Query 009519
Match_columns 533
No_of_seqs 173 out of 1457
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 07:01:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009519.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009519hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 9E-191 3E-195 1518.9 36.6 479 31-530 2-481 (555)
2 1pj3_A NAD-dependent malic enz 100.0 6E-190 2E-194 1516.1 36.1 483 29-530 2-486 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 7E-190 2E-194 1520.1 34.1 487 22-530 29-518 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 1E-115 5E-120 923.3 27.5 346 106-531 44-399 (487)
5 2a9f_A Putative malic enzyme ( 100.0 3E-109 1E-113 865.1 21.2 339 106-532 19-362 (398)
6 1vl6_A Malate oxidoreductase; 100.0 4E-104 1E-108 825.3 22.0 332 106-526 23-360 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 3E-78 1E-82 640.0 22.7 334 111-529 21-366 (439)
8 3h9u_A Adenosylhomocysteinase; 99.0 1.7E-09 5.7E-14 114.9 11.5 164 254-459 132-311 (436)
9 3gvp_A Adenosylhomocysteinase 98.9 4.1E-09 1.4E-13 111.9 12.6 170 242-457 111-318 (435)
10 1x13_A NAD(P) transhydrogenase 98.7 3.6E-08 1.2E-12 103.0 8.7 227 155-447 25-295 (401)
11 3ond_A Adenosylhomocysteinase; 98.1 9E-06 3.1E-10 87.6 9.8 131 288-460 226-366 (488)
12 3n58_A Adenosylhomocysteinase; 98.1 1.6E-05 5.4E-10 85.1 11.3 128 288-457 208-345 (464)
13 1l7d_A Nicotinamide nucleotide 97.6 0.00072 2.5E-08 69.7 14.9 238 155-446 18-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.1 0.00012 4.1E-09 77.2 1.8 111 324-453 191-322 (405)
15 3d4o_A Dipicolinate synthase s 96.8 0.015 5.3E-07 57.4 13.3 141 279-458 107-256 (293)
16 3p2y_A Alanine dehydrogenase/p 96.7 0.00088 3E-08 70.2 3.9 105 324-447 185-305 (381)
17 3k92_A NAD-GDH, NAD-specific g 96.5 0.027 9.3E-07 59.8 13.5 185 242-448 125-330 (424)
18 4fcc_A Glutamate dehydrogenase 96.4 0.14 4.8E-06 54.8 18.5 185 241-448 139-355 (450)
19 1a4i_A Methylenetetrahydrofola 96.2 0.0066 2.3E-07 61.8 6.7 96 298-446 143-239 (301)
20 3r3j_A Glutamate dehydrogenase 96.1 0.12 4.1E-06 55.4 16.2 192 242-459 144-368 (456)
21 3aoe_E Glutamate dehydrogenase 96.1 0.058 2E-06 57.1 13.4 189 243-459 123-332 (419)
22 3l07_A Bifunctional protein fo 96.0 0.011 3.7E-07 59.8 7.0 91 301-444 142-233 (285)
23 3aog_A Glutamate dehydrogenase 95.9 0.064 2.2E-06 57.2 13.0 191 243-459 140-353 (440)
24 2yfq_A Padgh, NAD-GDH, NAD-spe 95.9 0.068 2.3E-06 56.6 12.8 183 243-447 116-326 (421)
25 3p2o_A Bifunctional protein fo 95.6 0.018 6.2E-07 58.2 7.0 95 300-447 140-236 (285)
26 4a5o_A Bifunctional protein fo 95.5 0.02 6.7E-07 58.0 6.8 106 301-459 142-253 (286)
27 3ngx_A Bifunctional protein fo 95.5 0.017 5.9E-07 58.1 6.4 137 253-444 70-222 (276)
28 1b0a_A Protein (fold bifunctio 95.5 0.016 5.4E-07 58.8 5.9 96 298-446 137-233 (288)
29 4a26_A Putative C-1-tetrahydro 95.2 0.023 7.9E-07 57.8 6.1 95 297-444 142-239 (300)
30 1v8b_A Adenosylhomocysteinase; 95.1 0.096 3.3E-06 56.4 11.0 124 294-459 234-357 (479)
31 2bma_A Glutamate dehydrogenase 95.1 0.22 7.4E-06 53.6 13.6 182 243-448 158-373 (470)
32 1edz_A 5,10-methylenetetrahydr 94.9 0.017 5.9E-07 59.1 4.4 114 303-447 151-278 (320)
33 1c1d_A L-phenylalanine dehydro 94.7 0.58 2E-05 48.5 15.2 167 243-448 90-266 (355)
34 2rir_A Dipicolinate synthase, 94.4 0.11 3.8E-06 51.3 8.6 110 311-457 148-257 (300)
35 2c2x_A Methylenetetrahydrofola 94.3 0.044 1.5E-06 55.3 5.6 144 253-447 76-235 (281)
36 2tmg_A Protein (glutamate dehy 94.2 0.54 1.8E-05 49.8 13.8 184 243-448 114-320 (415)
37 3ce6_A Adenosylhomocysteinase; 94.0 0.25 8.5E-06 53.3 10.8 109 312-459 266-374 (494)
38 3d64_A Adenosylhomocysteinase; 93.9 0.11 3.9E-06 56.0 8.1 111 298-448 258-368 (494)
39 2o4c_A Erythronate-4-phosphate 93.9 0.49 1.7E-05 49.3 12.6 141 263-446 56-209 (380)
40 1pzg_A LDH, lactate dehydrogen 93.7 0.049 1.7E-06 55.2 4.6 126 324-470 10-157 (331)
41 3tri_A Pyrroline-5-carboxylate 93.7 0.26 8.9E-06 48.4 9.7 124 323-479 3-128 (280)
42 1pjc_A Protein (L-alanine dehy 93.6 0.1 3.5E-06 53.2 6.8 100 321-446 165-269 (361)
43 1gpj_A Glutamyl-tRNA reductase 93.6 0.37 1.3E-05 49.8 11.1 137 276-447 128-269 (404)
44 2ekl_A D-3-phosphoglycerate de 93.1 1.2 4.1E-05 44.7 13.6 192 262-500 65-286 (313)
45 1bgv_A Glutamate dehydrogenase 93.1 2.7 9.2E-05 44.9 16.8 186 244-448 136-351 (449)
46 3fbt_A Chorismate mutase and s 92.9 0.11 3.6E-06 52.1 5.5 158 305-529 107-275 (282)
47 3jyo_A Quinate/shikimate dehyd 92.9 0.12 4E-06 51.5 5.7 92 304-418 111-204 (283)
48 3dtt_A NADP oxidoreductase; st 92.8 0.18 6.1E-06 48.3 6.7 106 321-447 17-127 (245)
49 3tnl_A Shikimate dehydrogenase 92.8 0.13 4.4E-06 52.3 5.9 50 304-367 138-187 (315)
50 1gtm_A Glutamate dehydrogenase 92.8 0.52 1.8E-05 49.7 10.7 114 243-371 114-250 (419)
51 2eez_A Alanine dehydrogenase; 92.7 0.33 1.1E-05 49.5 8.9 101 320-446 163-268 (369)
52 3t4e_A Quinate/shikimate dehyd 92.7 0.13 4.3E-06 52.3 5.8 49 305-367 133-181 (312)
53 3u62_A Shikimate dehydrogenase 92.6 0.23 7.8E-06 48.7 7.3 145 251-445 41-201 (253)
54 3tum_A Shikimate dehydrogenase 92.4 0.14 4.7E-06 50.9 5.6 48 305-366 110-157 (269)
55 3o8q_A Shikimate 5-dehydrogena 92.4 0.12 4.2E-06 51.4 5.2 99 252-367 50-159 (281)
56 3oet_A Erythronate-4-phosphate 92.3 0.64 2.2E-05 48.6 10.6 137 288-467 84-231 (381)
57 1leh_A Leucine dehydrogenase; 92.3 0.28 9.5E-06 50.8 7.8 159 249-447 93-264 (364)
58 3mw9_A GDH 1, glutamate dehydr 92.1 0.96 3.3E-05 49.0 12.0 185 242-447 135-352 (501)
59 1lu9_A Methylene tetrahydromet 92.1 0.63 2.2E-05 45.4 9.8 85 267-367 61-152 (287)
60 2rcy_A Pyrroline carboxylate r 92.1 0.75 2.5E-05 43.5 10.0 91 324-448 5-95 (262)
61 4e21_A 6-phosphogluconate dehy 92.1 0.39 1.3E-05 49.3 8.5 96 324-448 23-119 (358)
62 3pwz_A Shikimate dehydrogenase 92.0 0.12 4.2E-06 51.2 4.6 99 252-367 44-153 (272)
63 3k5p_A D-3-phosphoglycerate de 92.0 1.5 5.3E-05 46.2 13.2 217 263-526 78-321 (416)
64 3u95_A Glycoside hydrolase, fa 92.0 0.11 3.8E-06 55.5 4.6 39 424-466 140-178 (477)
65 3don_A Shikimate dehydrogenase 92.0 0.082 2.8E-06 52.7 3.3 111 305-448 102-215 (277)
66 1x0v_A GPD-C, GPDH-C, glycerol 91.9 0.42 1.4E-05 47.4 8.4 115 324-448 9-128 (354)
67 1u8x_X Maltose-6'-phosphate gl 91.4 0.058 2E-06 57.7 1.7 130 324-470 29-194 (472)
68 1obb_A Maltase, alpha-glucosid 91.4 0.079 2.7E-06 56.9 2.6 129 323-470 3-174 (480)
69 2gcg_A Glyoxylate reductase/hy 91.4 1.4 4.7E-05 44.4 11.6 216 264-529 75-322 (330)
70 1wwk_A Phosphoglycerate dehydr 91.4 1.4 4.9E-05 44.0 11.6 150 262-447 63-235 (307)
71 2zyd_A 6-phosphogluconate dehy 91.3 0.34 1.2E-05 51.6 7.4 102 323-448 15-117 (480)
72 1v9l_A Glutamate dehydrogenase 91.3 0.56 1.9E-05 49.7 8.9 183 243-448 115-326 (421)
73 1t2d_A LDH-P, L-lactate dehydr 91.3 0.062 2.1E-06 54.3 1.6 129 324-474 5-155 (322)
74 2izz_A Pyrroline-5-carboxylate 91.3 0.67 2.3E-05 46.1 9.1 101 324-449 23-123 (322)
75 2v6b_A L-LDH, L-lactate dehydr 91.3 0.12 4.1E-06 51.5 3.7 125 325-472 2-141 (304)
76 3h8v_A Ubiquitin-like modifier 91.1 0.11 3.9E-06 52.3 3.3 74 321-413 34-107 (292)
77 1s6y_A 6-phospho-beta-glucosid 91.1 0.073 2.5E-06 56.6 1.9 131 324-470 8-175 (450)
78 2hjr_A Malate dehydrogenase; m 91.0 0.067 2.3E-06 54.1 1.5 129 324-474 15-160 (328)
79 2dbq_A Glyoxylate reductase; D 90.9 2.5 8.6E-05 42.6 13.0 147 262-445 64-241 (334)
80 2egg_A AROE, shikimate 5-dehyd 90.8 0.24 8.1E-06 49.3 5.2 89 305-418 125-214 (297)
81 1nyt_A Shikimate 5-dehydrogena 90.8 0.26 9E-06 48.0 5.4 49 304-367 103-151 (271)
82 2j6i_A Formate dehydrogenase; 90.7 1.5 5.1E-05 45.1 11.3 169 261-466 80-277 (364)
83 1txg_A Glycerol-3-phosphate de 90.7 0.45 1.5E-05 46.5 7.1 100 325-447 2-107 (335)
84 3kkj_A Amine oxidase, flavin-c 90.6 0.14 4.6E-06 44.7 2.9 32 324-367 3-34 (336)
85 1mld_A Malate dehydrogenase; o 90.3 0.5 1.7E-05 47.4 7.2 102 325-448 2-121 (314)
86 3oj0_A Glutr, glutamyl-tRNA re 90.3 0.15 5.1E-06 44.5 3.0 91 324-447 22-113 (144)
87 1p77_A Shikimate 5-dehydrogena 90.3 0.23 7.9E-06 48.5 4.6 49 304-367 103-151 (272)
88 3i83_A 2-dehydropantoate 2-red 90.2 0.28 9.7E-06 48.6 5.2 99 324-448 3-109 (320)
89 2hk9_A Shikimate dehydrogenase 90.1 0.33 1.1E-05 47.4 5.6 107 305-445 114-222 (275)
90 3rui_A Ubiquitin-like modifier 90.0 0.13 4.6E-06 53.0 2.7 35 322-367 33-67 (340)
91 3gt0_A Pyrroline-5-carboxylate 89.9 0.93 3.2E-05 43.0 8.4 98 324-448 3-101 (247)
92 3k96_A Glycerol-3-phosphate de 89.9 0.82 2.8E-05 46.7 8.5 105 324-448 30-137 (356)
93 2ewd_A Lactate dehydrogenase,; 89.9 0.15 5.1E-06 50.8 2.9 102 324-449 5-126 (317)
94 3ado_A Lambda-crystallin; L-gu 89.9 0.27 9.2E-06 50.1 4.8 31 324-366 7-37 (319)
95 1f0y_A HCDH, L-3-hydroxyacyl-C 89.7 0.19 6.5E-06 49.3 3.5 32 324-367 16-47 (302)
96 1yj8_A Glycerol-3-phosphate de 89.5 0.48 1.6E-05 48.0 6.3 114 324-448 22-145 (375)
97 3fef_A Putative glucosidase LP 89.5 0.32 1.1E-05 51.8 5.2 107 323-448 5-150 (450)
98 2vhw_A Alanine dehydrogenase; 89.5 0.37 1.3E-05 49.5 5.5 99 320-444 165-268 (377)
99 1sc6_A PGDH, D-3-phosphoglycer 89.5 4.4 0.00015 42.3 13.8 162 263-465 67-252 (404)
100 1hyh_A L-hicdh, L-2-hydroxyiso 89.4 0.38 1.3E-05 47.7 5.3 103 324-448 2-126 (309)
101 2p4q_A 6-phosphogluconate dehy 89.2 0.84 2.9E-05 48.9 8.2 101 324-448 11-113 (497)
102 4e12_A Diketoreductase; oxidor 89.2 0.37 1.3E-05 47.0 5.0 32 324-367 5-36 (283)
103 1up7_A 6-phospho-beta-glucosid 89.1 0.42 1.4E-05 50.3 5.7 126 324-470 3-164 (417)
104 2h78_A Hibadh, 3-hydroxyisobut 89.1 0.45 1.5E-05 46.3 5.6 95 324-448 4-101 (302)
105 2g1u_A Hypothetical protein TM 89.0 0.4 1.4E-05 42.2 4.7 32 324-367 20-51 (155)
106 1bg6_A N-(1-D-carboxylethyl)-L 88.8 0.64 2.2E-05 45.8 6.5 100 324-445 5-110 (359)
107 3qsg_A NAD-binding phosphogluc 88.6 1.2 4E-05 44.2 8.3 33 324-367 25-57 (312)
108 3ba1_A HPPR, hydroxyphenylpyru 88.5 2.1 7.2E-05 43.5 10.2 157 320-529 161-326 (333)
109 3jtm_A Formate dehydrogenase, 88.4 2 6.9E-05 44.1 10.1 202 263-505 84-313 (351)
110 1ks9_A KPA reductase;, 2-dehyd 88.0 0.76 2.6E-05 43.7 6.3 100 325-448 2-101 (291)
111 1mx3_A CTBP1, C-terminal bindi 88.0 4.9 0.00017 41.1 12.6 219 261-527 81-334 (347)
112 2iz1_A 6-phosphogluconate dehy 87.9 0.95 3.2E-05 47.9 7.5 101 324-448 6-107 (474)
113 3d1l_A Putative NADP oxidoredu 87.7 0.59 2E-05 44.5 5.3 97 324-449 11-107 (266)
114 2raf_A Putative dinucleotide-b 87.7 1 3.4E-05 42.1 6.7 33 323-367 19-51 (209)
115 4gsl_A Ubiquitin-like modifier 87.6 0.27 9.1E-06 54.5 3.1 34 324-368 327-360 (615)
116 1oju_A MDH, malate dehydrogena 87.5 0.34 1.2E-05 48.6 3.6 125 325-470 2-143 (294)
117 3pef_A 6-phosphogluconate dehy 87.5 0.58 2E-05 45.4 5.2 32 324-367 2-33 (287)
118 4huj_A Uncharacterized protein 87.5 0.47 1.6E-05 44.6 4.4 93 324-448 24-117 (220)
119 1x7d_A Ornithine cyclodeaminas 87.5 1.5 5.1E-05 44.9 8.4 118 306-456 117-239 (350)
120 3b1f_A Putative prephenate deh 87.4 0.58 2E-05 45.2 5.1 97 324-447 7-104 (290)
121 4fgw_A Glycerol-3-phosphate de 87.3 0.93 3.2E-05 47.5 6.9 106 324-444 35-151 (391)
122 2zqz_A L-LDH, L-lactate dehydr 87.1 0.73 2.5E-05 46.6 5.8 126 324-472 10-152 (326)
123 2pgd_A 6-phosphogluconate dehy 87.0 1 3.5E-05 47.7 7.1 101 324-448 3-105 (482)
124 3gvi_A Malate dehydrogenase; N 86.9 0.32 1.1E-05 49.5 3.1 125 324-470 8-149 (324)
125 1ez4_A Lactate dehydrogenase; 86.9 0.83 2.8E-05 46.0 6.1 127 324-473 6-149 (318)
126 1y6j_A L-lactate dehydrogenase 86.8 2.2 7.7E-05 42.7 9.2 123 324-471 8-149 (318)
127 2ew2_A 2-dehydropantoate 2-red 86.8 0.31 1E-05 46.9 2.7 108 324-448 4-112 (316)
128 4gwg_A 6-phosphogluconate dehy 86.8 1.5 5.2E-05 47.0 8.4 102 324-448 5-107 (484)
129 1jw9_B Molybdopterin biosynthe 86.7 0.29 9.8E-06 47.5 2.5 34 324-368 32-65 (249)
130 3ghy_A Ketopantoate reductase 86.7 0.45 1.5E-05 47.4 4.0 101 324-447 4-107 (335)
131 3doj_A AT3G25530, dehydrogenas 86.6 0.87 3E-05 45.0 6.0 32 324-367 22-53 (310)
132 1zud_1 Adenylyltransferase THI 86.4 0.28 9.4E-06 47.7 2.2 33 324-367 29-61 (251)
133 1npy_A Hypothetical shikimate 86.0 0.66 2.3E-05 45.8 4.7 47 305-366 105-151 (271)
134 3ggo_A Prephenate dehydrogenas 86.0 1.2 4E-05 44.6 6.6 94 324-444 34-128 (314)
135 3vh1_A Ubiquitin-like modifier 85.9 0.32 1.1E-05 53.7 2.6 37 317-367 324-360 (598)
136 1o6z_A MDH, malate dehydrogena 85.8 0.83 2.8E-05 45.5 5.4 124 325-471 2-145 (303)
137 1a5z_A L-lactate dehydrogenase 85.7 0.73 2.5E-05 46.1 4.9 124 325-471 2-142 (319)
138 4g2n_A D-isomer specific 2-hyd 85.6 6 0.0002 40.5 11.8 197 288-530 117-339 (345)
139 3hn2_A 2-dehydropantoate 2-red 85.6 0.57 1.9E-05 46.3 4.0 104 324-448 3-107 (312)
140 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.6 1 3.5E-05 47.8 6.2 104 324-448 2-107 (478)
141 3h5n_A MCCB protein; ubiquitin 85.4 0.45 1.5E-05 48.7 3.3 34 324-368 119-152 (353)
142 1hyu_A AHPF, alkyl hydroperoxi 85.3 0.31 1.1E-05 51.7 2.1 103 250-366 133-243 (521)
143 3cky_A 2-hydroxymethyl glutara 85.3 0.96 3.3E-05 43.7 5.4 94 324-447 5-101 (301)
144 3pdu_A 3-hydroxyisobutyrate de 85.2 0.8 2.7E-05 44.4 4.8 32 324-367 2-33 (287)
145 2g76_A 3-PGDH, D-3-phosphoglyc 85.2 8 0.00027 39.3 12.4 218 262-530 86-331 (335)
146 3gvx_A Glycerate dehydrogenase 85.0 3.7 0.00013 41.0 9.7 160 319-527 118-281 (290)
147 1nvt_A Shikimate 5'-dehydrogen 84.9 0.87 3E-05 44.6 5.0 49 303-367 111-159 (287)
148 4dll_A 2-hydroxy-3-oxopropiona 84.8 0.94 3.2E-05 45.0 5.2 31 324-366 32-62 (320)
149 3ldh_A Lactate dehydrogenase; 84.6 0.26 8.9E-06 50.5 1.1 126 324-472 22-165 (330)
150 1xdw_A NAD+-dependent (R)-2-hy 84.6 3.2 0.00011 41.9 9.1 142 267-447 72-237 (331)
151 2d0i_A Dehydrogenase; structur 84.6 2.9 0.0001 42.2 8.8 90 320-445 143-236 (333)
152 1vpd_A Tartronate semialdehyde 84.5 0.79 2.7E-05 44.2 4.4 32 324-367 6-37 (299)
153 3c24_A Putative oxidoreductase 84.5 0.92 3.2E-05 43.9 4.9 93 324-448 12-105 (286)
154 2i99_A MU-crystallin homolog; 84.5 2.3 7.8E-05 42.3 7.8 102 324-459 136-241 (312)
155 4hy3_A Phosphoglycerate oxidor 84.4 2.4 8.1E-05 43.9 8.2 187 298-530 133-342 (365)
156 2i6t_A Ubiquitin-conjugating e 84.2 1.8 6.3E-05 43.3 7.1 121 324-471 15-151 (303)
157 1smk_A Malate dehydrogenase, g 84.2 0.79 2.7E-05 46.2 4.4 104 324-448 9-129 (326)
158 1j4a_A D-LDH, D-lactate dehydr 84.2 5.1 0.00017 40.4 10.4 198 288-529 93-324 (333)
159 1b8p_A Protein (malate dehydro 84.1 1.2 4E-05 44.8 5.6 111 324-448 6-137 (329)
160 3gg9_A D-3-phosphoglycerate de 83.9 3.6 0.00012 42.1 9.3 200 288-530 98-328 (352)
161 2cuk_A Glycerate dehydrogenase 83.9 4 0.00014 40.9 9.4 186 289-529 89-304 (311)
162 1y8q_A Ubiquitin-like 1 activa 83.7 0.56 1.9E-05 47.9 3.1 33 324-367 37-69 (346)
163 3pp8_A Glyoxylate/hydroxypyruv 83.7 4.4 0.00015 40.8 9.7 221 264-530 58-304 (315)
164 2yq5_A D-isomer specific 2-hyd 83.5 7.2 0.00025 39.9 11.2 198 289-530 94-326 (343)
165 2dpo_A L-gulonate 3-dehydrogen 83.3 1.7 5.7E-05 43.9 6.3 32 324-367 7-38 (319)
166 2nac_A NAD-dependent formate d 83.2 2.6 9E-05 44.0 8.0 195 288-527 136-357 (393)
167 2xxj_A L-LDH, L-lactate dehydr 83.2 0.97 3.3E-05 45.3 4.5 127 325-474 2-145 (310)
168 4dgs_A Dehydrogenase; structur 83.2 6.4 0.00022 40.2 10.7 194 289-530 117-334 (340)
169 2uyy_A N-PAC protein; long-cha 83.0 1.4 4.7E-05 43.2 5.5 94 324-447 31-127 (316)
170 2pi1_A D-lactate dehydrogenase 82.9 5.7 0.00019 40.3 10.2 162 262-466 61-250 (334)
171 2cvz_A Dehydrogenase, 3-hydrox 82.9 0.76 2.6E-05 43.9 3.5 30 325-367 3-32 (289)
172 3qha_A Putative oxidoreductase 82.9 1.5 5.1E-05 43.0 5.6 32 324-367 16-47 (296)
173 1ldn_A L-lactate dehydrogenase 82.8 0.6 2E-05 46.8 2.8 126 324-471 7-149 (316)
174 3g0o_A 3-hydroxyisobutyrate de 82.8 0.64 2.2E-05 45.6 3.0 32 324-367 8-39 (303)
175 1dxy_A D-2-hydroxyisocaproate 82.7 6.4 0.00022 39.8 10.4 140 288-466 91-253 (333)
176 3vrd_B FCCB subunit, flavocyto 82.6 1.1 3.9E-05 44.7 4.8 35 323-367 2-36 (401)
177 3hg7_A D-isomer specific 2-hyd 82.5 4.5 0.00015 41.1 9.2 186 299-530 103-305 (324)
178 3vku_A L-LDH, L-lactate dehydr 82.5 2 6.8E-05 43.8 6.6 126 324-472 10-152 (326)
179 1ur5_A Malate dehydrogenase; o 82.4 0.52 1.8E-05 47.0 2.2 124 324-472 3-146 (309)
180 2z2v_A Hypothetical protein PH 82.2 0.93 3.2E-05 46.5 4.1 122 323-476 16-137 (365)
181 2qrj_A Saccharopine dehydrogen 82.2 2.5 8.5E-05 44.5 7.3 81 324-444 215-300 (394)
182 2d4a_B Malate dehydrogenase; a 82.1 0.58 2E-05 46.9 2.4 120 325-471 1-142 (308)
183 2g5c_A Prephenate dehydrogenas 82.0 1.7 5.9E-05 41.6 5.7 98 324-448 2-100 (281)
184 4hb9_A Similarities with proba 82.0 0.76 2.6E-05 45.1 3.2 32 324-367 2-33 (412)
185 3evt_A Phosphoglycerate dehydr 81.8 5.3 0.00018 40.5 9.4 220 261-526 57-300 (324)
186 1guz_A Malate dehydrogenase; o 81.6 0.61 2.1E-05 46.4 2.4 103 325-448 2-122 (310)
187 2f1k_A Prephenate dehydrogenas 81.6 1.6 5.6E-05 41.6 5.3 31 325-367 2-32 (279)
188 2w2k_A D-mandelate dehydrogena 81.4 6.4 0.00022 39.9 9.9 163 320-525 160-327 (348)
189 2d5c_A AROE, shikimate 5-dehyd 81.4 1.5 5.3E-05 42.1 5.0 104 305-445 102-207 (263)
190 1yb4_A Tartronic semialdehyde 81.3 1.6 5.6E-05 41.8 5.2 21 324-344 4-24 (295)
191 1hdo_A Biliverdin IX beta redu 81.2 3.2 0.00011 36.7 6.8 98 324-444 4-111 (206)
192 3pdi_B Nitrogenase MOFE cofact 80.9 1.7 5.7E-05 46.1 5.5 196 149-440 177-397 (458)
193 3k6j_A Protein F01G10.3, confi 80.7 1.5 5.2E-05 46.8 5.2 36 485-520 232-267 (460)
194 3fi9_A Malate dehydrogenase; s 80.2 1.6 5.4E-05 44.8 4.9 118 321-461 6-140 (343)
195 3d0o_A L-LDH 1, L-lactate dehy 80.1 1.4 4.8E-05 44.2 4.4 127 324-472 7-150 (317)
196 2qyt_A 2-dehydropantoate 2-red 80.0 1.4 4.7E-05 42.6 4.2 111 324-448 9-121 (317)
197 3d1c_A Flavin-containing putat 79.9 0.99 3.4E-05 44.0 3.1 34 324-368 5-38 (369)
198 4b4u_A Bifunctional protein fo 79.9 3.2 0.00011 42.3 7.0 83 300-428 159-242 (303)
199 3phh_A Shikimate dehydrogenase 79.5 0.99 3.4E-05 44.9 3.0 99 306-446 108-212 (269)
200 3fbs_A Oxidoreductase; structu 79.4 1.1 3.8E-05 41.9 3.3 32 324-367 3-34 (297)
201 4a9w_A Monooxygenase; baeyer-v 79.3 0.81 2.8E-05 43.8 2.3 33 324-368 4-36 (357)
202 3hwr_A 2-dehydropantoate 2-red 79.1 0.63 2.1E-05 46.2 1.5 106 323-449 19-125 (318)
203 1tt5_B Ubiquitin-activating en 78.9 0.79 2.7E-05 48.5 2.2 33 324-367 41-73 (434)
204 3ip1_A Alcohol dehydrogenase, 78.8 8 0.00027 39.3 9.6 83 324-430 215-304 (404)
205 3l6d_A Putative oxidoreductase 78.8 1.7 5.7E-05 42.9 4.4 32 324-367 10-41 (306)
206 4e5n_A Thermostable phosphite 78.7 3.4 0.00012 41.8 6.8 222 264-529 66-319 (330)
207 3hdj_A Probable ornithine cycl 78.6 13 0.00045 37.3 11.0 103 324-458 122-228 (313)
208 3f8d_A Thioredoxin reductase ( 78.2 1.3 4.4E-05 41.9 3.3 32 324-367 16-47 (323)
209 1qp8_A Formate dehydrogenase; 78.1 11 0.00037 37.7 10.1 143 262-445 47-211 (303)
210 3tl2_A Malate dehydrogenase; c 77.7 0.79 2.7E-05 46.3 1.8 126 324-471 9-153 (315)
211 2pv7_A T-protein [includes: ch 77.6 4.2 0.00014 39.8 6.9 32 324-367 22-54 (298)
212 3p7m_A Malate dehydrogenase; p 77.3 0.83 2.8E-05 46.2 1.8 125 323-470 5-147 (321)
213 2zbw_A Thioredoxin reductase; 77.0 1.4 4.8E-05 42.4 3.3 33 324-368 6-38 (335)
214 4ezb_A Uncharacterized conserv 77.0 2.7 9.2E-05 41.8 5.4 33 324-367 25-57 (317)
215 3lzw_A Ferredoxin--NADP reduct 76.7 1.4 4.7E-05 42.0 3.1 32 324-367 8-39 (332)
216 3kb6_A D-lactate dehydrogenase 76.7 10 0.00034 38.5 9.6 121 289-445 88-231 (334)
217 3iwa_A FAD-dependent pyridine 76.5 1.5 5.2E-05 45.3 3.5 36 324-369 4-39 (472)
218 4a7p_A UDP-glucose dehydrogena 76.5 2.9 9.8E-05 44.3 5.7 33 323-367 8-40 (446)
219 3oz2_A Digeranylgeranylglycero 76.5 1.3 4.5E-05 42.9 2.9 31 325-367 6-36 (397)
220 3m6i_A L-arabinitol 4-dehydrog 76.4 3.2 0.00011 41.3 5.8 58 294-366 155-212 (363)
221 4ej6_A Putative zinc-binding d 76.2 4.8 0.00016 40.5 7.1 142 294-469 158-309 (370)
222 2hmt_A YUAA protein; RCK, KTN, 76.0 1.4 4.7E-05 37.0 2.6 32 324-367 7-38 (144)
223 1np3_A Ketol-acid reductoisome 76.0 2.1 7.3E-05 43.0 4.3 87 324-441 17-104 (338)
224 1y8q_B Anthracycline-, ubiquit 75.9 1.2 4E-05 49.6 2.7 33 324-367 18-50 (640)
225 3itj_A Thioredoxin reductase 1 75.7 1.2 4E-05 42.6 2.2 32 324-367 23-54 (338)
226 4egb_A DTDP-glucose 4,6-dehydr 75.7 5.8 0.0002 38.4 7.3 104 324-444 25-149 (346)
227 3h8l_A NADH oxidase; membrane 75.7 1.8 6.1E-05 43.6 3.7 36 324-368 2-37 (409)
228 3rp8_A Flavoprotein monooxygen 75.6 1.7 5.8E-05 43.5 3.5 34 323-368 23-56 (407)
229 2gf2_A Hibadh, 3-hydroxyisobut 75.5 3.4 0.00012 39.7 5.5 31 325-367 2-32 (296)
230 2ywl_A Thioredoxin reductase r 75.4 1.8 6.2E-05 38.2 3.3 32 324-367 2-33 (180)
231 1pl8_A Human sorbitol dehydrog 74.8 4.2 0.00014 40.5 6.2 49 303-366 156-204 (356)
232 3abi_A Putative uncharacterize 74.8 2.8 9.6E-05 42.3 4.9 120 324-475 17-136 (365)
233 1id1_A Putative potassium chan 74.6 2.1 7.2E-05 37.3 3.5 33 323-367 3-35 (153)
234 3fwz_A Inner membrane protein 74.6 2.3 8E-05 36.7 3.7 32 324-367 8-39 (140)
235 2xdo_A TETX2 protein; tetracyc 74.5 1.7 6E-05 43.5 3.3 33 324-368 27-59 (398)
236 3llv_A Exopolyphosphatase-rela 74.5 2 6.7E-05 36.8 3.1 32 324-367 7-38 (141)
237 3hyw_A Sulfide-quinone reducta 74.4 1.9 6.6E-05 44.2 3.6 34 324-367 3-36 (430)
238 3cgv_A Geranylgeranyl reductas 74.4 1.3 4.5E-05 43.5 2.3 34 324-369 5-38 (397)
239 3fg2_P Putative rubredoxin red 74.4 1.8 6E-05 43.8 3.3 35 324-368 2-36 (404)
240 3c85_A Putative glutathione-re 74.3 2.3 7.9E-05 38.0 3.7 34 323-367 39-72 (183)
241 2jae_A L-amino acid oxidase; o 74.2 1.8 6E-05 44.6 3.3 34 324-369 12-45 (489)
242 3alj_A 2-methyl-3-hydroxypyrid 74.1 1.9 6.4E-05 42.9 3.4 34 324-369 12-45 (379)
243 2q7v_A Thioredoxin reductase; 74.0 1.9 6.5E-05 41.5 3.3 32 324-367 9-40 (325)
244 3nep_X Malate dehydrogenase; h 74.0 1.8 6.1E-05 43.8 3.2 125 325-470 2-143 (314)
245 1ryi_A Glycine oxidase; flavop 73.9 1.8 6.2E-05 42.5 3.1 34 324-369 18-51 (382)
246 3axb_A Putative oxidoreductase 73.8 2.7 9.3E-05 42.6 4.5 32 324-366 24-55 (448)
247 3dme_A Conserved exported prot 73.7 2 6.7E-05 41.5 3.3 32 324-367 5-36 (369)
248 1yvv_A Amine oxidase, flavin-c 73.6 1.8 6.3E-05 41.5 3.1 33 324-368 3-35 (336)
249 3c7a_A Octopine dehydrogenase; 73.6 5 0.00017 40.7 6.4 104 324-445 3-117 (404)
250 3r9u_A Thioredoxin reductase; 73.5 1.9 6.5E-05 40.7 3.1 32 324-367 5-37 (315)
251 3ic5_A Putative saccharopine d 73.4 2 6.8E-05 34.8 2.8 83 324-432 6-91 (118)
252 1hye_A L-lactate/malate dehydr 73.4 3 0.0001 41.5 4.7 129 325-473 2-150 (313)
253 1y56_B Sarcosine oxidase; dehy 73.2 1.9 6.3E-05 42.5 3.0 33 324-368 6-38 (382)
254 4eez_A Alcohol dehydrogenase 1 73.1 5.9 0.0002 38.9 6.7 48 304-366 149-196 (348)
255 3kd9_A Coenzyme A disulfide re 73.1 2.5 8.5E-05 43.4 4.1 36 323-368 3-38 (449)
256 1pqw_A Polyketide synthase; ro 73.1 6.8 0.00023 35.2 6.6 57 295-366 13-71 (198)
257 4aj2_A L-lactate dehydrogenase 73.0 2 6.9E-05 43.8 3.3 128 324-474 20-165 (331)
258 3cty_A Thioredoxin reductase; 72.9 2.1 7.1E-05 41.1 3.3 32 324-367 17-48 (319)
259 2vou_A 2,6-dihydroxypyridine h 72.8 2.3 7.7E-05 42.7 3.6 33 324-368 6-38 (397)
260 3s5w_A L-ornithine 5-monooxyge 72.7 2.5 8.6E-05 43.1 4.0 39 324-369 31-69 (463)
261 3gg2_A Sugar dehydrogenase, UD 72.6 6 0.00021 41.6 6.9 32 324-367 3-34 (450)
262 1lss_A TRK system potassium up 72.5 2.6 8.7E-05 35.2 3.3 32 324-367 5-36 (140)
263 3ab1_A Ferredoxin--NADP reduct 72.5 2.1 7.3E-05 41.8 3.3 33 324-368 15-47 (360)
264 1c0p_A D-amino acid oxidase; a 72.4 2.6 8.9E-05 41.4 3.9 33 324-368 7-39 (363)
265 2gf3_A MSOX, monomeric sarcosi 72.4 2.1 7.1E-05 42.0 3.2 35 324-370 4-38 (389)
266 3c96_A Flavin-containing monoo 72.2 2.2 7.6E-05 42.9 3.4 34 324-368 5-38 (410)
267 2vdc_G Glutamate synthase [NAD 71.8 2.4 8.3E-05 44.4 3.7 32 324-367 123-154 (456)
268 2uzz_A N-methyl-L-tryptophan o 71.8 2 7E-05 41.9 2.9 35 324-370 3-37 (372)
269 3k7m_X 6-hydroxy-L-nicotine ox 71.8 2.3 7.8E-05 42.7 3.3 32 324-367 2-33 (431)
270 1ygy_A PGDH, D-3-phosphoglycer 71.4 24 0.00081 37.8 11.4 148 262-445 63-233 (529)
271 3pqe_A L-LDH, L-lactate dehydr 71.2 2.4 8.3E-05 43.0 3.4 129 324-474 6-151 (326)
272 2gag_B Heterotetrameric sarcos 71.1 2.3 7.9E-05 41.9 3.2 35 324-368 22-56 (405)
273 3nix_A Flavoprotein/dehydrogen 71.0 1.9 6.5E-05 43.0 2.6 33 324-368 6-38 (421)
274 2x3n_A Probable FAD-dependent 70.9 2.3 7.7E-05 42.4 3.1 33 324-368 7-39 (399)
275 2oln_A NIKD protein; flavoprot 70.9 2.5 8.7E-05 41.9 3.4 35 324-370 5-39 (397)
276 2gqw_A Ferredoxin reductase; f 70.9 2.9 0.0001 42.5 4.0 37 324-370 8-44 (408)
277 2x0j_A Malate dehydrogenase; o 70.8 4.6 0.00016 40.5 5.3 115 325-460 2-131 (294)
278 4g6h_A Rotenone-insensitive NA 70.5 1.5 5E-05 46.6 1.7 32 324-367 43-74 (502)
279 1zk7_A HGII, reductase, mercur 70.5 2.7 9.3E-05 43.3 3.7 32 324-367 5-36 (467)
280 4a2c_A Galactitol-1-phosphate 70.4 8.3 0.00029 37.8 7.0 56 296-366 138-193 (346)
281 3ics_A Coenzyme A-disulfide re 70.3 2.9 0.0001 44.5 4.0 36 324-369 37-72 (588)
282 2cul_A Glucose-inhibited divis 70.3 2.7 9.1E-05 39.3 3.3 32 324-367 4-35 (232)
283 1lqt_A FPRA; NADP+ derivative, 70.3 2.7 9.4E-05 43.9 3.7 38 323-367 3-42 (456)
284 3ef6_A Toluene 1,2-dioxygenase 70.2 4.3 0.00015 41.2 5.0 36 324-369 3-38 (410)
285 1k0i_A P-hydroxybenzoate hydro 70.1 2.7 9.2E-05 41.7 3.4 33 324-368 3-35 (394)
286 2nvu_B Maltose binding protein 70.0 1.5 5.2E-05 49.0 1.7 36 322-368 410-445 (805)
287 3c4a_A Probable tryptophan hyd 69.9 3 0.0001 41.6 3.8 34 325-368 2-35 (381)
288 3i6d_A Protoporphyrinogen oxid 69.8 3.4 0.00012 41.5 4.2 23 324-346 6-28 (470)
289 1y7t_A Malate dehydrogenase; N 69.6 2.2 7.5E-05 42.4 2.7 110 324-447 5-133 (327)
290 3g3e_A D-amino-acid oxidase; F 69.6 3.9 0.00013 39.9 4.4 38 325-368 2-39 (351)
291 3lxd_A FAD-dependent pyridine 69.4 4 0.00014 41.2 4.6 35 324-368 10-44 (415)
292 2weu_A Tryptophan 5-halogenase 69.4 2.8 9.7E-05 43.5 3.5 37 324-369 3-39 (511)
293 1vdc_A NTR, NADPH dependent th 69.2 2.1 7.3E-05 41.1 2.4 31 324-366 9-39 (333)
294 3ihm_A Styrene monooxygenase A 69.2 2.8 9.7E-05 42.9 3.4 33 324-368 23-55 (430)
295 2q0l_A TRXR, thioredoxin reduc 68.6 2.9 9.9E-05 39.7 3.2 33 324-367 2-34 (311)
296 3i3l_A Alkylhalidase CMLS; fla 68.6 3 0.0001 45.4 3.6 34 322-367 22-55 (591)
297 2bc0_A NADH oxidase; flavoprot 68.5 4 0.00014 42.5 4.5 36 324-368 36-71 (490)
298 2xve_A Flavin-containing monoo 68.2 2.7 9.2E-05 43.8 3.1 38 324-367 3-40 (464)
299 3dje_A Fructosyl amine: oxygen 68.2 3.1 0.00011 41.9 3.5 36 324-370 7-42 (438)
300 3c4n_A Uncharacterized protein 68.2 3.5 0.00012 41.6 3.9 35 324-368 37-71 (405)
301 4ina_A Saccharopine dehydrogen 67.9 4 0.00014 42.1 4.3 102 324-445 2-108 (405)
302 3oc4_A Oxidoreductase, pyridin 67.9 3.2 0.00011 42.6 3.6 35 324-368 3-37 (452)
303 3uox_A Otemo; baeyer-villiger 67.7 3 0.0001 44.7 3.4 33 324-368 10-42 (545)
304 1tt5_A APPBP1, amyloid protein 67.7 1.7 5.8E-05 47.1 1.5 34 324-368 33-66 (531)
305 3ka7_A Oxidoreductase; structu 67.4 3.3 0.00011 41.3 3.4 31 325-367 2-32 (425)
306 1dxl_A Dihydrolipoamide dehydr 67.4 3.7 0.00013 42.2 3.9 32 324-367 7-38 (470)
307 3urh_A Dihydrolipoyl dehydroge 67.4 3.1 0.00011 43.2 3.4 33 324-368 26-58 (491)
308 3ktd_A Prephenate dehydrogenas 67.3 5.5 0.00019 40.6 5.1 91 324-444 9-101 (341)
309 3klj_A NAD(FAD)-dependent dehy 67.3 2 6.8E-05 43.8 1.8 35 323-369 9-43 (385)
310 3fpc_A NADP-dependent alcohol 67.3 3.5 0.00012 40.9 3.6 100 303-431 151-257 (352)
311 4gcm_A TRXR, thioredoxin reduc 67.2 3.1 0.00011 39.8 3.1 31 325-367 8-38 (312)
312 1trb_A Thioredoxin reductase; 67.1 2.2 7.5E-05 40.7 2.0 32 324-367 6-37 (320)
313 3nrn_A Uncharacterized protein 67.1 3.4 0.00011 41.6 3.4 31 325-367 2-32 (421)
314 2a87_A TRXR, TR, thioredoxin r 67.0 2.8 9.6E-05 40.7 2.7 32 324-367 15-46 (335)
315 2dq4_A L-threonine 3-dehydroge 67.0 5 0.00017 39.7 4.6 105 297-431 143-253 (343)
316 3fpz_A Thiazole biosynthetic e 66.8 4.7 0.00016 39.3 4.4 34 324-367 66-99 (326)
317 1e3j_A NADP(H)-dependent ketos 66.6 7.2 0.00025 38.7 5.7 55 296-366 146-200 (352)
318 3ntd_A FAD-dependent pyridine 66.5 3.6 0.00012 43.2 3.6 36 324-369 2-37 (565)
319 4eqs_A Coenzyme A disulfide re 66.4 5 0.00017 41.4 4.6 34 325-368 2-35 (437)
320 1xdi_A RV3303C-LPDA; reductase 66.4 3.7 0.00013 42.8 3.7 36 324-368 3-38 (499)
321 3h28_A Sulfide-quinone reducta 66.3 3.4 0.00012 42.1 3.4 35 324-368 3-37 (430)
322 2e4g_A Tryptophan halogenase; 66.3 3.5 0.00012 43.8 3.5 37 324-369 26-62 (550)
323 3k30_A Histamine dehydrogenase 66.1 4 0.00014 44.8 4.0 33 324-368 392-424 (690)
324 2r9z_A Glutathione amide reduc 65.8 3.6 0.00012 42.6 3.5 32 324-367 5-36 (463)
325 4gbj_A 6-phosphogluconate dehy 65.8 2.6 9E-05 41.7 2.3 31 324-366 6-36 (297)
326 3lk7_A UDP-N-acetylmuramoylala 65.6 4.1 0.00014 42.5 3.8 26 320-345 6-31 (451)
327 2cdu_A NADPH oxidase; flavoenz 65.6 4.2 0.00014 41.7 3.9 34 325-368 2-35 (452)
328 1mo9_A ORF3; nucleotide bindin 65.6 3.5 0.00012 43.5 3.3 33 324-368 44-76 (523)
329 3nrc_A Enoyl-[acyl-carrier-pro 65.4 4.1 0.00014 39.0 3.5 37 320-368 23-62 (280)
330 1nhp_A NADH peroxidase; oxidor 65.3 4.4 0.00015 41.5 3.9 34 325-368 2-35 (447)
331 3lov_A Protoporphyrinogen oxid 65.3 4.8 0.00016 41.0 4.2 35 323-367 4-38 (475)
332 3cgb_A Pyridine nucleotide-dis 65.2 4.1 0.00014 42.3 3.8 36 324-369 37-72 (480)
333 2a8x_A Dihydrolipoyl dehydroge 65.2 3 0.0001 43.0 2.7 32 324-367 4-35 (464)
334 4ap3_A Steroid monooxygenase; 65.1 3.3 0.00011 44.5 3.0 33 324-368 22-54 (549)
335 3hhp_A Malate dehydrogenase; M 65.1 8.1 0.00028 38.9 5.8 124 325-470 2-147 (312)
336 2qcu_A Aerobic glycerol-3-phos 65.0 3.5 0.00012 43.2 3.2 33 324-368 4-36 (501)
337 2d8a_A PH0655, probable L-thre 65.0 4.8 0.00016 39.9 4.0 99 303-431 153-258 (348)
338 3v76_A Flavoprotein; structura 64.9 3.3 0.00011 42.9 2.9 34 324-369 28-61 (417)
339 1mv8_A GMD, GDP-mannose 6-dehy 64.9 11 0.00039 38.9 7.0 31 325-367 2-32 (436)
340 2eq6_A Pyruvate dehydrogenase 64.8 3.2 0.00011 42.9 2.8 33 324-368 7-39 (464)
341 2aqj_A Tryptophan halogenase, 64.8 3.6 0.00012 43.4 3.2 36 324-368 6-41 (538)
342 2yqu_A 2-oxoglutarate dehydrog 64.8 3.7 0.00013 42.2 3.3 33 324-368 2-34 (455)
343 3qj4_A Renalase; FAD/NAD(P)-bi 64.6 2.5 8.4E-05 41.3 1.8 35 324-367 2-36 (342)
344 4id9_A Short-chain dehydrogena 64.6 12 0.00041 36.2 6.8 95 321-444 17-126 (347)
345 2qae_A Lipoamide, dihydrolipoy 64.5 3.8 0.00013 42.2 3.3 33 324-368 3-35 (468)
346 1zmd_A Dihydrolipoyl dehydroge 64.5 3.7 0.00013 42.3 3.3 33 324-368 7-39 (474)
347 2hqm_A GR, grase, glutathione 64.4 3.5 0.00012 42.8 3.1 33 324-368 12-44 (479)
348 1fl2_A Alkyl hydroperoxide red 64.3 3.3 0.00011 39.3 2.6 32 324-367 2-33 (310)
349 3sx6_A Sulfide-quinone reducta 64.3 3.7 0.00013 42.0 3.1 36 324-368 5-40 (437)
350 3cmm_A Ubiquitin-activating en 64.2 3.7 0.00013 48.0 3.4 33 324-367 28-60 (1015)
351 1m6i_A Programmed cell death p 64.1 6 0.00021 41.4 4.8 35 324-368 12-46 (493)
352 2bry_A NEDD9 interacting prote 64.1 4.3 0.00015 42.8 3.7 34 324-369 93-126 (497)
353 1ebd_A E3BD, dihydrolipoamide 64.0 3.6 0.00012 42.3 3.0 32 324-367 4-35 (455)
354 2gv8_A Monooxygenase; FMO, FAD 62.7 5.1 0.00017 41.0 3.8 35 324-368 7-41 (447)
355 1ges_A Glutathione reductase; 62.6 3.6 0.00012 42.4 2.7 32 324-367 5-36 (450)
356 2cdc_A Glucose dehydrogenase g 62.4 14 0.00049 36.8 7.0 32 324-367 182-213 (366)
357 1w4x_A Phenylacetone monooxyge 62.3 4.2 0.00014 43.1 3.2 33 324-368 17-49 (542)
358 1onf_A GR, grase, glutathione 62.2 4.2 0.00014 42.6 3.2 33 324-368 3-35 (500)
359 1v59_A Dihydrolipoamide dehydr 62.2 4.7 0.00016 41.6 3.5 33 324-368 6-38 (478)
360 4a5l_A Thioredoxin reductase; 62.1 3.5 0.00012 39.1 2.3 31 325-367 6-36 (314)
361 3ihg_A RDME; flavoenzyme, anth 61.7 3.9 0.00013 42.9 2.8 34 324-369 6-39 (535)
362 3l8k_A Dihydrolipoyl dehydroge 61.7 4.6 0.00016 41.7 3.3 33 324-368 5-37 (466)
363 3r6d_A NAD-dependent epimerase 61.4 5.1 0.00017 36.4 3.2 96 324-443 6-107 (221)
364 1yqd_A Sinapyl alcohol dehydro 61.2 12 0.0004 37.5 6.2 123 305-458 173-296 (366)
365 1lvl_A Dihydrolipoamide dehydr 61.1 4.6 0.00016 41.7 3.2 32 324-367 6-37 (458)
366 4f3y_A DHPR, dihydrodipicolina 61.0 26 0.0009 34.6 8.5 95 323-441 7-102 (272)
367 2qa2_A CABE, polyketide oxygen 61.0 4.9 0.00017 42.3 3.5 32 324-367 13-44 (499)
368 3o0h_A Glutathione reductase; 60.9 5.3 0.00018 41.4 3.7 32 324-367 27-58 (484)
369 1q1r_A Putidaredoxin reductase 60.9 5.1 0.00018 41.1 3.5 35 324-368 5-39 (431)
370 3nyc_A D-arginine dehydrogenas 60.5 3.1 0.00011 40.4 1.7 33 323-368 9-41 (381)
371 2e1m_A L-glutamate oxidase; L- 60.5 5 0.00017 41.4 3.3 32 324-367 45-76 (376)
372 2pyx_A Tryptophan halogenase; 60.4 4.8 0.00016 42.3 3.3 38 324-368 8-52 (526)
373 1rsg_A FMS1 protein; FAD bindi 60.3 4 0.00014 42.6 2.6 22 324-345 9-30 (516)
374 1ojt_A Surface protein; redox- 60.3 5.1 0.00017 41.6 3.4 33 324-368 7-39 (482)
375 3ec7_A Putative dehydrogenase; 60.3 6.8 0.00023 39.3 4.2 98 319-441 19-116 (357)
376 2o7s_A DHQ-SDH PR, bifunctiona 60.3 6.6 0.00022 42.0 4.3 34 322-367 363-396 (523)
377 3gwf_A Cyclohexanone monooxyge 60.1 4 0.00014 43.7 2.6 34 324-368 9-42 (540)
378 3lad_A Dihydrolipoamide dehydr 59.9 6 0.0002 40.8 3.8 32 324-367 4-35 (476)
379 2qa1_A PGAE, polyketide oxygen 59.8 5.4 0.00018 42.0 3.5 32 324-367 12-43 (500)
380 1o94_A Tmadh, trimethylamine d 59.7 5.2 0.00018 44.3 3.5 33 324-368 390-422 (729)
381 3ek2_A Enoyl-(acyl-carrier-pro 59.6 4.7 0.00016 37.7 2.7 36 320-367 11-49 (271)
382 1rp0_A ARA6, thiazole biosynth 59.5 4.5 0.00015 39.0 2.6 35 324-369 40-74 (284)
383 3e1t_A Halogenase; flavoprotei 59.4 4.2 0.00014 42.6 2.6 33 324-368 8-40 (512)
384 3l4b_C TRKA K+ channel protien 59.3 5.5 0.00019 36.8 3.1 94 325-445 2-100 (218)
385 2gqf_A Hypothetical protein HI 59.2 3.7 0.00013 42.0 2.1 34 324-369 5-38 (401)
386 2ph5_A Homospermidine synthase 59.1 9.5 0.00032 41.1 5.3 97 324-445 14-115 (480)
387 2bi7_A UDP-galactopyranose mut 59.1 5.6 0.00019 40.3 3.4 33 323-367 3-35 (384)
388 1cjc_A Protein (adrenodoxin re 59.1 5.9 0.0002 41.4 3.6 34 324-367 7-40 (460)
389 1wly_A CAAR, 2-haloacrylate re 59.0 13 0.00044 36.4 5.9 52 301-367 127-179 (333)
390 2i0z_A NAD(FAD)-utilizing dehy 58.7 5 0.00017 41.3 3.0 33 324-368 27-59 (447)
391 3dk9_A Grase, GR, glutathione 58.6 5.3 0.00018 41.2 3.2 33 324-368 21-53 (478)
392 1s3e_A Amine oxidase [flavin-c 58.6 5.5 0.00019 41.4 3.3 32 324-367 5-36 (520)
393 3qy9_A DHPR, dihydrodipicolina 58.4 17 0.0006 35.3 6.6 34 324-368 4-37 (243)
394 2dph_A Formaldehyde dismutase; 58.3 17 0.00057 36.8 6.7 48 304-366 171-218 (398)
395 2r0c_A REBC; flavin adenine di 57.5 5.5 0.00019 42.4 3.1 33 324-368 27-59 (549)
396 3i6i_A Putative leucoanthocyan 57.5 3.1 0.00011 40.7 1.1 99 324-441 11-117 (346)
397 3m2p_A UDP-N-acetylglucosamine 57.5 24 0.00082 33.6 7.4 94 324-444 3-109 (311)
398 4dgk_A Phytoene dehydrogenase; 57.4 5.4 0.00019 40.9 3.0 22 324-345 2-23 (501)
399 2b9w_A Putative aminooxidase; 57.4 5.9 0.0002 39.6 3.2 33 324-367 7-39 (424)
400 2iid_A L-amino-acid oxidase; f 57.3 7.6 0.00026 39.9 4.0 22 324-345 34-55 (498)
401 3dfz_A SIRC, precorrin-2 dehyd 57.3 4.9 0.00017 38.8 2.5 34 321-366 29-62 (223)
402 1kol_A Formaldehyde dehydrogen 57.3 14 0.00047 37.3 5.9 48 304-366 171-218 (398)
403 1z82_A Glycerol-3-phosphate de 57.1 6.5 0.00022 38.9 3.4 99 324-449 15-116 (335)
404 1dlj_A UDP-glucose dehydrogena 56.9 13 0.00044 38.2 5.7 30 325-367 2-31 (402)
405 3uko_A Alcohol dehydrogenase c 56.7 13 0.00046 37.2 5.6 32 324-366 195-226 (378)
406 1e6u_A GDP-fucose synthetase; 56.6 10 0.00035 36.2 4.6 87 323-444 3-107 (321)
407 4gde_A UDP-galactopyranose mut 56.4 6.7 0.00023 40.0 3.4 22 324-345 11-32 (513)
408 3atr_A Conserved archaeal prot 56.3 3.2 0.00011 42.6 1.0 33 324-368 7-39 (453)
409 4fk1_A Putative thioredoxin re 56.2 7 0.00024 37.4 3.4 32 324-367 7-38 (304)
410 1ps9_A 2,4-dienoyl-COA reducta 56.1 6 0.0002 43.2 3.2 33 324-368 374-406 (671)
411 3ps9_A TRNA 5-methylaminomethy 55.8 6.5 0.00022 42.8 3.4 33 324-368 273-305 (676)
412 4b63_A L-ornithine N5 monooxyg 55.8 5.9 0.0002 41.7 3.0 23 325-347 41-63 (501)
413 1v0j_A UDP-galactopyranose mut 55.8 7.4 0.00025 39.5 3.6 22 324-345 8-29 (399)
414 2yg5_A Putrescine oxidase; oxi 55.5 6.9 0.00024 39.5 3.3 32 324-367 6-37 (453)
415 1fec_A Trypanothione reductase 55.3 8.2 0.00028 40.3 4.0 31 324-365 4-34 (490)
416 2rgh_A Alpha-glycerophosphate 55.2 6.8 0.00023 42.1 3.4 33 324-368 33-65 (571)
417 3pvc_A TRNA 5-methylaminomethy 54.9 5.7 0.00019 43.5 2.8 33 324-368 265-297 (689)
418 2wpf_A Trypanothione reductase 54.9 7.7 0.00026 40.6 3.7 31 324-365 8-38 (495)
419 3fys_A Protein DEGV; fatty aci 54.9 6.7 0.00023 39.7 3.1 156 147-358 16-179 (315)
420 4dna_A Probable glutathione re 54.9 6.3 0.00021 40.6 2.9 32 324-367 6-37 (463)
421 3qvo_A NMRA family protein; st 54.8 16 0.00056 33.6 5.5 99 324-444 24-125 (236)
422 2zb4_A Prostaglandin reductase 54.7 15 0.0005 36.4 5.5 56 298-366 137-194 (357)
423 2vvm_A Monoamine oxidase N; FA 54.3 7.3 0.00025 40.0 3.3 22 324-345 40-61 (495)
424 1gdh_A D-glycerate dehydrogena 54.3 12 0.00041 37.5 4.8 125 288-446 90-240 (320)
425 2ivd_A PPO, PPOX, protoporphyr 54.2 5.7 0.00019 40.5 2.4 22 324-345 17-38 (478)
426 3g17_A Similar to 2-dehydropan 54.1 6.8 0.00023 38.1 2.9 101 324-452 3-104 (294)
427 3e48_A Putative nucleoside-dip 54.1 14 0.00049 34.7 5.1 97 325-443 2-105 (289)
428 1f8f_A Benzyl alcohol dehydrog 54.0 20 0.00067 35.8 6.4 32 324-366 192-223 (371)
429 4b7c_A Probable oxidoreductase 53.9 17 0.00058 35.6 5.7 51 301-366 131-182 (336)
430 3dfu_A Uncharacterized protein 53.6 31 0.001 33.5 7.4 31 324-366 7-37 (232)
431 3da1_A Glycerol-3-phosphate de 53.5 6.3 0.00021 42.3 2.8 32 324-367 19-50 (561)
432 2vns_A Metalloreductase steap3 53.2 8 0.00027 36.0 3.1 92 324-449 29-120 (215)
433 3vav_A 3-methyl-2-oxobutanoate 53.0 46 0.0016 33.4 8.7 121 102-292 21-146 (275)
434 1lld_A L-lactate dehydrogenase 52.8 13 0.00044 36.2 4.7 107 324-449 8-129 (319)
435 3slg_A PBGP3 protein; structur 52.7 32 0.0011 33.6 7.5 98 321-444 22-141 (372)
436 1gte_A Dihydropyrimidine dehyd 52.7 6.9 0.00024 45.2 3.1 33 324-367 188-220 (1025)
437 3grf_A Ornithine carbamoyltran 52.6 29 0.00098 35.5 7.3 133 261-414 98-240 (328)
438 2cf5_A Atccad5, CAD, cinnamyl 52.6 21 0.00071 35.5 6.3 46 306-366 167-212 (357)
439 2v3a_A Rubredoxin reductase; a 52.4 10 0.00035 37.8 4.0 34 324-367 5-38 (384)
440 2gmh_A Electron transfer flavo 52.3 13 0.00045 39.9 5.1 36 324-367 36-73 (584)
441 2q1w_A Putative nucleotide sug 52.2 27 0.00091 33.8 6.8 103 321-443 19-136 (333)
442 3nks_A Protoporphyrinogen oxid 52.1 7.4 0.00025 39.5 2.9 34 324-367 3-36 (477)
443 1piw_A Hypothetical zinc-type 52.0 21 0.00072 35.4 6.2 46 305-366 166-211 (360)
444 1xhc_A NADH oxidase /nitrite r 52.0 8.3 0.00028 38.7 3.2 33 324-369 9-41 (367)
445 3evn_A Oxidoreductase, GFO/IDH 51.9 35 0.0012 33.5 7.7 92 323-441 5-96 (329)
446 2j3h_A NADP-dependent oxidored 51.9 16 0.00054 35.8 5.2 50 302-366 138-188 (345)
447 1qsg_A Enoyl-[acyl-carrier-pro 51.8 7.9 0.00027 36.5 2.9 33 323-367 9-44 (265)
448 1yqg_A Pyrroline-5-carboxylate 51.7 9.6 0.00033 35.8 3.4 32 325-367 2-33 (263)
449 3hdq_A UDP-galactopyranose mut 51.5 9.1 0.00031 39.7 3.5 32 324-367 30-61 (397)
450 2x8g_A Thioredoxin glutathione 51.5 8.1 0.00028 41.2 3.2 31 324-366 108-138 (598)
451 3aek_A Light-independent proto 51.5 6 0.00021 41.4 2.2 152 129-342 163-326 (437)
452 1kyq_A Met8P, siroheme biosynt 51.4 6.8 0.00023 39.0 2.4 34 322-367 12-45 (274)
453 1p0f_A NADP-dependent alcohol 51.3 20 0.0007 35.7 5.9 32 324-366 193-224 (373)
454 2fzw_A Alcohol dehydrogenase c 51.2 20 0.0007 35.6 5.9 32 324-366 192-223 (373)
455 1qo8_A Flavocytochrome C3 fuma 50.9 10 0.00035 40.4 3.8 35 324-370 122-156 (566)
456 2h6e_A ADH-4, D-arabinose 1-de 50.9 21 0.00072 35.2 5.9 32 308-343 156-191 (344)
457 1qor_A Quinone oxidoreductase; 50.8 22 0.00076 34.6 6.0 50 302-366 123-173 (327)
458 3ic9_A Dihydrolipoamide dehydr 50.7 7.1 0.00024 40.8 2.6 32 324-367 9-40 (492)
459 3two_A Mannitol dehydrogenase; 50.6 18 0.00063 35.6 5.4 44 307-366 165-208 (348)
460 1y56_A Hypothetical protein PH 50.5 4.4 0.00015 42.5 0.9 32 324-368 109-140 (493)
461 1y0p_A Fumarate reductase flav 50.3 9 0.00031 40.8 3.3 35 324-370 127-161 (571)
462 1zcj_A Peroxisomal bifunctiona 50.3 7.6 0.00026 40.9 2.7 32 324-367 38-69 (463)
463 3s2e_A Zinc-containing alcohol 50.3 17 0.00057 35.8 5.0 45 306-366 154-198 (340)
464 3fmw_A Oxygenase; mithramycin, 50.1 8.1 0.00028 41.6 2.9 32 324-367 50-81 (570)
465 3ojo_A CAP5O; rossmann fold, c 49.9 28 0.00094 36.7 6.9 58 409-471 122-184 (431)
466 3dhn_A NAD-dependent epimerase 49.8 20 0.0007 32.2 5.2 97 324-444 5-112 (227)
467 5mdh_A Malate dehydrogenase; o 49.8 3.8 0.00013 41.7 0.3 130 324-471 4-155 (333)
468 2bcg_G Secretory pathway GDP d 49.7 8.7 0.0003 39.6 3.0 34 324-369 12-45 (453)
469 3rc1_A Sugar 3-ketoreductase; 49.6 11 0.00037 37.7 3.6 95 323-445 27-124 (350)
470 1pn0_A Phenol 2-monooxygenase; 49.5 8.5 0.00029 42.2 3.1 38 324-368 9-46 (665)
471 2gjc_A Thiazole biosynthetic e 49.5 11 0.00037 38.3 3.6 37 324-370 66-102 (326)
472 3o38_A Short chain dehydrogena 49.4 10 0.00035 35.6 3.2 35 321-367 20-56 (266)
473 4fs3_A Enoyl-[acyl-carrier-pro 49.3 12 0.00039 35.7 3.6 35 321-367 4-41 (256)
474 2dkh_A 3-hydroxybenzoate hydro 49.2 6.6 0.00023 42.7 2.1 34 324-368 33-66 (639)
475 4eye_A Probable oxidoreductase 49.1 15 0.0005 36.4 4.4 49 303-366 143-192 (342)
476 1n2s_A DTDP-4-, DTDP-glucose o 49.1 14 0.00049 34.7 4.2 86 325-444 2-104 (299)
477 3pdi_A Nitrogenase MOFE cofact 49.1 12 0.00041 39.8 4.1 122 250-416 286-409 (483)
478 2b5w_A Glucose dehydrogenase; 49.1 13 0.00044 37.0 4.0 33 324-366 174-207 (357)
479 1v3u_A Leukotriene B4 12- hydr 49.1 20 0.00068 35.0 5.4 54 298-366 124-178 (333)
480 1pj5_A N,N-dimethylglycine oxi 49.0 8.9 0.00031 42.8 3.2 35 324-369 5-39 (830)
481 3nlc_A Uncharacterized protein 49.0 6.3 0.00022 42.7 1.9 32 324-367 108-139 (549)
482 3goh_A Alcohol dehydrogenase, 48.7 24 0.00082 34.2 5.9 39 302-344 126-164 (315)
483 2q3e_A UDP-glucose 6-dehydroge 48.7 46 0.0016 34.8 8.4 34 324-367 6-39 (467)
484 1zej_A HBD-9, 3-hydroxyacyl-CO 48.7 9.9 0.00034 37.9 3.1 30 324-366 13-42 (293)
485 1h2b_A Alcohol dehydrogenase; 48.6 22 0.00077 35.3 5.7 45 307-366 173-219 (359)
486 2nu8_A Succinyl-COA ligase [AD 48.3 61 0.0021 31.9 8.8 79 323-432 7-86 (288)
487 1i8t_A UDP-galactopyranose mut 48.2 7.8 0.00027 38.9 2.3 21 324-344 2-22 (367)
488 4gut_A Lysine-specific histone 48.2 13 0.00043 42.0 4.3 33 324-368 337-369 (776)
489 1e3i_A Alcohol dehydrogenase, 48.0 21 0.00071 35.7 5.4 32 324-366 197-228 (376)
490 2x5o_A UDP-N-acetylmuramoylala 47.7 8.1 0.00028 40.0 2.4 35 322-368 4-38 (439)
491 1sez_A Protoporphyrinogen oxid 47.6 8.8 0.0003 39.4 2.7 21 324-344 14-34 (504)
492 1jay_A Coenzyme F420H2:NADP+ o 47.4 10 0.00035 34.4 2.8 97 325-448 2-101 (212)
493 4h08_A Putative hydrolase; GDS 47.3 23 0.00079 31.4 5.1 47 206-269 69-115 (200)
494 4dsg_A UDP-galactopyranose mut 47.2 11 0.00039 39.3 3.4 33 324-367 10-42 (484)
495 2obn_A Hypothetical protein; s 47.1 1.2E+02 0.0041 31.2 11.0 129 324-478 8-142 (349)
496 3mog_A Probable 3-hydroxybutyr 47.1 10 0.00035 40.4 3.2 32 324-367 6-37 (483)
497 3euw_A MYO-inositol dehydrogen 47.1 31 0.0011 33.9 6.4 90 324-441 5-94 (344)
498 1uuf_A YAHK, zinc-type alcohol 46.9 24 0.00083 35.4 5.7 46 305-366 181-226 (369)
499 1rjw_A ADH-HT, alcohol dehydro 46.9 21 0.00071 35.2 5.2 44 307-366 153-196 (339)
500 2jhf_A Alcohol dehydrogenase E 46.9 22 0.00076 35.4 5.4 32 324-366 193-224 (374)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=9.3e-191 Score=1518.86 Aligned_cols=479 Identities=44% Similarity=0.812 Sum_probs=470.3
Q ss_pred CccccccCCCCCcCCCCChHHhhhcCCCCCCCCcccCHHHHHHHHHHHHhchhcccCCCCCccCchhHHHHHHHhhcccc
Q 009519 31 RGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNE 110 (533)
Q Consensus 31 ~G~~~l~~p~~NKgtaFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~~Ne 110 (533)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||++||
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~Ne 71 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLT----------SDLDRYILLMSLQDRNE 71 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHCH
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhcCcce
Confidence 69999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred hhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 009519 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (533)
Q Consensus 111 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILGLGDlG 190 (533)
+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+++++++++|||.++|++||||||||||||||||
T Consensus 72 ~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G 151 (555)
T 1gq2_A 72 KLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLG 151 (555)
T ss_dssp HHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCG
T ss_pred eeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CCceee
Q 009519 191 VQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAIVQ 269 (533)
Q Consensus 191 ~~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~-P~~~I~ 269 (533)
++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.+| |+++||
T Consensus 152 ~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~ 231 (555)
T 1gq2_A 152 CYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQ 231 (555)
T ss_dssp GGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred eecCCCchHHHHHHHHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHH
Q 009519 270 FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (533)
Q Consensus 270 ~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 349 (533)
||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+||+++|+ +
T Consensus 232 ~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAg~gia~ll~~~~~-~ 307 (555)
T 1gq2_A 232 FEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSD---HTVLFQGAGEAALGIANLIVMAMQ-K 307 (555)
T ss_dssp ECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGG---CCEEEECCSHHHHHHHHHHHHHHH-H
T ss_pred ecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999 6
Q ss_pred cCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHH
Q 009519 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 429 (533)
Q Consensus 350 ~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~ 429 (533)
+|+|+|||++||||||++|||+++|++|+++|++||+++++ .++|+|||+++|||||||+|+++|+|||||||+
T Consensus 308 ~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~ 381 (555)
T 1gq2_A 308 EGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCE------MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQD 381 (555)
T ss_dssp HTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCC------CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHH
T ss_pred cCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 79999999999999999999999998899999999998643 368999999999999999999999999999999
Q ss_pred hhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhhHHHHHhCCcc
Q 009519 430 MRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARF 509 (533)
Q Consensus 430 Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~ 509 (533)
||+ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+++||||||+|+|||||||+++++|++
T Consensus 382 Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~ 460 (555)
T 1gq2_A 382 MAA-FNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKH 460 (555)
T ss_dssp HHH-HCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSS
T ss_pred HHh-cCCCCEEEECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeE
Confidence 975 9999999999999999999999999999999999999999999997799999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhcccCCCC
Q 009519 510 ITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 510 Itd~M~~aAA~alA~~v~~~~ 530 (533)
|||+|+++||++||+++++++
T Consensus 461 Itd~M~~aAA~alA~~v~~~~ 481 (555)
T 1gq2_A 461 IGDDVFLTTAEVIAQEVSEEN 481 (555)
T ss_dssp CCHHHHHHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHHHHhcccccc
Confidence 999999999999999998753
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=6.5e-190 Score=1516.10 Aligned_cols=483 Identities=42% Similarity=0.787 Sum_probs=472.2
Q ss_pred ccCccccccCCCCCcCCCCChHHhhhcCCCCCCCCcccCHHHHHHHHHHHHhchhcccCCCCCccCchhHHHHHHHhhcc
Q 009519 29 HKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDR 108 (533)
Q Consensus 29 ~~~G~~~l~~p~~NKgtaFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~~ 108 (533)
..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||++
T Consensus 2 ~~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~ 71 (564)
T 1pj3_A 2 KEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT----------SPLEKYIYIMGIQER 71 (564)
T ss_dssp CCCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCC----------SHHHHHHHHHHHHTT
T ss_pred CCchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhhcc
Confidence 3689999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred cchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCC
Q 009519 109 NETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGD 188 (533)
Q Consensus 109 Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILGLGD 188 (533)
||+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+++++++++|||.++|++||||||||||||||
T Consensus 72 Ne~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD 151 (564)
T 1pj3_A 72 NEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGD 151 (564)
T ss_dssp CHHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCC
T ss_pred cceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CCce
Q 009519 189 LGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAI 267 (533)
Q Consensus 189 lG~~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~-P~~~ 267 (533)
||++||+||+||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.+| |+++
T Consensus 152 ~G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~ 231 (564)
T 1pj3_A 152 LGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTL 231 (564)
T ss_dssp CGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 8999
Q ss_pred eeeecCCCchHHHHHHHHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHH
Q 009519 268 VQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (533)
Q Consensus 268 I~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 347 (533)
||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+||+++|+
T Consensus 232 I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ll~~~m~ 308 (564)
T 1pj3_A 232 IQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISE---HKILFLGAGEAALGIANLIVMSMV 308 (564)
T ss_dssp EEECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHHHHHHHHH
T ss_pred EeehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhH---cEEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHH
Q 009519 348 RMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEV 426 (533)
Q Consensus 348 ~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteev 426 (533)
++|+|+|||++||||||++|||+++| ++|+++|++||++++++ ..++|+|||+.+|||||||+|+++|+|||||
T Consensus 309 -~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~----~~~~L~eav~~vkp~vlIG~S~~~g~ft~ev 383 (564)
T 1pj3_A 309 -ENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPES----IPDTFEDAVNILKPSTIIGVAGAGRLFTPDV 383 (564)
T ss_dssp -HTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSS----CCSSHHHHHHHHCCSEEEECCCSSCCSCHHH
T ss_pred -HcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCcc----ccCCHHHHHhhcCCCEEEEeCCCCCCCCHHH
Confidence 68999999999999999999999999 78999999999987642 1368999999999999999999999999999
Q ss_pred HHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhhHHHHHhC
Q 009519 427 LKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSG 506 (533)
Q Consensus 427 v~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~ 506 (533)
||+||+ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+++||||||+|+|||||||+++++
T Consensus 384 v~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~ 462 (564)
T 1pj3_A 384 IRAMAS-INERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCN 462 (564)
T ss_dssp HHHHHH-HCSSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTT
T ss_pred HHHHHh-cCCCCEEEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcC
Confidence 999975 9999999999999999999999999999999999999999999996699999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHhcccCCCC
Q 009519 507 ARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 507 a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
|++|||+|+++||++||+++++++
T Consensus 463 A~~Itd~M~~aAA~aLA~~v~~~~ 486 (564)
T 1pj3_A 463 TRHISDSVFLEAAKALTSQLTDEE 486 (564)
T ss_dssp CSCCCHHHHHHHHHHHHTTCCHHH
T ss_pred CeECCHHHHHHHHHHHHhhccccc
Confidence 999999999999999999998753
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=7e-190 Score=1520.05 Aligned_cols=487 Identities=45% Similarity=0.800 Sum_probs=475.0
Q ss_pred CCCceeeccCccccccCCCCCcCCCCChHHhhhcCCCCCCCCcccCHHHHHHHHHHHHhchhcccCCCCCccCchhHHHH
Q 009519 22 IPGPCMVHKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRI 101 (533)
Q Consensus 22 ~~~~~~~~~~G~~~l~~p~~NKgtaFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~ 101 (533)
...++.+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+|
T Consensus 29 ~~~~~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~ 98 (605)
T 1o0s_A 29 RPERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQP----------NDLARYIQ 98 (605)
T ss_dssp SCCCCCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSS----------SHHHHHHH
T ss_pred CCCccccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCC----------CcHHHHHH
Confidence 33455667899999999999999999999999999999999999999999999999999999 89999999
Q ss_pred HHHhhcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCCh--hhHHHHHhcCCCCCeeEEEEec
Q 009519 102 LNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDK--GEMMSMIYNWPAQQVDMIVLTD 179 (533)
Q Consensus 102 L~~L~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~--~~i~~~l~n~p~~~v~viVVTD 179 (533)
|++||++||+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+ ++++++++|||.++|++|||||
T Consensus 99 L~~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTD 178 (605)
T 1o0s_A 99 LDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTD 178 (605)
T ss_dssp HHHHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEEC
T ss_pred HHHhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CceeeccCCCCCCcccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHH
Q 009519 180 GSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAV 259 (533)
Q Consensus 180 G~rILGLGDlG~~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av 259 (533)
|||||||||||++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|
T Consensus 179 G~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av 258 (605)
T 1o0s_A 179 GERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKAC 258 (605)
T ss_dssp SSCBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHH
T ss_pred cccceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhC-CCceeeeecCCCchHHHHHHHHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHH
Q 009519 260 HARW-PKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGV 338 (533)
Q Consensus 260 ~~~~-P~~~I~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~Gi 338 (533)
+.+| |+++||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+||
T Consensus 259 ~~~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigi 335 (605)
T 1o0s_A 259 TKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQ---EKYLFFGAGAASTGI 335 (605)
T ss_dssp HHHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHH
T ss_pred HHHhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHH
Confidence 9999 899999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccC
Q 009519 339 LKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGV 418 (533)
Q Consensus 339 A~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~ 418 (533)
|+||+++|+ ++|+|++||++||||||++|||+++|++|+++|++||+++++ .++|+|||+.+|||||||+|++
T Consensus 336 a~ll~~~m~-~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkpdVlIG~S~~ 408 (605)
T 1o0s_A 336 AEMIVHQMQ-NEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPE------TTSILEVIRAARPGALIGASTV 408 (605)
T ss_dssp HHHHHHHHH-TTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCC------CCCHHHHHHHHCCSEEEECSSC
T ss_pred HHHHHHHHH-HcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCC
Confidence 999999999 789999999999999999999999998899999999998643 3689999999999999999999
Q ss_pred CCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhh
Q 009519 419 GGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGI 498 (533)
Q Consensus 419 ~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGi 498 (533)
+|+|||||||+||+ +|+|||||||||||++|||+||||++||+|+|||||||||+||+| +||+++||||||+|+||||
T Consensus 409 ~g~ft~evv~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~-~Grs~~pnQ~NN~liFPGi 486 (605)
T 1o0s_A 409 RGAFNEEVIRAMAE-INERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFEL-NGHTYKPGQGNNAYIFPGV 486 (605)
T ss_dssp TTCSCHHHHHHHHH-HCSSCEEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEE-TTEEECCEECCGGGTHHHH
T ss_pred CCCCCHHHHHHHHh-cCCCCEEEECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeE-CCEEeccccccceeeccch
Confidence 99999999999975 999999999999999999999999999999999999999999999 5999999999999999999
Q ss_pred hHHHHHhCCcccCHHHHHHHHHHHhcccCCCC
Q 009519 499 GLGTLLSGARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 499 glG~l~~~a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
|||+++++|++|||+|+++||++||+++++++
T Consensus 487 ~lGal~~~A~~Itd~M~~aAA~aLA~~v~~~~ 518 (605)
T 1o0s_A 487 ALGTILFQIRHVDNDLFLLAAKKVASCVTEDS 518 (605)
T ss_dssp HHHHHHHTBSCCCHHHHHHHHHHHHHTCCHHH
T ss_pred hhhhhhcCCeEcCHHHHHHHHHHHHhhccccc
Confidence 99999999999999999999999999998754
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.4e-115 Score=923.30 Aligned_cols=346 Identities=26% Similarity=0.355 Sum_probs=317.9
Q ss_pred hcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeec
Q 009519 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (533)
Q Consensus 106 ~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILG 185 (533)
..+-+. --++.+++.+| ||++||||||++|++|+ +|++++++++.+| ++||||||||||||
T Consensus 44 ~GKi~v-~~~~~~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILG 104 (487)
T 3nv9_A 44 KGKIQI-MPKCTLAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLG 104 (487)
T ss_dssp TSSEEE-EECSCCSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGG
T ss_pred CCeEEE-EecCCCCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeee
Confidence 455444 36778888888 89999999999999998 7899999888866 69999999999999
Q ss_pred cCCCCC-CcccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 009519 186 LGDLGV-QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (533)
Q Consensus 186 LGDlG~-~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P 264 (533)
|||||+ +||||||||++|||+||||| |||||||+||+| +++| +||||++|+.+||
T Consensus 105 LGDiG~~agmpImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d-------------------~defve~v~~~~P 160 (487)
T 3nv9_A 105 DGDVTPPGGLGVMEGKALLMKYLGGID---AVPICIDSKNKE--GKND-------------------PDAVIEFVQRIQH 160 (487)
T ss_dssp GBCCCGGGGHHHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBC-------------------HHHHHHHHHHHGG
T ss_pred ccccccccCCchhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCC-------------------HHHHHHHHHHhCC
Confidence 999999 79999999999999999999 999999999866 4566 5999999999999
Q ss_pred Cc-eeeeecCCCchHHHHHHHHhc--cCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHH
Q 009519 265 KA-IVQFEDFQMKWAFETLERYRK--RFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (533)
Q Consensus 265 ~~-~I~~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (533)
++ +||||||++||||+||+|||+ .||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+|
T Consensus 161 ~fG~InlEDf~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d---~riV~~GAGaAGigia~l 237 (487)
T 3nv9_A 161 TFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHE---CRMVFIGAGSSNTTCLRL 237 (487)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGG---CCEEEECCSHHHHHHHHH
T ss_pred CCCeecHhhcCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHH
Confidence 98 999999999999999999999 589999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCC-----ChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEec
Q 009519 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-----DPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS 416 (533)
Q Consensus 342 l~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l-----~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S 416 (533)
|+. .|+++ +||||||++|||+++|++| .++|.+||+.+++ ....+|+|||++ +|||||+|
T Consensus 238 l~~-----~G~~~----~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~----~~~~~L~eav~~--adVlIG~S 302 (487)
T 3nv9_A 238 IVT-----AGADP----KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNP----SKFGSIAEACVG--ADVLISLS 302 (487)
T ss_dssp HHH-----TTCCG----GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCT----TCCCSHHHHHTT--CSEEEECC
T ss_pred HHH-----cCCCc----ccEEEEeccccccCCcchhhhhcccHHHHHHHHhccc----ccCCCHHHHHhc--CCEEEEec
Confidence 974 58886 8999999999999999777 4467788987643 145789999999 79999999
Q ss_pred cC-CCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeec
Q 009519 417 GV-GGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLF 495 (533)
Q Consensus 417 ~~-~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iF 495 (533)
++ ||+|||||||+|+ +|||||||||||| ||+||||++ +|+|||||| |+++|||+||+|+|
T Consensus 303 ~~~pg~ft~e~V~~Ma----~~PIIFaLSNPtp--Ei~pe~A~~--~G~aIvATG-----------rsd~PnQ~NN~liF 363 (487)
T 3nv9_A 303 TPGPGVVKAEWIKSMG----EKPIVFCCANPVP--EIYPYEAKE--AGAYIVATG-----------RGDFPNQVNNSVGF 363 (487)
T ss_dssp CSSCCCCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHH--TTCSEEEES-----------CTTSSSBCCGGGTH
T ss_pred ccCCCCCCHHHHHhhc----CCCEEEECCCCCc--cCCHHHHHH--hCCEEEEEC-----------CCCCcccCcceeEc
Confidence 76 7999999999994 7999999999998 999999998 699999996 77889999999999
Q ss_pred hhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCCCC
