Query 009523
Match_columns 532
No_of_seqs 562 out of 3552
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 14:09:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009523.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009523hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 4.2E-80 9.1E-85 640.0 41.5 387 143-532 7-395 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 2.5E-77 5.5E-82 626.0 41.4 383 145-530 1-386 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 1.4E-77 3.1E-82 596.3 35.0 386 143-532 7-426 (426)
4 PRK08114 cystathionine beta-ly 100.0 3.6E-73 7.8E-78 595.8 41.3 383 143-532 5-394 (395)
5 PRK08861 cystathionine gamma-s 100.0 2.5E-72 5.4E-77 591.0 41.6 379 143-532 5-384 (388)
6 KOG0053 Cystathionine beta-lya 100.0 1.8E-72 4E-77 575.7 35.8 389 139-532 17-407 (409)
7 PRK06702 O-acetylhomoserine am 100.0 1.4E-71 2.9E-76 590.1 41.6 383 144-530 7-423 (432)
8 PRK09028 cystathionine beta-ly 100.0 2.9E-71 6.2E-76 582.7 41.7 382 143-531 4-387 (394)
9 PRK08249 cystathionine gamma-s 100.0 1.6E-70 3.4E-75 580.5 43.5 386 143-531 8-393 (398)
10 PRK05967 cystathionine beta-ly 100.0 1.6E-70 3.5E-75 576.2 41.4 376 144-532 13-392 (395)
11 PRK08248 O-acetylhomoserine am 100.0 1.3E-69 2.8E-74 578.1 42.4 386 144-532 9-428 (431)
12 PRK08045 cystathionine gamma-s 100.0 2.6E-69 5.6E-74 569.0 42.5 380 142-532 3-383 (386)
13 TIGR01328 met_gam_lyase methio 100.0 4.9E-69 1.1E-73 568.3 43.2 386 144-532 4-391 (391)
14 PRK07812 O-acetylhomoserine am 100.0 4.8E-69 1E-73 573.3 42.9 385 144-531 14-431 (436)
15 PRK05613 O-acetylhomoserine am 100.0 3.8E-69 8.2E-74 574.2 42.0 386 144-532 14-437 (437)
16 PRK08134 O-acetylhomoserine am 100.0 2E-68 4.4E-73 568.8 43.1 386 143-531 8-427 (433)
17 PRK06084 O-acetylhomoserine am 100.0 1.7E-68 3.8E-73 568.8 42.5 385 144-531 3-422 (425)
18 PRK07810 O-succinylhomoserine 100.0 3.5E-68 7.6E-73 563.4 43.2 383 143-529 15-402 (403)
19 TIGR02080 O_succ_thio_ly O-suc 100.0 1.5E-67 3.2E-72 555.2 42.9 378 143-531 3-381 (382)
20 PRK08133 O-succinylhomoserine 100.0 1.8E-67 3.9E-72 556.5 43.1 384 144-531 7-390 (390)
21 PRK07049 methionine gamma-lyas 100.0 2.2E-67 4.9E-72 560.9 43.1 386 144-531 18-426 (427)
22 PRK07504 O-succinylhomoserine 100.0 3.1E-67 6.7E-72 555.8 43.1 385 144-532 11-396 (398)
23 PRK08574 cystathionine gamma-s 100.0 2.5E-67 5.5E-72 554.0 41.7 380 144-532 3-385 (385)
24 PRK05939 hypothetical protein; 100.0 2.6E-67 5.7E-72 555.5 41.8 370 159-531 5-396 (397)
25 PRK07503 methionine gamma-lyas 100.0 4.2E-67 9.2E-72 555.6 42.9 385 144-531 10-396 (403)
26 PRK06176 cystathionine gamma-s 100.0 4.9E-67 1.1E-71 550.9 41.9 376 144-532 3-379 (380)
27 TIGR01324 cysta_beta_ly_B cyst 100.0 7E-67 1.5E-71 548.7 42.4 375 146-532 1-377 (377)
28 PRK08776 cystathionine gamma-s 100.0 9.3E-67 2E-71 552.6 43.3 378 143-531 12-390 (405)
29 TIGR01325 O_suc_HS_sulf O-succ 100.0 1.4E-66 3E-71 548.2 42.4 380 145-529 1-380 (380)
30 PRK05994 O-acetylhomoserine am 100.0 2.6E-66 5.7E-71 552.9 43.5 386 143-531 7-426 (427)
31 PRK06234 methionine gamma-lyas 100.0 4.3E-66 9.3E-71 547.6 43.6 386 144-532 9-398 (400)
32 PRK07671 cystathionine beta-ly 100.0 5.4E-66 1.2E-70 542.7 42.7 374 144-530 3-377 (377)
33 PRK06767 methionine gamma-lyas 100.0 6.1E-66 1.3E-70 544.4 42.6 381 143-532 5-386 (386)
