..+...++ ++. ..+.+ ...+.++|+++.+
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 80 FGSLDVLV-NNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp HSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 22455554 443 22222 3457777777654
No 293
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=64.32 E-value=41 Score=31.55 Aligned_cols=100 Identities=15% Similarity=0.090 Sum_probs=55.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-...... +...|.++..+..|-. |.+.+++.++...+.
T Consensus 32 k~vlVTGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFA-RRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR-----HLDEMVRLADEAFRL 105 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHh
Confidence 456666655554555556665 5787777765433333222 3334677777777643 678887777654322
Q ss_pred CCCeeEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG~--~~s~~~l~~i~~ 297 (533)
..+...+| ++.. .+.+. ..+.++++++.+
T Consensus 106 ~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 106 LGGVDVVF-SNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HSSCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 22455554 4442 22222 456677766554
No 294
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=63.96 E-value=27 Score=32.41 Aligned_cols=83 Identities=18% Similarity=0.126 Sum_probs=49.4
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.++.......
T Consensus 5 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 78 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFV-AEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR-----SLQDQKRAAERCLAAFG 78 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCC-----CHHHHHHHHHHHHHhcC
Confidence 3456666666555555666666 67888887765444445555556777777777633 67777777765432222
Q ss_pred CeeEEEEeCC
Q 009517 270 TVRALVVINP 279 (533)
Q Consensus 270 ~~~~iil~~p 279 (533)
+...+ +++.
T Consensus 79 ~iD~l-vnnA 87 (281)
T 3zv4_A 79 KIDTL-IPNA 87 (281)
T ss_dssp CCCEE-ECCC
T ss_pred CCCEE-EECC
Confidence 44444 4444
No 295
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=63.83 E-value=34 Score=31.16 Aligned_cols=100 Identities=16% Similarity=0.091 Sum_probs=51.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. +.|.+|++..-.-..........|.++..+..|-. |.+.+++.++...+.-.+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAV-AAGARVVLADVLDEEGAATARELGDAARYQHLDVT-----IEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 346666555555555566666 57877776543322223333333556666666532 677777777653222124
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+| ++.. .+.+ ...+.++|+++.+
T Consensus 80 iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 80 VDGLV-NNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CCEEE-ECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55554 4432 2222 2356666666544
No 296
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=63.79 E-value=40 Score=30.52 Aligned_cols=100 Identities=17% Similarity=0.151 Sum_probs=53.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..|++|.|+...-..+.+.|. +.|..|++.. ..-... ...+...+.++..+..|- -|.+.+++.++....
T Consensus 14 k~vlITGas~giG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLH-KDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAFDKVKA 87 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHH-HTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHHHHHHH
Confidence 345555555444445555665 5787776633 222222 233344566777776653 367888877776543
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+| ++.. .+.+ ...+.+++++..+
T Consensus 88 ~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 88 EVGEIDVLV-NNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp HTCCEEEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 333565554 4432 2222 2456666666554
No 297
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=63.71 E-value=1.2e+02 Score=29.97 Aligned_cols=82 Identities=15% Similarity=-0.013 Sum_probs=43.9
Q ss_pred CCEEEcCChHHHHHH-HHHHhccC-CCCeEEEcCCc------------Ccc---hHHHHHHhCCeEEEEecCCCCCCCCC
Q 009517 191 NDIFLTDGASPAVHM-MMQLLIRS-ENDGILCPIPQ------------YPL---YSASIALHGGTLVPYYLDEATGWGLE 253 (533)
Q Consensus 191 ~~i~~t~G~~~al~~-~~~~l~~~-~gd~Vlv~~p~------------~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld 253 (533)
..+++.+|++.++-. +.+.|. . .|-.|++..-. |.+ ....+...|.++..+..|- -|
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA-~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dv-----td 120 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAA-FGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDA-----FS 120 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHH-HHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCT-----TS
T ss_pred CCEEEEeCcchHHHHHHHHHHH-HhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCC-----CC
Confidence 344444444445544 444454 5 67676653211 111 1224456688888887763 37
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEeCC
Q 009517 254 TSEVKKQLEAAKAKGITVRALVVINP 279 (533)
Q Consensus 254 ~~~l~~~i~~~~~~g~~~~~iil~~p 279 (533)
.+.+++.++.....-.+.. ++++|.
T Consensus 121 ~~~v~~~v~~i~~~~G~ID-iLVNNA 145 (405)
T 3zu3_A 121 DEIKQLTIDAIKQDLGQVD-QVIYSL 145 (405)
T ss_dssp HHHHHHHHHHHHHHTSCEE-EEEECC
T ss_pred HHHHHHHHHHHHHHcCCCC-EEEEcC
Confidence 7888877776543333454 445654
No 298
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=63.53 E-value=49 Score=29.88 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=53.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... +...|.++..+..|-. |.+.+++.++...+.
T Consensus 8 k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 8 KVALITGASSGIGEATARALA-AEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA-----DRQGVDAAVASTVEA 81 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 456666665555555566666 5787777654322222222 2233667777776633 677887777654222
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
..+...++ ++.. .+.+ ...+.++|+++.+
T Consensus 82 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 82 LGGLDILV-NNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp HSCCSEEE-ECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 12455554 4432 2222 2356677766554
No 299
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=63.51 E-value=54 Score=30.35 Aligned_cols=102 Identities=15% Similarity=0.051 Sum_probs=55.5
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-chHHHHH---H-hCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIA---L-HGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~~~~~~~---~-~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-. ....... . .+.++..+..|-. |.+.+++.++..
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 98 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLA-KAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT-----KPSEIADMMAMV 98 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTT-----CHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCC-----CHHHHHHHHHHH
Confidence 3456776666555555666666 57878777653221 1122221 1 2567777776533 678888877765
Q ss_pred HhcCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 265 KAKGITVRALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 265 ~~~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
.....+...+| ++. ..+.+ ...+.++|+++.+.
T Consensus 99 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 99 ADRFGGADILV-NNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHHTSSCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 33333455554 444 22222 24577777776553
No 300
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=63.08 E-value=41 Score=30.40 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=56.0
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
....+++|.|+...-..+.+.|. ..|-+|++..-.-..... .+...+.++..+..|-. |.+.+++.++...
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALA-REGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVS-----DPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHH
Confidence 33456666665555555666666 578777776543332222 23334778888877643 6777777776543
Q ss_pred hcCCCeeEEEEeCCCC----CCc--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPGN----PTG--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~N----PtG--~~~s~~~l~~i~~ 297 (533)
....+...+| ++..- +.+ ...+.+++++..+
T Consensus 82 ~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 82 AEFGGIDYLV-NNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HHHSCCCEEE-ECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 2222455554 44321 111 2456677766554
No 301
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=63.04 E-value=35 Score=32.37 Aligned_cols=100 Identities=17% Similarity=0.166 Sum_probs=54.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc-------Cc-----c---hHHHHHHhCCeEEEEecCCCCCCCCCHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-------YP-----L---YSASIALHGGTLVPYYLDEATGWGLETS 255 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~-------~~-----~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~ 255 (533)
..+++|.|+...-..+.+.|. ..|.+|++.+-. +. . ....+...|.++..+..|-. |.+
T Consensus 47 k~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~ 120 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLA-QDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVR-----DLA 120 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHH
Confidence 345665555444455555665 578777765322 11 1 11223445778888877643 678
Q ss_pred HHHHHHHHHHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 256 EVKKQLEAAKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 256 ~l~~~i~~~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.+++.++.......+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 121 ~v~~~~~~~~~~~g~iD~lV-nnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILV-SNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 88777765432222455554 4442 2222 2457777777654
No 302
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=62.91 E-value=33 Score=31.74 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=54.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc--------Cc-----c---hHHHHHHhCCeEEEEecCCCCCCCCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ--------YP-----L---YSASIALHGGTLVPYYLDEATGWGLE 253 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~--------~~-----~---~~~~~~~~g~~~~~v~~~~~~~~~ld 253 (533)
...+++|.|+...-..+.+.|. ..|-+|++..-. |. . ....+...|.++..+..|-. |
T Consensus 15 gk~~lVTGas~gIG~a~a~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~ 88 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLA-AEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR-----D 88 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT-----C
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC-----C
Confidence 3456666655555555566666 578777775321 11 1 12223345777777777633 6
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 254 TSEVKKQLEAAKAKGITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 254 ~~~l~~~i~~~~~~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
.+.+++.++...+...+...+| ++. ....+ ...+.++|+++.+
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVV-ANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHh
Confidence 7888777765432222455554 443 22222 2357777776654
No 303
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=62.79 E-value=54 Score=29.94 Aligned_cols=104 Identities=14% Similarity=0.059 Sum_probs=55.8
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---H-hC-CeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-HG-GTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~-~g-~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
+....+++|.|+...-..+.+.|. ..|.+|++..-.-........ . .+ .++..+..|-. |.+.+++.++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 79 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLL-EAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL-----DALQVRAFAE 79 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT-----CHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-----CHHHHHHHHH
Confidence 334456666666555555666666 578778776543322222222 1 33 34777776633 6777777776
Q ss_pred HHHhcCCCeeEEEEeCC-CCCCcc--CCCHHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINP-GNPTGQ--VLAEENQRAIVDF 298 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p-~NPtG~--~~s~~~l~~i~~l 298 (533)
...+...+...++ ++. ..+.+. ..+.++|++..+.
T Consensus 80 ~~~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 80 ACERTLGCASILV-NNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHHHCSCSEEE-ECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5432222455444 444 222222 4677777776654
No 304
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=62.28 E-value=13 Score=38.34 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=67.9
Q ss_pred cCCCCCCCCEEEcCChHHHHHHHHHHhcc--CC---------C-C-----eEEEcCCcCcc-------------------
Q 009517 184 DGFPADPNDIFLTDGASPAVHMMMQLLIR--SE---------N-D-----GILCPIPQYPL------------------- 227 (533)
Q Consensus 184 ~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~---------g-d-----~Vlv~~p~~~~------------------- 227 (533)
|...++.+.|.++.++..++...++.|.+ .. | . ..+...|.|.-
T Consensus 124 Y~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~ 203 (525)
T 3gh5_A 124 YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR 203 (525)
T ss_dssp EEEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHH
T ss_pred eEEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHH
Confidence 34446677888887776666666655531 11 1 0 12334455541
Q ss_pred hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
+.+.+..++.+...+.+.++.+|.+..+..-+.-.. |..+ ....+.|-.||++++++|++.|+++++-||
T Consensus 204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~----Ga~~------~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEI----GSKG------QVGGGPGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT----TTSC------CTTSSCCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHcCCcEEEEEeccCCccccccccchhhhhc----cCcc------ccCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 234455567777777777666776655443332211 1110 011223567999999999999999999888
Q ss_pred E
Q 009517 308 A 308 (533)
Q Consensus 308 ~ 308 (533)
-
T Consensus 274 P 274 (525)
T 3gh5_A 274 P 274 (525)
T ss_dssp E
T ss_pred E
Confidence 6
No 305
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=62.22 E-value=61 Score=29.86 Aligned_cols=100 Identities=18% Similarity=0.065 Sum_probs=52.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++.....
T Consensus 23 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLG-KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR-----SVPEIEALVAAVVER 96 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 456666655554555556665 568777765432222222 22233667777776533 678888777654332
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
-.+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 97 ~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 97 YGPVDVLV-NNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp TCSCSEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 22455554 4442 2222 2356666766554
No 306
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=62.05 E-value=52 Score=30.64 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=56.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-.. ........|.++..+..|-. |.+.+++.++...
T Consensus 47 gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS-----DEQHCKDIVQETV 120 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT-----SHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHH
Confidence 3456666665555555666666 578777765433221 22233445778888877643 6778777776543
Q ss_pred hcCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 266 ~~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
+...+...+| ++.. .+.+ ...+.++|+++.++
T Consensus 121 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 121 RQLGSLNILV-NNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHSSCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 2222455544 4432 2222 23467777776553
No 307
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=61.75 E-value=40 Score=30.88 Aligned_cols=102 Identities=11% Similarity=0.006 Sum_probs=52.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH----HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~----~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-........ ..|.++..+..|-. |.+.+++.++...+
T Consensus 21 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFA-AAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAAE 94 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 445665555444455555665 578777776543322222221 25777777777643 45555555544322
Q ss_pred cCCCeeEEEEeCC-CCCCc-cCCCHHHHHHHHHH
Q 009517 267 KGITVRALVVINP-GNPTG-QVLAEENQRAIVDF 298 (533)
Q Consensus 267 ~g~~~~~iil~~p-~NPtG-~~~s~~~l~~i~~l 298 (533)
...+...+|-+-- ..+.. ...+.++|++..+.
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 1224555554422 22221 24567777766543
No 308
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=61.66 E-value=62 Score=29.85 Aligned_cols=102 Identities=18% Similarity=0.109 Sum_probs=54.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
+....+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~ 104 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLA-GAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLS-----EAGAGTDLIERA 104 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTT-----STTHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHHHH
Confidence 334456666665555555566666 578777776543333222 33345777777776643 445555555543
Q ss_pred HhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.+.| +...++ ++.. .+.+ ...+.++|+++.+
T Consensus 105 ~~~g-~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 105 EAIA-PVDILV-INASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp HHHS-CCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHhC-CCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 3222 455554 4442 2222 2457777776654
No 309
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=61.50 E-value=41 Score=30.73 Aligned_cols=103 Identities=11% Similarity=0.020 Sum_probs=54.1
Q ss_pred CCCEEEcCCh-HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH---h-CCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 190 PNDIFLTDGA-SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H-GGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 190 ~~~i~~t~G~-~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~---~-g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
...+++|.|+ ...-..+.+.|. ..|..|++..-.-......... . +.++..+..|-. |.+.+++.++..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~ 95 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRAL-LEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALITQT 95 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHHHHH
Confidence 3456666653 334445555555 5687777765433333332222 2 356777776643 678887777664
Q ss_pred HhcCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPGNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~l 298 (533)
.+...+...+|.+--..+.+ ...+.+++++..+.
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 33222455555432222222 24577777766553
No 310
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=61.45 E-value=90 Score=28.64 Aligned_cols=102 Identities=17% Similarity=0.082 Sum_probs=53.8
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
+....+++|.|+...-..+.+.|. ..|.+|++..-. ..... .+...|.++..+..|-. |.+.+++..+..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 101 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYA-RAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLA-----DLEGAANVAEEL 101 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHH
Confidence 334456666665555555666666 578777776522 22222 22334677777777643 666666654332
Q ss_pred HhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
...| +...+| ++.. .+.+ ...+.++|+++.+.
T Consensus 102 ~~~g-~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 102 AATR-RVDVLV-NNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HHHS-CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhcC-CCcEEE-ECCCCCCCCCchhCCHHHHHHHHHH
Confidence 2222 455544 4442 1111 24577777776553
No 311
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=61.34 E-value=57 Score=29.65 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=52.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---Hh-CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LH-GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~~-g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-........ .. |.++..+..|-. |.+.+++.++...
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFA-KEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA-----TPEGVDAVVESVR 80 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHH
Confidence 3456676665555555666666 578777765432222222221 12 667777776533 6777777776542
Q ss_pred hcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+.-.+...+| ++.. .+.+ ...+.++|++..+
T Consensus 81 ~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 81 SSFGGADILV-NNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHHSSCSEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 2212455554 4432 1112 2346666665544
No 312
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=61.33 E-value=57 Score=29.63 Aligned_cols=99 Identities=17% Similarity=0.054 Sum_probs=51.3
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc-hHHHHHH---h-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YSASIAL---H-GGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~-~~~~~~~---~-g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
.+++|.|+...-..+.+.|. +.|.+|++..-.-.. ....... . |.++..+..|-. |.+.+++.++...+
T Consensus 6 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALA-AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS-----KGEAVRGLVDNAVR 79 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTT-----SHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 45666555444455555665 578777776533222 2222222 1 667777766532 67777777765322
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+| ++.. .+.+ ...+.++|++..+
T Consensus 80 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILV-NNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 212455554 4442 2222 2356677766554
No 313
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=61.10 E-value=63 Score=30.01 Aligned_cols=101 Identities=16% Similarity=0.139 Sum_probs=53.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. +.|.+|++..-.-......... .+.++..+..|-. |.+.+++.++...+
T Consensus 27 k~vlITGasggiG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLS-SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR-----DPDMVQNTVSELIK 100 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CHHHHHHHHHHHHH
Confidence 356666655555555666666 5687777755332222222222 1667777776632 67888888776533
Q ss_pred cCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
...+..+||-+-.....+ ...+.+++++..+
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 333455555332222111 1356666665544
No 314
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=60.96 E-value=41 Score=30.57 Aligned_cols=101 Identities=16% Similarity=0.211 Sum_probs=63.3
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEE-Ec--CC------cC-----cchHHHHHHhCCeEEEEecCCCCCCCCCHHHH
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGIL-CP--IP------QY-----PLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vl-v~--~p------~~-----~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l 257 (533)
-+++.+||.....++..+.. .|-+|. +. -| .| ......++..|++...+++.... .--.++|
T Consensus 7 vvvl~SGGkDSs~al~~l~~--~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l 82 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAIK--NRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDL 82 (237)
T ss_dssp EEEECCSSHHHHHHHHHHHH--TTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHH
T ss_pred EEEEecCcHHHHHHHHHHHH--cCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHH
Confidence 36777999988887776653 565443 21 11 11 12345677789998888876431 2236777
Q ss_pred HHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 258 ~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
.++++.. ...+++ +|.+.+..+...+-++|.+.|+.+++
T Consensus 83 ~~~l~~~-----~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 83 KRVLSGL-----KIQGIV-------AGALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHHHTTS-----CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHhc-----CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEEc
Confidence 7777653 455666 79999988999999999999988775
No 315
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=60.58 E-value=63 Score=29.22 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=51.9
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++......
T Consensus 4 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLV-KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS-----DRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHHh
Confidence 35666555444455555665 568777765432221222 22234666777776532 6788887776543322
Q ss_pred CCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 78 g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 78 GGFDVIV-NNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp TCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 2455554 4432 2222 2356677766554
No 316
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=59.80 E-value=34 Score=30.55 Aligned_cols=101 Identities=11% Similarity=0.018 Sum_probs=54.5
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH----HHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.+. ..|..|++..-.-....... ...|.++..+..|-. |.+.+++.++...+.
T Consensus 4 ~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALA-RDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS-----KAESVEEFSKKVLER 77 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHCC-HHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccC-----CHHHHHHHHHHHHHh
Confidence 46666665555555666666 57877777654433222222 245778888877643 678877776543222
Q ss_pred CCCeeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 009517 268 GITVRALVVINPGNPTGQ--VLAEENQRAIVDF 298 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~--~~s~~~l~~i~~l 298 (533)
..+...++-+--..+.+. ..+.+++++..+.
T Consensus 78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 78 FGDVDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp HSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred cCCCCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 224555543322222222 3477777766553
No 317
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=59.79 E-value=48 Score=29.86 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=49.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..........|.. .+..|- -|.+.+++.++.......+
T Consensus 6 k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~D~-----~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFA-KEGARLVACDIEEGPLREAAEAVGAH--PVVMDV-----ADPASVERGFAEALAHLGR 77 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTTTCE--EEECCT-----TCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCE--EEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666555554555556665 57877776543322222333333533 344432 2677777776653222224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
...+| ++.. .+.+ ...+.++|+++.+.
T Consensus 78 id~lv-n~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 78 LDGVV-HYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp CCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 55554 4432 2222 23566777766553
No 318
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=59.37 E-value=87 Score=28.32 Aligned_cols=101 Identities=14% Similarity=0.030 Sum_probs=54.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++...+
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELA-SLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS-----SRSERQELMNTVAN 82 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3456776665555555666666 578777765432222222 22234667777776633 67888877765433
Q ss_pred cC-CCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KG-ITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g-~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.- .+...++ ++.. .+.+ ...+.++++++.+
T Consensus 83 ~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 83 HFHGKLNILV-NNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp HTTTCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 21 2455554 4432 2222 2456677766554
No 319
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=59.32 E-value=53 Score=30.19 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=53.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|-+|++..-.-.... ..+...|.++..+..|- -|.+.+++.++.....
T Consensus 29 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELA-RRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLKE 102 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHHH
Confidence 345665555444445555665 57877777654332222 23334566666666653 2677777777654322
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
-.+...+ +++.. .+.+ ...+.++|+++.++
T Consensus 103 ~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 103 FGALNVL-VNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp HSCCCEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 2245544 44442 2222 24577777776553
No 320
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=59.04 E-value=60 Score=29.74 Aligned_cols=83 Identities=10% Similarity=-0.014 Sum_probs=45.5
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
....|++|.|+...-..+.+.|. +.|..|++..-.-...... +...|.++..+..|- -|.+.+++.++...
T Consensus 30 ~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFA-KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-----SNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 33456666655555555666666 5687777655332222222 233466777777653 26788887776543
Q ss_pred hcCCCeeEEEEe
Q 009517 266 AKGITVRALVVI 277 (533)
Q Consensus 266 ~~g~~~~~iil~ 277 (533)
....+...||-+
T Consensus 104 ~~~g~iD~li~~ 115 (272)
T 1yb1_A 104 AEIGDVSILVNN 115 (272)
T ss_dssp HHTCCCSEEEEC
T ss_pred HHCCCCcEEEEC
Confidence 322245555433
No 321
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=58.99 E-value=64 Score=28.96 Aligned_cols=100 Identities=14% Similarity=0.128 Sum_probs=51.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC-cCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..- .-..... .+...|.++..+..|-. |.+.+++.++...+
T Consensus 5 k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLA-KQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVA-----NAEDVTNMVKQTVD 78 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345666555444455555665 57877776432 2111221 22334667777776533 67788777765422
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 79 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 79 VFGQVDILV-NNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HHSCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 222455554 4432 2222 2356667766554
No 322
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=58.99 E-value=65 Score=29.31 Aligned_cols=100 Identities=10% Similarity=0.016 Sum_probs=53.8
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.|. ..|-+|++. .-.-..... .+...|.++..+..|-. |.+.+++.++...+.
T Consensus 6 ~vlVTGas~gIG~aia~~l~-~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLA-ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVG-----QPAKIKEMFQQIDET 79 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 35555555444455555665 578777764 333222222 23334677877777643 678888777664322
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
..+...+| ++.. .+.+ ...+.++|+++.++
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 80 FGRLDVFV-NNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp HSCCCEEE-ECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 22455554 4442 2222 24677777766543
No 323
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=58.92 E-value=54 Score=29.89 Aligned_cols=100 Identities=17% Similarity=0.072 Sum_probs=50.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..........+..+..+..|- -|.+.+++.++...+.-.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMV-AEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 446666555554555556666 5787777654322222223333333455555543 2677777777653222124
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+| ++.. ...+ ...+.++++++.+
T Consensus 82 iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (260)
T 1nff_A 82 LHVLV-NNAGILNIGTIEDYALTEWQRILD 110 (260)
T ss_dssp CCEEE-ECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55554 4432 2222 2356666766554
No 324
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=58.63 E-value=49 Score=30.14 Aligned_cols=103 Identities=8% Similarity=-0.072 Sum_probs=55.1
Q ss_pred CCCCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCcch-----HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHH
Q 009517 189 DPNDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPLY-----SASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (533)
Q Consensus 189 ~~~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i 261 (533)
....+++|.|+ ...-..+.+.|. ..|..|++..-.-... .......+.++..+..|-. |.+.+++.+
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 92 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCA-EMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD-----SYESCEKLV 92 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHH-HTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTT-----CHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHH-HCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCC-----CHHHHHHHH
Confidence 33456666544 344444555555 5687777754333222 2222345778877777643 788888877
Q ss_pred HHHHhcCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 262 EAAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
+...+...+...+|-+--..+.+ ...+.++++++.+
T Consensus 93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 76543333556555432222222 2346666766654
No 325
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=58.61 E-value=50 Score=30.07 Aligned_cols=100 Identities=13% Similarity=0.020 Sum_probs=50.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-............++..+..|- -|.+.+++.++.......+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALD-KAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV-----TKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCT-----TCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeC-----CCHHHHHHHHHHHHHHcCC
Confidence 456666555554555566666 5787777654322222222232322344455442 2677777777654222224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+| ++.. .+.+ ...+.++|++..+
T Consensus 87 iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 87 FDLLC-ANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 55554 4432 2222 2356677776554
No 326
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=58.53 E-value=89 Score=27.77 Aligned_cols=102 Identities=10% Similarity=-0.040 Sum_probs=52.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---H-hCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-HGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~-~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
...+++|.++...-..+.+.|. ..|.+|++..-.-........ . .+.++..+..|- -|.+.++++++...