Q 009519 496 PGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNEPI 531 (533)
Q Consensus 496 PGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~~~ 531 (533)
||||||++++||++|||+|+++||++||++++++.+
T Consensus 364 PGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~l 399 (487)
T 3nv9_A 364 PGILKGALIVRARKITDNMAIAASRALAEFAEKRGI 399 (487)
T ss_dssp HHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTCC
T ss_pred chhhHHHHHcCCcccCHHHHHHHHHHHHhhCCcccC
Confidence 999999999999999999999999999999987754
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=2.9e-109 Score=865.07 Aligned_cols=339 Identities=31% Similarity=0.459 Sum_probs=313.1
Q ss_pred hcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeec
Q 009519 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (533)
Q Consensus 106 ~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILG 185 (533)
..+- .+++++.+++.++ |||+||||||++|++|+ +|+++++ +|+.++++|+|||||+||||
T Consensus 19 ~gk~-~~~~~~~~~~~~~-l~i~YtP~V~~~c~~i~-------------~~p~~v~----~~t~~~~~V~VvTdG~~iLG 79 (398)
T 2a9f_A 19 GGKL-EVQPKVDIKTKHD-LSIAYTPGVASVSSAIA-------------KDKTLAY----DLTTKKNTVAVISDGTAVLG 79 (398)
T ss_dssp TSSE-EEEESSCCSSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHH----HHSGGGTEEEEEECSSSCTT
T ss_pred CCeE-EEEEecccCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----HhcccCCEEEEEECCccccC
Confidence 4443 4579999999877 79999999999999998 5888877 56668899999999999999
Q ss_pred cCCCCCC-cccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 009519 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (533)
Q Consensus 186 LGDlG~~-Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P 264 (533)
|||+|++ |||||+||+.|||+||||| ++|||||+|| +||||++|+.+||
T Consensus 80 LGD~G~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~p 129 (398)
T 2a9f_A 80 LGDIGPEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALAP 129 (398)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHGG
T ss_pred CCCcccccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999984 7999999999999
Q ss_pred C-ceeeeecCCCchHHHHHHHHhcc--CceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHH
Q 009519 265 K-AIVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (533)
Q Consensus 265 ~-~~I~~EDf~~~~af~iL~ryr~~--~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (533)
+ .+||||||++||||++|+|||++ +|||||||||||+|+|||++||+|++|++++| +||||+|||+||+|||++
T Consensus 130 ~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d---~kVVi~GAGaAG~~iA~l 206 (398)
T 2a9f_A 130 TFGGINLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDE---VSIVVNGGGSAGLSITRK 206 (398)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTS---CEEEEECCSHHHHHHHHH
T ss_pred ceeEeccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCc---cEEEEECCCHHHHHHHHH
Confidence 9 59999999999999999999997 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCC
Q 009519 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (533)
Q Consensus 342 l~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g 420 (533)
++.+ |. +|||++|++|||+++| ++|+++|++||++.+.. ....+|+|+|+. +|+|||+|+ ||
T Consensus 207 l~~~-----Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~---~~~~~L~eav~~--ADV~IG~Sa-pg 269 (398)
T 2a9f_A 207 LLAA-----GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE---FKSGTLEDALEG--ADIFIGVSA-PG 269 (398)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCT---TCCCSCSHHHHT--TCSEEECCS-TT
T ss_pred HHHc-----CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcc---cchhhHHHHhcc--CCEEEecCC-CC
Confidence 9985 53 7999999999999999 88999999999986542 235789999999 899999998 99
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhhH
Q 009519 421 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 500 (533)
Q Consensus 421 ~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 500 (533)
+||+|+|++|+ ++||||||||||+ ||+||||++| |++||||| |+++|||+||+|+||||||
T Consensus 270 l~T~EmVk~Ma----~~pIIfalsNPt~--E~~pe~a~~~--g~~i~atG-----------rs~~p~Q~NN~~~FPgi~~ 330 (398)
T 2a9f_A 270 VLKAEWISKMA----ARPVIFAMANPIP--EIYPDEALEA--GAYIVGTG-----------RSDFPNQINNVLAFPGIFR 330 (398)
T ss_dssp CCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHTT--TCSEEEES-----------CTTSSSBCCGGGTHHHHHH
T ss_pred CCCHHHHHhhC----CCCEEEECCCCCc--cCCHHHHHHh--CCeEEEeC-----------CCCCCCcCCceeEcchHHH
Confidence 99999999995 8999999999997 9999999999 89999995 8999999999999999999
Q ss_pred HHHHhCCcccCHHHHHHHHHHHhcccCCCCCC
Q 009519 501 GTLLSGARFITDGMLQQAAEWYVCDNCNEPIS 532 (533)
Q Consensus 501 G~l~~~a~~Itd~M~~aAA~alA~~v~~~~~~ 532 (533)
|++++||++|||+|+++||++||+++++++.+
T Consensus 331 Gal~~~a~~I~d~m~~aAa~alA~~~~~~~~~ 362 (398)
T 2a9f_A 331 GALDARAKTITVEMQIAAAKGIASLVPDDALS 362 (398)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHTCSSCSSC
T ss_pred HHHHcCCcCCCHHHHHHHHHHHHhcCCcccCC
Confidence 99999999999999999999999999987654
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=3.6e-104 Score=825.30 Aligned_cols=332 Identities=27% Similarity=0.415 Sum_probs=309.6
Q ss_pred hcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeec
Q 009519 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (533)
Q Consensus 106 ~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILG 185 (533)
..+- .+++++.+++.++ |||+||||||++|++|+ .|+++++ +|+.++++|+|||||+||||
T Consensus 23 ~gk~-~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~-------------~~p~~v~----~~t~~~~~V~VvTdg~~vLG 83 (388)
T 1vl6_A 23 KGKI-RTALPVEKVDRET-LSLLYTPGVADVARACA-------------EDPEKTY----VYTSRWNTVAVVSDGSAVLG 83 (388)
T ss_dssp TCSC-EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH-------------HCGGGHH----HHSGGGGEEEEEECSTTBTT
T ss_pred CCeE-EEEEeeecCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----hhcccCCeEEEEECCccccC
Confidence 4443 4579999999988 79999999999999998 4777776 46668899999999999999
Q ss_pred cCCCCCC-cccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 009519 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (533)
Q Consensus 186 LGDlG~~-Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P 264 (533)
|||+|++ |||||+||+.|||+||||| ++|||||+|| +||||++|+++||
T Consensus 84 lGD~G~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~p 133 (388)
T 1vl6_A 84 LGNIGPYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLEP 133 (388)
T ss_dssp TBSCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTGG
T ss_pred CCccccccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999995 9999999999999999999 9999999984 7999999999999
Q ss_pred C-ceeeeecCCCchHHHHHHHHhcc--CceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHH
Q 009519 265 K-AIVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (533)
Q Consensus 265 ~-~~I~~EDf~~~~af~iL~ryr~~--~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (533)
+ .+||||||+++|||++|+|||++ ||||||||||||+|++||++||+|++|++++| +||||+|||+||+++|++
T Consensus 134 ~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~---~kVVv~GAGaAG~~iAkl 210 (388)
T 1vl6_A 134 SFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEE---VKVVVNGIGAAGYNIVKF 210 (388)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CEEEEECCSHHHHHHHHH
T ss_pred cceEeCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCC---cEEEEECCCHHHHHHHHH
Confidence 9 49999999999999999999997 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCeEEEEeccCccccCCCC--CChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCC
Q 009519 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN--LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (533)
Q Consensus 342 l~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~--l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~ 419 (533)
|+.+ |. ++||++|++|||+.+|++ |+++|++||++.+.. ....+|+|+|+. +|+|||+|+ |
T Consensus 211 l~~~-----G~------~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~eav~~--ADVlIG~Sa-p 273 (388)
T 1vl6_A 211 LLDL-----GV------KNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLETALEG--ADFFIGVSR-G 273 (388)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHHHHHTT--CSEEEECSC-S
T ss_pred HHhC-----CC------CeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHHHHHcc--CCEEEEeCC-C
Confidence 9875 42 799999999999999976 999999999986542 235789999999 899999999 8
Q ss_pred CCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhh
Q 009519 420 GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIG 499 (533)
Q Consensus 420 g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGig 499 (533)
|+||+|+|++|+ ++||||+|||||+ ||+||||++| |+|||||| |+++|||+||+|+|||||
T Consensus 274 ~l~t~emVk~Ma----~~pIIfalSNPt~--E~~p~~a~~~--g~~i~atG-----------r~~~p~Q~NN~~~FPgi~ 334 (388)
T 1vl6_A 274 NILKPEWIKKMS----RKPVIFALANPVP--EIDPELAREA--GAFIVATG-----------RSDHPNQVNNLLAFPGIM 334 (388)
T ss_dssp SCSCHHHHTTSC----SSCEEEECCSSSC--SSCHHHHHHT--TCSEEEES-----------CTTSSSBCCGGGTHHHHH
T ss_pred CccCHHHHHhcC----CCCEEEEcCCCCC--CCCHHHHHHh--cCeEEEeC-----------CCCCCCcCCceeEcchHh
Confidence 999999999995 7999999999997 9999999999 89999995 899999999999999999
Q ss_pred HHHHHhCCcccCHHHHHHHHHHHhccc
Q 009519 500 LGTLLSGARFITDGMLQQAAEWYVCDN 526 (533)
Q Consensus 500 lG~l~~~a~~Itd~M~~aAA~alA~~v 526 (533)
||++++||+ |||+|+++||++||+++
T Consensus 335 ~Gal~~~a~-i~~~m~~aAa~alA~~~ 360 (388)
T 1vl6_A 335 KGAVEKRSK-ITKNMLLSAVEAIARSC 360 (388)
T ss_dssp HHHHHHCSC-CCHHHHHHHHHHHHHTS
T ss_pred HHHHhcCCc-cCHHHHHHHHHHHHhhh
Confidence 999999999 99999999999999998
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=3e-78 Score=639.97 Aligned_cols=334 Identities=29% Similarity=0.469 Sum_probs=304.2
Q ss_pred hhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 009519 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (533)
Q Consensus 111 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILGLGDlG 190 (533)
..++++.+++.++ |||+||||||++|++|+ +|++++++ |+.++|+++|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 3468999999977 79999999999999999 59998887 555789999999999999999999
Q ss_pred CC-cccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCCc-ee
Q 009519 191 VQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IV 268 (533)
Q Consensus 191 ~~-Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P~~-~I 268 (533)
.+ ++|+|+||+.||++||||| ++|++||+ +| +|||+++|+.++|++ +|
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv--------~d-------------------~de~~~~v~~l~~~f~Gi 132 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKE--------QE-------------------PNKFIDIVKAIAPTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSC--------CS-------------------HHHHHHHHHHTGGGCSEE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---Ceeeeeec--------CC-------------------HHHHHHHHHHhCccCcEE
Confidence 95 9999999999999999999 99999999 23 699999999999995 99
Q ss_pred eeecCCCchHHHHHHHHhcc--CceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHH
Q 009519 269 QFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (533)
Q Consensus 269 ~~EDf~~~~af~iL~ryr~~--~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~ 346 (533)
|||||+.|+||++|++|++. +||||||+||||.+.++|+++|++.+|+++++ +|+||+|||+||.+|+.+|.++
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~---~rvlvlGAGgAg~aia~~L~~~- 208 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISE---ITLALFGAGAAGFATLRILTEA- 208 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CCEEEECCSHHHHHHHHHHHHT-
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccC---CEEEEECccHHHHHHHHHHHHc-
Confidence 99999999999999999985 89999999999999999999999999999999 9999999999999999999864
Q ss_pred HHHcCCChhhhcCeEEEEe----ccCccccCCCC---CChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCC
Q 009519 347 ARMAGNNDAFARNKFFLLD----KDGLITKERKN---LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (533)
Q Consensus 347 ~~~~Gls~~eA~~~i~lvD----~~GLi~~~r~~---l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~ 419 (533)
|.++ ++||++| ++||++++ ++ |.++|.+|++..+.. ....+|.|+++. +|+|||+|+.+
T Consensus 209 ----G~~~----~~I~vvd~~~~R~G~~~~a-~~~~~L~~~~~~~a~~~~~~---~~~~~L~e~l~~--aDVlInaT~~~ 274 (439)
T 2dvm_A 209 ----GVKP----ENVRVVELVNGKPRILTSD-LDLEKLFPYRGWLLKKTNGE---NIEGGPQEALKD--ADVLISFTRPG 274 (439)
T ss_dssp ----TCCG----GGEEEEEEETTEEEECCTT-SCHHHHSTTCHHHHTTSCTT---CCCSSHHHHHTT--CSEEEECSCCC
T ss_pred ----CCCc----CeEEEEEccCCCcCccccc-cchhHHHHHHHHHhhccccc---cccccHHHHhcc--CCEEEEcCCCc
Confidence 6653 6899999 99999887 45 788888888754321 124679999988 89999999975
Q ss_pred -CCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhh
Q 009519 420 -GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGI 498 (533)
Q Consensus 420 -g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGi 498 (533)
|+|++++++.|+ ++||||+||||++ ||++++|++| |++++||| +++.|+|+||+|+||||
T Consensus 275 ~G~~~~e~v~~m~----~~~iVfDLynP~~--t~~~~~A~~~--G~~ivatG-----------~~ml~~Q~nn~~~FPGi 335 (439)
T 2dvm_A 275 PGVIKPQWIEKMN----EDAIVFPLANPVP--EILPEEAKKA--GARIVATG-----------RSDYPNQINNLLGFPGI 335 (439)
T ss_dssp SSSSCHHHHTTSC----TTCEEEECCSSSC--SSCHHHHHHH--TCSEECBS-----------CSSSSSBCCGGGTHHHH
T ss_pred cCCCChHHHHhcC----CCCEEEECCCCCC--cchHHHHHHc--CCeEEcCC-----------CchhHHHHHHHhcccCc
Confidence 999999999994 7999999999998 9999999998 78999985 88999999999999999
Q ss_pred hHHHHHhCCcccCHHHHHHHHHHHhcccCCC
Q 009519 499 GLGTLLSGARFITDGMLQQAAEWYVCDNCNE 529 (533)
Q Consensus 499 glG~l~~~a~~Itd~M~~aAA~alA~~v~~~ 529 (533)
|+|++++||++|||+|+++||++||+++.++
T Consensus 336 ~~g~l~~~a~~i~~~m~~aaa~ala~~~~~~ 366 (439)
T 2dvm_A 336 FRGALDVRARTITDSMIIAAAKAIASIVEEP 366 (439)
T ss_dssp HHHHHHTTCSCCCHHHHHHHHHHHHHTSSSC
T ss_pred hHHHHhcCCCCCCHHHHHHHHHHHHhhCccc
Confidence 9999999999999999999999999999764
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.98 E-value=1.7e-09 Score=114.92 Aligned_cols=164 Identities=16% Similarity=0.175 Sum_probs=117.5
Q ss_pred HHHHHHHHhCCCceeeeecCCC--ch-HHHHHHHHh---ccCcee----------ccCcchhHHHHHHHHHHHHHHhCCC
Q 009519 254 EFMEAVHARWPKAIVQFEDFQM--KW-AFETLERYR---KRFCMF----------NDDIQGTAGVALAGLLGTVRAQGLS 317 (533)
Q Consensus 254 efv~av~~~~P~~~I~~EDf~~--~~-af~iL~ryr---~~~~~F----------nDDiQGTaaV~LAgli~Alr~~g~~ 317 (533)
.++..++..||+.+=++--++- .. ..|+-+..+ -.+|+| +|+++||+.+++.+++. .++..
T Consensus 132 dl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~ 208 (436)
T 3h9u_A 132 DLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVM 208 (436)
T ss_dssp HHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCC
T ss_pred HHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCc
Confidence 4556667777765322211111 12 223322222 238999 89999999999999965 56888
Q ss_pred CCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCC
Q 009519 318 LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREG 397 (533)
Q Consensus 318 l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~ 397 (533)
+.. .+++|+|.|..|.++|+.+..+ |. +++++|++ +.+...|.... ...
T Consensus 209 L~G---ktVgIiG~G~IG~~vA~~Lka~-----Ga-------~Viv~D~~-----------p~~a~~A~~~G-----~~~ 257 (436)
T 3h9u_A 209 IAG---KTACVCGYGDVGKGCAAALRGF-----GA-------RVVVTEVD-----------PINALQAAMEG-----YQV 257 (436)
T ss_dssp CTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT-----CEE
T ss_pred ccC---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCC-----------hhhhHHHHHhC-----Cee
Confidence 888 9999999999999999998765 43 68888873 22222222211 123
Q ss_pred CCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhc
Q 009519 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (533)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~ 459 (533)
.+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|++.. |+.++.+.+
T Consensus 258 ~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK----~gAIVINvgRg~v--EID~~~L~~ 311 (436)
T 3h9u_A 258 LLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR----DDAIVCNIGHFDT--EIQVAWLKA 311 (436)
T ss_dssp CCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC----TTEEEEECSSSGG--GBCHHHHHH
T ss_pred cCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC----CCcEEEEeCCCCC--ccCHHHHHh
Confidence 579999988 99999888778999999999994 7899999999987 999987765
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.94 E-value=4.1e-09 Score=111.90 Aligned_cols=170 Identities=19% Similarity=0.226 Sum_probs=122.9
Q ss_pred CCChhhhhHhHHHHHHHHHHhCCCceeeeecCCCchHHHHH---------------------HHHhc-------cCcee-
Q 009519 242 RLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETL---------------------ERYRK-------RFCMF- 292 (533)
Q Consensus 242 R~~g~eY~~~vdefv~av~~~~P~~~I~~EDf~~~~af~iL---------------------~ryr~-------~~~~F- 292 (533)
--+.|||...++..+.+ ....|+..| |-+..=...+- .||+. .+|+|
T Consensus 111 g~~~~ey~~~~~~~~~~-~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 111 GESEDDFWWCIDRCVNV-EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp TCCHHHHHHHHHHHHCB-TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCCHHHHHHHHHHHHhc-cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 34678888888776531 112255544 44443333222 34443 38999
Q ss_pred ---------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEE
Q 009519 293 ---------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL 363 (533)
Q Consensus 293 ---------nDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~l 363 (533)
+|+++||+.++++|+.++ ++..+.. .+++|+|+|..|.++|+.+... |. +++.
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~G---ktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv 248 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGG---KQVVVCGYGEVGKGCCAALKAM-----GS-------IVYV 248 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecC---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 899999999999999765 6888888 9999999999999999988754 43 6888
Q ss_pred EeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEec
Q 009519 364 LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM 443 (533)
Q Consensus 364 vD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaL 443 (533)
+|++. .+...|.... ....+|.|+++. .|++|.+++..++++++.++.|. +..||+-.
T Consensus 249 ~D~dp-----------~ra~~A~~~G-----~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK----~gailINv 306 (435)
T 3gvp_A 249 TEIDP-----------ICALQACMDG-----FRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK----NSCIVCNM 306 (435)
T ss_dssp ECSCH-----------HHHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC----TTEEEEEC
T ss_pred EeCCh-----------hhhHHHHHcC-----CEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC----CCcEEEEe
Confidence 88642 2222222110 013579999987 99999998888999999999994 68999999
Q ss_pred CCCCCcccCCHHHH
Q 009519 444 SNPTMNAECTAADA 457 (533)
Q Consensus 444 SNPt~~aE~tpe~A 457 (533)
+++.. |+..+..
T Consensus 307 grg~~--EId~~~L 318 (435)
T 3gvp_A 307 GHSNT--EIDVASL 318 (435)
T ss_dssp SSTTT--TBTGGGG
T ss_pred cCCCc--cCCHHHH
Confidence 99977 8887654
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.66 E-value=3.6e-08 Score=102.98 Aligned_cols=227 Identities=17% Similarity=0.274 Sum_probs=135.3
Q ss_pred CChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCC--CcccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccC
Q 009519 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLED 232 (533)
Q Consensus 155 ~d~~~i~~~l~n~p~~~v~viVVTDG~rILGLGDlG~--~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~D 232 (533)
-+++.++++.. .+.+|+|.++++..+|++|.+. .|+.|+.+ ..+|. | +++|.+. +
T Consensus 25 ltP~~v~~L~~----~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk--------~ 81 (401)
T 1x13_A 25 ATPKTVEQLLK----LGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVN--------A 81 (401)
T ss_dssp CCHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSS--------C
T ss_pred CCHHHHHHHHH----CCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeC--------C
Confidence 46778888887 4578999999999999999997 49999998 67776 1 4677652 2
Q ss_pred cccccccccCCChhhhhHhHHHHHHHHHHhCCCc-eeeeecCCCchHHHHHHHHhcc-Cceec-cCc------c----hh
Q 009519 233 RLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR-FCMFN-DDI------Q----GT 299 (533)
Q Consensus 233 P~YlG~r~~R~~g~eY~~~vdefv~av~~~~P~~-~I~~EDf~~~~af~iL~ryr~~-~~~Fn-DDi------Q----GT 299 (533)
| .+|.++.+ -|+. +|-+=..+. .-..++.++++ +++|+ |.+ | .+
T Consensus 82 p------------------~~~~i~~l---~~~~~li~~~~~~~--d~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 82 P------------------LDDEIALL---NPGTTLVSFIWPAQ--NPELMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp C------------------CHHHHTTC---CTTCEEEECCCGGG--CHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred C------------------CHHHHHHh---cCCCcEEEEecCCC--CHHHHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 2 13333322 2432 333322222 12344555544 77773 222 2 56
Q ss_pred HHHHHHHHHHHHHHh----CCCC-------CCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 300 AGVALAGLLGTVRAQ----GLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 300 aaV~LAgli~Alr~~----g~~l-------~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
....+|| .+|++.. ++.. .++...+|+|+|+|.+|.++++++... |. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCH
Confidence 6666665 4444443 2211 023348999999999999999987654 42 688999864
Q ss_pred ccccCCCCCCh------------hhhccccccCC-cCCccCCCCHHHHhcccCCcEEEEeccC-----CCCCCHHHHHHh
Q 009519 369 LITKERKNLDP------------AAAPFAKDPGD-FMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAM 430 (533)
Q Consensus 369 Li~~~r~~l~~------------~k~~~A~~~~~-~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Fteevv~~M 430 (533)
-.......+.. .+..|++...+ +. .....+|.+.++. .|++|++... +.+++++.++.|
T Consensus 206 ~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFI-KAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHHHHTTCEECCC--------CCHHHHHHSHHHH-HHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHHHHcCCEEEEecccccccccccchhhccHHHH-HHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 32110000100 00001110000 00 0001147788877 8999998533 367999999999
Q ss_pred hhcCCCCCeEEecCCCC
Q 009519 431 RESDSVKPAIFAMSNPT 447 (533)
Q Consensus 431 a~~~~erPIIFaLSNPt 447 (533)
. +..+|+-+|+|.
T Consensus 283 k----~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K----AGSVIVDLAAQN 295 (401)
T ss_dssp C----TTCEEEETTGGG
T ss_pred C----CCcEEEEEcCCC
Confidence 4 688999999873
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.07 E-value=9e-06 Score=87.59 Aligned_cols=131 Identities=21% Similarity=0.274 Sum_probs=98.9
Q ss_pred cCcee----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhh
Q 009519 288 RFCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA 357 (533)
Q Consensus 288 ~~~~F----------nDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA 357 (533)
.+|+| .|+++||+..++.++. |.++..|.. .+++|.|+|..|.++|+.+... |.
T Consensus 226 ~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~G---KtVvVtGaGgIG~aiA~~Laa~-----GA----- 289 (488)
T 3ond_A 226 LFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAG---KVAVVAGYGDVGKGCAAALKQA-----GA----- 289 (488)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-----
T ss_pred CCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccC---CEEEEECCCHHHHHHHHHHHHC-----CC-----
Confidence 38999 7899999999999887 688988888 9999999998888888887654 42
Q ss_pred cCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCC
Q 009519 358 RNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVK 437 (533)
Q Consensus 358 ~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~er 437 (533)
+++++|++. .+...+.... ....++.++++. .|+++-.++..++++.+.++.|. +.
T Consensus 290 --~Viv~D~~~-----------~~a~~Aa~~g-----~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk----~g 345 (488)
T 3ond_A 290 --RVIVTEIDP-----------ICALQATMEG-----LQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK----NN 345 (488)
T ss_dssp --EEEEECSCH-----------HHHHHHHHTT-----CEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC----TT
T ss_pred --EEEEEcCCH-----------HHHHHHHHhC-----CccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC----CC
Confidence 788888742 1111111100 012356777766 89999888888999999999994 68
Q ss_pred CeEEecCCCCCcccCCHHHHhcc
Q 009519 438 PAIFAMSNPTMNAECTAADAFKH 460 (533)
Q Consensus 438 PIIFaLSNPt~~aE~tpe~A~~w 460 (533)
.||+-.+++.. |+..++.-.|
T Consensus 346 aiVvNaG~~~~--Ei~~~~l~~~ 366 (488)
T 3ond_A 346 AIVCNIGHFDN--EIDMLGLETH 366 (488)
T ss_dssp EEEEESSSTTT--TBTHHHHHTS
T ss_pred eEEEEcCCCCc--ccchHHHHHh
Confidence 89999999855 8888776555
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.06 E-value=1.6e-05 Score=85.14 Aligned_cols=128 Identities=19% Similarity=0.211 Sum_probs=96.1
Q ss_pred cCcee----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhh
Q 009519 288 RFCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA 357 (533)
Q Consensus 288 ~~~~F----------nDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA 357 (533)
.+|+| .|...||+-.++.|+. |.++..+.. .+++|+|.|..|.++|+.+... |+
T Consensus 208 ~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~G---KTVgVIG~G~IGr~vA~~lraf-----Ga----- 271 (464)
T 3n58_A 208 PFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAG---KVAVVCGYGDVGKGSAQSLAGA-----GA----- 271 (464)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-----
T ss_pred CCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccC---CEEEEECcCHHHHHHHHHHHHC-----CC-----
Confidence 38999 6889999999998886 567888888 9999999999999999988754 43
Q ss_pred cCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCC
Q 009519 358 RNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVK 437 (533)
Q Consensus 358 ~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~er 437 (533)
+++++|++. .....|... + ....+|.|+++. .|+++-+++..++++++.++.|. +.
T Consensus 272 --~Viv~d~dp-----------~~a~~A~~~----G-~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK----~G 327 (464)
T 3n58_A 272 --RVKVTEVDP-----------ICALQAAMD----G-FEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK----DM 327 (464)
T ss_dssp --EEEEECSSH-----------HHHHHHHHT----T-CEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC----TT
T ss_pred --EEEEEeCCc-----------chhhHHHhc----C-ceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC----CC
Confidence 688887532 111112110 0 012469999987 99999988778999999999994 68
Q ss_pred CeEEecCCCCCcccCCHHHH
Q 009519 438 PAIFAMSNPTMNAECTAADA 457 (533)
Q Consensus 438 PIIFaLSNPt~~aE~tpe~A 457 (533)
.||.-.++... |+..+..
T Consensus 328 AILINvGRgdv--EID~~aL 345 (464)
T 3n58_A 328 CIVGNIGHFDN--EIQVAAL 345 (464)
T ss_dssp EEEEECSSSTT--TBTCGGG
T ss_pred eEEEEcCCCCc--ccCHHHH
Confidence 88888887765 5554433
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.63 E-value=0.00072 Score=69.71 Aligned_cols=238 Identities=15% Similarity=0.185 Sum_probs=123.5
Q ss_pred CChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCC--CcccccchhhhhHhhhcCCCCCceecEEeeccCC-----ch
Q 009519 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTN-----NQ 227 (533)
Q Consensus 155 ~d~~~i~~~l~n~p~~~v~viVVTDG~rILGLGDlG~--~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTn-----N~ 227 (533)
-.|+.++++.. .+.+|+|.++++...|+.|... .|..|+.++..++ ++.| |+|.+.+- ++
T Consensus 18 l~P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~ 84 (384)
T 1l7d_A 18 ISPEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGT 84 (384)
T ss_dssp CCHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSC
T ss_pred CCHHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCH
Confidence 36777777777 4678999999999999999886 5899998877666 3433 56655321 11
Q ss_pred hc---c-cCcccccccccCCChhhhhHhHHHHHHHHHHhCCCceeeeecCCCchHHHHHHHHhccCceeccCcchhHHHH
Q 009519 228 KL---L-EDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVA 303 (533)
Q Consensus 228 ~L---l-~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P~~~I~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~ 303 (533)
+. + ..-.+++.-|.- ++ .+.+++++++--. ++.+|-+....+ ...+++|+ ....
T Consensus 85 ~~i~~l~~~~~~i~~~~~~-----~~---~~~~~~~~~~gi~-~~~~e~~~~~~~-------~~~l~~l~------~~a~ 142 (384)
T 1l7d_A 85 DEVALIKEGAVLMCHLGAL-----TN---RPVVEALTKRKIT-AYAMELMPRISR-------AQSMDILS------SQSN 142 (384)
T ss_dssp CGGGGSCTTCEEEEECCGG-----GC---HHHHHHHHHTTCE-EEEGGGCCCSGG-------GGGGCHHH------HHHH
T ss_pred HHHHhhccCCEEEEEeccc-----CC---HHHHHHHHHCCCE-EEEecccccccc-------ccccchhh------HHHH
Confidence 11 1 111122222210 00 1122232222211 222222211000 00122222 1112
Q ss_pred HH---HHHHHHHHhCCCC-------CCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC
Q 009519 304 LA---GLLGTVRAQGLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (533)
Q Consensus 304 LA---gli~Alr~~g~~l-------~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~ 373 (533)
+| +++.+.+..++.. .++...+|+|+|+|.+|.++++.+... |. +|+++|++.--...
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHH
Confidence 22 5666666655411 133449999999999999999887654 42 48889875321000
Q ss_pred CCCCC-------h-------hhhccccccC-CcCCccCCCCHHHHhcccCCcEEEEeccC-----CCCCCHHHHHHhhhc
Q 009519 374 RKNLD-------P-------AAAPFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRES 433 (533)
Q Consensus 374 r~~l~-------~-------~k~~~A~~~~-~~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Fteevv~~Ma~~ 433 (533)
...+. . .+-.|++... ++.. .....|.+.++. .|++|.++.. +.+++++.++.|.
T Consensus 211 ~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk-- 285 (384)
T 1l7d_A 211 VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRK-KQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK-- 285 (384)
T ss_dssp HHHTTCEECCC-----------------------C-CHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC--
T ss_pred HHHcCCeEEeecccccccccccccchhhcCHHHHh-hhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC--
Confidence 00000 0 0001111100 0000 001127788876 8999998832 3578999999994
Q ss_pred CCCCCeEEecCCC
Q 009519 434 DSVKPAIFAMSNP 446 (533)
Q Consensus 434 ~~erPIIFaLSNP 446 (533)
+..+|+-+|-+
T Consensus 286 --~g~vivdva~~ 296 (384)
T 1l7d_A 286 --PGSVIIDLAVE 296 (384)
T ss_dssp --TTCEEEETTGG
T ss_pred --CCCEEEEEecC
Confidence 67899989854
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.12 E-value=0.00012 Score=77.19 Aligned_cols=111 Identities=22% Similarity=0.317 Sum_probs=69.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCC--------------hhhhccccccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD--------------PAAAPFAKDPG 389 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~--------------~~k~~~A~~~~ 389 (533)
.||+|+|+|.+|..+|+++..+ |. +++++|++.-..+....+. +-+..|++...
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHTTCEECCCCC-----------------
T ss_pred CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcc
Confidence 8999999999999999988765 32 6899998754211100010 00112333110
Q ss_pred -CcCCccCCCCHHHHhcccCCcEEEEeccC-----CCCCCHHHHHHhhhcCCCCCeEEecCC-CCCcccCC
Q 009519 390 -DFMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSN-PTMNAECT 453 (533)
Q Consensus 390 -~~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~~aE~t 453 (533)
++. ..+..+|.|+++. .|++|++... +.+||+|+++.|. +.+||+-+|- |-...|.+
T Consensus 259 ~~~~-~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk----~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 259 GEYQ-VKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK----PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp CHHH-HHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC----TTCEEEETTGGGTCSBTTC
T ss_pred hhhh-hhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC----CCCEEEEEeCCCCCCcccc
Confidence 000 0012479999988 9999998433 4689999999994 7999999994 33334554
No 15
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.76 E-value=0.015 Score=57.36 Aligned_cols=141 Identities=13% Similarity=0.107 Sum_probs=92.7
Q ss_pred HHHHHHHhcc-CceeccC------cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcC
Q 009519 279 FETLERYRKR-FCMFNDD------IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAG 351 (533)
Q Consensus 279 f~iL~ryr~~-~~~FnDD------iQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~G 351 (533)
..+.+..+++ +.++|=. .-.+-+|+=.++..++...+..+.. .+++|+|+|..|..+|+.+... |
T Consensus 107 id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G 178 (293)
T 3d4o_A 107 TYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHG---ANVAVLGLGRVGMSVARKFAAL-----G 178 (293)
T ss_dssp HHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTT---CEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred HHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCC---CEEEEEeeCHHHHHHHHHHHhC-----C
Confidence 4444555544 8888843 3355566666666667777877887 9999999999999999988653 4
Q ss_pred CChhhhcCeEEEEeccCccccCCCCCChhhhccccc-cCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHh
Q 009519 352 NNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM 430 (533)
Q Consensus 352 ls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~-~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~M 430 (533)
. +++.+|+.. .+...+.. .... ....+|.|+++. .|++|-... .+.++++.++.|
T Consensus 179 ~-------~V~~~dr~~-----------~~~~~~~~~g~~~---~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~m 234 (293)
T 3d4o_A 179 A-------KVKVGARES-----------DLLARIAEMGMEP---FHISKAAQELRD--VDVCINTIP-ALVVTANVLAEM 234 (293)
T ss_dssp C-------EEEEEESSH-----------HHHHHHHHTTSEE---EEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHS
T ss_pred C-------EEEEEECCH-----------HHHHHHHHCCCee---cChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhc
Confidence 2 688888742 11111110 0000 012358888876 899997663 689999999998
Q ss_pred hhcCCCCCeEEecC-CCCCcccCCHHHHh
Q 009519 431 RESDSVKPAIFAMS-NPTMNAECTAADAF 458 (533)
Q Consensus 431 a~~~~erPIIFaLS-NPt~~aE~tpe~A~ 458 (533)
. +..+++=+| +|. ++..+.|.
T Consensus 235 k----~~~~lin~ar~~~---~~~~~~a~ 256 (293)
T 3d4o_A 235 P----SHTFVIDLASKPG---GTDFRYAE 256 (293)
T ss_dssp C----TTCEEEECSSTTC---SBCHHHHH
T ss_pred C----CCCEEEEecCCCC---CCCHHHHH
Confidence 3 577888888 454 35555553
No 16
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.69 E-value=0.00088 Score=70.15 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=65.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCC-------C---hhhhccccccCC-cC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-------D---PAAAPFAKDPGD-FM 392 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l-------~---~~k~~~A~~~~~-~~ 392 (533)
.||+|+|+|.+|..+|+.+..... +++++|++.-....-..+ + .....|++...+ +.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa------------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGA------------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTC------------EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCC------------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHH
Confidence 899999999999999999876532 689999864311100000 0 000011110000 00
Q ss_pred CccCCCCHHHHhcccCCcEEEEeccC-----CCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 393 GLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
.....+|.++++. .|++|++-.. +.+||+++++.|. +..+|+-+|=+.
T Consensus 253 -~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk----pGsVIVDvA~d~ 305 (381)
T 3p2y_A 253 -AQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ----PGSVVVDLAGET 305 (381)
T ss_dssp -HHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC----TTCEEEETTGGG
T ss_pred -hhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC----CCcEEEEEeCCC
Confidence 0012468899988 9999997433 4579999999994 789999998543
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.46 E-value=0.027 Score=59.79 Aligned_cols=185 Identities=16% Similarity=0.167 Sum_probs=126.7
Q ss_pred CCChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCchHH--HHHHHHhccC-----cee----------ccCcchhHHHH
Q 009519 242 RLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF--ETLERYRKRF-----CMF----------NDDIQGTAGVA 303 (533)
Q Consensus 242 R~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~af--~iL~ryr~~~-----~~F----------nDDiQGTaaV~ 303 (533)
..+..|-..|...|++++.+.- |..-|-=+|++..-.. -+.++|+... .|+ .|--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 3456777788999999998876 7778888999874222 2567775321 122 33445688888
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhh-h
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA-A 382 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k-~ 382 (533)
..++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +
T Consensus 205 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~-GlD~~~l~ 269 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQN---ARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD-GLDIPYLL 269 (424)
T ss_dssp HHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCccc---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHH
Confidence 88899999999998888 9999999999999999999775 32 3467999999999754 344322 1
Q ss_pred ccccccCCcCCc-cCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 383 PFAKDPGDFMGL-REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 383 ~~A~~~~~~~~~-~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
.+......+.+. ....+-.++ -.++.||||=+.. .+.+|++-++.+ .-.+|.--+| |+.
T Consensus 270 ~~~~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~-~n~I~~~~a~~l-----~ak~V~EgAN~p~t 330 (424)
T 3k92_A 270 DKRDSFGMVTNLFTDVITNEEL-LEKDCDILVPAAI-SNQITAKNAHNI-----QASIVVERANGPTT 330 (424)
T ss_dssp HHCCSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSC-SSCBCTTTGGGC-----CCSEEECCSSSCBC
T ss_pred HHHHHhCCCCCCCcEEecCccc-eeccccEEeecCc-ccccChhhHhhc-----CceEEEcCCCCCCC
Confidence 121111100000 011223343 3568999998876 599999988877 4578888888 653
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.39 E-value=0.14 Score=54.76 Aligned_cols=185 Identities=12% Similarity=0.110 Sum_probs=125.8
Q ss_pred cCCChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCchH--HHHHHHHh---ccC-cee----------ccCcchhHHHH
Q 009519 241 PRLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYR---KRF-CMF----------NDDIQGTAGVA 303 (533)
Q Consensus 241 ~R~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~a--f~iL~ryr---~~~-~~F----------nDDiQGTaaV~ 303 (533)
+..+..|...|...|++.+.+.. |...|--.|++..-. --+...|+ +.. .|| .+.-.-||-=+
T Consensus 139 k~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 139 KGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 34577888899999999987766 888999999976432 12444444 332 333 23334477777
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhc
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~ 383 (533)
.-++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|++.. .++..+..
T Consensus 219 ~~~~~~~~~~~~~~l~G---k~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~-Gid~e~l~ 283 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEG---MRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES-GFTKEKLA 283 (450)
T ss_dssp HHHHHHHHHHTTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCcCC---CEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC-CCCHHHHH
Confidence 88888899999999888 9999999999999999999875 32 4567789999998754 35443321
Q ss_pred cccc-cCCcCCccCCCCHHH-------------HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 384 FAKD-PGDFMGLREGASLLE-------------VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 384 ~A~~-~~~~~~~~~~~~L~e-------------~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
.... ... ....+.+ -+-.++.|||+=+.. .+.+|++-++.+.+ +.-.+|.--+| |+.
T Consensus 284 ~l~e~k~~-----~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a--~g~k~IaEgAN~p~t 355 (450)
T 4fcc_A 284 RLIEIKSS-----RDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIA--NGVKAVAEGANMPTT 355 (450)
T ss_dssp HHHHHHTS-----TTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhcc-----cCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHh--cCceEEecCCCCCCC
Confidence 1100 000 0011111 123468999998876 69999999999954 33468887888 653
No 19
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.18 E-value=0.0066 Score=61.85 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCch-hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCC
Q 009519 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN 376 (533)
Q Consensus 298 GTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~ 376 (533)
+-.-+|-.|++-.++..+.+++. .++||+|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~--------- 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAG---RHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK--------- 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT---------
T ss_pred CccCchHHHHHHHHHHcCCCCCC---CEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC---------
Confidence 33456778899999999999888 999999999 5899999988763 3 268888642
Q ss_pred CChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 009519 377 LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (533)
Q Consensus 377 l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNP 446 (533)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 199 --------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 --------------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK-------PGAIVIDCGIN 239 (301)
T ss_dssp --------------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCCB
T ss_pred --------------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC-------CCcEEEEccCC
Confidence 1348999988 99999999999999998875 45677777754
No 20
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.11 E-value=0.12 Score=55.36 Aligned_cols=192 Identities=16% Similarity=0.148 Sum_probs=127.5
Q ss_pred CCChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCch--HHHHHHHHhcc---Cc-ee----------ccCcchhHHHHH
Q 009519 242 RLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR---FC-MF----------NDDIQGTAGVAL 304 (533)
Q Consensus 242 R~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~--af~iL~ryr~~---~~-~F----------nDDiQGTaaV~L 304 (533)
-.+..|...|...||+.+.+.. |..-|-=+|++..- ---+.+.|+.. .+ |+ ..--.-||-=+.
T Consensus 144 ~~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~ 223 (456)
T 3r3j_A 144 GKSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVV 223 (456)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHH
Confidence 3466778888888999886655 88888899998743 22355666532 21 11 122234676677
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhc-
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP- 383 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~- 383 (533)
-++-.+++..|.+|+. .||+|-|.|..|...|+.|.++.. +-+.+.|++|-|++.. .|+..+..
T Consensus 224 ~~~~~~~~~~g~~l~g---~~VaVQG~GnVG~~aa~~L~e~Ga-----------kvVavsD~~G~iyd~~-Gld~~~l~~ 288 (456)
T 3r3j_A 224 YFAENVLKDLNDNLEN---KKCLVSGSGNVAQYLVEKLIEKGA-----------IVLTMSDSNGYILEPN-GFTKEQLNY 288 (456)
T ss_dssp HHHHHHHHTTTCCSTT---CCEEEECCSHHHHHHHHHHHHHTC-----------CBCCEECSSCEEECTT-CCCHHHHHH
T ss_pred HHHHHHHHHcCCCccC---CEEEEECCCHHHHHHHHHHHHCCC-----------EEEEEECCCCcEECCC-CCCHHHHHH
Confidence 7788888888988888 999999999999999999977533 3345899999998754 35433221
Q ss_pred --------------cccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 384 --------------FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 384 --------------~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
|+...+... .-....+ -.++.||||=+.. ++.+|++-++.+.+ +.-+||.--+| |+.
T Consensus 289 ~~~~k~~~~~~v~~~~~~~~~a~-~v~~~~i----~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T 360 (456)
T 3r3j_A 289 IMDIKNNQRLRLKEYLKYSKTAK-YFENQKP----WNIPCDIAFPCAT-QNEINENDADLFIQ--NKCKMIVEGANMPTH 360 (456)
T ss_dssp HHHHHHTSCCCGGGGGGTCSSCE-EECSCCG----GGSCCSEEEECSC-TTCBCHHHHHHHHH--HTCCEEECCSSSCBC
T ss_pred HHHHHHhcCcchhhhhhcCCCce-EeCCccc----cccCccEEEeCCC-ccchhhHHHHHHHh--cCCeEEEecCCCCCC
Confidence 111000000 0011222 3467999998876 79999999999842 35679999999 754
Q ss_pred cccCCHHHHhc
Q 009519 449 NAECTAADAFK 459 (533)
Q Consensus 449 ~aE~tpe~A~~ 459 (533)
.| +++.++
T Consensus 361 -~e--A~~iL~ 368 (456)
T 3r3j_A 361 -IK--ALHKLK 368 (456)
T ss_dssp -TT--HHHHHH
T ss_pred -HH--HHHHHH
Confidence 23 556655
No 21
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.05 E-value=0.058 Score=57.14 Aligned_cols=189 Identities=19% Similarity=0.193 Sum_probs=126.3
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCch--HHHHHHHHhcc---C--cee----------ccCcchhHHHHH
Q 009519 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR---F--CMF----------NDDIQGTAGVAL 304 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~--af~iL~ryr~~---~--~~F----------nDDiQGTaaV~L 304 (533)
.+..|-..+...|++++...- |..-|-=+|++..- --.+.++|+.. . .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 455677788999999998877 78888889998753 23456677431 0 122 233345777777
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccCccccCCCCCChhhh-
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA- 382 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~-lvD~~GLi~~~r~~l~~~k~- 382 (533)
-++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +++ +.|++|-|++.. .|+..+.
T Consensus 203 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~~a~~L~~~-----Ga-------kVVavsD~~G~i~dp~-Gld~~~l~ 266 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRG---ARVVVQGLGQVGAAVALHAERL-----GM-------RVVAVATSMGGMYAPE-GLDVAEVL 266 (419)
T ss_dssp HHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEcCCCeEECCC-CCCHHHHH
Confidence 7788888889998888 9999999999999999988764 42 566 999999998764 3433221
Q ss_pred ccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCCcccCCHHHHhc
Q 009519 383 PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTMNAECTAADAFK 459 (533)
Q Consensus 383 ~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~~aE~tpe~A~~ 459 (533)
.+.+....+.+. ..+-.+ +-.++.|||+=++. .+.+|++-.+.+ .-.||.--+| |+. .| +++.++
T Consensus 267 ~~~~~~g~v~~~--~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l-----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 267 SAYEATGSLPRL--DLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV-----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHHHSSCSCC--CBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC-----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHHHhhCCccee--eccchh-hhccCceEEEeccc-ccccccchHhhC-----CceEEEECCCCcCC-HH--HHHHHH
Confidence 111111111000 000012 23478999998875 799999999887 3469999998 654 23 445554
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.96 E-value=0.011 Score=59.83 Aligned_cols=91 Identities=18% Similarity=0.262 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCCh
Q 009519 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP 379 (533)
Q Consensus 301 aV~LAgli~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~ 379 (533)
-+|-.|++..++..+.+++. .++|++|+|. .|..+|.+|... |. .+.+++|+
T Consensus 142 PcTp~gv~~lL~~~~i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~------------ 194 (285)
T 3l07_A 142 SCTPKGIMTMLREYGIKTEG---AYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF------------ 194 (285)
T ss_dssp CHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 45777888999999999998 9999999876 899999998763 32 57777642
Q ss_pred hhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 380 AAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 380 ~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
+ .+|.+.++. +|++|...+.++.+++|+|| +.-+|+=++
T Consensus 195 --------t---------~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 233 (285)
T 3l07_A 195 --------T---------TDLKSHTTK--ADILIVAVGKPNFITADMVK-------EGAVVIDVG 233 (285)
T ss_dssp --------C---------SSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECC
T ss_pred --------c---------hhHHHhccc--CCEEEECCCCCCCCCHHHcC-------CCcEEEEec
Confidence 1 248899988 99999999999999998874 455776664
No 23
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.93 E-value=0.064 Score=57.20 Aligned_cols=191 Identities=14% Similarity=0.168 Sum_probs=126.1
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCc--hHHHHHHHHhcc---C--cee----------ccCcchhHHHHH
Q 009519 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMK--WAFETLERYRKR---F--CMF----------NDDIQGTAGVAL 304 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~--~af~iL~ryr~~---~--~~F----------nDDiQGTaaV~L 304 (533)
.+..|-..|...|++++...- |..-|-=+|++.. .--.+.++|+.. . .|+ ++.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 455677788999999998877 7888888999874 223356677431 1 222 233345776667
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccCccccCCCCCChhhh-
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA- 382 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~-lvD~~GLi~~~r~~l~~~k~- 382 (533)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+. |. +++ +.|++|-|++.. .|+..+.
T Consensus 220 ~~~~~~~~~~g~~l~g---~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~-Gld~~~l~ 283 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEG---ARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEA-GIDPYDLL 283 (440)
T ss_dssp HHHHHHHHHHTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCC-CCCHHHHH
Confidence 7788888889998888 9999999999999999988764 42 455 999999998865 2332211
Q ss_pred ccccccCCcCCc--cCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCCcccCCHHHHhc
Q 009519 383 PFAKDPGDFMGL--REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTMNAECTAADAFK 459 (533)
Q Consensus 383 ~~A~~~~~~~~~--~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~~aE~tpe~A~~ 459 (533)
.+......+.+. ....+-.+. -.++.||||=+.. ++.+|++-++.+ .-.+|.--+| |+. .| +++.++
T Consensus 284 ~~~~~~g~i~~y~~a~~i~~~ei-~~~~~DIlvPcA~-~n~i~~~na~~l-----~ak~VvEgAN~p~t-~e--A~~iL~ 353 (440)
T 3aog_A 284 RHVQEFGGVRGYPKAEPLPAADF-WGLPVEFLVPAAL-EKQITEQNAWRI-----RARIVAEGANGPTT-PA--ADDILL 353 (440)
T ss_dssp HHHHHTSSSTTCTTSEECCHHHH-TTCCCSEEEECSS-SSCBCTTTGGGC-----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred HHHHhcCCcccCCCceEcCchhh-hcCCCcEEEecCC-cCccchhhHHHc-----CCcEEEecCccccC-HH--HHHHHH
Confidence 111111111100 011233443 4578999998776 789999888877 3568888888 654 22 445544
No 24
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.85 E-value=0.068 Score=56.60 Aligned_cols=183 Identities=16% Similarity=0.161 Sum_probs=110.6
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCch--HHHHHHHHhcc---C---cee----------ccCcchhHHHH
Q 009519 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR---F---CMF----------NDDIQGTAGVA 303 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~--af~iL~ryr~~---~---~~F----------nDDiQGTaaV~ 303 (533)
.+..|-..+...|++++...- |..-|-=+|++..- --.+.++|+.. . .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 455677788999999998877 78888899999752 22466777532 1 122 22233466666
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc-----CccccCCCCCC
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD-----GLITKERKNLD 378 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~-----GLi~~~r~~l~ 378 (533)
.-++-.+++..|.+|+. .||+|.|.|..|...|++|.+. |. +=+-+.|++ |-|++.. .|+
T Consensus 196 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~-Gld 260 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMED---AKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNEN-GID 260 (421)
T ss_dssp HHHHHHHHHHTTCCGGG---SCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSS-CCC
T ss_pred HHHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCC-CCC
Confidence 66778888888988888 9999999999999999988764 42 234489999 9998864 343
Q ss_pred hhhh-ccccccCCcCCcc--CCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 009519 379 PAAA-PFAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (533)
Q Consensus 379 ~~k~-~~A~~~~~~~~~~--~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt 447 (533)
.... .+.+....+.+.+ ...+-.+ +-.++.||||=+.. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 261 ~~~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l-----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 261 FKELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI-----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC-----CCSEEECCSSSCS
T ss_pred HHHHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc-----CCeEEEeCCcccc
Confidence 2211 1111110000000 0011112 23456788886654 677787777766 3456666666 54
No 25
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.64 E-value=0.018 Score=58.23 Aligned_cols=95 Identities=16% Similarity=0.269 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCC
Q 009519 300 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 378 (533)
Q Consensus 300 aaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~ 378 (533)
.-+|-.|++..++..+.+++. .++||+|+|- .|..+|.+|... |. .+.+++++
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~G---k~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~----------- 193 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEG---KDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK----------- 193 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------
T ss_pred CCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-----------
Confidence 456778899999999999999 9999999876 899999998764 32 57888642
Q ss_pred hhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecC-CCC
Q 009519 379 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS-NPT 447 (533)
Q Consensus 379 ~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLS-NPt 447 (533)
..+|.+.++. +|++|...+.++.++.|+|| +.-+|+=++ ||.
T Consensus 194 ------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 ------------------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK-------EGVIVVDVGINRL 236 (285)
T ss_dssp ------------------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC-------TTEEEEECCCEEC
T ss_pred ------------------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC-------CCeEEEEeccCcc
Confidence 0248899988 99999999999999998874 455666554 454
No 26
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.52 E-value=0.02 Score=58.00 Aligned_cols=106 Identities=17% Similarity=0.222 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCCh
Q 009519 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP 379 (533)
Q Consensus 301 aV~LAgli~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~ 379 (533)
-+|-.|++..++..+.+++. .++|++|+|- .|..+|.+|... |. .+.+++++
T Consensus 142 PcTp~gv~~lL~~~~i~l~G---k~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~------------ 194 (286)
T 4a5o_A 142 PCTPKGIMTLLASTGADLYG---MDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF------------ 194 (286)
T ss_dssp CHHHHHHHHHHHHTTCCCTT---CEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 45778889999999999988 9999999875 899999998763 32 57777541
Q ss_pred hhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEec-CCCCCc----ccCCH
Q 009519 380 AAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM-SNPTMN----AECTA 454 (533)
Q Consensus 380 ~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaL-SNPt~~----aE~tp 454 (533)
..+|.+.++. +|++|...+.++.++.|+|| +.-+|+=+ +||.+. --+.+
T Consensus 195 -----------------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvgi~~~~~gkl~GDVdf 248 (286)
T 4a5o_A 195 -----------------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK-------EGAIVIDVGINRQADGRLVGDVEY 248 (286)
T ss_dssp -----------------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCSCSSCCCCSSCSBCH
T ss_pred -----------------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC-------CCeEEEEecccccccCCcccCccH
Confidence 1248899988 99999999999999998885 44577665 466531 13455
Q ss_pred HHHhc
Q 009519 455 ADAFK 459 (533)
Q Consensus 455 e~A~~ 459 (533)
+++.+
T Consensus 249 ~~v~~ 253 (286)
T 4a5o_A 249 EVAAQ 253 (286)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55544
No 27
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.51 E-value=0.017 Score=58.13 Aligned_cols=137 Identities=9% Similarity=0.127 Sum_probs=92.2
Q ss_pred HHHHHHHHHhC--CCc---eeeeecCCCchHHHHHHHHh--ccCceeccC--------cchhHHHHHHHHHHHHHHhCCC
Q 009519 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLS 317 (533)
Q Consensus 253 defv~av~~~~--P~~---~I~~EDf~~~~af~iL~ryr--~~~~~FnDD--------iQGTaaV~LAgli~Alr~~g~~ 317 (533)
+|+++.+++.. |++ ++|+==.+.-+..++++.-. +.+=.||.- ..+-.-+|-.|++..++..+
T Consensus 70 ~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~~-- 147 (276)
T 3ngx_A 70 KDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYG-- 147 (276)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcCCCCCCCCcHHHHHHHHHHhC--
Confidence 56777776665 553 55553333334444444431 223233321 12234467789999999998
Q ss_pred CCCCCCceEEEeCch-hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccC
Q 009519 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (533)
Q Consensus 318 l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~ 396 (533)
++. .++|++|+| ..|..+|.+|... |. .+.+++++
T Consensus 148 l~G---k~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~----------------------------- 183 (276)
T 3ngx_A 148 YHE---NTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK----------------------------- 183 (276)
T ss_dssp CCS---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------------------------
T ss_pred cCC---CEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC-----------------------------
Confidence 777 999999997 5899999998764 32 57888652
Q ss_pred CCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
..+|.+.++. +|++|...+.++.++++++| +.-+|+=++
T Consensus 184 t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 222 (276)
T 3ngx_A 184 TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT-------PGSVVIDVG 222 (276)
T ss_dssp CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC-------TTCEEEECC
T ss_pred cccHHHhhcc--CCEEEECCCCCccccHhhcc-------CCcEEEEec
Confidence 1348999998 99999999999999998874 445777664
No 28
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.47 E-value=0.016 Score=58.77 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCC
Q 009519 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN 376 (533)
Q Consensus 298 GTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~ 376 (533)
+-.-+|-.|++-.++..+.+++. .++||+|+|. .|.-+|.++... | ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~--------- 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFG---LNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF--------- 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS---------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCC---CEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC---------
Confidence 33456778899999999999988 9999999995 799999888753 3 368888531
Q ss_pred CChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 009519 377 LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (533)
Q Consensus 377 l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNP 446 (533)
..+|.+.++. +|++|+..+.++.+++++|| +.-+|+=++-|
T Consensus 193 --------------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk-------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 --------------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK-------EGAIVIDVGIN 233 (288)
T ss_dssp --------------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC-------TTCEEEECCCE
T ss_pred --------------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC-------CCcEEEEccCC
Confidence 1348999988 99999999999999998874 45577777754
No 29
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.19 E-value=0.023 Score=57.84 Aligned_cols=95 Identities=14% Similarity=0.280 Sum_probs=74.1
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCC
Q 009519 297 QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERK 375 (533)
Q Consensus 297 QGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~ 375 (533)
.|-.-+|-.|++..++..+.+++. .++||+|+|- .|..+|.+|... |. .+.+++++ +
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAG---KRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C
Confidence 343456778899999999999999 9999999876 899999998764 32 58888761 0
Q ss_pred CCChhhhccccccCCcCCccCCCCHH--HHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 376 NLDPAAAPFAKDPGDFMGLREGASLL--EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 376 ~l~~~k~~~A~~~~~~~~~~~~~~L~--e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
.+|. +.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 200 ----------------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 239 (300)
T 4a26_A 200 ----------------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK-------EGAAVVDVG 239 (300)
T ss_dssp ----------------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC-------TTCEEEECC
T ss_pred ----------------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC-------CCcEEEEEe
Confidence 1255 88988 99999999999999998874 455776554
No 30
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.15 E-value=0.096 Score=56.36 Aligned_cols=124 Identities=20% Similarity=0.283 Sum_probs=87.5
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC
Q 009519 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (533)
Q Consensus 294 DDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~ 373 (533)
+.+.|.......| + .+.++..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 234 r~~~~~~~~l~~g-w--~r~~~~~l~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~---- 291 (479)
T 1v8b_A 234 DNVYGCRHSLPDG-L--MRATDFLISG---KIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI---- 291 (479)
T ss_dssp HHHHHHHHHHHHH-H--HHHHCCCCTT---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----
T ss_pred hchHhHHHHHhhh-h--hhccccccCC---CEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----
Confidence 3445555555666 3 2567877888 9999999999999999998765 33 7888887421
Q ss_pred CCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCC
Q 009519 374 RKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECT 453 (533)
Q Consensus 374 r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~t 453 (533)
... ..+... ....+|.|+++. .|++|......+.++++.++.|. +..||.=.+.-.. |+.