34 PLN02509 cystathionine beta-ly 100.0 7.4E-66 1.6E-70 550.8 42.0 374 144-531 87-461 (464)
35 PRK06460 hypothetical protein; 100.0 1.9E-65 4.1E-70 538.6 42.8 374 143-532 2-375 (376)
36 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 1.3E-65 2.7E-70 547.0 41.8 384 144-530 2-418 (418)
37 PRK06434 cystathionine gamma-l 100.0 1.7E-65 3.7E-70 537.7 39.9 377 142-531 7-384 (384)
38 cd00614 CGS_like CGS_like: Cys 100.0 4.8E-65 1E-69 534.8 41.2 368 162-530 1-369 (369)
39 TIGR01329 cysta_beta_ly_E cyst 100.0 6E-65 1.3E-69 535.1 41.8 374 145-532 2-376 (378)
40 PRK07811 cystathionine gamma-s 100.0 7.7E-65 1.7E-69 536.0 42.4 375 144-531 13-388 (388)
41 PRK07050 cystathionine beta-ly 100.0 2E-64 4.4E-69 533.4 41.1 380 143-531 9-391 (394)
42 PRK08064 cystathionine beta-ly 100.0 3E-63 6.5E-68 524.3 41.8 376 144-532 7-383 (390)
43 PLN02242 methionine gamma-lyas 100.0 5.7E-63 1.2E-67 525.4 41.8 382 143-531 17-415 (418)
44 PRK07269 cystathionine gamma-s 100.0 7.9E-62 1.7E-66 508.4 39.2 356 144-530 7-363 (364)
45 PRK05968 hypothetical protein; 100.0 1.6E-60 3.4E-65 503.4 41.1 374 146-531 11-386 (389)
46 PRK07582 cystathionine gamma-l 100.0 3.5E-60 7.5E-65 497.1 40.6 363 143-532 3-366 (366)
47 PRK08247 cystathionine gamma-s 100.0 5E-59 1.1E-63 488.5 40.6 362 141-531 2-364 (366)
48 COG1104 NifS Cysteine sulfinat 100.0 5E-31 1.1E-35 270.3 27.5 319 184-531 27-373 (386)
49 COG0520 csdA Selenocysteine ly 100.0 2.5E-26 5.5E-31 242.8 31.2 306 192-531 57-401 (405)
50 PRK10874 cysteine sulfinate de 100.0 4.7E-26 1E-30 241.7 30.5 294 199-530 61-393 (401)
51 PRK09295 bifunctional cysteine 99.9 1.9E-25 4.1E-30 237.6 30.7 297 198-531 64-400 (406)
52 TIGR03392 FeS_syn_CsdA cystein 99.9 1.9E-25 4.1E-30 236.8 30.3 292 201-530 60-390 (398)
53 PRK05957 aspartate aminotransf 99.9 1.1E-24 2.4E-29 230.4 32.3 287 200-530 68-384 (389)
54 COG0436 Aspartate/tyrosine/aro 99.9 2.7E-24 5.8E-29 227.3 33.9 276 199-517 63-375 (393)
55 PRK06207 aspartate aminotransf 99.9 1.6E-24 3.4E-29 230.5 32.0 284 202-530 83-401 (405)
56 PLN02855 Bifunctional selenocy 99.9 1.6E-24 3.4E-29 231.8 31.5 299 201-531 76-414 (424)
57 PLN03227 serine palmitoyltrans 99.9 1.4E-24 3E-29 229.9 30.5 299 195-530 39-377 (392)
58 PRK07324 transaminase; Validat 99.9 1.7E-24 3.8E-29 227.8 30.9 282 193-524 56-360 (373)
59 TIGR01979 sufS cysteine desulf 99.9 2.3E-24 5E-29 228.7 30.1 297 200-530 61-396 (403)
60 cd06453 SufS_like Cysteine des 99.9 1.4E-24 3E-29 227.8 27.7 293 201-529 43-373 (373)
61 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 5.2E-24 1.1E-28 223.0 31.8 223 194-422 37-284 (361)
62 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 4.1E-24 9E-29 226.0 31.0 225 192-422 54-303 (387)
63 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 4E-24 8.7E-29 224.8 30.4 282 200-531 50-368 (370)
64 PRK14807 histidinol-phosphate 99.9 6.9E-24 1.5E-28 221.4 31.4 283 195-528 53-349 (351)
65 TIGR01977 am_tr_V_EF2568 cyste 99.9 8E-24 1.7E-28 222.1 32.0 301 201-532 44-376 (376)
66 TIGR03403 nifS_epsilon cystein 99.9 4.3E-24 9.2E-29 225.2 30.0 305 198-531 36-371 (382)
67 COG0079 HisC Histidinol-phosph 99.9 2.8E-24 6.1E-29 223.8 28.0 287 194-530 50-353 (356)
68 PLN02721 threonine aldolase 99.9 6.5E-24 1.4E-28 220.7 30.5 285 198-530 37-351 (353)
69 PRK07179 hypothetical protein; 99.9 9.2E-24 2E-28 224.7 32.3 283 199-530 97-393 (407)