T Consensus 7 ~~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLA-SAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIY 80 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHH
Confidence 3456666555555555566666 568777765432222222111 1 466677776653 26788888777543
Q ss_pred hcCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
+.-.+...||-+-...+.+ ...+.+++++..+
T Consensus 81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 3222455555432222222 2345566655443
No 327
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=58.24 E-value=37 Score=31.12 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=50.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-.......+..+.++..+..|-. |.+.+++.++...+...+
T Consensus 7 k~vlITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFA-REGASLVAVDREERLLAEAVAALEAEAIAVVADVS-----DPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTT-----SHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCC-----CHHHHHHHHHHHHHHcCC
Confidence 346666555555555556665 57877777543322233333434445666666532 677777777654222224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+| ++.. .+.+ ...+.++|+++.+
T Consensus 81 iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 81 LHGVA-HFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CCEEE-EGGGGTTTTC----CHHHHHHHHH
T ss_pred CcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55554 4331 2222 2345566665544
No 328
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=57.99 E-value=63 Score=29.94 Aligned_cols=100 Identities=11% Similarity=0.004 Sum_probs=55.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---HhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|-.|++..-.-........ ..|.++..+..|-. |.+.+++.++...+.
T Consensus 29 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALA-ADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVS-----DELQMRNAVRDLVLK 102 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 446666655555555556666 578777776543333333322 24667777777643 678887777664332
Q ss_pred CCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG--NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~ 297 (533)
..+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 103 ~g~iD~lV-nnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 103 FGHLDIVV-ANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp HSCCCEEE-ECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCCchhhCCHHHHHHHHH
Confidence 22455544 4442 1212 2567777777654
No 329
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=57.96 E-value=57 Score=30.42 Aligned_cols=102 Identities=15% Similarity=0.050 Sum_probs=56.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-----chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-----LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-. .....+...|.++..+..|-. |.+.+++.++..
T Consensus 49 ~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 122 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYA-REGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS-----DESFARSLVHKA 122 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTT-----SHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHHHHH
Confidence 3456666665555555666666 67877777543211 122234446777877776633 677777777654
Q ss_pred HhcCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
.+...+...++ ++.. .+.+ ...+.++|+++.++
T Consensus 123 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 123 REALGGLDILA-LVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHTCCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 32222455554 4442 2222 24577777776654
No 330
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=57.67 E-value=67 Score=29.27 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=51.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---Hh--CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LH--GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~~--g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-........ .. +.++..+..|-. |.+.+++.++...
T Consensus 14 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLA-AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS-----DEAQVEAYVTATT 87 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCC-----CHHHHHHHHHHHH
Confidence 446666555554555566666 578777765432222222222 22 667777776633 6778877776542
Q ss_pred hcCCCeeEEEEeCCC-CCC-c--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG-NPT-G--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~-NPt-G--~~~s~~~l~~i~~ 297 (533)
....+...+| ++.. .+. + ...+.++|+++.+
T Consensus 88 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 88 ERFGRIDGFF-NNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp HHHSCCSEEE-ECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHHH
Confidence 2212445444 4442 111 2 2346677766544
No 331
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=57.59 E-value=88 Score=28.21 Aligned_cols=100 Identities=21% Similarity=0.130 Sum_probs=51.3
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCc-chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~-~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-. .....+...|.++..+..|- -|.+.+++.++...+...
T Consensus 5 k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLA-RAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFALAEREFG 78 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcC
Confidence 346666555554555556666 57877776543221 11122233366676666653 267788777765422212
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 79 ~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 79 GVDILV-NNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp SCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 455554 4432 2222 2346666766544
No 332
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=57.56 E-value=1.1e+02 Score=27.54 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=52.2
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH----HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..|++|.|+...-..+.+.|. +.|.+|++..-.-..... .....+.++..+..|- -|.+.+++.++....
T Consensus 15 k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVA-AAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQQIDA 88 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHH-HTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 356676655555555666666 567666665432222221 2222366777777653 267888877776433
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+...++ ++.. ...+ ...+.+++++..+
T Consensus 89 ~~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 89 DLGPISGLI-ANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp HSCSEEEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCcCCCCchhhCCHHHHHHHHh
Confidence 233455554 4332 2222 2346666665544
No 333
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=57.32 E-value=78 Score=28.49 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=52.9
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...|++|.|+...-..+.+.|. +.|.+|++..-.-.... ..++..+.++..+..|-. |.+.+++.++....
T Consensus 13 ~k~vlItGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALA-EAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVT-----NTESVQNAVRSVHE 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHH
Confidence 3456776655555555666666 56877776543322222 222334666777776532 67888777765322
Q ss_pred cCCCeeEEEEeCCCCC-Cc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNP-TG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~NP-tG--~~~s~~~l~~i~~ 297 (533)
...+...||.+....+ .+ ...+.+++++..+
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 2224555554422111 22 2346566665443
No 334
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.31 E-value=57 Score=29.73 Aligned_cols=101 Identities=11% Similarity=0.108 Sum_probs=53.8
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH---HHhC-CeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~---~~~g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-....... ...+ .++..+..|-. |.+.+++.++...
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFA-RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS-----DRAQCDALAGRAV 83 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCC-----CHHHHHHHHHHHH
Confidence 3456666655555555556666 57877777654332222222 2233 56777776633 6777777766543
Q ss_pred hcCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
+...+...++ ++. ..+.+ ...+.++|+++.+
T Consensus 84 ~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 84 EEFGGIDVVC-ANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHHSCCSEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 2222455554 443 22222 2457777776654
No 335
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=57.30 E-value=70 Score=29.76 Aligned_cols=101 Identities=12% Similarity=0.073 Sum_probs=52.7
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++....
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 107 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYA-KAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVT-----DEDGIQAMVAQIES 107 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 3456666655555555666666 578777765432221222 22334656666666532 67888877766433
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.-.+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 108 ~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 108 EVGIIDILV-NNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp HTCCCCEEE-ECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HcCCCcEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 222455554 4442 2222 2346676766544
No 336
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=56.52 E-value=66 Score=29.75 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=54.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH---hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~---~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|-+|++..-.-......... .|.++..+..|-. |.+.+++.++.....
T Consensus 9 k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFA-REGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVG-----DEALHEALVELAVRR 82 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 345555555444445555665 5788888765443333333322 3667777766533 677777777654322
Q ss_pred CCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 268 GITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 268 g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
..+...+ +++.. .+.+ ...+.++++++.++
T Consensus 83 ~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 83 FGGLDTA-FNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp HSCCCEE-EECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 2245544 44442 1222 24577777776553
No 337
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=56.37 E-value=1e+02 Score=28.19 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=54.0
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-...... +...|.++..+..|-. |.+.+++.++....
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELA-GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLL-----SRTERDKLMQTVAH 94 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHH
Confidence 3456666665555555666666 5787777654332222222 2234667777776533 67888877765433
Q ss_pred cC-CCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KG-ITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g-~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.- .+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 95 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 95 VFDGKLNILV-NNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp HTTSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 21 2455554 4442 2222 2356677776554
No 338
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=56.05 E-value=78 Score=28.30 Aligned_cols=101 Identities=11% Similarity=0.038 Sum_probs=50.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-........... .++..+..|- -|.+.+++.++......
T Consensus 7 k~vlVtGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFV-EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAF 80 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 346666555444455556666 568777765432222222223222 3455555543 26777777776532222
Q ss_pred CCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
.+...||.+....+.+ ...+.++++++.+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2455555442222222 2356666666554
No 339
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=55.68 E-value=73 Score=28.55 Aligned_cols=101 Identities=10% Similarity=0.000 Sum_probs=52.1
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeE-EEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL-VPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~-~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
...+++|.|+...-..+.+.|. +.|.+|++..-.-..........+.++ ..+..|- -|.+.+++.++.....+
T Consensus 11 ~k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFA-ASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHHHHHHhhC
Confidence 3456776655554555666666 568777765533222233333345555 5555543 26788887776543212
Q ss_pred CCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
+...||-+-...+.+ ...+.+++++..+
T Consensus 85 -~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 85 -PVSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp -CCCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred -CCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 455554332222222 2345666665544
No 340
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=55.47 E-value=55 Score=29.35 Aligned_cols=100 Identities=9% Similarity=0.016 Sum_probs=49.6
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHH----hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-......... .+.++..+..|- -|.+.+++.++...+.
T Consensus 4 ~vlItGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFL-ARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAATMEQ 77 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 35666555444455555665 5677777654332222222222 245566666653 2678887777654222
Q ss_pred CCCeeEEEEeCCCCCCc-----cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPGNPTG-----QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG-----~~~s~~~l~~i~~ 297 (533)
..+...||-+-...+.+ ...+.+++++..+
T Consensus 78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 22455554332221111 1345566665544
No 341
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=55.24 E-value=70 Score=28.95 Aligned_cols=99 Identities=18% Similarity=0.112 Sum_probs=50.3
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc--hHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL--YSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~--~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-.. .... +...|.++..+..|-. |.+.+++.++....
T Consensus 4 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 77 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLA-ADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT-----DKANFDSAIDEAAE 77 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHH
Confidence 35666555444455555565 567777765432222 2222 2223667777776633 67777777665322
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.-.+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 78 ~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 78 KLGGFDVLV-NNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HHTCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 212455444 4442 2222 1356676766544
No 342
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=55.10 E-value=1.1e+02 Score=27.51 Aligned_cols=99 Identities=18% Similarity=0.105 Sum_probs=51.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh-----CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH-----GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~-----g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-.......+.. +.++..+..|-. |.+.+++.++...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELA-RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIR-----EPGDIDRLFEKAR 81 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCC-----CHHHHHHHHHHHH
Confidence 456666555554555556665 56877776543222222222211 336666666532 6788888877654
Q ss_pred hcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+... ...+| ++.. .+.+ ...+.++|++..+
T Consensus 82 ~~~g-id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 82 DLGG-ADILV-YSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp HTTC-CSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhcC-CCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 3322 45554 4432 2222 2356666665543
No 343
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=55.03 E-value=56 Score=29.96 Aligned_cols=101 Identities=15% Similarity=0.137 Sum_probs=54.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|..|++. ...-.. ....+...|.++..+..|-. |.+.+++.++...+
T Consensus 28 k~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLA-SDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS-----DPAAVRRLFATAEE 101 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 346666555554455555665 578777764 222211 22233455777888777643 67888777765433
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
...+...+| ++.. .+.+ ...+.++|+++.+.
T Consensus 102 ~~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 102 AFGGVDVLV-NNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp HHSCEEEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 222455544 4442 2222 24566777765553
No 344
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=54.68 E-value=83 Score=28.56 Aligned_cols=100 Identities=12% Similarity=0.045 Sum_probs=51.9
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... +...|.++..+..|-. |.+.+++.++.....
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLA-EEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT-----SEEAVIGTVDSVVRD 81 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 456666655555555566666 5787777654321222222 2223667777776533 677777776654222
Q ss_pred CCCeeEEEEeCCC-C-CCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-N-PTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-N-PtG--~~~s~~~l~~i~~ 297 (533)
-.+...+| ++.. . +.+ ...+.++|+++.+
T Consensus 82 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 82 FGKIDFLF-NNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp HSCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCCccccCCHHHHHHHHH
Confidence 12455444 4432 1 222 2356677776554
No 345
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=53.74 E-value=1.1e+02 Score=27.39 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=52.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc-CcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-YPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~-~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-. -...... +...+.++..+..|-. |.+.+++.++...+
T Consensus 8 k~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFA-RAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLA-----TSEACQQLVDEFVA 81 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHH
Confidence 356666555555555666666 568777765433 2222222 2334667777776633 67888877765422
Q ss_pred cCCCeeEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG~--~~s~~~l~~i~~ 297 (533)
...+..+||-+-.. .+.+. ..+.++++++.+
T Consensus 82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 22245555533222 22221 345566665544
No 346
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=53.38 E-value=31 Score=32.19 Aligned_cols=68 Identities=13% Similarity=0.116 Sum_probs=43.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~ 263 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.++.
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~ 83 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELA-RRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ-----DLSSVRRFADG 83 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTT-----CHHHHHHHHHT
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCC-----CHHHHHHHHHh
Confidence 3456776666555555666666 57878877654433344444445667777777633 78888888875
No 347
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=53.11 E-value=81 Score=28.98 Aligned_cols=100 Identities=9% Similarity=0.020 Sum_probs=50.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHH---HHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGG---TLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~---~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-....... ...|. ++..+..|-. |.+.+++.++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 80 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFA-QEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT-----TEDGQDQIINST 80 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT-----SHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCC-----CHHHHHHHHHHH
Confidence 346666555554555556666 57877776543222222222 22244 5666666532 677777777654
Q ss_pred HhcCCCeeEEEEeCCC-CCCc------cCCCHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG-NPTG------QVLAEENQRAIVD 297 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~-NPtG------~~~s~~~l~~i~~ 297 (533)
.+...+...+| ++.. ...+ ...+.++|+++.+
T Consensus 81 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 81 LKQFGKIDVLV-NNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred HHhcCCCCEEE-ECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 22212455554 4432 1111 2456666666544
No 348
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=51.42 E-value=1.4e+02 Score=26.89 Aligned_cols=102 Identities=11% Similarity=0.008 Sum_probs=54.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccC---CCCeEEEcCCcCcchHHHHHHh-----CCeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRS---ENDGILCPIPQYPLYSASIALH-----GGTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~---~gd~Vlv~~p~~~~~~~~~~~~-----g~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
..+++|.|+...-..+.+.|. . .|.+|++..-.-.......... |.++..+..|-. |.+.+++.++
T Consensus 7 k~~lVTGas~gIG~~ia~~l~-~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 80 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLA-RLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG-----TEAGVQRLLS 80 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHH-TTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT-----SHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHH-HhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC-----CHHHHHHHHH
Confidence 345666555544455556665 5 6878877643322222222221 667777777643 6888888887
Q ss_pred HHHh--cCCCee-EEEEeCCCC--CC-cc--C-CCHHHHHHHHHH
Q 009517 263 AAKA--KGITVR-ALVVINPGN--PT-GQ--V-LAEENQRAIVDF 298 (533)
Q Consensus 263 ~~~~--~g~~~~-~iil~~p~N--Pt-G~--~-~s~~~l~~i~~l 298 (533)
.... ...+.. .+++++..- +. +. . .+.++|+++.++
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 6533 111222 255565532 21 11 1 566777776543
No 349
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=51.16 E-value=90 Score=29.06 Aligned_cols=100 Identities=15% Similarity=0.077 Sum_probs=51.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG---TLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
..+++|.|+...-..+.+.|. +.|.+|++..-.-...... +...|. ++..+..|-. |.+.+++.++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 100 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFA-KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT-----EASGQDDIINTT 100 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-----SHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCC-----CHHHHHHHHHHH
Confidence 446666555554555566666 5787777754332222222 222344 5666666532 677777777653
Q ss_pred HhcCCCeeEEEEeCCC-CCCc----cCCCHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG-NPTG----QVLAEENQRAIVD 297 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~-NPtG----~~~s~~~l~~i~~ 297 (533)
...-.+...+| ++.. ...+ ...+.++|+++.+
T Consensus 101 ~~~~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~~~ 137 (297)
T 1xhl_A 101 LAKFGKIDILV-NNAGANLADGTANTDQPVELYQKTFK 137 (297)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred HHhcCCCCEEE-ECCCcCcCCCCccccCCHHHHHHHHh
Confidence 22112455554 4432 2222 2356666766544
No 350
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=50.63 E-value=95 Score=29.42 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=52.7
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCc--Ccc------hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ--YPL------YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~--~~~------~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~ 263 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-. -.. ....+...|.++..+.+|-. |.+.++++++.
T Consensus 7 ~vlVTGas~GIG~aia~~L~-~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvt-----d~~~v~~~~~~ 80 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALA-GAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQ-----SQVSVDRAIDQ 80 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHH
Confidence 45666555554555556666 678888763211 111 12223345777777777643 67888877765
Q ss_pred HHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 264 AKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 264 ~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
..+...+...+ +++.. .+.| ...+.++++++.+
T Consensus 81 ~~~~~g~iD~l-VnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 81 IIGEDGRIDVL-IHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHSCCSEE-EECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHcCCCCEE-EECCCcCCCCChhhCCHHHHHHHHH
Confidence 43222245544 45442 2222 2346677765544
No 351
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=50.58 E-value=1.2e+02 Score=27.52 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=40.3
Q ss_pred CeEEEcCCcCc---chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe--CCCCCCccCCCH-
Q 009517 216 DGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI--NPGNPTGQVLAE- 289 (533)
Q Consensus 216 d~Vlv~~p~~~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~--~p~NPtG~~~s~- 289 (533)
|.|.+..-.-. .....++.+|.++. +.+.+.. .++.++..+.. ...|++. +|.. .|..+-+
T Consensus 111 d~itvH~Ea~~~~~~~i~~ir~~G~k~G-valnp~T----p~e~l~~~l~~-------vD~VlvMsV~PGf-gGQ~fi~~ 177 (246)
T 3inp_A 111 TSIVFHPEASEHIDRSLQLIKSFGIQAG-LALNPAT----GIDCLKYVESN-------IDRVLIMSVNPGF-GGQKFIPA 177 (246)
T ss_dssp SEEEECGGGCSCHHHHHHHHHTTTSEEE-EEECTTC----CSGGGTTTGGG-------CSEEEEECSCTTC---CCCCTT
T ss_pred CEEEEccccchhHHHHHHHHHHcCCeEE-EEecCCC----CHHHHHHHHhc-------CCEEEEeeecCCC-CCcccchH
Confidence 66665432211 23455666787753 3444321 33555554432 3444443 5543 4654433
Q ss_pred --HHHHHHHHHHHHc--CCEEEEc
Q 009517 290 --ENQRAIVDFCKKE--GLVLLAD 309 (533)
Q Consensus 290 --~~l~~i~~l~~~~--~~~lI~D 309 (533)
+.++++.+++.++ ++.|-+|
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VD 201 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEID 201 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEE
Confidence 4566666666654 4777788
No 352
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=49.66 E-value=38 Score=30.82 Aligned_cols=97 Identities=22% Similarity=0.149 Sum_probs=53.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..- .........+.++..+..|-. |.+.+++.++...+.| +
T Consensus 10 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~g-~ 79 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLL-DAGAQVVVLDI---RGEDVVADLGDRARFAAADVT-----DEAAVASALDLAETMG-T 79 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HHTCEEEEEES---SCHHHHHHTCTTEEEEECCTT-----CHHHHHHHHHHHHHHS-C
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeC---chHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHhC-C
Confidence 345666555444445555565 56777776543 234455566777777777643 6777777766543322 4
Q ss_pred eeEEEEeCCC-CCCc-c-----CCCHHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG-Q-----VLAEENQRAIVDF 298 (533)
Q Consensus 271 ~~~iil~~p~-NPtG-~-----~~s~~~l~~i~~l 298 (533)
...++ ++.. ...+ . ..+.++|+++.+.
T Consensus 80 id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 80 LRIVV-NCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EEEEE-ECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 55444 4432 1111 1 2566777776553
No 353
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=49.50 E-value=93 Score=28.57 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=54.9
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCC---eEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG---TLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
....+++|.|+...-..+.+.|. ..|.+|++..-.-...... +...+. ++..+..|-. |.+.+++.++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 83 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLV-AAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT-----NEDETARAVD 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTT-----SHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC-----CHHHHHHHHH
Confidence 33456666665555555666666 5787777765332222222 233343 6777776532 6788877776
Q ss_pred HHHhcCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINPG--NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~ 297 (533)
.......+...++ ++.. .+.+ ...+.++|+++.+
T Consensus 84 ~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (281)
T 3svt_A 84 AVTAWHGRLHGVV-HCAGGSENIGPITQVDSEAWRRTVD 121 (281)
T ss_dssp HHHHHHSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHHH
Confidence 6432222455454 4432 2222 3467777776654
No 354
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=49.46 E-value=70 Score=28.94 Aligned_cols=100 Identities=16% Similarity=0.129 Sum_probs=52.4
Q ss_pred EEEcCChHHHHH-HHHHHhccCC--CCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 193 IFLTDGASPAVH-MMMQLLIRSE--NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 193 i~~t~G~~~al~-~~~~~l~~~~--gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
+++.+|++.++- .+.+.|. .. |-.|++..-.-.......+..|.++..+..|-. |.+.+++.++...+...
T Consensus 4 ~~lVTGas~GIG~aia~~l~-~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLF-SLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDIT-----EDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHH-HHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTT-----SHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHH-hcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCC-----CHHHHHHHHHHHHHhcC
Confidence 444444444444 4444454 33 456666544333344445555777777777633 67777777765433222
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
+...++-+--. .+.+ ...+.++|++..+.
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDI 109 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHH
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHH
Confidence 45555544222 2322 24577777776553
No 355
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=49.24 E-value=46 Score=30.33 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=54.3
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|++..-..+.+.|. +.|-+|++.+-.-... ....+.++..+..|-. |.+.+++.+++. | +
T Consensus 12 K~alVTGas~GIG~aia~~la-~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~---g-~ 78 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFA-ELGAEVVALGLDADGV---HAPRHPRIRREELDIT-----DSQRLQRLFEAL---P-R 78 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTTST---TSCCCTTEEEEECCTT-----CHHHHHHHHHHC---S-C
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHH---hhhhcCCeEEEEecCC-----CHHHHHHHHHhc---C-C
Confidence 345555555444445555555 6787887765332211 1233556667766532 688888888764 2 3
Q ss_pred eeEEEEeCCC-CCCccCCCHHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTGQVLAEENQRAIVDF 298 (533)
Q Consensus 271 ~~~iil~~p~-NPtG~~~s~~~l~~i~~l 298 (533)
.. ++++|.. +.....++.++|+++.++
T Consensus 79 iD-iLVNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 79 LD-VLVNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp CS-EEEECCCCCCGGGGGSHHHHHHHHHH
T ss_pred CC-EEEECCCCCCCcccCCHHHHHHHHHH
Confidence 43 4556652 333456778888887664
No 356
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=49.20 E-value=95 Score=28.08 Aligned_cols=102 Identities=19% Similarity=0.166 Sum_probs=51.8
Q ss_pred CCCCCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCcc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 188 ADPNDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 188 ~~~~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
.+...|++|.|+ ...-..+.+.|. ..|.+|++..-.-.. ........+ .+..+..|- -|.+.+++.++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv-----~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACK-REGAELAFTYVGDRFKDRITEFAAEFG-SELVFPCDV-----ADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCT-----TCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHH-HcCCCEEEEecchhhHHHHHHHHHHcC-CcEEEECCC-----CCHHHHHHHHH
Confidence 334566666654 344445555565 568777765433111 122222233 355555553 26788888777
Q ss_pred HHHhcCCCeeEEEEeCCC-CCC----cc---CCCHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINPG-NPT----GQ---VLAEENQRAIVD 297 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p~-NPt----G~---~~s~~~l~~i~~ 297 (533)
...+...+...+| ++.. .+. +. ..+.+++++..+
T Consensus 85 ~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (271)
T 3ek2_A 85 SLKTHWDSLDGLV-HSIGFAPREAIAGDFLDGLTRENFRIAHD 126 (271)
T ss_dssp HHHHHCSCEEEEE-ECCCCCCGGGGSSCTTTTCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCccCccccccCccccccCHHHHHHHHh
Confidence 6544333565554 4432 211 21 256666766554
No 357
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=48.93 E-value=1.3e+02 Score=26.93 Aligned_cols=103 Identities=7% Similarity=-0.021 Sum_probs=52.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---H-hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-HGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~-~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-........ . .+.++..+..+-. .-|.+.+++.++....
T Consensus 13 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYA-RYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL---TCTSENCQQLAQRIAV 88 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTT---TCCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecc---cCCHHHHHHHHHHHHH
Confidence 345666555554455556665 578778776543322222222 1 2334555555431 1367777777765433
Q ss_pred cCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 267 KGITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 267 ~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
...+...+| ++.. .+.+ ...+.++|+++.++
T Consensus 89 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 89 NYPRLDGVL-HNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp HCSCCSEEE-ECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred hCCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHhh
Confidence 333555554 4442 2222 24567777766553
No 358
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=48.87 E-value=1.1e+02 Score=28.19 Aligned_cols=99 Identities=12% Similarity=0.083 Sum_probs=50.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~---g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-.......... | ++..+..|- -|.+.+++.++.....
T Consensus 30 k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLL-EAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQALGEL 102 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHHHHHHh
Confidence 456666555444455555665 57877777653322222222222 3 555555543 2678888777654332
Q ss_pred CCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
..+...+| ++.. ...+ ...+.++|+++.+
T Consensus 103 ~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 103 SARLDILV-NNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp CSCCSEEE-ECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 22455554 4432 2112 2345566666554
No 359
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=48.69 E-value=45 Score=29.66 Aligned_cols=97 Identities=16% Similarity=0.069 Sum_probs=54.6
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|-. |.+.+++.++.... ..