T Consensus 292 -----~~~-~a~~~g------~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gailiNvgrg~~--EId 351 (479)
T 1v8b_A 292 -----CAI-QAVMEG------FNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK----NNAVVGNIGHFDD--EIQ 351 (479)
T ss_dssp -----HHH-HHHTTT------CEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC----TTCEEEECSSTTT--SBC
T ss_pred -----hHH-HHHHcC------CEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC----CCcEEEEeCCCCc--ccc
Confidence 000 111110 012479999987 99999997778999999999993 5778888887555 677
Q ss_pred HHHHhc
Q 009519 454 AADAFK 459 (533)
Q Consensus 454 pe~A~~ 459 (533)
-++..+
T Consensus 352 ~~aL~~ 357 (479)
T 1v8b_A 352 VNELFN 357 (479)
T ss_dssp HHHHHT
T ss_pred chhhhc
Confidence 776665
No 31
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.11 E-value=0.22 Score=53.62 Aligned_cols=182 Identities=14% Similarity=0.122 Sum_probs=120.7
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCch--HHHHHHHHhcc--C--cee----------ccCcchhHHHHHH
Q 009519 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR--F--CMF----------NDDIQGTAGVALA 305 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~--af~iL~ryr~~--~--~~F----------nDDiQGTaaV~LA 305 (533)
.+..|...|...||+.+.+.. |..-|-=+|++..- ---+.++|+.. . .|+ .++-.-||-=+.-
T Consensus 158 ~S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~ 237 (470)
T 2bma_A 158 KSDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVY 237 (470)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHH
Confidence 356677778888888888654 77788889998742 22355666531 1 111 1222346666666
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccCccccCCCCCChhh---
Q 009519 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA--- 381 (533)
Q Consensus 306 gli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~-lvD~~GLi~~~r~~l~~~k--- 381 (533)
++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .++..+
T Consensus 238 ~~~~~l~~~G~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~-Gid~edl~~ 301 (470)
T 2bma_A 238 FVLEVLKSLNIPVEK---QTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN-GFTHENLEF 301 (470)
T ss_dssp HHHHHHHTTTCCGGG---CEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS-CCCHHHHHH
T ss_pred HHHHHHHhccCCcCC---CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC-CCCHHHHHH
Confidence 777888888988888 9999999999999999999764 32 455 899999988754 343321
Q ss_pred ------------hccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 382 ------------APFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 382 ------------~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
..|+...+ +. ...+-.+.. .++.||||=+.. ++.+|++-++.+.+ +.-.||.--+| |+.
T Consensus 302 l~~~k~~~~g~v~~~~~~~~---~a-~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T 373 (470)
T 2bma_A 302 LIDLKEEKKGRIKEYLNHSS---TA-KYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK--NGCILVGEGANMPST 373 (470)
T ss_dssp HHHHHTTTTCCGGGGGGTCS---SC-EECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHHhcCCcHHHHHhhcC---Cc-EEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh--cCcEEEEeCCCCCCC
Confidence 11211000 00 000001222 568999998875 79999999999943 56679999999 653
No 32
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.94 E-value=0.017 Score=59.14 Aligned_cols=114 Identities=14% Similarity=0.176 Sum_probs=74.9
Q ss_pred HHHHHHHHHHH---------hCCCCCCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcccc
Q 009519 303 ALAGLLGTVRA---------QGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITK 372 (533)
Q Consensus 303 ~LAgli~Alr~---------~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~ 372 (533)
|-.|.+-.++. .|.+++. .++||+|+|. .|.-+|.++... | .+++++|++..-..
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~g---k~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~ 215 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYG---KKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKF 215 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTT---CEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEE
T ss_pred cHHHHHHHHHhhcccccccccCCCCCC---CEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHH
Confidence 33444566665 5767777 9999999995 599988888653 3 26899998755444
Q ss_pred CCC-CCChhhhccccccCCcCCccCC--CCHHHHhcccCCcEEEEeccCCCC-CCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 373 ERK-NLDPAAAPFAKDPGDFMGLREG--ASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 373 ~r~-~l~~~k~~~A~~~~~~~~~~~~--~~L~e~V~~vkptvLIG~S~~~g~-Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
.|. .+... ++..... ... .+|.++++. +|++|+..+.++. ++.++|+ +.-+|+-++-|-
T Consensus 216 ~ra~~la~~----~~~~t~~---~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk-------~GavVIDVgi~r 278 (320)
T 1edz_A 216 TRGESLKLN----KHHVEDL---GEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK-------EGAVCINFACTK 278 (320)
T ss_dssp ESCCCSSCC----CCEEEEE---EECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC-------TTEEEEECSSSC
T ss_pred hHHHHHhhh----ccccccc---ccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC-------CCeEEEEcCCCc
Confidence 442 23210 1110000 001 469999999 9999999998887 9998864 234666676654
No 33
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.73 E-value=0.58 Score=48.46 Aligned_cols=167 Identities=19% Similarity=0.198 Sum_probs=106.4
Q ss_pred CChhhhhHhHHHHHHHHHHhCCCceeeeecCCCch--HHHHHHHHhcc--Cc-ee---ccCcchhHHHHHHHHHHHHHHh
Q 009519 243 LEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKW--AFETLERYRKR--FC-MF---NDDIQGTAGVALAGLLGTVRAQ 314 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~P~~~I~~EDf~~~~--af~iL~ryr~~--~~-~F---nDDiQGTaaV~LAgli~Alr~~ 314 (533)
++..+-++++..|.+++..+... -|-=+|++..- --.+.++|+-- -| .+ .|--.-||-=+.-++-.+++..
T Consensus 90 ~s~~~~e~~~r~~~~~~~~l~g~-~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 90 IDPSTWARILRIHAENIDKLSGN-YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTS-EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cChhhHHHHHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 44456667888888888887522 56778987643 22355555521 11 11 1111236666666777888888
Q ss_pred CC-CCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCC
Q 009519 315 GL-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG 393 (533)
Q Consensus 315 g~-~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~ 393 (533)
|. +|+. .+++|.|.|..|..+|+.+... |. +|++.|++ .....+++...
T Consensus 169 G~~~L~G---ktV~I~G~GnVG~~~A~~l~~~-----Ga-------kVvvsD~~-----------~~~~~~a~~~g---- 218 (355)
T 1c1d_A 169 GLGSLDG---LTVLVQGLGAVGGSLASLAAEA-----GA-------QLLVADTD-----------TERVAHAVALG---- 218 (355)
T ss_dssp TCCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT----
T ss_pred CCCCCCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------ccHHHHHHhcC----
Confidence 87 7777 9999999999999999987654 43 67788864 11122332110
Q ss_pred ccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 394 LREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 394 ~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
....++.|+.+ ++.|+|+=.. ..+.++++-++.| .-.||.--+| |+.
T Consensus 219 -a~~v~~~ell~-~~~DIliP~A-~~~~I~~~~~~~l-----k~~iVie~AN~p~t 266 (355)
T 1c1d_A 219 -HTAVALEDVLS-TPCDVFAPCA-MGGVITTEVARTL-----DCSVVAGAANNVIA 266 (355)
T ss_dssp -CEECCGGGGGG-CCCSEEEECS-CSCCBCHHHHHHC-----CCSEECCSCTTCBC
T ss_pred -CEEeChHHhhc-CccceecHhH-HHhhcCHHHHhhC-----CCCEEEECCCCCCC
Confidence 01123444443 4689999554 5789999999999 2468888888 653
No 34
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.40 E-value=0.11 Score=51.29 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=72.0
Q ss_pred HHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCC
Q 009519 311 VRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGD 390 (533)
Q Consensus 311 lr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~ 390 (533)
++..+..+.. .+++|+|+|..|..+|+.+... |. +++.+|+.- .+ +.. ++.....
T Consensus 148 ~~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~--~~~----~~~~g~~ 202 (300)
T 2rir_A 148 IQHTDYTIHG---SQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH--LAR----ITEMGLV 202 (300)
T ss_dssp HHTCSSCSTT---SEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH--HHH----HHHTTCE
T ss_pred HHhcCCCCCC---CEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH--HHH----HHHCCCe
Confidence 3445677777 9999999999999999988653 43 688888741 11 110 1110000
Q ss_pred cCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHH
Q 009519 391 FMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADA 457 (533)
Q Consensus 391 ~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A 457 (533)
. ....+|.|+++. .|++|-... .+.++++.++.|. +..+|+=+|.-.. +|..+.+
T Consensus 203 ~---~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk----~g~~lin~a~g~~--~~~~~~a 257 (300)
T 2rir_A 203 P---FHTDELKEHVKD--IDICINTIP-SMILNQTVLSSMT----PKTLILDLASRPG--GTDFKYA 257 (300)
T ss_dssp E---EEGGGHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC----TTCEEEECSSTTC--SBCHHHH
T ss_pred E---EchhhHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC----CCCEEEEEeCCCC--CcCHHHH
Confidence 0 012468888876 899997665 5899999988883 5778888886322 3545444
No 35
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.32 E-value=0.044 Score=55.31 Aligned_cols=144 Identities=15% Similarity=0.214 Sum_probs=93.6
Q ss_pred HHHHHHHHHhC--CCc---eeeeecCCCchHHHHHHHHhc--cCceecc--------CcchhHHHHHHHHHHHHHHhCCC
Q 009519 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYRK--RFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (533)
Q Consensus 253 defv~av~~~~--P~~---~I~~EDf~~~~af~iL~ryr~--~~~~FnD--------DiQGTaaV~LAgli~Alr~~g~~ 317 (533)
+|+.+.+.++- |++ ++|+==.+.-+..++++.-.- .+=.||. ...+-.-+|-.|++-.++..+.+
T Consensus 76 ~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 155 (281)
T 2c2x_A 76 ATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDIS 155 (281)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHTCCCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 45555555554 543 666644444444455544321 1222221 01233445677788888999988
Q ss_pred CCCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccC
Q 009519 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (533)
Q Consensus 318 l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~ 396 (533)
++. .++|++|+|. .|.-+|.+|.... .| ..+++++++
T Consensus 156 l~g---k~vvVvG~s~iVG~p~A~lL~~~g---~~-------atVtv~h~~----------------------------- 193 (281)
T 2c2x_A 156 IAG---AHVVVIGRGVTVGRPLGLLLTRRS---EN-------ATVTLCHTG----------------------------- 193 (281)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHTSTT---TC-------CEEEEECTT-----------------------------
T ss_pred CCC---CEEEEECCCcHHHHHHHHHHhcCC---CC-------CEEEEEECc-----------------------------
Confidence 888 9999999996 5888888876420 02 367777431
Q ss_pred CCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
..+|.+.++. +|++|+..+.++.+++|+|+ +.-+|+=++-|-
T Consensus 194 t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~r 235 (281)
T 2c2x_A 194 TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR-------PGAAVIDVGVSR 235 (281)
T ss_dssp CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC-------TTCEEEECCEEE
T ss_pred hhHHHHHHhh--CCEEEECCCCCcccCHHHcC-------CCcEEEEccCCC
Confidence 1348999988 99999999999999999875 345788777553
No 36
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.23 E-value=0.54 Score=49.75 Aligned_cols=184 Identities=16% Similarity=0.181 Sum_probs=119.5
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCch--HHHHHHHHhc---c--Cceec----------cCcchhHHHHH
Q 009519 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRK---R--FCMFN----------DDIQGTAGVAL 304 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~--af~iL~ryr~---~--~~~Fn----------DDiQGTaaV~L 304 (533)
.+.+|-..+...|++++...- |..-|-=+|++..- --.+.++|+. . ..++- +.-.-||-=+.
T Consensus 114 ~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 193 (415)
T 2tmg_A 114 LSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVK 193 (415)
T ss_dssp SCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHH
Confidence 345677788999999998877 77788889998752 2235566643 1 12332 22234666666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccCccccCCCCCChhh-h
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 382 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~-lvD~~GLi~~~r~~l~~~k-~ 382 (533)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+ +.|. +++ +.|++|-+++.. .|+..+ .
T Consensus 194 ~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~e----~~Ga-------kvVavsD~~G~i~dp~-Gld~~~l~ 258 (415)
T 2tmg_A 194 VCAGLAMDVLGIDPKK---ATVAVQGFGNVGQFAALLISQ----ELGS-------KVVAVSDSRGGIYNPE-GFDVEELI 258 (415)
T ss_dssp HHHHHHHHHTTCCTTT---CEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHcCCCcCC---CEEEEECCcHHHHHHHHHHHH----hcCC-------EEEEEEeCCCeEECCC-CCCHHHHH
Confidence 6777888888988887 999999999999999988865 1343 455 999999988764 343321 1
Q ss_pred ccccccCCcCCcc--CCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 383 PFAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 383 ~~A~~~~~~~~~~--~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
.+......+.+.. ...+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+.
T Consensus 259 ~~~~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l-----~ak~V~EgAN~p~t 320 (415)
T 2tmg_A 259 RYKKEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI-----KAKAVVEGANGPTT 320 (415)
T ss_dssp HHHHHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC-----CCSEEECCSSSCBC
T ss_pred HHHHhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc-----CCeEEEeCCCcccC
Confidence 1111111111000 1113344 45578999997775 688999888877 3458888888 653
No 37
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.96 E-value=0.25 Score=53.28 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=76.1
Q ss_pred HHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCc
Q 009519 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (533)
Q Consensus 312 r~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~ 391 (533)
|.++..+.. .+|+|+|+|..|.++|+.+... |. +++.+|++ +.+...|+...
T Consensus 266 r~~~~~l~G---ktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~-----------~~~~~~A~~~G-- 317 (494)
T 3ce6_A 266 RGTDALIGG---KKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEID-----------PINALQAMMEG-- 317 (494)
T ss_dssp HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT--
T ss_pred hccCCCCCc---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------HHHHHHHHHcC--
Confidence 345656667 9999999999999999887653 42 68888763 22222332210
Q ss_pred CCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhc
Q 009519 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (533)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~ 459 (533)
....++.|+++. .|++|-+.+..++++++.++.|. +.-+|.-.+.... |+..+..+.
T Consensus 318 ---a~~~~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk----~ggilvnvG~~~~--eId~~aL~~ 374 (494)
T 3ce6_A 318 ---FDVVTVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK----DHAILGNIGHFDN--EIDMAGLER 374 (494)
T ss_dssp ---CEECCHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC----TTCEEEECSSSGG--GBCHHHHHH
T ss_pred ---CEEecHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC----CCcEEEEeCCCCC--ccCHHHHHH
Confidence 012468888876 89999888878899999999994 5677777777653 676665543
No 38
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.92 E-value=0.11 Score=56.02 Aligned_cols=111 Identities=20% Similarity=0.267 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCC
Q 009519 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL 377 (533)
Q Consensus 298 GTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l 377 (533)
|+......|+ .+.+|..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~-------- 311 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAG---KIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI-------- 311 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH--------
T ss_pred hhhhhhhhhh---hhccccccCC---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH--------
Confidence 3333444552 3567888888 9999999999999999988654 43 6888887421
Q ss_pred ChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 378 DPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 378 ~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
... ..+... ....+|.|+++. .|++|......++++++.++.|. +..||.=.+....
T Consensus 312 -~~~-~a~~~G------~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gAilINvgrg~v 368 (494)
T 3d64_A 312 -CAL-QAAMEG------YRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR----HNAIVCNIGHFDS 368 (494)
T ss_dssp -HHH-HHHTTT------CEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC----TTEEEEECSSSSC
T ss_pred -hHH-HHHHcC------CEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC----CCcEEEEcCCCcc
Confidence 000 001100 012469999987 99999987668999999999993 5778887887544
No 39
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.88 E-value=0.49 Score=49.32 Aligned_cols=141 Identities=18% Similarity=0.169 Sum_probs=99.2
Q ss_pred CCCc-eeeeecCCCchHHHHHHHHh-ccCceeccCcc---hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHH
Q 009519 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLG 337 (533)
Q Consensus 263 ~P~~-~I~~EDf~~~~af~iL~ryr-~~~~~FnDDiQ---GTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~G 337 (533)
.|+. .|+--..+..|- .+ +..+ ..+++.|.--- .+|=-+++.+++..|..|..|.+ .+|.|+|.|..|..
T Consensus 56 ~~~Lk~I~~~~~G~D~i-D~-~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g---~tvGIIGlG~IG~~ 130 (380)
T 2o4c_A 56 GSPVRFVGTCTIGTDHL-DL-DYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAE---RTYGVVGAGQVGGR 130 (380)
T ss_dssp TSCCCEEEECSSCSTTB-CH-HHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGG---CEEEEECCSHHHHH
T ss_pred CCCceEEEEcCcccchh-hH-HHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCC---CEEEEEeCCHHHHH
Confidence 4887 888888887773 11 2222 34888886433 34445899999999999988888 99999999999999
Q ss_pred HHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEec-
Q 009519 338 VLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS- 416 (533)
Q Consensus 338 iA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S- 416 (533)
+|+.+... |+ +++.+|+..- +.. .. ....+|.|+++. .|+++=.-
T Consensus 131 vA~~l~~~-----G~-------~V~~~d~~~~-----------~~~---~g------~~~~~l~ell~~--aDvV~l~~P 176 (380)
T 2o4c_A 131 LVEVLRGL-----GW-------KVLVCDPPRQ-----------ARE---PD------GEFVSLERLLAE--ADVISLHTP 176 (380)
T ss_dssp HHHHHHHT-----TC-------EEEEECHHHH-----------HHS---TT------SCCCCHHHHHHH--CSEEEECCC
T ss_pred HHHHHHHC-----CC-------EEEEEcCChh-----------hhc---cC------cccCCHHHHHHh--CCEEEEecc
Confidence 99988754 43 6888886321 000 00 013579999987 89987532
Q ss_pred --c-----CCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 009519 417 --G-----VGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (533)
Q Consensus 417 --~-----~~g~Fteevv~~Ma~~~~erPIIFaLSNP 446 (533)
. ..+.|+++.++.|. +..++.=.|.-
T Consensus 177 lt~~g~~~T~~li~~~~l~~mk----~gailIN~sRG 209 (380)
T 2o4c_A 177 LNRDGEHPTRHLLDEPRLAALR----PGTWLVNASRG 209 (380)
T ss_dssp CCSSSSSCCTTSBCHHHHHTSC----TTEEEEECSCG
T ss_pred CccccccchhhhcCHHHHhhCC----CCcEEEECCCC
Confidence 1 24789999999993 56788877753
No 40
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.71 E-value=0.049 Score=55.20 Aligned_cols=126 Identities=13% Similarity=0.159 Sum_probs=75.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+.|.++|.+|... |+- +++++|.+-=..+. ..++.+...++..+ ... ....++.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~~------~V~L~D~~~~~~~~~~~~l~~~~~~~~~~-~~i---~~t~d~~e 74 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----ELA------DVVLYDVVKGMPEGKALDLSHVTSVVDTN-VSV---RAEYSYEA 74 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHHHHHTTCC-CCE---EEECSHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECChhHHHHHHHHHHhhhhccCCC-CEE---EEeCCHHH
Confidence 5899999999999999988763 431 49999985210000 00111111111111 000 11367988
Q ss_pred HhcccCCcEEEEeccCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--
Q 009519 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-- 461 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~----------------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt-- 461 (533)
++++ .|++|=+.+.| |. +-+++.+.|.+ +++.-+|+=-|||... +.+-+.+.+
T Consensus 75 a~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNP~~~---~t~~~~~~~~~ 148 (331)
T 1pzg_A 75 ALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK-YCPKTFIIVVTNPLDC---MVKVMCEASGV 148 (331)
T ss_dssp HHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH---HHHHHHHHHCC
T ss_pred HhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCchHH---HHHHHHHhcCC
Confidence 9988 89988554333 33 24678888864 7788888888999873 344454544
Q ss_pred CCcEEEecC
Q 009519 462 GENIVFASG 470 (533)
Q Consensus 462 ~Grai~AtG 470 (533)
.-.-+|++|
T Consensus 149 ~~~rviG~g 157 (331)
T 1pzg_A 149 PTNMICGMA 157 (331)
T ss_dssp CGGGEEECC
T ss_pred ChhcEEecc
Confidence 234578886
No 41
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.70 E-value=0.26 Score=48.35 Aligned_cols=124 Identities=11% Similarity=0.131 Sum_probs=73.7
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..||.|+|+|..|.++|..+.. .|... .+|+++|++- +.+...+..| . .....++.|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-----~g~~~----~~V~v~dr~~------~~~~~l~~~~---g-----i~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-----NGYDP----NRICVTNRSL------DKLDFFKEKC---G-----VHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-----TTCCG----GGEEEECSSS------HHHHHHHHTT---C-----CEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHH-----CCCCC----CeEEEEeCCH------HHHHHHHHHc---C-----CEEeCChHH
Confidence 3789999999999999998875 35432 4788888731 1121111111 0 012356888
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhc-CCCCCeEEecCCCCCcccCCHHHHhcccCC-cEEEecCCCCcceecC
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPTMNAECTAADAFKHAGE-NIVFASGSPFENVDLG 479 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~-~~erPIIFaLSNPt~~aE~tpe~A~~wt~G-rai~AtGSPf~pv~~~ 479 (533)
+++. +|++| ++..+ -..+++++.++.. ..++.+|...++..+. +..-+|... ..++- .-|+.|....
T Consensus 60 ~~~~--aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~~-----~~l~~~l~~~~~vvr-~mPn~p~~v~ 128 (280)
T 3tri_A 60 GALN--ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVTT-----PLIEKWLGKASRIVR-AMPNTPSSVR 128 (280)
T ss_dssp HHSS--CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCCH-----HHHHHHHTCCSSEEE-EECCGGGGGT
T ss_pred HHhc--CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCCH-----HHHHHHcCCCCeEEE-EecCChHHhc
Confidence 8887 78876 44333 4567888888643 3566688888887763 333334322 22322 2477777663
No 42
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.64 E-value=0.1 Score=53.19 Aligned_cols=100 Identities=24% Similarity=0.341 Sum_probs=62.5
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCH
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
++..+++|+|||.+|.+++..+... |. +++++|++ ..| +...+..++....-.. ....++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----Ga-------~V~v~dr~----~~r--~~~~~~~~~~~~~~~~--~~~~~~ 224 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----GA-------QVQIFDIN----VER--LSYLETLFGSRVELLY--SNSAEI 224 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC----HHH--HHHHHHHHGGGSEEEE--CCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC----HHH--HHHHHHhhCceeEeee--CCHHHH
Confidence 4458999999999999999887653 42 68888873 111 2222222222100000 011346
Q ss_pred HHHhcccCCcEEEEeccCCCC-----CCHHHHHHhhhcCCCCCeEEecCCC
Q 009519 401 LEVVRKVKPHVLLGLSGVGGV-----FNEEVLKAMRESDSVKPAIFAMSNP 446 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~-----Fteevv~~Ma~~~~erPIIFaLSNP 446 (533)
.+.++. .|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 225 ~~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~----~g~~ivdv~~~ 269 (361)
T 1pjc_A 225 ETAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR----TGSVIVDVAVD 269 (361)
T ss_dssp HHHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC----TTCEEEETTCT
T ss_pred HHHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC----CCCEEEEEecC
Confidence 777775 8999998876553 6888898883 45677777753
No 43
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=93.62 E-value=0.37 Score=49.85 Aligned_cols=137 Identities=21% Similarity=0.313 Sum_probs=76.1
Q ss_pred chHHHHHHHHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChh
Q 009519 276 KWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDA 355 (533)
Q Consensus 276 ~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~ 355 (533)
..++.+-++.+...... .++.+++.+++--+-+..+ ++.. .+++|+|+|..|..++..+... |.
T Consensus 128 ~~a~~~~k~v~~~~~~~----~~~~s~a~~av~~a~~~~~-~l~g---~~VlIiGaG~iG~~~a~~l~~~-----G~--- 191 (404)
T 1gpj_A 128 RRAINLGKRAREETRIS----EGAVSIGSAAVELAERELG-SLHD---KTVLVVGAGEMGKTVAKSLVDR-----GV--- 191 (404)
T ss_dssp HHHHHHHHHHHHHSSTT----CSCCSHHHHHHHHHHHHHS-CCTT---CEEEEESCCHHHHHHHHHHHHH-----CC---
T ss_pred HHHhhhhccCcchhhhc----CCCccHHHHHHHHHHHHhc-cccC---CEEEEEChHHHHHHHHHHHHHC-----CC---
Confidence 34677777766543221 1222233333322222222 3455 8999999999999999888654 43
Q ss_pred hhcCeEEEEeccCccccCCCCCChhh-hccccccC-CcCCccCCCCHHHHhcccCCcEEEEeccCC-CCCCHHHHHH--h
Q 009519 356 FARNKFFLLDKDGLITKERKNLDPAA-APFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGVG-GVFNEEVLKA--M 430 (533)
Q Consensus 356 eA~~~i~lvD~~GLi~~~r~~l~~~k-~~~A~~~~-~~~~~~~~~~L~e~V~~vkptvLIG~S~~~-g~Fteevv~~--M 430 (533)
++|+++|+. ..+ ..+|+.-. .. ....++.++++. .|++|-.++.+ ..++++.++. |
T Consensus 192 ---~~V~v~~r~-----------~~ra~~la~~~g~~~---~~~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~~~l 252 (404)
T 1gpj_A 192 ---RAVLVANRT-----------YERAVELARDLGGEA---VRFDELVDHLAR--SDVVVSATAAPHPVIHVDDVREALR 252 (404)
T ss_dssp ---SEEEEECSS-----------HHHHHHHHHHHTCEE---CCGGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHHHHH
T ss_pred ---CEEEEEeCC-----------HHHHHHHHHHcCCce---ecHHhHHHHhcC--CCEEEEccCCCCceecHHHHHHHHH
Confidence 479988863 111 12332100 00 012357888865 89999776544 4567888887 4
Q ss_pred hhcCCCCCeEEecCCCC
Q 009519 431 RESDSVKPAIFAMSNPT 447 (533)
Q Consensus 431 a~~~~erPIIFaLSNPt 447 (533)
..+...+-+++-++.|-
T Consensus 253 k~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 253 KRDRRSPILIIDIANPR 269 (404)
T ss_dssp HCSSCCCEEEEECCSSC
T ss_pred hccCCCCEEEEEccCCC
Confidence 21122344556666654
No 44
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.13 E-value=1.2 Score=44.67 Aligned_cols=192 Identities=16% Similarity=0.124 Sum_probs=113.8
Q ss_pred hCCCc-eeeeecCCCchHHHHHHHHh-ccCceeccCcch---hHHHHHHHHHHHHHHh----------------CCCCCC
Q 009519 262 RWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ----------------GLSLTD 320 (533)
Q Consensus 262 ~~P~~-~I~~EDf~~~~af~iL~ryr-~~~~~FnDDiQG---TaaV~LAgli~Alr~~----------------g~~l~d 320 (533)
..|+. .|+.--.+..|- . ++..+ .-++|.|----. +|=-+++.+++..|-. +..+..
T Consensus 65 ~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g 142 (313)
T 2ekl_A 65 KGKKLKIIARAGIGLDNI-D-TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAG 142 (313)
T ss_dssp HCTTCCEEEECSSCCTTB-C-HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTT
T ss_pred hCCCCeEEEEcCCCCCcc-C-HHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 45776 787777776663 2 23333 348888854333 3445788888888752 344555
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCH
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
.+|.|+|.|..|..+|+.+... |+ +++.+|+.. ... . +.... ....+|
T Consensus 143 ---~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~~--~-~~~~g-----~~~~~l 190 (313)
T 2ekl_A 143 ---KTIGIVGFGRIGTKVGIIANAM-----GM-------KVLAYDILD---------IRE--K-AEKIN-----AKAVSL 190 (313)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHH--H-HHHTT-----CEECCH
T ss_pred ---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCCc---------chh--H-HHhcC-----ceecCH
Confidence 9999999999999999988754 43 688887631 111 1 11100 012379
Q ss_pred HHHhcccCCcEEEEecc----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEe-----cCC
Q 009519 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-----SGS 471 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~----~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~A-----tGS 471 (533)
.|+++. .|+++=.-- ..+.++++.++.|. +..++.-.|.-..--|..-.+|.+ +|+.--| .+-
T Consensus 191 ~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk----~ga~lIn~arg~~vd~~aL~~aL~--~g~i~ga~lDv~~~e 262 (313)
T 2ekl_A 191 EELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK----DNVIIVNTSRAVAVNGKALLDYIK--KGKVYAYATDVFWNE 262 (313)
T ss_dssp HHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC----TTEEEEESSCGGGBCHHHHHHHHH--TTCEEEEEESCCSSS
T ss_pred HHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC----CCCEEEECCCCcccCHHHHHHHHH--cCCCcEEEEecCCCC
Confidence 999987 898874421 34788899999993 577888888743322323344443 4543212 222
Q ss_pred CCcceecCCCeeeecccccceeechhhhH
Q 009519 472 PFENVDLGNGKIGHVNQANNMYLFPGIGL 500 (533)
Q Consensus 472 Pf~pv~~~~G~~~~p~Q~NN~~iFPGigl 500 (533)
|.+ + .-...--+..|+.+-|=++-
T Consensus 263 P~~----~-~~~~~L~~~~nviltPH~~~ 286 (313)
T 2ekl_A 263 PPK----E-EWELELLKHERVIVTTHIGA 286 (313)
T ss_dssp SCC----S-HHHHHHHHSTTEEECCSCTT
T ss_pred CCC----C-cccchHhhCCCEEECCccCc
Confidence 222 0 10001124578899888763
No 45
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.06 E-value=2.7 Score=44.93 Aligned_cols=186 Identities=14% Similarity=0.128 Sum_probs=117.5
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCchH--HHHHHHHhc---c--Cceecc----------CcchhHHHHHH
Q 009519 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRK---R--FCMFND----------DIQGTAGVALA 305 (533)
Q Consensus 244 ~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~a--f~iL~ryr~---~--~~~FnD----------DiQGTaaV~LA 305 (533)
+..|-..|...||..+.+.. |..-|-=+|++..-. --+.+.|++ . .-|+-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 44677778888888886655 888888999987622 224455543 2 122211 22346665666
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCC-Chhh---
Q 009519 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-DPAA--- 381 (533)
Q Consensus 306 gli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l-~~~k--- 381 (533)
++-.+++..|.+++. .||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.+
T Consensus 216 ~~~~~~~~~G~~l~g---~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~-Gi~d~edi~~ 280 (449)
T 1bgv_A 216 YVEAVMKHENDTLVG---KTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE-GITTEEKINY 280 (449)
T ss_dssp HHHHHHHHTTCCSTT---CEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT-CSCSHHHHHH
T ss_pred HHHHHHHHccCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC-cCCCHHHHHH
Confidence 777888888988887 9999999999999999988765 32 3344799999988754 35 2211
Q ss_pred -hcccccc-CCcCCc-----cCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 382 -APFAKDP-GDFMGL-----REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 382 -~~~A~~~-~~~~~~-----~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
..+.+.. ..+.+. ....+-.+. -.++.|+|+=+.. ++.+|++-++.+.+ |.-.||.--+| |+.
T Consensus 281 l~~~k~~~~g~v~~y~~~~~a~~i~~~e~-~~~~~Dil~P~A~-~~~I~~~na~~l~a--~g~kiV~EgAN~p~T 351 (449)
T 1bgv_A 281 MLEMRASGRNKVQDYADKFGVQFFPGEKP-WGQKVDIIMPCAT-QNDVDLEQAKKIVA--NNVKYYIEVANMPTT 351 (449)
T ss_dssp HHHHHHHCCCCTHHHHHHHTCEEEETCCG-GGSCCSEEECCSC-TTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhccCCChhhcccccCCEEeCchhh-hcCCcceeecccc-ccccchhhHHHHHh--cCCeEEEeCCCCcCC
Confidence 0111000 000000 000000112 2468999997774 79999999999953 34579998898 654
No 46
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.93 E-value=0.11 Score=52.10 Aligned_cols=158 Identities=17% Similarity=0.169 Sum_probs=91.7
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcc
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~ 384 (533)
.|++.+|+..|.+++. .+++|+|||.+|.+++..|.+. |. ++|+++++. .++ -+.+
T Consensus 107 ~G~~~~L~~~~~~~~~---k~vlvlGaGGaaraia~~L~~~-----G~------~~v~v~nRt----~~k------a~~L 162 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKN---NICVVLGSGGAARAVLQYLKDN-----FA------KDIYVVTRN----PEK------TSEI 162 (282)
T ss_dssp HHHHHHHHHTTCCCTT---SEEEEECSSTTHHHHHHHHHHT-----TC------SEEEEEESC----HHH------HHHH
T ss_pred HHHHHHHHHcCCCccC---CEEEEECCcHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHH------HHHH
Confidence 6889999988888888 9999999999988888877653 44 589999873 111 1122
Q ss_pred ccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCC--------CCHHHHHHhhhcCCCCCeEEecC-CCCCcccCCH-
Q 009519 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGV--------FNEEVLKAMRESDSVKPAIFAMS-NPTMNAECTA- 454 (533)
Q Consensus 385 A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~--------Fteevv~~Ma~~~~erPIIFaLS-NPt~~aE~tp- 454 (533)
|..-. ..++.+.-+ +++|++|-++.. |. +..+.+ .+..+||=+. ||.+ |+
T Consensus 163 a~~~~-------~~~~~~l~~-l~~DivInaTp~-Gm~~~~~~~pi~~~~l-------~~~~~v~DlvY~P~~----T~l 222 (282)
T 3fbt_A 163 YGEFK-------VISYDELSN-LKGDVIINCTPK-GMYPKEGESPVDKEVV-------AKFSSAVDLIYNPVE----TLF 222 (282)
T ss_dssp CTTSE-------EEEHHHHTT-CCCSEEEECSST-TSTTSTTCCSSCHHHH-------TTCSEEEESCCSSSS----CHH
T ss_pred HHhcC-------cccHHHHHh-ccCCEEEECCcc-CccCCCccCCCCHHHc-------CCCCEEEEEeeCCCC----CHH
Confidence 22110 011222222 269999977653 32 344433 2567888765 8753 44
Q ss_pred -HHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCC
Q 009519 455 -ADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNE 529 (533)
Q Consensus 455 -e~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~ 529 (533)
.+|.+ .|. -+.. |......|+--++ -+-.+ .+.+.+.+.++.+.+...+..|
T Consensus 223 l~~A~~--~G~-~~~~-----------Gl~MLv~Qa~~~f--------~lwtg-~~~~~~~~~~~~~~~~~~~~~~ 275 (282)
T 3fbt_A 223 LKYARE--SGV-KAVN-----------GLYMLVSQAAASE--------EIWND-ISIDEIIVDEIFEVLEEKIKSE 275 (282)
T ss_dssp HHHHHH--TTC-EEEC-----------SHHHHHHHHHHHH--------HHHHT-CCCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHH--CcC-eEeC-----------cHHHHHHHHHHHH--------HHHcC-CCCCHHHHHHHHHHHHHhhhcc
Confidence 34433 442 2333 4555555543211 11112 3567777777777777665544
No 47
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.85 E-value=0.12 Score=51.52 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhc
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~ 383 (533)
-.|++.+++..+.+++. .+++|+|||.+|.+++..|.+ .|. ++|+++|+. .++ .......
T Consensus 111 ~~G~~~~l~~~~~~l~~---k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~--a~~la~~ 170 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKL---DSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR--AQALADV 170 (283)
T ss_dssp HHHHHHHHHHHCTTCCC---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH--HHHHHHH
T ss_pred HHHHHHHHHHhCcCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH--HHHHHHH
Confidence 35788888888887877 999999999887777776665 354 579988773 111 1111111
Q ss_pred cccccC--CcCCccCCCCHHHHhcccCCcEEEEeccC
Q 009519 384 FAKDPG--DFMGLREGASLLEVVRKVKPHVLLGLSGV 418 (533)
Q Consensus 384 ~A~~~~--~~~~~~~~~~L~e~V~~vkptvLIG~S~~ 418 (533)
+..... .... ....+|.++++. +|++|-++..
T Consensus 171 ~~~~~~~~~i~~-~~~~~l~~~l~~--~DiVInaTp~ 204 (283)
T 3jyo_A 171 INNAVGREAVVG-VDARGIEDVIAA--ADGVVNATPM 204 (283)
T ss_dssp HHHHHTSCCEEE-ECSTTHHHHHHH--SSEEEECSST
T ss_pred HHhhcCCceEEE-cCHHHHHHHHhc--CCEEEECCCC
Confidence 211100 0000 012468888887 8999987753
No 48
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.81 E-value=0.18 Score=48.26 Aligned_cols=106 Identities=16% Similarity=0.246 Sum_probs=61.6
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc--ccCC-CCCCh-hhhccccccCCcCCccC
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI--TKER-KNLDP-AAAPFAKDPGDFMGLRE 396 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi--~~~r-~~l~~-~k~~~A~~~~~~~~~~~ 396 (533)
+...||.|+|+|..|.++|..|... |. +++++|++--- .+.. ..+.. ....++..... ..
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~-----G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 80 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL-----GH-------EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH----VH 80 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCHHHHHTCC-------CCHHHHGGGSTT----CE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc----ee
Confidence 3349999999999999999998764 42 68888874211 0000 00000 01122221100 12
Q ss_pred CCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHh-hhcCCCCCeEEecCCCC
Q 009519 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM-RESDSVKPAIFAMSNPT 447 (533)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~M-a~~~~erPIIFaLSNPt 447 (533)
..++.|+++. +|++| ++. +.....++++.+ +... +..||.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lav-p~~~~~~~~~~i~~~~l-~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NAT-EGASSIAALTAAGAENL-AGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECS-CGGGHHHHHHHHCHHHH-TTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-Ecc-CcHHHHHHHHHhhhhhc-CCCEEEECCCCC
Confidence 3578999988 89877 443 333445666665 3323 677999999985
No 49
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.78 E-value=0.13 Score=52.31 Aligned_cols=50 Identities=18% Similarity=0.397 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-.|++.+++..+.+++. .+++|+|||.+|.+||..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~g---k~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIG---KKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTT---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccC---CEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 35688888888888888 999999999877777777665 354 589999885
No 50
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.76 E-value=0.52 Score=49.74 Aligned_cols=114 Identities=21% Similarity=0.248 Sum_probs=78.9
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCchH--HHHHHHHhc---cC-c---eeccC----------cchhHHH
Q 009519 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRK---RF-C---MFNDD----------IQGTAGV 302 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~a--f~iL~ryr~---~~-~---~FnDD----------iQGTaaV 302 (533)
.+.+|...+...|++++...- |..-|-=+|++..-. -.+.+.|.. .. + ++--+ -.-||-=
T Consensus 114 ~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 114 LSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 345677788999999998877 777888899987411 123455533 21 2 33322 2236666
Q ss_pred HHHHHHHHHHHhCCC-CCCCCCceEEEeCchhHHHHHHHHHHH-HHHHHcCCChhhhcCeEEEE-eccCccc
Q 009519 303 ALAGLLGTVRAQGLS-LTDFADQKIVVVGAGSAGLGVLKMAVQ-AAARMAGNNDAFARNKFFLL-DKDGLIT 371 (533)
Q Consensus 303 ~LAgli~Alr~~g~~-l~dl~~~riv~~GAGsAg~GiA~ll~~-~~~~~~Gls~~eA~~~i~lv-D~~GLi~ 371 (533)
+.-++-.+++..|.+ |+. .++.|+|.|..|..+|+++.. . |+ +++.+ |+.|-+.
T Consensus 194 v~~~~~~~~~~~G~~~l~g---ktvgI~G~G~VG~~vA~~l~~~~-----G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKG---KTIAIQGYGNAGYYLAKIMSEDF-----GM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTT---CEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCC---CEEEEEcCCHHHHHHHHHHHHhc-----CC-------EEEEEeCCCcccc
Confidence 666778888888988 777 999999999999999998865 4 43 45544 7876443
No 51
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.72 E-value=0.33 Score=49.54 Aligned_cols=101 Identities=22% Similarity=0.349 Sum_probs=59.6
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCC
Q 009519 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
++...+++|+|+|..|..+|+.+... |. +++++|++- .+ +...+..+.... ... .....+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~~----~~--~~~~~~~~g~~~-~~~-~~~~~~ 222 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVNH----KR--LQYLDDVFGGRV-ITL-TATEAN 222 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH--HHHHHHHTTTSE-EEE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH--HHHHHHhcCceE-EEe-cCCHHH
Confidence 34559999999999999999887653 42 688888741 11 111111111100 000 001235
Q ss_pred HHHHhcccCCcEEEEeccCCC-----CCCHHHHHHhhhcCCCCCeEEecCCC
Q 009519 400 LLEVVRKVKPHVLLGLSGVGG-----VFNEEVLKAMRESDSVKPAIFAMSNP 446 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g-----~Fteevv~~Ma~~~~erPIIFaLSNP 446 (533)
+.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 223 l~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk----~gg~iV~v~~~ 268 (369)
T 2eez_A 223 IKKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK----EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHHH--CSEEEECCC-------CCSCHHHHTTSC----TTCEEEECC--
T ss_pred HHHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc----CCCEEEEEecC
Confidence 7888876 899998876543 47899999993 34566666643
No 52
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.68 E-value=0.13 Score=52.27 Aligned_cols=49 Identities=20% Similarity=0.460 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.|++.+++..+.++++ .+++|+|||.+|.+|+..|.+. |. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~g---k~~lVlGAGGaaraia~~L~~~-----G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRG---KTMVLLGAGGAATAIGAQAAIE-----GI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 4678888877888888 9999999998888887777653 54 589999873
No 53
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.59 E-value=0.23 Score=48.68 Aligned_cols=145 Identities=19% Similarity=0.269 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHhC-------CC--ceeeeecCCCchHHHHH--HHHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCC
Q 009519 251 IVDEFMEAVHARW-------PK--AIVQFEDFQMKWAFETL--ERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLT 319 (533)
Q Consensus 251 ~vdefv~av~~~~-------P~--~~I~~EDf~~~~af~iL--~ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~ 319 (533)
.+++|++.++.-| |. ..+.+=|- ++.|..+= +....+ .=+|=|-. |++.+++..
T Consensus 41 ~l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~~--------G~~~~l~~~----- 105 (253)
T 3u62_A 41 SFDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDWV--------GVVKSLEGV----- 105 (253)
T ss_dssp GHHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHHH--------HHHHHTTTC-----
T ss_pred HHHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchHH--------HHHHHHHhc-----
Confidence 3677777776333 32 24555565 66665541 000001 33455543 577777643
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCC
Q 009519 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
++.. |++|+|||.+|.+++..|.+. |. ++|+++|+. .++ -+.+++.-.. ....+
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~-----G~------~~I~v~nR~----~~k------a~~la~~~~~----~~~~~ 159 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQM-----GV------KDIWVVNRT----IER------AKALDFPVKI----FSLDQ 159 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESC----HHH------HHTCCSSCEE----EEGGG
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHH------HHHHHHHccc----CCHHH
Confidence 3456 999999999999998887653 54 579999883 111 1122221100 01245
Q ss_pred HHHHhcccCCcEEEEeccCC-----CCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 400 LLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~-----g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
+.++++. +|++|-++..+ ..+.++.+ .+..+|+-++-
T Consensus 160 ~~~~~~~--aDiVInatp~gm~p~~~~i~~~~l-------~~~~~V~Divy 201 (253)
T 3u62_A 160 LDEVVKK--AKSLFNTTSVGMKGEELPVSDDSL-------KNLSLVYDVIY 201 (253)
T ss_dssp HHHHHHT--CSEEEECSSTTTTSCCCSCCHHHH-------TTCSEEEECSS
T ss_pred HHhhhcC--CCEEEECCCCCCCCCCCCCCHHHh-------CcCCEEEEeeC
Confidence 7888877 89999665421 13444332 25678877653
No 54
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.45 E-value=0.14 Score=50.90 Aligned_cols=48 Identities=27% Similarity=0.507 Sum_probs=39.6
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.|++.+++..|.+++. .|++++|||-|+.+|+-.|.+. |. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~---~~~lilGaGGaarai~~aL~~~-----g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAG---KRALVIGCGGVGSAIAYALAEA-----GI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECS
T ss_pred HHHHHHHHHhCCCccc---CeEEEEecHHHHHHHHHHHHHh-----CC------CeEEEeCC
Confidence 3477888888888888 9999999999999998877654 43 58999986
No 55
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.41 E-value=0.12 Score=51.43 Aligned_cols=99 Identities=23% Similarity=0.233 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhCCCc-eeeeecCCCchHHHHHHHHhcc------C-c-eeccC--cchhHHHHHHHHHHHHHHhCCCCCC
Q 009519 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-C-MFNDD--IQGTAGVALAGLLGTVRAQGLSLTD 320 (533)
Q Consensus 252 vdefv~av~~~~P~~-~I~~EDf~~~~af~iL~ryr~~------~-~-~FnDD--iQGTaaV~LAgli~Alr~~g~~l~d 320 (533)
++++++.++. +++ +++.--=-...+++++++.-+. + + ++++| ..|.-.= -.|++.+|+..+.++++
T Consensus 50 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~~ 126 (281)
T 3o8q_A 50 FTEAAKHFFA--QGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLKG 126 (281)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHh--CCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCccC
Confidence 5667776664 232 5544332334455555554332 1 2 34444 3341111 35788888888888888
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 127 ---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 127 ---ATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred ---CEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 999999999888887777654 354 479999873
No 56
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=92.28 E-value=0.64 Score=48.58 Aligned_cols=137 Identities=16% Similarity=0.165 Sum_probs=93.4
Q ss_pred cCceeccCc---chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEE
Q 009519 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLL 364 (533)
Q Consensus 288 ~~~~FnDDi---QGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lv 364 (533)
-+.+.|--- +.+|=-+++.+++..|..|..|.+ .++.|+|.|..|..+|+.+... |+ +++.+
T Consensus 84 gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~g---ktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~ 148 (381)
T 3oet_A 84 GIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRD---RTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLC 148 (381)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEE
T ss_pred CEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCC---CEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEE
Confidence 366666532 345556899999999999988888 9999999999999999998764 44 68888
Q ss_pred eccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEecc--------CCCCCCHHHHHHhhhcCCC
Q 009519 365 DKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG--------VGGVFNEEVLKAMRESDSV 436 (533)
Q Consensus 365 D~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~--------~~g~Fteevv~~Ma~~~~e 436 (533)
|+.. . ... .. ....+|.|+++. .|+++=.-- ..+.|+++.++.|. +
T Consensus 149 d~~~----~-------~~~---~~------~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk----~ 202 (381)
T 3oet_A 149 DPPR----A-------ARG---DE------GDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK----P 202 (381)
T ss_dssp CHHH----H-------HTT---CC------SCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC----T
T ss_pred CCCh----H-------Hhc---cC------cccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC----C
Confidence 7621 0 000 00 123579999988 898874321 35789999999993 6
Q ss_pred CCeEEecCCCCCcccCCHHHHhcccCCcEEE
Q 009519 437 KPAIFAMSNPTMNAECTAADAFKHAGENIVF 467 (533)
Q Consensus 437 rPIIFaLSNPt~~aE~tpe~A~~wt~Grai~ 467 (533)
..|+.=.|.-..--|-.-.+|++ +|+.-.
T Consensus 203 gailIN~aRG~vvde~aL~~aL~--~g~i~g 231 (381)
T 3oet_A 203 GAILINACRGPVVDNAALLARLN--AGQPLS 231 (381)
T ss_dssp TEEEEECSCGGGBCHHHHHHHHH--TTCCEE
T ss_pred CcEEEECCCCcccCHHHHHHHHH--hCCCeE
Confidence 78888888754422333334444 555443
No 57
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.27 E-value=0.28 Score=50.84 Aligned_cols=159 Identities=14% Similarity=0.155 Sum_probs=95.0
Q ss_pred hHhHHHHHHHHHHhCCCceeeeecCCCchHHHHHHHHhccCcee-cc---------CcchhHHHHHHHHHHHHHHh-CC-
Q 009519 249 LSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMF-ND---------DIQGTAGVALAGLLGTVRAQ-GL- 316 (533)
Q Consensus 249 ~~~vdefv~av~~~~P~~~I~~EDf~~~~af~iL~ryr~~~~~F-nD---------DiQGTaaV~LAgli~Alr~~-g~- 316 (533)
++++..|.+++..+... .|-=+|++..- +.+...-+++.++ -- ----||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~-~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~ 169 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR-YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSD 169 (364)
T ss_dssp HHHHHHHHHHHHTTTTS-EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHhcCc-eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhcccc
Confidence 45677777777777632 56777887543 2444444444211 11 11235444455556666653 65
Q ss_pred CCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccC
Q 009519 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (533)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~ 396 (533)
+|+. .+|+|.|+|..|..+|+.+.+. |. ++++.|++ .+.+..+...| ...
T Consensus 170 ~L~G---ktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~~~l~~~a~~~---ga~------ 219 (364)
T 1leh_A 170 SLEG---LAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------KAAVSAAVAEE---GAD------ 219 (364)
T ss_dssp CCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------HHHHHHHHHHH---CCE------
T ss_pred CCCc---CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------HHHHHHHHHHc---CCE------
Confidence 6777 9999999999999999998764 43 57788852 11122222222 100
Q ss_pred CCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 009519 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (533)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt 447 (533)
..++.+... .+.|++|=+. ..+.++++.++.| .-.+|.--+| |+
T Consensus 220 ~v~~~~ll~-~~~DIvip~a-~~~~I~~~~~~~l-----g~~iV~e~An~p~ 264 (364)
T 1leh_A 220 AVAPNAIYG-VTCDIFAPCA-LGAVLNDFTIPQL-----KAKVIAGSADNQL 264 (364)
T ss_dssp ECCGGGTTT-CCCSEEEECS-CSCCBSTTHHHHC-----CCSEECCSCSCCB
T ss_pred EEChHHHhc-cCCcEeeccc-hHHHhCHHHHHhC-----CCcEEEeCCCCCc
Confidence 112233222 5689999654 5789999988888 2467776777 54
No 58
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.15 E-value=0.96 Score=49.05 Aligned_cols=185 Identities=18% Similarity=0.264 Sum_probs=116.2
Q ss_pred CCChhhhhHhHHHHHHHHHH-hC--CCceeeeecCCCchH--HHHHHHHhccC---------ceeccC---------cch
Q 009519 242 RLEGEEYLSIVDEFMEAVHA-RW--PKAIVQFEDFQMKWA--FETLERYRKRF---------CMFNDD---------IQG 298 (533)
Q Consensus 242 R~~g~eY~~~vdefv~av~~-~~--P~~~I~~EDf~~~~a--f~iL~ryr~~~---------~~FnDD---------iQG 298 (533)
..+..|-..+...||+.+.+ .+ |..-|-=+|++..-. --+.+.|+... |+--.- -.-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 34677888999999999885 23 788888899987532 24778886431 111111 123
Q ss_pred hHHHHHHHHHH------HHHHhCC--CCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 299 TAGVALAGLLG------TVRAQGL--SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 299 TaaV~LAgli~------Alr~~g~--~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
||-=+.-++-. +++..|. .|+. .||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g---~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~i 280 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGD---KTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSI 280 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEE
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceE
Confidence 44444444433 3445675 3666 9999999999999999999764 42 446689999999
Q ss_pred ccCCCCCChhhh-ccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 009519 371 TKERKNLDPAAA-PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (533)
Q Consensus 371 ~~~r~~l~~~k~-~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt 447 (533)
++.. +++..+. .+........+.+....+.+.+-.++.||||=+.. .+.+|++-++.+ .-.||.--+| |+
T Consensus 281 yd~~-Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~-~n~I~~~na~~l-----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 281 WNPD-GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAAS-EKQLTKSNAPRV-----KAKIIAEGANGPT 352 (501)
T ss_dssp ECTT-CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSS-SCCBCTTTGGGC-----CCSEEECCSSSCB
T ss_pred ECCC-CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeeccc-cCccCHhHHHHc-----CceEEEeCCCCcC
Confidence 9754 3443221 11111100000000000111244578999998877 599999998887 3579999999 54
No 59
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.12 E-value=0.63 Score=45.38 Aligned_cols=85 Identities=21% Similarity=0.250 Sum_probs=58.8
Q ss_pred eeeeecCCCchHHHHHHHHhcc-C----ceeccCcchhHHHHHHHHHHHHHHh-CCCCCCCCCceEEEeC-chhHHHHHH
Q 009519 267 IVQFEDFQMKWAFETLERYRKR-F----CMFNDDIQGTAGVALAGLLGTVRAQ-GLSLTDFADQKIVVVG-AGSAGLGVL 339 (533)
Q Consensus 267 ~I~~EDf~~~~af~iL~ryr~~-~----~~FnDDiQGTaaV~LAgli~Alr~~-g~~l~dl~~~riv~~G-AGsAg~GiA 339 (533)
.+.++-..-..+.+++++-+.. + .+...|..|.- ..-.|++.+++.. +.+++. .+++|.| +|.+|.+++
T Consensus 61 ~~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~~~~~G~n-Td~~g~~~~l~~~~~~~l~g---k~vlVtGaaGGiG~aia 136 (287)
T 1lu9_A 61 AIFVGGGDMAAGERVFEAVKKRFFGPFRVSCMLDSNGSN-TTAAAGVALVVKAAGGSVKG---KKAVVLAGTGPVGMRSA 136 (287)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCBTTBCCEEEECSTTHH-HHHHHHHHHHHHHTTSCCTT---CEEEEETCSSHHHHHHH
T ss_pred eEEEccchHHHHHHHHHHHHHhcCCCeEEEEecCCCcCC-chHHHHHHHHHHhhccCCCC---CEEEEECCCcHHHHHHH
Confidence 5556656666888999988753 1 22234555532 2356677777766 777777 9999999 899999998
Q ss_pred HHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 340 KMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 340 ~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..|.+. |. +++++|++
T Consensus 137 ~~L~~~-----G~-------~V~i~~R~ 152 (287)
T 1lu9_A 137 ALLAGE-----GA-------EVVLCGRK 152 (287)
T ss_dssp HHHHHT-----TC-------EEEEEESS
T ss_pred HHHHHC-----cC-------EEEEEECC
Confidence 887753 42 48888874
No 60
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.07 E-value=0.75 Score=43.54 Aligned_cols=91 Identities=13% Similarity=0.116 Sum_probs=53.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|... |.. ...+++++|++ .++ + . - ....++.|+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~---------~--g-~-----~~~~~~~~~ 55 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN---------T--T-L-----NYMSSNEEL 55 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS---------S--S-S-----EECSCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc---------C--c-e-----EEeCCHHHH
Confidence 6899999999999999988764 310 00268888863 111 0 0 0 012346666
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++. +|++| ++. +....+++++.+.. +.+..+|+.++|..+
T Consensus 56 ~~~--~D~vi-~~v-~~~~~~~v~~~l~~-~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 56 ARH--CDIIV-CAV-KPDIAGSVLNNIKP-YLSSKLLISICGGLN 95 (262)
T ss_dssp HHH--CSEEE-ECS-CTTTHHHHHHHSGG-GCTTCEEEECCSSCC
T ss_pred Hhc--CCEEE-EEe-CHHHHHHHHHHHHH-hcCCCEEEEECCCCC
Confidence 665 67655 332 23456677776643 224556666777665
No 61
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.07 E-value=0.39 Score=49.29 Aligned_cols=96 Identities=18% Similarity=0.281 Sum_probs=63.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|.|..|..+|..|.+. |. +++++|+.- +.-..++... .....++.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-----G~-------~V~v~dr~~----------~~~~~l~~~g-----~~~~~s~~e~ 75 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-----GH-------ECVVYDLNV----------NAVQALEREG-----IAGARSIEEF 75 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH----------HHHHHHHTTT-----CBCCSSHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCCH----------HHHHHHHHCC-----CEEeCCHHHH
Confidence 7999999999999999988764 42 677777631 1111222211 1124678998
Q ss_pred hccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++.. +||++| ++...+ -.+++++.+.....+.-||.-+||-.+
T Consensus 76 ~~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~ 119 (358)
T 4e21_A 76 CAKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHY 119 (358)
T ss_dssp HHHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCH
T ss_pred HhcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCCh
Confidence 8873 568876 332234 778888888654567788888887553
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.00 E-value=0.12 Score=51.17 Aligned_cols=99 Identities=22% Similarity=0.262 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhCCCc-eeeeecCCCchHHHHHHHHhcc------C-ceeccC--cchhHHHHHHHHHHH-HHHhCCCCCC
Q 009519 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFNDD--IQGTAGVALAGLLGT-VRAQGLSLTD 320 (533)
Q Consensus 252 vdefv~av~~~~P~~-~I~~EDf~~~~af~iL~ryr~~------~-~~FnDD--iQGTaaV~LAgli~A-lr~~g~~l~d 320 (533)
++++++.++. +++ +++.--=-...+++++++..+. + ++.++| ..|.-.= ..|++.+ ++..|.+++.
T Consensus 44 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~ 120 (272)
T 3pwz_A 44 FEAQVLQFRS--EGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLRN 120 (272)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCTT
T ss_pred HHHHHHHHhh--CCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCccC
Confidence 5677776664 333 5554443344566666554332 1 233333 3442222 3578888 8777877877
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 121 ---k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 121 ---RRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred ---CEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999888777777665 354 479988773
No 63
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.99 E-value=1.5 Score=46.23 Aligned_cols=217 Identities=17% Similarity=0.158 Sum_probs=126.0
Q ss_pred CCCc-eeeeecCCCchHHHHHHHHhc-cCceeccCc---chhHHHHHHHHHHHHHHh---------C---C---CCCCCC
Q 009519 263 WPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G---L---SLTDFA 322 (533)
Q Consensus 263 ~P~~-~I~~EDf~~~~af~iL~ryr~-~~~~FnDDi---QGTaaV~LAgli~Alr~~---------g---~---~l~dl~ 322 (533)
.|+. .|+.-=.+..| ..+ +..++ -++|||--- ..+|=-+++.+++..|-. | + .-.+|.
T Consensus 78 ~p~Lk~I~~~~~G~d~-IDl-~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~ 155 (416)
T 3k5p_A 78 ANRLIAVGCFSVGTNQ-VEL-KAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVR 155 (416)
T ss_dssp CTTCCEEEECSSCCTT-BCH-HHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCST
T ss_pred CCCcEEEEECccccCc-cCH-HHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCC
Confidence 4554 55544444433 222 33333 488998753 345556788888887631 1 0 013455
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..++.|+|.|..|..+|+.+..+ |+ +++.+|+.. ..... -+ ....+|.|
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~yd~~~-------~~~~~---~~---------~~~~sl~e 204 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESL-----GM-------TVRYYDTSD-------KLQYG---NV---------KPAASLDE 204 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTTC-------CCCBT---TB---------EECSSHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCcc-------hhccc---Cc---------EecCCHHH
Confidence 59999999999999999988654 44 788888741 11100 01 11357999
Q ss_pred HhcccCCcEEEEecc----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCC-Cccee
Q 009519 403 VVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVD 477 (533)
Q Consensus 403 ~V~~vkptvLIG~S~----~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSP-f~pv~ 477 (533)
+++. .|+++=.-- ..+.|+++.++.|. +..++.=.|.=..--|-.-.+|++ +|+ |.+.|.. |++-.
T Consensus 205 ll~~--aDvV~lhvPlt~~T~~li~~~~l~~mk----~gailIN~aRG~vvd~~aL~~aL~--~g~-i~gAalDVf~~EP 275 (416)
T 3k5p_A 205 LLKT--SDVVSLHVPSSKSTSKLITEAKLRKMK----KGAFLINNARGSDVDLEALAKVLQ--EGH-LAGAAIDVFPVEP 275 (416)
T ss_dssp HHHH--CSEEEECCCC-----CCBCHHHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTS-EEEEEECCCSSCC
T ss_pred HHhh--CCEEEEeCCCCHHHhhhcCHHHHhhCC----CCcEEEECCCChhhhHHHHHHHHH--cCC-ccEEEeCCCCCCC
Confidence 9988 899874321 23889999999993 688999888866533444445554 565 3333322 32221
Q ss_pred cCCCee--eecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhccc
Q 009519 478 LGNGKI--GHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDN 526 (533)
Q Consensus 478 ~~~G~~--~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v 526 (533)
.+.+.. ..--+..|+.+-|=+|-....++ +.|...+++.|.+..
T Consensus 276 ~~~~~~~~~pL~~~~nvilTPHig~~T~ea~-----~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 276 ASNGERFSTPLQGLENVILTPHIGGSTEEAQ-----ERIGTEVTRKLVEYS 321 (416)
T ss_dssp SSTTSCCCCTTTTCTTEEECCSCTTCCHHHH-----HHHHHHHHHHHHHHH
T ss_pred CCcccccchhHhcCCCEEECCCCCCCCHHHH-----HHHHHHHHHHHHHHH
Confidence 111110 11235679999998874332222 445555555555443
No 64
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=91.99 E-value=0.11 Score=55.49 Aligned_cols=39 Identities=26% Similarity=0.415 Sum_probs=28.4
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEE
Q 009519 424 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 466 (533)
Q Consensus 424 eevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai 466 (533)
.|+++.|.+ +|+.-+++=.|||.. -+| +-+.++++=++|
T Consensus 140 ~~i~~~i~~-~~P~A~~in~tNP~~--i~t-~a~~~~~~~k~v 178 (477)
T 3u95_A 140 LEIAEKMKK-MAPKAYLMQTANPVF--EIT-QAVRRWTGANII 178 (477)
T ss_dssp HHHHHHHHH-HCTTCEEEECSSCHH--HHH-HHHHHHHCCCEE
T ss_pred HHHHHHHHh-hCCCeEEEEecChHH--HHH-HHHHHhCCCCeE
Confidence 689999964 999999999999986 333 344556654444
No 65
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.98 E-value=0.082 Score=52.70 Aligned_cols=111 Identities=12% Similarity=0.193 Sum_probs=65.3
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcc
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~ 384 (533)
.|++.+++..+.+++. .+++|+|||.+|.+++..|.+ .|. ++|+++++. .++ -+.+
T Consensus 102 ~G~~~~L~~~~~~l~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~------a~~l 157 (277)
T 3don_A 102 IGYVNGLKQIYEGIED---AYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSR------FNNW 157 (277)
T ss_dssp HHHHHHHHHHSTTGGG---CCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGG------GTTC
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH------HHHH
Confidence 4577888888888888 999999999888888877765 354 478888874 122 0112
Q ss_pred ccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCH--HHHHHhhhcCCCCCeEEecC-CCCC
Q 009519 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNE--EVLKAMRESDSVKPAIFAMS-NPTM 448 (533)
Q Consensus 385 A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fte--evv~~Ma~~~~erPIIFaLS-NPt~ 448 (533)
+..-.. ....++.++++. +|++|-++.. |.... +.+. . +...+..+|+=++ ||..
T Consensus 158 a~~~~~----~~~~~~~~~~~~--aDiVInaTp~-Gm~~~~~~~l~-~-~~l~~~~~V~D~vY~P~~ 215 (277)
T 3don_A 158 SLNINK----INLSHAESHLDE--FDIIINTTPA-GMNGNTDSVIS-L-NRLASHTLVSDIVYNPYK 215 (277)
T ss_dssp CSCCEE----ECHHHHHHTGGG--CSEEEECCC--------CCSSC-C-TTCCSSCEEEESCCSSSS
T ss_pred HHhccc----ccHhhHHHHhcC--CCEEEECccC-CCCCCCcCCCC-H-HHcCCCCEEEEecCCCCC
Confidence 211000 012346677766 8999976653 33221 0111 1 1134677888875 7753
No 66
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.90 E-value=0.42 Score=47.42 Aligned_cols=115 Identities=11% Similarity=0.124 Sum_probs=65.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcc--cc--ccCCc-CCccCCC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF--AK--DPGDF-MGLREGA 398 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~--A~--~~~~~-~~~~~~~ 398 (533)
.||.|+|+|..|.++|..|.+.... .. ....+++++|++.-.. .+......++.. .+ +...+ .+.....
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQ-LA----QFDPRVTMWVFEEDIG-GKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH-CT----TEEEEEEEECCCCBSS-SSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCc-cc----CCCCeEEEEEcChhhh-hhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 6999999999999999999876420 00 0003688888753210 000011100000 00 00000 0001125
Q ss_pred CHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++.|+++. +|++| ++. +....+++++.++....+..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav-~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVV-PHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECC-CGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeC-CHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888886 89877 443 445788999988653445778999999543
No 67
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=91.45 E-value=0.058 Score=57.74 Aligned_cols=130 Identities=19% Similarity=0.193 Sum_probs=76.9
Q ss_pred ceEEEeCchhH-HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccc-cccCCcCCccCCCCHH
Q 009519 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASLL 401 (533)
Q Consensus 324 ~riv~~GAGsA-g~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A-~~~~~~~~~~~~~~L~ 401 (533)
.||.|+|||+. +.++|..|+.. ..++.. ..++|+|.+-=..+ .+.+....+. .-..+.. .....++.
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~---~~~l~~----~eV~L~Di~~e~~~---~~~~~~~~~l~~~~~~~~-I~~t~D~~ 97 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH---LEEFPI----RKLKLYDNDKERQD---RIAGACDVFIREKAPDIE-FAATTDPE 97 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT---TTTSCE----EEEEEECSCHHHHH---HHHHHHHHHHHHHCTTSE-EEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhC---CCCCCC----CEEEEEeCCHHHHH---HHHHHHHHHhccCCCCCE-EEEECCHH
Confidence 69999999996 44456555441 124421 47999998531111 1111111221 1000100 01235799
Q ss_pred HHhcccCCcEEEEeccCCCC----------------------------------CCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 402 EVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
+++++ +|++|=..+.++. .=+++++.|.+ +++.-+|+-.|||.