70 PRK07681 aspartate aminotransf 99.9 7.4E-24 1.6E-28 224.8 31.4 269 201-515 69-370 (399)
71 PLN02651 cysteine desulfurase 99.9 3.2E-24 6.9E-29 224.9 27.8 299 195-522 37-363 (364)
72 PRK06225 aspartate aminotransf 99.9 1.3E-23 2.8E-28 221.4 32.3 294 195-531 59-376 (380)
73 PLN03026 histidinol-phosphate 99.9 6.6E-24 1.4E-28 223.9 29.9 281 196-526 81-377 (380)
74 TIGR03402 FeS_nifS cysteine de 99.9 6.7E-24 1.5E-28 223.4 29.9 300 200-530 41-367 (379)
75 PRK02948 cysteine desulfurase; 99.9 5.8E-24 1.3E-28 224.0 29.3 311 193-531 35-370 (381)
76 PRK06290 aspartate aminotransf 99.9 1.3E-23 2.8E-28 223.9 31.8 286 197-531 77-405 (410)
77 TIGR01822 2am3keto_CoA 2-amino 99.9 2.6E-23 5.6E-28 219.8 33.8 284 200-530 82-384 (393)
78 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.4E-23 3E-28 222.2 31.0 295 201-529 60-397 (397)
79 TIGR03540 DapC_direct LL-diami 99.9 2.1E-23 4.5E-28 220.0 32.2 284 195-525 60-377 (383)
80 cd06454 KBL_like KBL_like; thi 99.9 2.8E-23 6E-28 215.4 32.1 286 199-531 44-347 (349)
81 PRK15481 transcriptional regul 99.9 8.6E-24 1.9E-28 226.6 29.0 286 197-530 116-430 (431)
82 PRK08960 hypothetical protein; 99.9 3.9E-23 8.5E-28 218.4 33.1 284 200-527 68-380 (387)
83 PRK06348 aspartate aminotransf 99.9 2.7E-23 5.8E-28 219.5 31.5 286 196-526 60-377 (384)
84 PRK04870 histidinol-phosphate 99.9 1.3E-23 2.8E-28 219.4 28.8 282 195-530 57-353 (356)
85 PRK06425 histidinol-phosphate 99.9 1E-23 2.2E-28 218.5 27.5 283 195-529 34-331 (332)
86 TIGR00474 selA seryl-tRNA(sec) 99.9 2.2E-24 4.7E-29 230.8 23.0 212 201-418 122-371 (454)
87 PRK06108 aspartate aminotransf 99.9 5.2E-23 1.1E-27 216.6 33.2 274 202-521 62-369 (382)
88 PRK05764 aspartate aminotransf 99.9 5.2E-23 1.1E-27 217.6 33.2 284 201-530 68-390 (393)
89 PRK07682 hypothetical protein; 99.9 1.3E-23 2.9E-28 221.2 28.3 286 200-530 56-375 (378)
90 PRK08361 aspartate aminotransf 99.9 2.3E-23 5E-28 220.4 30.0 273 199-515 68-372 (391)
91 PRK04781 histidinol-phosphate 99.9 3.7E-23 8E-28 217.0 30.9 285 195-529 53-361 (364)
92 PLN02187 rooty/superroot1 99.9 7.4E-23 1.6E-27 221.1 34.1 286 200-530 107-437 (462)
93 TIGR01141 hisC histidinol-phos 99.9 1.5E-23 3.2E-28 217.9 27.2 280 196-529 49-345 (346)
94 PRK00950 histidinol-phosphate 99.9 1.4E-23 3E-28 219.3 26.8 284 196-529 64-360 (361)
95 PRK05942 aspartate aminotransf 99.9 5.8E-23 1.3E-27 217.7 31.5 285 197-528 68-386 (394)
96 PRK02731 histidinol-phosphate 99.9 1.2E-23 2.5E-28 220.6 25.7 285 195-530 61-365 (367)
97 TIGR03537 DapC succinyldiamino 99.9 7.8E-23 1.7E-27 213.3 31.8 281 196-523 30-342 (350)
98 PRK09276 LL-diaminopimelate am 99.9 7E-23 1.5E-27 216.2 31.6 284 196-526 63-380 (385)
99 PRK01688 histidinol-phosphate 99.9 1.5E-23 3.3E-28 218.8 25.8 280 195-529 51-350 (351)
100 PRK12414 putative aminotransfe 99.9 1.6E-22 3.4E-27 213.7 33.8 281 202-526 71-379 (384)
101 PRK07337 aminotransferase; Val 99.9 6.4E-23 1.4E-27 216.8 30.8 281 202-526 68-381 (388)
102 PTZ00433 tyrosine aminotransfe 99.9 1.1E-22 2.4E-27 216.8 32.0 287 196-529 69-406 (412)
103 TIGR00858 bioF 8-amino-7-oxono 99.9 1.7E-22 3.6E-27 210.1 32.4 282 200-529 60-359 (360)
104 TIGR02006 IscS cysteine desulf 99.9 1.7E-23 3.8E-28 222.3 25.6 302 199-531 45-373 (402)
105 PRK07366 succinyldiaminopimela 99.9 8.9E-23 1.9E-27 215.7 30.8 278 201-524 68-380 (388)
106 PRK03158 histidinol-phosphate 99.9 3.3E-23 7.1E-28 216.6 26.9 278 197-527 60-357 (359)