T Consensus 3 ~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~---~~ 73 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYD-AEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLA-----SHQEVEQLFEQLDS---IP 73 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTT-----CHHHHHHHHHSCSS---CC
T ss_pred EEEEecCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCC-----CHHHHHHHHHHHhh---cC
Confidence 46777666555555666666 57877777655433444444555556666665532 68888888765311 12
Q ss_pred eEEEEeCCC-CCCcc--CCCHHHHHHHHHH
Q 009517 272 RALVVINPG-NPTGQ--VLAEENQRAIVDF 298 (533)
Q Consensus 272 ~~iil~~p~-NPtG~--~~s~~~l~~i~~l 298 (533)
. +++++.. .+.+. ..+.++++++.+.
T Consensus 74 d-~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 74 S-TVVHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp S-EEEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred C-EEEEeCCcCCCCccccCCHHHHHHHHHH
Confidence 3 4455542 22222 4566777766553
No 360
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=48.61 E-value=84 Score=29.68 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=54.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCC--eEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~--~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..|++|.|+...-..+.+.|. ..|-.|++..-.-...... +...|. ++..+..|-. |.+.++++++...
T Consensus 9 k~vlVTGas~gIG~~la~~l~-~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLL-NQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA-----SREGFKMAADEVE 82 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCC-----CHHHHHHHHHHHH
Confidence 456666555444455556665 5787777765433322222 233344 6777776633 6788888777654
Q ss_pred hcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
....+...+| ++.. .+.+ ...+.++++++.+
T Consensus 83 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 116 (319)
T 3ioy_A 83 ARFGPVSILC-NNAGVNLFQPIEESSYDDWDWLLG 116 (319)
T ss_dssp HHTCCEEEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhCCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 3333555554 4442 2222 2346666766554
No 361
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=48.58 E-value=1.4e+02 Score=26.29 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=50.6
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
|++|.|+...-..+.+.|. ..|.+|++. .-.-.... ..+...+.++..+..|-. |.+.+++.++...+..
T Consensus 4 vlVTGasggiG~~la~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 4 VVVTGASRGIGKAIALSLG-KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS-----KEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTT-----SHHHHHHHHHHHHHHS
T ss_pred EEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCC-----CHHHHHHHHHHHHHHc
Confidence 5666555444455556666 567777663 32211111 123334677777776532 6788888776543322
Q ss_pred CCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
.+...+|-+--....+ ...+.+++++..+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 2455555332222222 2345566665443
No 362
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=48.49 E-value=1.2e+02 Score=27.60 Aligned_cols=100 Identities=14% Similarity=0.063 Sum_probs=50.5
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.|. ..|-.|++.. ..-..... .....+.++..+..|-. |.+.+++.++...+.
T Consensus 27 ~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLH-DAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA-----DFESCERCAEKVLAD 100 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHH-TTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 34555444444445556666 6787777654 22111111 22334666777776533 677777777654332
Q ss_pred CCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
..+...+|.+--....+ ...+.++++++.+
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 132 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMR 132 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 22455554332222222 2356666766544
No 363
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=48.43 E-value=38 Score=30.51 Aligned_cols=69 Identities=9% Similarity=-0.017 Sum_probs=41.4
Q ss_pred CCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 009517 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~ 263 (533)
....|++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..+-. |.+.+++.++.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 81 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLH-KLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLA-----NKEECSNLISK 81 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT-----SHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCC-----CHHHHHHHHHh
Confidence 34456666655555555556666 57878887665444444455555555666555532 67888887765
No 364
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=48.09 E-value=1e+02 Score=28.10 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=51.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---Hh--CCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LH--GGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~~--g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
...+++|.|+...-..+.+.|. ..|-+|++..-.-........ .. +..+..+..|-. |.+.+++.++..
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~ 83 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLV-AEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG-----TEQGCQDVIEKY 83 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT-----SHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC-----CHHHHHHHHHhc
Confidence 3456666555554455556666 578777776543222222222 22 456666666533 678888877653
Q ss_pred HhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 265 KAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.+...++ ++.. ...+ ...+.++|+++.+
T Consensus 84 ----g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 84 ----PKVDILI-NNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp ----CCCSEEE-ECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred ----CCCCEEE-ECCCCCCCCccccCCHHHHHHHHH
Confidence 1444444 4432 1111 2456677666544
No 365
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=48.03 E-value=83 Score=28.61 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=52.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcch---HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~---~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.+. +.|..|++. .-.-... ...+...+.++..+..|-. |.+.+++.++....
T Consensus 27 k~vlVTGas~gIG~~la~~l~-~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLA-ADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVA-----NREQCREVLEHEIA 100 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHH
Confidence 346666555555555666666 578777553 2221111 2233345667777776633 67887777765432
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+| ++.. ...+ ...+.+++++..+
T Consensus 101 ~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 101 QHGAWYGVV-SNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp HHCCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhCCccEEE-ECCCCCCCCccccCCHHHHHHHHH
Confidence 222455554 4432 2222 2456677776554
No 366
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=48.02 E-value=1.4e+02 Score=26.73 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=49.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. +.|.+|++..-.-.. .......+ . ..+..|- -|.+.+++.++.......+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFA-REGALVALCDLRPEG-KEVAEAIG-G-AFFQVDL-----EDERERVRFVEEAAYALGR 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeC-----CCHHHHHHHHHHHHHHcCC
Confidence 456666555555555566666 578777765433222 33333333 2 4444442 2677777777654221124
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...++ ++.. .+.+ ...+.++|+++.+
T Consensus 78 iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 78 VDVLV-NNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 55554 4432 2222 2356666666554
No 367
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=47.86 E-value=1.1e+02 Score=27.02 Aligned_cols=100 Identities=10% Similarity=0.013 Sum_probs=50.1
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCC-------eEEEcCCcCcchHHHH---HHhCCeEEEEecCCCCCCCCCHHHHHHHH
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSEND-------GILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd-------~Vlv~~p~~~~~~~~~---~~~g~~~~~v~~~~~~~~~ld~~~l~~~i 261 (533)
.|++|.|+...-..+.+.|. ..|. .|++..-.-....... ...+.++..+..|-. |.+.+++.+
T Consensus 4 ~vlITGasggiG~~la~~l~-~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 77 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFA-RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADIS-----DMADVRRLT 77 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTT-----SHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCC-----CHHHHHHHH
Confidence 35666555444445555555 4565 6666543222222222 223667777776532 678888777
Q ss_pred HHHHhcCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 262 EAAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
+...+...+...||.+--..+.+ ...+.+++++..+
T Consensus 78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (244)
T 2bd0_A 78 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115 (244)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHH
Confidence 65433223455555442222222 1345666665544
No 368
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=47.48 E-value=88 Score=28.84 Aligned_cols=82 Identities=11% Similarity=-0.012 Sum_probs=42.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcC-cchHHH---HH-HhCCeEEEEecCCCCCCCCC----HHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSAS---IA-LHGGTLVPYYLDEATGWGLE----TSEVKKQL 261 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~-~~~~~~---~~-~~g~~~~~v~~~~~~~~~ld----~~~l~~~i 261 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.- ...... +. ..|.++..+..|-. | .+.+++.+
T Consensus 24 k~~lVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLH-QTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLT-----NSNVLPASCEEII 97 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----CSTTHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecC-----CccCCHHHHHHHH
Confidence 345665555444455555565 5677777654332 222222 22 34667777776533 5 67777776
Q ss_pred HHHHhcCCCeeEEEEeCC
Q 009517 262 EAAKAKGITVRALVVINP 279 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~~p 279 (533)
+.......+...+| ++.
T Consensus 98 ~~~~~~~g~iD~lv-nnA 114 (288)
T 2x9g_A 98 NSCFRAFGRCDVLV-NNA 114 (288)
T ss_dssp HHHHHHHSCCCEEE-ECC
T ss_pred HHHHHhcCCCCEEE-ECC
Confidence 65422222455454 444
No 369
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.27 E-value=73 Score=29.16 Aligned_cols=81 Identities=11% Similarity=-0.018 Sum_probs=40.5
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh------CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH------GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~------g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-.......... +.++..+..|-. |.+.+++.++...
T Consensus 8 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~ 81 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFA-REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT-----TDAGQDEILSTTL 81 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccC-----CHHHHHHHHHHHH
Confidence 45565554444445555565 57877776543222222222222 345666666532 6777777776532
Q ss_pred hcCCCeeEEEEeCC
Q 009517 266 AKGITVRALVVINP 279 (533)
Q Consensus 266 ~~g~~~~~iil~~p 279 (533)
..-.+...+| ++.
T Consensus 82 ~~~g~id~lv-~~A 94 (278)
T 1spx_A 82 GKFGKLDILV-NNA 94 (278)
T ss_dssp HHHSCCCEEE-ECC
T ss_pred HHcCCCCEEE-ECC
Confidence 2112444444 443
No 370
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=47.13 E-value=2.2e+02 Score=28.14 Aligned_cols=44 Identities=16% Similarity=0.004 Sum_probs=28.0
Q ss_pred HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC-CCeeEEEEeCC
Q 009517 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG-ITVRALVVINP 279 (533)
Q Consensus 230 ~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g-~~~~~iil~~p 279 (533)
..++..|.+...+..|- -|.+.+++.++.....- .+... +++|.
T Consensus 116 ~~~~~~G~~a~~i~~Dv-----td~~~v~~~v~~i~~~~~G~IDi-LVNNA 160 (422)
T 3s8m_A 116 KHAKAAGLYSKSINGDA-----FSDAARAQVIELIKTEMGGQVDL-VVYSL 160 (422)
T ss_dssp HHHHHTTCCEEEEESCT-----TSHHHHHHHHHHHHHHSCSCEEE-EEECC
T ss_pred HHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHcCCCCCE-EEEcC
Confidence 44566788888888764 37888888777654432 35554 45554
No 371
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=46.79 E-value=1.3e+02 Score=27.34 Aligned_cols=100 Identities=13% Similarity=0.076 Sum_probs=50.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~--~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..........+. ++..+..|-. |.+.+++.++......
T Consensus 17 k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFV-RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVT-----KDEDVRNLVDTTIAKH 90 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 456776665555555666666 5677777654322222222233322 4556665532 6777777776532211
Q ss_pred CCeeEEEEeCCCC--C-Cc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPGN--P-TG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~N--P-tG--~~~s~~~l~~i~~ 297 (533)
.+...|| ++... + .+ ...+.+++++..+
T Consensus 91 ~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~ 123 (278)
T 2bgk_A 91 GKLDIMF-GNVGVLSTTPYSILEAGNEDFKRVMD 123 (278)
T ss_dssp SCCCEEE-ECCCCCCSSCSSTTTCCHHHHHHHHH
T ss_pred CCCCEEE-ECCcccCCCCCChhhCCHHHHHHHHH
Confidence 2455554 43321 1 11 2345566666554
No 372
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=46.77 E-value=86 Score=25.79 Aligned_cols=109 Identities=14% Similarity=0.152 Sum_probs=64.4
Q ss_pred CCCCCCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 187 PADPNDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 187 ~~~~~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
.++...|+++-+- .+.+..+.+.+. +-|=+|+....+ ...++..|..+..+.--.+++-.-+...+.+.|++.
T Consensus 21 ~lP~~gvliSv~d~dK~~l~~~a~~l~-~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g 95 (143)
T 2yvq_A 21 KIPQKGILIGIQQSFRPRFLGVAEQLH-NEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDG 95 (143)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHHHH-TTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTT
T ss_pred CCCCCCEEEEecccchHHHHHHHHHHH-HCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCC
Confidence 3433347777665 666666667776 667777766655 335567888887775332210000002366666662
Q ss_pred HhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
+..+| ++.|.. . .-+..+-..|++.|-+|++.++..
T Consensus 96 -----~i~lV-Int~~~-~--~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 96 -----SIDLV-INLPNN-N--TKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp -----SCCEE-EECCCC-C--GGGHHHHHHHHHHHHHTTCCEECS
T ss_pred -----CceEE-EECCCC-C--CcCCccHHHHHHHHHHhCCCeEcC
Confidence 55544 465532 1 223667889999999999998754
No 373
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=46.62 E-value=95 Score=29.30 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=44.8
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
-|+++.|+ .+++..+-.+-- ..-|.|++..|.|... +.+.+.+..+.-.+..
T Consensus 83 pViaGvg~~st~~ai~la~~A~~-~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 83 PVIVGAGTNSTEKTLKLVKQAEK-LGANGVLVVTPYYNKP------------------------TQEGLYQHYKYISERT 137 (306)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHH-HTCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHTTC
T ss_pred eEEEcCCCccHHHHHHHHHHHHh-cCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHhC
Confidence 37777665 666665555432 2338899999988531 2344444333322111
Q ss_pred CCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 269 ITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+...++.+.|. .||+.++.+.+.+|+
T Consensus 138 -~lPiilYn~P~-~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 138 -DLGIVVYNVPG-RTGVNVLPETAARIA 163 (306)
T ss_dssp -SSCEEEEECHH-HHSCCCCHHHHHHHH
T ss_pred -CCCEEEEeCcc-ccCcCCCHHHHHHHH
Confidence 34466666666 478888877666654
No 374
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=46.08 E-value=1.5e+02 Score=26.99 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=51.8
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.+++|.|+...-..+.+.|. ..|-.|++. .-.-.. ....+...+.++..+..|-. |.+.+++.++...+.
T Consensus 28 ~vlITGas~gIG~a~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAA-RQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVG-----NAADIAAMFSAVDRQ 101 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 35555544444445555565 578777654 322221 22233445778888877643 677777777664332
Q ss_pred CCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG--NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~ 297 (533)
..+...+| ++.. .+.+ ...+.+++++..+
T Consensus 102 ~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 102 FGRLDGLV-NNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp HSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCCEEE-ECCCCCCCCCChhhCCHHHHHHHHh
Confidence 22455554 4432 1112 2346666666554
No 375
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=46.07 E-value=1.2e+02 Score=26.99 Aligned_cols=102 Identities=11% Similarity=0.071 Sum_probs=50.3
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-...... +...+ ..+..+..+-+ .-|.+.+++.++....
T Consensus 15 k~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d---~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYA-AHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE---NATAQQYRELAARVEH 90 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTT---TCCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccc---cCCHHHHHHHHHHHHH
Confidence 345666555554555556666 5787777765443322222 22233 33444444322 2367777776665432
Q ss_pred cCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG--NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+| ++.. .+.+ ...+.+++++..+
T Consensus 91 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 124 (247)
T 3i1j_A 91 EFGRLDGLL-HNASIIGPRTPLEQLPDEDFMQVMH 124 (247)
T ss_dssp HHSCCSEEE-ECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred hCCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHH
Confidence 222455554 4432 2322 2356677776554
No 376
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=45.63 E-value=1.4e+02 Score=27.00 Aligned_cols=100 Identities=12% Similarity=-0.017 Sum_probs=50.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC-cCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..|++|.|+...-..+.+.|. +.|.+|++..- .-.... ..+...|.++..+..|-. |.+.+++.++....
T Consensus 22 k~vlItGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELG-RRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS-----KPSEVVALFDKAVS 95 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 346666555444455566666 56777766433 211111 222334677777776532 67777777764322
Q ss_pred cCCCeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
.-.+...|| ++. ..+.+ ...+.+++++..+
T Consensus 96 ~~~~~d~vi-~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 96 HFGGLDFVM-SNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHSCEEEEE-CCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCcccccCCHHHHHHHHH
Confidence 112455554 333 22222 1345566665544
No 377
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=45.48 E-value=1.4e+02 Score=26.80 Aligned_cols=101 Identities=10% Similarity=-0.015 Sum_probs=50.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..|++|.|+...-..+.+.|. +.|..|++..-.-...... +...+.++..+..|-. |.+.+++.++.....
T Consensus 15 k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFA-GFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDAS-----LRPEREKLMQTVSSM 88 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 456666555444455566666 5677777654322212222 2233666666666532 677777777653221
Q ss_pred C-CCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 268 G-ITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g-~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
- .+...||-+--..+.+ ...+.+++++..+
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1 2456665443222222 2346666665544
No 378
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=45.45 E-value=1.3e+02 Score=28.13 Aligned_cols=87 Identities=11% Similarity=0.225 Sum_probs=50.7
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
-|+++.|+ .+++..+-.+- +.| |-|++..|.|... +.+.+.+..+.-.+.
T Consensus 83 pViaGvg~~~t~~ai~la~~A~--~~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~va~a 136 (301)
T 1xky_A 83 PVIAGTGSNNTHASIDLTKKAT--EVGVDAVMLVAPYYNKP------------------------SQEGMYQHFKAIAES 136 (301)
T ss_dssp CEEEECCCSCHHHHHHHHHHHH--HTTCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHHT
T ss_pred eEEeCCCCCCHHHHHHHHHHHH--hcCCCEEEEcCCCCCCC------------------------CHHHHHHHHHHHHHh
Confidence 37777664 66666655544 345 8999999988531 234444433332211
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
. +...++.+.|. -||+.++.+.+.+|++ -.|+.=|=|
T Consensus 137 ~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKd 173 (301)
T 1xky_A 137 T-PLPVMLYNVPG-RSIVQISVDTVVRLSE---IENIVAIKD 173 (301)
T ss_dssp C-SSCEEEEECHH-HHSSCCCHHHHHHHHT---STTEEEEEE
T ss_pred c-CCCEEEEeCcc-ccCCCCCHHHHHHHHc---CCCEEEEEc
Confidence 2 34567777776 4889999777777653 234544544
No 379
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=44.92 E-value=96 Score=29.88 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=52.0
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh-c
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA-K 267 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~-~ 267 (533)
-|+++.|+ .+++..+-.+-- ..-|.|++..|.|... ++.+.+.+..+...+ .
T Consensus 94 pViaGvg~~st~eai~la~~A~~-~Gadavlv~~P~y~~~-----------------------~s~~~l~~~f~~IA~aa 149 (344)
T 2hmc_A 94 PVIVGTGAVNTASAVAHAVHAQK-VGAKGLMVIPRVLSRG-----------------------SVIAAQKAHFKAILSAA 149 (344)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHH-HTCSEEEECCCCSSST-----------------------TCHHHHHHHHHHHHHHS
T ss_pred cEEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCccCCC-----------------------CCHHHHHHHHHHHHhhC
Confidence 47777664 566666555442 2238999999988530 123344433333221 1
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
. +...++.+.| .||+.++.+.+.+|+ ++--|+.=|=|
T Consensus 150 ~-~lPiilYn~P--~tg~~l~~e~~~~L~--a~~pnIvGiKd 186 (344)
T 2hmc_A 150 P-EIPAVIYNSP--YYGFATRADLFFALR--AEHKNLVGFKE 186 (344)
T ss_dssp T-TSCEEEEEBG--GGTBCCCHHHHHHHH--HHCTTEEEEEE
T ss_pred C-CCcEEEEecC--ccCCCcCHHHHHHHH--hcCCCEEEEEc
Confidence 1 4557788888 799999988877762 22235554544
No 380
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=44.83 E-value=90 Score=32.05 Aligned_cols=102 Identities=16% Similarity=0.200 Sum_probs=55.8
Q ss_pred CCCCEEEcCChHHHHHHHH-HHhccCCCCe-EEEc-CCc----------------CcchHHHHHHhCCeEEEEecCCCCC
Q 009517 189 DPNDIFLTDGASPAVHMMM-QLLIRSENDG-ILCP-IPQ----------------YPLYSASIALHGGTLVPYYLDEATG 249 (533)
Q Consensus 189 ~~~~i~~t~G~~~al~~~~-~~l~~~~gd~-Vlv~-~p~----------------~~~~~~~~~~~g~~~~~v~~~~~~~ 249 (533)
.++.+++.+|++.+|-..+ +.|. ..|.. |++. .-. -......+...|.++..+.+|-.
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La-~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt-- 325 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLA-RDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT-- 325 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHH-HHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT--
T ss_pred cCCCEEEEECCCCcHHHHHHHHHH-HcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC--
Confidence 3456666666666655544 4444 45644 5554 221 11233345556889988888743
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 250 ~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
|.+.+++.++... ...+...||-+--....+ ...+.++++++.+
T Consensus 326 ---d~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 326 ---DAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp ---SHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 7889998887643 222455555332222222 2456677766554
No 381
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=44.68 E-value=1.2e+02 Score=27.08 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=50.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC-cCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..|++|.|+...-..+.+.+. ..|.+|++..- .-.... ..+...+.++..+..|-. |.+.+++.++...+
T Consensus 8 k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFA-TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVT-----VESDVINLVQSAIK 81 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHH
Confidence 346666555444455555665 56777776543 211111 122334667777776533 67777777665322
Q ss_pred cCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
.-.+...||-+-...+.+ ...+.+++++..+
T Consensus 82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 212455554332222222 2345566655443
No 382
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=44.53 E-value=1.1e+02 Score=27.73 Aligned_cols=82 Identities=17% Similarity=0.139 Sum_probs=43.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..... .+...|.++..+..|-. |.+.+++.++.....
T Consensus 6 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLC-KAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSS-----QESEVRSLFEQVDRE 79 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCC-----CHHHHHHHHHHHHHh
Confidence 345555555444455555565 578777775432222222 22334677777776633 678888777664321
Q ss_pred -CCCeeEEEEeCC
Q 009517 268 -GITVRALVVINP 279 (533)
Q Consensus 268 -g~~~~~iil~~p 279 (533)
..+...+ +++.
T Consensus 80 ~~g~id~l-vnnA 91 (260)
T 2qq5_A 80 QQGRLDVL-VNNA 91 (260)
T ss_dssp HTTCCCEE-EECC
T ss_pred cCCCceEE-EECC
Confidence 1244544 4444
No 383
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=44.52 E-value=1.1e+02 Score=28.04 Aligned_cols=101 Identities=19% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---H-hCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-HGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~-~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|-+|++..-.-........ . .+..+..+..|-. |.+.+++.++....
T Consensus 34 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALS-AEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVG-----DPDQVAALFAAVRA 107 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345555554444444555565 578777776543222222222 1 2333456665532 67777777765432
Q ss_pred cCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 267 KGITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 267 ~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
...+...+| ++.. .+.+ ...+.++|+++.++
T Consensus 108 ~~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~~v 142 (281)
T 4dry_A 108 EFARLDLLV-NNAGSNVPPVPLEEVTFEQWNGIVAA 142 (281)
T ss_dssp HHSCCSEEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 222455554 4442 1212 24677777776553
No 384
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=44.49 E-value=1.4e+02 Score=27.86 Aligned_cols=87 Identities=18% Similarity=0.248 Sum_probs=49.0
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
-|+++.|+ .+++..+-.+-. .| |-|++..|.|... +.+.+.+..+.-.+.
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~--~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~ia~a 124 (292)
T 2vc6_A 71 PVIAGAGSNSTAEAIAFVRHAQN--AGADGVLIVSPYYNKP------------------------TQEGIYQHFKAIDAA 124 (292)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHH--TTCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHHH
T ss_pred cEEEecCCccHHHHHHHHHHHHH--cCCCEEEEcCCCCCCC------------------------CHHHHHHHHHHHHHh
Confidence 37777664 666666555543 45 8999999988531 223333332221111
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEc
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-GLVLLAD 309 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~-~~~lI~D 309 (533)
. +...++.+.|. .||+.++.+.+.+|+ +++ |+.=|=|
T Consensus 125 ~-~lPiilYn~P~-~tg~~l~~~~~~~La---~~~pnIvgiK~ 162 (292)
T 2vc6_A 125 S-TIPIIVYNIPG-RSAIEIHVETLARIF---EDCPNVKGVXD 162 (292)
T ss_dssp C-SSCEEEEECHH-HHSCCCCHHHHHHHH---HHCTTEEEEEE
T ss_pred C-CCCEEEEeCcc-ccCcCCCHHHHHHHH---hhCCCEEEEec
Confidence 1 34566667666 488888877766654 323 4444444
No 385
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=44.41 E-value=1.4e+02 Score=26.81 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=51.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+...-..+.+.|. ..|..|++..-.-..... .+...|.++..+..|-. |.+.+++.++...+.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLA-QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG-----KAEDRERLVAMAVNL 88 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 446666555444455555665 578777765432222222 22334666766666532 677777776653221
Q ss_pred CCCeeEEEEeCCC-CC-Cc--cCCCHHHHHHHHH
Q 009517 268 GITVRALVVINPG-NP-TG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~~~~~iil~~p~-NP-tG--~~~s~~~l~~i~~ 297 (533)
..+...+| ++.. .+ .+ ...+.++|+++.+
T Consensus 89 ~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 89 HGGVDILV-SNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp HSCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 12455554 4432 21 12 2456666766554
No 386
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=44.37 E-value=68 Score=28.94 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=51.2
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~ 272 (533)
+++|.|+...-..+.+.|. ..|.+|++..-.-..........+.++..+..|- -|.+.+++.++.......+..