T Consensus 98 eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~-~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 98 EAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEK-YSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSCH
T ss_pred HHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCcH
Confidence 99998 8998855443211 23588888864 99999999999999
Q ss_pred CcccCCHHHHhcccCCcEEEecC
Q 009519 448 MNAECTAADAFKHAGENIVFASG 470 (533)
Q Consensus 448 ~~aE~tpe~A~~wt~Grai~AtG 470 (533)
. +..+-+++.+...-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 6 5556666666444677765
No 68
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=91.39 E-value=0.079 Score=56.94 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=75.3
Q ss_pred CceEEEeCchhHH--HHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccc-cccCCcCCccCCCC
Q 009519 323 DQKIVVVGAGSAG--LGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGAS 399 (533)
Q Consensus 323 ~~riv~~GAGsAg--~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A-~~~~~~~~~~~~~~ 399 (533)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+-=..+ ........+. ....+. ......+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~e~l~---~~~~~~~~~l~~~~~~~-~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDEERLD---AILTIAKKYVEEVGADL-KFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCHHHHH---HHHHHHHHHHHHTTCCC-EEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCHHHHH---HHHHHHHHHhccCCCCc-EEEEECC
Confidence 3699999999965 4446666531 111 1257999998531111 0111111111 100010 0012357
Q ss_pred HHHHhcccCCcEEEEeccC---------------CCCCC-------------------------HHHHHHhhhcCCCCCe
Q 009519 400 LLEVVRKVKPHVLLGLSGV---------------GGVFN-------------------------EEVLKAMRESDSVKPA 439 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~---------------~g~Ft-------------------------eevv~~Ma~~~~erPI 439 (533)
+.+++++ +|++|=..++ .|.|. +++++.|.+ +++.-+
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~-~~P~A~ 147 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEK-LSPKAW 147 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHH-HCTTCE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHH-HCCCeE
Confidence 9899988 8998744421 13333 688889964 999999
Q ss_pred EEecCCCCCcccCCHHHHhcccCCcEEEecC
Q 009519 440 IFAMSNPTMNAECTAADAFKHAGENIVFASG 470 (533)
Q Consensus 440 IFaLSNPt~~aE~tpe~A~~wt~Grai~AtG 470 (533)
|+-.|||.. +..+-+.++..- -+|.+|
T Consensus 148 ii~~TNPvd---i~t~~~~k~p~~-rviG~c 174 (480)
T 1obb_A 148 YLQAANPIF---EGTTLVTRTVPI-KAVGFC 174 (480)
T ss_dssp EEECSSCHH---HHHHHHHHHSCS-EEEEEC
T ss_pred EEEeCCcHH---HHHHHHHHCCCC-cEEecC
Confidence 999999996 455555666544 566665
No 69
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=91.39 E-value=1.4 Score=44.42 Aligned_cols=216 Identities=18% Similarity=0.178 Sum_probs=119.8
Q ss_pred CCc-eeeeecCCCchHHHHHHHHh-ccCceeccCc---chhHHHHHHHHHHHHHHh---------CC-----C----CCC
Q 009519 264 PKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL-----S----LTD 320 (533)
Q Consensus 264 P~~-~I~~EDf~~~~af~iL~ryr-~~~~~FnDDi---QGTaaV~LAgli~Alr~~---------g~-----~----l~d 320 (533)
|+. .|+.-..+..|- . ++..+ .-++|.|--- +.+|=-+++.+++..|-. |. + -.+
T Consensus 75 ~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~ 152 (330)
T 2gcg_A 75 ANLKVISTMSVGIDHL-A-LDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYG 152 (330)
T ss_dssp TTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCC
T ss_pred CCceEEEECCcccccc-c-HHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcC
Confidence 666 788877777763 2 23333 3488888643 334444788888887732 11 0 034
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCH
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
|...+|.|+|.|..|..+|+.+... |+ +++.+|+..- .....+ ... . ...++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~~~------~~~~~~----~~g-----~-~~~~l 204 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPF-----GV-------QRFLYTGRQP------RPEEAA----EFQ-----A-EFVST 204 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG-----TC-------CEEEEESSSC------CHHHHH----TTT-----C-EECCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEECCCCc------chhHHH----hcC-----c-eeCCH
Confidence 5559999999999999999987643 43 6888886311 111110 000 0 11278
Q ss_pred HHHhcccCCcEEEEecc----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEe-----cCC
Q 009519 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-----SGS 471 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~----~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~A-----tGS 471 (533)
.|+++. .|++|=.-. ..+.+++++++.|. +..++.-.|.=..--|-.-.+|++ +|+.-.| ..-
T Consensus 205 ~e~l~~--aDvVi~~vp~~~~t~~~i~~~~~~~mk----~gailIn~srg~~v~~~aL~~aL~--~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 205 PELAAQ--SDFIVVACSLTPATEGLCNKDFFQKMK----ETAVFINISRGDVVNQDDLYQALA--SGKIAAAGLDVTSPE 276 (330)
T ss_dssp HHHHHH--CSEEEECCCCCTTTTTCBSHHHHHHSC----TTCEEEECSCGGGBCHHHHHHHHH--HTSSSEEEESCCSSS
T ss_pred HHHHhh--CCEEEEeCCCChHHHHhhCHHHHhcCC----CCcEEEECCCCcccCHHHHHHHHH--cCCccEEEeCCCCCC
Confidence 999987 898774321 24678888898883 466777666532211222233433 3332111 122
Q ss_pred CCcceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCC
Q 009519 472 PFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNE 529 (533)
Q Consensus 472 Pf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~ 529 (533)
|+++ +... -+..|+.+-|-+|-....+ ...|...+++.+......+
T Consensus 277 pl~~-----~~~l--~~~~nvi~tPh~~~~t~~~-----~~~~~~~~~~n~~~~~~g~ 322 (330)
T 2gcg_A 277 PLPT-----NHPL--LTLKNCVILPHIGSATHRT-----RNTMSLLAANNLLAGLRGE 322 (330)
T ss_dssp SCCT-----TCGG--GGCTTEEECCSCTTCBHHH-----HHHHHHHHHHHHHHHHHTC
T ss_pred CCCC-----CChh--hcCCCEEECCCCCCCcHHH-----HHHHHHHHHHHHHHHHcCC
Confidence 2221 1111 2346888888876432221 2445555555555544333
No 70
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.35 E-value=1.4 Score=43.99 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=95.0
Q ss_pred hCCCc-eeeeecCCCchHHHHHHHHhccCceeccCcc---hhHHHHHHHHHHHHHHh---------C------CCCCCCC
Q 009519 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G------LSLTDFA 322 (533)
Q Consensus 262 ~~P~~-~I~~EDf~~~~af~iL~ryr~~~~~FnDDiQ---GTaaV~LAgli~Alr~~---------g------~~l~dl~ 322 (533)
..|+. .|+.--.+..|- .+..--+..++|.|---- .+|=-+++.+++..|-. | ..-.+|.
T Consensus 63 ~~~~Lk~I~~~~~G~d~i-d~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~ 141 (307)
T 1wwk_A 63 SAPKLKVIARAGVGLDNI-DVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELE 141 (307)
T ss_dssp TCTTCCEEEESSSCCTTB-CHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCT
T ss_pred hCCCCeEEEECCcccccc-CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccC
Confidence 46776 788777777763 222222334888875433 34444788888887731 1 0112455
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ..+.... . ...+|.|
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~g-~----~~~~l~e 192 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANAL-----GM-------NILLYDPYP---------NE---ERAKEVN-G----KFVDLET 192 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CH---HHHHHTT-C----EECCHHH
T ss_pred CceEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCC---------Ch---hhHhhcC-c----cccCHHH
Confidence 59999999999999999988754 43 688887631 11 1111100 0 1236999
Q ss_pred HhcccCCcEEEEecc----CCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 403 VVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 403 ~V~~vkptvLIG~S~----~~g~Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
+++. .|+++=.-- ..+.++++.++.|. +..++.=.|.-.
T Consensus 193 ll~~--aDvV~l~~p~~~~t~~li~~~~l~~mk----~ga~lin~arg~ 235 (307)
T 1wwk_A 193 LLKE--SDVVTIHVPLVESTYHLINEERLKLMK----KTAILINTSRGP 235 (307)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC----TTCEEEECSCGG
T ss_pred HHhh--CCEEEEecCCChHHhhhcCHHHHhcCC----CCeEEEECCCCc
Confidence 9987 898874421 24789999999993 577888888743
No 71
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.33 E-value=0.34 Score=51.58 Aligned_cols=102 Identities=17% Similarity=0.194 Sum_probs=65.4
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
+.+|.|+|+|..|.++|..|.+. |. +++++|+. .+ ... .+.+.... .+.....++.|
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~~--~~~----~l~~~~~~-~gi~~~~s~~e 71 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----RE--KTE----EVIAENPG-KKLVPYYTVKE 71 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----HH--HHH----HHHHHSTT-SCEEECSSHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----HH--HHH----HHHhhCCC-CCeEEeCCHHH
Confidence 48999999999999999998753 53 57777763 11 111 11111000 01112357899
Q ss_pred Hhccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+++.. ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 72 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 72 FVESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp HHHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88753 478877 4444556788999888654455678889999765
No 72
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=91.33 E-value=0.56 Score=49.74 Aligned_cols=183 Identities=13% Similarity=0.074 Sum_probs=116.5
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCceeeeecCCCchH--HHHHHHHhcc-----CceeccC----------cchhHHHHH
Q 009519 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKR-----FCMFNDD----------IQGTAGVAL 304 (533)
Q Consensus 243 ~~g~eY~~~vdefv~av~~~~-P~~~I~~EDf~~~~a--f~iL~ryr~~-----~~~FnDD----------iQGTaaV~L 304 (533)
.+.+|...+...|++++...- |..-|-=+|++..-. -.+.++|+.. ..++.-+ -.-||-=+.
T Consensus 115 ~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 115 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCCHHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCCHHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 345677788999999998877 788888899987311 1244666431 1222221 123555555
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccCccccCCCCCChhh-h
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 382 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~-lvD~~GLi~~~r~~l~~~k-~ 382 (533)
-++-.+++..|.+++. .+|+|.|.|..|...|++|.+. |. +++ +.|++|-|++... |+... +
T Consensus 195 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~aa~~L~e~-----Ga-------kVVavsD~~G~i~dp~G-lD~~~l~ 258 (421)
T 1v9l_A 195 VATREMAKKLWGGIEG---KTVAIQGMGNVGRWTAYWLEKM-----GA-------KVIAVSDINGVAYRKEG-LNVELIQ 258 (421)
T ss_dssp HHHHHHHHHHHSCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEEECSSCEEECTTC-CCTHHHH
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEECCCcEEECCCC-CCHHHHH
Confidence 5677788888988888 9999999999999999888653 42 555 9999999987642 22211 1
Q ss_pred ccccccCC--cCCcc-----CCC-CHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 009519 383 PFAKDPGD--FMGLR-----EGA-SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (533)
Q Consensus 383 ~~A~~~~~--~~~~~-----~~~-~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN-Pt~ 448 (533)
.+...... |.+-+ ... +-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+.
T Consensus 259 ~~k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l-----~ak~V~EgAN~p~t 326 (421)
T 1v9l_A 259 KNKGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV-----KARLVVEGANGPTT 326 (421)
T ss_dssp HTTTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC-----CCSEEECCSSSCBC
T ss_pred HHHHhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc-----CceEEEecCCCcCC
Confidence 11111000 00000 000 1122 33468999997774 789998888877 3578888888 653
No 73
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.32 E-value=0.062 Score=54.34 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=74.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+.|.++|.++.. .|+- +++++|.+-=..++ ..++.+...+.... ... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIVKNMPHGKALDTSHTNVMAYSN-CKV---SGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTHHHHHTCC-CCE---EEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCHHHHHHHHHHHHhhhhhcCCC-cEE---EECCCH-H
Confidence 589999999999999888875 3541 39999975100000 00111110011111 000 112456 7
Q ss_pred HhcccCCcEEEEeccCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--
Q 009519 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-- 461 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~----------------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt-- 461 (533)
++++ +|++|=+.+.| |. +-+++.+.|.+ +++.-+|+-.|||... ..+-+.+.+
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNP~~~---~t~~~~~~~g~ 142 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK-NCPNAFIIVVTNPVDV---MVQLLHQHSGV 142 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSSHHH---HHHHHHHHHCC
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecCChHH---HHHHHHHhcCC
Confidence 8887 89988543322 31 35677777754 6788887767999973 244454444
Q ss_pred CCcEEEecCCCCc
Q 009519 462 GENIVFASGSPFE 474 (533)
Q Consensus 462 ~Grai~AtGSPf~ 474 (533)
.-.-+|++|+..+
T Consensus 143 ~~~rviG~gt~ld 155 (322)
T 1t2d_A 143 PKNKIIGLGGVLD 155 (322)
T ss_dssp CGGGEEECCHHHH
T ss_pred ChHHEEeccCccc
Confidence 3445788875554
No 74
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.30 E-value=0.67 Score=46.09 Aligned_cols=101 Identities=16% Similarity=0.133 Sum_probs=61.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|.+. |.. ...+++++|+.- ++ +....+.+.. .....+..|+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~~----~~----~~~~~l~~~G-----~~~~~~~~e~ 81 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPDM----DL----ATVSALRKMG-----VKLTPHNKET 81 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSCT----TS----HHHHHHHHHT-----CEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCCc----cH----HHHHHHHHcC-----CEEeCChHHH
Confidence 6899999999999999988753 421 013688887631 10 0111111111 0112457788
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~ 449 (533)
++. +|++| ++. +.-..+++++.++....+..+|..++|..+.
T Consensus 82 ~~~--aDvVi-lav-~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~ 123 (322)
T 2izz_A 82 VQH--SDVLF-LAV-KPHIIPFILDEIGADIEDRHIVVSCAAGVTI 123 (322)
T ss_dssp HHH--CSEEE-ECS-CGGGHHHHHHHHGGGCCTTCEEEECCTTCCH
T ss_pred hcc--CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCH
Confidence 876 78766 333 3446677888775434456688888888763
No 75
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.28 E-value=0.12 Score=51.50 Aligned_cols=125 Identities=20% Similarity=0.244 Sum_probs=69.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||.|+|||+.|.++|..+.. .|+- ..++++|.+---..+. .++.+.. ++..+. .. ...+ .++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~~-----~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~-~i----~~~~-~~a 64 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGSC-----SELVLVDRDEDRAQAEAEDIAHAA-PVSHGT-RV----WHGG-HSE 64 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHTTSC-CTTSCC-EE----EEEC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCHHHHHHHHHhhhhhh-hhcCCe-EE----EECC-HHH
Confidence 89999999999999987654 3432 3799999852100000 0011100 111110 00 0123 356
Q ss_pred hcccCCcEEEEeccCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEec
Q 009519 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFAS 469 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~At 469 (533)
++. +|++|=+.+.+.. .-+++++.|++ +++.-+|+-.|||.. ...+.+.+.+.-..+|.+
T Consensus 65 ~~~--aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 65 LAD--AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITR-AAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp GTT--CSEEEECC------------CHHHHHHHHHHHHHHHHH-HCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEEC
T ss_pred hCC--CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHH-hCCCeEEEEecCchH---HHHHHHHHhCChhcEEeC
Confidence 777 8988744433321 22678888865 677878877999986 334444444444567777
Q ss_pred CCC
Q 009519 470 GSP 472 (533)
Q Consensus 470 GSP 472 (533)
|.-
T Consensus 139 gt~ 141 (304)
T 2v6b_A 139 GTV 141 (304)
T ss_dssp TTH
T ss_pred CcC
Confidence 644
No 76
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.10 E-value=0.11 Score=52.28 Aligned_cols=74 Identities=24% Similarity=0.422 Sum_probs=42.7
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCH
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
|++.||+|+|+|..|..+|+.|+.+++ .+|.++|.+=+ +..+|+. + .|... + -|.+....+
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGV-----------G~i~lvD~D~V---e~sNL~R-q-~~~~~--d-iG~~Ka~aa 94 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGI-----------GKLLLFDYDKV---ELANMNR-L-FFQPH--Q-AGLSKVQAA 94 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCCBC-----------------C--C-TTSBHHHHH
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCC-----------CEEEEECCCcc---Chhhccc-c-cCChh--h-cCchHHHHH
Confidence 333999999999999999999998755 69999998632 2234554 2 23211 1 111112345
Q ss_pred HHHhcccCCcEEE
Q 009519 401 LEVVRKVKPHVLL 413 (533)
Q Consensus 401 ~e~V~~vkptvLI 413 (533)
.+.++...|++=|
T Consensus 95 ~~~L~~iNP~v~v 107 (292)
T 3h8v_A 95 EHTLRNINPDVLF 107 (292)
T ss_dssp HHHHHHHCTTSEE
T ss_pred HHHHHhhCCCcEE
Confidence 6666666666644
No 77
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=91.07 E-value=0.073 Score=56.59 Aligned_cols=131 Identities=14% Similarity=0.155 Sum_probs=77.6
Q ss_pred ceEEEeCchhH-HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccc-cccCCcCCccCCCCH
Q 009519 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFA-KDPGDFMGLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsA-g~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A-~~~~~~~~~~~~~~L 400 (533)
.||.|+|||+. +.+++..|+.. ..++.. ..++|+|.+--. ++ +.+.+....+. .-..+.. .....++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~~----~ev~L~Di~~~~--e~~~~~~~~~~~~~~~~~~~~~-i~~t~D~ 77 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELPV----GELWLVDIPEGK--EKLEIVGALAKRMVEKAGVPIE-IHLTLDR 77 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCCE----EEEEEECCGGGH--HHHHHHHHHHHHHHHHTTCCCE-EEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCCC----CEEEEEEcCCCh--HHHHHHHHHHHHHHhhcCCCcE-EEEeCCH
Confidence 69999999997 55555555431 134421 579999985300 11 00111111221 1000100 0123579
Q ss_pred HHHhcccCCcEEEEeccCCCC----------------------------------CCHHHHHHhhhcCCCCCeEEecCCC
Q 009519 401 LEVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSNP 446 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~~erPIIFaLSNP 446 (533)
.|++++ +|++|=..++++. .=+++++.|.+ +++.-+|+-.|||
T Consensus 78 ~eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~-~~P~a~ii~~tNP 154 (450)
T 1s6y_A 78 RRALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEE-LCPDAWLINFTNP 154 (450)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSS
T ss_pred HHHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCc
Confidence 999998 8998855544321 23588888864 9999999999999
Q ss_pred CCcccCCHHHHhcccCCcEEEecC
Q 009519 447 TMNAECTAADAFKHAGENIVFASG 470 (533)
Q Consensus 447 t~~aE~tpe~A~~wt~Grai~AtG 470 (533)
.. +..+-+++.+.-.-+|.+|
T Consensus 155 vd---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 155 AG---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp HH---HHHHHHHHHCCCCCEEECC
T ss_pred HH---HHHHHHHHhCCCCCEEEeC
Confidence 96 5556666777443677776
No 78
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.96 E-value=0.067 Score=54.14 Aligned_cols=129 Identities=14% Similarity=0.176 Sum_probs=74.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+.|.++|..+.. .|+- +++++|.+-=..++ ..++.+...++... ... ....++ +
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 78 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCMALIGSP-AKI---FGENNY-E 78 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHHHHHTCC-CCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHhhccCCC-CEE---EECCCH-H
Confidence 589999999999999977765 3541 49999985210000 00111111111111 011 112456 7
Q ss_pred HhcccCCcEEEEecc---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCcEE
Q 009519 403 VVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Grai 466 (533)
++++ +|++|=+-+ .+|. +-+++.+.+.+ +++.-+|+--|||... ..+-+.+.+ .-.-+
T Consensus 79 al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rv 152 (328)
T 2hjr_A 79 YLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGK-YCPNAFVICITNPLDA---MVYYFKEKSGIPANKV 152 (328)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGE
T ss_pred HHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHH-HCCCeEEEEecCchHH---HHHHHHHhcCCChhhE
Confidence 7887 898874432 2332 24567777754 6778787667999873 244444433 23457
Q ss_pred EecCCCCc
Q 009519 467 FASGSPFE 474 (533)
Q Consensus 467 ~AtGSPf~ 474 (533)
|++|++.+
T Consensus 153 iG~~t~Ld 160 (328)
T 2hjr_A 153 CGMSGVLD 160 (328)
T ss_dssp EESCHHHH
T ss_pred EEeCcHHH
Confidence 89887776
No 79
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=90.91 E-value=2.5 Score=42.62 Aligned_cols=147 Identities=20% Similarity=0.190 Sum_probs=91.3
Q ss_pred hCCCc-eeeeecCCCchHHHHHHHHh-ccCceeccCcch---hHHHHHHHHHHHHHHh-----------------CC-C-
Q 009519 262 RWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ-----------------GL-S- 317 (533)
Q Consensus 262 ~~P~~-~I~~EDf~~~~af~iL~ryr-~~~~~FnDDiQG---TaaV~LAgli~Alr~~-----------------g~-~- 317 (533)
..|+. .|+.--.+..|- .+ +..+ .-+++.|----. +|=-+++.+|+..|-. +. +
T Consensus 64 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~ 141 (334)
T 2dbq_A 64 NAPKLRIVANYAVGYDNI-DI-EEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPK 141 (334)
T ss_dssp TCTTCCEEEESSSCCTTB-CH-HHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTT
T ss_pred hCCCceEEEECCcccccc-cH-HHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccc
Confidence 46776 777766666652 22 2233 348888864333 3444788888887732 10 0
Q ss_pred ---CCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCc
Q 009519 318 ---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (533)
Q Consensus 318 ---l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~ 394 (533)
-.+|...+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ..+.... .
T Consensus 142 ~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~g-~--- 193 (334)
T 2dbq_A 142 WFLGYDVYGKTIGIIGLGRIGQAIAKRAKGF-----NM-------RILYYSRTR---------KE---EVERELN-A--- 193 (334)
T ss_dssp TTCCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CH---HHHHHHC-C---
T ss_pred cccccCCCCCEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEECCCc---------ch---hhHhhcC-c---
Confidence 1345559999999999999999988753 43 688888641 11 0111100 0
Q ss_pred cCCCCHHHHhcccCCcEEEEec-cC---CCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 395 REGASLLEVVRKVKPHVLLGLS-GV---GGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 395 ~~~~~L~e~V~~vkptvLIG~S-~~---~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
...+|.|+++. +|+++=.- .. .+.++++.++.|. +..+|.-.|.
T Consensus 194 -~~~~l~~~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk----~~ailIn~sr 241 (334)
T 2dbq_A 194 -EFKPLEDLLRE--SDFVVLAVPLTRETYHLINEERLKLMK----KTAILINIAR 241 (334)
T ss_dssp -EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTCEEEECSC
T ss_pred -ccCCHHHHHhh--CCEEEECCCCChHHHHhhCHHHHhcCC----CCcEEEECCC
Confidence 12468999987 89876332 21 3678888888883 5678777775
No 80
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.78 E-value=0.24 Score=49.35 Aligned_cols=89 Identities=12% Similarity=0.244 Sum_probs=54.9
Q ss_pred HHHHHHHHHhC-CCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhc
Q 009519 305 AGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (533)
Q Consensus 305 Agli~Alr~~g-~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~ 383 (533)
.|++.+++..+ .+++. .+++|+|||.+|.++|..|.+. |. ++|+++|+. .++ .......
T Consensus 125 ~G~~~~l~~~~~~~l~~---~~vlVlGaGg~g~aia~~L~~~-----G~------~~V~v~nR~----~~k--a~~la~~ 184 (297)
T 2egg_A 125 LGYVQALEEEMNITLDG---KRILVIGAGGGARGIYFSLLST-----AA------ERIDMANRT----VEK--AERLVRE 184 (297)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECSS----HHH--HHHHHHH
T ss_pred HHHHHHHHHhCCCCCCC---CEEEEECcHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH--HHHHHHH
Confidence 67888888777 66777 9999999999888888877653 43 479988873 111 1111111
Q ss_pred cccccCCcCCccCCCCHHHHhcccCCcEEEEeccC
Q 009519 384 FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGV 418 (533)
Q Consensus 384 ~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~ 418 (533)
+....... ....++.++++. +|++|-+...
T Consensus 185 ~~~~~~~~---~~~~~~~~~~~~--aDivIn~t~~ 214 (297)
T 2egg_A 185 GDERRSAY---FSLAEAETRLAE--YDIIINTTSV 214 (297)
T ss_dssp SCSSSCCE---ECHHHHHHTGGG--CSEEEECSCT
T ss_pred hhhccCce---eeHHHHHhhhcc--CCEEEECCCC
Confidence 11100000 011246677766 8999987764
No 81
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.75 E-value=0.26 Score=48.02 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-.|++.+++..|.+++. .+++|+|||.+|.++|..|.+. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~---k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPG---LRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCC---CEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 56777888877877777 9999999998888888777653 4 268888773
No 82
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=90.72 E-value=1.5 Score=45.10 Aligned_cols=169 Identities=16% Similarity=0.233 Sum_probs=102.7
Q ss_pred HhCCCc-eeeeecCCCchH-HHHHHHHhccCceeccC-c--chhHHHHHHHHHHHHHH--------------------hC
Q 009519 261 ARWPKA-IVQFEDFQMKWA-FETLERYRKRFCMFNDD-I--QGTAGVALAGLLGTVRA--------------------QG 315 (533)
Q Consensus 261 ~~~P~~-~I~~EDf~~~~a-f~iL~ryr~~~~~FnDD-i--QGTaaV~LAgli~Alr~--------------------~g 315 (533)
...|+. .|+.-..+..|- ..-+.+.+.-+.|.|-- . ..+|=-+++.+++..|- .+
T Consensus 80 ~~~~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~ 159 (364)
T 2j6i_A 80 DKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDA 159 (364)
T ss_dssp HHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTC
T ss_pred hhCCCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCc
Confidence 346776 888888877774 23333322257777643 2 33455578888888772 23
Q ss_pred CCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCcc
Q 009519 316 LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (533)
Q Consensus 316 ~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~ 395 (533)
..|.. .+|.|+|.|..|..+|+.+... |+ ++++.+|+... ... .+... +..
T Consensus 160 ~~l~g---~tvgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~~~--------~~~---~~~~~----g~~ 210 (364)
T 2j6i_A 160 YDIEG---KTIATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQAL--------PKD---AEEKV----GAR 210 (364)
T ss_dssp CCSTT---CEEEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSSCC--------CHH---HHHHT----TEE
T ss_pred ccCCC---CEEEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCCcc--------chh---HHHhc----CcE
Confidence 44555 9999999999999999988643 43 23888876321 111 11110 000
Q ss_pred CCCCHHHHhcccCCcEEEEecc----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEE
Q 009519 396 EGASLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 466 (533)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~----~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai 466 (533)
...+|.|+++. .|+++=.-- ..++++++.++.|. +..+|.-.|+-..--|-.-.+|.+ +|+.-
T Consensus 211 ~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~ga~lIn~arG~~vd~~aL~~aL~--~g~i~ 277 (364)
T 2j6i_A 211 RVENIEELVAQ--ADIVTVNAPLHAGTKGLINKELLSKFK----KGAWLVNTARGAICVAEDVAAALE--SGQLR 277 (364)
T ss_dssp ECSSHHHHHHT--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred ecCCHHHHHhc--CCEEEECCCCChHHHHHhCHHHHhhCC----CCCEEEECCCCchhCHHHHHHHHH--cCCCc
Confidence 12469999987 899884421 12789999999993 577888888744422333334444 45533
No 83
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.67 E-value=0.45 Score=46.53 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=60.1
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec--cCccccCCCCCChhhhccccc--cCCcCCccCCC--
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKERKNLDPAAAPFAKD--PGDFMGLREGA-- 398 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~--~GLi~~~r~~l~~~k~~~A~~--~~~~~~~~~~~-- 398 (533)
||.|+|+|..|..+|..|.+. | .+++++|+ +.-- +...++...+. ...+.......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 63 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI------LKSISAGREHPRLGVKLNGVEIFWPE 63 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH------HHHHHTTCCBTTTTBCCCSEEEECGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH------HHHHHHhCcCcccCccccceEEecHH
Confidence 799999999999999988764 4 36888887 3210 00000000000 00000000112
Q ss_pred CHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
++.|+++. +|++| ++. +.-..+++++.++. ..+..+|..++|-.
T Consensus 64 ~~~~~~~~--~D~vi-~~v-~~~~~~~v~~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 64 QLEKCLEN--AEVVL-LGV-STDGVLPVMSRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GHHHHHTT--CSEEE-ECS-CGGGHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred hHHHHHhc--CCEEE-EcC-ChHHHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence 67888876 88877 333 33467889988865 66677888899876
No 84
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.60 E-value=0.14 Score=44.66 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 4699999999999999988764 65 57778763
No 85
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=90.34 E-value=0.5 Score=47.44 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=64.2
Q ss_pred eEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccC---CCCH
Q 009519 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE---GASL 400 (533)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~---~~~L 400 (533)
||+|+|| |..|..++..|+. .|+ -..++++|.+-. .+ ....+.+...+.. ... ..++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~------~a~dL~~~~~~~~-l~~~~~t~d~ 62 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PG------VAADLSHIETRAT-VKGYLGPEQL 62 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HH------HHHHHTTSSSSCE-EEEEESGGGH
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HH------HHHHHhccCcCce-EEEecCCCCH
Confidence 8999998 9999998877653 354 147999998641 10 1111111110000 001 1368
Q ss_pred HHHhcccCCcEEEEeccC---CC-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 401 LEVVRKVKPHVLLGLSGV---GG-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~---~g-----------~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
.+++++ +|++|=+.+. +| ...+++++.|.+ +++..+|+-.|||..
T Consensus 63 ~~a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~sNPv~ 121 (314)
T 1mld_A 63 PDCLKG--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ-HCPDAMICIISNPVN 121 (314)
T ss_dssp HHHHTT--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HHHhCC--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCCcc
Confidence 999998 8998744333 33 346677777754 778888888999987
No 86
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.34 E-value=0.15 Score=44.46 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=53.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||+|+|+|..|..++..+.. .|. + ++++|++ .+ ..+.+++.... . .....++.++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~------~~~~~a~~~~~-~-~~~~~~~~~~ 77 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----ID------HVRAFAEKYEY-E-YVLINDIDSL 77 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HH------HHHHHHHHHTC-E-EEECSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HH------HHHHHHHHhCC-c-eEeecCHHHH
Confidence 799999999999988876654 232 3 8888873 11 11223322100 0 0123568898
Q ss_pred hcccCCcEEEEeccCC-CCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 404 VRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 404 V~~vkptvLIG~S~~~-g~Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
++. +|++|-+++.+ ..++.++ ..+.-+|+-+++|.
T Consensus 78 ~~~--~Divi~at~~~~~~~~~~~-------l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 78 IKN--NDVIITATSSKTPIVEERS-------LMPGKLFIDLGNPP 113 (144)
T ss_dssp HHT--CSEEEECSCCSSCSBCGGG-------CCTTCEEEECCSSC
T ss_pred hcC--CCEEEEeCCCCCcEeeHHH-------cCCCCEEEEccCCc
Confidence 887 89988766543 2333322 23466777777775
No 87
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.31 E-value=0.23 Score=48.54 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-.|++.+++..|..++. .+++|+|||.+|.++|..|.+. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~---~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPN---QHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 46788888887877777 9999999999888888877653 4 378888873
No 88
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.17 E-value=0.28 Score=48.60 Aligned_cols=99 Identities=19% Similarity=0.228 Sum_probs=59.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC--------ccccCCCCCChhhhccccccCCcCCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--------LITKERKNLDPAAAPFAKDPGDFMGLR 395 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G--------Li~~~r~~l~~~k~~~A~~~~~~~~~~ 395 (533)
.||.|+|+|+-|..+|..|.+. | .+++++|+.- +...++ ....++ + ++. .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~-~~g~~~--~-~~~------~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA-TLGDYT--F-RPA------A 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET-TTCCEE--E-CCS------C
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec-CCCcEE--E-eee------e
Confidence 5899999999999999988653 4 3688888753 111100 000000 0 000 0
Q ss_pred CCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
-..++.++.+. +|++| ++. +--.++++++.++....+..+|+.+.|-..
T Consensus 61 ~~~~~~~~~~~--~DlVi-lav-K~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 61 VVRSAAELETK--PDCTL-LCI-KVVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp EESCGGGCSSC--CSEEE-ECC-CCCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred eECCHHHcCCC--CCEEE-Eec-CCCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 12345555433 78877 554 344566899998654556678888999765
No 89
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.13 E-value=0.33 Score=47.39 Aligned_cols=107 Identities=22% Similarity=0.329 Sum_probs=66.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcc
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~ 384 (533)
.|++.+++..|..++. .|++|+|+|.+|.++|..|.+. |. +|+++|+.- + .-+.+
T Consensus 114 ~G~~~~l~~~~~~~~~---~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~~----~------~~~~l 168 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKE---KSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRTK----E------KAIKL 168 (275)
T ss_dssp HHHHHHHHHHCTTGGG---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSH----H------HHHHH
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECCH----H------HHHHH
Confidence 4788888888877777 9999999999999999888764 32 688887731 1 11122
Q ss_pred ccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCC--HHHHHHhhhcCCCCCeEEecCC
Q 009519 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFN--EEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 385 A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft--eevv~~Ma~~~~erPIIFaLSN 445 (533)
++... . ....++.++++. +|++|-+.. .+... ++.+. . +...+..+|+-++.
T Consensus 169 ~~~~g-~---~~~~~~~~~~~~--aDiVi~atp-~~~~~~~~~~i~-~-~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 169 AQKFP-L---EVVNSPEEVIDK--VQVIVNTTS-VGLKDEDPEIFN-Y-DLIKKDHVVVDIIY 222 (275)
T ss_dssp TTTSC-E---EECSCGGGTGGG--CSEEEECSS-TTSSTTCCCSSC-G-GGCCTTSEEEESSS
T ss_pred HHHcC-C---eeehhHHhhhcC--CCEEEEeCC-CCCCCCCCCCCC-H-HHcCCCCEEEEcCC
Confidence 22100 0 011257777876 899997664 34321 11221 1 11345668888887
No 90
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.96 E-value=0.13 Score=52.96 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=30.9
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
++.||+|+|||..|..+|+.|+.+++ ++|.++|.+
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGV-----------g~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCC-----------CEEEEecCC
Confidence 34999999999999999999988755 699999986
No 91
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.94 E-value=0.93 Score=43.03 Aligned_cols=98 Identities=17% Similarity=0.275 Sum_probs=57.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCC-ChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gl-s~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|+|..|..+|..|.+. |. .. ++++++|++ . +.+. .+++... .....++.|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~~~----~~V~~~~r~----~--~~~~----~~~~~~g----~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIVSS----NQIICSDLN----T--ANLK----NASEKYG----LTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSSCG----GGEEEECSC----H--HHHH----HHHHHHC----CEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCCCC----CeEEEEeCC----H--HHHH----HHHHHhC----CEEeCChHH
Confidence 5899999999999999988763 42 21 368888763 1 1111 1221100 012356888
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+++. +|++| ++. +.-..+++++.+.....+..+|...++-.+
T Consensus 60 ~~~~--aDvVi-lav-~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 60 VAKN--ADILI-LSI-KPDLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp HHHH--CSEEE-ECS-CTTTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred HHHh--CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 8877 78876 333 444567777777543345667777777665
No 92
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.92 E-value=0.82 Score=46.74 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=61.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhh--hccccccCCcC-CccCCCCH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA--APFAKDPGDFM-GLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k--~~~A~~~~~~~-~~~~~~~L 400 (533)
.||.|+|+|+-|.++|..|.+. | .+++++|++--..+ .+.... ..|-.. -... ...-..++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~---~i~~~~~~~~~l~g-~~l~~~i~~t~d~ 93 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVD---EMQAEGVNNRYLPN-YPFPETLKAYCDL 93 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHH---HHHHHSSBTTTBTT-CCCCTTEEEESCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHH---HHHHcCCCcccCCC-CccCCCeEEECCH
Confidence 5899999999999999988753 4 25777777411000 010000 000000 0000 00112578
Q ss_pred HHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
.|+++. +|++| ++. |--+.+++++.++....+..+|..++|-..
T Consensus 94 ~ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 94 KASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 888877 78766 332 444778888888654556778888888655
No 93
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.91 E-value=0.15 Score=50.80 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=62.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhh------ccccccCCcCCccCC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA------PFAKDPGDFMGLREG 397 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~------~~A~~~~~~~~~~~~ 397 (533)
.||.|+|||+.|.++|..+... |+. +++++|.+- ++ +..... .+....... ...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~~------~V~l~D~~~----~~--~~~~~~~l~~~~~~~~~~~~i---~~t 64 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NLA------DVVLFDIAE----GI--PQGKALDITHSMVMFGSTSKV---IGT 64 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSS----SH--HHHHHHHHHHHHHHHTCCCCE---EEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCc------eEEEEeCCc----hH--HHHHHHHHHhhhhhcCCCcEE---EEC
Confidence 6899999999999999998764 431 599999752 11 111000 111001000 112
Q ss_pred CCHHHHhcccCCcEEEEeccCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 009519 398 ASLLEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (533)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~---g-----------~Fteevv~~Ma~~~~erPIIFaLSNPt~~ 449 (533)
.++ ++++. +|++|=+-+.| | .+.+++++.+.+ +++.-||+-.|||...
T Consensus 65 ~d~-~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~~ 126 (317)
T 2ewd_A 65 DDY-ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLDV 126 (317)
T ss_dssp SCG-GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHH
T ss_pred CCH-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHHH
Confidence 456 77877 89887444333 2 134677777754 6788899999999863
No 94
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.87 E-value=0.27 Score=50.10 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=26.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 6899999999999999888764 54 5788885
No 95
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.72 E-value=0.19 Score=49.30 Aligned_cols=32 Identities=28% Similarity=0.652 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 43 68888874
No 96
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.50 E-value=0.48 Score=47.96 Aligned_cols=114 Identities=14% Similarity=0.212 Sum_probs=63.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhh-----ccccccCCc-CCccCC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDF-MGLREG 397 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~-----~~A~~~~~~-~~~~~~ 397 (533)
.||.|+|+|..|.++|..|.++... .. .-..+++++|+..-+. .+......+. .|- +.... .+....
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKN-NY----LFENEVRMWIRDEFVN-GERMVDIINNKHENTKYL-KGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHH-CT----TBCSCEEEECCSCC----CCHHHHHHHHCBCTTTS-TTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc-cC----CCCCeEEEEECChhhh-hHHHHHHHHhcCcccccC-CcccCcCCeEEE
Confidence 4899999999999999999876531 00 0003688888753210 0000111000 000 00000 000112
Q ss_pred CCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhh----cCCCCCeEEecCCCCC
Q 009519 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE----SDSVKPAIFAMSNPTM 448 (533)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~----~~~erPIIFaLSNPt~ 448 (533)
.++.|+++. +|++| ++. +.-..+++++.++. ...+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav-~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIV-PCQYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECC-CHHHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcC-CHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467888877 88766 332 34577888888853 3445678889999654
No 97
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=89.48 E-value=0.32 Score=51.84 Aligned_cols=107 Identities=17% Similarity=0.226 Sum_probs=65.0
Q ss_pred CceEEEeCchhH--HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCC
Q 009519 323 DQKIVVVGAGSA--GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 323 ~~riv~~GAGsA--g~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
+.||.|+||||. |.|++..|+.. ..+ . ..|+|+|.+- ++ +.+......+.+ .++. .....+
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~--~~~~-I~~TtD 68 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGN--GRWR-YEAVST 68 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTT--SCEE-EEEESS
T ss_pred CCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhc--cCCe-EEEECC
Confidence 379999999996 68999888752 222 1 3899999752 11 000000011111 1100 112367
Q ss_pred HHHHhcccCCcEEEEeccCC---------------CC---------------------CCHHHHHHhhhcCCCCCeEEec
Q 009519 400 LLEVVRKVKPHVLLGLSGVG---------------GV---------------------FNEEVLKAMRESDSVKPAIFAM 443 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~---------------g~---------------------Fteevv~~Ma~~~~erPIIFaL 443 (533)
+.||+++ +|++|=.-.++ |. .-.++++.|.+ ++++-+++-.
T Consensus 69 ~~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~-~~p~a~~i~~ 145 (450)
T 3fef_A 69 LKKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRD-YAPESWVINY 145 (450)
T ss_dssp HHHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEEC
T ss_pred HHHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHH-HCCCeEEEEe
Confidence 9999999 89887332211 22 13567777754 8999999999
Q ss_pred CCCCC
Q 009519 444 SNPTM 448 (533)
Q Consensus 444 SNPt~ 448 (533)
|||..
T Consensus 146 tNPvd 150 (450)
T 3fef_A 146 TNPMS 150 (450)
T ss_dssp CSSHH
T ss_pred cCchH
Confidence 99996
No 98
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.46 E-value=0.37 Score=49.50 Aligned_cols=99 Identities=19% Similarity=0.312 Sum_probs=61.2
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCC
Q 009519 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
++...+++|+|+|..|..+|+.+... |. +++.+|++. . .+...+..+.... ... .....+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~----~--~l~~~~~~~g~~~-~~~-~~~~~~ 224 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINI----D--KLRQLDAEFCGRI-HTR-YSSAYE 224 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHTTTSS-EEE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----H--HHHHHHHhcCCee-Eec-cCCHHH
Confidence 45559999999999999999888653 42 688888731 1 1111111111100 000 001235
Q ss_pred HHHHhcccCCcEEEEeccCC-----CCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 400 LLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~-----g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
+.+.++. .|++|.+...+ ..++++.++.|. +.-+|.-+|
T Consensus 225 l~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk----~g~~iV~va 268 (377)
T 2vhw_A 225 LEGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK----PGAVLVDIA 268 (377)
T ss_dssp HHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC----TTCEEEEGG
T ss_pred HHHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC----CCcEEEEEe
Confidence 7888876 89999876544 457999999993 455666666
No 99
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.46 E-value=4.4 Score=42.28 Aligned_cols=162 Identities=16% Similarity=0.174 Sum_probs=98.7
Q ss_pred CCCc-eeeeecCCCchHHHHHHHHh-ccCceeccCcc---hhHHHHHHHHHHHHHHh---------C---C---CCCCCC
Q 009519 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G---L---SLTDFA 322 (533)
Q Consensus 263 ~P~~-~I~~EDf~~~~af~iL~ryr-~~~~~FnDDiQ---GTaaV~LAgli~Alr~~---------g---~---~l~dl~ 322 (533)
.|+. .|+.-=.+..|- . ++..+ .-++|||---- .+|=-++|.+++..|-. | + .-.+|.
T Consensus 67 ~~~Lk~I~~~~~G~d~i-D-~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~ 144 (404)
T 1sc6_A 67 AEKLVAIGAFAIGTNQV-D-LDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEAR 144 (404)
T ss_dssp CSSCCEEEECSSCCTTB-C-HHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCST
T ss_pred CCCCcEEEECCcccCcc-C-HHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccC
Confidence 4665 565555555442 2 22223 34888886543 45555788888888741 1 0 112455
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..++.|+|-|..|..+|+.+... |+ +++.+|+..- ..+. -+ ....+|.|
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~~-----~~~~-----~~---------~~~~~l~e 193 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESL-----GM-------YVYFYDIENK-----LPLG-----NA---------TQVQHLSD 193 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCC-----CCCT-----TC---------EECSCHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEcCCch-----hccC-----Cc---------eecCCHHH
Confidence 59999999999999999988754 43 6888887321 0000 01 11247999
Q ss_pred HhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcE
Q 009519 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENI 465 (533)
Q Consensus 403 ~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Gra 465 (533)
+++. .|+++=.- ...+.|+++.++.|. +..++.=.|.=..--|-.-.+|++ +|+.
T Consensus 194 ll~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~ga~lIN~aRg~~vd~~aL~~aL~--~g~i 252 (404)
T 1sc6_A 194 LLNM--SDVVSLHVPENPSTKNMMGAKEISLMK----PGSLLINASRGTVVDIPALADALA--SKHL 252 (404)
T ss_dssp HHHH--CSEEEECCCSSTTTTTCBCHHHHHHSC----TTEEEEECSCSSSBCHHHHHHHHH--TTSE
T ss_pred HHhc--CCEEEEccCCChHHHHHhhHHHHhhcC----CCeEEEECCCChHHhHHHHHHHHH--cCCc
Confidence 9988 89887431 123789999999993 577888888644322222234444 5543
No 100
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.38 E-value=0.38 Score=47.65 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=60.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCCh---hhhccccccCCcCCccCCCC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDP---AAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~---~k~~~A~~~~~~~~~~~~~~ 399 (533)
.||.|+|||+.|.++|..|... |+. ..++++|++- ++ +.+.. +-..+... ... ....+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~~-----~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~--~~~--~~~~d 63 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GVA-----DDYVFIDANE----AKVKADQIDFQDAMANLEA--HGN--IVIND 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSH----HHHHHHHHHHHHHGGGSSS--CCE--EEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEcCCH----HHHHHHHHHHHhhhhhcCC--CeE--EEeCC
Confidence 3899999999999999988653 441 4799999841 11 01110 00011100 000 00235
Q ss_pred HHHHhcccCCcEEEEeccC-------CCCC-----------CHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 400 LLEVVRKVKPHVLLGLSGV-------GGVF-----------NEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~-------~g~F-----------teevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+ ++++. +|++|=+-.. +|.. -+++++.|.+ ++++.+|+-+|||..
T Consensus 64 ~-~~~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 64 W-AALAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE-SGFHGVLVVISNPVD 126 (309)
T ss_dssp G-GGGTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH
T ss_pred H-HHhCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCcHH
Confidence 6 67776 8987743332 2211 2588888854 677778888999986
No 101
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.18 E-value=0.84 Score=48.87 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=63.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcccc-ccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~-~~~~~~~~~~~~~L~e 402 (533)
.+|.|+|+|..|.++|..|.+. |. +++++|+.- +.-..+.. .... .+.....++.|
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----------~~~~~l~~~~~~~-~gi~~~~s~~e 67 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----------SKVDHFLANEAKG-KSIIGATSIED 67 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----------HHHHHHHHTTTTT-SSEECCSSHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHcccccC-CCeEEeCCHHH
Confidence 5899999999999999998763 53 577777631 11111211 0000 01112357888
Q ss_pred Hhccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+++.. +||++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 68 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~ 113 (497)
T 2p4q_A 68 FISKLKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHF 113 (497)
T ss_dssp HHHTSCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhcCCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence 88753 478776 4443455778888888654455678888988654
No 102
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.16 E-value=0.37 Score=47.02 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999988764 53 68888874
No 103
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=89.10 E-value=0.42 Score=50.27 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=78.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHH-HcCCChhhhcCeEEEEeccCccccCCCC-CChhhhccccccCCcCCccCCCCHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAAR-MAGNNDAFARNKFFLLDKDGLITKERKN-LDPAAAPFAKDPGDFMGLREGASLL 401 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~-~~Gls~~eA~~~i~lvD~~GLi~~~r~~-l~~~k~~~A~~~~~~~~~~~~~~L~ 401 (533)
.||.|+|||+. ++..++..+.. ..++. -..|+|+|.+- +|.. ..+....+++..... ....++.
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v---~~t~d~~ 68 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKV---LISDTFE 68 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEE---EECSSHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEE---EEeCCHH
Confidence 69999999995 66655444442 24542 25799999742 2200 111111111111111 1135788
Q ss_pred HHhcccCCcEEEEeccCCC---------------CC-------------------CHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 402 EVVRKVKPHVLLGLSGVGG---------------VF-------------------NEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g---------------~F-------------------teevv~~Ma~~~~erPIIFaLSNPt 447 (533)
+++++ +|++|=..++++ .+ =.++++.|.+ ++ ..+|+-.|||.
T Consensus 69 ~al~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~-~~-~A~lin~TNPv 144 (417)
T 1up7_A 69 GAVVD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRK-TS-NATIVNFTNPS 144 (417)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH-TT-CCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHH-HC-CEEEEEeCChH
Confidence 99998 999986665542 22 3588899964 99 99999999998
Q ss_pred CcccCCHHHHhcccCCcEEEecC
Q 009519 448 MNAECTAADAFKHAGENIVFASG 470 (533)
Q Consensus 448 ~~aE~tpe~A~~wt~Grai~AtG 470 (533)
. +..+-+++.+.-.-+|.+|
T Consensus 145 d---i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 145 G---HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp H---HHHHHHHHTTCCSSEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 6 5556666777443677776
No 104
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.05 E-value=0.45 Score=46.32 Aligned_cols=95 Identities=14% Similarity=0.116 Sum_probs=52.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|.++|..|... |. +++++|++- +....+++.. .....++.|+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~~----------~~~~~~~~~g-----~~~~~~~~~~ 56 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLVQ----------SAVDGLVAAG-----ASAARSARDA 56 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSSH----------HHHHHHHHTT-----CEECSSHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCCH----------HHHHHHHHCC-----CeEcCCHHHH
Confidence 5899999999999999998763 43 688887631 1111121111 0123467777
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHH---HhhhcCCCCCeEEecCCCCC
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLK---AMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~---~Ma~~~~erPIIFaLSNPt~ 448 (533)
++. +|++| ++.....-.++++. .+.+...+..+|..+|+-.+
T Consensus 57 ~~~--aDvvi-~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~ 101 (302)
T 2h78_A 57 VQG--ADVVI-SMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAP 101 (302)
T ss_dssp HTT--CSEEE-ECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCH
T ss_pred HhC--CCeEE-EECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCH
Confidence 766 67665 22211223344554 33332345567776766443
No 105
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.98 E-value=0.4 Score=42.23 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|..|..+|+.|... | .+++++|++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-----g-------~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-----G-------HSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 7999999999999999988653 4 278889874
No 106
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.83 E-value=0.64 Score=45.82 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=56.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccc---ccc--C-CcCCccCC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA---KDP--G-DFMGLREG 397 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A---~~~--~-~~~~~~~~ 397 (533)
.||.|+|+|..|..+|..|... | .+++++|++.= .+...+.... ... . ........
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ------RIKEIQDRGAIIAEGPGLAGTAHPDLLT 66 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH------HHHHHHHHTSEEEESSSCCEEECCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH------HHHHHHhcCCeEEeccccccccccceec
Confidence 6899999999999999887653 4 25888877421 0111111000 000 0 00000013
Q ss_pred CCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
.++.++++. +|++| ++. +....+++++.+++...+..+|+.+.|
T Consensus 67 ~~~~~~~~~--~D~vi-~~v-~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 67 SDIGLAVKD--ADVIL-IVV-PAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp SCHHHHHTT--CSEEE-ECS-CGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred CCHHHHHhc--CCEEE-EeC-CchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 568888876 88877 332 333458888888654455666776755
No 107
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.64 E-value=1.2 Score=44.23 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.++|..|... |. ++++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999999865 42 378888873
No 108
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.47 E-value=2.1 Score=43.50 Aligned_cols=157 Identities=16% Similarity=0.200 Sum_probs=90.4
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCC
Q 009519 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
+|...+|.|+|.|..|..+|+.+... |+ +++.+|+..- . .. .+ ....+
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~dr~~~----~--~~----g~----------~~~~~ 208 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAF-----DC-------PISYFSRSKK----P--NT----NY----------TYYGS 208 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSSCC----T--TC----CS----------EEESC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEECCCch----h--cc----Cc----------eecCC
Confidence 44459999999999999999988643 43 6888886421 1 10 00 01246
Q ss_pred HHHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEE-----EecC
Q 009519 400 LLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV-----FASG 470 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai-----~AtG 470 (533)
|.|+++. .|+++=.- ...+.++++.++.|. +..+|.-.|.-..--|-.-.+|++ +|+.- |-.+
T Consensus 209 l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk----~gailIn~srG~~vd~~aL~~aL~--~g~i~ga~lDv~~~ 280 (333)
T 3ba1_A 209 VVELASN--SDILVVACPLTPETTHIINREVIDALG----PKGVLINIGRGPHVDEPELVSALV--EGRLGGAGLDVFER 280 (333)
T ss_dssp HHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC----TTCEEEECSCGGGBCHHHHHHHHH--HTSSCEEEESCCTT
T ss_pred HHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC----CCCEEEECCCCchhCHHHHHHHHH--cCCCeEEEEecCCC
Confidence 8999987 89877432 124788899999993 567887777654422222334433 33321 1122
Q ss_pred CCCcceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCC
Q 009519 471 SPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNE 529 (533)
Q Consensus 471 SPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~ 529 (533)
-|.++ ..--+..|+.+-|=++-....+ ...|...+++.|.+....+
T Consensus 281 EP~~~--------~~L~~~~nviltPH~~~~t~e~-----~~~~~~~~~~nl~~~~~g~ 326 (333)
T 3ba1_A 281 EPEVP--------EKLFGLENVVLLPHVGSGTVET-----RKVMADLVVGNLEAHFSGK 326 (333)
T ss_dssp TTCCC--------GGGGGCTTEEECSSCTTCSHHH-----HHHHHHHHHHHHHHHHHTC
T ss_pred CCCCc--------chhhcCCCEEECCcCCCCCHHH-----HHHHHHHHHHHHHHHHcCC
Confidence 23211 1122457888888776422211 2445555666665544433
No 109
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.43 E-value=2 Score=44.09 Aligned_cols=202 Identities=17% Similarity=0.144 Sum_probs=115.6
Q ss_pred CCCc-eeeeecCCCchHHHHHHHHhccCceeccCc---chhHHHHHHHHHHHHHH--------------------hCCCC
Q 009519 263 WPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRA--------------------QGLSL 318 (533)
Q Consensus 263 ~P~~-~I~~EDf~~~~af~iL~ryr~~~~~FnDDi---QGTaaV~LAgli~Alr~--------------------~g~~l 318 (533)
.|+. .|+.--.+..|- .+-.--+.-+.+.|--- +.+|=-+++-+++..|- .+..|
T Consensus 84 ~p~Lk~i~~~g~G~d~i-d~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l 162 (351)
T 3jtm_A 84 AKNLKLLLTAGIGSDHI-DLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDL 162 (351)
T ss_dssp CSSCCEEEESSSCCTTB-CHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCS
T ss_pred CCCCeEEEEeCeeeccc-CHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccc
Confidence 5665 666555555442 22111123466665322 23444578888887763 13445
Q ss_pred CCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCC
Q 009519 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~ 398 (533)
.. .+|.|+|.|..|..+|+.+... |+ +++.+|+... +.. .+.... .....
T Consensus 163 ~g---ktvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~~--------~~~---~~~~~g----~~~~~ 212 (351)
T 3jtm_A 163 EG---KTIGTVGAGRIGKLLLQRLKPF-----GC-------NLLYHDRLQM--------APE---LEKETG----AKFVE 212 (351)
T ss_dssp TT---CEEEEECCSHHHHHHHHHHGGG-----CC-------EEEEECSSCC--------CHH---HHHHHC----CEECS
T ss_pred cC---CEEeEEEeCHHHHHHHHHHHHC-----CC-------EEEEeCCCcc--------CHH---HHHhCC----CeEcC
Confidence 55 9999999999999999988754 44 5887876421 111 111100 00124
Q ss_pred CHHHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCc
Q 009519 399 SLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE 474 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~ 474 (533)
+|.|+++. .|+++=.- ...+.|+++.++.|. +..+|.=.|+-..--|-.-.+|++ +|+.--|.--=|.
T Consensus 213 ~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~ 284 (351)
T 3jtm_A 213 DLNEMLPK--CDVIVINMPLTEKTRGMFNKELIGKLK----KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWD 284 (351)
T ss_dssp CHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCS
T ss_pred CHHHHHhc--CCEEEECCCCCHHHHHhhcHHHHhcCC----CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCC
Confidence 79999988 89987331 224789999999993 678988888755433444445554 5654433322222
Q ss_pred ceecCCCeeeecccccceeechhhhHHHHHh
Q 009519 475 NVDLGNGKIGHVNQANNMYLFPGIGLGTLLS 505 (533)
Q Consensus 475 pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~ 505 (533)
+-..+.. ..--+..|+.+-|=++-....+
T Consensus 285 ~EP~~~~--~pL~~~~nvilTPHia~~t~ea 313 (351)
T 3jtm_A 285 PQPAPKD--HPWRYMPNQAMTPHTSGTTIDA 313 (351)
T ss_dssp SSSCCTT--CGGGTSTTBCCCCSCGGGSHHH
T ss_pred CCCCCCC--ChhhcCCCEEECCcCCCCCHHH
Confidence 2111101 1112466899999876554443
No 110
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.03 E-value=0.76 Score=43.66 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=57.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHh
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVV 404 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V 404 (533)
||.|+|+|..|..+|..|.+. | .+++++|+.- .+ +...+..... ...+.......+ .+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~--~~~l~~~~~~-~~~~~~~~~~~~-~~~~ 61 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QP--YCSVNLVETD-GSIFNESLTAND-PDFL 61 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CS--EEEEEEECTT-SCEEEEEEEESC-HHHH
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cc--eeeEEEEcCC-CceeeeeeeecC-cccc
Confidence 799999999999999988753 4 2688888742 11 1111000000 000000001122 4667
Q ss_pred cccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 405 RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 405 ~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+. +|++| ++..+. -.+++++.++....+..+|..++|...
T Consensus 62 ~~--~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 62 AT--SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp HT--CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred CC--CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 65 88877 333233 368999988654455677777899654
No 111
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=87.98 E-value=4.9 Score=41.08 Aligned_cols=219 Identities=16% Similarity=0.104 Sum_probs=127.6
Q ss_pred HhCCCc-eeeeecCCCchHHHHHHHHhccCceeccCc---chhHHHHHHHHHHHHHHh---------CCC----------
Q 009519 261 ARWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GLS---------- 317 (533)
Q Consensus 261 ~~~P~~-~I~~EDf~~~~af~iL~ryr~~~~~FnDDi---QGTaaV~LAgli~Alr~~---------g~~---------- 317 (533)
...|+. .|+.--.+..|- .+-.--+.-+.|.|--- ..+|=-+++.+++..|-. |.-
T Consensus 81 ~~~~~Lk~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 159 (347)
T 1mx3_A 81 EKFKALRIIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREV 159 (347)
T ss_dssp TTCSSCCEEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHH
T ss_pred hhCCCCCEEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccccccccccc
Confidence 345776 888888777763 22222233477777533 345555788899888732 210
Q ss_pred ---CCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCc
Q 009519 318 ---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (533)
Q Consensus 318 ---l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~ 394 (533)
..+|...+|.|+|.|..|..+|+.+... |+ +++.+|++- .. .....+ ..
T Consensus 160 ~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~----~~----~~~~~~---g~----- 211 (347)
T 1mx3_A 160 ASGAARIRGETLGIIGLGRVGQAVALRAKAF-----GF-------NVLFYDPYL----SD----GVERAL---GL----- 211 (347)
T ss_dssp TTTCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTTS----CT----THHHHH---TC-----
T ss_pred ccCccCCCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCCc----ch----hhHhhc---CC-----
Confidence 1355669999999999999999988653 44 688887531 11 111111 00
Q ss_pred cCCCCHHHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEe--
Q 009519 395 REGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-- 468 (533)
Q Consensus 395 ~~~~~L~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~A-- 468 (533)
....+|.|+++. .|+++=.- ...++++++.++.|. +..++.-.|+=..--|..-.+|.+ +|+.--|
T Consensus 212 ~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~l 283 (347)
T 1mx3_A 212 QRVSTLQDLLFH--SDCVTLHCGLNEHNHHLINDFTVKQMR----QGAFLVNTARGGLVDEKALAQALK--EGRIRGAAL 283 (347)
T ss_dssp EECSSHHHHHHH--CSEEEECCCCCTTCTTSBSHHHHTTSC----TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEE
T ss_pred eecCCHHHHHhc--CCEEEEcCCCCHHHHHHhHHHHHhcCC----CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEE
Confidence 012469999987 89887432 224789999999883 577888888755533444445544 4543322
Q ss_pred ---cCCCCcceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccC
Q 009519 469 ---SGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNC 527 (533)
Q Consensus 469 ---tGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~ 527 (533)
..-|+++ . +. .--..+|+.+-|=++-.. ....++|...+++-+.+...
T Consensus 284 DV~~~EP~~~---~-~~--~L~~~~nvi~tPHia~~t-----~~~~~~~~~~~~~ni~~~~~ 334 (347)
T 1mx3_A 284 DVHESEPFSF---S-QG--PLKDAPNLICTPHAAWYS-----EQASIEMREEAAREIRRAIT 334 (347)
T ss_dssp SCCSSSSCCT---T-SS--TTTTCSSEEECSSCTTCC-----HHHHHHHHHHHHHHHHHHHH
T ss_pred eecccCCCCC---C-Cc--hHHhCCCEEEEchHHHHH-----HHHHHHHHHHHHHHHHHHHc
Confidence 2223221 0 11 112479999999876422 22224555555555554443
No 112
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.87 E-value=0.95 Score=47.85 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=62.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|.+. |. +++++|+.- +.+...+..+. . .+.....++.|+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~~------~~~~~l~~~~~--~---~gi~~~~s~~e~ 62 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRTT------SKTEEVFKEHQ--D---KNLVFTKTLEEF 62 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH------HHHHHHHHHTT--T---SCEEECSSHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCCH------HHHHHHHHhCc--C---CCeEEeCCHHHH
Confidence 6899999999999999988753 43 577777631 11111111110 0 011123578888
Q ss_pred hccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++.. ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 63 v~~l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~ 107 (474)
T 2iz1_A 63 VGSLEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTHF 107 (474)
T ss_dssp HHTBCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 8753 478877 4444455677888877543445668888998764
No 113
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.69 E-value=0.59 Score=44.54 Aligned_cols=97 Identities=14% Similarity=0.151 Sum_probs=58.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..+... |. +.++++|++. +.+. .+++... .....++.|+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~------~~~~----~~~~~~g----~~~~~~~~~~ 65 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE------ESAR----ELAQKVE----AEYTTDLAEV 65 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH------HHHH----HHHHHTT----CEEESCGGGS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH------HHHH----HHHHHcC----CceeCCHHHH
Confidence 6999999999999999988754 43 2377787631 1111 1111100 0112456677
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~ 449 (533)
++. +|++|=+. .+.. .+++++.+.+...+..+|.-+||-.+.
T Consensus 66 ~~~--~Dvvi~av-~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~~ 107 (266)
T 3d1l_A 66 NPY--AKLYIVSL-KDSA-FAELLQGIVEGKREEALMVHTAGSIPM 107 (266)
T ss_dssp CSC--CSEEEECC-CHHH-HHHHHHHHHTTCCTTCEEEECCTTSCG
T ss_pred hcC--CCEEEEec-CHHH-HHHHHHHHHhhcCCCcEEEECCCCCch
Confidence 765 78877333 2333 388888875433366788888885553
No 114
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.65 E-value=1 Score=42.12 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=26.3
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..||.|+|+|..|..+|..|.+. | .+++++|++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 38999999999999999988653 4 268888763
No 115
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.59 E-value=0.27 Score=54.54 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=30.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.||+|+|||..|..+|+.|+.+++ .+|.++|.+=
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGV-----------G~ItLvD~D~ 360 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNGT 360 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEcCCC
Confidence 899999999999999999988755 6999999863
No 116
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.53 E-value=0.34 Score=48.61 Aligned_cols=125 Identities=23% Similarity=0.346 Sum_probs=74.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||.|+|||+.|.++|..|... |+- ..+.++|.+-=..++. -++.+....|-.+. .. ....+ .++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d-~~a 66 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYP-KI---VGGAD-YSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCC-EE---EEESC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCC-EE---EEeCC-HHH
Confidence 799999999999999887653 431 3799999742111100 01222111121111 01 11235 788
Q ss_pred hcccCCcEEEEeccC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--CcEEE
Q 009519 404 VRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIVF 467 (533)
Q Consensus 404 V~~vkptvLIG~S~~---~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Grai~ 467 (533)
+++ +|++|=+.+. +|- .-+++++.|.+ ++++-+|+-.|||.. +...-+++.+. -+-+|
T Consensus 67 ~~~--aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvsNPvd---~~t~~~~k~~g~p~~rvi 140 (294)
T 1oju_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVE-NAPESKILVVTNPMD---VMTYIMWKESGKPRNEVF 140 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT-TSTTCEEEECSSSHH---HHHHHHHHHSCCCTTSEE
T ss_pred hCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcch---HHHHHHHHhcCCCHHHEe
Confidence 888 8987744333 342 12466677754 899999999999986 45566666542 24577
Q ss_pred ecC
Q 009519 468 ASG 470 (533)
Q Consensus 468 AtG 470 (533)
++|
T Consensus 141 G~g 143 (294)
T 1oju_A 141 GMG 143 (294)
T ss_dssp ECS
T ss_pred ecc
Confidence 776
No 117
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.53 E-value=0.58 Score=45.36 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5899999999999999988764 42 67777763
No 118
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.46 E-value=0.47 Score=44.56 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=56.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEE-EeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~l-vD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|+|..|..+|..|.+. |. ++++ +|++ .+.+......+-- ....+..|
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~------~~~~~~l~~~~g~--------~~~~~~~~ 77 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG------PASLSSVTDRFGA--------SVKAVELK 77 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC------GGGGHHHHHHHTT--------TEEECCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC------HHHHHHHHHHhCC--------CcccChHH
Confidence 5899999999999999988753 43 4554 5442 1112221111110 01123456
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+++. +|++| ++. +....+++++.++. .+..+|+.++||.+
T Consensus 78 ~~~~--aDvVi-lav-p~~~~~~v~~~l~~--~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 78 DALQ--ADVVI-LAV-PYDSIADIVTQVSD--WGGQIVVDASNAID 117 (220)
T ss_dssp HHTT--SSEEE-EES-CGGGHHHHHTTCSC--CTTCEEEECCCCBC
T ss_pred HHhc--CCEEE-EeC-ChHHHHHHHHHhhc--cCCCEEEEcCCCCC
Confidence 6766 88877 333 45566788887753 34569999999984
No 119
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=87.46 E-value=1.5 Score=44.88 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=67.9
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccc
Q 009519 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (533)
Q Consensus 306 gli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A 385 (533)
+.+++..... ... .++.|+|+|..|..++..+... .+. ++|+++|+. .+ ........|.
T Consensus 117 s~laa~~la~--~~~---~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~--~a~~la~~~~ 175 (350)
T 1x7d_A 117 SLMAAQALAR--PNA---RKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PL--ATAKLIANLK 175 (350)
T ss_dssp HHHHHHHHSC--TTC---CEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HH--HHHHHHHHHT
T ss_pred HHHHHHHhcc--ccC---CeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH--HHHHHHHHHH
Confidence 4455544432 345 7999999999999988776543 233 578888762 11 1122222221
Q ss_pred cccCCcCCccCCCCHHHHhcccCCcEEEEeccCC---CCCCHHHHHHhhhcCCCCCeEEecCC--CCCcccCCHHH
Q 009519 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG---GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAAD 456 (533)
Q Consensus 386 ~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~---g~Fteevv~~Ma~~~~erPIIFaLSN--Pt~~aE~tpe~ 456 (533)
... ... .....++.|+++. +|++|=++..+ -.|+.++ ..+.-.|+.++. |. +.|+.++-
T Consensus 176 ~~~-g~~-~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~-------l~~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 176 EYS-GLT-IRRASSVAEAVKG--VDIITTVTADKAYATIITPDM-------LEPGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp TCT-TCE-EEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGG-------CCTTCEEEECSCCBTT-BEEECHHH
T ss_pred hcc-Cce-EEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHH-------cCCCCEEEECCCCCCC-ceeeCHHH
Confidence 100 000 0124679999987 89998666532 1344322 234558888886 66 56887753
No 120
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.38 E-value=0.58 Score=45.18 Aligned_cols=97 Identities=11% Similarity=0.015 Sum_probs=57.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|... |.. .+++++|++.- .+.. +.+.... . ....++.|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~~~------~~~~----~~~~g~~-~--~~~~~~~~~ 63 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HPH-----YKIVGYNRSDR------SRDI----ALERGIV-D--EATADFKVF 63 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSSHH------HHHH----HHHTTSC-S--EEESCTTTT
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CCC-----cEEEEEcCCHH------HHHH----HHHcCCc-c--cccCCHHHh
Confidence 6899999999999999988754 211 36888886310 0111 1110000 0 012356667
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhhhc-CCCCCeEEecCCCC
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPT 447 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma~~-~~erPIIFaLSNPt 447 (533)
++. +|++| ++..+... +++++.+... ..+..||.-+||-.
T Consensus 64 ~~~--aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 64 AAL--ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp GGG--CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred hcC--CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 766 78877 44333333 8888888643 34567777777743
No 121
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=87.28 E-value=0.93 Score=47.49 Aligned_cols=106 Identities=13% Similarity=0.276 Sum_probs=58.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChh-hhcCeEEEEeccC-------ccccCCC---CCChhhhccccccCCcC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDA-FARNKFFLLDKDG-------LITKERK---NLDPAAAPFAKDPGDFM 392 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~-eA~~~i~lvD~~G-------Li~~~r~---~l~~~k~~~A~~~~~~~ 392 (533)
.||.|+|||+=|+++|..|.+-.. +.... +-.=++|..|..= .|...+. .|+..+.+ . .