107 PRK09147 succinyldiaminopimela 99.9 8E-23 1.7E-27 216.7 30.1 277 197-516 60-379 (396)
108 PRK08068 transaminase; Reviewe 99.9 1.4E-22 3E-27 214.3 31.8 284 195-525 63-380 (389)
109 PLN00145 tyrosine/nicotianamin 99.9 1.5E-22 3.3E-27 216.9 32.3 277 202-525 95-415 (430)
110 PLN02483 serine palmitoyltrans 99.9 2.7E-22 5.8E-27 218.0 34.5 285 198-529 142-460 (489)
111 PRK02610 histidinol-phosphate 99.9 9E-23 2E-27 214.8 29.5 282 196-531 61-371 (374)
112 PRK07550 hypothetical protein; 99.9 1.1E-22 2.4E-27 214.8 30.3 275 201-520 67-373 (386)
113 cd06502 TA_like Low-specificit 99.9 1.4E-22 3.1E-27 209.3 29.6 282 199-531 30-337 (338)
114 PRK05958 8-amino-7-oxononanoat 99.9 3.5E-22 7.5E-27 210.0 32.9 287 197-531 80-383 (385)
115 TIGR01140 L_thr_O3P_dcar L-thr 99.9 6.4E-23 1.4E-27 212.3 26.8 277 194-529 40-329 (330)
116 PLN00175 aminotransferase fami 99.9 5.4E-22 1.2E-26 211.6 34.6 272 202-515 92-395 (413)
117 PLN02656 tyrosine transaminase 99.9 3.1E-22 6.7E-27 213.2 32.4 278 201-525 73-394 (409)
118 PRK04311 selenocysteine syntha 99.9 3.2E-23 6.9E-28 222.5 24.9 213 201-419 127-377 (464)
119 TIGR01265 tyr_nico_aTase tyros 99.9 3.2E-22 7E-27 212.7 32.4 270 200-516 72-384 (403)
120 PRK08153 histidinol-phosphate 99.9 1.1E-22 2.4E-27 213.8 28.5 285 197-530 63-364 (369)
121 PLN00143 tyrosine/nicotianamin 99.9 3E-22 6.5E-27 213.3 32.0 283 201-529 74-402 (409)
122 PRK05387 histidinol-phosphate 99.9 1.4E-22 3E-27 211.2 28.4 281 196-530 55-352 (353)
123 TIGR01264 tyr_amTase_E tyrosin 99.9 3E-22 6.4E-27 212.7 31.3 286 199-531 71-399 (401)
124 cd06451 AGAT_like Alanine-glyo 99.9 2.8E-22 6.1E-27 209.0 30.3 288 201-531 32-353 (356)
125 TIGR03538 DapC_gpp succinyldia 99.9 2E-22 4.3E-27 213.4 29.6 286 196-525 58-386 (393)
126 PRK01533 histidinol-phosphate 99.9 3.4E-23 7.4E-28 217.4 23.4 275 196-530 59-354 (366)
127 PRK07309 aromatic amino acid a 99.9 3.9E-22 8.5E-27 211.2 31.5 285 202-530 68-387 (391)
128 PRK08912 hypothetical protein; 99.9 3.6E-22 7.9E-27 211.0 30.8 278 196-516 57-369 (387)
129 PRK04635 histidinol-phosphate 99.9 1.1E-22 2.4E-27 212.5 26.4 278 195-530 54-350 (354)
130 PRK13392 5-aminolevulinate syn 99.9 4E-22 8.7E-27 212.4 30.8 285 198-530 87-392 (410)
131 PRK08056 threonine-phosphate d 99.9 2.6E-22 5.6E-27 209.9 28.6 282 197-530 51-354 (356)
132 PF00266 Aminotran_5: Aminotra 99.9 2.5E-22 5.4E-27 211.0 28.2 299 193-525 35-371 (371)
133 PRK07777 aminotransferase; Val 99.9 1.1E-21 2.4E-26 207.3 33.1 282 201-525 61-377 (387)
134 COG1167 ARO8 Transcriptional r 99.9 6E-22 1.3E-26 213.6 31.2 284 201-527 132-448 (459)
135 PRK07683 aminotransferase A; V 99.9 1.8E-21 3.9E-26 205.9 34.0 276 200-521 64-370 (387)
136 COG1168 MalY Bifunctional PLP- 99.9 2.7E-21 5.8E-26 195.5 33.3 313 174-531 35-386 (388)
137 PRK09148 aminotransferase; Val 99.9 7.1E-22 1.5E-26 210.2 31.0 285 196-526 62-382 (405)
138 PRK09265 aminotransferase AlaT 99.9 1.1E-21 2.5E-26 208.5 32.2 289 197-530 67-400 (404)
139 PRK13355 bifunctional HTH-doma 99.9 1.6E-21 3.4E-26 213.9 33.8 287 197-529 180-512 (517)
140 TIGR01437 selA_rel uncharacter 99.9 3.6E-22 7.8E-27 209.5 27.4 295 199-532 43-362 (363)
141 PRK09082 methionine aminotrans 99.9 7.1E-22 1.5E-26 208.8 29.9 275 203-521 73-376 (386)
142 PRK06358 threonine-phosphate d 99.9 7.2E-22 1.6E-26 206.4 29.5 281 195-529 48-353 (354)