T Consensus 3 vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFI-QQGHKVIATGRRQERLQELKDELGDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp EEETTTTSTTHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCCC
T ss_pred EEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCC
Confidence 4555444444444555555 5787777754332223333444455666676653 278888888875322222344
Q ss_pred EEEEeCCCC--CCc--cCCCHHHHHHHHH
Q 009517 273 ALVVINPGN--PTG--QVLAEENQRAIVD 297 (533)
Q Consensus 273 ~iil~~p~N--PtG--~~~s~~~l~~i~~ 297 (533)
.+ +++..- +.+ ...+.++|+++.+
T Consensus 77 ~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 77 IL-VNNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp EE-EECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EE-EECCCcCCCCCchhhCCHHHHHHHHH
Confidence 44 454421 112 2456677766554
No 387
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=44.32 E-value=1.4e+02 Score=27.56 Aligned_cols=100 Identities=12% Similarity=0.161 Sum_probs=51.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHH---H-----hCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-----HGGTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~---~-----~g~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
..|++|.|+...-..+.+.|. ..|.+|++..-.-........ . .+.++..+..|-. |.+.+++.++
T Consensus 19 k~vlVTGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 92 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELL-ELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR-----NEEEVNNLVK 92 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT-----CHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC-----CHHHHHHHHH
Confidence 456666555554455566666 567777765433222222221 1 3566777776532 6777777776
Q ss_pred HHHhcCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.....-.+...|| ++.. .+.+ ...+.+++++..+
T Consensus 93 ~~~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 93 STLDTFGKINFLV-NNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 5322112455554 4332 2212 2346666665544
No 388
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=44.01 E-value=1.5e+02 Score=26.08 Aligned_cols=100 Identities=12% Similarity=0.032 Sum_probs=48.6
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcchHH---HHHHhCCeEEE-EecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSA---SIALHGGTLVP-YYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~~~---~~~~~g~~~~~-v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
.|++|.|+...-..+.+.|. +.|.+|++. .-.-..... .+...|.++.. +..|- -|.+.+++.++....
T Consensus 3 ~vlITGasggiG~~~a~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLA-EDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL-----LEAEAATALVHQAAE 76 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHH-TTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccC-----CCHHHHHHHHHHHHH
Confidence 35666555454555566666 678777765 322111221 22233555544 55543 267777777665322
Q ss_pred cCCCeeEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
.-.+..+||-+-...+.+ ...+.+++++..+
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLE 109 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 112455555332222222 2345566655443
No 389
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=43.33 E-value=1.1e+02 Score=27.26 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=42.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. +.|.+|++. ...-.... ..+...+.++..+..|-. |.+.+++.++...+
T Consensus 6 ~~vlItGasggiG~~~a~~l~-~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLG-NMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVK-----NPEDVENMVKTAMD 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTT-----SHHHHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 356666555454455556666 567777765 32222222 223334667777776633 67788777765422
Q ss_pred cCCCeeEEE
Q 009517 267 KGITVRALV 275 (533)
Q Consensus 267 ~g~~~~~ii 275 (533)
...+...||
T Consensus 80 ~~~~~d~vi 88 (247)
T 2hq1_A 80 AFGRIDILV 88 (247)
T ss_dssp HHSCCCEEE
T ss_pred hcCCCCEEE
Confidence 222455554
No 390
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=43.03 E-value=1.9e+02 Score=26.45 Aligned_cols=100 Identities=12% Similarity=0.049 Sum_probs=51.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcc----hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-.. ....+...|.++..+..|-. |.+.+++.++...+
T Consensus 30 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG-----VVEDIVRMFEEAVK 103 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345665555444455555665 578777765432211 11223445777777776532 67777777665322
Q ss_pred cCCCeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
.-.+...+ +++.. ...+ ...+.++++++.+
T Consensus 104 ~~g~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 136 (283)
T 1g0o_A 104 IFGKLDIV-CSNSGVVSFGHVKDVTPEEFDRVFT 136 (283)
T ss_dssp HHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEE-EECCCcCCCCCcccCCHHHHHHHHH
Confidence 11144444 44442 2222 1346677766554
No 391
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=42.56 E-value=1e+02 Score=28.01 Aligned_cols=92 Identities=15% Similarity=0.166 Sum_probs=47.9
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.++...-..+.+.|. ..|.+|++..-.-.. +.++..+..|- -|.+.+++.++...+.-.+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~--------~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFV-DEGSKVIDLSIHDPG--------EAKYDHIECDV-----TNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESSCCC--------SCSSEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEecCccc--------CCceEEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 456666665555555666666 568777764322111 33444555542 2677777777654222224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
..++| ++.. ...+ ...+.++|+++.+
T Consensus 75 iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 75 ISVLV-NNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp CCEEE-ECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 55554 4432 2222 2346677766654
No 392
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=42.39 E-value=49 Score=30.98 Aligned_cols=74 Identities=12% Similarity=0.270 Sum_probs=46.3
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|.|..+..+.......++.+-+.+ ..-.+.++++++. ..+++++... | ++.++.++|.+.|+++
T Consensus 51 ~vy~sl~el~~~~~~D~viI~tP~----~~~~~~~~ea~~~------Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~ 114 (288)
T 2nu8_A 51 PVFNTVREAVAATGATASVIYVPA----PFCKDSILEAIDA------GIKLIITITE----G--IPTLDMLTVKVKLDEA 114 (288)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCG----GGHHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHHHH
T ss_pred eccCCHHHHhhcCCCCEEEEecCH----HHHHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHHc
Confidence 456666666654344444433322 2246667777765 5666554333 3 3567788999999999
Q ss_pred CCEEEEcccc
Q 009517 303 GLVLLADEVY 312 (533)
Q Consensus 303 ~~~lI~De~y 312 (533)
++.++-....
T Consensus 115 gv~liGPNc~ 124 (288)
T 2nu8_A 115 GVRMIGPNTP 124 (288)
T ss_dssp TCEEECSSCC
T ss_pred CCEEEecCCc
Confidence 9988866644
No 393
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=42.19 E-value=34 Score=31.36 Aligned_cols=95 Identities=18% Similarity=0.223 Sum_probs=53.1
Q ss_pred CEEEcCChHHHHHH-HHHHhccCCCCeEEEcCCcC-cchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 192 DIFLTDGASPAVHM-MMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 192 ~i~~t~G~~~al~~-~~~~l~~~~gd~Vlv~~p~~-~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
.+.+.+|++.+|-. +.+.|. ..|-.|++.+-.- ......++..|.+...+..|-. |.+.+++.++. |
T Consensus 10 KvalVTGas~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~----g- 78 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLA-AAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTD----A- 78 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTT----T-
T ss_pred CEEEEeCcCCHHHHHHHHHHH-HcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHh----C-
Confidence 44444444455544 455555 6787777655322 2234556677888888877643 33344444332 2
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~l 298 (533)
+.. |+++|.. ++.+ ..++.++|+++.++
T Consensus 79 ~iD-iLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 79 GFD-ILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp CCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 343 5566652 2222 35788889888775
No 394
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=41.78 E-value=62 Score=30.31 Aligned_cols=78 Identities=13% Similarity=0.178 Sum_probs=44.1
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
-|+++.|+ .+++..+-.+-- ..-|-|++..|.|... +.+.+.+..+.-.+..
T Consensus 71 pviaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~ia~a~ 125 (289)
T 2yxg_A 71 QVIAGAGSNCTEEAIELSVFAED-VGADAVLSITPYYNKP------------------------TQEGLRKHFGKVAESI 125 (289)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHH-HTCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHHHC
T ss_pred cEEEeCCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHhc
Confidence 36777664 566665554432 2238899999988531 2233333332221111
Q ss_pred CCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 269 ITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
+...++.+.|.. ||+.++.+.+.+|+
T Consensus 126 -~lPiilYn~P~~-tg~~l~~~~~~~La 151 (289)
T 2yxg_A 126 -NLPIVLYNVPSR-TAVNLEPKTVKLLA 151 (289)
T ss_dssp -SSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred -CCCEEEEeCccc-cCcCCCHHHHHHHH
Confidence 345667677764 88888877666654
No 395
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=41.35 E-value=78 Score=29.66 Aligned_cols=77 Identities=14% Similarity=0.234 Sum_probs=44.0
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
-|+++.|+ .+++..+-.+- +.| |-|++..|.|... +.+.+.+..+.-.+.
T Consensus 71 pviaGvg~~~t~~ai~la~~A~--~~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~va~a 124 (294)
T 2ehh_A 71 KVIAGTGGNATHEAVHLTAHAK--EVGADGALVVVPYYNKP------------------------TQRGLYEHFKTVAQE 124 (294)
T ss_dssp EEEEECCCSCHHHHHHHHHHHH--HTTCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHHH
T ss_pred cEEEecCCCCHHHHHHHHHHHH--hcCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHh
Confidence 37776664 56666655544 345 8999999988531 223333333221111
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
. +...++.+.|.. ||+.++.+.+.+|+
T Consensus 125 ~-~lPiilYn~P~~-tg~~l~~~~~~~La 151 (294)
T 2ehh_A 125 V-DIPIIIYNIPSR-TCVEISVDTMFKLA 151 (294)
T ss_dssp C-CSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred c-CCCEEEEeCCcc-cCcCCCHHHHHHHH
Confidence 1 344666677763 78888877666654
No 396
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=41.29 E-value=1e+02 Score=27.59 Aligned_cols=99 Identities=17% Similarity=0.080 Sum_probs=50.1
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.+++|.|+...-..+.+.|. ..|.+|++..-.-......... ..+...+..|- -|.+.+++.++...+...+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 76 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSADFAKE-RPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTT-CTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHh-cccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 35666655555555566666 5787887765332222222222 22344555542 26777777776543222245
Q ss_pred eEEEEeCC-CCCCc--cCCCHHHHHHHHHH
Q 009517 272 RALVVINP-GNPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 272 ~~iil~~p-~NPtG--~~~s~~~l~~i~~l 298 (533)
..++ ++. ..+.+ ...+.++++++.+.
T Consensus 77 d~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 77 DVLV-NNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CEEE-ECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5554 444 22222 24566777766543
No 397
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=40.87 E-value=97 Score=28.27 Aligned_cols=82 Identities=9% Similarity=-0.028 Sum_probs=43.2
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
...+++|.|+...-..+.+.|. ..|..|++..-.-.... ..+...+.++..+..|- -|.+.+++.++...+
T Consensus 34 ~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYA-QAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI-----SDPKSVEETISQQEK 107 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHH-HHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeec-----CCHHHHHHHHHHHHH
Confidence 3456666555444445555565 46767766543322222 22333466777776653 267777777765322
Q ss_pred cCCCeeEEEEe
Q 009517 267 KGITVRALVVI 277 (533)
Q Consensus 267 ~g~~~~~iil~ 277 (533)
...+...||-+
T Consensus 108 ~~g~id~li~~ 118 (279)
T 3ctm_A 108 DFGTIDVFVAN 118 (279)
T ss_dssp HHSCCSEEEEC
T ss_pred HhCCCCEEEEC
Confidence 11245555533
No 398
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=40.83 E-value=1.2e+02 Score=26.58 Aligned_cols=99 Identities=16% Similarity=0.038 Sum_probs=46.6
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.|++|.|+...-..+.+.|. ..|.+|++..-.-..........+ ++..+..|- -|.+.+++.++.......+.
T Consensus 7 ~vlVtGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLH-AKGYRVGLMARDEKRLQALAAELE-GALPLPGDV-----REEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHST-TCEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhh-hceEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 36666555444455556665 578777765432222222222222 333444442 26777777766532211144
Q ss_pred eEEEEeCCCCCCc--cCCCHHHHHHHHH
Q 009517 272 RALVVINPGNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 272 ~~iil~~p~NPtG--~~~s~~~l~~i~~ 297 (533)
..+|-+-...+.+ ...+.++++++.+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5554332222222 2345566665444
No 399
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=40.25 E-value=63 Score=30.36 Aligned_cols=79 Identities=19% Similarity=0.042 Sum_probs=43.7
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
-|+++.|+ .+++..+-.+- +-| |.|++..|.|... ++.+.+.+..+.-.+.
T Consensus 74 pviaGvg~~~t~~ai~la~~A~--~~Gadavlv~~P~y~~~-----------------------~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 74 RIVTGVLVDSIEDAADQSAEAL--NAGARNILLAPPSYFKN-----------------------VSDDGLFAWFSAVFSK 128 (294)
T ss_dssp GEEEEECCSSHHHHHHHHHHHH--HTTCSEEEECCCCSSCS-----------------------CCHHHHHHHHHHHHHH
T ss_pred cEEEeCCCccHHHHHHHHHHHH--hcCCCEEEEcCCcCCCC-----------------------CCHHHHHHHHHHHHHh
Confidence 37766554 66666655554 345 8999999988530 1223333333221111
Q ss_pred CC--CeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 268 GI--TVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 268 g~--~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
.+ +...++.+.|. .||+.++.+.+.+|+
T Consensus 129 ~p~~~lPiilYn~P~-~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 129 IGKDARDILVYNIPS-VTMVTLSVELVGRLK 158 (294)
T ss_dssp HCTTCCCEEEEECHH-HHSCCCCHHHHHHHH
T ss_pred cCCCCCcEEEEECcc-hhCcCCCHHHHHHHH
Confidence 11 23456666665 478888877666654
No 400
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=40.25 E-value=1.8e+02 Score=26.46 Aligned_cols=101 Identities=11% Similarity=0.086 Sum_probs=49.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHH---HHHHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~---~~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+...-..+.+.|. ..|-+|++..-.-..... .+...| .++..+..|- -|.+.+++.++...
T Consensus 33 k~vlVTGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALV-QQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-----SNEEDILSMFSAIR 106 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC-----CCHHHHHHHHHHHH
Confidence 346666555444455556665 568777765432222222 222233 4566666553 26777777776532
Q ss_pred hcCCCeeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~NPtG~--~~s~~~l~~i~~ 297 (533)
....+..+||-+....+.+. ..+.++++++.+
T Consensus 107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 140 (279)
T 1xg5_A 107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 140 (279)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 22124555543322222221 245566655443
No 401
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=40.11 E-value=1.1e+02 Score=28.56 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=50.7
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
-|+++.|+ .+++..+-.+-- ..-|-|++..|.|... +.+.+.+..+.-.+..
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~va~a~ 125 (297)
T 2rfg_A 71 PVIAGAGSNNPVEAVRYAQHAQQ-AGADAVLCVAGYYNRP------------------------SQEGLYQHFKMVHDAI 125 (297)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHH-HTCSEEEECCCTTTCC------------------------CHHHHHHHHHHHHHHC
T ss_pred eEEEccCCCCHHHHHHHHHHHHh-cCCCEEEEcCCCCCCC------------------------CHHHHHHHHHHHHHhc
Confidence 37777665 666666555442 2338999999988531 2233333332221111
Q ss_pred CCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
+...++.+.|.. ||+.++.+.+.+|++ -.++.=|=|
T Consensus 126 -~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKd 161 (297)
T 2rfg_A 126 -DIPIIVYNIPPR-AVVDIKPETMARLAA---LPRIVGVKD 161 (297)
T ss_dssp -SSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEE
T ss_pred -CCCEEEEeCccc-cCCCCCHHHHHHHHc---CCCEEEEEe
Confidence 345677777764 899999887777653 234444444
No 402
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=40.03 E-value=1.4e+02 Score=27.93 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=45.8
Q ss_pred CEEEcCCh---HHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGA---SPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~---~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
-|+++.|+ .+++..+-.+ . +.| |-|++..|.|... +.+.+.+..+.-.+.
T Consensus 72 pviaGvg~~~t~~ai~la~~a-~-~~Gadavlv~~P~y~~~------------------------s~~~l~~~f~~ia~a 125 (292)
T 2ojp_A 72 PVIAGTGANATAEAISLTQRF-N-DSGIVGCLTVTPYYNRP------------------------SQEGLYQHFKAIAEH 125 (292)
T ss_dssp CEEEECCCSSHHHHHHHHHHT-T-TSSCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHTT
T ss_pred cEEEecCCccHHHHHHHHHHH-H-hcCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHh
Confidence 37777665 5555544433 3 445 8999999988531 234444444332221
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHH
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIV 296 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~ 296 (533)
. +...++.+.|. .||+.++.+.+.+|+
T Consensus 126 ~-~lPiilYn~P~-~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 126 T-DLPQILYNVPS-RTGCDLLPETVGRLA 152 (292)
T ss_dssp C-SSCEEEECCHH-HHSCCCCHHHHHHHH
T ss_pred c-CCCEEEEeCcc-hhccCCCHHHHHHHH
Confidence 2 34466666666 489999977777765
No 403
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=39.88 E-value=50 Score=31.24 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=0.0
Q ss_pred EEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 193 IFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 193 i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
|+++.|+ .+++..+-.+-- ..-|.|++..|.|. .++.+.+.+..+.-.+..+
T Consensus 83 ViaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~------------------------~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 83 LIAHVGCVSTAESQQLAASAKR-YGFDAVSAVTPFYY------------------------PFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp EEEECCCSSHHHHHHHHHHHHH-HTCSEEEEECCCSS------------------------CCCHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCHHHHHHHHHHHHh-CCCCEEEecCCCCC------------------------CCCHHHHHHHHHHHHHhCC
Q ss_pred CeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 270 TVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
+...++.+.|. -||+.++.+.+.+|++
T Consensus 138 ~lPiilYn~P~-~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 138 GLPMVVYNIPA-LSGVKLTLDQINTLVT 164 (303)
T ss_dssp TCCEEEEECHH-HHCCCCCHHHHHHHHT
T ss_pred CCCEEEEeCcc-ccCCCCCHHHHHHHhc
No 404
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=39.85 E-value=1.7e+02 Score=26.23 Aligned_cols=80 Identities=11% Similarity=0.004 Sum_probs=41.2
Q ss_pred CEEEcCChHHHHHHHHHHhccC-CCCeEEEcCCcCcchHH---HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDGASPAVHMMMQLLIRS-ENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~-~gd~Vlv~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
.|++|.|+...-..+.+.|. . .|..|++..-.-..... .+...+.++..+..|-. |.+.+++.++.....
T Consensus 6 ~vlITGasggIG~~~a~~L~-~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLC-RLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID-----DLQSIRALRDFLRKE 79 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCC-----CHHHHHHHHHHHHHh
Confidence 46666555444455566666 5 67777765433222222 22233556666665532 677777777654222
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
..+..+||-+
T Consensus 80 ~g~id~li~~ 89 (276)
T 1wma_A 80 YGGLDVLVNN 89 (276)
T ss_dssp HSSEEEEEEC
T ss_pred cCCCCEEEEC
Confidence 2245555433
No 405
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=39.32 E-value=53 Score=28.97 Aligned_cols=39 Identities=15% Similarity=0.339 Sum_probs=29.4
Q ss_pred cCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 267 KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 267 ~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
.|-.+.+|+..-..|+.|.... +.++.+++++||+.+|.
T Consensus 156 AGl~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 156 AGLQPAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TTSCSBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred cCCCceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 3546666765555689999998 66777799999987774
No 406
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=39.26 E-value=42 Score=34.41 Aligned_cols=68 Identities=15% Similarity=0.249 Sum_probs=42.0
Q ss_pred HHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 231 SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 231 ~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
.+..++.+...+-+.++.+|.+..+..-+.-+. |... ......|-.+|++++++|++.|+++|+-||-
T Consensus 182 ~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~----ga~~------~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 182 RVARYKYNKLHLHLSDDQGWRIAIDSWPRLATY----GGST------EVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT----TTSC------CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCcEEEEEeccCCCceehhhhhHHHHhh----cCcc------ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 344456666666666666666654443332211 1110 1112236789999999999999999999886
No 407
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=39.10 E-value=40 Score=34.57 Aligned_cols=107 Identities=12% Similarity=0.259 Sum_probs=62.1
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhcc----CC-CC-----eEEEcCCcCc-------------c------hHHHHHHhCCe
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIR----SE-ND-----GILCPIPQYP-------------L------YSASIALHGGT 238 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~----~~-gd-----~Vlv~~p~~~-------------~------~~~~~~~~g~~ 238 (533)
++.+.|.++..+..++...++.|.+ .. |. ..+...|.|. + +.+.+..++.+
T Consensus 98 v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~KlN 177 (507)
T 2gjx_A 98 INDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLN 177 (507)
T ss_dssp ESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCC
T ss_pred EeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCCc
Confidence 5566788887666666655555531 11 21 1223335543 1 12344556667
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 239 ~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
+..+.+.++.+|.+..+...+.-+. | . ..|.|-.||++++++|++.|+++|+-||-
T Consensus 178 ~lh~HltDdq~wr~ei~~~P~Lt~~----G-a---------~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 178 VFHWHLVDDPSFPYESFTFPELMRK----G-S---------YNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp EEEEECCCSSCCCBCCSSCTHHHHH----H-S---------SCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEecccCeeeeccccchhhhc----c-c---------cCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 7666666666666543332222111 0 0 12445679999999999999999998886
No 408
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=39.03 E-value=1.3e+02 Score=28.30 Aligned_cols=90 Identities=8% Similarity=0.087 Sum_probs=47.5
Q ss_pred CEEEcCC---hHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDG---ASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G---~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
-|+++.| ..+++..+-.+- +-| |.|++..|.|... +.++.+.+.+..+.-.+.
T Consensus 79 pviaGvg~~~t~~ai~la~~A~--~~Gadavlv~~Pyy~~~---------------------~~~s~~~l~~~f~~va~a 135 (309)
T 3fkr_A 79 PVIVTTSHYSTQVCAARSLRAQ--QLGAAMVMAMPPYHGAT---------------------FRVPEAQIFEFYARVSDA 135 (309)
T ss_dssp CEEEECCCSSHHHHHHHHHHHH--HTTCSEEEECCSCBTTT---------------------BCCCHHHHHHHHHHHHHH
T ss_pred cEEEecCCchHHHHHHHHHHHH--HcCCCEEEEcCCCCccC---------------------CCCCHHHHHHHHHHHHHh
Confidence 3776654 456666555544 345 8999998987210 012233333333322111
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEcc
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-GLVLLADE 310 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~-~~~lI~De 310 (533)
. +...++.+.|. ||+.++.+.+.+| ++++ |+.=|=||
T Consensus 136 ~-~lPiilYn~P~--tg~~l~~~~~~~L---a~~~pnIvgiK~~ 173 (309)
T 3fkr_A 136 I-AIPIMVQDAPA--SGTALSAPFLARM---AREIEQVAYFXIE 173 (309)
T ss_dssp C-SSCEEEEECGG--GCCCCCHHHHHHH---HHHSTTEEEEEEC
T ss_pred c-CCCEEEEeCCC--CCCCCCHHHHHHH---HhhCCCEEEEECC
Confidence 1 34466777774 7888886555554 4443 55545433
No 409
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=38.66 E-value=1.4e+02 Score=26.85 Aligned_cols=100 Identities=12% Similarity=0.083 Sum_probs=51.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcch-H---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY-S---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~-~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-... . ......+.++..+..|-. |.+.+++.++...+
T Consensus 8 k~vlVTGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLL-AKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT-----KKEDLHKIVEEAMS 81 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHH
Confidence 345666555444455566666 5787777653221111 1 122223556777776633 67888877765433
Q ss_pred cCCCeeEEEEeCCC---CCCc--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG---NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~---NPtG--~~~s~~~l~~i~~ 297 (533)
...+...+| ++.. .+.+ ...+.+++++..+
T Consensus 82 ~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 82 HFGKIDFLI-NNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp HHSCCCEEE-CCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred HhCCCCEEE-ECCcccccCCCccccCCHHHHHHHHH
Confidence 222455554 4432 1111 2456666666544
No 410
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=38.57 E-value=1.5e+02 Score=26.34 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=51.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEc-CCcCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~-~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|..|++. ...-.... ..+...+.++..+..+-. |.+.+++.++....
T Consensus 8 k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 81 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLA-NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE-----SLHGVEALYSSLDN 81 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcC-----CHHHHHHHHHHHHH
Confidence 346666655555555666666 578777663 33222222 233445777777776643 56666666554311
Q ss_pred c------CCCeeEEEEeCC-CCCCcc--CCCHHHHHHHHH
Q 009517 267 K------GITVRALVVINP-GNPTGQ--VLAEENQRAIVD 297 (533)
Q Consensus 267 ~------g~~~~~iil~~p-~NPtG~--~~s~~~l~~i~~ 297 (533)
. ..+...++ ++. ..+.+. ..+.++++++.+
T Consensus 82 ~~~~~~~~~~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 120 (255)
T 3icc_A 82 ELQNRTGSTKFDILI-NNAGIGPGAFIEETTEQFFDRMVS 120 (255)
T ss_dssp HHHHHHSSSCEEEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhcccccCCcccEEE-ECCCCCCCCChhhCCHHHHHHHHh
Confidence 0 01255444 444 223332 346666666544
No 411
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=38.19 E-value=1.4e+02 Score=26.83 Aligned_cols=100 Identities=15% Similarity=0.113 Sum_probs=47.4
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHh---C-------CeEEEEecCCCCCCCCCHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH---G-------GTLVPYYLDEATGWGLETSEVKKQ 260 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~---g-------~~~~~v~~~~~~~~~ld~~~l~~~ 260 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-.-.......... | .++..+..|- -|.+.+++.