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~---~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp----~-~-- 104 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCK---GYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP----D-N-- 104 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH---HCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC----S-S--
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC---CccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC----C-C--
Confidence 599999999999999999988643 11100 0001466554320 0111221 12222211 0 0
Q ss_pred CccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
..-..+|.|+++. .|++|= . +|-.|-+++++.+.....+..+|..++
T Consensus 105 -i~~t~dl~~al~~--ad~ii~-a-vPs~~~r~~l~~l~~~~~~~~~iv~~~ 151 (391)
T 4fgw_A 105 -LVANPDLIDSVKD--VDIIVF-N-IPHQFLPRICSQLKGHVDSHVRAISCL 151 (391)
T ss_dssp -EEEESCHHHHHTT--CSEEEE-C-SCGGGHHHHHHHHTTTSCTTCEEEECC
T ss_pred -cEEeCCHHHHHhc--CCEEEE-E-CChhhhHHHHHHhccccCCCceeEEec
Confidence 1123579999988 777652 2 355688888888864333444444444
No 122
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.08 E-value=0.73 Score=46.64 Aligned_cols=126 Identities=19% Similarity=0.248 Sum_probs=72.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+.|..++-+|+.. ++- ..++|+|.+-=-.++ ..+|.+. .+|..+.. -..+-.+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~-----~~~-----~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~------i~~~~~~ 72 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHTT-GGGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CCC-----CEEEEEeCCchHhHHHHHHHHHH-HHhcCCeE------EEECCHH
Confidence 6999999999999988877442 331 589999973100000 0012111 12221110 0113467
Q ss_pred HhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCcEE
Q 009519 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Grai 466 (533)
++++ +|++|=+.+.+ |- +-+++++.|.+ +++..+|+-.|||.. ...+-+++.+ .-.-+
T Consensus 73 a~~~--aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~s~~p~~rv 146 (326)
T 2zqz_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD---ILTYATWKLSGFPKNRV 146 (326)
T ss_dssp GGGG--CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGE
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCcHH---HHHHHHHHHcCCCHHHE
Confidence 7888 89988544433 31 22456666643 789999999999996 4455555543 11246
Q ss_pred EecCCC
Q 009519 467 FASGSP 472 (533)
Q Consensus 467 ~AtGSP 472 (533)
|.+|.-
T Consensus 147 iG~gt~ 152 (326)
T 2zqz_A 147 VGSGTS 152 (326)
T ss_dssp EECTTH
T ss_pred EEcccc
Confidence 677643
No 123
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.96 E-value=1 Score=47.70 Aligned_cols=101 Identities=17% Similarity=0.228 Sum_probs=62.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcccc-ccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~-~~~~~~~~~~~~~L~e 402 (533)
.||.|+|+|..|..+|..|.+. |. +++++|+.. +.+. .+.+ .... .+.....++.|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~------~~~~----~l~~~~~~g-~gi~~~~~~~e 59 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV------SKVD----DFLANEAKG-TKVLGAHSLEE 59 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST------HHHH----HHHHTTTTT-SSCEECSSHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH------HHHH----HHHhccccC-CCeEEeCCHHH
Confidence 5899999999999999988753 43 578887631 1111 1111 0000 01112357888
Q ss_pred Hhccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+++.+ ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 60 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~ 105 (482)
T 2pgd_A 60 MVSKLKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEY 105 (482)
T ss_dssp HHHHBCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred HHhhccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88622 488877 4443455677888877543445668888998765
No 124
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.93 E-value=0.32 Score=49.48 Aligned_cols=125 Identities=16% Similarity=0.242 Sum_probs=71.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||..|.++|..|.. .|+. .+.++|.+-=..++- .+|.+.. .+....... ....+. +
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~-----~~~~------~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v---~~t~d~-~ 71 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL-----KELG------DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKF---TGANDY-A 71 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCE---EEESSG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEE---EEeCCH-H
Confidence 799999999999999988765 3541 599999742111000 0122111 122111111 011344 7
Q ss_pred HhcccCCcEEEEecc---CCCC-----C------CHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--CcEE
Q 009519 403 VVRKVKPHVLLGLSG---VGGV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----F------teevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Grai 466 (533)
++++ +|++|=+.+ .+|. | -+++++.|.+ +++.-+|+-.|||.. +...-+++.+. -+-+
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvtNPvd---~~t~~~~k~sg~p~~rv 145 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKK-YAPEAFVICITNPLD---AMVWALQKFSGLPAHKV 145 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHHHCCCGGGE
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHH-HCCCeEEEecCCCcH---HHHHHHHHhcCCCHHHE
Confidence 8888 898774433 3342 1 2456667754 788899999999985 33444555441 1347
Q ss_pred EecC
Q 009519 467 FASG 470 (533)
Q Consensus 467 ~AtG 470 (533)
|++|
T Consensus 146 iG~~ 149 (324)
T 3gvi_A 146 VGMA 149 (324)
T ss_dssp EECC
T ss_pred Eeec
Confidence 7777
No 125
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.90 E-value=0.83 Score=46.02 Aligned_cols=127 Identities=20% Similarity=0.273 Sum_probs=72.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+.|..++-+|+.. ++- ..|+|+|.+-=-.++ ..+|.+.. +|..+.. -..+..+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~------v~~~~~~ 68 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GIA-----EEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKK------IYSGEYS 68 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHGGG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CCC-----CEEEEEeCCchHHHHHHHHHHHHH-HhcCCeE------EEECCHH
Confidence 5999999999999988876543 431 579999973100000 00121111 2321110 0113467
Q ss_pred HhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCcEE
Q 009519 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Grai 466 (533)
++++ +|++|=+.+.+ |- +-+++++.|.+ +++..+|+-.|||.. ...+-+++.+ .-+-+
T Consensus 69 a~~~--aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~s~~p~~rv 142 (318)
T 1ez4_A 69 DCKD--ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVD-SGFDGIFLVAANPVD---ILTYATWKFSGFPKERV 142 (318)
T ss_dssp GGTT--CSEEEECCCC----------CHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGE
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEeCCcHH---HHHHHHHHHcCCCHHHE
Confidence 7877 89988444333 31 23456666654 789999999999996 4455565643 11246
Q ss_pred EecCCCC
Q 009519 467 FASGSPF 473 (533)
Q Consensus 467 ~AtGSPf 473 (533)
|.+|.-.
T Consensus 143 iG~gt~L 149 (318)
T 1ez4_A 143 IGSGTSL 149 (318)
T ss_dssp EECTTHH
T ss_pred Eeccccc
Confidence 7776533
No 126
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.83 E-value=2.2 Score=42.74 Aligned_cols=123 Identities=20% Similarity=0.199 Sum_probs=70.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccC---CcCCccCCCCH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG---DFMGLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~---~~~~~~~~~~L 400 (533)
.||.|+|||+.|...|-+|+. .|+- ..++++|.+ .++ +......+.+... +.. -...+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~~-----~ev~L~Di~----~~~--~~g~~~dl~~~~~~~~~~~--i~~~~- 68 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQTA-----NELVLIDVF----KEK--AIGEAMDINHGLPFMGQMS--LYAGD- 68 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCS-----SEEEEECCC---------CCHHHHHHTTSCCCTTCEE--EC--C-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCC----hHH--HHHHHHHHHHhHHhcCCeE--EEECC-
Confidence 689999999999998887654 3431 479999975 222 2221122222110 000 01123
Q ss_pred HHHhcccCCcEEEEeccCC---CC-------C----CHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCc
Q 009519 401 LEVVRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GEN 464 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-------F----teevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Gr 464 (533)
.+++++ +|++|=+.+.+ |- . -+++++.|.+ +++.-+|+-.|||.. .+.+-+++.+ .-.
T Consensus 69 ~~a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~~~~~~k~s~~p~~ 142 (318)
T 1y6j_A 69 YSDVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMK-YYNHGVILVVSNPVD---IITYMIQKWSGLPVG 142 (318)
T ss_dssp GGGGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHH-HCCSCEEEECSSSHH---HHHHHHHHHHTCCTT
T ss_pred HHHhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHHcCCCHH
Confidence 566777 89988444333 32 1 2678888864 688899998999985 4445555543 112
Q ss_pred EEEecCC
Q 009519 465 IVFASGS 471 (533)
Q Consensus 465 ai~AtGS 471 (533)
-+|.+|.
T Consensus 143 rviG~gt 149 (318)
T 1y6j_A 143 KVIGSGT 149 (318)
T ss_dssp TEEECTT
T ss_pred HEeccCC
Confidence 4667654
No 127
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.80 E-value=0.31 Score=46.92 Aligned_cols=108 Identities=17% Similarity=0.113 Sum_probs=55.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|.+. | .+++++|++.--. +.+.....................+..|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 68 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPAHI---EAIRKNGLIADFNGEEVVANLPIFSPEEI 68 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHHHH---HHHHHHCEEEEETTEEEEECCCEECGGGC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHHHH---HHHHhCCEEEEeCCCeeEecceeecchhh
Confidence 4899999999999999888653 4 2688888742100 00100000000000000000000112222
Q ss_pred hccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
.+.+ ++|++| ++. +.-..+++++.+++...+..+|..++|...
T Consensus 69 ~~~~~~~d~vi-~~v-~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 69 DHQNEQVDLII-ALT-KAQQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CTTSCCCSEEE-ECS-CHHHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred cccCCCCCEEE-EEe-ccccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 2211 378776 333 223468888888654556778888998664
No 128
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.77 E-value=1.5 Score=46.96 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=65.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.+|.|+|+|..|.++|..|.+. |. +++++|+.- +.-..+++....-.......++.|+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~----------~~~~~l~~~g~~g~~i~~~~s~~e~ 62 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----------SKVDDFLANEAKGTKVVGAQSLKEM 62 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----------HHHHHHHHTTTTTSSCEECSSHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHhcccCCCceeccCCHHHH
Confidence 6899999999999999988764 53 577777631 1111122110000000113679999
Q ss_pred hccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++.+ +||++| ++..++...+++++.+.....+..||.-.||-.+
T Consensus 63 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 63 VSKLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEY 107 (484)
T ss_dssp HHTBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCc
Confidence 8753 488776 4433455778888888665667889999998664
No 129
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.73 E-value=0.29 Score=47.48 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=29.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.||+|+|+|..|..+|+.|+.+++ ++|.++|.+-
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv-----------~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGV-----------GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCC-----------CeEEEEcCCC
Confidence 899999999999999999987644 6899999874
No 130
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.70 E-value=0.45 Score=47.45 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=59.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChh--hhccccccCCcCCccCCCCH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPA--AAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~--k~~~A~~~~~~~~~~~~~~L 400 (533)
.||.|+|+|+.|..+|..|.+. | .++.++|+.--+..-+ ..+... ...+... . ....++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~---~---~~~~~~ 65 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTEDGATHTLP---V---RATHDA 65 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEEC---C---EEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEe---e---eEECCH
Confidence 6899999999999999988764 4 2688888631110000 001000 0000000 0 012456
Q ss_pred HHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
.+ ++. +|++| ++. +.-..+++++.++....+..+|..++|..
T Consensus 66 ~~-~~~--~D~Vi-lav-k~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 66 AA-LGE--QDVVI-VAV-KAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp HH-HCC--CSEEE-ECC-CHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred HH-cCC--CCEEE-EeC-CchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 66 454 78877 443 33467788888865455678999999995
No 131
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.62 E-value=0.87 Score=44.97 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6899999999999999998764 43 67888773
No 132
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.39 E-value=0.28 Score=47.71 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=29.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 8999999999999999999876 44 689999987
No 133
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.00 E-value=0.66 Score=45.82 Aligned_cols=47 Identities=17% Similarity=0.328 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.|+..+++..|.. .. .+++|+|||.+|.+++..|.+. |. ++|+++++
T Consensus 105 ~G~~~~l~~~~~~-~~---~~vlvlGaGgaarav~~~L~~~-----G~------~~i~v~nR 151 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KN---AKVIVHGSGGMAKAVVAAFKNS-----GF------EKLKIYAR 151 (271)
T ss_dssp HHHHHHHHHTTCC-TT---SCEEEECSSTTHHHHHHHHHHT-----TC------CCEEEECS
T ss_pred HHHHHHHHHhCCC-CC---CEEEEECCcHHHHHHHHHHHHC-----CC------CEEEEEeC
Confidence 4566666665543 44 7999999999999998887653 44 57998877
No 134
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.99 E-value=1.2 Score=44.65 Aligned_cols=94 Identities=20% Similarity=0.180 Sum_probs=56.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH-
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE- 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e- 402 (533)
.||.|+|+|..|..+|..|... |.. .+|+++|++- .+...++...... ....++.|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~~-----~~V~~~dr~~-----------~~~~~a~~~G~~~--~~~~~~~~~ 90 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDINP-----------ESISKAVDLGIID--EGTTSIAKV 90 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSCH-----------HHHHHHHHTTSCS--EEESCTTGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CCC-----CEEEEEECCH-----------HHHHHHHHCCCcc--hhcCCHHHH
Confidence 6999999999999999988753 542 3788888731 1111111100000 01245667
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
+++. +|++| ++..+. -.+++++.++....+..||.-.+
T Consensus 91 ~~~~--aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 91 EDFS--PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp GGGC--CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred hhcc--CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 7776 78877 444333 45677777754345666776555
No 135
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=85.86 E-value=0.32 Score=53.71 Aligned_cols=37 Identities=22% Similarity=0.413 Sum_probs=31.7
Q ss_pred CCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+|++ .||+|+|||..|..+|+.|+.+++ ++|.++|.+
T Consensus 324 kL~~---~kVLIVGaGGLGs~va~~La~aGV-----------G~ItLvD~D 360 (598)
T 3vh1_A 324 IIKN---TKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNG 360 (598)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHTTTC-----------CEEEEECCS
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEECCC
Confidence 4455 999999999999999999987654 699999976
No 136
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=85.77 E-value=0.83 Score=45.47 Aligned_cols=124 Identities=17% Similarity=0.213 Sum_probs=72.8
Q ss_pred eEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec--cCccccC-CCCCChhhhccccccCCcCCccCCCCH
Q 009519 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 325 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~--~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
||+|.| ||..|..++..|+. .|+- ..++|+|. +-=-.++ ..+|.+... +..+. .. ...+
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~-~v----~~~~- 64 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNT-RV----RQGG- 64 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCC-EE----EECC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCc-EE----EeCC-
Confidence 899999 99999998887654 2432 46999997 2100000 011221111 11110 00 0123
Q ss_pred HHHhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCc
Q 009519 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GEN 464 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Gr 464 (533)
.+++++ +|++|=+.+.+ |. .++++++.|.+ ++.+.+|+--|||.. ...+-+++.+ .-+
T Consensus 65 ~~a~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~p~~~viv~SNPv~---~~~~~~~~~~~~p~~ 138 (303)
T 1o6z_A 65 YEDTAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDE-HNDDYISLTTSNPVD---LLNRHLYEAGDRSRE 138 (303)
T ss_dssp GGGGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHT-TCSCCEEEECCSSHH---HHHHHHHHHSSSCGG
T ss_pred HHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEeCChHH---HHHHHHHHHcCCCHH
Confidence 667877 89988555433 32 46778888854 788999999999985 4445555543 112
Q ss_pred EEEecCC
Q 009519 465 IVFASGS 471 (533)
Q Consensus 465 ai~AtGS 471 (533)
-+|++|.
T Consensus 139 rviG~gt 145 (303)
T 1o6z_A 139 QVIGFGG 145 (303)
T ss_dssp GEEECCH
T ss_pred Heeeccc
Confidence 4777764
No 137
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.72 E-value=0.73 Score=46.07 Aligned_cols=124 Identities=19% Similarity=0.282 Sum_probs=67.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||.|+|||+.|.++|..|... |.. ..++++|.+-=-... ..++.+. .++.... .. ...+ .++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~~-----~~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~-~i----~~~d-~~~ 64 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GFA-----REMVLIDVDKKRAEGDALDLIHG-TPFTRRA-NI----YAGD-YAD 64 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSCCC-EE----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHHHHHhh-hhhcCCc-EE----EeCC-HHH
Confidence 799999999999999887653 431 379999974100000 0001000 0111000 00 0123 356
Q ss_pred hcccCCcEEEEeccCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCcEEE
Q 009519 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIVF 467 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Grai~ 467 (533)
++. +|++|=+-..+.. .-+++++.|.+ +++.-+|+-.|||... ..+-+.+.+ ...-+|
T Consensus 65 ~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~~---~~~~~~~~~~~~~~rvi 138 (319)
T 1a5z_A 65 LKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSK-YAPDSIVIVVTNPVDV---LTYFFLKESGMDPRKVF 138 (319)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHHH---HHHHHHHHHTCCTTTEE
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcHHH---HHHHHHHHhCCChhhEE
Confidence 666 8887743332221 12688888864 5777788889999973 223333443 223455
Q ss_pred ecCC
Q 009519 468 ASGS 471 (533)
Q Consensus 468 AtGS 471 (533)
.+|.
T Consensus 139 G~~t 142 (319)
T 1a5z_A 139 GSGT 142 (319)
T ss_dssp ECTT
T ss_pred eeCc
Confidence 6553
No 138
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=85.64 E-value=6 Score=40.53 Aligned_cols=197 Identities=16% Similarity=0.202 Sum_probs=114.2
Q ss_pred cCceeccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCchhHHHHHHHHHHHHH
Q 009519 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (533)
Q Consensus 288 ~~~~FnDDi---QGTaaV~LAgli~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~ 346 (533)
-+++.|--- +.+|=-+++-+++..|-. |. .-.+|...+|.|+|.|..|..+|+.+...
T Consensus 117 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~- 195 (345)
T 4g2n_A 117 GIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF- 195 (345)
T ss_dssp TCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT-
T ss_pred CEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC-
Confidence 366666432 335556788888877642 10 01345559999999999999999998754
Q ss_pred HHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEecc----CCCCC
Q 009519 347 ARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVF 422 (533)
Q Consensus 347 ~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~F 422 (533)
|+ +++.+|+... +... +.. . ....+|.|+++. .|+++=.-- ..+.|
T Consensus 196 ----G~-------~V~~~dr~~~--------~~~~---~~g-~-----~~~~~l~ell~~--sDvV~l~~Plt~~T~~li 245 (345)
T 4g2n_A 196 ----GL-------AIHYHNRTRL--------SHAL---EEG-A-----IYHDTLDSLLGA--SDIFLIAAPGRPELKGFL 245 (345)
T ss_dssp ----TC-------EEEEECSSCC--------CHHH---HTT-C-----EECSSHHHHHHT--CSEEEECSCCCGGGTTCB
T ss_pred ----CC-------EEEEECCCCc--------chhh---hcC-C-----eEeCCHHHHHhh--CCEEEEecCCCHHHHHHh
Confidence 43 6888887421 1111 111 0 012479999988 899874321 23889
Q ss_pred CHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCC-CcceecCCCeeeecccccceeechhhhHH
Q 009519 423 NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVDLGNGKIGHVNQANNMYLFPGIGLG 501 (533)
Q Consensus 423 teevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSP-f~pv~~~~G~~~~p~Q~NN~~iFPGiglG 501 (533)
+++.++.|. +..|+.=.|.-..--|-.-.+|++ +|+. .+.|-. |++-. + ....--+..|+.+-|=+|-.
T Consensus 246 ~~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i-~gA~LDVf~~EP-~--~~~pL~~~~nvilTPHia~~ 315 (345)
T 4g2n_A 246 DHDRIAKIP----EGAVVINISRGDLINDDALIEALR--SKHL-FAAGLDVFANEP-A--IDPRYRSLDNIFLTPHIGSA 315 (345)
T ss_dssp CHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSE-EEEEESCCTTTT-S--CCTTGGGCTTEEECCSCTTC
T ss_pred CHHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCc-eEEEecCCCCCC-C--CCchHHhCCCEEEcCccCcC
Confidence 999999993 678888888654422333344444 5653 332211 11100 0 11122346789999987643
Q ss_pred HHHhCCcccCHHHHHHHHHHHhcccCCCC
Q 009519 502 TLLSGARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 502 ~l~~~a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
...+ -..|...+++.|.+....++
T Consensus 316 t~e~-----~~~~~~~~~~ni~~~l~g~~ 339 (345)
T 4g2n_A 316 THET-----RDAMGWLLIQGIEALNQSDV 339 (345)
T ss_dssp BHHH-----HHHHHHHHHHHHHHHHTTCC
T ss_pred CHHH-----HHHHHHHHHHHHHHHHcCCC
Confidence 2221 24566666666666555443
No 139
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.62 E-value=0.57 Score=46.26 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=59.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+-|..+|..|.+. | .+++++|+.-+ ..=+ ..+.- ......-.+....-..++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~---~~~~g~~~~~~~~~~~~~~~ 66 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKV---FSINGDFTLPHVKGYRAPEE 66 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEE---EETTCCEEESCCCEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEE---EcCCCeEEEeeceeecCHHH
Confidence 5899999999999999888653 4 26888887531 0000 01100 00000000000001234544
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++. +|++| ++. +--..+++++.++....+..+|..+.|-..
T Consensus 67 -~~~--~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 67 -IGP--MDLVL-VGL-KTFANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp -HCC--CSEEE-ECC-CGGGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred -cCC--CCEEE-Eec-CCCCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 554 78877 554 344567899999765667788888999875
No 140
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.55 E-value=1 Score=47.79 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=62.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcccc-ccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~-~~~~~~~~~~~~~L~e 402 (533)
-||.|+|+|..|..+|..|.+. |. +++++|+..- .+......+-. +... +.....++.|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~~------~~~~l~~~~g~~~~~~--~i~~~~~~~e 61 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTYS------KSEEFMKANASAPFAG--NLKAFETMEA 61 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSHH------HHHHHHHHTTTSTTGG--GEEECSCHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCHH------HHHHHHHhcCCCCCCC--CeEEECCHHH
Confidence 3799999999999999988753 43 5788876311 01111100000 0000 0012357888
Q ss_pred Hhccc-CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+++.. ++|++| ++..++...+++++.+.....+..||..+||-.+
T Consensus 62 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 62 FAASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp HHHHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred HHhcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 88743 488877 4443455677888777543455678888998764
No 141
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=85.35 E-value=0.45 Score=48.72 Aligned_cols=34 Identities=26% Similarity=0.504 Sum_probs=30.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.||+|+|+|..|..+|+.|+.+++ .+|.++|.+=
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGv-----------g~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGI-----------GEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-----------CeEEEECCCc
Confidence 899999999999999999998755 6899999863
No 142
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=85.33 E-value=0.31 Score=51.74 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=63.8
Q ss_pred HhHHHHHHHHHHhCCCceeeeecCCCchHHHHHHHHhcc-Ccee--ccCcchhHHHHHHHHHHHHHHhCC-----CCCCC
Q 009519 250 SIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKR-FCMF--NDDIQGTAGVALAGLLGTVRAQGL-----SLTDF 321 (533)
Q Consensus 250 ~~vdefv~av~~~~P~~~I~~EDf~~~~af~iL~ryr~~-~~~F--nDDiQGTaaV~LAgli~Alr~~g~-----~l~dl 321 (533)
..+..+++.+...+|++ .|+-+......++-++|.-+ +|++ |+..-+.+.....-|...+..... ++.+-
T Consensus 133 ~~~~~~l~~~a~~~~~v--~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 210 (521)
T 1hyu_A 133 PDVVQALNLMAVLNPRI--KHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKR 210 (521)
T ss_dssp HHHHHHHHHHHHHCTTE--EEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTS
T ss_pred HHHHHHHHHHHhHcCce--EEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhccccccccccccc
Confidence 34556666666677854 34333334556788888654 6644 666667777666667665533210 01111
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
...+|+|+|||.||+..|..+.+ .|+ ++.++|+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~ 243 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGE 243 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEEC
Confidence 12689999999999999988765 354 5777775
No 143
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.29 E-value=0.96 Score=43.70 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=51.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|... |. +++++|++. +....+++.. .....++.|+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~----------~~~~~~~~~g-----~~~~~~~~~~ 57 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLME----------ANVAAVVAQG-----AQACENNQKV 57 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSSH----------HHHHHHHTTT-----CEECSSHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCCH----------HHHHHHHHCC-----CeecCCHHHH
Confidence 6899999999999999988653 43 577887631 1111111110 0112457777
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHH---HhhhcCCCCCeEEecCCCC
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLK---AMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~---~Ma~~~~erPIIFaLSNPt 447 (533)
++. +|++|=+. ....-.++++. .+.+...+..+|..+||-.
T Consensus 58 ~~~--~D~vi~~v-p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 58 AAA--SDIIFTSL-PNAGIVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp HHH--CSEEEECC-SSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred HhC--CCEEEEEC-CCHHHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 765 67766322 11222344442 2222233455677777655
No 144
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=85.18 E-value=0.8 Score=44.39 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.++|..|.+. |. +++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999998865 42 57777763
No 145
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=85.16 E-value=8 Score=39.30 Aligned_cols=218 Identities=15% Similarity=0.096 Sum_probs=121.1
Q ss_pred hCCCc-eeeeecCCCchHHHHHHHHhccCceeccCcc---hhHHHHHHHHHHHHHHh---------CC------CCCCCC
Q 009519 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL------SLTDFA 322 (533)
Q Consensus 262 ~~P~~-~I~~EDf~~~~af~iL~ryr~~~~~FnDDiQ---GTaaV~LAgli~Alr~~---------g~------~l~dl~ 322 (533)
..|+. .|+.--.+..|- .+..--+.-++|.|---- .+|=-+++.+++..|-. |. .-.+|.
T Consensus 86 ~~~~Lk~I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~ 164 (335)
T 2g76_A 86 AAEKLQVVGRAGTGVDNV-DLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 164 (335)
T ss_dssp HCSSCCEEEESSSSCTTB-CHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCT
T ss_pred hCCCCcEEEECCCCcchh-ChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCC
Confidence 46776 777666655552 222222335888886432 34455788888887742 10 012344
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..+|.|+|.|..|..+|+.+... |+ +++.+|+.. +.. .+.... ....+|.|
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~---~~~~~g-----~~~~~l~e 215 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF-----GM-------KTIGYDPII---------SPE---VSASFG-----VQQLPLEE 215 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSSS---------CHH---HHHHTT-----CEECCHHH
T ss_pred cCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCCc---------chh---hhhhcC-----ceeCCHHH
Confidence 49999999999999999988643 43 688887631 111 111100 01247999
Q ss_pred HhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEe-----cCCCC
Q 009519 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-----SGSPF 473 (533)
Q Consensus 403 ~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~A-----tGSPf 473 (533)
+++. .|+++=.- ...+.|+++.++.|. +..++.=.|.-..--|..-.+|.+ +|+.--| .+-|.
T Consensus 216 ll~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~vvd~~aL~~aL~--~g~i~gA~lDV~~~EP~ 287 (335)
T 2g76_A 216 IWPL--CDFITVHTPLLPSTTGLLNDNTFAQCK----KGVRVVNCARGGIVDEGALLRALQ--SGQCAGAALDVFTEEPP 287 (335)
T ss_dssp HGGG--CSEEEECCCCCTTTTTSBCHHHHTTSC----TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSC
T ss_pred HHhc--CCEEEEecCCCHHHHHhhCHHHHhhCC----CCcEEEECCCccccCHHHHHHHHH--hCCccEEEEeecCCCCC
Confidence 9987 89988442 124788899999883 577888888744322222233433 4443211 12221
Q ss_pred cceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCCC
Q 009519 474 ENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 474 ~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
. . ..--+..|+.+-|=++-.... -...|...+++.|.+....++
T Consensus 288 -----~-~--~~L~~~~nvilTPH~~~~t~e-----~~~~~~~~~~~nl~~~~~g~~ 331 (335)
T 2g76_A 288 -----R-D--RALVDHENVISCPHLGASTKE-----AQSRCGEEIAVQFVDMVKGKS 331 (335)
T ss_dssp -----S-C--CHHHHSTTEEECSSCTTCBHH-----HHHHHHHHHHHHHHHHC----
T ss_pred -----C-C--chHHhCCCEEECCcCCCCCHH-----HHHHHHHHHHHHHHHHHcCCC
Confidence 0 0 111246789999977632111 124456666666666554443
No 146
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.02 E-value=3.7 Score=41.03 Aligned_cols=160 Identities=17% Similarity=0.120 Sum_probs=97.6
Q ss_pred CCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCC
Q 009519 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~ 398 (533)
.+|...+|.|+|.|..|..+|+.+... |+ +++.+|+..- . ... ++ ...
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~----~--~~~-----~~---------~~~ 165 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSSV----D--QNV-----DV---------ISE 165 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSCC----C--TTC-----SE---------ECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEecccc----c--ccc-----cc---------ccC
Confidence 445559999999999999999998765 43 7888887421 1 110 11 124
Q ss_pred CHHHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCc
Q 009519 399 SLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE 474 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~ 474 (533)
+|.|+++. .|+++=.- ...+.++++.++.|. +..+|.=.|.-..--|-.-.+|++ +|+.-.|.=--|+
T Consensus 166 ~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~ga~lDV~~ 237 (290)
T 3gvx_A 166 SPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR----KNLTIVNVARADVVSKPDMIGFLK--ERSDVWYLSDVWW 237 (290)
T ss_dssp SHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC----TTCEEEECSCGGGBCHHHHHHHHH--HCTTCEEEESCCT
T ss_pred ChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh----cCceEEEeehhcccCCcchhhhhh--hccceEEeecccc
Confidence 79999988 89887332 124789999999993 678888888754432333344444 3443322111111
Q ss_pred ceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccC
Q 009519 475 NVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNC 527 (533)
Q Consensus 475 pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~ 527 (533)
+ + + . ..--+..|+.+-|=++=| ....-.+.|...+++-|.+...
T Consensus 238 ~-E-P-~--~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~~ 281 (290)
T 3gvx_A 238 N-E-P-E--ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFFE 281 (290)
T ss_dssp T-T-T-S--CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHTC
T ss_pred C-C-c-c--cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhhc
Confidence 0 0 0 0 122356789999987611 2234457788778877766544
No 147
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=84.89 E-value=0.87 Score=44.61 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 303 ~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
...|++.+++..+.+++. .+++|.|||.+|.++|..|.+ .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~---k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKD---KNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCS---CEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678899999988887777 999999998666666666543 23 58888774
No 148
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.77 E-value=0.94 Score=44.99 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.||.|+|+|..|.++|..|... |. +++++|+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr 62 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNR 62 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcC
Confidence 6999999999999999998764 43 5777776
No 149
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.62 E-value=0.26 Score=50.53 Aligned_cols=126 Identities=14% Similarity=0.131 Sum_probs=74.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||..|.++|..++.. |+- ..+.++|.+-=..++. .+|.+. ..|..... . ....++++
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-----g~~-----~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~-i---~~t~d~~~ 86 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-----DLA-----DEVALVDVMEDKLKGEMMDLEHG-SLFLHTAK-I---VSGKDYSV 86 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-----CCC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSCCSE-E---EEESSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECCHHHHHHHHHHhhhh-hhcccCCe-E---EEcCCHHH
Confidence 6999999999999999988763 442 3799999731000000 122221 12322110 0 01234444
Q ss_pred HhcccCCcEEE---EeccCCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCC---cE
Q 009519 403 VVRKVKPHVLL---GLSGVGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGE---NI 465 (533)
Q Consensus 403 ~V~~vkptvLI---G~S~~~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~G---ra 465 (533)
+++ +|++| |+...+|- .-+++++.+.+ +++..+|+-.|||.. +...-+++.+ | +-
T Consensus 87 -~~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k-~~P~a~ilvvtNPvd---i~t~~~~k~s-g~p~~r 158 (330)
T 3ldh_A 87 -SAG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVK-HSPDCLKELHPELGT---DKNKQDWKLS-GLPMHR 158 (330)
T ss_dssp -CSS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHHH-CCCGGG
T ss_pred -hCC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh-hCCCceEEeCCCccH---HHHHHHHHHh-CCCHHH
Confidence 666 89988 33333331 23556677754 789999999999985 5556666665 3 45
Q ss_pred EEecCCC
Q 009519 466 VFASGSP 472 (533)
Q Consensus 466 i~AtGSP 472 (533)
+|.+|.-
T Consensus 159 ViG~gt~ 165 (330)
T 3ldh_A 159 IIGSGCN 165 (330)
T ss_dssp EECCTTH
T ss_pred eecccCc
Confidence 7777633
No 150
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=84.62 E-value=3.2 Score=41.90 Aligned_cols=142 Identities=16% Similarity=0.121 Sum_probs=88.0
Q ss_pred eeeeecCCCchHHHHHHHHh-ccCceeccCcc---hhHHHHHHHHHHHHHH---------hCC-------CCCCCCCceE
Q 009519 267 IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRA---------QGL-------SLTDFADQKI 326 (533)
Q Consensus 267 ~I~~EDf~~~~af~iL~ryr-~~~~~FnDDiQ---GTaaV~LAgli~Alr~---------~g~-------~l~dl~~~ri 326 (533)
.|+.--.+..|- . ++..+ .-+++.|---. .+|=-+++.+++..|- .|. .-.+|...+|
T Consensus 72 ~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~v 149 (331)
T 1xdw_A 72 YILTRTAGTDHI-D-KEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTV 149 (331)
T ss_dssp EEEESSSCCTTB-C-HHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEE
T ss_pred EEEEcccccccc-C-HHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEE
Confidence 555555554442 1 12222 34777664332 3444578888887762 111 1134555999
Q ss_pred EEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcc
Q 009519 327 VVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRK 406 (533)
Q Consensus 327 v~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~ 406 (533)
.|+|.|..|..+|+.+... |+ +++.+|+.. .. .+ + .++ ...+|.|+++.
T Consensus 150 gIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~~---~-~~~----------~~~~l~ell~~ 198 (331)
T 1xdw_A 150 GVVGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-GI---E-DYC----------TQVSLDEVLEK 198 (331)
T ss_dssp EEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-SC---T-TTC----------EECCHHHHHHH
T ss_pred EEECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-HH---H-hcc----------ccCCHHHHHhh
Confidence 9999999999999988754 43 688888742 11 11 1 111 12369999987
Q ss_pred cCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 009519 407 VKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (533)
Q Consensus 407 vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt 447 (533)
.|+++=.- ...+.++++.++.|. +..++.=.|.-.
T Consensus 199 --aDvV~~~~p~t~~t~~li~~~~l~~mk----~ga~lin~srg~ 237 (331)
T 1xdw_A 199 --SDIITIHAPYIKENGAVVTRDFLKKMK----DGAILVNCARGQ 237 (331)
T ss_dssp --CSEEEECCCCCTTTCCSBCHHHHHTSC----TTEEEEECSCGG
T ss_pred --CCEEEEecCCchHHHHHhCHHHHhhCC----CCcEEEECCCcc
Confidence 89988531 224889999999993 577888888543
No 151
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.61 E-value=2.9 Score=42.24 Aligned_cols=90 Identities=16% Similarity=0.256 Sum_probs=58.9
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCC
Q 009519 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
+|...+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ..+.... . ...+
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~g-~----~~~~ 193 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPF-----GV-------KLYYWSRHR---------KV---NVEKELK-A----RYMD 193 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSC---------CH---HHHHHHT-E----EECC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCc---------ch---hhhhhcC-c----eecC
Confidence 45559999999999999999987643 43 688888641 11 0111100 0 1136
Q ss_pred HHHHhcccCCcEEEEecc----CCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 400 LLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~----~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
|.|+++. +|+++=.-. ..+.++++.++.|. +. ++.-.|.
T Consensus 194 l~e~l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk----~g-ilin~sr 236 (333)
T 2d0i_A 194 IDELLEK--SDIVILALPLTRDTYHIINEERVKKLE----GK-YLVNIGR 236 (333)
T ss_dssp HHHHHHH--CSEEEECCCCCTTTTTSBCHHHHHHTB----TC-EEEECSC
T ss_pred HHHHHhh--CCEEEEcCCCChHHHHHhCHHHHhhCC----CC-EEEECCC
Confidence 8898887 898773321 13678888899883 45 7777774
No 152
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=84.51 E-value=0.79 Score=44.24 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=25.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999988653 42 57888763
No 153
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.49 E-value=0.92 Score=43.91 Aligned_cols=93 Identities=10% Similarity=0.133 Sum_probs=57.0
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|+ |..|..+|..|.. .|. +++++|++- +.+. .+.... . ...++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~------~~~~----~~~~~g--~----~~~~~~~ 63 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP------EGRD----RLQGMG--I----PLTDGDG 63 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH------HHHH----HHHHTT--C----CCCCSSG
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH------HHHH----HHHhcC--C----CcCCHHH
Confidence 38999999 9999999998865 342 688887631 0111 111110 0 0124566
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
+++. +|++| ++..+.. .+++++.+.....+..||.-+|+..+
T Consensus 64 ~~~~--aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 64 WIDE--ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGGT--CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHHH
T ss_pred HhcC--CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCch
Confidence 7765 88877 3332333 68888887543445667777888654
No 154
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=84.46 E-value=2.3 Score=42.34 Aligned_cols=102 Identities=17% Similarity=0.216 Sum_probs=59.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccC-CcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG-DFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~-~~~~~~~~~~L~e 402 (533)
.+|.|+|+|..|..++..+... .|. ++++++|+. . +..+.|++... .. ....++.|
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~------~~~~~l~~~~~~~~---~~~~~~~e 192 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----K------ENAEKFADTVQGEV---RVCSSVQE 192 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----H------HHHHHHHHHSSSCC---EECSSHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----H------HHHHHHHHHhhCCe---EEeCCHHH
Confidence 7999999999999999888653 243 478888762 1 11122332210 01 12367999
Q ss_pred HhcccCCcEEEEeccC-CCCCCHHHHHHhhhcCCCCCeEEecCC--CCCcccCCHHHHhc
Q 009519 403 VVRKVKPHVLLGLSGV-GGVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAADAFK 459 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~-~g~Fteevv~~Ma~~~~erPIIFaLSN--Pt~~aE~tpe~A~~ 459 (533)
+++. +|++|=+... ..+|.+ +. ..+..+|+.+|. |.. .|+.+ ++.+
T Consensus 193 ~v~~--aDiVi~atp~~~~v~~~---~~----l~~g~~vi~~g~~~p~~-~el~~-~~~~ 241 (312)
T 2i99_A 193 AVAG--ADVIITVTLATEPILFG---EW----VKPGAHINAVGASRPDW-RELDD-ELMK 241 (312)
T ss_dssp HHTT--CSEEEECCCCSSCCBCG---GG----SCTTCEEEECCCCSTTC-CSBCH-HHHH
T ss_pred HHhc--CCEEEEEeCCCCcccCH---HH----cCCCcEEEeCCCCCCCc-eeccH-HHHh
Confidence 9987 8998844321 223333 12 235668888854 543 46654 4444
No 155
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=84.41 E-value=2.4 Score=43.91 Aligned_cols=187 Identities=19% Similarity=0.112 Sum_probs=107.2
Q ss_pred hhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcC
Q 009519 298 GTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARN 359 (533)
Q Consensus 298 GTaaV~LAgli~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~ 359 (533)
.+|=-+++-+++..|-. |. .-.+|...++.|+|.|..|..+|+.+..+ |+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~f-----G~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGF-----RA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTS-----CC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhC-----CC-------
Confidence 34445677777776621 21 12345569999999999999999987543 44
Q ss_pred eEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEe----ccCCCCCCHHHHHHhhhcCC
Q 009519 360 KFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEEVLKAMRESDS 435 (533)
Q Consensus 360 ~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~----S~~~g~Fteevv~~Ma~~~~ 435 (533)
+++.+|+.. +... ..... ....+|.|+++. .|+++=. ....+.|+++.++.|.
T Consensus 201 ~V~~~d~~~---------~~~~--~~~~g------~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---- 257 (365)
T 4hy3_A 201 RIRVFDPWL---------PRSM--LEENG------VEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---- 257 (365)
T ss_dssp EEEEECSSS---------CHHH--HHHTT------CEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC----
T ss_pred EEEEECCCC---------CHHH--HhhcC------eeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC----
Confidence 678777631 1110 11110 012479999988 8998832 2234789999999993
Q ss_pred CCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCC-CCcceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHH
Q 009519 436 VKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGS-PFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGM 514 (533)
Q Consensus 436 erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGS-Pf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M 514 (533)
+..|+.=.|.-..--|-.-.+|++ +|+.- | |- =|++-..+.+ ..--+..|+.+-|=+|-....+ -..|
T Consensus 258 ~gailIN~aRG~~vde~aL~~aL~--~g~i~-a-aLDV~~~EPl~~~--~pL~~~~nvilTPHia~~t~e~-----~~~~ 326 (365)
T 4hy3_A 258 RGAAFILLSRADVVDFDALMAAVS--SGHIV-A-ASDVYPEEPLPLD--HPVRSLKGFIRSAHRAGALDSA-----FKKM 326 (365)
T ss_dssp TTCEEEECSCGGGSCHHHHHHHHH--TTSSE-E-EESCCSSSSCCTT--CGGGTCTTEEECCSCSSCCHHH-----HHHH
T ss_pred CCcEEEECcCCchhCHHHHHHHHH--cCCce-E-EeeCCCCCCCCCC--ChhhcCCCEEECCccccCHHHH-----HHHH
Confidence 678888888754422333344544 56643 3 31 1111111101 1123567999999887533222 2456
Q ss_pred HHHHHHHHhcccCCCC
Q 009519 515 LQQAAEWYVCDNCNEP 530 (533)
Q Consensus 515 ~~aAA~alA~~v~~~~ 530 (533)
...+++-|......++
T Consensus 327 ~~~~~~ni~~~~~G~~ 342 (365)
T 4hy3_A 327 GDMVLEDMDLMDRGLP 342 (365)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 6666666666555444
No 156
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=84.24 E-value=1.8 Score=43.30 Aligned_cols=121 Identities=21% Similarity=0.245 Sum_probs=72.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||..|.++|..++.. |+- ..++|+|.+-= ..+. .++.. +..+ .. ....++ +
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~~-----~ev~L~Di~~~-~~g~a~dl~~----~~~~--~i---~~t~d~-~ 73 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GIA-----DRLVLLDLSEG-TKGATMDLEI----FNLP--NV---EISKDL-S 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECCC------CHHHHHH----HTCT--TE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CCC-----CEEEEEcCCcc-hHHHHHHHhh----hcCC--Ce---EEeCCH-H
Confidence 6899999999999999988643 432 57999998531 1111 01111 1111 11 112456 7
Q ss_pred HhcccCCcEEEEeccCC--CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--CcEEE
Q 009519 403 VVRKVKPHVLLGLSGVG--GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIVF 467 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~--g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Grai~ 467 (533)
++++ .|++|=..+.+ |- .-+++++.|.+ +++.-+|+-.|||.. +..+-+++.+. -.-+|
T Consensus 74 ~l~~--aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rvi 147 (303)
T 2i6t_A 74 ASAH--SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGH-YSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVI 147 (303)
T ss_dssp GGTT--CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEE
T ss_pred HHCC--CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHee
Confidence 7877 89988544332 21 23577778854 788999888999987 44555555321 23477
Q ss_pred ecCC
Q 009519 468 ASGS 471 (533)
Q Consensus 468 AtGS 471 (533)
++|.
T Consensus 148 G~gt 151 (303)
T 2i6t_A 148 GIGC 151 (303)
T ss_dssp ECTT
T ss_pred CCCC
Confidence 8863
No 157
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=84.22 E-value=0.79 Score=46.17 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=63.7
Q ss_pred ceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccC--CcCCccCCCCH
Q 009519 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG--DFMGLREGASL 400 (533)
Q Consensus 324 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~--~~~~~~~~~~L 400 (533)
.||+|.| +|..|..++..|.. .|+- ..++++|.+-- . .....+.+... .........++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~~-----~ev~l~Di~~~----~----~~~~dL~~~~~~~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPLV-----SVLHLYDVVNA----P----GVTADISHMDTGAVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTTE-----EEEEEEESSSH----H----HHHHHHHTSCSSCEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEeCCCc----H----hHHHHhhcccccceEEEEeCCCCH
Confidence 5899999 79999999887653 3431 36999996421 0 00001111100 00000012368
Q ss_pred HHHhcccCCcEEEEeccCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g-----------~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
.+++++ .|++|=+.+.+ | ..++++++.|.+ ++.+.+|+--|||..
T Consensus 71 ~~al~g--aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~-~~p~~~viv~SNPv~ 129 (326)
T 1smk_A 71 EAALTG--MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CCPRAIVNLISNPVN 129 (326)
T ss_dssp HHHHTT--CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HHHcCC--CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCchH
Confidence 899988 89988554433 3 246778888854 678889999999986
No 158
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=84.17 E-value=5.1 Score=40.45 Aligned_cols=198 Identities=16% Similarity=0.093 Sum_probs=112.0
Q ss_pred cCceeccCcc---hhHHHHHHHHHHHHHHh---------C------CCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHH
Q 009519 288 RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (533)
Q Consensus 288 ~~~~FnDDiQ---GTaaV~LAgli~Alr~~---------g------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 349 (533)
-+.|.|---. .+|=-+++.+++..|-. | ..-.+|...+|.|+|.|..|..+|+.+...
T Consensus 93 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~---- 168 (333)
T 1j4a_A 93 GFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF---- 168 (333)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 4777775333 34444788888887721 2 111345559999999999999999988753
Q ss_pred cCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEecc----CCCCCCHH
Q 009519 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEE 425 (533)
Q Consensus 350 ~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ftee 425 (533)
|+ +++.+|+.. .. ..+ .++. ...+|.|+++. .|+++=.-. ..+.++++
T Consensus 169 -G~-------~V~~~d~~~------~~--~~~-~~~~---------~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 169 -GA-------KVITYDIFR------NP--ELE-KKGY---------YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp -TC-------EEEEECSSC------CH--HHH-HTTC---------BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHH
T ss_pred -CC-------EEEEECCCc------ch--hHH-hhCe---------ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHH
Confidence 43 688888632 10 011 1211 11369999987 899874421 24789999
Q ss_pred HHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEec-----CCC--CcceecCCCeeee-----ccccccee
Q 009519 426 VLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFAS-----GSP--FENVDLGNGKIGH-----VNQANNMY 493 (533)
Q Consensus 426 vv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~At-----GSP--f~pv~~~~G~~~~-----p~Q~NN~~ 493 (533)
.++.|. +..++.-.|.-..--|-.-.+|.+ +|+.--|. .-| ||+=.-. ..... --+..|+.
T Consensus 221 ~l~~mk----~ga~lIn~arg~~vd~~aL~~aL~--~g~i~gA~LDV~~~EP~~l~~~~~~-~~~~~p~~~~L~~~~nvi 293 (333)
T 1j4a_A 221 SIAKMK----QDVVIVNVSRGPLVDTDAVIRGLD--SGKIFGYAMDVYEGEVGIFNEDWEG-KEFPDARLADLIARPNVL 293 (333)
T ss_dssp HHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCTTCTTTTTSBCTT-SCCSCHHHHHHHHCTTEE
T ss_pred HHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCceEEEEecCCCCCCcccccccc-ccCCccchhhHHhCCCEE
Confidence 999993 577888888754433333344444 45433231 112 2111000 00000 11356899
Q ss_pred echhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCC
Q 009519 494 LFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNE 529 (533)
Q Consensus 494 iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~ 529 (533)
+-|=++-....+ -+.|...+++.|.+....+
T Consensus 294 lTPHia~~t~~~-----~~~~~~~~~~nl~~~~~g~ 324 (333)
T 1j4a_A 294 VTPKTAFYTTHA-----VRNMVVKAFDNNLELVEGK 324 (333)
T ss_dssp ECSSCTTCBHHH-----HHHHHHHHHHHHHHHHTTC
T ss_pred ECCccccCHHHH-----HHHHHHHHHHHHHHHHcCC
Confidence 999887422211 2456666666666555444
No 159
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=84.09 E-value=1.2 Score=44.82 Aligned_cols=111 Identities=16% Similarity=0.155 Sum_probs=64.2
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc--Cc---cccCCCCCChhhhccccccCCcCCccCC
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GL---ITKERKNLDPAAAPFAKDPGDFMGLREG 397 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~--GL---i~~~r~~l~~~k~~~A~~~~~~~~~~~~ 397 (533)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ .. +.....+|.+.-.++..+ . ...
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~---i---~~~ 74 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAG---M---TAH 74 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEE---E---EEE
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCc---E---EEe
Confidence 69999998 9999998887764 243111112369999975 10 000000111100011111 0 123
Q ss_pred CCHHHHhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCC-CCCeEEecCCCCC
Q 009519 398 ASLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDS-VKPAIFAMSNPTM 448 (533)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~-erPIIFaLSNPt~ 448 (533)
.++.+++++ .|++|=+.+.+ |. .++++++.+.+ ++ .+.+|+-.|||..
T Consensus 75 ~~~~~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~~p~a~ii~~SNPv~ 137 (329)
T 1b8p_A 75 ADPMTAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDA-VASRNIKVLVVGNPAN 137 (329)
T ss_dssp SSHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH
T ss_pred cCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEEccCchH
Confidence 568999998 89888544433 31 35678888864 64 7767777899984
No 160
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=83.91 E-value=3.6 Score=42.15 Aligned_cols=200 Identities=14% Similarity=0.061 Sum_probs=114.8
Q ss_pred cCceeccC--cchhHHHHHHHHHHHHHHh---------C---C-------------CCCCCCCceEEEeCchhHHHHHHH
Q 009519 288 RFCMFNDD--IQGTAGVALAGLLGTVRAQ---------G---L-------------SLTDFADQKIVVVGAGSAGLGVLK 340 (533)
Q Consensus 288 ~~~~FnDD--iQGTaaV~LAgli~Alr~~---------g---~-------------~l~dl~~~riv~~GAGsAg~GiA~ 340 (533)
-++|.|-- -..+|=-+++-+++..|-. | + .-.+|...+|.|+|.|..|..+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 46666621 2344555677777776631 1 0 123455599999999999999999
Q ss_pred HHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEec----
Q 009519 341 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS---- 416 (533)
Q Consensus 341 ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S---- 416 (533)
.+... |+ +++.+|+.. .. ..+... +.....+|.|+++. .|+++=.-
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~----g~~~~~~l~ell~~--aDiV~l~~Plt~ 227 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGREN---------SK---ERARAD----GFAVAESKDALFEQ--SDVLSVHLRLND 227 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHH---------HH---HHHHHT----TCEECSSHHHHHHH--CSEEEECCCCST
T ss_pred HHHhC-----CC-------EEEEECCCC---------CH---HHHHhc----CceEeCCHHHHHhh--CCEEEEeccCcH
Confidence 88654 44 688888641 00 111110 00112479999988 89987431
Q ss_pred cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeech
Q 009519 417 GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFP 496 (533)
Q Consensus 417 ~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFP 496 (533)
...+.|+++.++.|. +..++.=.|+-..--|-.-.+|++ +|+.-.|.=-=|++-..+ ....--+..|+.+-|
T Consensus 228 ~t~~li~~~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~--~~~pL~~~~nvilTP 299 (352)
T 3gg9_A 228 ETRSIITVADLTRMK----PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPIL--QGHTLLRMENCICTP 299 (352)
T ss_dssp TTTTCBCHHHHTTSC----TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCC--SCCGGGGCTTEEECC
T ss_pred HHHHhhCHHHHhhCC----CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCC--CCChhhcCCCEEECC
Confidence 234789999999993 678999888755444555556665 454321110011111111 011123467999999
Q ss_pred hhhHHHHHhCCcccCHHHHHHHHHHHhcccCCCC
Q 009519 497 GIGLGTLLSGARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 497 GiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
=+|-..- .--+.|...+++-|.+....++
T Consensus 300 Hia~~t~-----e~~~~~~~~~~~ni~~~~~G~p 328 (352)
T 3gg9_A 300 HIGYVER-----ESYEMYFGIAFQNILDILQGNV 328 (352)
T ss_dssp SCTTCBH-----HHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCH-----HHHHHHHHHHHHHHHHHHcCCC
Confidence 8753211 1124566666776666555444
No 161
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=83.89 E-value=4 Score=40.93 Aligned_cols=186 Identities=21% Similarity=0.215 Sum_probs=106.9
Q ss_pred CceeccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCchhHHHHHHHHHHHHHH
Q 009519 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (533)
Q Consensus 289 ~~~FnDDi---QGTaaV~LAgli~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 347 (533)
+.+.|--- +.+|=-+++.+++..|-. |. .-.+|...+|.|+|.|..|..+|+.+...
T Consensus 89 i~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-- 166 (311)
T 2cuk_A 89 IRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF-- 166 (311)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred cEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC--
Confidence 66666432 233444678888776632 10 01245559999999999999999988653
Q ss_pred HHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEec----cCCCCCC
Q 009519 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 423 (533)
Q Consensus 348 ~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft 423 (533)
|+ +++.+|+.. .. .. +. ..+|.|+++. .|+++=.- ...+.++
T Consensus 167 ---G~-------~V~~~d~~~----~~--~~------~~----------~~~l~ell~~--aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 167 ---GM-------RVVYHARTP----KP--LP------YP----------FLSLEELLKE--ADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp ---TC-------EEEEECSSC----CS--SS------SC----------BCCHHHHHHH--CSEEEECCCCCTTTTTCBC
T ss_pred ---CC-------EEEEECCCC----cc--cc------cc----------cCCHHHHHhh--CCEEEEeCCCChHHHhhcC
Confidence 43 688888742 11 11 10 2468999987 89988541 1247888
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEe----cC-CCCcceecCCCeeeecccccceeechhh
Q 009519 424 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA----SG-SPFENVDLGNGKIGHVNQANNMYLFPGI 498 (533)
Q Consensus 424 eevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~A----tG-SPf~pv~~~~G~~~~p~Q~NN~~iFPGi 498 (533)
++.++.|. +..++.=.|.-..--|..-.+|.+ |+.--| .+ -|.++ . ..--+..|+.+-|=+
T Consensus 213 ~~~l~~mk----~ga~lin~srg~~vd~~aL~~aL~---g~i~ga~lDv~~~eP~~~-----~--~~L~~~~nviltPh~ 278 (311)
T 2cuk_A 213 RERLFAMK----RGAILLNTARGALVDTEALVEALR---GHLFGAGLDVTDPEPLPP-----G--HPLYALPNAVITPHI 278 (311)
T ss_dssp HHHHTTSC----TTCEEEECSCGGGBCHHHHHHHHT---TTSSEEEESSCSSSSCCT-----T--SGGGGCTTEEECCSC
T ss_pred HHHHhhCC----CCcEEEECCCCCccCHHHHHHHHh---CcCCEEEEeeCCCCCCCC-----C--ChhhhCCCEEECCcC
Confidence 88888883 678888888744322322334443 331111 11 12111 0 112246789999977
Q ss_pred hHHHHHhCCcccCHHHHHHHHHHHhcccCCC
Q 009519 499 GLGTLLSGARFITDGMLQQAAEWYVCDNCNE 529 (533)
Q Consensus 499 glG~l~~~a~~Itd~M~~aAA~alA~~v~~~ 529 (533)
+-....+ -..|...+++.|.+....+
T Consensus 279 ~~~t~~~-----~~~~~~~~~~nl~~~~~g~ 304 (311)
T 2cuk_A 279 GSAGRTT-----RERMAEVAVENLLAVLEGR 304 (311)
T ss_dssp TTCBHHH-----HHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHH-----HHHHHHHHHHHHHHHHcCC
Confidence 6422211 2455666666666555443
No 162
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=83.72 E-value=0.56 Score=47.90 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=29.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||+|+|+|..|..||+.|+.+++ ++|.++|.+
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gv-----------g~itlvD~d 69 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGV-----------KGLTMLDHE 69 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEECC
Confidence 899999999999999999998755 699999975
No 163
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=83.72 E-value=4.4 Score=40.84 Aligned_cols=221 Identities=14% Similarity=0.091 Sum_probs=128.7
Q ss_pred CCc-eeeeecCCCchHHH-HHH---HHhccCceec--cC--cchhHHHHHHHHHHHHHHh---------C----CCCCCC
Q 009519 264 PKA-IVQFEDFQMKWAFE-TLE---RYRKRFCMFN--DD--IQGTAGVALAGLLGTVRAQ---------G----LSLTDF 321 (533)
Q Consensus 264 P~~-~I~~EDf~~~~af~-iL~---ryr~~~~~Fn--DD--iQGTaaV~LAgli~Alr~~---------g----~~l~dl 321 (533)
|+. .|+.-=.+..|-.. +-. -.+..+++.| +- -+.+|=-+++.+++..|-. | .+..+|
T Consensus 58 ~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l 137 (315)
T 3pp8_A 58 RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTR 137 (315)
T ss_dssp CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCS
T ss_pred CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCc
Confidence 776 77776666665423 322 1223466665 22 1456667788888887641 1 122344
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHH
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~ 401 (533)
.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- ...... .+. ...+|.
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~~------~~~~~~-~~~----------~~~~l~ 188 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAW-----GF-------PLRCWSRSRK------SWPGVE-SYV----------GREELR 188 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEEESSCC------CCTTCE-EEE----------SHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEcCCch------hhhhhh-hhc----------ccCCHH
Confidence 559999999999999999988654 44 6888886421 111100 010 114699
Q ss_pred HHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCccee
Q 009519 402 EVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 477 (533)
Q Consensus 402 e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~ 477 (533)
|+++. .|+++=.- ...+.|+++.++.|. +..|+.=.|.-..--|-.-.+|++ +|+.--|.=-=|++-.
T Consensus 189 ell~~--aDiV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP 260 (315)
T 3pp8_A 189 AFLNQ--TRVLINLLPNTAQTVGIINSELLDQLP----DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEP 260 (315)
T ss_dssp HHHHT--CSEEEECCCCCGGGTTCBSHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSS
T ss_pred HHHhh--CCEEEEecCCchhhhhhccHHHHhhCC----CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCC
Confidence 99987 89987431 124789999999993 678888888755433433444544 5554333211121111
Q ss_pred cCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCCC
Q 009519 478 LGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 478 ~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
.+.. ..--+..|+.+-|=++-. +. .+.|...+++-|.+....++
T Consensus 261 l~~~--~pL~~~~nvilTPHia~~------t~-~~~~~~~~~~ni~~~~~G~~ 304 (315)
T 3pp8_A 261 LPQE--SPLWRHPRVAMTPHIAAV------TR-PAEAIDYISRTITQLEKGEP 304 (315)
T ss_dssp CCTT--CGGGGCTTEEECSSCSSC------CC-HHHHHHHHHHHHHHHHHTCC
T ss_pred CCCC--ChhhcCCCEEECCCCCcc------cH-HHHHHHHHHHHHHHHHcCCC
Confidence 1101 112356789999987632 22 25677777777766655444
No 164
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=83.46 E-value=7.2 Score=39.90 Aligned_cols=198 Identities=14% Similarity=0.136 Sum_probs=113.5
Q ss_pred CceeccCc---chhHHHHHHHHHHHHHH----------hCC-------CCCCCCCceEEEeCchhHHHHHHHHHHHHHHH
Q 009519 289 FCMFNDDI---QGTAGVALAGLLGTVRA----------QGL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (533)
Q Consensus 289 ~~~FnDDi---QGTaaV~LAgli~Alr~----------~g~-------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 348 (533)
+++.|--- +.+|=-+++-+++..|- .|. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 94 I~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~--- 170 (343)
T 2yq5_A 94 LLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM--- 170 (343)
T ss_dssp CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC---
Confidence 66666532 23455668888877762 221 12245559999999999999999988754
Q ss_pred HcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEecc----CCCCCCH
Q 009519 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (533)
Q Consensus 349 ~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Fte 424 (533)
|+ +++.+|+..- +.....+ ...+|.|+++. .|+++=.-- ..+.|++
T Consensus 171 --G~-------~V~~~d~~~~---------~~~~~~~----------~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 171 --GA-------KVIAYDVAYN---------PEFEPFL----------TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp --TC-------EEEEECSSCC---------GGGTTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCH
T ss_pred --CC-------EEEEECCChh---------hhhhccc----------cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhH
Confidence 44 6888887421 1000000 12479999988 899884422 2488999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCC--cceecCCC----ee-----eeccccccee
Q 009519 425 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPF--ENVDLGNG----KI-----GHVNQANNMY 493 (533)
Q Consensus 425 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf--~pv~~~~G----~~-----~~p~Q~NN~~ 493 (533)
+.++.|. +..++.=.|.-..--|-.-.+|++ +|+.-.|.=-=| +|..++.. +. ..--+..|+.
T Consensus 221 ~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvi 294 (343)
T 2yq5_A 221 KQLKEMK----KSAYLINCARGELVDTGALIKALQ--DGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVV 294 (343)
T ss_dssp HHHHHSC----TTCEEEECSCGGGBCHHHHHHHHH--HTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEE
T ss_pred HHHhhCC----CCcEEEECCCChhhhHHHHHHHHH--cCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEE
Confidence 9999993 678888888754433333344443 343211110011 11001000 00 0123567999
Q ss_pred echhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCCC
Q 009519 494 LFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 494 iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
+-|=+|-..- .--..|...+++-|.+....++
T Consensus 295 lTPHia~~t~-----ea~~~~~~~~~~ni~~~l~g~~ 326 (343)
T 2yq5_A 295 ITPHSAFYTE-----TSIRNMVQICLTDQLTIAKGGR 326 (343)
T ss_dssp ECSSCTTCBH-----HHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECCccccchH-----HHHHHHHHHHHHHHHHHHcCCC
Confidence 9998863222 2224666666776666555443
No 165
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=83.26 E-value=1.7 Score=43.89 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.+||..+..+ |. +++++|.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 6899999999999999998764 54 58888864
No 166
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=83.18 E-value=2.6 Score=43.99 Aligned_cols=195 Identities=16% Similarity=0.102 Sum_probs=105.8
Q ss_pred cCceeccCc---chhHHHHHHHHHHHHHHh--------------------CCCCCCCCCceEEEeCchhHHHHHHHHHHH
Q 009519 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ--------------------GLSLTDFADQKIVVVGAGSAGLGVLKMAVQ 344 (533)
Q Consensus 288 ~~~~FnDDi---QGTaaV~LAgli~Alr~~--------------------g~~l~dl~~~riv~~GAGsAg~GiA~ll~~ 344 (533)
-+.|.|--- +.+|=-+++-+|+..|-. +..|.. .++.|+|.|..|..+|+.+..
T Consensus 136 gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g---ktvGIIGlG~IG~~vA~~l~a 212 (393)
T 2nac_A 136 NVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEA---MHVGTVAAGRIGLAVLRRLAP 212 (393)
T ss_dssp TCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTT---CEEEEECCSHHHHHHHHHHGG
T ss_pred CEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCC---CEEEEEeECHHHHHHHHHHHh
Confidence 366666221 234445677777776532 334444 999999999999999998865
Q ss_pred HHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEec----cCCC
Q 009519 345 AAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGG 420 (533)
Q Consensus 345 ~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g 420 (533)
. |+ +++.+|+... .. ..++... .....+|.|+++. .|+++=.- ...+
T Consensus 213 ~-----G~-------~V~~~d~~~~--------~~---~~~~~~G----~~~~~~l~ell~~--aDvV~l~~Plt~~t~~ 263 (393)
T 2nac_A 213 F-----DV-------HLHYTDRHRL--------PE---SVEKELN----LTWHATREDMYPV--CDVVTLNCPLHPETEH 263 (393)
T ss_dssp G-----TC-------EEEEECSSCC--------CH---HHHHHHT----CEECSSHHHHGGG--CSEEEECSCCCTTTTT
T ss_pred C-----CC-------EEEEEcCCcc--------ch---hhHhhcC----ceecCCHHHHHhc--CCEEEEecCCchHHHH
Confidence 3 43 6887876311 11 1111100 0012469999987 89887442 2247
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhhH
Q 009519 421 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 500 (533)
Q Consensus 421 ~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 500 (533)
+|+++.++.|. +..++.=.|.-..--|-.-.+|++ +|+.--|.--=|.+-..+... .--+..|+.+-|=++-
T Consensus 264 li~~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~EP~~~~~--pL~~~~nvilTPHia~ 335 (393)
T 2nac_A 264 MINDETLKLFK----RGAYIVNTARGKLCDRDAVARALE--SGRLAGYAGDVWFPQPAPKDH--PWRTMPYNGMTPHISG 335 (393)
T ss_dssp CBSHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSSSCCTTC--GGGTSTTBCCCCSCTT
T ss_pred HhhHHHHhhCC----CCCEEEECCCchHhhHHHHHHHHH--cCCeeEEEEEecCCCCCCCCC--hhHcCCCEEECCCCCc
Confidence 89999999993 577888888643322222334443 565332221111100000011 1124668999998764
Q ss_pred HHHHhCCcccCHHHHHHHHHHHhcccC
Q 009519 501 GTLLSGARFITDGMLQQAAEWYVCDNC 527 (533)
Q Consensus 501 G~l~~~a~~Itd~M~~aAA~alA~~v~ 527 (533)
....+ ...|...+++-|.+...
T Consensus 336 ~T~e~-----~~~~~~~~~~nl~~~~~ 357 (393)
T 2nac_A 336 TTLTA-----QARYAAGTREILECFFE 357 (393)
T ss_dssp CSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CcHHH-----HHHHHHHHHHHHHHHHc
Confidence 33222 12344445555544433
No 167
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=83.18 E-value=0.97 Score=45.30 Aligned_cols=127 Identities=18% Similarity=0.231 Sum_probs=72.1
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||.|+|||+.|..+|-+|+. .++- ..++|+|.+-=-.++ ..+|.+. .+|.++.. . ...+ .++
T Consensus 2 KI~IiGaG~vG~~~a~~l~~-----~~~~-----~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~-v----~~~~-~~a 64 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALAL-----LGVA-----REVVLVDLDRKLAQAHAEDILHA-TPFAHPVW-V----WAGS-YGD 64 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHHTT-GGGSCCCE-E----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHHHh-HhhcCCeE-E----EECC-HHH
Confidence 89999999999998887654 2332 489999985200000 0012111 12221110 0 0123 667
Q ss_pred hcccCCcEEEEec---cCCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCcEEE
Q 009519 404 VRKVKPHVLLGLS---GVGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIVF 467 (533)
Q Consensus 404 V~~vkptvLIG~S---~~~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Grai~ 467 (533)
+++ +|++|=+. ..+|- .-+++++.|.+ +++.-+|+-.|||.. .+.+-+++.+ .-.-+|
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~s~~p~~rvi 138 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLE-AAPEAVLLVATNPVD---VMTQVAYALSGLPPGRVV 138 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHHHTCCGGGEE
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHHcCCCHHHEE
Confidence 877 89988433 33342 22456666644 788999999999986 4445555543 112467
Q ss_pred ecCCCCc
Q 009519 468 ASGSPFE 474 (533)
Q Consensus 468 AtGSPf~ 474 (533)
.+|.=.+
T Consensus 139 G~gt~LD 145 (310)
T 2xxj_A 139 GSGTILD 145 (310)
T ss_dssp ECTTHHH
T ss_pred ecCcchh
Confidence 7764433
No 168
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=83.17 E-value=6.4 Score=40.25 Aligned_cols=194 Identities=17% Similarity=0.161 Sum_probs=101.4
Q ss_pred CceeccCc---chhHHHHHHHHHHHHHHh---------C----C-CC---CCCCCceEEEeCchhHHHHHHHHHHHHHHH
Q 009519 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------G----L-SL---TDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (533)
Q Consensus 289 ~~~FnDDi---QGTaaV~LAgli~Alr~~---------g----~-~l---~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 348 (533)
|+|.|--- ..+|=-+++-+++..|-. | . .. .+|...+|.|+|.|..|..+|+.+...
T Consensus 117 I~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~--- 193 (340)
T 4dgs_A 117 IDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAF--- 193 (340)
T ss_dssp CEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred EEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHC---
Confidence 55555321 234555677777776531 1 0 11 345559999999999999999988643
Q ss_pred HcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEec----cCCCCCCH
Q 009519 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNE 424 (533)
Q Consensus 349 ~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Fte 424 (533)
|+ +++.+|+.. .. .. .+ ....+|.|+++. .|+++=.- ...+.+++
T Consensus 194 --G~-------~V~~~dr~~----~~-~~-----~~----------~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~ 242 (340)
T 4dgs_A 194 --GM-------SVRYWNRST----LS-GV-----DW----------IAHQSPVDLARD--SDVLAVCVAASAATQNIVDA 242 (340)
T ss_dssp --TC-------EEEEECSSC----CT-TS-----CC----------EECSSHHHHHHT--CSEEEECC----------CH
T ss_pred --CC-------EEEEEcCCc----cc-cc-----Cc----------eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhH
Confidence 44 688888632 11 00 01 012579999988 89987432 12478999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhhHHHHH
Q 009519 425 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLL 504 (533)
Q Consensus 425 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~ 504 (533)
+.++.|. +..++.=.|.-..--|-.-.+|++ +|+.-.|.=-=|++-..++ ..--+..|+.+-|=+|-....
T Consensus 243 ~~l~~mk----~gailIN~aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~~---~~L~~~~nvilTPHia~~t~e 313 (340)
T 4dgs_A 243 SLLQALG----PEGIVVNVARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAIR---SEFHTTPNTVLMPHQGSATVE 313 (340)
T ss_dssp HHHHHTT----TTCEEEECSCC----------------CCSSEEEESCCSSSSSCC---SHHHHSSSEEECSSCSSCCHH
T ss_pred HHHhcCC----CCCEEEECCCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCCc---cchhhCCCEEEcCcCCcCCHH
Confidence 9999994 577888888755533554555554 4543222111111111110 122356788999987643322
Q ss_pred hCCcccCHHHHHHHHHHHhcccCCCC
Q 009519 505 SGARFITDGMLQQAAEWYVCDNCNEP 530 (533)
Q Consensus 505 ~~a~~Itd~M~~aAA~alA~~v~~~~ 530 (533)
+ -+.|...+++.|.+....++
T Consensus 314 ~-----~~~~~~~~~~nl~~~~~g~~ 334 (340)
T 4dgs_A 314 T-----RMAMGKLVLANLAAHFAGEK 334 (340)
T ss_dssp H-----HHHHHHHHHHHHHHHHTTSC
T ss_pred H-----HHHHHHHHHHHHHHHHcCCC
Confidence 2 24566666666666555444
No 169
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=83.01 E-value=1.4 Score=43.18 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=52.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|... |. +++++|++. + .+.. +++..- ....++.|+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~~----~--~~~~----~~~~g~-----~~~~~~~~~ 83 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRTA----E--KCDL----FIQEGA-----RLGRTPAEV 83 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSG----G--GGHH----HHHTTC-----EECSCHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCCH----H--HHHH----HHHcCC-----EEcCCHHHH
Confidence 6899999999999999988653 43 578887631 1 1111 111100 112457777
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhh---hcCCCCCeEEecCCCC
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMR---ESDSVKPAIFAMSNPT 447 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma---~~~~erPIIFaLSNPt 447 (533)
++. +|++|= +.....-.++++.... +...+..+|+-+||-.