143 PRK07568 aspartate aminotransf 99.9 1.2E-21 2.5E-26 207.6 31.4 286 201-530 66-391 (397)
144 PRK03321 putative aminotransfe 99.9 2.4E-22 5.2E-27 209.5 25.4 279 196-531 52-351 (352)
145 PRK09105 putative aminotransfe 99.9 5.3E-22 1.1E-26 208.8 28.1 278 196-529 73-368 (370)
146 PRK08363 alanine aminotransfer 99.9 1.6E-21 3.5E-26 206.8 32.1 286 200-529 69-392 (398)
147 TIGR03235 DNA_S_dndA cysteine 99.9 2.7E-22 5.8E-27 209.2 25.6 282 201-513 42-353 (353)
148 PRK05166 histidinol-phosphate 99.9 4E-22 8.7E-27 209.6 27.1 281 196-529 66-369 (371)
149 cd00616 AHBA_syn 3-amino-5-hyd 99.9 7.5E-22 1.6E-26 205.1 28.8 304 198-530 15-352 (352)
150 PRK05664 threonine-phosphate d 99.9 1E-21 2.2E-26 203.4 29.0 269 197-529 46-326 (330)
151 PRK08175 aminotransferase; Val 99.9 1.2E-21 2.5E-26 207.8 29.6 278 203-525 69-380 (395)
152 PLN02450 1-aminocyclopropane-1 99.9 1.3E-21 2.8E-26 211.8 30.3 289 196-530 80-429 (468)
153 PRK03317 histidinol-phosphate 99.9 6.8E-22 1.5E-26 207.5 26.4 217 195-418 59-298 (368)
154 PRK13393 5-aminolevulinate syn 99.9 3.1E-21 6.7E-26 205.3 31.5 283 200-530 89-391 (406)
155 TIGR01821 5aminolev_synth 5-am 99.9 3E-21 6.4E-26 205.1 31.3 282 200-529 89-390 (402)
156 PRK06939 2-amino-3-ketobutyrat 99.9 3.8E-21 8.2E-26 203.1 31.8 284 200-530 86-392 (397)
157 PRK06107 aspartate aminotransf 99.9 6E-21 1.3E-25 202.8 33.3 282 204-531 77-400 (402)
158 PRK03967 histidinol-phosphate 99.9 9E-22 2E-26 204.4 26.4 271 194-530 48-333 (337)
159 PRK14012 cysteine desulfurase; 99.9 1.2E-21 2.6E-26 208.3 27.5 299 200-530 48-374 (404)
160 PRK08636 aspartate aminotransf 99.9 4.4E-21 9.6E-26 203.9 31.8 279 202-525 72-391 (403)
161 PTZ00377 alanine aminotransfer 99.9 5.2E-21 1.1E-25 208.0 32.4 292 196-530 109-474 (481)
162 TIGR03576 pyridox_MJ0158 pyrid 99.9 3.8E-21 8.2E-26 200.3 30.1 272 199-529 52-345 (346)
163 PRK14809 histidinol-phosphate 99.9 1.9E-21 4.1E-26 203.3 28.0 275 197-529 61-355 (357)
164 PF00155 Aminotran_1_2: Aminot 99.9 1.8E-21 3.9E-26 203.2 27.4 276 195-520 37-355 (363)
165 TIGR01825 gly_Cac_T_rel pyrido 99.9 8E-21 1.7E-25 200.2 32.4 288 195-530 72-380 (385)
166 PRK09064 5-aminolevulinate syn 99.9 4.7E-21 1E-25 203.8 30.9 284 199-530 89-392 (407)
167 TIGR03539 DapC_actino succinyl 99.9 3.2E-21 6.9E-26 201.7 29.0 268 196-516 50-345 (357)
168 PLN02822 serine palmitoyltrans 99.9 6.5E-21 1.4E-25 206.7 32.0 288 199-529 152-471 (481)
169 PRK07865 N-succinyldiaminopime 99.9 3E-21 6.5E-26 202.3 28.5 260 203-515 64-350 (364)
170 KOG1549 Cysteine desulfurase N 99.9 7.3E-22 1.6E-26 203.7 22.4 176 184-365 69-257 (428)
171 PRK06836 aspartate aminotransf 99.9 6.4E-21 1.4E-25 202.1 30.3 280 200-530 72-390 (394)
172 PRK07392 threonine-phosphate d 99.9 4.9E-21 1.1E-25 200.5 29.1 282 196-530 52-358 (360)
173 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.1E-20 2.5E-25 199.2 31.4 304 200-531 28-378 (380)
174 PRK10534 L-threonine aldolase; 99.9 8.5E-21 1.8E-25 196.3 29.8 253 196-476 28-303 (333)
175 COG0156 BioF 7-keto-8-aminopel 99.9 9.1E-21 2E-25 197.7 29.8 284 200-531 83-386 (388)
176 cd00609 AAT_like Aspartate ami 99.9 1.3E-20 2.9E-25 194.1 30.7 289 195-530 30-349 (350)
177 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.5E-20 5.4E-25 196.7 32.9 210 199-419 31-275 (379)
178 PRK07908 hypothetical protein; 99.9 1.2E-20 2.6E-25 196.6 29.3 276 196-530 52-346 (349)