T Consensus 8 k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~ 81 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLA-GEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-----SEARAARCL 81 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT-----TSHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-----CCHHHHHHH
Confidence 456666555555555556666 56777776543322222222211 2 3344455442 267777777
Q ss_pred HHHHHhcCCCe-eEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 261 LEAAKAKGITV-RALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 261 i~~~~~~g~~~-~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
++.....-.+. ..|| ++.. .+.+ ...+.+++++..+
T Consensus 82 ~~~~~~~~g~i~d~vi-~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVV-SCAGITQDEFLLHMSEDDWDKVIA 121 (264)
T ss_dssp HHHHHHHHSSCCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEE-ECCCcCCCcchhhCCHHHHHHHHh
Confidence 76542211133 4444 4432 2222 2346666665544
No 412
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=38.14 E-value=2.2e+02 Score=25.41 Aligned_cols=27 Identities=19% Similarity=0.117 Sum_probs=14.0
Q ss_pred CccCCCHHHHHHHHHHHHHc-CCEEEEc
Q 009517 283 TGQVLAEENQRAIVDFCKKE-GLVLLAD 309 (533)
Q Consensus 283 tG~~~s~~~l~~i~~l~~~~-~~~lI~D 309 (533)
+|..+.++.+++|.++.+.. ++.+.+|
T Consensus 148 ~Gq~f~~~~l~ki~~lr~~~~~~~I~Vd 175 (228)
T 3ovp_A 148 GGQKFMEDMMPKVHWLRTQFPSLDIEVD 175 (228)
T ss_dssp CSCCCCGGGHHHHHHHHHHCTTCEEEEE
T ss_pred CCcccCHHHHHHHHHHHHhcCCCCEEEe
Confidence 45555555555555554443 3455555
No 413
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=37.89 E-value=66 Score=29.90 Aligned_cols=101 Identities=12% Similarity=0.123 Sum_probs=51.7
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCC---eEEEcCCcCcchHHHHHH-----hCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSEND---GILCPIPQYPLYSASIAL-----HGGTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd---~Vlv~~p~~~~~~~~~~~-----~g~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
..+++|.|+...-..+.+.|. ..|. .|++..-.-......... .|.++..+..|-. |.+.+++.++
T Consensus 34 k~~lVTGas~GIG~aia~~l~-~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~ 107 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYL-EASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIE 107 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHH
T ss_pred CEEEEecCCChHHHHHHHHHH-HcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHH
Confidence 345665555444444455554 3454 676655433323322222 1677888877643 5677777776
Q ss_pred HHHhcCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~~l 298 (533)
...+.-.+...+| ++.. .+.+ ...+.++|+++.++
T Consensus 108 ~~~~~~g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 108 NLPQEFKDIDILV-NNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp TSCGGGCSCCEEE-ECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHHhcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 5322222455444 5442 2122 24577777776553
No 414
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=37.81 E-value=1.3e+02 Score=27.30 Aligned_cols=81 Identities=15% Similarity=0.025 Sum_probs=40.4
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCC-cCcchHHHHHH---h-CCeEEEEecCCCCCCCCCH----HHHHHHHH
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYSASIAL---H-GGTLVPYYLDEATGWGLET----SEVKKQLE 262 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-~~~~~~~~~~~---~-g~~~~~v~~~~~~~~~ld~----~~l~~~i~ 262 (533)
.+++|.|+...-..+.+.|. ..|..|++..- .-......... . |.++..+..|-. |. +.+++.++
T Consensus 13 ~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLH-QQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS-----LSSSLLDCCEDIID 86 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----SSTTHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCC-----CccccHHHHHHHHH
Confidence 45666555444455555665 57877776543 21222222222 2 666777766543 44 66666665
Q ss_pred HHHhcCCCeeEEEEeCC
Q 009517 263 AAKAKGITVRALVVINP 279 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p 279 (533)
.......+...+| ++.
T Consensus 87 ~~~~~~g~id~lv-~nA 102 (276)
T 1mxh_A 87 CSFRAFGRCDVLV-NNA 102 (276)
T ss_dssp HHHHHHSCCCEEE-ECC
T ss_pred HHHHhcCCCCEEE-ECC
Confidence 4322112445444 444
No 415
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=37.73 E-value=1e+02 Score=29.28 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=54.1
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-Cc--CcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQ--YPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~--~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
..|++|.++-.....+++.|. ..|..|.+.. .. ...-. ..+...+.+++..++. |.+.+.++++..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~-------d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASL-DAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN-------EQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHH-HTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT-------CHHHHHHHHHHT
T ss_pred CeEEEECCCcHHHHHHHHHHH-HCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC-------CHHHHHHHHhhC
Confidence 468877664444455556665 4565554433 22 11111 1223456666555433 689999999853
Q ss_pred HhcCCCeeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcC-CEEE
Q 009517 265 KAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEG-LVLL 307 (533)
Q Consensus 265 ~~~g~~~~~iil~~p-~NPtG~~~s~~~l~~i~~l~~~~~-~~lI 307 (533)
++.+||.+.. .|..| -..|++.|++.+ +-.+
T Consensus 83 -----~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 83 -----EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRF 115 (346)
T ss_dssp -----TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEE
T ss_pred -----CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEE
Confidence 4556665533 34333 468888999888 5333
No 416
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=37.67 E-value=2.2e+02 Score=25.73 Aligned_cols=97 Identities=14% Similarity=0.082 Sum_probs=49.3
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. ..|.+|++..-. ....-......+..+..|- -|.+.+++.++.......+
T Consensus 17 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFS-EEGHPLLLLARR---VERLKALNLPNTLCAQVDV-----TDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCCEEEEESC---HHHHHTTCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECC---HHHHHHhhcCCceEEEecC-----CCHHHHHHHHHHHHHHCCC
Confidence 345666555544455555665 567667665432 1222122223455555543 2677777777654322224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+| ++.. .+.+ ...+.++|+++.+
T Consensus 88 iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 116 (266)
T 3p19_A 88 ADAIV-NNAGMMLLGQIDTQEANEWQRMFD 116 (266)
T ss_dssp EEEEE-ECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 55554 4442 2222 2456677776654
No 417
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=37.09 E-value=65 Score=30.31 Aligned_cols=76 Identities=17% Similarity=0.347 Sum_probs=45.7
Q ss_pred CCcCcchHHHHHHhC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 222 ~p~~~~~~~~~~~~g-~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
.|.|.....+....+ ..+.-+-+.+ ..-++.++++++. .++.+++.+. | ++.++.++|.+.|+
T Consensus 56 ~~vy~sl~el~~~~~~~DvaIi~vp~----~~~~~~v~ea~~~------Gi~~vVi~t~----G--~~~~~~~~l~~~A~ 119 (297)
T 2yv2_A 56 VPVYDSVKEALAEHPEINTSIVFVPA----PFAPDAVYEAVDA------GIRLVVVITE----G--IPVHDTMRFVNYAR 119 (297)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCG----GGHHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHH
T ss_pred EeeeCCHHHHhhcCCCCCEEEEecCH----HHHHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHH
Confidence 355666666555323 4433332221 2235666776665 5776654332 3 35677899999999
Q ss_pred HcCCEEEEccccc
Q 009517 301 KEGLVLLADEVYQ 313 (533)
Q Consensus 301 ~~~~~lI~De~y~ 313 (533)
++++.++-..+..
T Consensus 120 ~~gi~viGPNc~G 132 (297)
T 2yv2_A 120 QKGATIIGPNCPG 132 (297)
T ss_dssp HHTCEEECSSSCE
T ss_pred HcCCEEEcCCCCe
Confidence 9999888777543
No 418
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=36.90 E-value=1e+02 Score=29.46 Aligned_cols=88 Identities=15% Similarity=0.133 Sum_probs=49.8
Q ss_pred EEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 193 IFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 193 i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
|+++.|+ .+++..+-.+-- ..-|-|++..|.|... +.+.+.+..+.-.+..
T Consensus 106 ViaGvg~~st~eai~la~~A~~-~Gadavlv~~P~Y~~~------------------------s~~~l~~~f~~VA~a~- 159 (332)
T 2r8w_A 106 LMAGIGALRTDEAVALAKDAEA-AGADALLLAPVSYTPL------------------------TQEEAYHHFAAVAGAT- 159 (332)
T ss_dssp EEEEECCSSHHHHHHHHHHHHH-HTCSEEEECCCCSSCC------------------------CHHHHHHHHHHHHHHC-
T ss_pred EEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHhc-
Confidence 6666554 666666555442 2338999999988531 2233333333221111
Q ss_pred CeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 270 TVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 270 ~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+...++.+.|.. ||+.++.+.+.+|++ -.++.=|=|.
T Consensus 160 ~lPiilYn~P~~-tg~~l~~e~~~~La~---~pnIvgiKds 196 (332)
T 2r8w_A 160 ALPLAIYNNPTT-TRFTFSDELLVRLAY---IPNIRAIKMP 196 (332)
T ss_dssp SSCEEEECCHHH-HCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred CCCEEEEeCccc-cCcCCCHHHHHHHHc---CCCEEEEEeC
Confidence 345666677764 899999887777653 2344445443
No 419
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=36.72 E-value=1e+02 Score=28.76 Aligned_cols=93 Identities=12% Similarity=0.101 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCCh---HHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecC
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGA---SPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~~t~G~---~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~ 245 (533)
.+=|.++.+...+. ... |+++.|+ .+++..+-.+- +.| |.|++..|.|...
T Consensus 51 ~eEr~~v~~~~~~~-----~~g-ViaGvg~~~t~~ai~la~~A~--~~Gadavlv~~P~y~~~----------------- 105 (288)
T 2nuw_A 51 KDEKRQNLNALYDV-----THK-LIFQVGSLNLNDVMELVKFSN--EMDILGVSSHSPYYFPR----------------- 105 (288)
T ss_dssp HHHHHHHHHHHTTT-----CSC-EEEECCCSCHHHHHHHHHHHH--TSCCSEEEECCCCSSCS-----------------
T ss_pred HHHHHHHHHHHHHH-----hCC-eEEeeCCCCHHHHHHHHHHHH--hcCCCEEEEcCCcCCCC-----------------
Confidence 34455566665432 122 8887765 56666555544 345 9999999988530
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHH
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i 295 (533)
++.+.+.+..+.-.+.. +...++.+.|.. ||+.++.+.+.+|
T Consensus 106 ------~s~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~L 147 (288)
T 2nuw_A 106 ------LPEKFLAKYYEEIARIS-SHSLYIYNYPAA-TGYDIPPSILKSL 147 (288)
T ss_dssp ------CCHHHHHHHHHHHHHHC-CSCEEEEECHHH-HSCCCCHHHHTTT
T ss_pred ------CCHHHHHHHHHHHHHhc-CCCEEEEECchH-hCcCCCHHHHhcc
Confidence 12333433333221111 345677777754 8999998887776
No 420
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=36.27 E-value=1.9e+02 Score=26.34 Aligned_cols=81 Identities=10% Similarity=-0.040 Sum_probs=40.3
Q ss_pred CCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcC-cchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~-~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.|+ ...-..+.+.+. ..|.+|++..-.- ......+...+.++..+..|-. |.+.+++.++...+.
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMH-REGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVI-----SDQEIKDLFVELGKV 100 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHH-HTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHH-HcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecC-----CHHHHHHHHHHHHHH
Confidence 345555543 223344455555 5677777654332 1112222222334555665532 678888877765433
Q ss_pred CCCeeEEEEe
Q 009517 268 GITVRALVVI 277 (533)
Q Consensus 268 g~~~~~iil~ 277 (533)
..+...+|-+
T Consensus 101 ~g~id~li~n 110 (280)
T 3nrc_A 101 WDGLDAIVHS 110 (280)
T ss_dssp CSSCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 3355555533
No 421
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=36.14 E-value=2.5e+02 Score=25.44 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=49.5
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-........... .+..+..|- -|.+.+++.++...+.-.
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFV-NSGARVVICDKDESGGRALEQELP-GAVFILCDV-----TQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 3456666665555555666666 578777765432222222222222 244555543 267777777765422212
Q ss_pred CeeEEEEeCCC--CCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPG--NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~--NPtG--~~~s~~~l~~i~~ 297 (533)
+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 82 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 82 RLDCVV-NNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 455554 4442 1222 2346666666544
No 422
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=35.99 E-value=1.5e+02 Score=26.92 Aligned_cols=100 Identities=7% Similarity=-0.063 Sum_probs=48.9
Q ss_pred CCEEEcCC--hHHHHHHHHHHhccCCCCeEEEcCCcCcc-hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 191 NDIFLTDG--ASPAVHMMMQLLIRSENDGILCPIPQYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 191 ~~i~~t~G--~~~al~~~~~~l~~~~gd~Vlv~~p~~~~-~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
..+++|.| +...-..+.+.|. ..|-+|++..-.-.. ........+.++..+..|- -|.+.+++.++...+.
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQ-EQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDV-----QNEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHH-HCCCEEEEEecChHHHHHHHHHhcCCCceEEEccC-----CCHHHHHHHHHHHHHH
Confidence 34566654 3333344555555 567777765433222 1223333444555555553 2677777777654322
Q ss_pred CC---CeeEEEEeCCCC-C-----Cc--cCCCHHHHHHHHH
Q 009517 268 GI---TVRALVVINPGN-P-----TG--QVLAEENQRAIVD 297 (533)
Q Consensus 268 g~---~~~~iil~~p~N-P-----tG--~~~s~~~l~~i~~ 297 (533)
-. +...+ +++... + .+ ...+.++|++..+
T Consensus 82 ~g~~~~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (269)
T 2h7i_A 82 IGAGNKLDGV-VHSIGFMPQTGMGINPFFDAPYADVSKGIH 121 (269)
T ss_dssp HCTTCCEEEE-EECCCCCCGGGSTTSCGGGCCHHHHHHHHH
T ss_pred hCCCCCceEE-EECCccCccccccccccccCCHHHHHHHHH
Confidence 11 34444 454421 1 11 2356666766554
No 423
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.92 E-value=2.2e+02 Score=24.94 Aligned_cols=100 Identities=8% Similarity=-0.027 Sum_probs=49.2
Q ss_pred CEEEcCChHHHHHHHHHHhccCCC--CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
.|++|.|+...-..+.+.|. ..| ..|++..-.-..........+.++..+..|-. |.+.+++.++.....-.
T Consensus 5 ~vlItGasggiG~~la~~l~-~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLV-KDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT-----CDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHH-TCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTT-----CHHHHHHHHHHHHHHHG
T ss_pred EEEEecCCchHHHHHHHHHH-hcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecC-----CHHHHHHHHHHHHHhcC
Confidence 46666555544455666666 567 67776543322222221112455666666532 67777777665322111
Q ss_pred --CeeEEEEeCCCCC-Cc--cCCCHHHHHHHHH
Q 009517 270 --TVRALVVINPGNP-TG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 --~~~~iil~~p~NP-tG--~~~s~~~l~~i~~ 297 (533)
+...||.+.-..+ .+ ...+.+++++..+
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 3455553322221 22 2345666665544
No 424
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=35.83 E-value=48 Score=31.20 Aligned_cols=74 Identities=11% Similarity=0.248 Sum_probs=43.1
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|.|.....+.......+.-+-+.+ ..-++.++++++. .++.+++.+ +|. +.++.++|.+.|+++
T Consensus 57 ~vy~sl~el~~~~~~Dv~ii~vp~----~~~~~~v~ea~~~------Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~ 120 (294)
T 2yv1_A 57 PVFDTVKEAVKETDANASVIFVPA----PFAKDAVFEAIDA------GIELIVVIT----EHI--PVHDTMEFVNYAEDV 120 (294)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCH----HHHHHHHHHHHHT------TCSEEEECC----SCC--CHHHHHHHHHHHHHH
T ss_pred eeeCCHHHHhhcCCCCEEEEccCH----HHHHHHHHHHHHC------CCCEEEEEC----CCC--CHHHHHHHHHHHHHc
Confidence 455666666553344443332211 1124455555544 566555433 233 567789999999999
Q ss_pred CCEEEEcccc
Q 009517 303 GLVLLADEVY 312 (533)
Q Consensus 303 ~~~lI~De~y 312 (533)
++.++-..+.
T Consensus 121 gi~viGPNc~ 130 (294)
T 2yv1_A 121 GVKIIGPNTP 130 (294)
T ss_dssp TCEEECSSCC
T ss_pred CCEEEcCCCc
Confidence 9998877754
No 425
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=35.74 E-value=1.1e+02 Score=27.63 Aligned_cols=95 Identities=7% Similarity=-0.023 Sum_probs=49.9
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...+++|.|+...-..+.+.|. ..|.+|++..-.-.. ....++..+..|- -|.+.+++.++...+.-.
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~------~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYR-DRNYRVVATSRSIKP------SADPDIHTVAGDI-----SKPETADRIVREGIERFG 95 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCCC------CSSTTEEEEESCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChhh------cccCceEEEEccC-----CCHHHHHHHHHHHHHHCC
Confidence 3456666555554555566666 578777765533221 1122455566553 267787777765432222
Q ss_pred CeeEEEEeCC-CCCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p-~NPtG--~~~s~~~l~~i~~ 297 (533)
+...++ ++. ..+.+ ...+.++++++.+
T Consensus 96 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 96 RIDSLV-NNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 455554 443 22222 2457777777655
No 426
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=35.03 E-value=1.2e+02 Score=31.30 Aligned_cols=79 Identities=11% Similarity=0.008 Sum_probs=52.2
Q ss_pred CCCCeEEEcCCcCcchH-------HHHHHhCCeEEEEecCC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCc
Q 009517 213 SENDGILCPIPQYPLYS-------ASIALHGGTLVPYYLDE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (533)
Q Consensus 213 ~~gd~Vlv~~p~~~~~~-------~~~~~~g~~~~~v~~~~-~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG 284 (533)
++++.|++....+++.. +.+...|++++...... .-.-.-|.++|...++.. +++-|+..|-.
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~-----~Pk~vipvHGe---- 407 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLT-----TPRFFLPWHGE---- 407 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHH-----CCSEEEEESBC----
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhc-----CCCEEEEEcCC----
Confidence 57899999998887752 33445688876532100 001134889999999886 67888877743
Q ss_pred cCCCHHHHHHHHHHHHHcCC
Q 009517 285 QVLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 285 ~~~s~~~l~~i~~l~~~~~~ 304 (533)
...+.++++++++.|+
T Consensus 408 ----~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 408 ----VRHQMNFKWLAESMSR 423 (562)
T ss_dssp ----HHHHHHHHHHHHTSSS
T ss_pred ----HHHHHHHHHHHHHcCC
Confidence 2347777888887664
No 427
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=34.99 E-value=61 Score=27.01 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCH-HHHHHHH-HHHHHcCC-EEEEcccccc
Q 009517 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE-ENQRAIV-DFCKKEGL-VLLADEVYQE 314 (533)
Q Consensus 250 ~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~-~~l~~i~-~l~~~~~~-~lI~De~y~~ 314 (533)
...+.+.|.+.++++ ++..|++-.|-|..|..-.. .+.+..+ .++++.++ +.++||.|+-
T Consensus 40 ~~~~~~~l~~li~~~-----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY-----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHc-----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 355789999999886 78899999996665654221 2234555 34444566 5667998864
No 428
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=34.89 E-value=62 Score=24.78 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH-HHHHHHHHHHHcCC-EEEEccccc
Q 009517 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGL-VLLADEVYQ 313 (533)
Q Consensus 251 ~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~-~l~~i~~l~~~~~~-~lI~De~y~ 313 (533)
..+.+.|.+.++++ ++..|++--|-|..|..-+.. ..++.++..++.++ +.++||-++
T Consensus 37 ~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 37 EEDVEALLDFVRRE-----GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHH-----TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 45788999999987 788899899977766543321 23444433333354 556788665
No 429
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=34.79 E-value=1.7e+02 Score=27.47 Aligned_cols=88 Identities=14% Similarity=0.142 Sum_probs=48.6
Q ss_pred EEEcC---ChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 193 IFLTD---GASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 193 i~~t~---G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
|+++. +..+++..+-.+-- ..-|.|++..|.|... +.+.+.+..+.-.+..
T Consensus 76 viaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~~~------------------------~~~~l~~~f~~va~a~- 129 (300)
T 3eb2_A 76 VVAGVASTSVADAVAQAKLYEK-LGADGILAILEAYFPL------------------------KDAQIESYFRAIADAV- 129 (300)
T ss_dssp BEEEEEESSHHHHHHHHHHHHH-HTCSEEEEEECCSSCC------------------------CHHHHHHHHHHHHHHC-
T ss_pred EEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEcCCCCCCC------------------------CHHHHHHHHHHHHHHC-
Confidence 55544 45666666655543 2338999999988531 2233333332221111
Q ss_pred CeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 270 TVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 270 ~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+...++.+.|. .||+.++.+.+.+|+ +--++.=|=|.
T Consensus 130 ~lPiilYn~P~-~tg~~l~~~~~~~La---~~pnIvgiKds 166 (300)
T 3eb2_A 130 EIPVVIYTNPQ-FQRSDLTLDVIARLA---EHPRIRYIKDA 166 (300)
T ss_dssp SSCEEEEECTT-TCSSCCCHHHHHHHH---TSTTEEEEEEC
T ss_pred CCCEEEEECcc-ccCCCCCHHHHHHHH---cCCCEEEEEcC
Confidence 35567777776 378888877666653 22345545543
No 430
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=34.40 E-value=2.8e+02 Score=25.52 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=54.8
Q ss_pred hcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC--CeEEEcCCcCcchHHHHHHhC--CeEEEEecCCCCCCCCCHHHHH
Q 009517 183 RDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVK 258 (533)
Q Consensus 183 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~p~~~~~~~~~~~~g--~~~~~v~~~~~~~~~ld~~~l~ 258 (533)
.+| +++++|+++.-++.+...+..++. .+. ..|+........-........ ..+..+-=..+ --+.++..+
T Consensus 151 ~~~--id~~ri~l~GfS~Gg~~a~~~a~~-~p~~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~~D--~~Vp~~~~~ 225 (285)
T 4fhz_A 151 EEG--LPPEALALVGFSQGTMMALHVAPR-RAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGDAD--PVVPFADMS 225 (285)
T ss_dssp HHT--CCGGGEEEEEETHHHHHHHHHHHH-SSSCCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEETTC--SSSCTHHHH
T ss_pred HhC--CCccceEEEEeCHHHHHHHHHHHh-CcccCceEEEeecCccCchhhhhhhhhcCcccceeeCCC--CCcCHHHHH
Confidence 345 678898886545444444333333 343 345555544433333333322 22322222222 234455544
Q ss_pred HHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 259 ~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
+..+..++.|.++...++.. .|--++.++++.+.++.+++
T Consensus 226 ~~~~~L~~~g~~~~~~~y~g----~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 226 LAGEALAEAGFTTYGHVMKG----TGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp HHHHHHHHTTCCEEEEEETT----CCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEECC----CCCCCCHHHHHHHHHHHHHH
Confidence 44433333454544443322 22336788999999999875
No 431
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=33.69 E-value=2.1e+02 Score=25.45 Aligned_cols=19 Identities=21% Similarity=0.403 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHc--CCEEEEc
Q 009517 291 NQRAIVDFCKKE--GLVLLAD 309 (533)
Q Consensus 291 ~l~~i~~l~~~~--~~~lI~D 309 (533)
.++++.++..++ ++.+.+|
T Consensus 159 ~i~~lr~~~~~~~~~~~I~v~ 179 (230)
T 1tqj_A 159 KIRALRQMCDERGLDPWIEVD 179 (230)
T ss_dssp HHHHHHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHHHhcCCCCcEEEE
Confidence 344444444332 4566665
No 432
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=33.46 E-value=2.6e+02 Score=25.40 Aligned_cols=101 Identities=8% Similarity=-0.053 Sum_probs=49.6
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHH---HHHhCC-eEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG-TLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~---~~~~g~-~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.+. ..|.+|++..-.-...... +...|. ++..+..|-. |.+.+++.++....
T Consensus 29 k~vlITGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLA-KMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTME-----DMTFAEQFVAQAGK 102 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCC-----CHHHHHHHHHHHHH
Confidence 346666555444455555565 5687777654332222222 222343 6666766532 67777777665322
Q ss_pred cCCCeeEEEEeCCCC-CCc-cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPGN-PTG-QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~N-PtG-~~~s~~~l~~i~~ 297 (533)
...+...+|.+.... +.+ ...+.+++++..+
T Consensus 103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~ 135 (286)
T 1xu9_A 103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSME 135 (286)
T ss_dssp HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHH
T ss_pred HcCCCCEEEECCccCCCCccccCCHHHHHHHHH
Confidence 212455555432222 111 1235566655544
No 433
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=33.37 E-value=1e+02 Score=28.32 Aligned_cols=100 Identities=18% Similarity=0.015 Sum_probs=48.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCC-cCcchH---HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p-~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
..+++|.|+...-..+.+.|. ..|.+|++..- .-.... ..+...|.++..+..|-. |.+.+++.++....