T Consensus 84 ~~~--~DvVi~-av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 84 VST--CDITFA-CVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp HHH--CSEEEE-CCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCC
T ss_pred Hhc--CCEEEE-eCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCC
Confidence 776 777663 2211233445554321 2234556777777744
No 170
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=82.94 E-value=5.7 Score=40.33 Aligned_cols=162 Identities=15% Similarity=0.152 Sum_probs=99.6
Q ss_pred hCCCc-eeeeecCCCchHHHHHHHH-hccCceecc-Cc--chhHHHHHHHHHHHHHH-------------------hCCC
Q 009519 262 RWPKA-IVQFEDFQMKWAFETLERY-RKRFCMFND-DI--QGTAGVALAGLLGTVRA-------------------QGLS 317 (533)
Q Consensus 262 ~~P~~-~I~~EDf~~~~af~iL~ry-r~~~~~FnD-Di--QGTaaV~LAgli~Alr~-------------------~g~~ 317 (533)
..|+. .|+.--.+..|- .+ +.. +.-+++.|= +. ..+|=-+++-+++..|- .+..
T Consensus 61 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 138 (334)
T 2pi1_A 61 KMPRLKLIHTRSVGFDHI-DL-DYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARE 138 (334)
T ss_dssp TCTTCCEEEESSSCCTTB-CH-HHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCC
T ss_pred hCCCCeEEEECCcccccc-CH-HHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCcccee
Confidence 35555 666655555442 22 222 234666664 22 23455678888887762 1333
Q ss_pred CCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCC
Q 009519 318 LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREG 397 (533)
Q Consensus 318 l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~ 397 (533)
| .+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .+... ... ...
T Consensus 139 l---~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~~~---~~g------~~~ 185 (334)
T 2pi1_A 139 L---NRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVVK---------REDLK---EKG------CVY 185 (334)
T ss_dssp G---GGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHHHH---HTT------CEE
T ss_pred c---cCceEEEECcCHHHHHHHHHHHHC-----cC-------EEEEECCCc---------chhhH---hcC------cee
Confidence 4 449999999999999999998754 43 688888642 11110 100 012
Q ss_pred CCHHHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEE
Q 009519 398 ASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 466 (533)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai 466 (533)
.+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.=.|.-..--|-.-.+|++ +|+.-
T Consensus 186 ~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~ 250 (334)
T 2pi1_A 186 TSLDELLKE--SDVISLHVPYTKETHHMINEERISLMK----DGVYLINTARGKVVDTDALYRAYQ--RGKFS 250 (334)
T ss_dssp CCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTCEE
T ss_pred cCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 459999988 89987431 234789999999993 677888888755433444445544 56544
No 171
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.94 E-value=0.76 Score=43.92 Aligned_cols=30 Identities=13% Similarity=0.296 Sum_probs=23.9
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
||.|+|+|..|..+|..|.. |. +++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988753 32 57778763
No 172
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=82.86 E-value=1.5 Score=42.99 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999988753 43 57778763
No 173
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=82.80 E-value=0.6 Score=46.79 Aligned_cols=126 Identities=17% Similarity=0.286 Sum_probs=70.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||..|.++|..+... |+- ..|+++|.+--..+.. .++.+. .++... ++ .-..+..+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~~-----~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~--~~---~i~~~~~~ 70 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GIA-----DEIVLIDANESKAIGDAMDFNHG-KVFAPK--PV---DIWHGDYD 70 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-TTSSSS--CC---EEEECCGG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CCC-----CEEEEEeCCcchHHHHHhhHHHH-hhhcCC--Ce---EEEcCcHH
Confidence 5999999999999999766542 432 4799999852111100 011111 111110 00 00112356
Q ss_pred HhcccCCcEEEEeccCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--CcEE
Q 009519 403 VVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g-----------~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Grai 466 (533)
++++ +|++|=+.+.+ | ...+++++.|.+ +++.-++|-.|||.. ...+-+++.+. -.-+
T Consensus 71 al~~--aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~~iv~tNPv~---~~~~~~~~~s~~p~~rv 144 (316)
T 1ldn_A 71 DCRD--ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMA-SGFQGLFLVATNPVD---ILTYATWKFSGLPHERV 144 (316)
T ss_dssp GTTT--CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH---HHHHHHHHHHTCCGGGE
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHH-HCCCCEEEEeCCchH---HHHHHHHHHhCCCHHHE
Confidence 7777 89987443332 2 234567777754 677888888999986 34444555321 1246
Q ss_pred EecCC
Q 009519 467 FASGS 471 (533)
Q Consensus 467 ~AtGS 471 (533)
|.+|.
T Consensus 145 iG~gt 149 (316)
T 1ldn_A 145 IGSGT 149 (316)
T ss_dssp EECTT
T ss_pred Eeccc
Confidence 66654
No 174
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.80 E-value=0.64 Score=45.62 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999998764 43 67788864
No 175
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=82.67 E-value=6.4 Score=39.79 Aligned_cols=140 Identities=17% Similarity=0.176 Sum_probs=86.6
Q ss_pred cCceeccCcch---hHHHHHHHHHHHHHHh----------------CCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHH
Q 009519 288 RFCMFNDDIQG---TAGVALAGLLGTVRAQ----------------GLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (533)
Q Consensus 288 ~~~~FnDDiQG---TaaV~LAgli~Alr~~----------------g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 348 (533)
-+.|.|=--.. +|=-+++.+++..|-. +..-.+|...+|.|+|.|..|..+|+.+...
T Consensus 91 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 167 (333)
T 1dxy_A 91 GIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF--- 167 (333)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC---
Confidence 47777643333 3444688888776511 1111344559999999999999999988754
Q ss_pred HcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEecc----CCCCCCH
Q 009519 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (533)
Q Consensus 349 ~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Fte 424 (533)
|+ +++.+|+.. .. ... .++ ...+|.|+++. .|+++=.-- ..+.|++
T Consensus 168 --G~-------~V~~~d~~~----~~-~~~----~~~----------~~~~l~ell~~--aDvV~~~~P~~~~t~~li~~ 217 (333)
T 1dxy_A 168 --GA-------KVIAYDPYP----MK-GDH----PDF----------DYVSLEDLFKQ--SDVIDLHVPGIEQNTHIINE 217 (333)
T ss_dssp --TC-------EEEEECSSC----CS-SCC----TTC----------EECCHHHHHHH--CSEEEECCCCCGGGTTSBCH
T ss_pred --CC-------EEEEECCCc----ch-hhH----hcc----------ccCCHHHHHhc--CCEEEEcCCCchhHHHHhCH
Confidence 43 688888742 11 111 111 12368999987 899884421 2478999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEE
Q 009519 425 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 466 (533)
Q Consensus 425 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai 466 (533)
+.++.|. +..++.=.|.-..--|-.-.+|.+ +|+.-
T Consensus 218 ~~l~~mk----~ga~lIn~srg~~vd~~aL~~aL~--~g~i~ 253 (333)
T 1dxy_A 218 AAFNLMK----PGAIVINTARPNLIDTQAMLSNLK--SGKLA 253 (333)
T ss_dssp HHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTSEE
T ss_pred HHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCcc
Confidence 9999993 577888888755432333334443 55533
No 176
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=82.58 E-value=1.1 Score=44.69 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=27.4
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..||||+|+|.||+..|..|.+. |-+ -+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 36999999999999999998654 221 268888875
No 177
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=82.54 E-value=4.5 Score=41.09 Aligned_cols=186 Identities=15% Similarity=0.208 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHHHh---------C----CCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 009519 299 TAGVALAGLLGTVRAQ---------G----LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (533)
Q Consensus 299 TaaV~LAgli~Alr~~---------g----~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD 365 (533)
+|=-+++.+++..|-. | ....+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3444677777766521 1 122344459999999999999999998654 44 688888
Q ss_pred ccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEE
Q 009519 366 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIF 441 (533)
Q Consensus 366 ~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIF 441 (533)
+.. . .... +... ....+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.
T Consensus 171 r~~---~---~~~~----~~~~-------~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk----~gailI 227 (324)
T 3hg7_A 171 RSG---R---ERAG----FDQV-------YQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK----PGAILF 227 (324)
T ss_dssp SSC---C---CCTT----CSEE-------ECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC----TTCEEE
T ss_pred CCh---H---Hhhh----hhcc-------cccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC----CCcEEE
Confidence 753 1 1111 1110 013569999988 89987431 224788999888883 678888
Q ss_pred ecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHH
Q 009519 442 AMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEW 521 (533)
Q Consensus 442 aLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~a 521 (533)
=.|.-..--|-.-.+|++ +|+.-.|.=-=|++-..+.. ..--+..|+.+-|=++-. +. ...|...+++-
T Consensus 228 N~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~--~pL~~~~nvilTPHia~~------t~-~~~~~~~~~~n 296 (324)
T 3hg7_A 228 NVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD--SPLWGQPNLIITPHNSAY------SF-PDDVAQIFVRN 296 (324)
T ss_dssp ECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT--CTTTTCTTEEECCSCSSC------CC-HHHHHHHHHHH
T ss_pred ECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC--ChhhcCCCEEEeCCCccc------cH-HHHHHHHHHHH
Confidence 888755433433344544 45432121000110001000 111246789999987632 22 35677777777
Q ss_pred HhcccCCCC
Q 009519 522 YVCDNCNEP 530 (533)
Q Consensus 522 lA~~v~~~~ 530 (533)
|......++
T Consensus 297 l~~~~~G~~ 305 (324)
T 3hg7_A 297 YIRFIDGQP 305 (324)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 776665554
No 178
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=82.49 E-value=2 Score=43.76 Aligned_cols=126 Identities=20% Similarity=0.284 Sum_probs=74.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||..|..+|..|+.. |+- ..+.++|.+-=..++- .+|.+. .+|..+.. ...+..+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~------i~~~~~~ 72 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHTT-GGGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHhhHhhh-hhhcCCcE------EEECcHH
Confidence 6999999999999999888764 432 4799999731100100 012221 12221110 0122356
Q ss_pred HhcccCCcEEEEeccCC---C-----CC------CHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--CcEE
Q 009519 403 VVRKVKPHVLLGLSGVG---G-----VF------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g-----~F------teevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Grai 466 (533)
++++ +|++|=+.+.+ | +| -+++++.|.+ ++++.+|+-.|||.. +..+-+++.+. -+-+
T Consensus 73 a~~~--aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvtNPvd---i~t~~~~k~~g~p~~rv 146 (326)
T 3vku_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD---ILTYATWKLSGFPKNRV 146 (326)
T ss_dssp GGTT--CSEEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGE
T ss_pred HhcC--CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEccCchH---HHHHHHHHhcCCCHHHe
Confidence 6777 88877443322 2 22 3677888864 899999999999985 55555666541 1356
Q ss_pred EecCCC
Q 009519 467 FASGSP 472 (533)
Q Consensus 467 ~AtGSP 472 (533)
|++|.-
T Consensus 147 iG~gt~ 152 (326)
T 3vku_A 147 VGSGTS 152 (326)
T ss_dssp EECTTH
T ss_pred eeeccc
Confidence 777643
No 179
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=82.43 E-value=0.52 Score=47.05 Aligned_cols=124 Identities=18% Similarity=0.152 Sum_probs=69.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccc----cCCcCCccCCCC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD----PGDFMGLREGAS 399 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~----~~~~~~~~~~~~ 399 (533)
.||.|+|||..|.++|..+.. .|+ + .++++|.+- ++ +......+.+. ..... .....+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~----~~--~~g~~~dl~~~~~~~~~~~~-i~~t~d 64 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVE----GV--PQGKALDLYEASPIEGFDVR-VTGTNN 64 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSS----SH--HHHHHHHHHTTHHHHTCCCC-EEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCc----cH--HHHHHHhHHHhHhhcCCCeE-EEECCC
Confidence 589999999999999997754 343 1 399999741 11 11111111110 00000 011245
Q ss_pred HHHHhcccCCcEEEEeccCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--C
Q 009519 400 LLEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--E 463 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~---g-----------~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--G 463 (533)
+ +++++ .|++|=+.+.| | ..-+++.+.+.+ ++++-+|+--|||.. ...+-+++.+. -
T Consensus 65 ~-~a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNPv~---~~t~~~~~~~~~~~ 137 (309)
T 1ur5_A 65 Y-ADTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAP-LSPNAVIIMVNNPLD---AMTYLAAEVSGFPK 137 (309)
T ss_dssp G-GGGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGG-GCTTCEEEECCSSHH---HHHHHHHHHHCCCG
T ss_pred H-HHHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEcCCchH---HHHHHHHHHcCCCH
Confidence 6 77877 89987444333 3 122467777754 678888877899987 23444545321 1
Q ss_pred cEEEecCCC
Q 009519 464 NIVFASGSP 472 (533)
Q Consensus 464 rai~AtGSP 472 (533)
.-+|++|.-
T Consensus 138 ~rviG~gt~ 146 (309)
T 1ur5_A 138 ERVIGQAGV 146 (309)
T ss_dssp GGEEECCHH
T ss_pred HHEEECCcc
Confidence 247777633
No 180
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=82.25 E-value=0.93 Score=46.48 Aligned_cols=122 Identities=18% Similarity=0.171 Sum_probs=67.8
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
+.||+|+|||.+|-.+|+.|.+. .++.++|++ .++ +......+....-+. .+..+|.+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~--a~~la~~~~~~~~d~---~~~~~l~~ 73 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN--LEKVKEFATPLKVDA---SNFDKLVE 73 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH--HHHHTTTSEEEECCT---TCHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH--HHHHHhhCCeEEEec---CCHHHHHH
Confidence 37999999999999999887642 268888873 111 111111111000000 12346889
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcce
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV 476 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv 476 (533)
++++ +|++|-+. |..+..+++++-.+ ..-.++-+|.-.+.++.--++|.+ .|. .+..|+-|+|-
T Consensus 74 ll~~--~DvVIn~~--P~~~~~~v~~a~l~---~G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 74 VMKE--FELVIGAL--PGFLGFKSIKAAIK---SKVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HHTT--CSCEEECC--CHHHHHHHHHHHHH---TTCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HHhC--CCEEEECC--ChhhhHHHHHHHHH---hCCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 9986 89998763 44456677665433 333466688633322223345544 454 33456556664
No 181
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=82.25 E-value=2.5 Score=44.46 Aligned_cols=81 Identities=16% Similarity=0.304 Sum_probs=52.1
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
-|++|+|+ |-+|.|-++.+... |.. ..++..+|.+= ..+ .. .+ +
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~-------------g~---------~~-~ 259 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSR-------------GG---------PF-D 259 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTT-------------CS---------CC-T
T ss_pred CeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---ccc-------------CC---------ch-h
Confidence 68999999 99999999988765 321 01566666531 000 00 01 1
Q ss_pred HhcccCCcEEEEeccC----CCCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 403 VVRKVKPHVLLGLSGV----GGVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~----~g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
.+.. .|++||+--. |-++|+|+++.|. .+--+|.=+|
T Consensus 260 ~i~~--aDivIn~vlig~~aP~Lvt~e~v~~m~---k~gsVIVDVA 300 (394)
T 2qrj_A 260 EIPQ--ADIFINCIYLSKPIAPFTNMEKLNNPN---RRLRTVVDVS 300 (394)
T ss_dssp HHHH--SSEEEECCCCCSSCCCSCCHHHHCCTT---CCCCEEEETT
T ss_pred hHhh--CCEEEECcCcCCCCCcccCHHHHhcCc---CCCeEEEEEe
Confidence 2444 7999988654 6789999999992 2445555454
No 182
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=82.08 E-value=0.58 Score=46.91 Aligned_cols=120 Identities=18% Similarity=0.320 Sum_probs=69.9
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcccc------ccCCcCCccCCC
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK------DPGDFMGLREGA 398 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~------~~~~~~~~~~~~ 398 (533)
||.|+|||+.|.++|-.++.. |+ ..++|+|.+ .++ +......+.+ ..... ....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~--~~g~~~dl~~~~~~~~~~~~i---~~t~ 60 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGK--PQGEALDLAHAAAELGVDIRI---SGSN 60 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTH--HHHHHHHHHHHHHHHTCCCCE---EEES
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhh--HHHHHHHHHHhhhhcCCCeEE---EECC
Confidence 689999999999999776542 54 269999985 111 1111111111 11011 1113
Q ss_pred CHHHHhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--
Q 009519 399 SLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG-- 462 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~-- 462 (533)
+. +++++ +|++|=..+.+ |- .-+++++.|.+ +++..+|+-.|||.. ...+-+++.+.
T Consensus 61 d~-~a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~~~~p 133 (308)
T 2d4a_B 61 SY-EDMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKA-YAKDAIVVITTNPVD---AMTYVMYKKTGFP 133 (308)
T ss_dssp CG-GGGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHHHCCC
T ss_pred CH-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCchH---HHHHHHHHhcCCC
Confidence 44 67877 89988554433 31 24577777754 678887777899986 33444555321
Q ss_pred CcEEEecCC
Q 009519 463 ENIVFASGS 471 (533)
Q Consensus 463 Grai~AtGS 471 (533)
-.-+|++|.
T Consensus 134 ~~rviG~gt 142 (308)
T 2d4a_B 134 RERVIGFSG 142 (308)
T ss_dssp GGGEEECCH
T ss_pred hhhEEEecc
Confidence 124777763
No 183
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.03 E-value=1.7 Score=41.60 Aligned_cols=98 Identities=20% Similarity=0.186 Sum_probs=58.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. .+...++...... ....++.++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-----------~~~~~~~~~g~~~--~~~~~~~~~ 58 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-----------ESISKAVDLGIID--EGTTSIAKV 58 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-----------HHHHHHHHTTSCS--EEESCGGGG
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-----------HHHHHHHHCCCcc--cccCCHHHH
Confidence 479999999999999998865 3432 3688887631 1111111100000 012357777
Q ss_pred hc-ccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 404 VR-KVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 404 V~-~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++ . +|++| ++. +.-.++++++.+.....+..||.-+||-..
T Consensus 59 ~~~~--aDvVi-lav-p~~~~~~v~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 59 EDFS--PDFVM-LSS-PVRTFREIAKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp GGTC--CSEEE-ECS-CHHHHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred hcCC--CCEEE-EcC-CHHHHHHHHHHHHhhCCCCcEEEECCCCcH
Confidence 77 5 88877 443 333566777776543456667777887543
No 184
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=82.00 E-value=0.76 Score=45.14 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-||+|+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 589999999999999988865 465 56677653
No 185
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=81.80 E-value=5.3 Score=40.51 Aligned_cols=220 Identities=13% Similarity=0.142 Sum_probs=124.8
Q ss_pred HhCCCc-eeeeecCCCchHHHHHHHHh-ccCceeccCc---chhHHHHHHHHHHHHHHhC--------------C-CCCC
Q 009519 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQG--------------L-SLTD 320 (533)
Q Consensus 261 ~~~P~~-~I~~EDf~~~~af~iL~ryr-~~~~~FnDDi---QGTaaV~LAgli~Alr~~g--------------~-~l~d 320 (533)
...|+. .|+.-=.+..|- . ++..+ .-+++.|--- +.+|=-+++.+++..|-.. . .-.+
T Consensus 57 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~ 134 (324)
T 3evt_A 57 RPTNQLKFVQVISAGVDYL-P-LKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTST 134 (324)
T ss_dssp STTCCCCEEECSSSCCTTS-C-HHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCC
T ss_pred hhCCCceEEEECCcccccc-C-HHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCcc
Confidence 345765 666655555542 2 23333 3477877653 2344456777777765310 0 1234
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCH
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- ........+ ...+|
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~------~~~~~~~~~-----------~~~~l 185 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASAL-----GM-------HVIGVNTTGH------PADHFHETV-----------AFTAT 185 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSCC------CCTTCSEEE-----------EGGGC
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhC-----CC-------EEEEECCCcc------hhHhHhhcc-----------ccCCH
Confidence 4459999999999999999988754 44 6888887421 111110001 12468
Q ss_pred HHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcce
Q 009519 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV 476 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv 476 (533)
.|+++. .|+++=.- ...+.|+++.++.|. +..++.=.|.-..--|-.-.+|++ +|+.-.|.=-=|++-
T Consensus 186 ~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~E 257 (324)
T 3evt_A 186 ADALAT--ANFIVNALPLTPTTHHLFSTELFQQTK----QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPE 257 (324)
T ss_dssp HHHHHH--CSEEEECCCCCGGGTTCBSHHHHHTCC----SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSS
T ss_pred HHHHhh--CCEEEEcCCCchHHHHhcCHHHHhcCC----CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCC
Confidence 899988 89987431 225889999999993 678888888755433444444544 455322210111111
Q ss_pred ecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhccc
Q 009519 477 DLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDN 526 (533)
Q Consensus 477 ~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v 526 (533)
..+ ....--+..|+.+-|=++-. ...-.+.|...+++-|.+..
T Consensus 258 Pl~--~~~pL~~~~nvilTPHia~~-----t~~~~~~~~~~~~~nl~~~l 300 (324)
T 3evt_A 258 PLP--TDHPLWQRDDVLITPHISGQ-----IAHFRATVFPIFAANFAQFV 300 (324)
T ss_dssp SCC--TTCGGGGCSSEEECCSCTTC-----CCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--CCChhhcCCCEEEcCccccC-----hHHHHHHHHHHHHHHHHHHH
Confidence 011 00112346789999987632 22234667777777666554
No 186
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=81.57 E-value=0.61 Score=46.44 Aligned_cols=103 Identities=21% Similarity=0.253 Sum_probs=58.9
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccc----cCCcCCccCCCCH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD----PGDFMGLREGASL 400 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~----~~~~~~~~~~~~L 400 (533)
||.|+|||+.|.++|..+... ++ -.+++++|.+- ++ +......+.+. ..... .....++
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~--~~~~~~~l~~~~~~~~~~~~-i~~t~d~ 64 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GI--PQGKALDMYESGPVGLFDTK-VTGSNDY 64 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SH--HHHHHHHHHTTHHHHTCCCE-EEEESCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hH--HHHHHHhHHhhhhcccCCcE-EEECCCH
Confidence 799999999999999887652 21 14799999852 11 11111011110 00000 0112445
Q ss_pred HHHhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
.+ ++. +|++|=+-..+ |- +-+++++.|++ +++..+|+-.|||..
T Consensus 65 ~~-l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~viv~tNP~~ 122 (310)
T 1guz_A 65 AD-TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMK-HSKNPIIIVVSNPLD 122 (310)
T ss_dssp GG-GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCSSCEEEECCSSHH
T ss_pred HH-HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEEcCchH
Confidence 55 766 88877443222 32 11566677754 678888888999986
No 187
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.55 E-value=1.6 Score=41.62 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=25.0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
||.|+|+|..|..+|..|... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988653 42 68888763
No 188
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=81.39 E-value=6.4 Score=39.95 Aligned_cols=163 Identities=14% Similarity=0.117 Sum_probs=88.1
Q ss_pred CCCCceEEEeCchhHHHHHHHHHH-HHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCC
Q 009519 320 DFADQKIVVVGAGSAGLGVLKMAV-QAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~-~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~ 398 (533)
+|...+|.|+|.|..|..+|+.+. .. |+ +|+.+|+..- .....+ .+ .- ....
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~-----G~-------~V~~~d~~~~------~~~~~~-~~---g~-----~~~~ 212 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGL-----GM-------KLVYYDVAPA------DAETEK-AL---GA-----ERVD 212 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEECSSCC------CHHHHH-HH---TC-----EECS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhc-----CC-------EEEEECCCCc------chhhHh-hc---Cc-----EEeC
Confidence 344499999999999999999886 43 43 6888886421 111111 00 00 0113
Q ss_pred CHHHHhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCc
Q 009519 399 SLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE 474 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~ 474 (533)
+|.|+++. .|+++=.- ...+.++++.++.|. +..||.-.|.-..--|-.-.+|++ +|+ |.+.|..+-
T Consensus 213 ~l~ell~~--aDvVil~vp~~~~t~~li~~~~l~~mk----~gailin~srg~~vd~~aL~~aL~--~~~-i~gaglDv~ 283 (348)
T 2w2k_A 213 SLEELARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK----PGSRIVNTARGPVISQDALIAALK--SGK-LLSAGLDVH 283 (348)
T ss_dssp SHHHHHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTS-EEEEEESSC
T ss_pred CHHHHhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC----CCCEEEECCCCchhCHHHHHHHHH--hCC-ceEEEeccC
Confidence 68898887 89887432 124788899999883 566777777643322333344444 455 433332221
Q ss_pred ceecCCCeeeecccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcc
Q 009519 475 NVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCD 525 (533)
Q Consensus 475 pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~ 525 (533)
..+-.... .--+..|+.+-|=++-....+ ...|...+++.|.+.
T Consensus 284 ~~EP~~~~--~L~~~~nviltPH~~~~t~e~-----~~~~~~~~~~ni~~~ 327 (348)
T 2w2k_A 284 EFEPQVSK--ELIEMKHVTLTTHIGGVAIET-----FHEFERLTMTNIDRF 327 (348)
T ss_dssp TTTTSCCH--HHHTSSSEEECCSCTTCSHHH-----HHHHHHHHHHHHHHH
T ss_pred CCCCCCCc--hhhcCCCEEEcCcCCCCCHHH-----HHHHHHHHHHHHHHH
Confidence 11100000 012356788888766322221 234455555555444
No 189
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=81.38 E-value=1.5 Score=42.06 Aligned_cols=104 Identities=23% Similarity=0.336 Sum_probs=60.2
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcc
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~ 384 (533)
.|++.+++..+. +|.. |++|+|+|.+|..+|..|... |. +++++|++- ++ -+.+
T Consensus 102 ~g~~~~l~~~~~---~l~~-~v~iiG~G~~g~~~a~~l~~~-----g~-------~v~v~~r~~----~~------~~~l 155 (263)
T 2d5c_A 102 PGFLEALKAGGI---PLKG-PALVLGAGGAGRAVAFALREA-----GL-------EVWVWNRTP----QR------ALAL 155 (263)
T ss_dssp HHHHHHHHHTTC---CCCS-CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH------HHHH
T ss_pred HHHHHHHHHhCC---CCCC-eEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH------HHHH
Confidence 478888887765 4556 999999999999998877642 42 588888631 11 1122
Q ss_pred ccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCC--HHHHHHhhhcCCCCCeEEecCC
Q 009519 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFN--EEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 385 A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft--eevv~~Ma~~~~erPIIFaLSN 445 (533)
++.... ...++.++ +. +|++|-+.. .+... ++.+. . +...+..+|+-++.
T Consensus 156 ~~~~~~-----~~~~~~~~-~~--~Divi~~tp-~~~~~~~~~~l~-~-~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 156 AEEFGL-----RAVPLEKA-RE--ARLLVNATR-VGLEDPSASPLP-A-ELFPEEGAAVDLVY 207 (263)
T ss_dssp HHHHTC-----EECCGGGG-GG--CSEEEECSS-TTTTCTTCCSSC-G-GGSCSSSEEEESCC
T ss_pred HHHhcc-----chhhHhhc-cC--CCEEEEccC-CCCCCCCCCCCC-H-HHcCCCCEEEEeec
Confidence 221000 01346666 55 899997665 33221 01221 1 11345668887764
No 190
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.25 E-value=1.6 Score=41.84 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.8
Q ss_pred ceEEEeCchhHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQ 344 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~ 344 (533)
.||.|+|+|..|..+|..|..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~ 24 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR 24 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHh
Confidence 489999999999999998865
No 191
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=81.22 E-value=3.2 Score=36.65 Aligned_cols=98 Identities=26% Similarity=0.326 Sum_probs=56.6
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.+|+|.|| |-.|..+++.|++ .| .++++++++.- ....+...+..+..-+ ..+..++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~D-----~~~~~~~~~ 63 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS---RLPSEGPRPAHVVVGD-----VLQAADVDK 63 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG---GSCSSSCCCSEEEESC-----TTSHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh---hcccccCCceEEEEec-----CCCHHHHHH
Confidence 68999998 8888888877765 34 26888887521 0011101111111110 012345888
Q ss_pred HhcccCCcEEEEeccCCCC---------CCHHHHHHhhhcCCCCCeEEecC
Q 009519 403 VVRKVKPHVLLGLSGVGGV---------FNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~---------Fteevv~~Ma~~~~erPIIFaLS 444 (533)
+++. +|++|=+.+.... .+..+++.|.+ ..-+.|||.=|
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~v~~Ss 111 (206)
T 1hdo_A 64 TVAG--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKA-HGVDKVVACTS 111 (206)
T ss_dssp HHTT--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHH-HTCCEEEEECC
T ss_pred HHcC--CCEEEECccCCCCCCccchHHHHHHHHHHHHHH-hCCCeEEEEee
Confidence 8886 8999977664321 25677888854 33456787544
No 192
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=80.91 E-value=1.7 Score=46.11 Aligned_cols=196 Identities=14% Similarity=0.185 Sum_probs=107.6
Q ss_pred ccccccCChhhHHHHHhcCCCCCeeEEEEec--------------------CceeeccCCCCCCcccccchhhhhHhh--
Q 009519 149 GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTD--------------------GSRILGLGDLGVQGIGIPIGKLDVYVA-- 206 (533)
Q Consensus 149 Glyis~~d~~~i~~~l~n~p~~~v~viVVTD--------------------G~rILGLGDlG~~Gm~I~~GKl~LY~a-- 206 (533)
|.|++..|...+..+|+.. +++++++.| |+.+=-+-++|-.-.-|.+++...+++
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 7777767777888888854 788888854 445555555665555666676654432
Q ss_pred ---hcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCCceeeeecCCCchHHHHHH
Q 009519 207 ---AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLE 283 (533)
Q Consensus 207 ---~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P~~~I~~EDf~~~~af~iL~ 283 (533)
=-|+. .-.+| ..+|+ +-.|+|+..+.+.+.. .. + +.++
T Consensus 254 Le~~~GiP-~~~~~----------------~p~G~-----------~~T~~~l~~la~~~g~---~~-----~---~~i~ 294 (458)
T 3pdi_B 254 LAERTGVP-DRRFG----------------MLYGL-----------DAVDAWLMALAEISGN---PV-----P---DRYK 294 (458)
T ss_dssp HHHHSCCC-EEEEC----------------CSCHH-----------HHHHHHHHHHHHHHSS---CC-----C---HHHH
T ss_pred HHHHHCCC-EEecC----------------CCcCH-----------HHHHHHHHHHHHHHCC---ch-----H---HHHH
Confidence 13554 11111 12222 3478888888887732 11 1 2344
Q ss_pred HHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEE
Q 009519 284 RYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL 363 (533)
Q Consensus 284 ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~l 363 (533)
+.|.+ ++.++.-....|.. .|++|+|.+.-..++++.|.+ .|+. -+.+
T Consensus 295 ~er~r------------------~~~~~~d~~~~l~G---krv~i~~~~~~~~~l~~~L~e-----lGm~------vv~~ 342 (458)
T 3pdi_B 295 RQRAQ------------------LQDAMLDTHFMLSS---ARTAIAADPDLLLGFDALLRS-----MGAH------TVAA 342 (458)
T ss_dssp HHHHH------------------HHHHHHHHHHHHTT---CEEEEECCHHHHHHHHHHHHT-----TTCE------EEEE
T ss_pred HHHHH------------------HHHHHHHHHHhcCC---CEEEEECCcHHHHHHHHHHHH-----CCCE------EEEE
Confidence 44432 12222222233445 899999999999999998854 4663 2222
Q ss_pred EeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeE
Q 009519 364 LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAI 440 (533)
Q Consensus 364 vD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPII 440 (533)
.-.. ..+.+.... ... -+. .+...|++.++..+||.+||-|- .+.+.+.+ .-|.|
T Consensus 343 ~~~~-----~~~~~~~~~--~~~---v~~--~D~~~le~~i~~~~pDllig~~~-----~~~~a~k~-----gip~~ 397 (458)
T 3pdi_B 343 VVPA-----RAAALVDSP--LPS---VRV--GDLEDLEHAARAGQAQLVIGNSH-----ALASARRL-----GVPLL 397 (458)
T ss_dssp EESS-----CCSCCTTTT--SSC---EEE--SHHHHHHHHHHHHTCSEEEECTT-----HHHHHHHT-----TCCEE
T ss_pred EECC-----CChhhhhCc--cCc---EEe--CCHHHHHHHHHhcCCCEEEEChh-----HHHHHHHc-----CCCEE
Confidence 2111 111121110 000 000 12234788899999999999663 34455555 35655
No 193
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=80.69 E-value=1.5 Score=46.76 Aligned_cols=36 Identities=8% Similarity=-0.179 Sum_probs=26.6
Q ss_pred ecccccceeechhhhHHHHHhCCcccCHHHHHHHHH
Q 009519 485 HVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAE 520 (533)
Q Consensus 485 ~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~ 520 (533)
.|++.-|-+++|.+.=++.++...-++.+.+..|.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 588888888888888777777344477777777655
No 194
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=80.21 E-value=1.6 Score=44.79 Aligned_cols=118 Identities=14% Similarity=0.210 Sum_probs=67.6
Q ss_pred CCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCC
Q 009519 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~ 398 (533)
+...||.|+|| |..|..+|..++. .|+. ..+.++|.+-=..++ ..+|.+. .|.. ... ....
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~--~~i---~~t~ 68 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEG--LNL---TFTS 68 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTT--CCC---EEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCC--Cce---EEcC
Confidence 44589999998 9999999965544 3552 369999973110000 0123221 2211 111 1235
Q ss_pred CHHHHhcccCCcEEEEecc---CCCC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCcccCCHHHHhccc
Q 009519 399 SLLEVVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHA 461 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~---~~g~-----------Fteevv~~Ma~~~~erPI-IFaLSNPt~~aE~tpe~A~~wt 461 (533)
++.+++++ +|++|=+.+ .+|- .-+++++.+.+ ++++-+ |+-.|||.. +...-+++.+
T Consensus 69 d~~~al~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~-~~p~a~~vlvvsNPvd---~~t~i~~k~s 140 (343)
T 3fi9_A 69 DIKEALTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKS-YCPDCKHVIIIFNPAD---ITGLVTLIYS 140 (343)
T ss_dssp CHHHHHTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHH-HCTTCCEEEECSSSHH---HHHHHHHHHH
T ss_pred CHHHHhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCcEEEEEecCchH---HHHHHHHHHc
Confidence 78899998 899874433 2332 23456666653 778885 888999974 4444455543
No 195
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=80.07 E-value=1.4 Score=44.16 Aligned_cols=127 Identities=17% Similarity=0.258 Sum_probs=73.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+.|..+|-.|+. .|+- ..++++|.+-=..++. .+|.+. .++....-.. ..+..+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~-----~~~~-----~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v-----~~~~~~ 70 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVN-----QSIV-----DELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRV-----KAGEYS 70 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCSC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEE-----EECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEE-----EeCCHH
Confidence 699999999999998887654 2432 4799999751000000 122222 2332111000 113477
Q ss_pred HhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCcEE
Q 009519 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Grai 466 (533)
++++ +|++|=+.+.+ |- +=+++++.|.+ +++.-+|+-.|||.. ...+-+++.+ .-.-+
T Consensus 71 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~t~~~~k~~~~p~~rv 144 (317)
T 3d0o_A 71 DCHD--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMA-SKFDGIFLVATNPVD---ILAYATWKFSGLPKERV 144 (317)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGE
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHHhCCCHHHE
Confidence 7887 89988444433 31 22456666654 789999999999986 4455555543 11246
Q ss_pred EecCCC
Q 009519 467 FASGSP 472 (533)
Q Consensus 467 ~AtGSP 472 (533)
|.+|.-
T Consensus 145 iG~gt~ 150 (317)
T 3d0o_A 145 IGSGTI 150 (317)
T ss_dssp EECTTH
T ss_pred EecCcc
Confidence 777653
No 196
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=80.05 E-value=1.4 Score=42.60 Aligned_cols=111 Identities=15% Similarity=0.063 Sum_probs=56.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCCh-hhhccccccCC-cCCccCCCCHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGD-FMGLREGASLL 401 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~-~k~~~A~~~~~-~~~~~~~~~L~ 401 (533)
.||.|+|+|+.|..+|..|.+......|. .+++++|+..-+ +.+.. ........... ........+-.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~------~~V~~~~r~~~~----~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 78 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGL------LEVSWIARGAHL----EAIRAAGGLRVVTPSRDFLARPTCVTDNP 78 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSS------EEEEEECCHHHH----HHHHHHTSEEEECSSCEEEECCSEEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCC------CCEEEEEcHHHH----HHHHhcCCeEEEeCCCCeEEecceEecCc
Confidence 38999999999999999987652211130 268888762110 00111 00000000000 00000011223
Q ss_pred HHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++++. +|++| ++..+. -.+++++.++....+..+|..++|...
T Consensus 79 ~~~~~--~D~vi-l~vk~~-~~~~v~~~i~~~l~~~~~iv~~~nG~~ 121 (317)
T 2qyt_A 79 AEVGT--VDYIL-FCTKDY-DMERGVAEIRPMIGQNTKILPLLNGAD 121 (317)
T ss_dssp HHHCC--EEEEE-ECCSSS-CHHHHHHHHGGGEEEEEEEEECSCSSS
T ss_pred cccCC--CCEEE-EecCcc-cHHHHHHHHHhhcCCCCEEEEccCCCC
Confidence 45554 78766 443233 358898888643344557777888754
No 197
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=79.85 E-value=0.99 Score=44.02 Aligned_cols=34 Identities=29% Similarity=0.588 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|. .++.++|++.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 689999999999999998864 343 2699999875
No 198
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=79.85 E-value=3.2 Score=42.29 Aligned_cols=83 Identities=19% Similarity=0.376 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCceEEEeCch-hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCC
Q 009519 300 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 378 (533)
Q Consensus 300 aaV~LAgli~Alr~~g~~l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~ 378 (533)
.-+|-.|++--|+..+.+++- .++||+|.+ -.|.-+|.||... |. .+.+|.|+
T Consensus 159 ~PcTp~gv~~lL~~~~i~l~G---k~vvViGRS~iVGkPla~LL~~~-----~A-------TVTi~Hs~----------- 212 (303)
T 4b4u_A 159 GSATPAGIMTILKENNIEIAG---KHAVVVGRSAILGKPMAMMLLQA-----NA-------TVTICHSR----------- 212 (303)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------
T ss_pred cCccHHHHHHHHHHHCCCCCC---CEEEEEeccccccchHHHHHHhc-----CC-------EEEEecCC-----------
Confidence 346778899999999999888 999999975 5688888777642 32 45555331
Q ss_pred hhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHH
Q 009519 379 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLK 428 (533)
Q Consensus 379 ~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~ 428 (533)
..+|.+.+++ +|++|...++++.++.||||
T Consensus 213 ------------------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 ------------------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp ------------------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred ------------------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1358888988 99999999999999999887
No 199
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=79.46 E-value=0.99 Score=44.89 Aligned_cols=99 Identities=15% Similarity=0.170 Sum_probs=56.9
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccc
Q 009519 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (533)
Q Consensus 306 gli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A 385 (533)
|++.+++..| . .|++|+|||.+|.+++..|.+. | .+|+++++. .++ ..... .+.
T Consensus 108 Gf~~~L~~~~----~---k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~k--a~~la-~~~ 161 (269)
T 3phh_A 108 GFYLSLKQKN----Y---QNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRG--LDFFQ-RLG 161 (269)
T ss_dssp HHHHHCC-------C---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTT--HHHHH-HHT
T ss_pred HHHHHHHHcC----C---CEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHH--HHHHH-HCC
Confidence 4666665433 5 8999999999999998888763 4 378888773 222 11111 111
Q ss_pred cccCCcCCccCCCCHHHHhcccCCcEEEEeccCC----CCCCHHHHH-HhhhcCCCCCeEEec-CCC
Q 009519 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG----GVFNEEVLK-AMRESDSVKPAIFAM-SNP 446 (533)
Q Consensus 386 ~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~----g~Fteevv~-~Ma~~~~erPIIFaL-SNP 446 (533)
-....+ .+| . ++|++|-++..+ -.+.++.+. .+. +..+|+=+ .||
T Consensus 162 ~~~~~~------~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~----~~~~v~D~vY~P 212 (269)
T 3phh_A 162 CDCFME------PPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK----EGKLAYDLAYGF 212 (269)
T ss_dssp CEEESS------CCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH----HCSEEEESCCSS
T ss_pred CeEecH------HHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC----CCCEEEEeCCCC
Confidence 000001 112 1 589999766533 157888666 453 46677765 466
No 200
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=79.44 E-value=1.1 Score=41.91 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----RK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCC
Confidence 6899999999999999988653 43 68999974
No 201
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=79.25 E-value=0.81 Score=43.84 Aligned_cols=33 Identities=27% Similarity=0.564 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 689999999999999998865 354 689999864
No 202
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.14 E-value=0.63 Score=46.23 Aligned_cols=106 Identities=15% Similarity=0.212 Sum_probs=56.6
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCc-CCccCCCCHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF-MGLREGASLL 401 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~-~~~~~~~~L~ 401 (533)
..||.|+|+|+-|..+|..|.+. |. +++++ ++.=-. +.+.........+.... ....-..++.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~-----G~-------~V~l~-~~~~~~---~~i~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA-----GH-------EVILI-ARPQHV---QAIEATGLRLETQSFDEQVKVSASSDPS 82 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEE-CCHHHH---HHHHHHCEEEECSSCEEEECCEEESCGG
T ss_pred CCcEEEECcCHHHHHHHHHHHHC-----CC-------eEEEE-EcHhHH---HHHHhCCeEEEcCCCcEEEeeeeeCCHH
Confidence 38999999999999999998754 42 45554 321000 00000000000000000 0000112343
Q ss_pred HHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 009519 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~ 449 (533)
+ ++. +|++| ++. +-...+++++.++....+..+|..++|....
T Consensus 83 ~-~~~--~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 83 A-VQG--ADLVL-FCV-KSTDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp G-GTT--CSEEE-ECC-CGGGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred H-cCC--CCEEE-EEc-ccccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 3 443 78766 443 3337789999996544566788889998764
No 203
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=78.86 E-value=0.79 Score=48.50 Aligned_cols=33 Identities=30% Similarity=0.506 Sum_probs=29.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||+|+|||..|..+|+.|+.+++ ++|.++|.+
T Consensus 41 ~~VlvvG~GGlGs~va~~La~aGv-----------g~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALSGF-----------RQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHTTC-----------CCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCC-----------CEEEEEcCC
Confidence 899999999999999999987644 689999976
No 204
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=78.79 E-value=8 Score=39.35 Aligned_cols=83 Identities=22% Similarity=0.406 Sum_probs=45.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccC-C--cCCccCCCCH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG-D--FMGLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~-~--~~~~~~~~~L 400 (533)
++|+|+|||+.|...+.+... .|. ++++.+|+ ++.+..+++.-. + +. ....++
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~-----------~~~~~~~~~~lGa~~vi~--~~~~~~ 270 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEP-----------SEVRRNLAKELGADHVID--PTKENF 270 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS-----------CHHHHHHHHHHTCSEEEC--TTTSCH
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC-----------CHHHHHHHHHcCCCEEEc--CCCCCH
Confidence 699999999877766555443 354 47887765 233444444210 0 00 011345
Q ss_pred HHHhcc----cCCcEEEEeccCCCCCCHHHHHHh
Q 009519 401 LEVVRK----VKPHVLLGLSGVGGVFNEEVLKAM 430 (533)
Q Consensus 401 ~e~V~~----vkptvLIG~S~~~g~Fteevv~~M 430 (533)
.+.++. -+.|++|-+++.+....+.+++.+
T Consensus 271 ~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 271 VEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 555543 368999987763222334555555
No 205
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=78.79 E-value=1.7 Score=42.91 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.++|..|.+. |. +++++|++
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 7999999999999999998764 43 57777763
No 206
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=78.67 E-value=3.4 Score=41.83 Aligned_cols=222 Identities=14% Similarity=0.084 Sum_probs=121.0
Q ss_pred CCc-eeeeecCCCchHHHHHHHHhccCceeccCc---chhHHHHHHHHHHHHHHh---------CC------C--CCCCC
Q 009519 264 PKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------S--LTDFA 322 (533)
Q Consensus 264 P~~-~I~~EDf~~~~af~iL~ryr~~~~~FnDDi---QGTaaV~LAgli~Alr~~---------g~------~--l~dl~ 322 (533)
|+. .|+.-=.+..|- .+-.--+.-+++.|--- +.+|=-+++-+++..|-. |+ . -.+|.
T Consensus 66 ~~Lk~I~~~~~G~d~i-d~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~ 144 (330)
T 4e5n_A 66 PELRVIGCALKGFDNF-DVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLD 144 (330)
T ss_dssp TTCCEEEESSSCCTTB-CHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCST
T ss_pred CCCcEEEECCCccccc-CHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccC
Confidence 554 555544444432 12111123466665422 234555677777776531 10 0 12445
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..+|.|+|.|..|..+|+.+... |+ +++.+|+... .....+..-+ ...+|.|
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~~------~~~~~~~~g~----------~~~~l~e 196 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW-----GA-------TLQYHEAKAL------DTQTEQRLGL----------RQVACSE 196 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS-----CC-------EEEEECSSCC------CHHHHHHHTE----------EECCHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCCCC------cHhHHHhcCc----------eeCCHHH
Confidence 59999999999999999987543 54 6888887421 1111110001 1246999
Q ss_pred HhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcceec
Q 009519 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL 478 (533)
Q Consensus 403 ~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~pv~~ 478 (533)
+++. .|+++=.- ...+.++++.++.|. +..++.=.|+-..--|-.-.+|++ +|+.-.|.=-=|++-.+
T Consensus 197 ll~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~E~~ 268 (330)
T 4e5n_A 197 LFAS--SDFILLALPLNADTLHLVNAELLALVR----PGALLVNPCRGSVVDEAAVLAALE--RGQLGGYAADVFEMEDW 268 (330)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCGGGCT
T ss_pred HHhh--CCEEEEcCCCCHHHHHHhCHHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCccEEEecccccccc
Confidence 9988 89887442 124789999999993 678888888754433333445544 55543332111211100
Q ss_pred CCCeeeec-------ccccceeechhhhHHHHHhCCcccCHHHHHHHHHHHhcccCCC
Q 009519 479 GNGKIGHV-------NQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEWYVCDNCNE 529 (533)
Q Consensus 479 ~~G~~~~p-------~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~alA~~v~~~ 529 (533)
.....| -+..|+.+-|=++-.... -.+.|...+++-|.+....+
T Consensus 269 --~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e-----~~~~~~~~~~~ni~~~~~g~ 319 (330)
T 4e5n_A 269 --ARADRPQQIDPALLAHPNTLFTPHIGSAVRA-----VRLEIERCAAQNILQALAGE 319 (330)
T ss_dssp --TCTTCCSSCCHHHHTCSSEEECSSCTTCCHH-----HHHHHHHHHHHHHHHHHTTS
T ss_pred --cccCCCCCCCchHHcCCCEEECCcCCCChHH-----HHHHHHHHHHHHHHHHHcCC
Confidence 000012 245689999987643222 23556666666666555443
No 207
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=78.59 E-value=13 Score=37.27 Aligned_cols=103 Identities=10% Similarity=0.077 Sum_probs=65.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccc-cCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~-~~~~~~~~~~~~L~e 402 (533)
.++.|+|+|..|-.+++.+... .+. ++|+++|+. + .......+.+. .-+. ... ++.|
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~--a~~la~~l~~~~g~~~---~~~-~~~e 179 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------A--SPEILERIGRRCGVPA---RMA-APAD 179 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------C--CHHHHHHHHHHHTSCE---EEC-CHHH
T ss_pred cEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------H--HHHHHHHHHHhcCCeE---EEe-CHHH
Confidence 7999999999999888877653 233 689999986 1 12222222211 1010 123 8999
Q ss_pred HhcccCCcEEEEeccCC-CCCCHHHHHHhhhcCCCCCeEEecCC--CCCcccCCHHHHh
Q 009519 403 VVRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAADAF 458 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~-g~Fteevv~~Ma~~~~erPIIFaLSN--Pt~~aE~tpe~A~ 458 (533)
+++. .|++|-+.... -.|..++ ..+..+|..++. |. +.|+.++-..
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~-------l~~G~~V~~vGs~~p~-~~El~~~~~~ 228 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQA-------LRAGAFVGAIGSSLPH-TRELDDEALR 228 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGG-------CCTTCEEEECCCSSTT-CCCCCHHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHH-------cCCCcEEEECCCCCCc-hhhcCHHHHh
Confidence 9998 99999665432 3454432 346788998876 44 4699988643
No 208
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=78.16 E-value=1.3 Score=41.94 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. ++.++|++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred cCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 6899999999999999888753 43 68999997
No 209
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=78.11 E-value=11 Score=37.68 Aligned_cols=143 Identities=19% Similarity=0.218 Sum_probs=88.0
Q ss_pred hCCCc-eeeeecCCCchHHHHHHHHhccCceec-cCcch--hHHHHHHHHHHHHHHh---------C----C-CCCCCCC
Q 009519 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFN-DDIQG--TAGVALAGLLGTVRAQ---------G----L-SLTDFAD 323 (533)
Q Consensus 262 ~~P~~-~I~~EDf~~~~af~iL~ryr~~~~~Fn-DDiQG--TaaV~LAgli~Alr~~---------g----~-~l~dl~~ 323 (533)
..|+. .|+.--.+..|- .+ +..+..+++.| -+... +|=-+++.+++..|-. | . +..+|..
T Consensus 47 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g 124 (303)
T 1qp8_A 47 KMPRLKFIQVVTAGLDHL-PW-ESIPPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQG 124 (303)
T ss_dssp HCTTCCCEEBSSSCCTTS-CC-TTSCTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTT
T ss_pred hCCCCcEEEECCcCcccc-cH-HHHhcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence 34654 555443333331 11 11233466666 33333 3334788888877632 1 1 2235666
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.++.|+|.|..|..+|+.+... |+ +++.+|+..- + . .. ....+|.|+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~dr~~~-----~---~---~~----------~~~~~l~el 171 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-----GA-------QVRGFSRTPK-----E---G---PW----------RFTNSLEEA 171 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-----TC-------EEEEECSSCC-----C---S---SS----------CCBSCSHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCcc-----c---c---Cc----------ccCCCHHHH
Confidence 9999999999999999988653 43 6888887431 1 0 00 012468898
Q ss_pred hcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 404 VRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 404 V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
++. .|+++=.- ...+.|+++.++.|. +..++.=.|.
T Consensus 172 l~~--aDvV~l~~P~~~~t~~~i~~~~l~~mk----~gailin~sr 211 (303)
T 1qp8_A 172 LRE--ARAAVCALPLNKHTRGLVKYQHLALMA----EDAVFVNVGR 211 (303)
T ss_dssp HTT--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTCEEEECSC
T ss_pred Hhh--CCEEEEeCcCchHHHHHhCHHHHhhCC----CCCEEEECCC
Confidence 987 89887442 224778889998883 6778888887
No 210
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=77.75 E-value=0.79 Score=46.35 Aligned_cols=126 Identities=20% Similarity=0.282 Sum_probs=73.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC--ccccCC-CCCChhhhccccccCCcCCccCCCCH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKER-KNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G--Li~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
.||.|+|||..|.++|..+.. .|+ ..+.++|.+- -..++. .+|.+. .++........ ...+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~---~t~d- 72 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANII---GTSD- 72 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEE---EESC-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEE---EcCC-
Confidence 799999999999999988875 344 2799999861 111111 122221 13322111110 0122
Q ss_pred HHHhcccCCcEEEEecc---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--Cc
Q 009519 401 LEVVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--EN 464 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~---~~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Gr 464 (533)
.+++++ .|++|=+.+ .+|- .-+++++.+++ +++.-+|+-.|||.. +...-+++.+. -+
T Consensus 73 ~~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vlvvsNPvd---~~t~~~~k~sg~p~~ 146 (315)
T 3tl2_A 73 YADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAK-HSPNAIIVVLTNPVD---AMTYSVFKEAGFPKE 146 (315)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHHHCCCGG
T ss_pred HHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEECCChHH---HHHHHHHHhcCCChH
Confidence 466777 898774433 3332 22567777754 788999999999985 44444555431 13
Q ss_pred EEEecCC
Q 009519 465 IVFASGS 471 (533)
Q Consensus 465 ai~AtGS 471 (533)
-+|++|.
T Consensus 147 rviG~gt 153 (315)
T 3tl2_A 147 RVIGQSG 153 (315)
T ss_dssp GEEECCH
T ss_pred HEEeecc
Confidence 4667753
No 211
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=77.56 E-value=4.2 Score=39.84 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.6
Q ss_pred ceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+| +|..|..+|..|... |. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-----G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-----GY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-----TC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 4899999 999999999988653 43 58888763
No 212
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=77.30 E-value=0.83 Score=46.25 Aligned_cols=125 Identities=17% Similarity=0.220 Sum_probs=72.2
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLL 401 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~ 401 (533)
..||.|+|||..|.++|..|.. .|+. .+.++|.+-=..++- .+|.+.. .+........ ...+ .
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~-----~~~~------~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~---~t~d-~ 68 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI-----KQLG------DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVR---GTND-Y 68 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEE---EESC-G
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCc------eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEE---EcCC-H
Confidence 3799999999999999987765 3441 699999852110000 0121110 1111111110 0123 4
Q ss_pred HHhcccCCcEEEEeccC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCC---c
Q 009519 402 EVVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGE---N 464 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~---~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~G---r 464 (533)
+++++ +|++|=+.+. +|- .-+++++.+.+ +++.-+|+-.|||.. ...+-+++.+ | +
T Consensus 69 ~a~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vivvtNPvd---~~t~~~~k~s-g~p~~ 141 (321)
T 3p7m_A 69 KDLEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKH-NCPNAFVICITNPLD---IMVNMLQKFS-GVPDN 141 (321)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHHH-CCCGG
T ss_pred HHHCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHhc-CCCHH
Confidence 67887 8987744433 332 12556667754 788889999999985 4445565654 3 4
Q ss_pred EEEecC
Q 009519 465 IVFASG 470 (533)
Q Consensus 465 ai~AtG 470 (533)
-+|++|
T Consensus 142 rviG~~ 147 (321)
T 3p7m_A 142 KIVGMA 147 (321)
T ss_dssp GEEEEC
T ss_pred HEEeec
Confidence 577877
No 213
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=77.01 E-value=1.4 Score=42.39 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|. ++.++|++.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999988754 343 689999864
No 214
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=77.00 E-value=2.7 Score=41.83 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.++|..|... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988764 41 268888875
No 215
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=76.72 E-value=1.4 Score=41.96 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|||+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 589999999999999988765 343 68899986
No 216
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=76.67 E-value=10 Score=38.50 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=75.7
Q ss_pred CceeccCcc---hhHHHHHHHHHHHHHHh---------CC-------CCCCCCCceEEEeCchhHHHHHHHHHHHHHHHH
Q 009519 289 FCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (533)
Q Consensus 289 ~~~FnDDiQ---GTaaV~LAgli~Alr~~---------g~-------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 349 (533)
+.|.|-.-- .+|=-+++.+++..|-. |. .-.+|...++.|+|.|..|..+|+.+...
T Consensus 88 I~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~f---- 163 (334)
T 3kb6_A 88 ILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF---- 163 (334)
T ss_dssp CEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhccc----
Confidence 666664332 23444567677665421 10 11234449999999999999999988765
Q ss_pred cCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEe----ccCCCCCCHH
Q 009519 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEE 425 (533)
Q Consensus 350 ~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~----S~~~g~Ftee 425 (533)
|+ +++.+|+.. + .......+ ...+|.|.++. .|+++=. ...-|.|+++
T Consensus 164 -g~-------~v~~~d~~~-----~---~~~~~~~~----------~~~~l~ell~~--sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 164 -GM-------KVLCYDVVK-----R---EDLKEKGC----------VYTSLDELLKE--SDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp -TC-------EEEEECSSC-----C---HHHHHTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHH
T ss_pred -Cc-------eeeecCCcc-----c---hhhhhcCc----------eecCHHHHHhh--CCEEEEcCCCChhhccCcCHH
Confidence 33 677777521 1 11111111 23579999988 8998743 1224899999
Q ss_pred HHHHhhhcCCCCCeEEecCC
Q 009519 426 VLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 426 vv~~Ma~~~~erPIIFaLSN 445 (533)
.++.|. +..++.=.|.
T Consensus 216 ~l~~mk----~~a~lIN~aR 231 (334)
T 3kb6_A 216 RISLMK----DGVYLINTAR 231 (334)
T ss_dssp HHHHSC----TTEEEEECSC
T ss_pred HHhhcC----CCeEEEecCc
Confidence 999993 5677776665
No 217
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=76.53 E-value=1.5 Score=45.28 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|||+|||.||+..|..|.+.. .| .+|.++|+..-
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 68999999999999999887641 13 36888887643
No 218
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=76.50 E-value=2.9 Score=44.27 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.5
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+.||.|+|+|..|+.+|..|.+. | .+++++|++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 48999999999999999998764 4 268888874
No 219
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.46 E-value=1.3 Score=42.93 Aligned_cols=31 Identities=29% Similarity=0.551 Sum_probs=24.8
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-|+|+|||.||+..|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988865 465 57777764
No 220
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=76.43 E-value=3.2 Score=41.32 Aligned_cols=58 Identities=24% Similarity=0.324 Sum_probs=37.8
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 294 DDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++.++.....++..+.|++..+.+.. ++|+|+|||+.|...+.+... .|. ++|+.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVRLG----DPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCTT----CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44455544455666677777665554 499999999887776655443 354 46888875
No 221
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=76.21 E-value=4.8 Score=40.54 Aligned_cols=142 Identities=18% Similarity=0.257 Sum_probs=75.5
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC
Q 009519 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (533)
Q Consensus 294 DDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~ 373 (533)
++.++.....++..+.+++..+.+.. ++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 158 ~~~~aal~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~------- 215 (370)
T 4ej6_A 158 DPVHGAFCEPLACCLHGVDLSGIKAG----STVAILGGGVIGLLTVQLARL-----AGA------TTVILSTR------- 215 (370)
T ss_dssp CTTGGGGHHHHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS-------
T ss_pred CHHHHhhhhHHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC-------
Confidence 34455444556666777777776554 499999998777766555443 354 47887765
Q ss_pred CCCCChhhhccccccC-C-cCCccCCCCHHHHhcc---c---CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 374 RKNLDPAAAPFAKDPG-D-FMGLREGASLLEVVRK---V---KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 374 r~~l~~~k~~~A~~~~-~-~~~~~~~~~L~e~V~~---v---kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
++.+..+++.-. + .- .....++.+.++. . +.|++|=+++. +..-++.++.++. .-+ |.-+..
T Consensus 216 ----~~~~~~~a~~lGa~~vi-~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~-~~~~~~~~~~l~~--~G~--vv~~G~ 285 (370)
T 4ej6_A 216 ----QATKRRLAEEVGATATV-DPSAGDVVEAIAGPVGLVPGGVDVVIECAGV-AETVKQSTRLAKA--GGT--VVILGV 285 (370)
T ss_dssp ----CHHHHHHHHHHTCSEEE-CTTSSCHHHHHHSTTSSSTTCEEEEEECSCC-HHHHHHHHHHEEE--EEE--EEECSC
T ss_pred ----CHHHHHHHHHcCCCEEE-CCCCcCHHHHHHhhhhccCCCCCEEEECCCC-HHHHHHHHHHhcc--CCE--EEEEec
Confidence 233444444210 0 00 0112456666554 1 57888877652 3334556666632 222 222333
Q ss_pred CCC--cccCCHHHHhcccCCcEEEec
Q 009519 446 PTM--NAECTAADAFKHAGENIVFAS 469 (533)
Q Consensus 446 Pt~--~aE~tpe~A~~wt~Grai~At 469 (533)
+.. ..+..+.+.+. .+..|..+
T Consensus 286 ~~~~~~~~~~~~~~~~--~~~~i~g~ 309 (370)
T 4ej6_A 286 LPQGEKVEIEPFDILF--RELRVLGS 309 (370)
T ss_dssp CCTTCCCCCCHHHHHH--TTCEEEEC
T ss_pred cCCCCccccCHHHHHh--CCcEEEEe
Confidence 322 34566666543 44455443
No 222
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=76.03 E-value=1.4 Score=36.96 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|..|..+++.+.. .|. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 789999999999999988765 342 57888874
No 223
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=75.95 E-value=2.1 Score=43.04 Aligned_cols=87 Identities=17% Similarity=0.237 Sum_probs=51.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|... |. +++++|++. ... ...++.. +... .++.|+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~~---------~~~-~~~a~~~----G~~~-~~~~e~ 69 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRSG---------SAT-VAKAEAH----GLKV-ADVKTA 69 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCTT---------CHH-HHHHHHT----TCEE-ECHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECCh---------HHH-HHHHHHC----CCEE-ccHHHH
Confidence 7999999999999999888653 43 577777632 110 1122211 0011 268888
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHH-HhhhcCCCCCeEE
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLK-AMRESDSVKPAIF 441 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~-~Ma~~~~erPIIF 441 (533)
++. +|++| ++. |-...+++++ .++....+..+|.
T Consensus 70 ~~~--aDvVi-lav-p~~~~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 70 VAA--ADVVM-ILT-PDEFQGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHT--CSEEE-ECS-CHHHHHHHHHHHTGGGCCTTCEEE
T ss_pred Hhc--CCEEE-EeC-CcHHHHHHHHHHHHhhCCCCCEEE
Confidence 876 88877 443 3333478887 7654334444555
No 224
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=75.94 E-value=1.2 Score=49.63 Aligned_cols=33 Identities=36% Similarity=0.518 Sum_probs=30.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||+|+|+|..|.-+|+.|+.+++ .+|.++|.+
T Consensus 18 s~VlVVGaGGLGsevak~La~aGV-----------G~ItlvD~D 50 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGF-----------SHIDLIDLD 50 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------CEEEEEECC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC-----------CeEEEecCC
Confidence 899999999999999999998754 699999986
No 225
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=75.72 E-value=1.2 Score=42.63 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. ++.++|+.
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 6899999999999999988763 53 58888883
No 226
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=75.68 E-value=5.8 Score=38.42 Aligned_cols=104 Identities=16% Similarity=0.220 Sum_probs=59.7
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCCh----hhhccccccCCcCCccCCC
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP----AAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~----~k~~~A~~~~~~~~~~~~~ 398 (533)
.||+|.|| |-.|..+++.|++. |-. -+++.+|+...-.. ...+.. .+..+..-+ ..+..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-----g~~-----~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~D-----l~d~~ 88 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQS-----YET-----YKIINFDALTYSGN-LNNVKSIQDHPNYYFVKGE-----IQNGE 88 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHH-----CTT-----EEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECC-----TTCHH
T ss_pred CeEEEECCccHHHHHHHHHHHhh-----CCC-----cEEEEEeccccccc-hhhhhhhccCCCeEEEEcC-----CCCHH
Confidence 79999998 88899988888764 321 26777776532110 011111 011111110 11234
Q ss_pred CHHHHhcccCCcEEEEeccCCCCC----------------CHHHHHHhhhcCCCCCeEEecC
Q 009519 399 SLLEVVRKVKPHVLLGLSGVGGVF----------------NEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~F----------------teevv~~Ma~~~~erPIIFaLS 444 (533)
++.++++..++|++|=+.+....- |..+++++.+ ..-+-+||.=|
T Consensus 89 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~SS 149 (346)
T 4egb_A 89 LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK-YPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHH-STTSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCc
Confidence 688889888899999776643211 3567787754 44455887533
No 227
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=75.68 E-value=1.8 Score=43.61 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+.. ..| .+|.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~--~~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV--GSK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH--GGG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--CCC-------CeEEEEeCCC
Confidence 47999999999999999987721 123 3788888765
No 228
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=75.63 E-value=1.7 Score=43.52 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=27.8
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.-+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 37899999999999999988764 54 688888764
No 229
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=75.53 E-value=3.4 Score=39.68 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=24.9
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
||.|+|+|..|..+|..|... |. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 799999999999999988653 43 57888763
No 230
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=75.36 E-value=1.8 Score=38.17 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-+++|+|+|.+|+..|..|.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 4799999999999999888753 4 378889875
No 231
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=74.83 E-value=4.2 Score=40.50 Aligned_cols=49 Identities=29% Similarity=0.434 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 303 ~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.++..+.|++..+.+.. ++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVTLG----HKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44455666666655544 599999999877776655443 343 47888875
No 232
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=74.76 E-value=2.8 Score=42.26 Aligned_cols=120 Identities=19% Similarity=0.228 Sum_probs=64.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
-||+|+|||-.|--+|+.|.+ ..++.++|+.. ..+...+ +++..-. .+ ..+..+|.++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~------~~~~~~~-~~~~~~~-~d-~~d~~~l~~~ 74 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN------ENLEKVK-EFATPLK-VD-ASNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH------HHHHHHT-TTSEEEE-CC-TTCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH------HHHHHHh-ccCCcEE-Ee-cCCHHHHHHH
Confidence 589999999998888776632 13577777631 1111111 1111100 00 0123468888
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCCcEEEecCCCCcc
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFEN 475 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~Grai~AtGSPf~p 475 (533)
+++ .|++|-+ .|..+...++++-.+ +... ++-+|--.+....--++|.+ .|..++ .|.=|+|
T Consensus 75 ~~~--~DvVi~~--~p~~~~~~v~~~~~~--~g~~-yvD~s~~~~~~~~l~~~a~~--~g~~~i-~~~G~~P 136 (365)
T 3abi_A 75 MKE--FELVIGA--LPGFLGFKSIKAAIK--SKVD-MVDVSFMPENPLELRDEAEK--AQVTIV-FDAGFAP 136 (365)
T ss_dssp HTT--CSEEEEC--CCGGGHHHHHHHHHH--HTCE-EEECCCCSSCGGGGHHHHHH--TTCEEE-CCCBTTT
T ss_pred HhC--CCEEEEe--cCCcccchHHHHHHh--cCcc-eEeeeccchhhhhhhhhhcc--CCceee-ecCCCCC
Confidence 887 7998854 467788999988754 2223 55566433322223344544 443332 3333554
No 233
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=74.63 E-value=2.1 Score=37.34 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=27.0
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+.+|+|+|+|..|..+++.|... | .++.++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 47999999999999999988653 4 368889874
No 234
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=74.58 E-value=2.3 Score=36.73 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|..|..+|+.|.+. |. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----DI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 3899999999999999988753 43 68889873
No 235
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=74.49 E-value=1.7 Score=43.50 Aligned_cols=33 Identities=24% Similarity=0.560 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 799999999999999998865 354 688898764
No 236
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=74.46 E-value=2 Score=36.76 Aligned_cols=32 Identities=31% Similarity=0.634 Sum_probs=26.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|..|..+|+.|.+. |. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-----g~-------~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-----GK-------KVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988753 43 68888873
No 237
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=74.43 E-value=1.9 Score=44.15 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+||||+|+|.||+..|..|.+... . -+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~-----~-----~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMP-----D-----LKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-----T-----CEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCc-----C-----CeEEEEcCC
Confidence 589999999999999999865421 1 268888875
No 238
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=74.43 E-value=1.3 Score=43.51 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
-.|+|+|||.||+..|..|.+ .|+ ++.++|++-.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 679999999999999988875 354 5888888653
No 239
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=74.39 E-value=1.8 Score=43.81 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=28.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCC
Confidence 689999999999999998865 3542 3799999865
No 240
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.26 E-value=2.3 Score=38.03 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=26.8
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+.+|+|+|+|..|..+|+.|... .|. +++++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~----~g~-------~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRAR----YGK-------ISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHH----HCS-------CEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc----cCC-------eEEEEECC
Confidence 37999999999999999988653 142 68888873
No 241
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=74.24 E-value=1.8 Score=44.57 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|+|+|||.||+..|..|.+. |. ++.++++..-
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~-----g~-------~v~v~E~~~~ 45 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKA-----GY-------KVTVLEARTR 45 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeccCC
Confidence 7999999999999999888753 42 6777777543
No 242
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=74.15 E-value=1.9 Score=42.88 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|+|+|||.||+..|..|.+. |+ ++.++|+.-.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~-----G~-------~v~viE~~~~ 45 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQN-----GW-------DVRLHEKSSE 45 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEecCCC
Confidence 7899999999999999888653 53 6888887543
No 243
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=74.00 E-value=1.9 Score=41.51 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRA-----QL-------STLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHc-----CC-------cEEEEeCC
Confidence 6899999999999999887653 43 68999987
No 244
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=73.96 E-value=1.8 Score=43.80 Aligned_cols=125 Identities=18% Similarity=0.278 Sum_probs=70.8
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||.|+|||..|.++|..|+.. |+- ..+.++|.+-=..++. .+|.+. ..+....... ...+..++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v----~~~~~~~a 66 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DVA-----KEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRV----TGTNDYGP 66 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCS-----SEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEE----EEESSSGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEE----EECCCHHH
Confidence 799999999999999988764 431 4799999853111100 012211 1111111000 00134677
Q ss_pred hcccCCcEEEEecc---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--CcEEE
Q 009519 404 VRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIVF 467 (533)
Q Consensus 404 V~~vkptvLIG~S~---~~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Grai~ 467 (533)
+++ +|++|=+.+ .+|- +-+++++.+.+ +++..+|+-.|||.. ....-+++.+. -+-+|
T Consensus 67 ~~~--aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vivvtNPvd---~~t~~~~k~~g~p~~rvi 140 (314)
T 3nep_X 67 TED--SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVE-GSPDSTIIVVANPLD---VMTYVAYEASGFPTNRVM 140 (314)
T ss_dssp GTT--CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHT-TCTTCEEEECCSSHH---HHHHHHHHHHTCCGGGEE
T ss_pred hCC--CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHH-hCCCcEEEecCCchh---HHHHHHHHhcCCChHHEE
Confidence 877 898773333 3332 22456667754 899999999999985 44444555441 13466
Q ss_pred ecC
Q 009519 468 ASG 470 (533)
Q Consensus 468 AtG 470 (533)
++|
T Consensus 141 G~~ 143 (314)
T 3nep_X 141 GMA 143 (314)
T ss_dssp ECC
T ss_pred eec
Confidence 766
No 245
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=73.89 E-value=1.8 Score=42.46 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
..|+|+|||.+|+.+|..|.+. |+ ++.++|+..+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~-----G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKE-----NK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCCCC
Confidence 6899999999999999988763 53 6999998643
No 246
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=73.83 E-value=2.7 Score=42.63 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
..|||+|||.+|+.+|..|.+... .++.++|+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~-----------~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSG-----------GSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC-----------SCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-----------CcEEEEcc
Confidence 789999999999999999887530 27999998
No 247
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=73.72 E-value=2 Score=41.48 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999998875 354 68999987
No 248
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=73.58 E-value=1.8 Score=41.50 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.+|+..|..|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-----G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 5799999999999999988753 54 588888763
No 249
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=73.57 E-value=5 Score=40.71 Aligned_cols=104 Identities=16% Similarity=0.185 Sum_probs=53.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe---ccCc-ccc--CCCCCChhhhccccccC---CcC-C
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD---KDGL-ITK--ERKNLDPAAAPFAKDPG---DFM-G 393 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD---~~GL-i~~--~r~~l~~~k~~~A~~~~---~~~-~ 393 (533)
.||.|+|||+.|..+|..|... .| .+++++| ++.- +.. .+..+. ........ ... .