179 PRK06959 putative threonine-ph 99.9 4.9E-21 1.1E-25 199.1 26.2 271 195-531 48-333 (339)
180 PRK00854 rocD ornithine--oxo-a 99.9 2.8E-20 6.1E-25 197.5 32.5 256 198-474 80-367 (401)
181 PRK05839 hypothetical protein; 99.9 2.6E-20 5.6E-25 196.1 30.3 274 195-522 53-362 (374)
182 PRK14808 histidinol-phosphate 99.9 9.6E-21 2.1E-25 196.6 26.0 244 195-475 50-308 (335)
183 TIGR02379 ECA_wecE TDP-4-keto- 99.9 4.6E-20 9.9E-25 194.3 31.3 257 200-476 30-319 (376)
184 PRK13034 serine hydroxymethylt 99.9 3.3E-20 7.2E-25 198.0 30.6 221 191-418 58-305 (416)
185 TIGR02326 transamin_PhnW 2-ami 99.9 3.9E-20 8.4E-25 193.7 30.5 258 201-477 35-328 (363)
186 PRK06855 aminotransferase; Val 99.9 4.8E-20 1E-24 197.9 31.6 232 201-455 73-345 (433)
187 PRK09440 avtA valine--pyruvate 99.9 1.6E-20 3.4E-25 200.3 27.7 299 197-530 69-410 (416)
188 PRK13479 2-aminoethylphosphona 99.9 5.1E-20 1.1E-24 193.1 30.1 287 201-530 37-362 (368)
189 PLN02376 1-aminocyclopropane-1 99.9 6.9E-20 1.5E-24 199.4 31.8 281 203-529 96-436 (496)
190 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1E-19 2.2E-24 189.0 31.6 288 201-531 31-353 (355)
191 PLN02607 1-aminocyclopropane-1 99.9 4.7E-20 1E-24 198.4 29.9 284 202-530 96-436 (447)
192 PRK07590 L,L-diaminopimelate a 99.9 4.8E-20 1E-24 196.4 29.6 256 199-479 74-378 (409)
193 KOG1368 Threonine aldolase [Am 99.9 1.8E-20 3.9E-25 182.7 22.9 312 169-529 26-362 (384)
194 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.4E-19 3.1E-24 190.6 31.7 257 200-476 30-318 (375)
195 PLN02409 serine--glyoxylate am 99.9 9.6E-20 2.1E-24 193.6 30.6 170 200-373 41-224 (401)
196 TIGR03542 DAPAT_plant LL-diami 99.9 1.1E-19 2.5E-24 193.1 30.8 280 199-525 73-395 (402)
197 PRK05937 8-amino-7-oxononanoat 99.9 1.1E-19 2.3E-24 191.2 30.1 278 199-531 54-346 (370)
198 cd00613 GDC-P Glycine cleavage 99.9 1.6E-19 3.5E-24 191.0 31.1 286 201-529 64-398 (398)
199 cd00378 SHMT Serine-glycine hy 99.9 7.4E-20 1.6E-24 194.1 28.4 255 199-476 59-339 (402)
200 PRK08354 putative aminotransfe 99.9 9.8E-20 2.1E-24 187.0 28.2 160 203-375 42-205 (311)
201 PF01041 DegT_DnrJ_EryC1: DegT 99.9 4E-20 8.6E-25 194.0 25.7 304 200-529 24-362 (363)
202 PRK03244 argD acetylornithine 99.9 1.2E-19 2.7E-24 192.4 29.3 289 193-531 77-394 (398)
203 PLN02955 8-amino-7-oxononanoat 99.9 2.4E-19 5.1E-24 191.2 31.1 280 201-531 147-457 (476)
204 PRK13520 L-tyrosine decarboxyl 99.9 1.9E-19 4.1E-24 188.5 29.8 274 203-530 61-366 (371)
205 COG0399 WecE Predicted pyridox 99.9 1.1E-19 2.5E-24 188.2 27.0 211 200-421 33-271 (374)
206 TIGR03812 tyr_de_CO2_Arch tyro 99.9 3.3E-19 7.2E-24 186.9 30.9 277 201-532 59-373 (373)
207 TIGR01814 kynureninase kynuren 99.9 3.2E-19 6.9E-24 189.9 30.2 281 203-531 73-403 (406)
208 PRK00011 glyA serine hydroxyme 99.9 2.4E-19 5.1E-24 191.3 28.9 254 200-476 66-343 (416)
209 COG2008 GLY1 Threonine aldolas 99.9 3.9E-19 8.5E-24 179.4 28.1 263 169-455 4-291 (342)
210 PRK04073 rocD ornithine--oxo-a 99.9 6.1E-19 1.3E-23 187.2 30.2 253 198-473 79-362 (396)
211 KOG0257 Kynurenine aminotransf 99.8 1.2E-19 2.5E-24 185.3 23.0 221 192-418 62-326 (420)
212 cd06450 DOPA_deC_like DOPA dec 99.8 1.8E-19 3.9E-24 186.8 24.9 267 200-531 37-344 (345)
213 PLN02231 alanine transaminase 99.8 1.3E-18 2.9E-23 190.6 32.6 216 201-422 168-441 (534)