T Consensus 30 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALA-ASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLA-----DLSSHQATVDAVVA 103 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTT-----SGGGHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 345666555554555566666 57877776542 211122 223345777777777643 45555555544322
Q ss_pred cCCCeeEEEEeCCC--CCCc--cCCCHHHHHHHH
Q 009517 267 KGITVRALVVINPG--NPTG--QVLAEENQRAIV 296 (533)
Q Consensus 267 ~g~~~~~iil~~p~--NPtG--~~~s~~~l~~i~ 296 (533)
...+...+|-+--. .+.+ ...+.++|+++.
T Consensus 104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 137 (280)
T 4da9_A 104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIV 137 (280)
T ss_dssp HHSCCCEEEEECC------CCGGGCCHHHHHHHT
T ss_pred HcCCCCEEEECCCccccCCCChhhCCHHHHHHHH
Confidence 22245555544221 1111 134666666543
No 434
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=33.03 E-value=91 Score=29.14 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCC
Q 009517 173 RDTIAAGIEARDGFPADPNDIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (533)
Q Consensus 173 r~aia~~~~~~~g~~~~~~~i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~ 249 (533)
|.++.+...+.-+-.+. |+++.|+ .+++..+-.+-- ..-|-|++..|.|.
T Consensus 56 r~~v~~~~~~~~~gr~p---vi~Gvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~----------------------- 108 (291)
T 3a5f_A 56 RKETIKFVIDKVNKRIP---VIAGTGSNNTAASIAMSKWAES-IGVDGLLVITPYYN----------------------- 108 (291)
T ss_dssp HHHHHHHHHHHHTTSSC---EEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSS-----------------------
T ss_pred HHHHHHHHHHHhCCCCc---EEEeCCcccHHHHHHHHHHHHh-cCCCEEEEcCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 250 ~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
.++.+.+.+..+.-.+.. +...++.+.|.. ||+.++.+.+.+|++
T Consensus 109 -~~s~~~l~~~f~~ia~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 109 -KTTQKGLVKHFKAVSDAV-STPIIIYNVPGR-TGLNITPGTLKELCE 153 (291)
T ss_dssp -CCCHHHHHHHC-CTGGGC-CSCEEEEECHHH-HSCCCCHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCCCCCHHHHHHHHc
No 435
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=32.76 E-value=1.3e+02 Score=27.92 Aligned_cols=50 Identities=10% Similarity=0.147 Sum_probs=38.4
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+|-+|...+.++... ...+|+|... .++.++++++.+.|++.|+-+++|-
T Consensus 127 dfi~d~~qi~ea~~~------GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSW------GADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHT------TCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHc------CCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 567788888776554 5667776653 4677899999999999999888863
No 436
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=31.92 E-value=2e+02 Score=26.14 Aligned_cols=94 Identities=19% Similarity=0.163 Sum_probs=45.7
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
...|++|.|+...-..+.+.|. ..|.+|++..-.-... .+ ....+..|- -|.+.+++.++...+...
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~------~~-~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALV-RYGAKVVSVSLDEKSD------VN-VSDHFKIDV-----TNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCC--C------TT-SSEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCchhc------cC-ceeEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 3455666555444445555665 5787777654221111 11 223344442 267777777765432222
Q ss_pred CeeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 270 TVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
+...+| ++.. .+.+ ...+.++|+++.+
T Consensus 81 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 81 RIDILV-NNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp CCCEEE-ECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 455554 4442 2212 2456676765544
No 437
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=31.70 E-value=59 Score=33.78 Aligned_cols=64 Identities=14% Similarity=0.225 Sum_probs=40.9
Q ss_pred HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 230 ~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
+.+..++.++..+.+.++.+|.+..+..-+.-+. | . ...|-.||++++++|++.|+++||-||-
T Consensus 211 d~mA~~KlN~lH~HltDdqgwrlei~~~P~Lt~~----G--a---------~~~~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 211 EAMAAVKLNTFHWHITDSQSFPFVTTKRPNLYKF----G--A---------LSPQKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp HHHHHTTCCEEEEECCCSSCCCBCCSSSHHHHHH----H--S---------SSSSSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCceEEEEeecCcCceeccccCcchhcc----C--C---------cCCCCCcCHHHHHHHHHHHHHhCCceee
Confidence 3445566666666666666666544333322211 0 0 0135689999999999999999998875
No 438
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=31.67 E-value=68 Score=32.07 Aligned_cols=28 Identities=21% Similarity=0.385 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
+.++++++++.|+++|+-||+|-++...
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~ 109 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHT 109 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 5789999999999999999999988653
No 439
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=31.59 E-value=30 Score=34.93 Aligned_cols=28 Identities=25% Similarity=0.456 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
++++++++++-|+++|+-||.|-|+...
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 6789999999999999999999998774
No 440
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=31.49 E-value=1.3e+02 Score=27.31 Aligned_cols=54 Identities=28% Similarity=0.308 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc--CCCHHHHHHHHHHHHHcCCEEEEcc
Q 009517 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ--VLAEENQRAIVDFCKKEGLVLLADE 310 (533)
Q Consensus 251 ~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~--~~s~~~l~~i~~l~~~~~~~lI~De 310 (533)
+.+.+++++.++...+.-+....| ||-+|. +-+++-++.+.+.++++|++ ++|.
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a~Gv-----nNHmGS~~T~~~~~m~~vm~~l~~~gL~-fvDS 134 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYAVGL-----NNHMGSKIVENEKIMRAILEVVKEKNAF-IIDS 134 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTCCEE-----EEEECTTGGGCHHHHHHHHHHHHHTTCE-EEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEE-----ecccccchhcCHHHHHHHHHHHHHCCCE-EEcC
Confidence 457888888888765554444333 233454 44566699999999999955 4564
No 441
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=30.91 E-value=35 Score=37.32 Aligned_cols=119 Identities=13% Similarity=0.248 Sum_probs=64.8
Q ss_pred CCCCCCCCEEEcCChHHHHHHHHHHhcc--CC-CC-e----EEEcCCcCc-------------c------hHHHHHHhCC
Q 009517 185 GFPADPNDIFLTDGASPAVHMMMQLLIR--SE-ND-G----ILCPIPQYP-------------L------YSASIALHGG 237 (533)
Q Consensus 185 g~~~~~~~i~~t~G~~~al~~~~~~l~~--~~-gd-~----Vlv~~p~~~-------------~------~~~~~~~~g~ 237 (533)
.+.++.+.|.|+..+..++...++.|.+ .. +. . .+...|.|. + +.+.+..++.
T Consensus 263 ~L~v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~Kl 342 (858)
T 1c7s_A 263 ELKIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKL 342 (858)
T ss_dssp EEEECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCC
Confidence 3445667888887666666655555431 12 22 1 233345554 1 2334455666
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEE-E----EeCC---CC--CCccCCCHHHHHHHHHHHHHcCCEEE
Q 009517 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRAL-V----VINP---GN--PTGQVLAEENQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 238 ~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~i-i----l~~p---~N--PtG~~~s~~~l~~i~~l~~~~~~~lI 307 (533)
+...+.+.++.+|.+..+.+-+.-+. | .-+.- . ...| ++ +.|-.||.+++++|++.|++++|-||
T Consensus 343 N~lh~HltDdqgwriei~~yP~Lt~~----G-a~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VI 417 (858)
T 1c7s_A 343 NKFHFHLSDDEGWRIEIPGLPELTEV----G-GQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVI 417 (858)
T ss_dssp CEEEEECEETTEECBCCTTCTHHHHT----T-TEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEE
T ss_pred cEEEEEeccCccccccccCCchhhhc----c-ccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 66666666555666554443332211 0 00000 0 0011 11 34568999999999999999999887
Q ss_pred E
Q 009517 308 A 308 (533)
Q Consensus 308 ~ 308 (533)
-
T Consensus 418 P 418 (858)
T 1c7s_A 418 P 418 (858)
T ss_dssp E
T ss_pred E
Confidence 5
No 442
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=30.87 E-value=1.5e+02 Score=26.78 Aligned_cols=102 Identities=8% Similarity=0.005 Sum_probs=48.3
Q ss_pred CCCCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCcc---hHHHHHHhCC-eEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 189 DPNDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPL---YSASIALHGG-TLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 189 ~~~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~~---~~~~~~~~g~-~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
....+++|.|+ +..-..+.+.|. ..|.+|++..-.-.. ........+. ++..+..|-. |.+.+++.++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLH-EAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-----NDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-----SSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-----CHHHHHHHHH
Confidence 33456666655 334445555555 568777765433211 1222233333 5556665532 5566666665
Q ss_pred HHHhcCCCeeEEEEeCCCC-C----Cc--cCCCHHHHHHHHH
Q 009517 263 AAKAKGITVRALVVINPGN-P----TG--QVLAEENQRAIVD 297 (533)
Q Consensus 263 ~~~~~g~~~~~iil~~p~N-P----tG--~~~s~~~l~~i~~ 297 (533)
...+...+...++ ++... + .+ ...+.+++++..+
T Consensus 80 ~~~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 120 (266)
T 3oig_A 80 SIKEQVGVIHGIA-HCIAFANKEELVGEYLNTNRDGFLLAHN 120 (266)
T ss_dssp HHHHHHSCCCEEE-ECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HHHHHhCCeeEEE-EccccccccccccchhhccHHHHHHHHH
Confidence 5422222444444 44422 1 11 2355566655443
No 443
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=30.54 E-value=1.4e+02 Score=30.96 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=59.5
Q ss_pred EEEcCChHHHHHHHHHHhcc--------CCCCeEEEcCCcCcchH-------HHHHHhCCeEEE-----EecCCCCCCCC
Q 009517 193 IFLTDGASPAVHMMMQLLIR--------SENDGILCPIPQYPLYS-------ASIALHGGTLVP-----YYLDEATGWGL 252 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~--------~~gd~Vlv~~p~~~~~~-------~~~~~~g~~~~~-----v~~~~~~~~~l 252 (533)
|++++|++.-...++..+.. .+||.|++.....++.. +.+...|++++. +.++. .-
T Consensus 294 vii~tgsqGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~Sg----Ha 369 (555)
T 3zq4_A 294 TILCTGSQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSG----HG 369 (555)
T ss_dssp EEEECCTTCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCS----SC
T ss_pred EEEeCCCCchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeC----CC
Confidence 55777764333333333321 36899999998777644 234557888764 22221 34
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~ 304 (533)
+-++|...++.. +++-++..|-- ...+.+.++++++.|+
T Consensus 370 ~~~eL~~~~~~~-----~Pk~~ipvHGe--------~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 370 GQEEQKLMLRLI-----KPKFFMPIHGE--------YRMQKMHVKLATDCGI 408 (555)
T ss_dssp CHHHHHHHHHHS-----CEEEEEEESBC--------HHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHh-----CCCEEEEcCCC--------HHHHHHHHHHHHHcCC
Confidence 789999998875 68877765533 2347777888887664
No 444
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=30.38 E-value=2e+02 Score=22.72 Aligned_cols=80 Identities=10% Similarity=0.038 Sum_probs=52.0
Q ss_pred CCCeEEEcCCcCcchHHHHHHhCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHH
Q 009517 214 ENDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (533)
Q Consensus 214 ~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~ 290 (533)
.+..|+...|.+..+...+..+|. +++.+..... .-.+..+|++++. | ...+|+...+ .++..
T Consensus 32 ~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~---~d~lwa~EqaLrs----g-~~~aVl~wl~------~l~~~ 97 (119)
T 1ofu_X 32 DARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRL----G-RSHTVVSWLE------PLSRA 97 (119)
T ss_dssp SSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSH---HHHHHHHHHHHHH----T-CEEEEEECCS------SCCHH
T ss_pred cCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCc---HHHHHHHHHHHhc----C-CccEEEECCC------cCChH
Confidence 455677778888889999999986 4555554321 1124566777776 2 4555554333 26778
Q ss_pred HHHHHHHHHHHcCCEEE
Q 009517 291 NQRAIVDFCKKEGLVLL 307 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI 307 (533)
+.+++.-.|++-+.+.+
T Consensus 98 ~~RRLqlAA~~g~~~~~ 114 (119)
T 1ofu_X 98 ARKQLSRAAQLGQAQSL 114 (119)
T ss_dssp HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhCCCeEE
Confidence 88888888877665543
No 445
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=30.31 E-value=2.6e+02 Score=25.76 Aligned_cols=118 Identities=12% Similarity=0.099 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccC-CCCeEEEcC--CcCcchHHHHHH--hCCeEEEEec
Q 009517 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDGILCPI--PQYPLYSASIAL--HGGTLVPYYL 244 (533)
Q Consensus 170 ~~lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-~gd~Vlv~~--p~~~~~~~~~~~--~g~~~~~v~~ 244 (533)
.+.++.|+++-... +....+++|.+.+.....+++.+..+ ..-+|++.+ |.+.+...+..+ .|.++..+.-
T Consensus 93 ~~~~~~Ia~~a~~~----I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~d 168 (276)
T 1vb5_A 93 EEAKRELASIGAQL----IDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITD 168 (276)
T ss_dssp HHHHHHHHHHHHHH----CCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG
T ss_pred HHHHHHHHHHHHHH----ccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcH
Confidence 45566666665554 44556777655444444455555311 234577744 766664433333 6888877762
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 245 ~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
. .+-..+ . ++..+++- +--...|-+..+-.--.++.+|+++++.+++
T Consensus 169 s----------a~~~~m-~------~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 169 A----------QMGLFC-R------EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp G----------GHHHHH-T------TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred H----------HHHHHH-c------cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 2 111122 1 45556555 3323344444444456777788888876655
No 446
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=30.23 E-value=2.8e+02 Score=25.80 Aligned_cols=55 Identities=22% Similarity=0.288 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHhcCC--CeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---C------CEEEEccccc
Q 009517 252 LETSEVKKQLEAAKAKGI--TVRALVVINPGNPTGQVLAEENQRAIVDFCKKE---G------LVLLADEVYQ 313 (533)
Q Consensus 252 ld~~~l~~~i~~~~~~g~--~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~---~------~~lI~De~y~ 313 (533)
+..+.++..++.....+. +..+|. ||.+.+.+.++.++++++++ + +.+++|=++.
T Consensus 56 ~~~~ql~~~~~~~~~~~~~~~~daV~-------tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~ 121 (300)
T 3zs7_A 56 MSLQEYDELMEGVRANNFLSNYRYIL-------TGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMG 121 (300)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCSEEE-------ECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC-
T ss_pred CCHHHHHHHHHHHHhcCCcccCCEEE-------ECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccc
Confidence 355677776666543331 345676 89999999999998888764 3 7899997664
No 447
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=30.05 E-value=91 Score=29.81 Aligned_cols=38 Identities=24% Similarity=0.176 Sum_probs=32.6
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 279 p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
-.+|.|-....+.+.++++.|+++|+-|+.|--|++..
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 47788888888999999999999999999997776543
No 448
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=29.95 E-value=77 Score=29.65 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=42.5
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|.|.....+.......+.-+-+.+ ..-++.++++++. .++.+++... | ++.++.++|.+.|+++
T Consensus 51 ~vy~sl~el~~~~~~Dv~Ii~vp~----~~~~~~~~ea~~~------Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~ 114 (288)
T 1oi7_A 51 PVYDTVKEAVAHHEVDASIIFVPA----PAAADAALEAAHA------GIPLIVLITE----G--IPTLDMVRAVEEIKAL 114 (288)
T ss_dssp EEESSHHHHHHHSCCSEEEECCCH----HHHHHHHHHHHHT------TCSEEEECCS----C--CCHHHHHHHHHHHHHH
T ss_pred EeeCCHHHHhhcCCCCEEEEecCH----HHHHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHHc
Confidence 445555555553334333322211 1123445555544 5675555432 3 3567789999999999
Q ss_pred CCEEEEccccc
Q 009517 303 GLVLLADEVYQ 313 (533)
Q Consensus 303 ~~~lI~De~y~ 313 (533)
++.++-..+..
T Consensus 115 gi~vigPNc~G 125 (288)
T 1oi7_A 115 GSRLIGGNCPG 125 (288)
T ss_dssp TCEEEESSSCE
T ss_pred CCEEEeCCCCe
Confidence 99988887553
No 449
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=29.84 E-value=75 Score=30.51 Aligned_cols=77 Identities=13% Similarity=0.290 Sum_probs=48.8
Q ss_pred CCcCcchHHHHHHh-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 009517 222 IPQYPLYSASIALH-GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (533)
Q Consensus 222 ~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~ 300 (533)
-|.|....++.... ++.+.-+-+... .-.+.+.+++... .++.+++..-. +++++.++|.++|+
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~-----Gv~~vViiT~G------~~e~~~~~l~~~a~ 128 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYA-----QIRTIAIIAEG------IPEALTRKLIKKAD 128 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTST-----TCCEEEECCSC------CCHHHHHHHHHHHH
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHC-----CCCEEEEECCC------CCHHHHHHHHHHHH
Confidence 47788877776654 344443333221 1246666666532 67777766544 33467899999999
Q ss_pred HcCCEEEEccccc
Q 009517 301 KEGLVLLADEVYQ 313 (533)
Q Consensus 301 ~~~~~lI~De~y~ 313 (533)
++++.||==.+..
T Consensus 129 ~~g~rliGPNc~G 141 (334)
T 3mwd_B 129 QKGVTIIGPATVG 141 (334)
T ss_dssp HHTCEEECSSCCC
T ss_pred HcCCEEEccCCcc
Confidence 9999888665553
No 450
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=29.65 E-value=89 Score=29.26 Aligned_cols=78 Identities=18% Similarity=0.126 Sum_probs=0.0
Q ss_pred EEEcCCh---HHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009517 193 IFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (533)
Q Consensus 193 i~~t~G~---~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~ 269 (533)
|+++.|+ .+++..+-.+-- ..-|.|++..|.|. .++.+.+.+..+.-.+..
T Consensus 76 viaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~------------------------~~~~~~l~~~f~~va~a~- 129 (293)
T 1f6k_A 76 LIAQVGSVNLKEAVELGKYATE-LGYDCLSAVTPFYY------------------------KFSFPEIKHYYDTIIAET- 129 (293)
T ss_dssp EEEECCCSCHHHHHHHHHHHHH-HTCSEEEEECCCSS------------------------CCCHHHHHHHHHHHHHHH-
T ss_pred EEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCC------------------------CCCHHHHHHHHHHHHHhC-
Q ss_pred CeeEEEEeCCCCCCccCCCHHHHHHHHH
Q 009517 270 TVRALVVINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 270 ~~~~iil~~p~NPtG~~~s~~~l~~i~~ 297 (533)
+...++.++|. .||+.++.+.+.+|++
T Consensus 130 ~lPiilYn~P~-~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 130 GSNMIVYSIPF-LTGVNMGIEQFGELYK 156 (293)
T ss_dssp CCCEEEEECHH-HHCCCCCHHHHHHHHT
T ss_pred CCCEEEEECcc-ccCcCCCHHHHHHHhc
No 451
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=29.57 E-value=39 Score=34.00 Aligned_cols=28 Identities=18% Similarity=0.571 Sum_probs=25.1
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 281 NPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 281 NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
+|.|-.||++++++|++.|+++||-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 4667789999999999999999998886
No 452
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=29.44 E-value=2.1e+02 Score=26.04 Aligned_cols=97 Identities=14% Similarity=0.099 Sum_probs=49.3
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
++-..+++|.|++..-..+.+.|. +.|-+|++..-.-.. ...+...+..|- -|.+.+++.++...+.
T Consensus 9 L~GK~alVTGas~GIG~aia~~la-~~Ga~V~~~~r~~~~-------~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 75 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFL-ELGAQVLTTARARPE-------GLPEELFVEADL-----TTKEGCAIVAEATRQR 75 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHH-HTTCEEEEEESSCCT-------TSCTTTEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCcHHHHHHHHHHH-HcCCEEEEEECCchh-------CCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 333445555555444444555555 678787775432110 111122344332 2677777777665333
Q ss_pred CCCeeEEEEeCCC--CCC-c--cCCCHHHHHHHHHH
Q 009517 268 GITVRALVVINPG--NPT-G--QVLAEENQRAIVDF 298 (533)
Q Consensus 268 g~~~~~iil~~p~--NPt-G--~~~s~~~l~~i~~l 298 (533)
-.+... +++|.. .+. | ..++.++|+++.++
T Consensus 76 ~G~iDi-lVnnAG~~~~~~~~~~~~~~e~~~~~~~v 110 (261)
T 4h15_A 76 LGGVDV-IVHMLGGSSAAGGGFSALSDDDWYNELSL 110 (261)
T ss_dssp TSSCSE-EEECCCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred cCCCCE-EEECCCCCccCCCCcccCCHHHHHHHHHH
Confidence 224544 455542 222 2 35678888887654
No 453
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=29.43 E-value=67 Score=32.57 Aligned_cols=74 Identities=8% Similarity=0.183 Sum_probs=45.1
Q ss_pred cCCcCcchHHHHHHh-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 009517 221 PIPQYPLYSASIALH-GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (533)
Q Consensus 221 ~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~ 299 (533)
.-|.|..|..+.... ......+-+.. ..-++.++++++. .+++ ++.+-+-| .+..++|.++|
T Consensus 20 ~~Pv~~~~~~~~~~p~~~DlavI~vPa----~~v~~~v~e~~~~------Gv~~-viis~Gf~------~~~~~~l~~~A 82 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPDANLALISVAG----EYAAELANQALDR------NLNV-MMFSDNVT------LEDEIQLKTRA 82 (480)
T ss_dssp CCEEESSHHHHHHHSTTCCEEEECSCH----HHHHHHHHHHHHT------TCEE-EECCCCCC------HHHHHHHHHHH
T ss_pred CCcccchHHHHHhcCCCCCEEEEecCH----HHHHHHHHHHHhc------CCCE-EEECCCCC------HHHHHHHHHHH
Confidence 467788888887774 34443333221 1124555555554 5674 44433322 56778999999
Q ss_pred HHcCCEEEEccc
Q 009517 300 KKEGLVLLADEV 311 (533)
Q Consensus 300 ~~~~~~lI~De~ 311 (533)
+++|+.||==.+
T Consensus 83 ~~~g~rliGPNc 94 (480)
T 3dmy_A 83 REKGLLVMGPDC 94 (480)
T ss_dssp HHTTCCEECSSC
T ss_pred HHcCCEEEecCc
Confidence 999998885554
No 454
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=29.32 E-value=46 Score=30.52 Aligned_cols=49 Identities=20% Similarity=0.341 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 009517 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~D 309 (533)
+|.+|.-.+.++... ...+|+|... .++.++++++.+.|++.|+.+++|
T Consensus 108 Dfi~~~~qi~ea~~~------GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvE 156 (251)
T 1i4n_A 108 DFYIDTVQVKLASSV------GADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVE 156 (251)
T ss_dssp CCCCSTHHHHHHHHT------TCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEE
T ss_pred eCCCCHHHHHHHHHc------CCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 467776666663332 4556666543 467788999999999999988887
No 455
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=29.04 E-value=80 Score=32.30 Aligned_cols=108 Identities=7% Similarity=0.179 Sum_probs=61.8
Q ss_pred CCCCCCCEEEcCChHHHHHHHHHHhcc---CCC-Ce------EEEcCCcCc-------------c------hHHHHHHhC
Q 009517 186 FPADPNDIFLTDGASPAVHMMMQLLIR---SEN-DG------ILCPIPQYP-------------L------YSASIALHG 236 (533)
Q Consensus 186 ~~~~~~~i~~t~G~~~al~~~~~~l~~---~~g-d~------Vlv~~p~~~-------------~------~~~~~~~~g 236 (533)
..++.+.|.++..+..++...++.|.+ ..+ .. .+...|.|. + +.+.+..++
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~K 181 (507)
T 1now_A 102 LLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNK 181 (507)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTT
T ss_pred EEEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhC
Confidence 335667788887666666665555531 111 11 223335543 1 123444566
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 237 ~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
.++..+.+.++.+|.+..+...+.-+. | .- .| |-.||.+++++|++.|+++++-||-
T Consensus 182 lN~lh~HltDdq~wr~e~~~~P~Lt~~----G-a~---------~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 182 FNVLHWHIVDDQSFPYQSITFPELSNK----G-SY---------SL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCHHHHHH----H-SS---------ST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEeeccCccceeeccchhhhhcc----c-Cc---------CC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 666666666655666543333222111 0 00 12 5679999999999999999998885
No 456
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=28.89 E-value=1.5e+02 Score=27.01 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=49.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g--~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
..+++|.|+...-..+.+.|. ..|..|++..-.-........... .++..+..|- -|.+.+++.++.....-
T Consensus 22 k~vlVTGas~gIG~aia~~La-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 95 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFA-EAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV-----RDRAAMSAAVDNLPEEF 95 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHTCCGGG
T ss_pred cEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHh
Confidence 345555544444445555555 578777765433222233333322 2566666653 37888888887532211
Q ss_pred CCeeEEEEeCCCC--CCc--cCCCHHHHHHHHH
Q 009517 269 ITVRALVVINPGN--PTG--QVLAEENQRAIVD 297 (533)
Q Consensus 269 ~~~~~iil~~p~N--PtG--~~~s~~~l~~i~~ 297 (533)
.+...+| ++..- +.+ ...+.++|+++.+
T Consensus 96 g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~~ 127 (272)
T 2nwq_A 96 ATLRGLI-NNAGLALGTDPAQSCDLDDWDTMVD 127 (272)
T ss_dssp SSCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 2344444 44421 112 2355666666544
No 457
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=28.62 E-value=1.4e+02 Score=25.34 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHcCC--EEEEcccc
Q 009517 291 NQRAIVDFCKKEGL--VLLADEVY 312 (533)
Q Consensus 291 ~l~~i~~l~~~~~~--~lI~De~y 312 (533)
+..++++.++++|+ +.|.|..-
T Consensus 102 ~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 102 DTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCTT
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46677788888764 55555443
No 458
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=28.38 E-value=2.7e+02 Score=23.48 Aligned_cols=107 Identities=11% Similarity=0.045 Sum_probs=47.7
Q ss_pred CCCCCEEEcCChHHHHHHHHHHhccCCC--CeEEEcCCcCcchHHH-HHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009517 188 ADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSAS-IALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (533)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~p~~~~~~~~-~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~ 264 (533)
+++++|++..-+..+...+..++. .+. +.+++..|.+...... .......+..+--.. +.-+.++..++..+..