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~----~G-------~~V~~~~~~~r~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~ 68 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASR----DG-------VEVRVLTLFADEAERWTKALGADELT---VIVNEKDGTQTEVKSR 68 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS----TT-------EEEEEECCSTTHHHHHHHHHTTSCEE---EEEECSSSCEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhC----CC-------CEEEEEeCCCCcHHHHHHHHhhccce---eeeecCCCccceeecc
Confidence 4899999999999999888541 13 2678887 4210 000 000000 00000000 000 0
Q ss_pred cc-CCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 394 LR-EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 394 ~~-~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
.. ...++.|+++. +|++| ++. +--..+++++.++....+..+|..++|
T Consensus 69 ~~~~~~~~~~a~~~--aD~Vi-lav-~~~~~~~v~~~l~~~l~~~~ivv~~~~ 117 (404)
T 3c7a_A 69 PKVITKDPEIAISG--ADVVI-LTV-PAFAHEGYFQAMAPYVQDSALIVGLPS 117 (404)
T ss_dssp CSEEESCHHHHHTT--CSEEE-ECS-CGGGHHHHHHHHTTTCCTTCEEEETTC
T ss_pred ceEEeCCHHHHhCC--CCEEE-EeC-chHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 00 12467888876 78765 332 333468888888653344556665433
No 250
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=73.53 E-value=1.9 Score=40.67 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEE-Eecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~l-vD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. ++.+ +|+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 6899999999999999988763 43 4566 8873
No 251
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.42 E-value=2 Score=34.77 Aligned_cols=83 Identities=19% Similarity=0.201 Sum_probs=50.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhh---hccccccCCcCCccCCCCH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA---APFAKDPGDFMGLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k---~~~A~~~~~~~~~~~~~~L 400 (533)
.+|+|+|+|..|..+++.|... |. .+++++|++. . .+...+ ..+..- + ..+..++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-----g~------~~v~~~~r~~----~--~~~~~~~~~~~~~~~--d---~~~~~~~ 63 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-----SN------YSVTVADHDL----A--ALAVLNRMGVATKQV--D---AKDEAGL 63 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----SS------EEEEEEESCH----H--HHHHHHTTTCEEEEC--C---TTCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCH----H--HHHHHHhCCCcEEEe--c---CCCHHHH
Confidence 6999999999999998887653 41 3688888741 1 111111 001000 0 0122457
Q ss_pred HHHhcccCCcEEEEeccCCCCCCHHHHHHhhh
Q 009519 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~ 432 (533)
.++++. +|++|=+. |..++..+++.+.+
T Consensus 64 ~~~~~~--~d~vi~~~--~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 64 AKALGG--FDAVISAA--PFFLTPIIAKAAKA 91 (118)
T ss_dssp HHHTTT--CSEEEECS--CGGGHHHHHHHHHH
T ss_pred HHHHcC--CCEEEECC--CchhhHHHHHHHHH
Confidence 777775 89998654 45577888887754
No 252
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=73.42 E-value=3 Score=41.51 Aligned_cols=129 Identities=20% Similarity=0.315 Sum_probs=74.5
Q ss_pred eEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec--cC-ccccCCCCCChhhhccccccCCcCCccCCCCH
Q 009519 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DG-LITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (533)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~--~G-Li~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L 400 (533)
||+|.|| |..|..++..|+. .|+- ..++++|. +- .+.....+|.+.. ++....-... ....++
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~--~~~d~l 68 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPFM-----KDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIY--VESDEN 68 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTTC-----CEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEE--EEETTC
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCCC-----CEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEE--eCCcch
Confidence 8999999 9999998887753 3432 46999996 21 0000000122211 2221000000 001237
Q ss_pred HHHhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhccc--CCc
Q 009519 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GEN 464 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt--~Gr 464 (533)
.+++++ .|++|=+.+.+ |- .++++++.|.+ ++ +.+|+--|||.. ...+-+++.+ .-+
T Consensus 69 ~~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~-~~~vlv~SNPv~---~~t~~~~k~~~~p~~ 141 (313)
T 1hye_A 69 LRIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAE-IC-DTKIFVITNPVD---VMTYKALVDSKFERN 141 (313)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HC-CCEEEECSSSHH---HHHHHHHHHHCCCTT
T ss_pred HHHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hC-CeEEEEecCcHH---HHHHHHHHhhCcChh
Confidence 888988 89888555543 32 46678888864 77 889999999986 4455555542 123
Q ss_pred EEEecCCCC
Q 009519 465 IVFASGSPF 473 (533)
Q Consensus 465 ai~AtGSPf 473 (533)
-+|++|.=.
T Consensus 142 rviG~gt~L 150 (313)
T 1hye_A 142 QVFGLGTHL 150 (313)
T ss_dssp SEEECTTHH
T ss_pred cEEEeCccH
Confidence 577876443
No 253
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=73.21 E-value=1.9 Score=42.48 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.+|+.+|..|.+. |. ++.++|+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~-----G~-------~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKR-----GE-------EVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 6899999999999999988753 53 699999874
No 254
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=73.14 E-value=5.9 Score=38.91 Aligned_cols=48 Identities=23% Similarity=0.287 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
....+.+++..+.+..| +++|+|||+.|...+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~~~g~----~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGVKPGD----WQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTCCTTC----EEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCCCCCC----EEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 34456778877776555 999999999887666555433 23 47888876
No 255
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=73.08 E-value=2.5 Score=43.35 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=27.7
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..+|||+|||.||+..|..|.+.. .| .+|.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~---~~-------~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK---PE-------WDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TT-------SEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC---cC-------CCEEEEECCC
Confidence 479999999999999999887641 12 3677787764
No 256
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=73.06 E-value=6.8 Score=35.20 Aligned_cols=57 Identities=14% Similarity=0.254 Sum_probs=33.7
Q ss_pred CcchhHH-HHHHHHHHHHHHhCCCCCCCCCceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 295 DIQGTAG-VALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 295 DiQGTaa-V~LAgli~Alr~~g~~l~dl~~~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
+.++.+. +.++..+.+++....--.. ++++|.| +|..|..+++++... |. +++.+|+
T Consensus 13 ~~~aa~~~~~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~ 71 (198)
T 1pqw_A 13 DNEAATFGVAYLTAWHSLCEVGRLSPG---ERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAG 71 (198)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTSCCCTT---CEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCCC---CEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeC
Confidence 3444433 3445555566433322234 7999999 488888887766543 42 6888876
No 257
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=72.97 E-value=2 Score=43.81 Aligned_cols=128 Identities=21% Similarity=0.257 Sum_probs=75.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||..|.++|..|+.. |+- ..+.|+|.+-=..++- -+|.+. ..|..... . ....+.+
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~-i---~~~~d~~- 83 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-----DLA-----DELALVDVIEDKLKGEMMDLQHG-SLFLKTPK-I---VSSKDYS- 83 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGCSCCE-E---EECSSGG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEeCChHHHHHHHHhhhhh-hhccCCCe-E---EEcCCHH-
Confidence 7999999999999999888652 442 4799999741000000 012221 12321110 0 0123444
Q ss_pred HhcccCCcEEEEecc---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccCC---cE
Q 009519 403 VVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGE---NI 465 (533)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~G---ra 465 (533)
++++ .|++|=+.+ .+|- +-+++++.|++ +++.-+|+-.|||.. +..+-+++.+ | +-
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~vlvvtNPvd---i~t~~~~k~s-g~p~~r 156 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVK-YSPQCKLLIVSNPVD---ILTYVAWKIS-GFPKNR 156 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHHH-CCCGGG
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecChHH---HHHHHHHHHh-CCCHHH
Confidence 5777 898873333 3332 22567777764 789999999999986 4555666655 3 34
Q ss_pred EEecCCCCc
Q 009519 466 VFASGSPFE 474 (533)
Q Consensus 466 i~AtGSPf~ 474 (533)
+|.+|.-.+
T Consensus 157 viG~gt~LD 165 (331)
T 4aj2_A 157 VIGSGCNLD 165 (331)
T ss_dssp EEECTTHHH
T ss_pred EEeeccccH
Confidence 777765443
No 258
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=72.95 E-value=2.1 Score=41.10 Aligned_cols=32 Identities=38% Similarity=0.593 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARS-----GF-------SVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCC
Confidence 6899999999999999888653 53 68899985
No 259
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=72.75 E-value=2.3 Score=42.65 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 38 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDA-----GV-------DVDVYERSP 38 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEecCC
Confidence 7899999999999999988753 54 577787653
No 260
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=72.74 E-value=2.5 Score=43.06 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=29.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|||+|||.||+..|..|.+... ..+ . -++.++|+..-
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~-~~~-----~-~~v~liE~~~~ 69 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQ-AQG-----A-LEVLFLDKQGD 69 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHH-HHC-----C-CCEEEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhccc-ccC-----c-ccEEEEecCCC
Confidence 479999999999999999987653 100 0 37899998753
No 261
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=72.58 E-value=6 Score=41.63 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|..+|..+.+. |. +++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G~-------~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----GA-------NVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----CC-------EEEEEECC
Confidence 5899999999999999988764 42 68888874
No 262
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=72.51 E-value=2.6 Score=35.21 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|..|..+|+.|.+. | .+++++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-----g-------~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-----G-------HDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 5899999999999999888653 4 368888873
No 263
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=72.46 E-value=2.1 Score=41.85 Aligned_cols=33 Identities=9% Similarity=0.183 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..+.+ .|+ ++.++|++.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 689999999999999988754 353 688999863
No 264
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=72.38 E-value=2.6 Score=41.40 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~-----~G~-------~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILAR-----KGY-------SVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeccC
Confidence 689999999999999998854 353 799999864
No 265
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=72.36 E-value=2.1 Score=42.03 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=28.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
..|+|+|||.+|+.+|..|.+. |. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999988753 53 69999987543
No 266
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=72.25 E-value=2.2 Score=42.93 Aligned_cols=34 Identities=35% Similarity=0.470 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 689999999999999998865 354 2378888754
No 267
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=71.84 E-value=2.4 Score=44.40 Aligned_cols=32 Identities=28% Similarity=0.432 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|.||+..|..|.+. |. ++.++|+.
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 7899999999999999998764 43 58889875
No 268
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=71.81 E-value=2 Score=41.92 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
..|+|+|||.+|+.+|..|.+. |. ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 5799999999999999988753 53 69999987543
No 269
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=71.76 E-value=2.3 Score=42.68 Aligned_cols=32 Identities=34% Similarity=0.545 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-+|+|+|||.||+..|..|.+. |. ++.+++++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~ 33 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGG 33 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecC
Confidence 3799999999999999988764 53 57777764
No 270
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=71.44 E-value=24 Score=37.84 Aligned_cols=148 Identities=22% Similarity=0.198 Sum_probs=89.9
Q ss_pred hCCCc-eeeeecCCCchHHHHHHHHhccCceeccCc---chhHHHHHHHHHHHHHHh---------CC----C--CCCCC
Q 009519 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL----S--LTDFA 322 (533)
Q Consensus 262 ~~P~~-~I~~EDf~~~~af~iL~ryr~~~~~FnDDi---QGTaaV~LAgli~Alr~~---------g~----~--l~dl~ 322 (533)
..|+. .|+.--.+..|- .+-.--+.-+.|.|--- ..+|=-+++.+++..|-. |+ + -.+|.
T Consensus 63 ~~~~Lk~i~~~~~G~d~i-d~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~ 141 (529)
T 1ygy_A 63 AAPKLKIVARAGVGLDNV-DVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIF 141 (529)
T ss_dssp TCTTCCEEEESSSCCTTB-CHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCT
T ss_pred hCCCCcEEEECCcCcCcc-CHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccC
Confidence 35776 777777776663 22221233477777543 334555788888877631 10 0 12344
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..++.|+|.|..|..+|+.+... |+ +++.+|+.- +..+ +... +. ...++.|
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~~---a~~~----g~-~~~~l~e 192 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF-----GA-------YVVAYDPYV---------SPAR---AAQL----GI-ELLSLDD 192 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTTS---------CHHH---HHHH----TC-EECCHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEECCCC---------ChhH---HHhc----Cc-EEcCHHH
Confidence 59999999999999999988653 43 688887631 1111 1110 00 1136889
Q ss_pred HhcccCCcEEEEec----cCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 403 ~V~~vkptvLIG~S----~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
+++. +|+++=.- ...+.++++.+..|. +..+|.=.|.
T Consensus 193 ~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~~k----~g~ilin~ar 233 (529)
T 1ygy_A 193 LLAR--ADFISVHLPKTPETAGLIDKEALAKTK----PGVIIVNAAR 233 (529)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTEEEEECSC
T ss_pred HHhc--CCEEEECCCCchHHHHHhCHHHHhCCC----CCCEEEECCC
Confidence 8887 88877432 224678877777772 5678887774
No 271
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=71.22 E-value=2.4 Score=43.00 Aligned_cols=129 Identities=16% Similarity=0.286 Sum_probs=75.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccC-CCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~-r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||..|..+|..|+.. |+- ..+.++|.+-=..++ .-+|.+. .+|....-. -..+-.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~-----i~~~~~~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVK-----TSYGTYE 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCE-----EEEECGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEecchHHHHHHHHHHHhc-cccccCCeE-----EEeCcHH
Confidence 6999999999999999988763 432 489999973100000 0013222 233211000 0111245
Q ss_pred HhcccCCcEEEEecc---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcccC--CcEE
Q 009519 403 VVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIV 466 (533)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~wt~--Grai 466 (533)
++++ +|++|=+.+ .+|- .-+++++.+.+ +++..+|+-.|||.. +..+-+++.+. -+-+
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~-~~p~a~vlvvtNPvd---~~t~~~~k~~g~p~~rv 143 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMA-SGFDGIFLVATNPVD---ILTYATWKFSGLPKERV 143 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGE
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCCeEEEEcCChHH---HHHHHHHHhcCCCHHHE
Confidence 6777 898763333 3342 12566777754 889999999999986 55566666542 1457
Q ss_pred EecCCCCc
Q 009519 467 FASGSPFE 474 (533)
Q Consensus 467 ~AtGSPf~ 474 (533)
|++|.-.+
T Consensus 144 iG~gt~LD 151 (326)
T 3pqe_A 144 IGSGTTLD 151 (326)
T ss_dssp EECTTHHH
T ss_pred EeeccccH
Confidence 77764443
No 272
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=71.14 E-value=2.3 Score=41.94 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.+|+.+|..|.+. .|. .++.++|+..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 6899999999999999998761 241 2699999875
No 273
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=70.95 E-value=1.9 Score=43.00 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 589999999999999988764 454 688898873
No 274
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=70.92 E-value=2.3 Score=42.43 Aligned_cols=33 Identities=12% Similarity=0.345 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 689999999999999998875 354 588888754
No 275
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=70.90 E-value=2.5 Score=41.92 Aligned_cols=35 Identities=26% Similarity=0.564 Sum_probs=28.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
..|+|+|||.+|+.+|..|.+. |. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~-----G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAER-----GH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999988753 54 69999987654
No 276
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=70.86 E-value=2.9 Score=42.46 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=29.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
.+|||+|||.||+..|..|.+. |.+ .+|.++|+..-+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~ 44 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAER 44 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSC
T ss_pred CcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCC
Confidence 6899999999999999998764 432 368999987643
No 277
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=70.75 E-value=4.6 Score=40.53 Aligned_cols=115 Identities=17% Similarity=0.236 Sum_probs=67.2
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCC-CCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r-~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||.|+|||..|..+|-+|..- |+- ..+.|+|..-=...+- -+|.+.. .+....... ...+-.++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i----~~~~d~~~ 66 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKI----VGGADYSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEE----EEESCGGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CCC-----CEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeE----ecCCCHHH
Confidence 799999999999999887652 432 4699999742111111 1233221 222111110 01112345
Q ss_pred hcccCCcEEEEeccC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHhcc
Q 009519 404 VRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (533)
Q Consensus 404 V~~vkptvLIG~S~~---~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~~w 460 (533)
+++ .|++|=+.+. ||- +-+++++.+++ ++++.||.-.|||.. .+..-+++.
T Consensus 67 ~~~--aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~-~~p~aivlvvsNPvd---~~t~i~~k~ 131 (294)
T 2x0j_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVE-NAPESKILVVTNPMD---VMTYIMWKE 131 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHT-TSTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCcch---hhHHhhHHH
Confidence 777 8998845443 442 12456666754 899999999999985 444455554
No 278
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=70.49 E-value=1.5 Score=46.55 Aligned_cols=32 Identities=13% Similarity=0.296 Sum_probs=25.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999999876632 22 279999985
No 279
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=70.48 E-value=2.7 Score=43.30 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 689999999999999987765 34 379999987
No 280
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=70.36 E-value=8.3 Score=37.80 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=33.8
Q ss_pred cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 296 IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 296 iQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.++...-.++..+.+.+..+.... ++++|.|||+.|...+.++.. .|. +.++.+|+
T Consensus 138 ~~aa~l~~~~~~~~~~~~~~~~~g----~~VlV~GaG~vG~~aiq~ak~-----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 138 EDGAFIEPITVGLHAFHLAQGCEN----KNVIIIGAGTIGLLAIQCAVA-----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCCTT----SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHhchHHHHHHHHHHHhccCCC----CEEEEECCCCcchHHHHHHHH-----cCC------cEEEEEec
Confidence 344433344445556666655544 599999999888766544433 343 46777765
No 281
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=70.34 E-value=2.9 Score=44.46 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=28.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|||+|||.||+..|..|.+. ..| .+|.++|+..-
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 72 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEY 72 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCC
Confidence 7999999999999999998764 113 37888888654
No 282
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=70.31 E-value=2.7 Score=39.28 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-+|+|+|||.||+..|..|.+. |+ ++.++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~-----g~-------~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQK-----GV-------RVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 6899999999999999888653 43 68888875
No 283
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=70.28 E-value=2.7 Score=43.85 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=28.6
Q ss_pred CceEEEeCchhHHHHHHHHHHH-HHHH-HcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQ-AAAR-MAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~-~~~~-~~Gls~~eA~~~i~lvD~~ 367 (533)
..+|+|+|||.||+..|..|.. .... ..| .+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4799999999999999999987 4210 002 378899886
No 284
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=70.18 E-value=4.3 Score=41.20 Aligned_cols=36 Identities=14% Similarity=0.357 Sum_probs=28.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCC
Confidence 589999999999999998865 3542 36999988653
No 285
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=70.14 E-value=2.7 Score=41.71 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 5799999999999999988764 54 578888754
No 286
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=69.96 E-value=1.5 Score=49.04 Aligned_cols=36 Identities=31% Similarity=0.500 Sum_probs=30.7
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 348999999999999999998876 44 6999999863
No 287
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=69.91 E-value=3 Score=41.56 Aligned_cols=34 Identities=35% Similarity=0.402 Sum_probs=26.0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
+|+|+|||.||+..|-.|.+. ..|+ ++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECCC
Confidence 699999999999999988764 0143 677787653
No 288
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=69.85 E-value=3.4 Score=41.52 Aligned_cols=23 Identities=22% Similarity=0.463 Sum_probs=21.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAA 346 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~ 346 (533)
.+|+|+|||.+|+..|..|.+..
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G 28 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEI 28 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHhc
Confidence 68999999999999999998875
No 289
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=69.63 E-value=2.2 Score=42.37 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=62.8
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc---cccCCCCCChhhhccccccCCcCCccCCCC
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL---ITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL---i~~~r~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
.||+|.|| |..|..++..|+. .|.-...-...++++|...- ......++.+...+|..+- ....+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di------~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGL------EATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE------EEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCe------EeccC
Confidence 58999997 9999999888764 24310000126999997420 0000001111001221111 12256
Q ss_pred HHHHhcccCCcEEEEeccCCCC--------------CCHHHHHHhhhcCC-CCCeEEecCCCC
Q 009519 400 LLEVVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDS-VKPAIFAMSNPT 447 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~--------------Fteevv~~Ma~~~~-erPIIFaLSNPt 447 (533)
+.+++++ +|++|=+.+.+.. .|.++++++.+ ++ .+.+++-.|||.
T Consensus 74 ~~~a~~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~-~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 74 PKVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE-VAKKDVKVLVVGNPA 133 (327)
T ss_dssp HHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSH
T ss_pred hHHHhCC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEeCCch
Confidence 8899987 8999866554421 35667788854 54 555778899996
No 290
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=69.63 E-value=3.9 Score=39.95 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.|+|+|||.+|+.+|-.|.+... +. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~-----~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYH-----SV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHT-----TT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhcc-----cc-CCCceEEEEECCC
Confidence 58999999999999998876530 00 0003799999873
No 291
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=69.44 E-value=4 Score=41.25 Aligned_cols=35 Identities=23% Similarity=0.449 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 44 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREP 44 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSS
T ss_pred CcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCC
Confidence 689999999999999999865 3543 3688888854
No 292
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=69.38 E-value=2.8 Score=43.52 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|||+|||.||...|-.|.+... .|+ +|.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999999987431 343 6889988643
No 293
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=69.24 E-value=2.1 Score=41.10 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.+|+|+|||.||+..|..|.+. |. ++.++|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 6899999999999999988653 43 5788887
No 294
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=69.20 E-value=2.8 Score=42.92 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|-.|.+. |+ ++.++|++-
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCCC
Confidence 4899999999999999888764 54 788898753
No 295
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=68.63 E-value=2.9 Score=39.73 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999998765 353 168899985
No 296
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=68.56 E-value=3 Score=45.39 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=28.2
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~ 55 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERS 55 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCC
Confidence 34899999999999999988865 354 68899987
No 297
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=68.53 E-value=4 Score=42.55 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=28.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..+.+... . ..++.++|+..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~--~-------~~~V~lie~~~ 71 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYG--D-------ANEIVVFDQNS 71 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHG--G-------GSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCC--C-------CCeEEEEECCC
Confidence 689999999999999999987530 0 14788998764
No 298
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=68.22 E-value=2.7 Score=43.75 Aligned_cols=38 Identities=24% Similarity=0.462 Sum_probs=28.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+.. ..|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 58999999999999999988732 146521 138899886
No 299
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=68.17 E-value=3.1 Score=41.94 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=29.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 579999999999999988865 354 279999987653
No 300
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=68.15 E-value=3.5 Score=41.61 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.+|+.+|..|.+. .-|+ ++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~---~pG~-------~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQL---APGR-------SLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhc---CCCC-------eEEEEeCCC
Confidence 5799999999999999988763 0143 689999863
No 301
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=67.95 E-value=4 Score=42.10 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=53.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcccccc-CCc----CCccCCC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDF----MGLREGA 398 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~-~~~----~~~~~~~ 398 (533)
.||+|+|||-.|..+|+.|.+ .|- .-.+++++|++- + .+......+.... ... -...+..
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~~----~--~~~~la~~l~~~~~~~~~~~~~D~~d~~ 66 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRTL----S--KCQEIAQSIKAKGYGEIDITTVDADSIE 66 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESCH----H--HHHHHHHHHHHTTCCCCEEEECCTTCHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECCH----H--HHHHHHHHhhhhcCCceEEEEecCCCHH
Confidence 489999998777666666543 231 003688888731 1 1111111111100 000 0001234
Q ss_pred CHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
++.++++..++|++|=+++ -.+..+++++..+ ....+| -+|+
T Consensus 67 ~l~~~l~~~~~DvVin~ag--~~~~~~v~~a~l~--~g~~vv-D~a~ 108 (405)
T 4ina_A 67 ELVALINEVKPQIVLNIAL--PYQDLTIMEACLR--TGVPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHCCSEEEECSC--GGGHHHHHHHHHH--HTCCEE-ESSC
T ss_pred HHHHHHHhhCCCEEEECCC--cccChHHHHHHHH--hCCCEE-EecC
Confidence 6888999889999997654 2235566665533 234444 2544
No 302
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=67.91 E-value=3.2 Score=42.61 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=27.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+. ..| .+|.++|+.-
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCC
Confidence 5899999999999999998764 113 3788888764
No 303
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=67.73 E-value=3 Score=44.66 Aligned_cols=33 Identities=30% Similarity=0.377 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 789999999999999999865 354 589999874
No 304
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=67.67 E-value=1.7 Score=47.12 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=29.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.||+|+|+|..|.-||+.|+.+++ ++|.++|.+=
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGV-----------g~itlvD~D~ 66 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGI-----------GSFTIIDGNQ 66 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-----------SEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC-----------CeEEEEeCCE
Confidence 899999999999999999987644 6999999763
No 305
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=67.45 E-value=3.3 Score=41.31 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=25.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G~-------~V~vlE~~ 32 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----GH-------EVEVFERL 32 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----CC-------ceEEEeCC
Confidence 699999999999999988763 43 67777775
No 306
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.42 E-value=3.7 Score=42.18 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~ 38 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKR 38 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5799999999999999887654 43 78999986
No 307
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=67.37 E-value=3.1 Score=43.22 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~~ 58 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQL-----GM-------KVAVVEKRS 58 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 5799999999999999888653 53 699999754
No 308
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=67.31 E-value=5.5 Score=40.58 Aligned_cols=91 Identities=16% Similarity=0.247 Sum_probs=53.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..|... | .+|+.+|++ +.+...+... +.....++.|+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~-----------~~~~~~a~~~----G~~~~~~~~e~ 61 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRS-----------RSGAKSAVDE----GFDVSADLEAT 61 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSC-----------HHHHHHHHHT----TCCEESCHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCC-----------HHHHHHHHHc----CCeeeCCHHHH
Confidence 4899999999999999988754 4 268888763 1111122211 00112467777
Q ss_pred hccc--CCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 009519 404 VRKV--KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 404 V~~v--kptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
++.. .+|++| ++. |-..++++++.++. +.+.-||.=.+
T Consensus 62 ~~~a~~~aDlVi-lav-P~~~~~~vl~~l~~-~~~~~iv~Dv~ 101 (341)
T 3ktd_A 62 LQRAAAEDALIV-LAV-PMTAIDSLLDAVHT-HAPNNGFTDVV 101 (341)
T ss_dssp HHHHHHTTCEEE-ECS-CHHHHHHHHHHHHH-HCTTCCEEECC
T ss_pred HHhcccCCCEEE-EeC-CHHHHHHHHHHHHc-cCCCCEEEEcC
Confidence 6642 367766 443 32346677777754 34444554444
No 309
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=67.26 E-value=2 Score=43.78 Aligned_cols=35 Identities=26% Similarity=0.501 Sum_probs=27.4
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
+-||||+|||.||+..|..|. ..| .+|.++|+.--
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~ 43 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKY 43 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSS
T ss_pred CCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCC
Confidence 369999999999999999981 223 37888887643
No 310
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=67.26 E-value=3.5 Score=40.93 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhh
Q 009519 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA 382 (533)
Q Consensus 303 ~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~ 382 (533)
.++..+.|++..+.+.. ++|+|+|||+.|...+.+... .|. ++|+.+|+. +.+.
T Consensus 151 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~~-----------~~~~ 204 (352)
T 3fpc_A 151 MMTTGFHGAELANIKLG----DTVCVIGIGPVGLMSVAGANH-----LGA------GRIFAVGSR-----------KHCC 204 (352)
T ss_dssp HHHHHHHHHHHTTCCTT----CCEEEECCSHHHHHHHHHHHT-----TTC------SSEEEECCC-----------HHHH
T ss_pred hhHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------cEEEEECCC-----------HHHH
Confidence 44455666766665544 599999999777766554432 353 478888762 3333
Q ss_pred ccccccC--C-cCCccCCCCHHHHhcc----cCCcEEEEeccCCCCCCHHHHHHhh
Q 009519 383 PFAKDPG--D-FMGLREGASLLEVVRK----VKPHVLLGLSGVGGVFNEEVLKAMR 431 (533)
Q Consensus 383 ~~A~~~~--~-~~~~~~~~~L~e~V~~----vkptvLIG~S~~~g~Fteevv~~Ma 431 (533)
.+++.-. . +. ....++.+.++. -+.|++|=+++.+ ...++.++.++
T Consensus 205 ~~~~~lGa~~vi~--~~~~~~~~~v~~~t~g~g~D~v~d~~g~~-~~~~~~~~~l~ 257 (352)
T 3fpc_A 205 DIALEYGATDIIN--YKNGDIVEQILKATDGKGVDKVVIAGGDV-HTFAQAVKMIK 257 (352)
T ss_dssp HHHHHHTCCEEEC--GGGSCHHHHHHHHTTTCCEEEEEECSSCT-THHHHHHHHEE
T ss_pred HHHHHhCCceEEc--CCCcCHHHHHHHHcCCCCCCEEEECCCCh-HHHHHHHHHHh
Confidence 4443210 0 00 011334444433 3578888665422 33456666663
No 311
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=67.22 E-value=3.1 Score=39.83 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=24.6
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-|+|+|||+||+..|..+.+ .|+ ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 57999999999999977654 354 68888874
No 312
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=67.12 E-value=2.2 Score=40.65 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. ++.++|+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 37 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARA-----NL-------QPVLITGM 37 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-----TC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEccC
Confidence 6899999999999999888653 43 57778853
No 313
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=67.12 E-value=3.4 Score=41.57 Aligned_cols=31 Identities=35% Similarity=0.565 Sum_probs=25.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+|+|+|||.+|+..|..|.+. |. ++.++|+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G~-------~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----GH-------EIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 799999999999999988763 43 57777765
No 314
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=66.99 E-value=2.8 Score=40.68 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 6899999999999999988653 54 57788853
No 315
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=66.96 E-value=5 Score=39.66 Aligned_cols=105 Identities=25% Similarity=0.321 Sum_probs=55.7
Q ss_pred chhHHHHHHHHHHHHH-HhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCC
Q 009519 297 QGTAGVALAGLLGTVR-AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERK 375 (533)
Q Consensus 297 QGTaaV~LAgli~Alr-~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~ 375 (533)
++.....++.-+.+++ ..+. .. ++|+|+|||..|...+.+... .|. ++++.+|+.
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~-------- 198 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV--SG---KSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN-------- 198 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC--TT---SCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC--------
T ss_pred HHHhhhHHHHHHHHHHHhCCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC--------
Confidence 3433334444456666 4433 55 799999998888777665543 343 368887752
Q ss_pred CCChhhhcccccc-CC-cCCccCCCCHHHHhcc---cCCcEEEEeccCCCCCCHHHHHHhh
Q 009519 376 NLDPAAAPFAKDP-GD-FMGLREGASLLEVVRK---VKPHVLLGLSGVGGVFNEEVLKAMR 431 (533)
Q Consensus 376 ~l~~~k~~~A~~~-~~-~~~~~~~~~L~e~V~~---vkptvLIG~S~~~g~Fteevv~~Ma 431 (533)
+.+..+++.- .. .. ....++.+.++. -+.|++|=.++. ....++.++.|+
T Consensus 199 ---~~~~~~~~~la~~v~~--~~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~~l~ 253 (343)
T 2dq4_A 199 ---PYRLAFARPYADRLVN--PLEEDLLEVVRRVTGSGVEVLLEFSGN-EAAIHQGLMALI 253 (343)
T ss_dssp ---HHHHGGGTTTCSEEEC--TTTSCHHHHHHHHHSSCEEEEEECSCC-HHHHHHHHHHEE
T ss_pred ---HHHHHHHHHhHHhccC--cCccCHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHHHh
Confidence 1222222211 00 00 011346666653 257999877652 133456666663
No 316
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=66.82 E-value=4.7 Score=39.31 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.-|+|+|||+||+..|..|.+. +.|+ ++.++|+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 6799999999999999988754 3465 68888875
No 317
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=66.65 E-value=7.2 Score=38.68 Aligned_cols=55 Identities=24% Similarity=0.280 Sum_probs=33.6
Q ss_pred cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 296 IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 296 iQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.++.....++..+.|++..+.+.. ++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 146 ~~aa~~~~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 146 EEGALLEPLSVGVHACRRAGVQLG----TTVLVIGAGPIGLVSVLAAKA-----YGA-------FVVCTAR 200 (352)
T ss_dssp HHHHTHHHHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHhhchHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEcC
Confidence 344333344555666766655443 599999998777766655443 342 4787775
No 318
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=66.46 E-value=3.6 Score=43.25 Aligned_cols=36 Identities=14% Similarity=0.351 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.||||+|||.||+..|..|.+.. .| -+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~---~~-------~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS---ET-------AEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCC
Confidence 48999999999999999887641 12 37888988743
No 319
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=66.41 E-value=5 Score=41.40 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.7
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
||||+|||.||+..|..+.+. |.+ -+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~~-----~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DKE-----SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CSS-----SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 799999999999999888653 432 3688998753
No 320
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=66.39 E-value=3.7 Score=42.80 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..+.+.- ..|. ++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G~-------~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PETT-------QVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTTE-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCcC-------EEEEEeCCC
Confidence 57999999999999999887640 0032 799999873
No 321
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=66.34 E-value=3.4 Score=42.06 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+. ..| -+|.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~---~~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL---MPD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH---CTT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC---CCC-------CeEEEECCCC
Confidence 5899999999999999998762 123 3788888754
No 322
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=66.31 E-value=3.5 Score=43.80 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=29.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|||+|||.||...|..|.+... .|+ +|.++|+.-.
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~~ 62 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQ--GTA-------DITLLQAPDI 62 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTT--TSS-------EEEEEECCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcC--CCC-------cEEEEeCCCC
Confidence 689999999999999999887421 343 7999998643
No 323
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=66.08 E-value=4 Score=44.78 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+. |. ++.++|+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 6899999999999999998764 43 699999863
No 324
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=65.76 E-value=3.6 Score=42.60 Aligned_cols=32 Identities=28% Similarity=0.568 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAA-----FGK-------RVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEcCC
Confidence 689999999999999998865 343 69999986
No 325
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=65.76 E-value=2.6 Score=41.72 Aligned_cols=31 Identities=23% Similarity=0.550 Sum_probs=24.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
+||-|+|-|..|.++|..|++. |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5999999999999999999864 53 5777776
No 326
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=65.65 E-value=4.1 Score=42.49 Aligned_cols=26 Identities=19% Similarity=0.497 Sum_probs=21.8
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHH
Q 009519 320 DFADQKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~ 345 (533)
+++.+||+|+|.|.+|+++|++|.+.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~ 31 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKL 31 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhC
Confidence 34459999999999999999888764
No 327
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=65.61 E-value=4.2 Score=41.68 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.5
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987641 13 3799999864
No 328
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=65.57 E-value=3.5 Score=43.52 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 76 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAM-----GG-------RQLIVDRWP 76 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 6899999999999999988753 43 699999875
No 329
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.42 E-value=4.1 Score=39.04 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=24.3
Q ss_pred CCCCceEEEeCch-h--HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 320 DFADQKIVVVGAG-S--AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 320 dl~~~riv~~GAG-s--Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
+|+..+++|.||. . .|.+||+.|++ +|. +++++|++-
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~ 62 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQ 62 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCch
Confidence 3444899999973 3 55556666554 453 688888853
No 330
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=65.34 E-value=4.4 Score=41.49 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=27.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGD 35 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCC
Confidence 6999999999999999987641 13 3789998864
No 331
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=65.30 E-value=4.8 Score=41.04 Aligned_cols=35 Identities=29% Similarity=0.407 Sum_probs=27.5
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..+|+|+|||-+|+..|..|.+. |- ..++.++++.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~ 38 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAG 38 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECC
Confidence 37899999999999999998775 31 0367888875
No 332
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.23 E-value=4.1 Score=42.33 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 57999999999999999887641 13 37889988643
No 333
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=65.18 E-value=3 Score=42.96 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999987765 353 68999986
No 334
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=65.13 E-value=3.3 Score=44.47 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999998865 353 689999864
No 335
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=65.11 E-value=8.1 Score=38.91 Aligned_cols=124 Identities=22% Similarity=0.336 Sum_probs=72.0
Q ss_pred eEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCC--cCCccCCCCHH
Q 009519 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGD--FMGLREGASLL 401 (533)
Q Consensus 325 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~--~~~~~~~~~L~ 401 (533)
||.|+| +|..|..+|.+|..- .++- ..+.++|..-. ..+ ....+.+-... ..+. ...+..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~~-----~el~L~Di~~~-~~G------~a~Dl~~~~~~~~v~~~-~~~~~~ 64 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPSG-----SELSLYDIAPV-TPG------VAVDLSHIPTAVKIKGF-SGEDAT 64 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCTT-----EEEEEECSSTT-HHH------HHHHHHTSCSSEEEEEE-CSSCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCCC-----ceEEEEecCCC-chh------HHHHhhCCCCCceEEEe-cCCCcH
Confidence 899999 799999999877542 2332 47999998641 111 11112111000 0000 012467
Q ss_pred HHhcccCCcEEEEeccC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHH--HHhccc---C
Q 009519 402 EVVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAA--DAFKHA---G 462 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~---~g~-----------Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe--~A~~wt---~ 462 (533)
++.++ .|++|=+.+. +|- +-+++++.+.+ ++++-+|+-.|||.. -.++- ++++.+ .
T Consensus 65 ~~~~~--aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~-~~p~a~vlvvtNPvd--~~t~~a~~~~k~sg~~p 139 (312)
T 3hhp_A 65 PALEG--ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAK-TCPKACIGIITNPVN--TTVAIAAEVLKKAGVYD 139 (312)
T ss_dssp HHHTT--CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH--HHHHHHHHHHHHTTCCC
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEecCcch--hHHHHHHHHHHHcCCCC
Confidence 88888 8998855443 332 22456666654 788889999999985 22222 244443 2
Q ss_pred CcEEEecC
Q 009519 463 ENIVFASG 470 (533)
Q Consensus 463 Grai~AtG 470 (533)
-+-+|++|
T Consensus 140 ~~rv~G~~ 147 (312)
T 3hhp_A 140 KNKLFGVT 147 (312)
T ss_dssp TTSEEECC
T ss_pred cceEEEEe
Confidence 34577777
No 336
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=65.04 E-value=3.5 Score=43.17 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
-.|+|+|||.+|+++|..+.+ .|+ ++.++|+..
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 679999999999999998875 354 588999864
No 337
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=64.98 E-value=4.8 Score=39.92 Aligned_cols=99 Identities=23% Similarity=0.283 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhh
Q 009519 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA 382 (533)
Q Consensus 303 ~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~ 382 (533)
.++..+.|++..+. .. ++|+|+|||..|..++++... .|. ++++.+|+. +.+.
T Consensus 153 ~~~ta~~~l~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~-----------~~~~ 205 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SG---KSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS-----------DFRR 205 (348)
T ss_dssp HHHHHHHHHTTSCC--TT---CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC-----------HHHH
T ss_pred HHHHHHHHHHhcCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC-----------HHHH
Confidence 34444556643333 55 899999999888877766543 343 368877652 2233
Q ss_pred ccccccC-C--cCCccCCCCHHHHhcc----cCCcEEEEeccCCCCCCHHHHHHhh
Q 009519 383 PFAKDPG-D--FMGLREGASLLEVVRK----VKPHVLLGLSGVGGVFNEEVLKAMR 431 (533)
Q Consensus 383 ~~A~~~~-~--~~~~~~~~~L~e~V~~----vkptvLIG~S~~~g~Fteevv~~Ma 431 (533)
.+++.-. + .. ....++.+.++. -..|++|=.++. ....++.++.|+
T Consensus 206 ~~~~~~Ga~~~~~--~~~~~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~~l~ 258 (348)
T 2d8a_A 206 ELAKKVGADYVIN--PFEEDVVKEVMDITDGNGVDVFLEFSGA-PKALEQGLQAVT 258 (348)
T ss_dssp HHHHHHTCSEEEC--TTTSCHHHHHHHHTTTSCEEEEEECSCC-HHHHHHHHHHEE
T ss_pred HHHHHhCCCEEEC--CCCcCHHHHHHHHcCCCCCCEEEECCCC-HHHHHHHHHHHh
Confidence 3333100 0 00 011345555543 257888876652 133455666663
No 338
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=64.89 E-value=3.3 Score=42.86 Aligned_cols=34 Identities=29% Similarity=0.537 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 28 ~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 589999999999999988765 353 6889998653
No 339
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=64.85 E-value=11 Score=38.91 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=25.6
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
||.|+|+|..|..+|..+.+. |. +++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G~-------~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----GH-------EVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988753 42 68888874
No 340
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=64.81 E-value=3.2 Score=42.95 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..+.+ .|. ++.++|+.-
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~-----~g~-------~V~lie~~~ 39 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQ-----LGL-------KVLAVEAGE 39 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999998854 343 799999863
No 341
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=64.81 E-value=3.6 Score=43.40 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=28.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|-.|.+... .|+ +|.++|+.-
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 689999999999999998876310 353 799999854
No 342
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=64.81 E-value=3.7 Score=42.16 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
-+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----GM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 4799999999999999877653 43 799999873
No 343
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=64.64 E-value=2.5 Score=41.31 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.+|+.+|..|.+.. ..|+ ++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 47999999999999999886510 1343 68888875
No 344
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=64.64 E-value=12 Score=36.17 Aligned_cols=95 Identities=19% Similarity=0.216 Sum_probs=55.8
Q ss_pred CCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCC
Q 009519 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (533)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~ 399 (533)
++..+|+|.|| |-.|..+++.|++ .|. +++.+|+.. ...++ .+..-+ + .+..+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~~~~-----~~~~~D--l---~d~~~ 70 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SGTGG-----EEVVGS--L---EDGQA 70 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CSSCC-----SEEESC--T---TCHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CCCCc-----cEEecC--c---CCHHH
Confidence 34489999998 8888888888775 342 688887742 11111 121110 0 12345
Q ss_pred HHHHhcccCCcEEEEeccCCCCC--------------CHHHHHHhhhcCCCCCeEEecC
Q 009519 400 LLEVVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~F--------------teevv~~Ma~~~~erPIIFaLS 444 (533)
+.+++++ +|++|=+.+....- |..+++++.+ ..-+.|||.=|
T Consensus 71 ~~~~~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS 126 (347)
T 4id9_A 71 LSDAIMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASS 126 (347)
T ss_dssp HHHHHTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECC
Confidence 7888885 99999776543211 2457788754 45567888555
No 345
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=64.51 E-value=3.8 Score=42.17 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~lie~~~ 35 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQL-----GM-------KTACVEKRG 35 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 6899999999999999877653 53 699999873
No 346
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=64.48 E-value=3.7 Score=42.33 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 5799999999999999888653 43 699999874
No 347
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=64.36 E-value=3.5 Score=42.80 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=27.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|++-
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 44 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASY-----GA-------KTLLVEAKA 44 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----SC-------CEEEEESSC
T ss_pred CCEEEEcCCHHHHHHHHHHHHC-----CC-------cEEEEeCCC
Confidence 6899999999999999988753 43 699999863
No 348
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=64.34 E-value=3.3 Score=39.28 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=24.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+ .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 579999999999999988765 343 56677653
No 349
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=64.28 E-value=3.7 Score=41.99 Aligned_cols=36 Identities=22% Similarity=0.466 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+.+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999987321 23 3677777654
No 350
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=64.20 E-value=3.7 Score=48.00 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=30.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||+|+|+|..|.-||+.|+.+++ ++|.++|.+
T Consensus 28 s~VlIvG~GGlGseiak~La~aGV-----------g~itlvD~D 60 (1015)
T 3cmm_A 28 SNVLILGLKGLGVEIAKNVVLAGV-----------KSMTVFDPE 60 (1015)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC-----------SEEEEECCS
T ss_pred CEEEEECCChHHHHHHHHHHHcCC-----------CeEEEecCC
Confidence 899999999999999999998755 699999986
No 351
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=64.11 E-value=6 Score=41.44 Aligned_cols=35 Identities=14% Similarity=0.388 Sum_probs=28.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+. ..| .+|.++|+..
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~---~~g-------~~V~lie~~~ 46 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRAR---DPG-------ARVLIVSEDP 46 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHH---STT-------CEEEEEESSS
T ss_pred CCEEEECChHHHHHHHHHHHhc---CCC-------CeEEEEeCCC
Confidence 6899999999999999988654 112 4799999864
No 352
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=64.10 E-value=4.3 Score=42.76 Aligned_cols=34 Identities=32% Similarity=0.414 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..-
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 689999999999999988865 353 6889988643
No 353
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=63.95 E-value=3.6 Score=42.25 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQL-----GQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5799999999999999887653 43 79999986
No 354
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=62.65 E-value=5.1 Score=41.01 Aligned_cols=35 Identities=29% Similarity=0.533 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|.. .++.++|++.
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 689999999999999998875 3542 2789999863
No 355
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=62.62 E-value=3.6 Score=42.37 Aligned_cols=32 Identities=25% Similarity=0.500 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 689999999999999988865 34 379999986
No 356
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=62.43 E-value=14 Score=36.79 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=24.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
++|+|.|||..|..++.++... |. +++.+|+.
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~-----Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTY-----GL-------EVWMANRR 213 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 8999999988888777766543 42 68888763
No 357
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=62.33 E-value=4.2 Score=43.12 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=27.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 6899999999999999988753 54 688898864
No 358
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.25 E-value=4.2 Score=42.55 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999988653 4 3699999863
No 359
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=62.22 E-value=4.7 Score=41.56 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..+.+. |+ ++.++|+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 38 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQL-----GF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 5799999999999999988653 53 799999853
No 360
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=62.15 E-value=3.5 Score=39.14 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=24.2
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.|+|+|||+||+..|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999999876654 454 57788864
No 361
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=61.70 E-value=3.9 Score=42.93 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
..|+|+|||.||+..|..|.+ .|+ ++.++|++--
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~~ 39 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRPG 39 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 689999999999999988865 354 5888888643
No 362
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=61.68 E-value=4.6 Score=41.74 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
-.|+|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~ 37 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKG 37 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTS
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCC
Confidence 579999999999999988865 353 699999655
No 363
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=61.43 E-value=5.1 Score=36.43 Aligned_cols=96 Identities=14% Similarity=0.187 Sum_probs=56.3
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChh-----hhccccccCCcCCccCC
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA-----AAPFAKDPGDFMGLREG 397 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~-----k~~~A~~~~~~~~~~~~ 397 (533)
++|+|.|| |-.|..+++.|++ +.|. ++++++++.- ..+... +..+..- + ..+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~----~~g~-------~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~--D---~~d~ 64 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT----YTDM-------HITLYGRQLK-----TRIPPEIIDHERVTVIEG--S---FQNP 64 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH----HCCC-------EEEEEESSHH-----HHSCHHHHTSTTEEEEEC--C---TTCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh----cCCc-------eEEEEecCcc-----ccchhhccCCCceEEEEC--C---CCCH
Confidence 45999996 8888888888873 2453 6888877411 011111 1111110 0 0123
Q ss_pred CCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEec
Q 009519 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM 443 (533)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaL 443 (533)
.++.++++. +|++|=..+..+.-++.+++.|.+ ..-+-|||.=
T Consensus 65 ~~~~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~-~~~~~iv~iS 107 (221)
T 3r6d_A 65 GXLEQAVTN--AEVVFVGAMESGSDMASIVKALSR-XNIRRVIGVS 107 (221)
T ss_dssp HHHHHHHTT--CSEEEESCCCCHHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred HHHHHHHcC--CCEEEEcCCCCChhHHHHHHHHHh-cCCCeEEEEe
Confidence 467888876 899997665332227888999964 4445677743
No 364
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=61.18 E-value=12 Score=37.53 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=61.2
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcc
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~ 384 (533)
...+.+++..+..... ++|+|.|||..|..++.++.. .|. +++.+|+. .++ +...++.+
T Consensus 173 ~ta~~al~~~~~~~~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~----~~~--~~~~~~~l 231 (366)
T 1yqd_A 173 ITVYSPLKYFGLDEPG---KHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVISTS----PSK--KEEALKNF 231 (366)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----GGG--HHHHHHTS
T ss_pred HHHHHHHHhcCcCCCC---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH--HHHHHHhc
Confidence 3345667666654345 799999999888777765543 342 67877752 111 11111111
Q ss_pred -ccccCCcCCccCCCCHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccCCHHHHh
Q 009519 385 -AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAF 458 (533)
Q Consensus 385 -A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe~A~ 458 (533)
|... ... .+...+.++.. ++|++|=+++. ....++.++.|+. .=-|.-++.+....+..+...+
T Consensus 232 Ga~~v--~~~-~~~~~~~~~~~--~~D~vid~~g~-~~~~~~~~~~l~~----~G~iv~~g~~~~~~~~~~~~~~ 296 (366)
T 1yqd_A 232 GADSF--LVS-RDQEQMQAAAG--TLDGIIDTVSA-VHPLLPLFGLLKS----HGKLILVGAPEKPLELPAFSLI 296 (366)
T ss_dssp CCSEE--EET-TCHHHHHHTTT--CEEEEEECCSS-CCCSHHHHHHEEE----EEEEEECCCCSSCEEECHHHHH
T ss_pred CCceE--Eec-cCHHHHHHhhC--CCCEEEECCCc-HHHHHHHHHHHhc----CCEEEEEccCCCCCCcCHHHHH
Confidence 1000 000 00011333332 47888877653 3345778888842 2233335544433345554443
No 365
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.08 E-value=4.6 Score=41.69 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 5799999999999999877653 4 379999983
No 366
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=61.04 E-value=26 Score=34.57 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=52.1
Q ss_pred CceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHH
Q 009519 323 DQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (533)
Q Consensus 323 ~~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~ 401 (533)
..||+++| .|-.|..+++++... .++ +=+..+|+++--..++ ++. +++.-.. +.+...++.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~----~~~------eLv~~~d~~~~~~~G~-d~g----el~g~~~---gv~v~~dl~ 68 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA----PDA------TLVGALDRTGSPQLGQ-DAG----AFLGKQT---GVALTDDIE 68 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC----TTE------EEEEEBCCTTCTTTTS-BTT----TTTTCCC---SCBCBCCHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC----CCC------EEEEEEEecCcccccc-cHH----HHhCCCC---CceecCCHH
Confidence 37999999 799999999888652 232 2244567653211111 111 1111000 112346788
Q ss_pred HHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEE
Q 009519 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIF 441 (533)
++++. |||+|=+|. |.+. .+.++...+ +..|+|.
T Consensus 69 ~ll~~--~DVVIDfT~-p~a~-~~~~~~al~--~G~~vVi 102 (272)
T 4f3y_A 69 RVCAE--ADYLIDFTL-PEGT-LVHLDAALR--HDVKLVI 102 (272)
T ss_dssp HHHHH--CSEEEECSC-HHHH-HHHHHHHHH--HTCEEEE
T ss_pred HHhcC--CCEEEEcCC-HHHH-HHHHHHHHH--cCCCEEE
Confidence 88875 999997774 3333 344444433 3556665
No 367
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=61.02 E-value=4.9 Score=42.30 Aligned_cols=32 Identities=31% Similarity=0.461 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.+|+..|-.|.+ .|+ ++.++|++
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 789999999999999998875 354 57777765
No 368
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=60.95 E-value=5.3 Score=41.44 Aligned_cols=32 Identities=22% Similarity=0.464 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..|+|+|||.||+..|..+.+. |. ++.++|++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 58 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGAL-----GK-------RVAIAEEY 58 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----cC-------EEEEEeCC
Confidence 6899999999999999888653 53 68999984
No 369
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=60.89 E-value=5.1 Score=41.06 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~ 39 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDAT 39 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCC
T ss_pred CcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCC
Confidence 689999999999999998865 3542 3788998764
No 370
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=60.50 E-value=3.1 Score=40.42 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=27.2
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
+..|+|+|||.+|+.+|..|.+ |. ++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La~------G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLSA------HG-------RVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT------TS-------CEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHhC------CC-------CEEEEECCC
Confidence 3689999999999999988862 43 689999874
No 371
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=60.50 E-value=5 Score=41.39 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 7999999999999999998764 53 68888876
No 372
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=60.40 E-value=4.8 Score=42.32 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=29.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHH-------HcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAAR-------MAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~-------~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||...|-.|.+.... ..|+ +|.++++.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 6899999999999999998874310 0354 688999864
No 373
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=60.35 E-value=4 Score=42.58 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=20.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (533)
.+|+|+|||.||+..|..|.+.
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhc
Confidence 6899999999999999998864
No 374
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=60.34 E-value=5.1 Score=41.57 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
-+|+|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 579999999999999987755 353 699999843
No 375
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=60.33 E-value=6.8 Score=39.28 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=53.2
Q ss_pred CCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCC
Q 009519 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~ 398 (533)
.++...||.|+|+|..|...++.+... ..|. +-+.++|++ .+.. +.+++.-.. ......
T Consensus 19 ~~m~~~rvgiIG~G~~g~~~~~~l~~~---~~~~------~lvav~d~~------~~~~----~~~a~~~g~--~~~~~~ 77 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGSDHLRRLANT---VSGV------EVVAVCDIV------AGRA----QAALDKYAI--EAKDYN 77 (357)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHT---CTTE------EEEEEECSS------TTHH----HHHHHHHTC--CCEEES
T ss_pred cCCCeeeEEEECCcHHHHHHHHHHHhh---CCCc------EEEEEEeCC------HHHH----HHHHHHhCC--CCeeeC
Confidence 344458999999999887666655421 1121 223466652 1111 223322110 001347
Q ss_pred CHHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEE
Q 009519 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIF 441 (533)
++.|+++.-++|+++ +++ |..+..++++...+ ...+|+.
T Consensus 78 ~~~~ll~~~~~D~V~-i~t-p~~~h~~~~~~al~--aGk~Vl~ 116 (357)
T 3ec7_A 78 DYHDLINDKDVEVVI-ITA-SNEAHADVAVAALN--ANKYVFC 116 (357)
T ss_dssp SHHHHHHCTTCCEEE-ECS-CGGGHHHHHHHHHH--TTCEEEE
T ss_pred CHHHHhcCCCCCEEE-EcC-CcHHHHHHHHHHHH--CCCCEEe
Confidence 899999987789988 554 55566666665533 3456554
No 376
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=60.27 E-value=6.6 Score=41.96 Aligned_cols=34 Identities=32% Similarity=0.531 Sum_probs=21.3
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
...+++|.|||.+|.++|..+.+ .|. +|+++++.
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 33899999998666666666554 352 57888763
No 377
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=60.12 E-value=4 Score=43.67 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+ +.|+ ++.++|+..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 689999999999999998872 2354 689999864
No 378
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=59.87 E-value=6 Score=40.75 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-.|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 35 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL-----GL-------KTALIEKY 35 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 5799999999999999988764 43 68999986
No 379
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=59.79 E-value=5.4 Score=42.03 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.+|+..|-.|.+. |+ ++.++|++
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 43 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLA-----GV-------EVVVLERL 43 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 7899999999999999988753 54 57777765
No 380
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=59.68 E-value=5.2 Score=44.32 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+. |. ++.++|+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~~-----G~-------~Vtlie~~~ 422 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLMES-----GY-------TVHLTDTAE 422 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 6899999999999999988753 43 688998853
No 381
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=59.60 E-value=4.7 Score=37.70 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=24.4
Q ss_pred CCCCceEEEeCch---hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 320 DFADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 320 dl~~~riv~~GAG---sAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+++..++||.||+ ..|.++|+.|++ +|. +++++|++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVG 49 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecc
Confidence 3445999999984 455556666654 453 78888875
No 382
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=59.50 E-value=4.5 Score=38.98 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
..|+|+|||.||+..|..+.+. .|+ ++.++|+..-
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~~ 74 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSVS 74 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSSS
T ss_pred cCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCCC
Confidence 6899999999999999887641 143 6889998643
No 383
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=59.38 E-value=4.2 Score=42.64 Aligned_cols=33 Identities=21% Similarity=0.590 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 689999999999999987764 454 688888874
No 384
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=59.26 E-value=5.5 Score=36.75 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=51.2
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhh----ccccccCCcCCccCCCCH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA----PFAKDPGDFMGLREGASL 400 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~----~~A~~~~~~~~~~~~~~L 400 (533)
||+|+|+|..|..+|+.|.+. | .+++++|++- + .+..... .+...+. .+...|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~~----~--~~~~l~~~~~~~~i~gd~-----~~~~~l 58 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKDR----E--LCEEFAKKLKATIIHGDG-----SHKEIL 58 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESCH----H--HHHHHHHHSSSEEEESCT-----TSHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----H--HHHHHHHHcCCeEEEcCC-----CCHHHH
Confidence 799999999999999988753 4 3688888631 1 1111110 0111000 111235
Q ss_pred HHH-hcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 401 LEV-VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 401 ~e~-V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
.++ ++. +|++|-+.. .-.....+..+++..+..+-|++..|
T Consensus 59 ~~a~i~~--ad~vi~~~~--~d~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 59 RDAEVSK--NDVVVILTP--RDEVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp HHHTCCT--TCEEEECCS--CHHHHHHHHHHHHHTSCCCEEEECCC
T ss_pred HhcCccc--CCEEEEecC--CcHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 555 554 899886553 22223344444443456666666665
No 385
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=59.20 E-value=3.7 Score=42.04 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 5 ~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 579999999999999988765 353 6889998653
No 386
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=59.14 E-value=9.5 Score=41.13 Aligned_cols=97 Identities=9% Similarity=0.229 Sum_probs=56.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCCh-hhhccccccCCcCCccCCCC---
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGAS--- 399 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~-~k~~~A~~~~~~~~~~~~~~--- 399 (533)
.||||+|||+.|-++|.+|++- .++.. .+|.+.|++-- +.++.+ ....+.... . ...+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~----~dv~~----~~I~vaD~~~~----~~~~~~~~g~~~~~~~--V----dadnv~~ 75 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK----FDIKP----SQVTIIAAEGT----KVDVAQQYGVSFKLQQ--I----TPQNYLE 75 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----BCCCG----GGEEEEESSCC----SCCHHHHHTCEEEECC--C----CTTTHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCCce----eEEEEeccchh----hhhHHhhcCCceeEEe--c----cchhHHH
Confidence 5999999999999999999873 44432 36888886421 111111 111221110 0 1122
Q ss_pred -HHHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 009519 400 -LLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (533)
Q Consensus 400 -L~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSN 445 (533)
|..+++. +|++|=+| ...++.+++++-.+ ..=-.+-++|
T Consensus 76 ~l~aLl~~--~DvVIN~s--~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 76 VIGSTLEE--NDFLIDVS--IGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp HTGGGCCT--TCEEEECC--SSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred HHHHHhcC--CCEEEECC--ccccCHHHHHHHHH---cCCCEEECCC
Confidence 3345554 59999655 56678888887654 2334566776
No 387
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=59.13 E-value=5.6 Score=40.33 Aligned_cols=33 Identities=27% Similarity=0.555 Sum_probs=26.6
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
+.+|+|+|||.+|+..|..|.+. | .++.++|+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEec
Confidence 36899999999999999988653 4 368888875
No 388
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=59.11 E-value=5.9 Score=41.38 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|.||+..|..|.+. |- ..+|.++|+.
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred ceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 6899999999999999998764 31 1378899875
No 389
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=59.04 E-value=13 Score=36.43 Aligned_cols=52 Identities=10% Similarity=-0.031 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 301 aV~LAgli~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+.++..+.+++....--.. ++++|.|| |..|..+++++.. .|. +++.+|++
T Consensus 127 ~~~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~ 179 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVKPG---DYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCTT---CEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hhhHHHHHHHHHHhhCCCCC---CEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 33445555666533332334 79999996 8888888777654 342 68888763
No 390
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=58.68 E-value=5 Score=41.26 Aligned_cols=33 Identities=33% Similarity=0.575 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.||+..|-.+.+ .|. ++.++|+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999988764 353 689999865
No 391
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=58.59 E-value=5.3 Score=41.23 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|++-
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~~ 53 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESHK 53 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecCC
Confidence 6799999999999999888653 43 689999653
No 392
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=58.57 E-value=5.5 Score=41.44 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. ++.+++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~ 36 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEAR 36 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999998764 43 56666664
No 393
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=58.39 E-value=17 Score=35.27 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=24.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.||+|+|+|..|..+++.+.+. .+ +=++.+|+++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~----~~-------eLva~~d~~~ 37 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEK----GH-------EIVGVIENTP 37 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TC-------EEEEEECSSC
T ss_pred eEEEEECcCHHHHHHHHHHHhC----CC-------EEEEEEecCc
Confidence 6999999999998888877642 11 2356678764
No 394
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=58.33 E-value=17 Score=36.82 Aligned_cols=48 Identities=19% Similarity=0.192 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++..+.|++..+.+.. ++|+|+|||..|...+.+.... |. ++++.+|+
T Consensus 171 ~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~aiqlak~~-----Ga------~~Vi~~~~ 218 (398)
T 2dph_A 171 LPTGFHGCVSAGVKPG----SHVYIAGAGPVGRCAAAGARLL-----GA------ACVIVGDQ 218 (398)
T ss_dssp HHHHHHHHHHTTCCTT----CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEES
T ss_pred HHHHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcC
Confidence 3444566665544433 5999999998887776655432 43 47888875
No 395
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=57.51 E-value=5.5 Score=42.36 Aligned_cols=33 Identities=9% Similarity=0.354 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.+|+..|-.|.+ .|+ ++.++|++-
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 579999999999999988865 354 578888753
No 396
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=57.50 E-value=3.1 Score=40.69 Aligned_cols=99 Identities=17% Similarity=0.319 Sum_probs=57.7
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhc----cccccCCc-CC-ccC
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP----FAKDPGDF-MG-LRE 396 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~----~A~~~~~~-~~-~~~ 396 (533)
.||+|.|| |-.|..|++.|++ .| .+++.++++.- ..+.+.. +....-++ .+ ..+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~-------~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP-------RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC-------CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC-------CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 79999999 8888888888765 34 26888877520 1111111 11100000 00 112
Q ss_pred CCCHHHHhcccCCcEEEEeccCCCC-CCHHHHHHhhhcCCCCCeEE
Q 009519 397 GASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIF 441 (533)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~-Fteevv~~Ma~~~~erPIIF 441 (533)
..+|.++++..++|++|=+.+..+. -+..+++++.+..+-+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 3568889985569999987764332 46788888865331344554
No 397
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=57.49 E-value=24 Score=33.63 Aligned_cols=94 Identities=18% Similarity=0.310 Sum_probs=55.7
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||+|.|| |-.|..+++.|++. | .+++.+++. .+...+. ...+..-+ .. ..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~----~~~~~~~--~~~~~~~D-----l~-~~~~~~ 58 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----G-------NTPIILTRS----IGNKAIN--DYEYRVSD-----YT-LEDLIN 58 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESC----CC-------CCEEEECC-----CC-HHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCC----CCcccCC--ceEEEEcc-----cc-HHHHHH
Confidence 58999995 88888888887753 4 268888885 2211122 11221111 11 245778
Q ss_pred HhcccCCcEEEEeccCCCC------------CCHHHHHHhhhcCCCCCeEEecC
Q 009519 403 VVRKVKPHVLLGLSGVGGV------------FNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~------------Fteevv~~Ma~~~~erPIIFaLS 444 (533)
++++ +|++|=+.+..+. -+..+++++.+ ..-+.+||.=|
T Consensus 59 ~~~~--~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~r~v~~SS 109 (311)
T 3m2p_A 59 QLND--VDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYE-NNISNIVYAST 109 (311)
T ss_dssp HTTT--CSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred hhcC--CCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcc
Confidence 8874 9999977764332 14677888754 44455887433
No 398
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=57.40 E-value=5.4 Score=40.85 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=19.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (533)
.+|||+|||-+|+..|..|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999887654
No 399
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=57.39 E-value=5.9 Score=39.61 Aligned_cols=33 Identities=33% Similarity=0.597 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. .++.++++.
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~ 39 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERT 39 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECC
Confidence 6899999999999999988753 41 257777664
No 400
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=57.35 E-value=7.6 Score=39.91 Aligned_cols=22 Identities=41% Similarity=0.628 Sum_probs=20.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (533)
.+|+|+|||.+|+..|..|.+.
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~ 55 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGA 55 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC
Confidence 6899999999999999998764
No 401
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=57.34 E-value=4.9 Score=38.83 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=27.6
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
|+..+|||+|+|..|..-+++|+++ | .++.++|.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap 62 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAP 62 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECC
Confidence 4449999999999999999988875 3 26888876
No 402
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=57.29 E-value=14 Score=37.31 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 304 LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++..+.|++..+.+. . ++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 171 ~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVTAGVGP-G---STVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCCC-C---CEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 444556666544433 3 699999999888777655443 343 47888876
No 403
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=57.11 E-value=6.5 Score=38.89 Aligned_cols=99 Identities=18% Similarity=0.239 Sum_probs=56.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcccc---ccCCcCCccCCCCH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK---DPGDFMGLREGASL 400 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~---~~~~~~~~~~~~~L 400 (533)
.||.|+|+|+.|..+|..|.++ | .+++++|+..- .....++.-.+ +.... +..-..++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~------~~~~l~~~g~~~~~~~~~~-~~~~~~~~ 75 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE------IVDLINVSHTSPYVEESKI-TVRATNDL 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH------HHHHHHHHSCBTTBTTCCC-CSEEESCG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH------HHHHHHHhCCcccCCCCee-eEEEeCCH
Confidence 7999999999999999998764 4 36888877411 01110100000 00000 00112345
Q ss_pred HHHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 009519 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (533)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~ 449 (533)
.| ++. +|++| ++. +....+++++.++. +..+|..++|..+.