214 PLN02724 Molybdenum cofactor s 99.8 6.9E-19 1.5E-23 201.8 30.0 325 188-531 65-484 (805)
215 TIGR00707 argD acetylornithine 99.8 1.4E-18 3E-23 182.7 28.5 286 195-530 63-376 (379)
216 cd00610 OAT_like Acetyl ornith 99.8 2.3E-18 4.9E-23 183.1 30.4 288 199-531 77-411 (413)
217 PLN02368 alanine transaminase 99.8 9.2E-19 2E-23 186.2 27.3 221 196-422 101-381 (407)
218 PTZ00376 aspartate aminotransf 99.8 1.3E-18 2.9E-23 185.0 28.5 213 201-418 72-337 (404)
219 PRK15407 lipopolysaccharide bi 99.8 3.5E-18 7.6E-23 183.3 31.6 210 200-420 62-330 (438)
220 PRK13238 tnaA tryptophanase/L- 99.8 3E-18 6.6E-23 184.7 30.7 211 199-418 76-335 (460)
221 PLN02672 methionine S-methyltr 99.8 2.3E-18 4.9E-23 198.0 31.2 211 203-418 736-989 (1082)
222 PTZ00125 ornithine aminotransf 99.8 5.7E-18 1.2E-22 179.7 30.5 285 199-531 71-395 (400)
223 PRK01278 argD acetylornithine 99.8 3.5E-18 7.5E-23 180.8 28.2 287 198-532 70-389 (389)
224 PTZ00094 serine hydroxymethylt 99.8 2E-18 4.3E-23 186.3 26.5 220 193-418 71-322 (452)
225 PRK09275 aspartate aminotransf 99.8 2.6E-18 5.7E-23 186.6 27.5 145 218-366 163-328 (527)
226 cd00615 Orn_deC_like Ornithine 99.8 6.2E-19 1.3E-23 179.7 20.4 167 192-365 50-235 (294)
227 PRK08637 hypothetical protein; 99.8 3.2E-17 6.9E-22 173.5 32.9 288 192-531 37-386 (388)
228 PRK00451 glycine dehydrogenase 99.8 1E-17 2.2E-22 180.6 29.5 283 203-531 114-444 (447)
229 PRK02627 acetylornithine amino 99.8 9.3E-18 2E-22 177.6 28.3 288 195-531 75-394 (396)
230 PRK09257 aromatic amino acid a 99.8 1.1E-17 2.5E-22 177.3 27.8 213 201-418 69-332 (396)
231 KOG0259 Tyrosine aminotransfer 99.8 1.5E-17 3.3E-22 167.3 26.8 223 199-427 101-361 (447)
232 TIGR03801 asp_4_decarbox aspar 99.8 2.8E-17 6.1E-22 178.3 29.9 145 218-366 157-327 (521)
233 cd00617 Tnase_like Tryptophana 99.8 2.1E-17 4.7E-22 176.1 28.3 212 199-418 51-310 (431)
234 PRK07505 hypothetical protein; 99.8 8.6E-17 1.9E-21 171.0 32.0 192 197-395 87-297 (402)
235 PLN02397 aspartate transaminas 99.8 4.3E-17 9.2E-22 174.6 28.1 214 200-418 90-355 (423)
236 PRK02936 argD acetylornithine 99.8 9.9E-17 2.2E-21 168.9 28.8 252 197-474 67-345 (377)
237 COG4992 ArgD Ornithine/acetylo 99.8 2.9E-17 6.4E-22 168.9 23.6 290 193-531 76-398 (404)
238 TIGR03246 arg_catab_astC succi 99.8 3.2E-16 7E-21 166.4 30.9 289 197-531 73-395 (397)
239 TIGR01788 Glu-decarb-GAD gluta 99.8 1.1E-16 2.4E-21 170.9 27.1 287 201-532 80-430 (431)
240 cd01494 AAT_I Aspartate aminot 99.8 1.4E-17 3E-22 153.4 17.5 156 203-364 2-170 (170)
241 PRK05093 argD bifunctional N-s 99.8 2.9E-16 6.4E-21 167.0 30.1 285 199-530 80-399 (403)
242 PRK04366 glycine dehydrogenase 99.8 1E-16 2.2E-21 174.1 26.4 165 201-371 113-297 (481)
243 PLN03032 serine decarboxylase; 99.8 2.3E-16 4.9E-21 165.4 27.4 225 187-418 52-314 (374)
244 PRK02769 histidine decarboxyla 99.8 2.4E-16 5.2E-21 166.0 27.0 235 189-428 53-320 (380)
245 PRK12381 bifunctional succinyl 99.8 6.5E-16 1.4E-20 164.6 30.4 287 197-530 77-398 (406)
246 TIGR01885 Orn_aminotrans ornit 99.8 9.3E-16 2E-20 163.0 31.5 258 198-474 76-368 (401)
247 PLN02624 ornithine-delta-amino 99.8 7.7E-16 1.7E-20 167.0 30.9 293 195-530 111-443 (474)
248 PRK13580 serine hydroxymethylt 99.7 5.9E-16 1.3E-20 165.5 27.4 290 199-530 89-444 (493)
249 COG0075 Serine-pyruvate aminot 99.7 2.5E-15 5.5E-20 155.8 29.7 215 201-419 38-285 (383)