T Consensus 99 ~d~~~~~l~G~S~Gg~~a~~~a~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~~--D~~v~~~~~~~~~~~l 175 (209)
T 3og9_A 99 LDVHKMIAIGYSNGANVALNMFLR-GKINFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAPN--DMIVPQKNFGDLKGDL 175 (209)
T ss_dssp CCGGGCEEEEETHHHHHHHHHHHT-TSCCCSEEEEESCCCCCCCCCCCCCTTCEEEEEECTT--CSSSCHHHHHHHHHHH
T ss_pred CCcceEEEEEECHHHHHHHHHHHh-CCcccceEEEECCCCCCcccccccccCCCEEEEcCCC--CCccCHHHHHHHHHHH
Confidence 456677665444444444333333 333 4566666654321110 011122222222222 2234444433333222
Q ss_pred HhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 265 ~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
+..+ ...-+...+ .|-.++.+.++++.++.+++
T Consensus 176 ~~~~--~~~~~~~~~---~gH~~~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 176 EDSG--CQLEIYESS---LGHQLTQEEVLAAKKWLTET 208 (209)
T ss_dssp HHTT--CEEEEEECS---STTSCCHHHHHHHHHHHHHH
T ss_pred HHcC--CceEEEEcC---CCCcCCHHHHHHHHHHHHhh
Confidence 2222 233333332 45566788888888887764
No 459
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=28.05 E-value=1.4e+02 Score=28.28 Aligned_cols=90 Identities=11% Similarity=0.163 Sum_probs=51.1
Q ss_pred CEEEcCC---hHHHHHHHHHHhccCCC-CeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 009517 192 DIFLTDG---ASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (533)
Q Consensus 192 ~i~~t~G---~~~al~~~~~~l~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~ 267 (533)
-|+++.| ..+++..+-.+-- -.+ |.|++..|.|... +.+.+.+..+.-.+.
T Consensus 78 pViaGvg~~~t~~ai~la~~A~~-~Ga~davlv~~P~y~~~------------------------s~~~l~~~f~~va~a 132 (311)
T 3h5d_A 78 PLIAGVGTNDTRDSIEFVKEVAE-FGGFAAGLAIVPYYNKP------------------------SQEGMYQHFKAIADA 132 (311)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHH-SCCCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHHS
T ss_pred cEEEeCCCcCHHHHHHHHHHHHh-cCCCcEEEEcCCCCCCC------------------------CHHHHHHHHHHHHHh
Confidence 4777665 4555555444432 245 8999999988531 233344333332221
Q ss_pred CCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 009517 268 GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEV 311 (533)
Q Consensus 268 g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~De~ 311 (533)
. +...++.++|.. ||+.++.+.+.+|++ --|+.=|=|..
T Consensus 133 ~-~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKdss 171 (311)
T 3h5d_A 133 S-DLPIIIYNIPGR-VVVELTPETMLRLAD---HPNIIGVKECT 171 (311)
T ss_dssp C-SSCEEEEECHHH-HSSCCCHHHHHHHHT---STTEEEEEECS
T ss_pred C-CCCEEEEecccc-cCCCCCHHHHHHHhc---CCCEEEEEeCC
Confidence 2 345666666653 789999777776654 23555565543
No 460
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=28.04 E-value=1.5e+02 Score=28.00 Aligned_cols=88 Identities=16% Similarity=0.232 Sum_probs=48.2
Q ss_pred CEEEcCC---hHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDG---ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G---~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
-|+++.| ..+++..+-.+-- ..-|.|++..|.|... +.+.+.+..+.-.+..
T Consensus 93 pViaGvg~~st~~ai~la~~A~~-~Gadavlv~~P~y~~~------------------------~~~~l~~~f~~va~a~ 147 (315)
T 3si9_A 93 PVVAGAGSNSTSEAVELAKHAEK-AGADAVLVVTPYYNRP------------------------NQRGLYTHFSSIAKAI 147 (315)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSSCC------------------------CHHHHHHHHHHHHHHC
T ss_pred cEEEeCCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCCCC------------------------CHHHHHHHHHHHHHcC
Confidence 4676655 4555655544443 2338999999988532 2233333322221111
Q ss_pred CCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEc
Q 009517 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-GLVLLAD 309 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~-~~~lI~D 309 (533)
+...++.+.|. .||+.++.+.+.+| ++++ |+.=|=|
T Consensus 148 -~lPiilYn~P~-~tg~~l~~~~~~~L---a~~~pnIvgiKd 184 (315)
T 3si9_A 148 -SIPIIIYNIPS-RSVIDMAVETMRDL---CRDFKNIIGVKD 184 (315)
T ss_dssp -SSCEEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEE
T ss_pred -CCCEEEEeCch-hhCCCCCHHHHHHH---HhhCCCEEEEEe
Confidence 45567777775 37888887666555 4433 4544544
No 461
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.93 E-value=95 Score=27.03 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=35.2
Q ss_pred EEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCC-HHHHHHHHHHHHhcCCCe
Q 009517 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLE-TSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 193 i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld-~~~l~~~i~~~~~~g~~~ 271 (533)
|++|.++...-..+++.|. +.|.+|++..-.-..... ..+ +..+..|- .| .+.+.++++ +.
T Consensus 3 ilItGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~---~~~--~~~~~~D~-----~d~~~~~~~~~~-------~~ 64 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLS-TTDYQIYAGARKVEQVPQ---YNN--VKAVHFDV-----DWTPEEMAKQLH-------GM 64 (219)
T ss_dssp EEEESTTSHHHHHHHHHHT-TSSCEEEEEESSGGGSCC---CTT--EEEEECCT-----TSCHHHHHTTTT-------TC
T ss_pred EEEECCCCHHHHHHHHHHH-HCCCEEEEEECCccchhh---cCC--ceEEEecc-----cCCHHHHHHHHc-------CC
Confidence 6666655555556666676 667777665422111110 023 33344332 25 778877775 35
Q ss_pred eEEEEe
Q 009517 272 RALVVI 277 (533)
Q Consensus 272 ~~iil~ 277 (533)
.+||.+
T Consensus 65 d~vi~~ 70 (219)
T 3dqp_A 65 DAIINV 70 (219)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 566644
No 462
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.75 E-value=1.4e+02 Score=27.73 Aligned_cols=19 Identities=32% Similarity=0.307 Sum_probs=12.1
Q ss_pred hHHHHHHhCCeEEEEecCC
Q 009517 228 YSASIALHGGTLVPYYLDE 246 (533)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~ 246 (533)
....++..|.+.+.+|+..
T Consensus 37 ~~~~lk~~G~N~VRi~~~~ 55 (302)
T 1bqc_A 37 AFADIKSHGANTVRVVLSN 55 (302)
T ss_dssp HHHHHHHTTCSEEEEEECC
T ss_pred HHHHHHHcCCCEEEEEccC
Confidence 3445566777777777653
No 463
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=27.65 E-value=68 Score=30.31 Aligned_cols=76 Identities=13% Similarity=0.209 Sum_probs=45.3
Q ss_pred CcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 009517 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (533)
Q Consensus 223 p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~ 302 (533)
|.|....++.......+..+-+.+ ..-.+.++++++. .++.+++..+. . +.++.+++.+.|+++
T Consensus 58 ~vy~sl~el~~~~~vD~avI~vP~----~~~~~~~~e~i~~------Gi~~iv~~t~G----~--~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 58 PVFNTVKEAKEQTGATASVIYVPP----PFAAAAINEAIDA------EVPLVVCITEG----I--PQQDMVRVKHRLLRQ 121 (305)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCH----HHHHHHHHHHHHT------TCSEEEECCCC----C--CHHHHHHHHHHHTTC
T ss_pred eeechHHHhhhcCCCCEEEEecCH----HHHHHHHHHHHHC------CCCEEEEECCC----C--ChHHHHHHHHHHHhc
Confidence 445555666553344444433221 1124455555554 56776665553 2 445677999999999
Q ss_pred -CCEEEEcccccc
Q 009517 303 -GLVLLADEVYQE 314 (533)
Q Consensus 303 -~~~lI~De~y~~ 314 (533)
|+.+|-+.+..-
T Consensus 122 ~gi~liGPnc~Gi 134 (305)
T 2fp4_A 122 GKTRLIGPNCPGV 134 (305)
T ss_dssp SSCEEECSSSCEE
T ss_pred CCcEEEeCCCCeE
Confidence 999988776643
No 464
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=27.54 E-value=3.2e+02 Score=24.15 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=47.0
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.++...-..+.+.|. ..|.+|++..-.-.. ...+ +..+..|- -|.+.+++.++...+...+
T Consensus 8 k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~-----~~~~--~~~~~~D~-----~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFV-EAGAKVTGFDQAFTQ-----EQYP--FATEVMDV-----ADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCCCS-----SCCS--SEEEECCT-----TCHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCchhh-----hcCC--ceEEEcCC-----CCHHHHHHHHHHHHHHcCC
Confidence 456666555444455556665 567777764422111 1123 33344432 2678888777654332224
Q ss_pred eeEEEEeCCC-CCCc--cCCCHHHHHHHHH
Q 009517 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (533)
Q Consensus 271 ~~~iil~~p~-NPtG--~~~s~~~l~~i~~ 297 (533)
...+| ++.. .+.+ ...+.++|+++.+
T Consensus 75 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 75 LDALV-NAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp CCEEE-ECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 55554 4432 2222 2356677776554
No 465
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=27.51 E-value=39 Score=36.37 Aligned_cols=28 Identities=18% Similarity=0.321 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccc
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQEN 315 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~ 315 (533)
+.++++++++.|+++|+-||.|-||...
T Consensus 253 ~~~efk~lV~~~H~~Gi~VilDvV~NH~ 280 (714)
T 2ya0_A 253 RIAEFKNLINEIHKRGMGAILDVVYNHT 280 (714)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred hHHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 3689999999999999999999999864
No 466
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=27.17 E-value=1.4e+02 Score=27.42 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=49.0
Q ss_pred hHHHHHHhCCe-EEEEecCCCCC-----------CCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCcc--CCCHHHHH
Q 009517 228 YSASIALHGGT-LVPYYLDEATG-----------WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ--VLAEENQR 293 (533)
Q Consensus 228 ~~~~~~~~g~~-~~~v~~~~~~~-----------~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~--~~s~~~l~ 293 (533)
....+...|.+ .+..|+.+.+. -+.+.+++++.++...+.-+....| ||-+|. +-+++-++
T Consensus 71 ~a~~A~~~G~EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~Gv-----nNHmGS~~T~~~~~M~ 145 (261)
T 2qv5_A 71 WMQDARREGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGV-----MNYLGGRFLAEQSALE 145 (261)
T ss_dssp HHHHHHHHTCCEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEE-----EEEECTTGGGCHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEE-----ecccccchhcCHHHHH
Confidence 44555667775 45677764321 1257899999988875554443322 344454 44566799
Q ss_pred HHHHHHHHcCCEEEEcc
Q 009517 294 AIVDFCKKEGLVLLADE 310 (533)
Q Consensus 294 ~i~~l~~~~~~~lI~De 310 (533)
.+.+.++++|++++ |.
T Consensus 146 ~vm~~L~~~gL~Fl-DS 161 (261)
T 2qv5_A 146 PVMRDIGKRGLLFL-DD 161 (261)
T ss_dssp HHHHHHHHTTCEEE-EC
T ss_pred HHHHHHHHCCCEEE-cC
Confidence 99999999987665 53
No 467
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=27.03 E-value=39 Score=33.86 Aligned_cols=28 Identities=25% Similarity=0.655 Sum_probs=24.9
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 281 NPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 281 NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
+|.|-.||++++++|++.|+++||-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3567789999999999999999998886
No 468
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=26.97 E-value=3.1e+02 Score=27.73 Aligned_cols=98 Identities=13% Similarity=0.149 Sum_probs=52.7
Q ss_pred CEEEcCChHHHH-HHHHHHhccCCCC-eEEEcCCc---Cc---chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 009517 192 DIFLTDGASPAV-HMMMQLLIRSEND-GILCPIPQ---YP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (533)
Q Consensus 192 ~i~~t~G~~~al-~~~~~~l~~~~gd-~Vlv~~p~---~~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~ 263 (533)
.+++.+|++.+| ..+.+.|. ..|. .|++..-. -. .....+...|.++..+.+|-. |.+.+++.++.
T Consensus 240 ~~vLITGgsgGIG~alA~~La-~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt-----d~~~v~~~~~~ 313 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLA-EQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAA-----DREALAALLAE 313 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHH-HTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHT
T ss_pred CEEEEECCCCchHHHHHHHHH-HCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHHHHH
Confidence 444444444444 44445555 4564 55553321 11 223345567889988888743 78999988876
Q ss_pred HHhcCCCeeEEEEeCCC-C-CCc--cCCCHHHHHHHHH
Q 009517 264 AKAKGITVRALVVINPG-N-PTG--QVLAEENQRAIVD 297 (533)
Q Consensus 264 ~~~~g~~~~~iil~~p~-N-PtG--~~~s~~~l~~i~~ 297 (533)
....+ +...|| ++.. . ..+ ..++.++++++.+
T Consensus 314 i~~~g-~ld~vV-h~AGv~~~~~~l~~~t~e~~~~vl~ 349 (496)
T 3mje_A 314 LPEDA-PLTAVF-HSAGVAHDDAPVADLTLGQLDALMR 349 (496)
T ss_dssp CCTTS-CEEEEE-ECCCCCCSCCCTTTCCHHHHHHHHH
T ss_pred HHHhC-CCeEEE-ECCcccCCCCCcccCCHHHHHHHHH
Confidence 43332 455554 4432 1 222 2456666666543
No 469
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=26.73 E-value=2.7e+02 Score=24.14 Aligned_cols=64 Identities=9% Similarity=0.066 Sum_probs=44.9
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC----C
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG----L 304 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~----~ 304 (533)
...++..|.+++.+.. .+.++.+.++++.. ++.+|.+..-..+ +.+.++++++.+++.+ +
T Consensus 109 a~~l~~~G~~v~~LG~------~vp~~~l~~~~~~~-----~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~~~~~~ 172 (210)
T 1y80_A 109 AMMLESGGFTVYNLGV------DIEPGKFVEAVKKY-----QPDIVGMSALLTT-----TMMNMKSTIDALIAAGLRDRV 172 (210)
T ss_dssp HHHHHHTTCEEEECCS------SBCHHHHHHHHHHH-----CCSEEEEECCSGG-----GTHHHHHHHHHHHHTTCGGGC
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCC
Confidence 3466778999887653 45789999988876 7778877754322 3456888888888765 5
Q ss_pred EEEE
Q 009517 305 VLLA 308 (533)
Q Consensus 305 ~lI~ 308 (533)
.|++
T Consensus 173 ~v~v 176 (210)
T 1y80_A 173 KVIV 176 (210)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5554
No 470
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=26.61 E-value=3.5e+02 Score=25.20 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=41.1
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 009517 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE---GLVLLA 308 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~---~~~lI~ 308 (533)
+..+|.+.+++.++...+.| +..|+++ -++--+..+|.++.+++++.+.+. ++.||.
T Consensus 30 dg~iD~~~l~~lv~~li~~G--v~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQG--CDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTT--CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcC--CCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44799999999988765554 5566544 333445779999999999988874 467766
No 471
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.60 E-value=3.4e+02 Score=24.11 Aligned_cols=75 Identities=15% Similarity=-0.028 Sum_probs=37.0
Q ss_pred EEEcCC-hHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 193 IFLTDG-ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 193 i~~t~G-~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
|.+..+ -.+++..+-..+- ..|..|++....-..+.. +..+..++.++++ .-++..+|..++..+.
T Consensus 41 I~vi~~~le~av~~a~~~~~-~~~~dVIISRGgta~~Lr--~~~~iPVV~I~vs--------~~Dil~aL~~a~~~~~-- 107 (225)
T 2pju_A 41 ITPIQLGFEKAVTYIRKKLA-NERCDAIIAAGSNGAYLK--SRLSVPVILIKPS--------GYDVLQFLAKAGKLTS-- 107 (225)
T ss_dssp EEEECCCHHHHHHHHHHHTT-TSCCSEEEEEHHHHHHHH--TTCSSCEEEECCC--------HHHHHHHHHHTTCTTS--
T ss_pred EEEecCcHHHHHHHHHHHHh-cCCCeEEEeCChHHHHHH--hhCCCCEEEecCC--------HHHHHHHHHHHHhhCC--
Confidence 444333 4456666555442 234446666543322221 2346777777654 4556666666544332
Q ss_pred eEEEEeCCC
Q 009517 272 RALVVINPG 280 (533)
Q Consensus 272 ~~iil~~p~ 280 (533)
+.-++..++
T Consensus 108 kIavVg~~~ 116 (225)
T 2pju_A 108 SIGVVTYQE 116 (225)
T ss_dssp CEEEEEESS
T ss_pred cEEEEeCch
Confidence 333444444
No 472
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=26.06 E-value=3.6e+02 Score=24.24 Aligned_cols=99 Identities=10% Similarity=0.029 Sum_probs=48.5
Q ss_pred CCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCc---chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+ ...-..+.+.|. ..|.+|++..-.-. .........+ .+..+..|- -|.+.+++.++...
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~-----~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDV-----SKEEHFKSLYNSVK 79 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCC-----CCHHHHHHHHHHHH
Confidence 456666654 444455555565 67877776543222 1112222223 244455442 26778877776643
Q ss_pred hcCCCeeEEEEeCCC-CCC----c--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG-NPT----G--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~-NPt----G--~~~s~~~l~~i~~ 297 (533)
....+...+| ++.. .+. + ...+.+++++..+
T Consensus 80 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 117 (275)
T 2pd4_A 80 KDLGSLDFIV-HSVAFAPKEALEGSLLETSKSAFNTAME 117 (275)
T ss_dssp HHTSCEEEEE-ECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCccCccccCCCCcccCCHHHHHHHHH
Confidence 3223455544 4442 111 1 1456666666544
No 473
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=25.93 E-value=2.8e+02 Score=25.44 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=32.1
Q ss_pred CCHHHHHHHHHHHHhcC--CCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHH---cC--CEEEEcccc
Q 009517 252 LETSEVKKQLEAAKAKG--ITVRALVVINPGNPTGQVLAEENQRAIVDFCKK---EG--LVLLADEVY 312 (533)
Q Consensus 252 ld~~~l~~~i~~~~~~g--~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~---~~--~~lI~De~y 312 (533)
++.+.+++.++.....+ .+..+|+ +|...+.+..+.+.+++++ ++ +.+++|=++
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~d~v~-------~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm 117 (289)
T 3pzs_A 57 MPASHLTDIVQGIADIDRLKDCDAVL-------SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVM 117 (289)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCCEEE-------ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCC
T ss_pred CCHHHHHHHHHHHHhcCCccCCCEEE-------ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCcc
Confidence 45566666665443221 1455665 5777777766666665554 34 889999544
No 474
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=25.90 E-value=77 Score=29.39 Aligned_cols=92 Identities=9% Similarity=0.059 Sum_probs=54.2
Q ss_pred EEcCChHHHHHHHHHHhccCCCCeEEEcCCc--CcchHHHHHHhCCeEEEEecCCCCCCCCC-HHHHHHHHHHHHhcCCC
Q 009517 194 FLTDGASPAVHMMMQLLIRSENDGILCPIPQ--YPLYSASIALHGGTLVPYYLDEATGWGLE-TSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 194 ~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~--~~~~~~~~~~~g~~~~~v~~~~~~~~~ld-~~~l~~~i~~~~~~g~~ 270 (533)
+...+..+++...+.... .+|.+|+++.+. -......++..|+++..+++..... ..+ .+.+.+.+... + .
T Consensus 137 ~p~~~~ae~L~~~l~~~~-~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~-~~~~~~~~~~~l~~~---~-~ 210 (286)
T 1jr2_A 137 GETCGNAEKLAEYICSRE-SSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVA-HPGIQGNLNSYYSQQ---G-V 210 (286)
T ss_dssp CCSCSSHHHHHHHHHTSC-CCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEE-CTTHHHHHHHHHHHH---C-S
T ss_pred CCCccCHHHHHHHHHhcc-cCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEee-CCCcHHHHHHHHHhC---C-C
Confidence 345566777766665432 357889887654 3346778888999998888764210 112 23555555431 1 4
Q ss_pred eeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 009517 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (533)
Q Consensus 271 ~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~ 301 (533)
..+|++.+|+ .++.+.+.+.+
T Consensus 211 ~d~v~ftS~~----------~v~~f~~~~~~ 231 (286)
T 1jr2_A 211 PASITFFSPS----------GLTYSLKHIQE 231 (286)
T ss_dssp CSEEEESSHH----------HHHHHHHHHHH
T ss_pred CCEEEEEChH----------HHHHHHHHHhh
Confidence 5566655543 36666665543
No 475
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=25.65 E-value=3.6e+02 Score=24.03 Aligned_cols=21 Identities=10% Similarity=0.166 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHc--CCEEEEc
Q 009517 289 EENQRAIVDFCKKE--GLVLLAD 309 (533)
Q Consensus 289 ~~~l~~i~~l~~~~--~~~lI~D 309 (533)
.+.++++.++..++ ++.|-+|
T Consensus 151 l~kI~~lr~~~~~~~~~~~I~Vd 173 (231)
T 3ctl_A 151 LDKLAELKAWREREGLEYEIEVD 173 (231)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHHHHhccCCCceEEEE
Confidence 34455666666543 5677666
No 476
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=25.49 E-value=1.7e+02 Score=27.73 Aligned_cols=115 Identities=11% Similarity=0.053 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHhccCCC--CeEEEcC--CcCcchHHHH--HHhCCeEEEEecC
Q 009517 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPI--PQYPLYSASI--ALHGGTLVPYYLD 245 (533)
Q Consensus 172 lr~aia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~--p~~~~~~~~~--~~~g~~~~~v~~~ 245 (533)
.++.|+++-... +....+++|.|.+.....+++.+. +.| -+|++.+ |.+.+...+. ...|..+..++-.
T Consensus 107 a~~~I~~~~~~~----I~~g~~ILTh~~S~tv~~~l~~A~-~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Ds 181 (315)
T 3ecs_A 107 SRNKIADLCHTF----IKDGATILTHAYSRVVLRVLEAAV-AAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDA 181 (315)
T ss_dssp HHHHHHHHHGGG----CCTTEEEEECSCCHHHHHHHHHHH-TTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGG
T ss_pred HHHHHHHHHHHH----cCCCCEEEEcCCcHHHHHHHHHHH-HcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehh
Confidence 355566665443 455678888776666666666654 344 3466554 6555544433 3357776665422
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 009517 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (533)
Q Consensus 246 ~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~-~p~NPtG~~~s~~~l~~i~~l~~~~~~~lI~ 308 (533)
.+-..++ ++..|++- .---..|.+..+----.++-+|+.+++.+++
T Consensus 182 ----------a~~~~m~-------~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V 228 (315)
T 3ecs_A 182 ----------AVGYIME-------KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYV 228 (315)
T ss_dssp ----------GHHHHGG-------GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred ----------HHHHHHH-------hCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEE
Confidence 1222222 34455544 3222334444433345677788899987665
No 477
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=25.40 E-value=4.1e+02 Score=24.70 Aligned_cols=57 Identities=12% Similarity=0.161 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 009517 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE---GLVLLA 308 (533)
Q Consensus 249 ~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~---~~~lI~ 308 (533)
+..+|.+.+++.++...+.| +..|+++ -++--+..++.++.+++++.+.+. .+.||.