T Consensus 76 ~~-~~~--aDvVi-l~v-k~~~~~~v~~~l~~---~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 76 EE-IKK--EDILV-IAI-PVQYIREHLLRLPV---KPSMVLNLSKGIEI 116 (335)
T ss_dssp GG-CCT--TEEEE-ECS-CGGGHHHHHTTCSS---CCSEEEECCCCCCT
T ss_pred HH-hcC--CCEEE-EEC-CHHHHHHHHHHhCc---CCCEEEEEeCCCCC
Confidence 66 655 78766 332 34677788877642 55678889987553
No 404
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=56.91 E-value=13 Score=38.24 Aligned_cols=30 Identities=30% Similarity=0.380 Sum_probs=24.6
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
||.|+|+|..|..+|..|.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999988753 3 368888874
No 405
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=56.67 E-value=13 Score=37.18 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=23.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++|+|+|||+.|...+.+.... |. ++|+.+|+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~-----Ga------~~Vi~~~~ 226 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTA-----GA------SRIIGIDI 226 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEcC
Confidence 6999999998887776655433 43 47888875
No 406
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=56.60 E-value=10 Score=36.17 Aligned_cols=87 Identities=16% Similarity=0.271 Sum_probs=52.9
Q ss_pred CceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHH
Q 009519 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (533)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~ 401 (533)
..||+|.|| |-.|..+++.|++ .|. +++++++. ...++. +..++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D~~-----------------d~~~~~ 48 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELNLL-----------------DSRAVH 48 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCCTT-----------------CHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCCcc-----------------CHHHHH
Confidence 378999996 8888888877764 342 46666542 001111 123577
Q ss_pred HHhcccCCcEEEEeccCCCC-----------------CCHHHHHHhhhcCCCCCeEEecC
Q 009519 402 EVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~-----------------Fteevv~~Ma~~~~erPIIFaLS 444 (533)
++++.+++|++|=+.+..+. -+..+++.+.+ ..-+.+||.=|
T Consensus 49 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS 107 (321)
T 1e6u_A 49 DFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcc
Confidence 88886679999987765431 23456666643 44456887544
No 407
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=56.35 E-value=6.7 Score=40.05 Aligned_cols=22 Identities=41% Similarity=0.653 Sum_probs=19.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (533)
..|+|+|||-||+..|..|.++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhh
Confidence 5699999999999999988763
No 408
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=56.26 E-value=3.2 Score=42.56 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+ .|+ ++.++|++-
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999988764 454 577788754
No 409
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=56.24 E-value=7 Score=37.45 Aligned_cols=32 Identities=31% Similarity=0.460 Sum_probs=24.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
--++|+|||+||+..|-.+.+ .|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~lar-----~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGR-----ARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 458999999999988755443 454 68889874
No 410
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=56.07 E-value=6 Score=43.15 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|+|.||+..|..+.+ .| .++.++|+..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~-----~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAA-----RG-------HQVTLFDAHS 406 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 689999999999999988865 34 3699999864
No 411
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=55.83 E-value=6.5 Score=42.76 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.||+.+|..|.+ .|. ++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RGW-------QVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 589999999999999988865 353 799999853
No 412
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=55.78 E-value=5.9 Score=41.72 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=19.7
Q ss_pred eEEEeCchhHHHHHHHHHHHHHH
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAA 347 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~ 347 (533)
-||++|||.+|+++|-.|.+...
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~ 63 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALD 63 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHC
T ss_pred cEEEEcccHHHHHHHHHHHhcCC
Confidence 38999999999999988877643
No 413
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=55.77 E-value=7.4 Score=39.50 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (533)
.+|+|+|||.||+..|..|.+.
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~ 29 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ 29 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHh
Confidence 6899999999999999988764
No 414
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=55.50 E-value=6.9 Score=39.50 Aligned_cols=32 Identities=25% Similarity=0.490 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+. |. ++.+++++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~ 37 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEAR 37 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECC
Confidence 6899999999999999988763 43 47777765
No 415
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=55.33 E-value=8.2 Score=40.30 Aligned_cols=31 Identities=32% Similarity=0.429 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD 365 (533)
.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 6899999999999999998761 243 699999
No 416
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=55.20 E-value=6.8 Score=42.10 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|+|.+|+++|..+.+ .|+ ++.++|+..
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 579999999999999998865 364 688999764
No 417
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=54.93 E-value=5.7 Score=43.48 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.||+.+|..|.+ .|. ++.++|+..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 589999999999999988765 353 699999853
No 418
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=54.89 E-value=7.7 Score=40.63 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD 365 (533)
.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATL----YGK-------RVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHh----cCC-------eEEEEe
Confidence 6899999999999999998761 243 799999
No 419
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=54.89 E-value=6.7 Score=39.74 Aligned_cols=156 Identities=15% Similarity=0.199 Sum_probs=80.2
Q ss_pred CCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCcccccchhhhhHhhhcCCCCCceecEEeeccCCc
Q 009519 147 PRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNN 226 (533)
Q Consensus 147 prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILGLGDlG~~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN 226 (533)
|||-.++--|-++ |..++..++.||||.+.=| |.- +..-=||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~------~~~~~~Mki~IvTDSt~dL------------~~e----~~~~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQ------QMGRGSMNIAVVTDSTAYI------------PKE----MREQHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHH----HHHHHTEE---EECCEEECS--S
T ss_pred cCccccccccchh------hhCcCCCcEEEEEECCCCC------------CHH----HHHhCCeE---EEeEEEEEC--C
Confidence 5555554444442 2222335799999998744 111 11112576 888888774 3
Q ss_pred hhcccCcccccccccCCChhhhhHhHHHHHHHHHH--hCCCc-eeeeecCCCchHHH-HHHHHhccC-ceeccCcchhHH
Q 009519 227 QKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHA--RWPKA-IVQFEDFQMKWAFE-TLERYRKRF-CMFNDDIQGTAG 301 (533)
Q Consensus 227 ~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~--~~P~~-~I~~EDf~~~~af~-iL~ryr~~~-~~FnDDiQGTaa 301 (533)
+..+++- +-..+||.+.+++ ..|+. ....+|| .++|+ ++++|.+-+ .++.--
T Consensus 69 ~~Y~D~~---------------di~~~efy~~m~~~~~~p~TSqPs~~~~--~~~fe~l~~~~~~Ii~I~iSS~------ 125 (315)
T 3fys_A 69 ETYREEI---------------ELDWKSFYEEVKKHNELPTTSQPPIGEL--VALYEELGKSYDAVISIHLSSG------ 125 (315)
T ss_dssp CEEEBTT---------------TBCHHHHHHHHHTTTCCCEEECCCHHHH--HHHHHHHTTTCSEEEEEESCTT------
T ss_pred EEEECCC---------------CCCHHHHHHHHHhCCCCcccCCCCHHHH--HHHHHHHHhcCCcEEEEeCCCc------
Confidence 3333321 1236788888874 35764 6555555 23332 112222222 233333
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHH--HHHHcCC-Chhhhc
Q 009519 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQA--AARMAGN-NDAFAR 358 (533)
Q Consensus 302 V~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~--~~~~~Gl-s~~eA~ 358 (533)
|+|-+++.+.....+.+ .+|-++=..+++.|..-++..+ |. ++|. |.+|..
T Consensus 126 --LSGTy~sA~~Aa~~~~~---~~I~ViDS~~~s~g~g~lv~~Aa~l~-~~G~~s~eeI~ 179 (315)
T 3fys_A 126 --ISGTFSSAAAADSMVDN---IDVYPFDSEISCLAQGFYALKAAELI-KNGASSPEDII 179 (315)
T ss_dssp --TCSHHHHHHHGGGGCSS---CEEEEEECSSCHHHHHHHHHHHHHHH-HTTCCCHHHHH
T ss_pred --HhHHHHHHHHHHHhCCC---CCEEEECCchhHHHHHHHHHHHHHHH-HcCCCCHHHHH
Confidence 44455666655555666 7898888888887777777664 34 6899 887643
No 420
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=54.85 E-value=6.3 Score=40.60 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-.|+|+|||.||+..|..+.+ .|. ++.++|++
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 579999999999999988765 353 68999984
No 421
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=54.77 E-value=16 Score=33.63 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=55.8
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.+|+|.|| |-.|..+++.|++ .|- -++++++++.- .-..+...+..+.+- ++ .+..++.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~~---~~~~~~~~~~~~~~~--Dl---~d~~~~~~ 84 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQPA---KIHKPYPTNSQIIMG--DV---LNHAALKQ 84 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSGG---GSCSSCCTTEEEEEC--CT---TCHHHHHH
T ss_pred cEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcChh---hhcccccCCcEEEEe--cC---CCHHHHHH
Confidence 68999995 7777777777664 341 26777776421 001111111112111 00 12346888
Q ss_pred HhcccCCcEEEEeccCCCC--CCHHHHHHhhhcCCCCCeEEecC
Q 009519 403 VVRKVKPHVLLGLSGVGGV--FNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--Fteevv~~Ma~~~~erPIIFaLS 444 (533)
+++. .|++|=..+.... -++.+++.|.+ ..-+-|||.=|
T Consensus 85 ~~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~-~~~~~iV~iSS 125 (236)
T 3qvo_A 85 AMQG--QDIVYANLTGEDLDIQANSVIAAMKA-CDVKRLIFVLS 125 (236)
T ss_dssp HHTT--CSEEEEECCSTTHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HhcC--CCEEEEcCCCCchhHHHHHHHHHHHH-cCCCEEEEEec
Confidence 8887 7999965543222 35678888864 44455887544
No 422
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=54.68 E-value=15 Score=36.43 Aligned_cols=56 Identities=18% Similarity=0.212 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHHH-HHhCCCCCCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 298 GTAGVALAGLLGTV-RAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 298 GTaaV~LAgli~Al-r~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++-...++..+.|+ +..+.+... .++++|.|| |..|..+++++.. .|. ++++.+|+
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~--~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~ 194 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGS--NKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICG 194 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTS--CCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HhcccHHHHHHHHHHHhcCCCCCC--ccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeC
Confidence 33334455556666 454444330 049999998 8888877766554 343 37888876
No 423
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=54.29 E-value=7.3 Score=40.00 Aligned_cols=22 Identities=27% Similarity=0.463 Sum_probs=19.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (533)
.+|+|+|||.||+..|..|.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~ 61 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA 61 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 5899999999999999988763
No 424
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=54.26 E-value=12 Score=37.47 Aligned_cols=125 Identities=16% Similarity=0.103 Sum_probs=77.6
Q ss_pred cCceeccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCchhHHHHHHHHHHHHH
Q 009519 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (533)
Q Consensus 288 ~~~~FnDDi---QGTaaV~LAgli~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~ 346 (533)
-+.|.|--- +.+|=-+++.+++..|-. |. .-.+|...+|.|+|.|..|..+|+.+...
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~- 168 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF- 168 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT-
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC-
Confidence 366666533 334444678888776642 10 11245559999999999999999988643
Q ss_pred HHHcCCChhhhcCeEEEEec-cCccccCCCCCChhhhccccccCCcCCccCCCCHHHHhcccCCcEEEEecc----CCCC
Q 009519 347 ARMAGNNDAFARNKFFLLDK-DGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGV 421 (533)
Q Consensus 347 ~~~~Gls~~eA~~~i~lvD~-~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~ 421 (533)
|+ +++.+|+ .. ... .+.... .....+|.|+++. .|+++=.-- ..++
T Consensus 169 ----G~-------~V~~~d~~~~---------~~~---~~~~~g----~~~~~~l~ell~~--aDvVil~~p~~~~t~~~ 219 (320)
T 1gdh_A 169 ----DM-------DIDYFDTHRA---------SSS---DEASYQ----ATFHDSLDSLLSV--SQFFSLNAPSTPETRYF 219 (320)
T ss_dssp ----TC-------EEEEECSSCC---------CHH---HHHHHT----CEECSSHHHHHHH--CSEEEECCCCCTTTTTC
T ss_pred ----CC-------EEEEECCCCc---------Chh---hhhhcC----cEEcCCHHHHHhh--CCEEEEeccCchHHHhh
Confidence 43 6888886 31 110 111100 0012368999987 898774321 2367
Q ss_pred CCHHHHHHhhhcCCCCCeEEecCCC
Q 009519 422 FNEEVLKAMRESDSVKPAIFAMSNP 446 (533)
Q Consensus 422 Fteevv~~Ma~~~~erPIIFaLSNP 446 (533)
++++.++.|. +.-+|.-.|.-
T Consensus 220 i~~~~l~~mk----~gailIn~arg 240 (320)
T 1gdh_A 220 FNKATIKSLP----QGAIVVNTARG 240 (320)
T ss_dssp BSHHHHTTSC----TTEEEEECSCG
T ss_pred cCHHHHhhCC----CCcEEEECCCC
Confidence 8888888883 56788878763
No 425
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=54.16 E-value=5.7 Score=40.45 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=19.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQA 345 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (533)
.+|+|+|||.+|+..|..|.+.
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~ 38 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSR 38 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT
T ss_pred CcEEEECCCHHHHHHHHHHHHC
Confidence 5899999999999999988653
No 426
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=54.12 E-value=6.8 Score=38.12 Aligned_cols=101 Identities=13% Similarity=0.090 Sum_probs=58.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|+-|..+|..|.+. | .+++++|+.- + .+. ..+... +....-..+..++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g-------~~V~~~~r~~----~--~~~-----~~~~~g-~~~~~~~~~~~~~ 58 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----L-------PHTTLIGRHA----K--TIT-----YYTVPH-APAQDIVVKGYED 58 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----C-------TTCEEEESSC----E--EEE-----EESSTT-SCCEEEEEEEGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEEecc----C--cEE-----EEecCC-eeccceecCchHh
Confidence 5899999999999999988764 3 2577777640 0 010 000000 0000000122333
Q ss_pred h-cccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCcccC
Q 009519 404 V-RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAEC 452 (533)
Q Consensus 404 V-~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~aE~ 452 (533)
+ +. +|++| ++. +...++++++.++....+..+|..+.|-....|.
T Consensus 59 ~~~~--~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~ 104 (294)
T 3g17_A 59 VTNT--FDVII-IAV-KTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH 104 (294)
T ss_dssp CCSC--EEEEE-ECS-CGGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG
T ss_pred cCCC--CCEEE-EeC-CccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh
Confidence 3 33 68766 554 3446788888886534556788889998865443
No 427
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=54.10 E-value=14 Score=34.72 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=55.6
Q ss_pred eEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||+|.|| |-.|..+++.|.+. .| .+++.++++.- ....+......+.+- ++ .+..+|.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~---~~~~~~~~~v~~~~~--D~---~d~~~l~~~ 62 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE---KVPDDWRGKVSVRQL--DY---FNQESMVEA 62 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG---GSCGGGBTTBEEEEC--CT---TCHHHHHHH
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH---HHHHhhhCCCEEEEc--CC---CCHHHHHHH
Confidence 6899997 88888888885531 24 36777766421 001111111122211 11 123568889
Q ss_pred hcccCCcEEEEeccCCC------CCCHHHHHHhhhcCCCCCeEEec
Q 009519 404 VRKVKPHVLLGLSGVGG------VFNEEVLKAMRESDSVKPAIFAM 443 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g------~Fteevv~~Ma~~~~erPIIFaL 443 (533)
+++ .|++|=+.+... .-++.+++.|.+ ..-+.|||.=
T Consensus 63 ~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~-~gv~~iv~~S 105 (289)
T 3e48_A 63 FKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIG 105 (289)
T ss_dssp TTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred HhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHH-cCCCEEEEEc
Confidence 987 799997765432 134677888864 4446688743
No 428
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=54.01 E-value=20 Score=35.76 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=23.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++|+|+|||+.|...+.+.... |. ++|+.+|+
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~-----Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVC-----GA------SIIIAVDI 223 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-----TC------SEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEECC
Confidence 6999999998887776655432 43 46888875
No 429
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=53.88 E-value=17 Score=35.59 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 301 aV~LAgli~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.+.++..+.|+.....--.. ++|+|.|| |..|..+++++.. .|. +++.+|+
T Consensus 131 ~~~~~tA~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNG---ETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 34555566677333333334 69999999 8888877766653 342 6887775
No 430
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=53.56 E-value=31 Score=33.51 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=25.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.||.|+|+|..|..+|..|.+. |. +++.+|+
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~-----G~-------~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV-----GH-------YVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT-----TC-------EEEECSS
T ss_pred cEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEecC
Confidence 6899999999999999988764 43 6777776
No 431
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=53.52 E-value=6.3 Score=42.26 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 579999999999999987764 465 68899986
No 432
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=53.21 E-value=8 Score=36.00 Aligned_cols=92 Identities=16% Similarity=0.199 Sum_probs=56.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|..+|..+.. .|. +++++|++- +....+++.. . . ..++.++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----------~~~~~~~~~g--~---~-~~~~~~~ 80 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----------KRTARLFPSA--A---Q-VTFQEEA 80 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----------HHHHHHSBTT--S---E-EEEHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----------HHHHHHHHcC--C---c-eecHHHH
Confidence 689999999999999998764 343 588887631 1111122111 0 0 1268888
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~~ 449 (533)
++. +|++|= +..+. ..+++++ ++. ..+..+|.-+||+.+.
T Consensus 81 ~~~--~DvVi~-av~~~-~~~~v~~-l~~-~~~~~~vv~~s~g~~~ 120 (215)
T 2vns_A 81 VSS--PEVIFV-AVFRE-HYSSLCS-LSD-QLAGKILVDVSNPTEQ 120 (215)
T ss_dssp TTS--CSEEEE-CSCGG-GSGGGGG-GHH-HHTTCEEEECCCCCHH
T ss_pred HhC--CCEEEE-CCChH-HHHHHHH-HHH-hcCCCEEEEeCCCccc
Confidence 876 898873 33232 3445554 322 1256788899998763
No 433
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=52.97 E-value=46 Score=33.37 Aligned_cols=121 Identities=15% Similarity=0.149 Sum_probs=73.1
Q ss_pred HHHhhcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCc
Q 009519 102 LNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGS 181 (533)
Q Consensus 102 L~~L~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~~~i~~~l~n~p~~~v~viVVTDG~ 181 (533)
|++++.+++.+ .||=+|+...+..+.+- ++++|.|.|+-
T Consensus 21 lr~~~~~g~~i-----------~m~tayDa~sA~l~e~a------------------------------G~d~ilvGdSl 59 (275)
T 3vav_A 21 LQAMREAGEKI-----------AMLTCYDASFAALLDRA------------------------------NVDVQLIGDSL 59 (275)
T ss_dssp HHHHHHHTCCE-----------EEEECCSHHHHHHHHHT------------------------------TCSEEEECTTH
T ss_pred HHHHHHCCCcE-----------EEEeCcCHHHHHHHHHc------------------------------CCCEEEECcHH
Confidence 45555555544 26788888888777655 36899999986
Q ss_pred e--eeccCCCCCCcccccchhhhhHhhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHH
Q 009519 182 R--ILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAV 259 (533)
Q Consensus 182 r--ILGLGDlG~~Gm~I~~GKl~LY~a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av 259 (533)
. +||.-|.+.--|.-|+--+. ..+.|.+ ..||+.|.-+- -| .-.++.++.+
T Consensus 60 ~~~~lG~~dt~~vtldem~~h~~--aV~r~~~---~~~vvaD~pfg--------sY--------------~s~~~a~~~a 112 (275)
T 3vav_A 60 GNVLQGQTTTLPVTLDDIAYHTA--CVARAQP---RALIVADLPFG--------TY--------------GTPADAFASA 112 (275)
T ss_dssp HHHTTCCSSSTTCCHHHHHHHHH--HHHHTCC---SSEEEEECCTT--------SC--------------SSHHHHHHHH
T ss_pred HHHHcCCCCCCccCHHHHHHHHH--HHHhcCC---CCCEEEecCCC--------CC--------------CCHHHHHHHH
Confidence 4 56777766533333332111 2345665 68999998320 02 2356666655
Q ss_pred HHhC-CCc-eeeeecCCCchHHHHHHHHhcc-Ccee
Q 009519 260 HARW-PKA-IVQFEDFQMKWAFETLERYRKR-FCMF 292 (533)
Q Consensus 260 ~~~~-P~~-~I~~EDf~~~~af~iL~ryr~~-~~~F 292 (533)
.+.. -.+ .|++||=. .-.+..++.++. ||++
T Consensus 113 ~rl~kaGa~aVklEdg~--~~~~~i~~l~~~GIpv~ 146 (275)
T 3vav_A 113 VKLMRAGAQMVKFEGGE--WLAETVRFLVERAVPVC 146 (275)
T ss_dssp HHHHHTTCSEEEEECCG--GGHHHHHHHHHTTCCEE
T ss_pred HHHHHcCCCEEEECCch--hHHHHHHHHHHCCCCEE
Confidence 5444 244 99999953 344566666665 6666
No 434
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=52.84 E-value=13 Score=36.21 Aligned_cols=107 Identities=18% Similarity=0.232 Sum_probs=59.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCC-hhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-PAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~-~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||.|+|||+.|..+|..|.. .|.- ..++++|++---..+. .+. .+...+..+. .. ....+ .+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~-----~g~~-----~~V~l~d~~~~~~~~~-~~~~~~~~~~~~~~-~v---~~~~~-~~ 71 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ-----RGIA-----REIVLEDIAKERVEAE-VLDMQHGSSFYPTV-SI---DGSDD-PE 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHH-HHHHHHTGGGSTTC-EE---EEESC-GG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHH-HHHHHhhhhhcCCe-EE---EeCCC-HH
Confidence 589999999999999988764 3431 3799999853100000 000 0001111110 00 00113 34
Q ss_pred HhcccCCcEEEEeccCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 009519 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------------Fteevv~~Ma~~~~erPIIFaLSNPt~~ 449 (533)
+++. +|++|=+...+.. +-+++++.|++ +++..+|+.++||...
T Consensus 72 ~~~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 72 ICRD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPVDI 129 (319)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCchHH
Confidence 5665 8987743322221 11278888865 5778899999999863
No 435
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=52.72 E-value=32 Score=33.59 Aligned_cols=98 Identities=17% Similarity=0.249 Sum_probs=58.6
Q ss_pred CCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChh----hhccccccCCcCCcc
Q 009519 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA----AAPFAKDPGDFMGLR 395 (533)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~----k~~~A~~~~~~~~~~ 395 (533)
+...||+|.|| |-.|..+++.|++. .| -+++.+|+.. +.+... +..+.+-+ ..
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~------~~~~~~~~~~~v~~~~~D-----l~ 79 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT------DRLGDLVKHERMHFFEGD-----IT 79 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC------TTTGGGGGSTTEEEEECC-----TT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh------hhhhhhccCCCeEEEeCc-----cC
Confidence 33489999996 88898888887763 23 3788888742 112111 11222110 01
Q ss_pred -CCCCHHHHhcccCCcEEEEeccCCC----------------CCCHHHHHHhhhcCCCCCeEEecC
Q 009519 396 -EGASLLEVVRKVKPHVLLGLSGVGG----------------VFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 396 -~~~~L~e~V~~vkptvLIG~S~~~g----------------~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
+..++.+++++ +|++|=+.+... .-|..+++++.+ .. +.+||.=|
T Consensus 80 ~d~~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~-~~~v~~SS 141 (372)
T 3slg_A 80 INKEWVEYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVK-YG-KHLVFPST 141 (372)
T ss_dssp TCHHHHHHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHH-HT-CEEEEECC
T ss_pred CCHHHHHHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHH-hC-CcEEEeCc
Confidence 22457788886 999996655332 234667888854 44 77888554
No 436
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=52.68 E-value=6.9 Score=45.21 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|+|.||+..|..|.+. |. +++.++|++
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~~-----G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLARL-----GY------SDITIFEKQ 220 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESS
T ss_pred CEEEEECccHHHHHHHHHHHhc-----CC------CcEEEEeCC
Confidence 6899999999999999998753 53 258899886
No 437
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=52.60 E-value=29 Score=35.50 Aligned_cols=133 Identities=13% Similarity=0.049 Sum_probs=79.5
Q ss_pred HhCCCceeeeecCCCchHHHHHHHHhccCceec--cCcchhHHHHHHHHHHHHHHhC------CCCCCCCCceEEEeCch
Q 009519 261 ARWPKAIVQFEDFQMKWAFETLERYRKRFCMFN--DDIQGTAGVALAGLLGTVRAQG------LSLTDFADQKIVVVGAG 332 (533)
Q Consensus 261 ~~~P~~~I~~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgli~Alr~~g------~~l~dl~~~riv~~GAG 332 (533)
.+|.. +|-+--++ ..+.+.+.+|- .+||.| || +-=-+=+||=++.-.+..| ++++. .||+++|-+
T Consensus 98 s~~~D-~iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~g---l~va~vGD~ 170 (328)
T 3grf_A 98 SRMVD-ICTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKG---IKFAYCGDS 170 (328)
T ss_dssp TTTCS-EEEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGG---CCEEEESCC
T ss_pred HhhCC-EEEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCC---cEEEEeCCC
Confidence 34433 34344443 34555666664 589998 55 3334455666666666655 35666 999999998
Q ss_pred hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccc--cCCcCCccCCCCHHHHhcccCCc
Q 009519 333 SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD--PGDFMGLREGASLLEVVRKVKPH 410 (533)
Q Consensus 333 sAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~--~~~~~~~~~~~~L~e~V~~vkpt 410 (533)
. + .+|+-++.++. +-|+ +|.++-.+|+..+-.+.+.+.-+.+|+. ... ......++.|+|++ +|
T Consensus 171 ~-~-~va~Sl~~~~~-~~G~-------~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~--~v~~~~d~~eav~~--aD 236 (328)
T 3grf_A 171 M-N-NVTYDLMRGCA-LLGM-------ECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGG--SIKIFHDCKKGCEG--VD 236 (328)
T ss_dssp S-S-HHHHHHHHHHH-HHTC-------EEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCC--EEEEESSHHHHHTT--CS
T ss_pred C-c-chHHHHHHHHH-HcCC-------EEEEECChHhhhCCCHHHHHHHHHHHhhccCCC--eEEEEcCHHHHhcC--CC
Confidence 5 3 58888888877 5676 6888888887532111121122223322 100 00124689999999 89
Q ss_pred EEEE
Q 009519 411 VLLG 414 (533)
Q Consensus 411 vLIG 414 (533)
|+.-
T Consensus 237 vvyt 240 (328)
T 3grf_A 237 VVYT 240 (328)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9973
No 438
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=52.59 E-value=21 Score=35.52 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 306 gli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
..+.+++..+.+... ++|+|+|||..|...+.+.... |. +++.+|+
T Consensus 167 ta~~~l~~~~~~~~g---~~VlV~GaG~vG~~a~qlak~~-----Ga-------~Vi~~~~ 212 (357)
T 2cf5_A 167 TVYSPLSHFGLKQPG---LRGGILGLGGVGHMGVKIAKAM-----GH-------HVTVISS 212 (357)
T ss_dssp HHHHHHHHTSTTSTT---CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHHhcCCCCCC---CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 334566655544244 6999999998887777655432 42 6887775
No 439
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=52.38 E-value=10 Score=37.80 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=25.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|||+|||.||+..|..|.+ .|.+ -+|.++|++
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~-----~g~~-----~~V~lie~~ 38 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRK-----LDGE-----TPLLMITAD 38 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-----TCSS-----SCEEEECSS
T ss_pred CcEEEECChHHHHHHHHHHHh-----hCCC-----CCEEEEECC
Confidence 689999999999999988864 3432 257777654
No 440
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=52.34 E-value=13 Score=39.94 Aligned_cols=36 Identities=36% Similarity=0.483 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHc--CCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMA--GNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~--Gls~~eA~~~i~lvD~~ 367 (533)
-.|||+|||.||+..|-.|.+... +. |+ ++.++++.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~-~~~~G~-------~V~vlEk~ 73 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAA-QHEKDL-------RVCLVEKA 73 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHH-HTTCCC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhccc-ccCCCC-------cEEEEeCC
Confidence 469999999999999999887533 23 54 57777765
No 441
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=52.20 E-value=27 Score=33.80 Aligned_cols=103 Identities=15% Similarity=0.271 Sum_probs=56.5
Q ss_pred CCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCCh-hhhccccccCCcCCccCCC
Q 009519 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~-~k~~~A~~~~~~~~~~~~~ 398 (533)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|++.- ...+.+.. .+..+..- ++ .+..
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~l~~~~~~~~~~~--Dl---~d~~ 79 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFAT--GRREHLKDHPNLTFVEG--SI---ADHA 79 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS--CCGGGSCCCTTEEEEEC--CT---TCHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCCc--cchhhHhhcCCceEEEE--eC---CCHH
Confidence 34479999996 7778778777765 34 37888887421 00011111 01111111 00 1224
Q ss_pred CHHHHhcccCCcEEEEeccCCCC-------------CCHHHHHHhhhcCCCCCeEEec
Q 009519 399 SLLEVVRKVKPHVLLGLSGVGGV-------------FNEEVLKAMRESDSVKPAIFAM 443 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~-------------Fteevv~~Ma~~~~erPIIFaL 443 (533)
++.++++..++|++|=+.+.... -+..+++++.+ ..-+.|||.=
T Consensus 80 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~S 136 (333)
T 2q1w_A 80 LVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKK-NNVGRFVYFQ 136 (333)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEE
T ss_pred HHHHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHH-hCCCEEEEEC
Confidence 57788887789999977664322 13456666643 3445788743
No 442
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=52.14 E-value=7.4 Score=39.47 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.||+..|..|.+ .|.+ .+|.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCC
Confidence 589999999999999999875 3531 157777663
No 443
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=52.00 E-value=21 Score=35.44 Aligned_cols=46 Identities=15% Similarity=0.286 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
+..+.+++..+.+. . ++|+|+|||+.|...+.+.... |. +++.+|+
T Consensus 166 ~ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~qlak~~-----Ga-------~Vi~~~~ 211 (360)
T 1piw_A 166 LTVYSPLVRNGCGP-G---KKVGIVGLGGIGSMGTLISKAM-----GA-------ETYVISR 211 (360)
T ss_dssp HHHHHHHHHTTCST-T---CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHHHHcCCCC-C---CEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcC
Confidence 33455666544333 3 6999999998888777665543 42 5888875
No 444
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.96 E-value=8.3 Score=38.67 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.++||+|+|.||+..|..+.+ .| ++.++|+.-.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCC
Confidence 589999999999999988843 23 6889988654
No 445
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=51.92 E-value=35 Score=33.48 Aligned_cols=92 Identities=12% Similarity=0.032 Sum_probs=50.0
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
..||.|+|+|..|...++.+... .+. +-+.++|++ .+... .+++.-.- . ....++.|
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~----~~~------~~~av~d~~------~~~~~----~~a~~~~~-~--~~~~~~~~ 61 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLA----GNG------EVVAVSSRT------LESAQ----AFANKYHL-P--KAYDKLED 61 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHH----CSE------EEEEEECSC------SSTTC----C---CCCC-S--CEESCHHH
T ss_pred ceEEEEEechHHHHHHHHHHHhC----CCc------EEEEEEcCC------HHHHH----HHHHHcCC-C--cccCCHHH
Confidence 37999999998877666554331 221 123455652 11122 23322110 0 12468999
Q ss_pred HhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEE
Q 009519 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIF 441 (533)
+++.-++|+++ +++ |.....++++...+ ..++++.
T Consensus 62 ll~~~~~D~V~-i~t-p~~~h~~~~~~al~--aGk~Vl~ 96 (329)
T 3evn_A 62 MLADESIDVIY-VAT-INQDHYKVAKAALL--AGKHVLV 96 (329)
T ss_dssp HHTCTTCCEEE-ECS-CGGGHHHHHHHHHH--TTCEEEE
T ss_pred HhcCCCCCEEE-ECC-CcHHHHHHHHHHHH--CCCeEEE
Confidence 99976789887 554 55566666655433 3456554
No 446
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=51.87 E-value=16 Score=35.85 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 302 V~LAgli~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
+.++..+.|+.....--.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 138 ~~~~ta~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~G~-------~V~~~~~ 188 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEG---ETVYVSAASGAVGQLVGQLAKM-----MGC-------YVVGSAG 188 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhCCCCC---CEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3444555566322222234 69999997 8888887766654 342 6887775
No 447
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=51.84 E-value=7.9 Score=36.54 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=22.8
Q ss_pred CceEEEeCch---hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 323 DQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 323 ~~riv~~GAG---sAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.++++|-||+ -.|..+|+.|++ +|. +++++|++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 44 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQN 44 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCc
Confidence 3899999984 455666666554 453 68888875
No 448
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=51.66 E-value=9.6 Score=35.81 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=25.5
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
||.|+|+|..|..+|..|... |. .+++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999988754 42 367888764
No 449
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=51.54 E-value=9.1 Score=39.68 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
-+|+|+|||.+|+..|..|.+. |. ++.++|+.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 61 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASS-----GQ-------RVLIVDRR 61 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHHC-----CC-------ceEEEecc
Confidence 6899999999999999887653 43 57888875
No 450
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=51.54 E-value=8.1 Score=41.22 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.+|+|+|||.||+..|..+.+. |. ++.++|+
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~-----g~-------~v~liE~ 138 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKY-----GA-------KTAVLDY 138 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred ccEEEECCCccHHHHHHHHHhC-----CC-------eEEEEec
Confidence 6899999999999999888653 43 6888985
No 451
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=51.52 E-value=6 Score=41.37 Aligned_cols=152 Identities=11% Similarity=0.049 Sum_probs=88.7
Q ss_pred cccchHHHHHHHhhhccC--CC-----ccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCcccccchhh
Q 009519 129 YTPTVGLVCQNYSGLFRR--PR-----GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKL 201 (533)
Q Consensus 129 YTPtVg~ac~~~s~~~r~--pr-----Glyis~~d~~~i~~~l~n~p~~~v~viVVTDG~rILGLGDlG~~Gm~I~~GKl 201 (533)
++.+...++..+-..+.. +. |- +.-.+...+.++|+.. +++++++.+|+.+=-|-+.|-+-.-|.++..
T Consensus 163 ~~~G~~~a~~al~~~~~~~~~~~VNilG~-~~~~~~~eik~lL~~~---Gi~v~~~~~~~~~~ei~~~~~A~~niv~~~~ 238 (437)
T 3aek_A 163 FTQGEDTCLAAMVPTLDTTEAAELIVVGA-LPDVVEDQCLSLLTQL---GVGPVRMLPARRSDIEPAVGPNTRFILAQPF 238 (437)
T ss_dssp TTHHHHHHHHHHGGGSCBCCCCCEEEESC-CCHHHHHHHHHHHHHT---TCCCEEEESCSSGGGCCCBCTTCEEEESSTT
T ss_pred HHHHHHHHHHHHHHHhcccCCCcEEEEeC-CChhHHHHHHHHHHHc---CCceEEEcCCCCHHHHHhhhcCcEEEEECcc
Confidence 455566666666554432 11 21 2222225777888753 6777788888766666666665556655443
Q ss_pred hhHhh----hcCCCCCce-ecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCCceeeeecCCCc
Q 009519 202 DVYVA----AAGINPQRI-LPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMK 276 (533)
Q Consensus 202 ~LY~a----~aGI~P~~~-lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P~~~I~~EDf~~~ 276 (533)
..|++ =-|+..-.. +|+ |+ +-.++|+.++.+.+.. ..+
T Consensus 239 ~~~~A~~Le~~GiP~i~~~~P~------------------G~-----------~~T~~~l~~la~~~g~--------~~~ 281 (437)
T 3aek_A 239 LGETTGALERRGAKRIAAPFPF------------------GE-----------EGTTLWLKAVADAYGV--------SAE 281 (437)
T ss_dssp CHHHHHHHHHTTCEECCCCCSC------------------HH-----------HHHHHHHHHHHHHTTC--------CHH
T ss_pred HHHHHHHHHHcCCCeEecCCCc------------------CH-----------HHHHHHHHHHHHHHCC--------Chh
Confidence 33222 124542111 222 21 3488999999998842 112
Q ss_pred hHHHHHHHHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHH
Q 009519 277 WAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMA 342 (533)
Q Consensus 277 ~af~iL~ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll 342 (533)
.+-+++++.|.+ +..++......|.. .|++|+|-+.-..++++.|
T Consensus 282 ~~e~~i~~e~~~------------------~~~~l~~~~~~l~G---krv~i~g~~~~~~~l~~~L 326 (437)
T 3aek_A 282 KFEAVTAAPRAR------------------AKKAIAAHLETLTG---KSLFMFPDSQLEIPLARFL 326 (437)
T ss_dssp HHHHHHHHHHHH------------------HHHHHHTTHHHHTT---CEEEECSSSSCHHHHHHHH
T ss_pred hHHHHHHHHHHH------------------HHHHHHHHHHHhCC---CEEEEEcCchHHHHHHHHH
Confidence 355666666654 33444444444555 8999999999999999888
No 452
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=51.43 E-value=6.8 Score=39.02 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=28.0
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
++.+|||+|+|..|..-+++|+.+. .++.++|.+
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~G------------a~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTG------------CKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGT------------CEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCC------------CEEEEEcCC
Confidence 3499999999999999999998753 268888864
No 453
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=51.27 E-value=20 Score=35.69 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=23.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++|+|+|||+.|...+.+.... |. ++|+.+|+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~-----Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA-----GA------SRIIGVGT 224 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEECC
Confidence 6999999998888776655433 43 46888875
No 454
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=51.18 E-value=20 Score=35.59 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=23.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++|+|+|||+.|...+.+.... |. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~-----Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVA-----GA------SRIIGVDI 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEcC
Confidence 6999999998887776655433 43 46888775
No 455
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=50.85 E-value=10 Score=40.38 Aligned_cols=35 Identities=40% Similarity=0.595 Sum_probs=28.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
..|||+|+|.||+..|-.+.+. |. ++.++++...+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~-----G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKA-----GA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCCCC
Confidence 6899999999999999887654 53 68899987654
No 456
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=50.85 E-value=21 Score=35.17 Aligned_cols=32 Identities=16% Similarity=0.371 Sum_probs=21.1
Q ss_pred HHHHHHh----CCCCCCCCCceEEEeCchhHHHHHHHHHH
Q 009519 308 LGTVRAQ----GLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (533)
Q Consensus 308 i~Alr~~----g~~l~dl~~~riv~~GAGsAg~GiA~ll~ 343 (533)
+.|++.. +.- .. ++|+|+|||+.|...+.+..
T Consensus 156 ~~al~~~~~~~~~~-~g---~~VlV~GaG~vG~~aiqlak 191 (344)
T 2h6e_A 156 MGAIRQALPFISKF-AE---PVVIVNGIGGLAVYTIQILK 191 (344)
T ss_dssp HHHHHHHHHHHTTC-SS---CEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHhhhhcccCC-CC---CEEEEECCCHHHHHHHHHHH
Confidence 4555554 233 55 79999999877776665544
No 457
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=50.85 E-value=22 Score=34.59 Aligned_cols=50 Identities=18% Similarity=0.088 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 302 VALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 302 V~LAgli~Alr~~g~~l~dl~~~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
..++..+.|++....--.. ++++|.| +|..|..+++++... |. +++.+|+
T Consensus 123 ~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~~-----G~-------~V~~~~~ 173 (327)
T 1qor_A 123 LKGLTVYYLLRKTYEIKPD---EQFLFHAAAGGVGLIACQWAKAL-----GA-------KLIGTVG 173 (327)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTBHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred hHHHHHHHHHHHhhCCCCC---CEEEEECCCCHHHHHHHHHHHHc-----CC-------EEEEEeC
Confidence 3444555566532222234 6999999 588888887776543 42 6888876
No 458
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=50.68 E-value=7.1 Score=40.81 Aligned_cols=32 Identities=25% Similarity=0.611 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..++|+|||+||+..|..+.+ .|. ++.++|++
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HTD-------KVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TCS-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 479999999999999987764 353 68899975
No 459
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=50.56 E-value=18 Score=35.65 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=28.1
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 307 li~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.+.+++..+.+.. ++|+|+|||+.|...+.+... .|. +++.+|+
T Consensus 165 a~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 208 (348)
T 3two_A 165 TYSPLKFSKVTKG----TKVGVAGFGGLGSMAVKYAVA-----MGA-------EVSVFAR 208 (348)
T ss_dssp HHHHHHHTTCCTT----CEEEEESCSHHHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred HHHHHHhcCCCCC----CEEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 3556666544333 599999999777766655443 342 5777765
No 460
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=50.49 E-value=4.4 Score=42.50 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=26.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|||+|||.||+..|..|.+. .+|.++|+.-
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-------------~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-------------LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-------------CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-------------CCEEEEeCCC
Confidence 5799999999999999887643 3788998764
No 461
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=50.34 E-value=9 Score=40.76 Aligned_cols=35 Identities=37% Similarity=0.652 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
..|||+|+|.||+..|-.+.+ .|. ++.++++...+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 689999999999999987765 353 68899987554
No 462
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=50.27 E-value=7.6 Score=40.86 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-----G~-------~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988653 53 57888863
No 463
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=50.27 E-value=17 Score=35.77 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 306 gli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
..+.+++..+.+.. ++|+|.|||+.|...+.+... .|. +++.+|+
T Consensus 154 ta~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 198 (340)
T 3s2e_A 154 TVYKGLKVTDTRPG----QWVVISGIGGLGHVAVQYARA-----MGL-------RVAAVDI 198 (340)
T ss_dssp HHHHHHHTTTCCTT----SEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 34566665544443 599999999877776655443 342 6787765
No 464
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=50.07 E-value=8.1 Score=41.62 Aligned_cols=32 Identities=31% Similarity=0.422 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
..|+|+|||.+|+..|-.|.+. |+ ++.++|+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~-----G~-------~V~VlEr~ 81 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAG-----GV-------GALVLEKL 81 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEBSC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEcCC
Confidence 5799999999999999888653 54 57888875
No 465
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=49.86 E-value=28 Score=36.71 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=39.7
Q ss_pred CcEEEEeccCCCCCCHHHHHHhhhcCCCCCe-----EEecCCCCCcccCCHHHHhcccCCcEEEecCC
Q 009519 409 PHVLLGLSGVGGVFNEEVLKAMRESDSVKPA-----IFAMSNPTMNAECTAADAFKHAGENIVFASGS 471 (533)
Q Consensus 409 ptvLIG~S~~~g~Fteevv~~Ma~~~~erPI-----IFaLSNPt~~aE~tpe~A~~wt~Grai~AtGS 471 (533)
.+++|-.||++--.|+++.+.+.+ +++. ++-++||....|-++++-.... ..|++.++
T Consensus 122 g~iVV~~STV~pgtt~~v~~~i~e---~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p--~~Iv~G~~ 184 (431)
T 3ojo_A 122 GNTIIVESTIAPKTMDDFVKPVIE---NLGFTIGEDIYLVHCPERVLPGKILEELVHN--NRIIGGVT 184 (431)
T ss_dssp TEEEEECSCCCTTHHHHTHHHHHH---TTTCCBTTTEEEEECCCCCCTTSHHHHHHHS--CEEEEESS
T ss_pred CCEEEEecCCChhHHHHHHHHHHH---HcCCCcCCCeEEEECCCcCCCcchhhcccCC--CEEEEeCC
Confidence 357788899887788888887644 3443 6779999988888886555432 23555443
No 466
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=49.84 E-value=20 Score=32.25 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=55.9
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHH
Q 009519 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (533)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e 402 (533)
.||+|.|| |-.|..+++.|++ .| .++++++++.- ..+.+. ....+.+-+ ..+..++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~-~~~~~~~~D-----l~d~~~~~~ 63 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE---KIKIEN-EHLKVKKAD-----VSSLDEVCE 63 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG---GCCCCC-TTEEEECCC-----TTCHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc---cchhcc-CceEEEEec-----CCCHHHHHH
Confidence 58999996 7788877777765 34 37888887521 111221 111121110 112346888
Q ss_pred HhcccCCcEEEEeccCCC----------CCCHHHHHHhhhcCCCCCeEEecC
Q 009519 403 VVRKVKPHVLLGLSGVGG----------VFNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 403 ~V~~vkptvLIG~S~~~g----------~Fteevv~~Ma~~~~erPIIFaLS 444 (533)
+++. +|++|=+.+... ..+..+++.|.+ ..-+.+||.=|
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~Ss 112 (227)
T 3dhn_A 64 VCKG--ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKK-AGVNRFLMVGG 112 (227)
T ss_dssp HHTT--CSEEEECCCC------CCSHHHHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred HhcC--CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHH-hCCCEEEEeCC
Confidence 8886 899997654321 125567888864 44456777443
No 467
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=49.81 E-value=3.8 Score=41.68 Aligned_cols=130 Identities=18% Similarity=0.166 Sum_probs=74.5
Q ss_pred ceEEEeC-chhHHHHHHHHHHHHHHHHcCC-ChhhhcCeEEEEeccC---ccccCCCCCChhhhccccccCCcCCccCCC
Q 009519 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDKDG---LITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (533)
Q Consensus 324 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gl-s~~eA~~~i~lvD~~G---Li~~~r~~l~~~k~~~A~~~~~~~~~~~~~ 398 (533)
.||+|.| ||..|..+|.+|+. .|+ +++.-. .+.|+|.+. .+.-..-+|.+.-.+|.++. ....
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~-~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~------~~~~ 71 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPI-ILVLLDITPMMGVLDGVLMELQDCALPLLKDV------IATD 71 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCE-EEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE------EEES
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCC-EEEEEeCCCccccchhhHhhhHhhhhcccCCE------EEcC
Confidence 6899999 79999999888764 233 111111 289999853 11110012322212232211 1234
Q ss_pred CHHHHhcccCCcEEEEeccCC---CC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCcccCCHHHHhcccCC
Q 009519 399 SLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHAGE 463 (533)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~---g~-----------Fteevv~~Ma~~~~erPI-IFaLSNPt~~aE~tpe~A~~wt~G 463 (533)
++.+++++ .|++|=+.+.+ |- ..+++++.+.+ ++.+-+ |+-.|||.. +...-+++.+.+
T Consensus 72 ~~~~~~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~-~~~~~~~vivvsNPvd---~~t~~~~~~~~~ 145 (333)
T 5mdh_A 72 KEEIAFKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDK-YAKKSVKVIVVGNPAN---TNCLTASKSAPS 145 (333)
T ss_dssp CHHHHTTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH---HHHHHHHHTCTT
T ss_pred CcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEEcCCchH---HHHHHHHHHcCC
Confidence 68889988 89988444332 31 34677777754 666664 888999974 566666665532
Q ss_pred --cEEEecCC
Q 009519 464 --NIVFASGS 471 (533)
Q Consensus 464 --rai~AtGS 471 (533)
+-.|.+|.
T Consensus 146 ~p~~~ig~~t 155 (333)
T 5mdh_A 146 IPKENFSCLT 155 (333)
T ss_dssp SCGGGEEECC
T ss_pred CCcCEEEEEE
Confidence 12355554
No 468
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=49.68 E-value=8.7 Score=39.62 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|+|+|||-+|+..|-.|.+. | .++.++|++.-
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~-----G-------~~V~vlE~~~~ 45 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVD-----G-------KKVLHIDKQDH 45 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCCC
Confidence 6899999999999999888753 5 36888988754
No 469
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=49.62 E-value=11 Score=37.70 Aligned_cols=95 Identities=9% Similarity=0.072 Sum_probs=53.8
Q ss_pred CceEEEeCchhHHH-HHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHH
Q 009519 323 DQKIVVVGAGSAGL-GVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (533)
Q Consensus 323 ~~riv~~GAGsAg~-GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~ 401 (533)
..||.|+|+|..|. ..+..|... .|. +-+.++|++- +.-+.+++.-. .+...++.
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~----~~~------~l~av~d~~~----------~~~~~~a~~~g----~~~~~~~~ 82 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE----PLT------EVTAIASRRW----------DRAKRFTERFG----GEPVEGYP 82 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC----TTE------EEEEEEESSH----------HHHHHHHHHHC----SEEEESHH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC----CCe------EEEEEEcCCH----------HHHHHHHHHcC----CCCcCCHH
Confidence 38999999998876 455544331 122 2234666631 11123333211 11236799
Q ss_pred HHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEE--ecCC
Q 009519 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF--AMSN 445 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIF--aLSN 445 (533)
|+++.-++|+++ +++ |..+..++++...+ ..++|+. ||+.
T Consensus 83 ~ll~~~~~D~V~-i~t-p~~~h~~~~~~al~--aGk~Vl~EKP~a~ 124 (350)
T 3rc1_A 83 ALLERDDVDAVY-VPL-PAVLHAEWIDRALR--AGKHVLAEKPLTT 124 (350)
T ss_dssp HHHTCTTCSEEE-ECC-CGGGHHHHHHHHHH--TTCEEEEESSSCS
T ss_pred HHhcCCCCCEEE-ECC-CcHHHHHHHHHHHH--CCCcEEEeCCCCC
Confidence 999887789887 444 55666666665433 3456655 5553
No 470
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=49.55 E-value=8.5 Score=42.23 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=28.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.||+..|-.|.+...+..|+ ++.++|++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 57999999999999999887622111465 588888753
No 471
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=49.47 E-value=11 Score=38.34 Aligned_cols=37 Identities=22% Similarity=0.391 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCcc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi 370 (533)
.+|+|+|+|.||+..|..+.+.. .| .++.++|+...+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~---~g-------~~V~v~e~~~~~ 102 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR---PD-------LKVCIIESSVAP 102 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSSSC
T ss_pred CCEEEECccHHHHHHHHHHHhcC---CC-------CeEEEEecCccc
Confidence 68999999999999998886531 14 368899986443
No 472
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=49.43 E-value=10 Score=35.64 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=25.5
Q ss_pred CCCceEEEeCc-hh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 321 FADQKIVVVGA-GS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 321 l~~~riv~~GA-Gs-Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
|+.++++|.|| |+ .|..+|+.|++ +|. +++++|++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 44599999999 64 77777777765 353 68888874
No 473
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=49.26 E-value=12 Score=35.72 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=23.8
Q ss_pred CCCceEEEeCchh---HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 321 FADQKIVVVGAGS---AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 321 l~~~riv~~GAGs---Ag~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
|+.+++||-||++ .|.+||+.+.+ +|. +++++|++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQ-----LGA-------KLVFTYRK 41 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 3449999999853 45556666554 453 79999875
No 474
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=49.17 E-value=6.6 Score=42.66 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
..|+|+|||.||+..|-.|.+. .|+ ++.++|+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~----~G~-------~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAF----PDI-------RTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC----TTS-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHh----CCC-------CEEEEeCCC
Confidence 5799999999999999887650 354 577888753
No 475
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=49.10 E-value=15 Score=36.43 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 303 ~LAgli~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.++..+.++.....--.. ++|+|.|| |..|..++.++.. .|. +++.+|+
T Consensus 143 ~~~ta~~~l~~~~~~~~g---~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 143 NYHTMYFAYARRGQLRAG---ETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 344445555333332334 69999998 8888887766654 342 6777776
No 476
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=49.10 E-value=14 Score=34.74 Aligned_cols=86 Identities=22% Similarity=0.304 Sum_probs=53.5
Q ss_pred eEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
||+|.|| |-.|..+++.|+ . | .+++.+|++.- +.+- ++ .+..++.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~--------------~~~~--D~---~d~~~~~~~ 49 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSK--------------EFCG--DF---SNPKGVAET 49 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCS--------------SSCC--CT---TCHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccc--------------cccc--cC---CCHHHHHHH
Confidence 7999998 888888888776 3 3 36888877531 1110 00 122357888
Q ss_pred hcccCCcEEEEeccCCCC----------------CCHHHHHHhhhcCCCCCeEEecC
Q 009519 404 VRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 444 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~----------------Fteevv~~Ma~~~~erPIIFaLS 444 (533)
++..++|++|=+.+.... -+..+++++.+ ..- .+||.=|
T Consensus 50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS 104 (299)
T 1n2s_A 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANE-TGA-WVVHYST 104 (299)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTT-TTC-EEEEEEE
T ss_pred HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHH-cCC-cEEEEec
Confidence 887789999988764331 14566777643 332 4887544
No 477
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=49.06 E-value=12 Score=39.79 Aligned_cols=122 Identities=11% Similarity=0.116 Sum_probs=63.4
Q ss_pred HhHHHHHHHHHHhCCCceeeeecCCCchHHHHHHHHhccCceeccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEe
Q 009519 250 SIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVV 329 (533)
Q Consensus 250 ~~vdefv~av~~~~P~~~I~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgli~Alr~~g~~l~dl~~~riv~~ 329 (533)
+-.++|+..+.+.+..--| ..++-..+++.|.++ ..++.-....|.. .|++|+
T Consensus 286 ~~T~~~L~~ia~~~g~~~i------~~~~e~~i~~er~~~------------------~~al~~~~~~l~G---Krv~i~ 338 (483)
T 3pdi_A 286 TDTSQALRDFARLLDDPDL------TARTEALIAREEAKV------------------RAALEPWRARLEG---KRVLLY 338 (483)
T ss_dssp HHHHHHHHHHHHHTTCHHH------HHHHHHHHHHHHHHH------------------HHHHHHHHHHHTT---CEEEEE
T ss_pred HHHHHHHHHHHHHhCCcch------hhhHHHHHHHHHHHH------------------HHHHHHHHHHhcC---CEEEEE
Confidence 3467788877777631100 022334555555442 3333333344555 899999
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCC--CCChhhhccccccCCcCCccCCCCHHHHhccc
Q 009519 330 GAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERK--NLDPAAAPFAKDPGDFMGLREGASLLEVVRKV 407 (533)
Q Consensus 330 GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~--~l~~~k~~~A~~~~~~~~~~~~~~L~e~V~~v 407 (533)
|.+.-..+++++|.+. |+ .+..+- +.... +....+..+ .....+-...+...|++.++..
T Consensus 339 ~~~~~~~~l~~~L~El-----Gm-------evv~~g-----t~~~~~~d~~~~~~~l-~~~~~i~~d~d~~el~~~i~~~ 400 (483)
T 3pdi_A 339 TGGVKSWSVVSALQDL-----GM-------KVVATG-----TKKSTEEDKARIRELM-GDDVKMLDEGNARVLLKTVDEY 400 (483)
T ss_dssp CSSSCHHHHHHHHHHH-----TC-------EEEEEC-----BSSSCHHHHHHHHHHS-CSSCCBCCSCSHHHHHHHHHHT
T ss_pred CCCchHHHHHHHHHHC-----CC-------EEEEEe-----cCCCCHHHHHHHHHhc-CCCCEEEeCCCHHHHHHHHHhc
Confidence 9999889999887554 65 233321 22110 000111111 1111110001233577888889
Q ss_pred CCcEEEEec
Q 009519 408 KPHVLLGLS 416 (533)
Q Consensus 408 kptvLIG~S 416 (533)
+||.+||-|
T Consensus 401 ~pDL~ig~~ 409 (483)
T 3pdi_A 401 QADILIAGG 409 (483)
T ss_dssp TCSEEECCG
T ss_pred CCCEEEECC
Confidence 999999965
No 478
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=49.06 E-value=13 Score=37.02 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=22.7
Q ss_pred ceEEEeCchhHHHHH-HHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGV-LKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~Gi-A~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++|+|+|||+.|... +.+...+ .|. ++++.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~----~Ga------~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD----KGY------ENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT----TCC------CEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHH----cCC------cEEEEEeC
Confidence 699999998887766 5444122 353 45888886
No 479
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=49.06 E-value=20 Score=35.03 Aligned_cols=54 Identities=20% Similarity=0.089 Sum_probs=33.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 298 GTaaV~LAgli~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++-...++..+.|+......-.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 124 a~l~~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~-----~G~-------~V~~~~~ 178 (333)
T 1v3u_A 124 GTIGMPGLTAYFGLLEVCGVKGG---ETVLVSAAAGAVGSVVGQIAKL-----KGC-------KVVGAAG 178 (333)
T ss_dssp TTTSHHHHHHHHHHHTTSCCCSS---CEEEEESTTBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHhCChHHHHHHHHHHhhCCCCC---CEEEEecCCCcHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 33334455556666333332334 79999998 8888877776654 342 6888875
No 480
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=49.01 E-value=8.9 Score=42.84 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=28.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (533)
.+|+|+|||.+|+.+|..|.+. |. .++.++|++.+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~-----G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTR-----GW------NNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEeCCCC
Confidence 6899999999999999988753 53 36999998754
No 481
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=48.96 E-value=6.3 Score=42.68 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|||+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~-----~G~-------kV~VlEr~ 139 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQ-----MGF-------NPIIVERG 139 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHH-----TTC-------CCEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEEcc
Confidence 589999999999999988865 454 57788876
No 482
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=48.74 E-value=24 Score=34.21 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHH
Q 009519 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQ 344 (533)
Q Consensus 302 V~LAgli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~ 344 (533)
..++..+.|++..+.+ .. ++|+|+|||+.|...+.+...
T Consensus 126 ~~~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~a~qlak~ 164 (315)
T 3goh_A 126 CPLLTAWQAFEKIPLT-KQ---REVLIVGFGAVNNLLTQMLNN 164 (315)
T ss_dssp HHHHHHHHHHTTSCCC-SC---CEEEEECCSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhcCCC-CC---CEEEEECCCHHHHHHHHHHHH
Confidence 4455566666443333 33 699999999888877766554
No 483
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=48.71 E-value=46 Score=34.79 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|..+|..|.+.. .| .+++++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g---~G-------~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC---PE-------IRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC---TT-------SEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC---CC-------CEEEEEECC
Confidence 48999999999999999987641 02 268888874
No 484
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=48.68 E-value=9.9 Score=37.94 Aligned_cols=30 Identities=30% Similarity=0.469 Sum_probs=25.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.+|.|+|+|..|.+||..++ + |. +++++|+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~ 42 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDV 42 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECS
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEEC
Confidence 69999999999999999998 6 32 5777775
No 485
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=48.59 E-value=22 Score=35.32 Aligned_cols=45 Identities=18% Similarity=0.234 Sum_probs=27.4
Q ss_pred HHHHHHH--hCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 307 LLGTVRA--QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 307 li~Alr~--~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.+.|++. .+.+. . ++|+|+|||..|...+.+.... .|. +++.+|+
T Consensus 173 a~~al~~~~~~~~~-g---~~VlV~GaG~vG~~avqlak~~----~Ga-------~Vi~~~~ 219 (359)
T 1h2b_A 173 AYRAVKKAARTLYP-G---AYVAIVGVGGLGHIAVQLLKVM----TPA-------TVIALDV 219 (359)
T ss_dssp HHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHHHH----CCC-------EEEEEES
T ss_pred HHHHHHhhccCCCC-C---CEEEEECCCHHHHHHHHHHHHc----CCC-------eEEEEeC
Confidence 4556665 44333 3 6999999987766665544321 142 5888875
No 486
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=48.29 E-value=61 Score=31.86 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=50.3
Q ss_pred CceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHH
Q 009519 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (533)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~ 401 (533)
..||+|+|+ |..|.-+++.+.+ .|. +-++.+|.+.. + . ..+ +.+-..|+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g-~------~~~--------G~~vy~sl~ 57 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---G-T------THL--------GLPVFNTVR 57 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---T-C------EET--------TEEEESSHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---c-c------eeC--------CeeccCCHH
Confidence 379999999 9888777766544 243 34667776411 0 0 000 112246799
Q ss_pred HHhcccCCcEEEEeccCCCCCCHHHHHHhhh
Q 009519 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~ 432 (533)
|+.+..++|+.|=++ |..+..++++...+
T Consensus 58 el~~~~~~D~viI~t--P~~~~~~~~~ea~~ 86 (288)
T 2nu8_A 58 EAVAATGATASVIYV--PAPFCKDSILEAID 86 (288)
T ss_dssp HHHHHHCCCEEEECC--CGGGHHHHHHHHHH
T ss_pred HHhhcCCCCEEEEec--CHHHHHHHHHHHHH
Confidence 998854599987333 56788898888765
No 487
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=48.25 E-value=7.8 Score=38.93 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=18.7
Q ss_pred ceEEEeCchhHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQ 344 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~ 344 (533)
-+++|+|||.+|+..|..|.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~ 22 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK 22 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG
T ss_pred CCEEEECcCHHHHHHHHHHHh
Confidence 579999999999999988865
No 488
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=48.25 E-value=13 Score=42.00 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
.+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 369 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNF-----GI-------KVTVLEAKD 369 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeccc
Confidence 6899999999999999988764 43 677777643
No 489
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=47.96 E-value=21 Score=35.67 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=22.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999999887776655443 343 47888775
No 490
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=47.65 E-value=8.1 Score=40.01 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=26.2
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccC
Q 009519 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (533)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (533)
+.+||+|+|.|-+|++.|+.+.+ .|. ++...|++-
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~ 38 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRM 38 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCC
Confidence 34899999999999999876654 453 566777643
No 491
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=47.62 E-value=8.8 Score=39.39 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=19.1
Q ss_pred ceEEEeCchhHHHHHHHHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQ 344 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~ 344 (533)
.+|+|+|||.+|+..|..|.+
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~ 34 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKI 34 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHH
Confidence 689999999999999988865
No 492
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=47.44 E-value=10 Score=34.38 Aligned_cols=97 Identities=10% Similarity=0.170 Sum_probs=58.2
Q ss_pred eEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhcccc--ccCCcCCccCCCCHH
Q 009519 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK--DPGDFMGLREGASLL 401 (533)
Q Consensus 325 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~--~~~~~~~~~~~~~L~ 401 (533)
||+|+| +|..|..+|..|.+ .|. +++++|++- + .....+..+.. ..... ...++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g~-------~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~----~~~~~~ 59 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LGH-------EIVVGSRRE----E--KAEAKAAEYRRIAGDASI----TGMKNE 59 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEEESSH----H--HHHHHHHHHHHHHSSCCE----EEEEHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----H--HHHHHHHHhccccccCCC----ChhhHH
Confidence 799999 99999999988864 342 688888731 1 11111111100 00001 124688
Q ss_pred HHhcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 009519 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (533)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIFaLSNPt~ 448 (533)
++++. +|++|=+. +.-..+++++.+++.. +..+|.-++|+.+
T Consensus 60 ~~~~~--~D~Vi~~~--~~~~~~~~~~~l~~~~-~~~~vi~~~~g~~ 101 (212)
T 1jay_A 60 DAAEA--CDIAVLTI--PWEHAIDTARDLKNIL-REKIVVSPLVPVS 101 (212)
T ss_dssp HHHHH--CSEEEECS--CHHHHHHHHHHTHHHH-TTSEEEECCCCEE
T ss_pred HHHhc--CCEEEEeC--ChhhHHHHHHHHHHHc-CCCEEEEcCCCcC
Confidence 88887 89988433 2233567777764322 4678999999765
No 493
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=47.28 E-value=23 Score=31.36 Aligned_cols=47 Identities=15% Similarity=0.178 Sum_probs=35.4
Q ss_pred hhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCCceee
Q 009519 206 AAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQ 269 (533)
Q Consensus 206 a~aGI~P~~~lPI~LDvGTnN~~Ll~DP~YlG~r~~R~~g~eY~~~vdefv~av~~~~P~~~I~ 269 (533)
..+.-+|+- |+|..|||.- ..+-++|.+-++++++.+++..|++.|-
T Consensus 69 ~~~~~~pd~---Vvi~~G~ND~--------------~~~~~~~~~~l~~ii~~l~~~~p~~~ii 115 (200)
T 4h08_A 69 VLKNTKFDV---IHFNNGLHGF--------------DYTEEEYDKSFPKLIKIIRKYAPKAKLI 115 (200)
T ss_dssp HHHHSCCSE---EEECCCSSCT--------------TSCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHhcCCCCe---EEEEeeeCCC--------------CCCHHHHHHHHHHHHHHHhhhCCCccEE
Confidence 334455543 6788999852 3467999999999999999999987443
No 494
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=47.24 E-value=11 Score=39.32 Aligned_cols=33 Identities=33% Similarity=0.623 Sum_probs=25.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.+|+|+|||.+|+..|..|.+. |. .++.++|+.
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~-----g~------~~v~v~E~~ 42 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTEL-----GY------KNWHLYECN 42 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CSEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHHc-----CC------CCEEEEeCC
Confidence 6899999999999999888653 31 257777765
No 495
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=47.13 E-value=1.2e+02 Score=31.23 Aligned_cols=129 Identities=13% Similarity=0.192 Sum_probs=79.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
+|+++++-|..|...|+...-... ..+. +-+=.+|+. ..++ ++.+.- ...+ +.+...|++|+
T Consensus 8 ~~~vi~~~g~~~~~~aKta~gl~r-~~~~------~iVgvid~~---~~G~-d~ge~~-g~~~------gipi~~~l~~a 69 (349)
T 2obn_A 8 QRVAILLHEGTTGTIGKTGLALLR-YSEA------PIVAVIDRN---CAGQ-SLREIT-GIYR------YVPIVKSVEAA 69 (349)
T ss_dssp CCEEEECTTTSSSSSCHHHHHHHH-HCCS------CEEEEECGG---GTTS-CHHHHH-CCCS------CCCEESSHHHH
T ss_pred CcEEEEeCCCCCcHHHHHhHHhhh-cCCC------cEEEEEeCC---CCCC-cHHHhc-CCcC------CCCccCCHHHH
Confidence 799999999999998888855443 2232 344567876 3344 222211 1111 12345789999
Q ss_pred hcccCCcE-EEEeccCCCCCC----HHHHHHhhhcCCCCCeEEecCCCCCcccCCHH-HHhcccCCcEEEecCCCCccee
Q 009519 404 VRKVKPHV-LLGLSGVGGVFN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAA-DAFKHAGENIVFASGSPFENVD 477 (533)
Q Consensus 404 V~~vkptv-LIG~S~~~g~Ft----eevv~~Ma~~~~erPIIFaLSNPt~~aE~tpe-~A~~wt~Grai~AtGSPf~pv~ 477 (533)
++. +||+ +||+...+|.+. ++++++|.+ ---||=.|-+|-. -.|| .+.... |.-|+-++-|.+...
T Consensus 70 l~~-~~d~lvig~a~~gG~l~~~~~~~i~~Al~~---G~~Vvsglh~~l~---~~pel~~~A~~-g~~i~dvr~pp~~l~ 141 (349)
T 2obn_A 70 LEY-KPQVLVIGIAPKGGGIPDDYWIELKTALQA---GMSLVNGLHTPLA---NIPDLNALLQP-GQLIWDVRKEPANLD 141 (349)
T ss_dssp GGG-CCSEEEECCCCCCC-SCGGGHHHHHHHHHT---TCEEEECSSSCCT---TCHHHHHHCCT-TCCEEETTCCCSSCC
T ss_pred HhC-CCCEEEEEecCCCCCCCHHHHHHHHHHHHc---CCcEEeCccchhh---CCHHHHHHHHc-CCEEEEeccCccccc
Confidence 954 7876 679877788888 777777743 4556666655432 2233 222334 899999998765544
Q ss_pred c
Q 009519 478 L 478 (533)
Q Consensus 478 ~ 478 (533)
.
T Consensus 142 ~ 142 (349)
T 2obn_A 142 V 142 (349)
T ss_dssp C
T ss_pred c
Confidence 3
No 496
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=47.11 E-value=10 Score=40.35 Aligned_cols=32 Identities=31% Similarity=0.674 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (533)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-----GH-------QVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999998764 54 58888864
No 497
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=47.06 E-value=31 Score=33.94 Aligned_cols=90 Identities=18% Similarity=0.129 Sum_probs=51.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccCccccCCCCCChhhhccccccCCcCCccCCCCHHHH
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~~GLi~~~r~~l~~~k~~~A~~~~~~~~~~~~~~L~e~ 403 (533)
.||.|+|+|..|...++.|... .+. +-+.++|++ .+..+.+++.-.. ....++.|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~----~~~------~l~av~d~~----------~~~~~~~a~~~g~----~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN----PDL------ELVVIADPF----------IEGAQRLAEANGA----EAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TTE------EEEEEECSS----------HHHHHHHHHTTTC----EEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHhC----CCc------EEEEEECCC----------HHHHHHHHHHcCC----ceeCCHHHH
Confidence 6999999999888766655431 121 123356652 1111233332111 134789999
Q ss_pred hcccCCcEEEEeccCCCCCCHHHHHHhhhcCCCCCeEE
Q 009519 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (533)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~Ma~~~~erPIIF 441 (533)
++..++|+++ +++ |.....++++...+ ..++|+.
T Consensus 61 l~~~~~D~V~-i~t-p~~~h~~~~~~al~--~gk~v~~ 94 (344)
T 3euw_A 61 FARDDIDGIV-IGS-PTSTHVDLITRAVE--RGIPALC 94 (344)
T ss_dssp TTCSCCCEEE-ECS-CGGGHHHHHHHHHH--TTCCEEE
T ss_pred hcCCCCCEEE-EeC-CchhhHHHHHHHHH--cCCcEEE
Confidence 9977789887 444 45555666555433 3455553
No 498
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=46.91 E-value=24 Score=35.40 Aligned_cols=46 Identities=22% Similarity=0.244 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 305 Agli~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
...+.+++..+.+. . ++|+|+|||+.|...+.+... .|. +++.+|+
T Consensus 181 ~tA~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlak~-----~Ga-------~Vi~~~~ 226 (369)
T 1uuf_A 181 ITTYSPLRHWQAGP-G---KKVGVVGIGGLGHMGIKLAHA-----MGA-------HVVAFTT 226 (369)
T ss_dssp HHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 33456666554443 3 699999998777666554432 342 4777775
No 499
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=46.90 E-value=21 Score=35.18 Aligned_cols=44 Identities=16% Similarity=0.254 Sum_probs=28.7
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 307 li~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
.+.+++..+.+. . ++|+|.|||..|..++.++.. .|. +++.+|+
T Consensus 153 a~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~~~a~~-----~Ga-------~Vi~~~~ 196 (339)
T 1rjw_A 153 TYKALKVTGAKP-G---EWVAIYGIGGLGHVAVQYAKA-----MGL-------NVVAVDI 196 (339)
T ss_dssp HHHHHHHHTCCT-T---CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred HHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 455666554433 3 699999998877777665543 342 6887775
No 500
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=46.90 E-value=22 Score=35.42 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=22.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 009519 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (533)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~~eA~~~i~lvD~ 366 (533)
++|+|+|||+.|...+.+... .|. ++|+.+|+
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999999877776665543 343 46888775
Done!