T Consensus 31 dg~iD~~~l~~lv~~li~~G--v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDKG--LDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTT--CCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcC--CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 45899999999988765554 5566544 333345679999999999988864 366664
No 478
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=25.38 E-value=43 Score=33.57 Aligned_cols=29 Identities=14% Similarity=0.286 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+.++++++++.|+++|+-||.|-|+....
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 57899999999999999999999987643
No 479
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=25.30 E-value=3.7e+02 Score=24.02 Aligned_cols=81 Identities=14% Similarity=0.033 Sum_probs=39.1
Q ss_pred CCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCcc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+ ...-..+.+.|. ..|.+|++..-.-.. ........+. ...+..|- -|.+.+++.++...
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~-----~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMH-REGAELAFTYQNDKLKGRVEEFAAQLGS-DIVLQCDV-----AEDASIDTMFAELG 82 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEcCcHHHHHHHHHHHHhcCC-cEEEEccC-----CCHHHHHHHHHHHH
Confidence 345665544 344444555555 567777665422211 1111122232 24444442 26788888877654
Q ss_pred hcCCCeeEEEEeCC
Q 009517 266 AKGITVRALVVINP 279 (533)
Q Consensus 266 ~~g~~~~~iil~~p 279 (533)
..-.+...+| ++.
T Consensus 83 ~~~g~iD~lv-~~A 95 (265)
T 1qsg_A 83 KVWPKFDGFV-HSI 95 (265)
T ss_dssp TTCSSEEEEE-ECC
T ss_pred HHcCCCCEEE-ECC
Confidence 3333455544 444
No 480
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=25.30 E-value=88 Score=16.86 Aligned_cols=18 Identities=22% Similarity=0.298 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009517 413 AERDGILSSLARRAKTLE 430 (533)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~ 430 (533)
.+++.+.+++++.++.++
T Consensus 8 keledlqerlrklrkklr 25 (27)
T 3twe_A 8 KELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 445566666666655554
No 481
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=25.21 E-value=2.5e+02 Score=25.78 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=28.5
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchHHHH---H-HhCCeEEEEecCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASI---A-LHGGTLVPYYLDE 246 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~~~~---~-~~g~~~~~v~~~~ 246 (533)
..+++|.|+...-..+.+.|. ..|-.|++.. -.-....... . ..|.++..+..|-
T Consensus 10 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl 69 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 69 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeec
Confidence 345666555444455555665 5687777654 2222222222 1 3366677776654
No 482
>2lqh_B Forkhead box O3, FOXO3A; promiscuous binding, intrinsic disorder, transcription; NMR {Homo sapiens} PDB: 2lqi_B
Probab=31.05 E-value=15 Score=22.98 Aligned_cols=25 Identities=32% Similarity=0.337 Sum_probs=20.2
Q ss_pred ccchhhhhhhhhhcccccCcccccc
Q 009517 7 GRGRNFLNRSHQQNLLSSSSSHCQS 31 (533)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (533)
|..+||-|..++.-|-|.++||+.-
T Consensus 1 gsmshygnqtlqdlltsdslshsdg 25 (52)
T 2lqh_B 1 GSMSHYGNQTLQDLLTSDSLSHSDG 25 (52)
Confidence 4568999999999888888888653
No 483
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=25.07 E-value=3.9e+02 Score=24.21 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=46.4
Q ss_pred CEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCcc---hHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 009517 192 DIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (533)
Q Consensus 192 ~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~~---~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~ 266 (533)
.+++|.|+ ...-..+.+.|. ..|.+|++..-.-.. ........|. +..+..|- -|.+.+++.++...+
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~Dl-----~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFH-REGAQLAFTYATPKLEKRVREIAKGFGS-DLVVKCDV-----SLDEDIKNLKKFLEE 95 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHTTC-CCEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 45655544 333444555555 567777765422221 1112222232 34455442 267788777765433
Q ss_pred cCCCeeEEEEeCCC-CCC----c--cCCCHHHHHHHHH
Q 009517 267 KGITVRALVVINPG-NPT----G--QVLAEENQRAIVD 297 (533)
Q Consensus 267 ~g~~~~~iil~~p~-NPt----G--~~~s~~~l~~i~~ 297 (533)
...+...+| ++.. .+. + ...+.+++++..+
T Consensus 96 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 132 (285)
T 2p91_A 96 NWGSLDIIV-HSIAYAPKEEFKGGVIDTSREGFKIAMD 132 (285)
T ss_dssp HTSCCCEEE-ECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence 222455554 4442 111 1 1456666766554
No 484
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.07 E-value=1.5e+02 Score=28.07 Aligned_cols=75 Identities=13% Similarity=0.149 Sum_probs=0.0
Q ss_pred cCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE
Q 009517 196 TDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV 275 (533)
Q Consensus 196 t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~ii 275 (533)
+++..+++..+-.+-- ..-|.|++..|.|. .++.+.+.+..+.-.+.. +...++
T Consensus 101 ~~st~eai~la~~A~~-~Gadavlv~~P~y~------------------------~~s~~~l~~~f~~va~a~-~lPiil 154 (314)
T 3qze_A 101 ANSTREAVALTEAAKS-GGADACLLVTPYYN------------------------KPTQEGMYQHFRHIAEAV-AIPQIL 154 (314)
T ss_dssp CSSHHHHHHHHHHHHH-TTCSEEEEECCCSS------------------------CCCHHHHHHHHHHHHHHS-CSCEEE
T ss_pred CcCHHHHHHHHHHHHH-cCCCEEEEcCCCCC------------------------CCCHHHHHHHHHHHHHhc-CCCEEE
Q ss_pred EeCCCCCCccCCCHHHHHHHHH
Q 009517 276 VINPGNPTGQVLAEENQRAIVD 297 (533)
Q Consensus 276 l~~p~NPtG~~~s~~~l~~i~~ 297 (533)
.+.|.. ||+.++.+.+.+|++
T Consensus 155 Yn~P~~-tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 155 YNVPGR-TSCDMLPETVERLSK 175 (314)
T ss_dssp EECHHH-HSCCCCHHHHHHHHT
T ss_pred EeCccc-cCCCCCHHHHHHHhc
No 485
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.00 E-value=2.9e+02 Score=26.01 Aligned_cols=91 Identities=14% Similarity=0.168 Sum_probs=45.6
Q ss_pred CEEEcCC---hHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 009517 192 DIFLTDG---ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (533)
Q Consensus 192 ~i~~t~G---~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g 268 (533)
-|+++.| ..+++..+-.+-- ..-|.|++..|.|.+- ..+.+.+.+..+.-.+..
T Consensus 82 pviaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~~k----------------------p~~~~~l~~~f~~ia~a~ 138 (318)
T 3qfe_A 82 PIMAGVGAHSTRQVLEHINDASV-AGANYVLVLPPAYFGK----------------------ATTPPVIKSFFDDVSCQS 138 (318)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHH-HTCSEEEECCCCC-------------------------CCCHHHHHHHHHHHHHHC
T ss_pred cEEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCcccCC----------------------CCCHHHHHHHHHHHHhhC
Confidence 4677655 4555655544442 2338999999976420 012233333322221111
Q ss_pred CCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEc
Q 009517 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-GLVLLAD 309 (533)
Q Consensus 269 ~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~-~~~lI~D 309 (533)
+...++.+.|..-||+.++.+.+.+| ++++ |+.=|=|
T Consensus 139 -~lPiilYn~P~~t~g~~l~~~~~~~L---a~~~pnIvgiKd 176 (318)
T 3qfe_A 139 -PLPVVIYNFPGVCNGIDLDSDMITTI---ARKNPNVVGVKL 176 (318)
T ss_dssp -SSCEEEEECCC----CCCCHHHHHHH---HHHCTTEEEEEE
T ss_pred -CCCEEEEeCCcccCCCCCCHHHHHHH---HhhCCCEEEEEe
Confidence 35567777777645999996666655 4443 4444544
No 486
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=24.74 E-value=2.1e+02 Score=26.87 Aligned_cols=102 Identities=10% Similarity=0.028 Sum_probs=50.3
Q ss_pred CCCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchH---HHHHHhC-----CeEEEEecCCCCCCCCCHHHHHHHH
Q 009517 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHG-----GTLVPYYLDEATGWGLETSEVKKQL 261 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~---~~~~~~g-----~~~~~v~~~~~~~~~ld~~~l~~~i 261 (533)
...|++|.|+--.-..+++.|. ..|.+|++..-.-.... ..+.... ..+..+..|- -|.+.+++++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~~~~~~ 98 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLL-KLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-----RDLTTCEQVM 98 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-----TCHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-----CCHHHHHHHh
Confidence 4568877665455555666666 56777766543222211 1122110 2344444432 2678888877
Q ss_pred HHHHhcCCCeeEEEEeCC-CCCCccCCCHH--------HHHHHHHHHHHcCC
Q 009517 262 EAAKAKGITVRALVVINP-GNPTGQVLAEE--------NQRAIVDFCKKEGL 304 (533)
Q Consensus 262 ~~~~~~g~~~~~iil~~p-~NPtG~~~s~~--------~l~~i~~l~~~~~~ 304 (533)
+. +.+||-+.. .++....-..+ -...+++.|++.++
T Consensus 99 ~~-------~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 99 KG-------VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp TT-------CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred cC-------CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 53 555554422 21111111111 13457888888874
No 487
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=24.53 E-value=54 Score=32.72 Aligned_cols=29 Identities=10% Similarity=0.242 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+.++++++++.|+++|+-||.|-++....
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 47899999999999999999999987643
No 488
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=24.36 E-value=56 Score=32.22 Aligned_cols=29 Identities=14% Similarity=0.263 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 009517 288 AEENQRAIVDFCKKEGLVLLADEVYQENV 316 (533)
Q Consensus 288 s~~~l~~i~~l~~~~~~~lI~De~y~~~~ 316 (533)
+.++++++++.|+++|+-||.|-++....
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 47899999999999999999999987643
No 489
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=24.35 E-value=3.7e+02 Score=23.81 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=34.2
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCC---CeEEEcCCcCcchH--HHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSEN---DGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~g---d~Vlv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~ 262 (533)
..|++|.|+...-..+.+.|. ..| ..|++..-.-.... ..+...+.++..+..|-. |.+.+++.++
T Consensus 22 k~vlITGasggIG~~la~~L~-~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~v~~~~~ 92 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALL-NLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLR-----NFDAYDKLVA 92 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHH-TSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTT-----CGGGHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHH-hcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCC-----ChHHHHHHHH
Confidence 356666655555555666666 567 67776543322222 122223556666666533 4455555544
No 490
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=23.86 E-value=45 Score=24.77 Aligned_cols=23 Identities=9% Similarity=0.153 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHcCCEEEEccccc
Q 009517 291 NQRAIVDFCKKEGLVLLADEVYQ 313 (533)
Q Consensus 291 ~l~~i~~l~~~~~~~lI~De~y~ 313 (533)
.-++|.++|+++|+.++.|..-.
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 37889999999999999996443
No 491
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=23.79 E-value=5.3e+02 Score=25.33 Aligned_cols=84 Identities=11% Similarity=0.035 Sum_probs=45.5
Q ss_pred CCCEEEcCChHHHHHHH--HHHhccCCCCeEEEcCCcC---------------cchHHHHHHhCCeEEEEecCCCCCCCC
Q 009517 190 PNDIFLTDGASPAVHMM--MQLLIRSENDGILCPIPQY---------------PLYSASIALHGGTLVPYYLDEATGWGL 252 (533)
Q Consensus 190 ~~~i~~t~G~~~al~~~--~~~l~~~~gd~Vlv~~p~~---------------~~~~~~~~~~g~~~~~v~~~~~~~~~l 252 (533)
...+++.+|++.++-.+ +...+...|-.|++..-.- ......+...|.++..+..|-.
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt----- 133 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF----- 133 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT-----
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC-----
Confidence 34455555555565555 4333325576665532110 1122344556888888887643
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 009517 253 ETSEVKKQLEAAKAKGITVRALVVINP 279 (533)
Q Consensus 253 d~~~l~~~i~~~~~~g~~~~~iil~~p 279 (533)
|.+.+++.++...+...+...+ ++|.
T Consensus 134 d~~~v~~~v~~i~~~~G~IDiL-VnNA 159 (418)
T 4eue_A 134 SNETKDKVIKYIKDEFGKIDLF-VYSL 159 (418)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE-EECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEE-EECC
Confidence 7888888877764443355544 4544
No 492
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=23.68 E-value=1.6e+02 Score=28.15 Aligned_cols=71 Identities=14% Similarity=0.038 Sum_probs=43.6
Q ss_pred cCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 224 QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
.|..+..++..-...++.+.... ....+...++++. -+-|++.-|- ..+.++.++|.++|+++|
T Consensus 55 ~~~~~~~ll~~~~vD~V~i~tp~----~~H~~~~~~al~a-------GkhV~~EKPl-----a~~~~e~~~l~~~a~~~g 118 (352)
T 3kux_A 55 VVSDPQMLFNDPSIDLIVIPTPN----DTHFPLAQSALAA-------GKHVVVDKPF-----TVTLSQANALKEHADDAG 118 (352)
T ss_dssp EESCHHHHHHCSSCCEEEECSCT----TTHHHHHHHHHHT-------TCEEEECSSC-----CSCHHHHHHHHHHHHHTT
T ss_pred eECCHHHHhcCCCCCEEEEeCCh----HHHHHHHHHHHHC-------CCcEEEECCC-----cCCHHHHHHHHHHHHHcC
Confidence 35556666665556666655432 2345555566654 2456665552 246778888888998888
Q ss_pred CEEEEcc
Q 009517 304 LVLLADE 310 (533)
Q Consensus 304 ~~lI~De 310 (533)
+.+.+..
T Consensus 119 ~~~~v~~ 125 (352)
T 3kux_A 119 LLLSVFH 125 (352)
T ss_dssp CCEEECC
T ss_pred CeEEEEe
Confidence 8777643
No 493
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=23.63 E-value=4.3e+02 Score=24.25 Aligned_cols=78 Identities=13% Similarity=0.114 Sum_probs=46.5
Q ss_pred CeEEEcCCcCcchHHHHHHhCCeEEEEe-cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHH
Q 009517 216 DGILCPIPQYPLYSASIALHGGTLVPYY-LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (533)
Q Consensus 216 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~-~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~ 294 (533)
..+++..|.| ...++.+|.+.+.+. +.+ +-.+.+..|.+.++..+.. ++++|+...-.+ ..-.+.
T Consensus 164 ~~~vt~H~af---~Y~~~~yGl~~~~~~~~~~--~~eps~~~l~~l~~~ik~~--~v~~if~e~~~~-------~~~~~~ 229 (282)
T 3mfq_A 164 RYLVTPHDAF---NYFAASYDFTLYAPQGVST--DSEVANSDMIETVNLIIDH--NIKAIFTESTTN-------PERMKK 229 (282)
T ss_dssp CEEECSSSCC---HHHHHHTTCEEECSSCSSS--CSCCCHHHHHHHHHHHHHH--TCCEEECBTTSC-------THHHHH
T ss_pred cEEEEECchH---HHHHHHCCCeEecccccCC--CCCCCHHHHHHHHHHHHHc--CCCEEEEeCCCC-------hHHHHH
Confidence 3455445554 445688999977543 222 2245666666655443322 688887553333 345788
Q ss_pred HHHHHHHcCCEEE
Q 009517 295 IVDFCKKEGLVLL 307 (533)
Q Consensus 295 i~~l~~~~~~~lI 307 (533)
|+++|++.|+-++
T Consensus 230 l~~~a~~~g~~v~ 242 (282)
T 3mfq_A 230 LQEAVKAKGGQVE 242 (282)
T ss_dssp HHHHHHTTSCCCE
T ss_pred HHHHHHhcCCceE
Confidence 8899999987544
No 494
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=23.43 E-value=2.2e+02 Score=23.77 Aligned_cols=59 Identities=12% Similarity=-0.005 Sum_probs=41.7
Q ss_pred HHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 009517 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (533)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~~ 303 (533)
...++..|.+++.... .+.++++.+++.+. ++.+|.++.-.. .+.+.++++++.+++.+
T Consensus 39 a~~l~~~G~eVi~lG~------~~p~e~lv~aa~~~-----~~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 39 ARALRDAGFEVVYTGL------RQTPEQVAMAAVQE-----DVDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHHHTTCEEECCCS------BCCHHHHHHHHHHT-----TCSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHhc-----CCCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 3456778988876654 34688888888775 677787775433 23567888888888864
No 495
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=23.38 E-value=1.6e+02 Score=24.58 Aligned_cols=97 Identities=10% Similarity=0.149 Sum_probs=55.4
Q ss_pred eeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-------CCEEEEccccccccccCCCCcccHHHHHhhcCCCC--CCce
Q 009517 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKE-------GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE--KDIS 341 (533)
Q Consensus 271 ~~~iil~~p~NPtG~~~s~~~l~~i~~l~~~~-------~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 341 (533)
.+++++....-+ ++.+++.+|++.++++ |+++..+..+-.. ..|. ...+..+...+..+. .++.
T Consensus 7 ~~liY~S~a~~~----~~~~~l~~Il~~a~~~N~~~gITG~Ll~~~g~F~Q~-LEG~--~~~V~~l~~rI~~D~RH~~v~ 79 (153)
T 2hfn_A 7 YRLIYSSQGIPN----LQPQDLKDILESSQRNNPANGITGLLCYSKPAFLQV-LEGE--CEQVNETYHRIVQDERHHSPQ 79 (153)
T ss_dssp EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHHTCEEEEEEETTEEEEE-EEEE--HHHHHHHHHHHHTCTTEEEEE
T ss_pred EEEEEEEeecCC----CCHHHHHHHHHHHHHhhhhcCcEEEEEEeCCEEEEE-eeCC--HHHHHHHHHHHhcCCCcCCeE
Confidence 456666654433 4578899999999986 4677777665433 2232 233333333322211 2334
Q ss_pred EEEEecCCccCCCCCCCeeEEEEEecCC----HHHHHHHHHh
Q 009517 342 LVSFQSVSKGYYGECGKRGGYMEVTGFS----AEVREQIYKV 379 (533)
Q Consensus 342 vi~i~S~SK~~~gl~G~riG~v~~~~~~----~~~~~~l~~~ 379 (533)
++.......-.+ ++|..+++-. + +++...+.+.
T Consensus 80 ~l~~~~i~~R~F--~~W~M~~~~~---~~~~~~~~~~~~~~~ 116 (153)
T 2hfn_A 80 IIECMPIRRRNF--EVWSMQAITV---NDLSTEQVKTLVLKY 116 (153)
T ss_dssp EEEEEECSSCSS--TTCSCEEEEC---STTSCHHHHHHHHHT
T ss_pred EEEecccCCCcc--CCCcCeeecc---cccchhHHHHHHHhc
Confidence 555555555544 5999999976 5 5555555544
No 496
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=23.36 E-value=2.7e+02 Score=26.13 Aligned_cols=55 Identities=13% Similarity=-0.037 Sum_probs=28.3
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcC-CcCcchHHHHH----HhCCeEEEEecCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASIA----LHGGTLVPYYLDE 246 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~-p~~~~~~~~~~----~~g~~~~~v~~~~ 246 (533)
..+++|.|+...-..+.+.|. ..|-.|++.. -.-........ ..|.++..+..|-
T Consensus 47 k~~lVTGas~GIG~aia~~La-~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl 106 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 106 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeC
Confidence 345665555444455555665 5787777654 22222222221 3366677776654
No 497
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=23.33 E-value=2.2e+02 Score=25.67 Aligned_cols=87 Identities=13% Similarity=0.067 Sum_probs=48.9
Q ss_pred CEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 009517 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (533)
Q Consensus 192 ~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~~ 271 (533)
.|++|.|+.-.-..+++.|. ..|.+|.+..- ...+ -.|.+.++++++.. ++
T Consensus 7 ~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r------------------~~~D-----~~d~~~~~~~~~~~-----~~ 57 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELN-PEEYDIYPFDK------------------KLLD-----ITNISQVQQVVQEI-----RP 57 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSC-TTTEEEEEECT------------------TTSC-----TTCHHHHHHHHHHH-----CC
T ss_pred EEEEECCCCHHHHHHHHHHH-hCCCEEEEecc------------------cccC-----CCCHHHHHHHHHhc-----CC
Confidence 57777655555556666666 56767766554 0111 23788899988864 45
Q ss_pred eEEEEeCC-CCCCccCCCHHH--------HHHHHHHHHHcCCEEE
Q 009517 272 RALVVINP-GNPTGQVLAEEN--------QRAIVDFCKKEGLVLL 307 (533)
Q Consensus 272 ~~iil~~p-~NPtG~~~s~~~--------l~~i~~l~~~~~~~lI 307 (533)
.+||-+.. .++....-..+. ...+++.|+++++.+|
T Consensus 58 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v 102 (287)
T 3sc6_A 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLV 102 (287)
T ss_dssp SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred CEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 56654422 222111112222 3468888888876444
No 498
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=23.14 E-value=3.4e+02 Score=24.18 Aligned_cols=99 Identities=10% Similarity=0.030 Sum_probs=46.5
Q ss_pred CCEEEcCCh--HHHHHHHHHHhccCCCCeEEEcCCcCc---chHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009517 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (533)
Q Consensus 191 ~~i~~t~G~--~~al~~~~~~l~~~~gd~Vlv~~p~~~---~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~ 265 (533)
..+++|.|+ ...-..+.+.|. ..|.+|++..-.-. .........+. +..+..|- -|.+.+++.++...
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~-----~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAERLRPEAEKLAEALGG-ALLFRADV-----TQDEELDALFAGVK 81 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHH-HHTCEEEEEESCGGGHHHHHHHHHHTTC-CEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEECCC-----CCHHHHHHHHHHHH
Confidence 346666554 344444555555 46767766542211 11122222232 44555543 26777777776542
Q ss_pred hcCCCeeEEEEeCCC-CCC----c--cCCCHHHHHHHHH
Q 009517 266 AKGITVRALVVINPG-NPT----G--QVLAEENQRAIVD 297 (533)
Q Consensus 266 ~~g~~~~~iil~~p~-NPt----G--~~~s~~~l~~i~~ 297 (533)
+...+...+| ++.. .+. + ...+.+++++..+
T Consensus 82 ~~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (261)
T 2wyu_A 82 EAFGGLDYLV-HAIAFAPREAMEGRYIDTRRQDWLLALE 119 (261)
T ss_dssp HHHSSEEEEE-ECCCCCCHHHHSSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence 2222455444 4442 111 1 1356666666544
No 499
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=23.09 E-value=1.9e+02 Score=25.99 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=37.8
Q ss_pred CCEEEcCChHHHHHHHHHHhccCCCCeEEEcCCcCcchHHHHHHhCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009517 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (533)
Q Consensus 191 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ld~~~l~~~i~~~~~~g~~ 270 (533)
..+++|.|+...-..+.+.|. +.|.+|++..-.-.... . +..+..|- -|.+.+++.++.......+
T Consensus 22 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~------~--~~~~~~Dl-----~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFA-DAGDKVAITYRSGEPPE------G--FLAVKCDI-----TDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSSCCCT------T--SEEEECCT-----TSHHHHHHHHHHHHHHTCS
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChHhhc------c--ceEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666555544455556666 57877776542211111 1 33444442 2678888777664332334
Q ss_pred eeEEEEe
Q 009517 271 VRALVVI 277 (533)
Q Consensus 271 ~~~iil~ 277 (533)
...++-+
T Consensus 88 iD~lv~n 94 (253)
T 2nm0_A 88 VEVLIAN 94 (253)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 5555544
No 500
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=22.93 E-value=3.3e+02 Score=26.23 Aligned_cols=17 Identities=24% Similarity=0.264 Sum_probs=9.5
Q ss_pred HHHHccceEEEcCCCCC
Q 009517 478 RLLNATGIVLVPGSGFG 494 (533)
Q Consensus 478 ~ll~~~gV~v~pg~~f~ 494 (533)
.+..+.||.-..|++|.
T Consensus 292 ~~~~~~~~~~k~g~w~~ 308 (366)
T 1xp8_A 292 GLAADMDIIKKAGSFYS 308 (366)
T ss_dssp HHHHHTTSSEEETTEEE
T ss_pred HHHHHhCeeeccCceee
Confidence 34445666666666553
Done!