250 PLN00144 acetylornithine trans 99.7 1.9E-15 4.2E-20 159.7 28.9 283 198-531 54-380 (382)
251 PLN03226 serine hydroxymethylt 99.7 1.7E-15 3.6E-20 163.9 28.9 224 192-422 65-336 (475)
252 KOG0633 Histidinol phosphate a 99.7 4.5E-16 9.8E-21 149.5 21.2 289 197-528 65-374 (375)
253 PF01212 Beta_elim_lyase: Beta 99.7 1.2E-17 2.6E-22 169.5 10.7 218 199-420 27-272 (290)
254 PRK03080 phosphoserine aminotr 99.7 1.3E-15 2.9E-20 160.7 25.1 279 201-530 48-368 (378)
255 KOG0256 1-aminocyclopropane-1- 99.7 3.9E-15 8.4E-20 151.3 27.0 269 203-519 123-446 (471)
256 cd00611 PSAT_like Phosphoserin 99.7 1.4E-15 3.1E-20 159.1 23.8 276 201-531 44-352 (355)
257 TIGR00713 hemL glutamate-1-sem 99.7 5.6E-15 1.2E-19 158.1 28.7 285 198-532 85-423 (423)
258 KOG1360 5-aminolevulinate synt 99.7 1.2E-15 2.5E-20 154.1 21.5 283 200-530 215-519 (570)
259 PRK04260 acetylornithine amino 99.7 6.5E-15 1.4E-19 155.2 27.9 276 202-530 67-372 (375)
260 PLN02414 glycine dehydrogenase 99.7 6.4E-15 1.4E-19 169.3 28.4 165 203-371 570-755 (993)
261 TIGR01364 serC_1 phosphoserine 99.7 8.8E-15 1.9E-19 152.8 26.9 285 192-531 25-344 (349)
262 PF06838 Met_gamma_lyase: Meth 99.7 4E-15 8.7E-20 150.3 23.0 258 191-469 47-332 (403)
263 PRK04013 argD acetylornithine/ 99.7 6.1E-15 1.3E-19 154.6 25.0 277 195-531 60-360 (364)
264 TIGR03531 selenium_SpcS O-phos 99.7 7.4E-15 1.6E-19 156.7 25.5 212 201-418 105-344 (444)
265 TIGR03372 putres_am_tran putre 99.7 4.8E-14 1E-18 151.3 31.4 287 198-531 114-440 (442)
266 PLN02271 serine hydroxymethylt 99.7 3.6E-14 7.8E-19 152.6 30.2 253 192-468 179-490 (586)
267 PRK04612 argD acetylornithine 99.7 1.7E-14 3.7E-19 153.6 26.4 290 198-531 79-403 (408)
268 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.7E-15 3.7E-20 159.3 18.3 177 198-381 63-274 (417)
269 PRK05355 3-phosphoserine/phosp 99.7 9.7E-15 2.1E-19 153.1 24.0 276 201-531 48-354 (360)
270 COG0112 GlyA Glycine/serine hy 99.7 1.9E-14 4.2E-19 146.4 24.2 253 192-468 57-339 (413)
271 KOG1359 Glycine C-acetyltransf 99.7 7.3E-15 1.6E-19 143.4 19.9 211 199-418 110-335 (417)
272 PRK03715 argD acetylornithine 99.7 2.7E-14 5.8E-19 151.6 26.1 235 197-455 74-339 (395)
273 PRK05964 adenosylmethionine--8 99.6 1.1E-13 2.3E-18 148.4 29.3 289 197-531 81-422 (423)
274 TIGR02618 tyr_phenol_ly tyrosi 99.6 2.3E-14 5E-19 151.4 23.4 214 199-421 69-330 (450)
275 PRK11522 putrescine--2-oxoglut 99.6 1.3E-13 2.9E-18 148.7 29.5 292 198-531 121-451 (459)
276 TIGR01366 serC_3 phosphoserine 99.6 2E-14 4.3E-19 150.9 22.5 284 201-531 41-356 (361)
277 COG1103 Archaea-specific pyrid 99.6 7.8E-14 1.7E-18 135.0 23.5 219 199-423 59-303 (382)
278 KOG0634 Aromatic amino acid am 99.6 2.4E-13 5.3E-18 139.4 27.3 272 219-528 126-460 (472)
279 PRK09792 4-aminobutyrate trans 99.6 2E-13 4.4E-18 146.1 28.3 292 195-529 77-419 (421)
280 PRK00062 glutamate-1-semialdeh 99.6 1.4E-13 3.1E-18 147.5 25.5 287 198-531 87-424 (426)
281 PRK08117 4-aminobutyrate amino 99.6 3.7E-13 8E-18 144.7 28.5 293 196-531 81-429 (433)
282 PRK08360 4-aminobutyrate amino 99.6 3.5E-13 7.6E-18 145.0 27.7 284 198-530 81-425 (443)
283 PRK08593 4-aminobutyrate amino 99.6 4.9E-13 1.1E-17 144.0 28.4 254 197-472 81-393 (445)
284 TIGR00700 GABAtrnsam 4-aminobu 99.6 1.1E-12 2.5E-17 140.3 31.0 288 195-529 70-418 (420)
285 PRK06058 4-aminobutyrate amino 99.6 9E-13 1.9E-17 142.0 30.2 290 196-532 94-443 (443)
286 PRK08088 4-aminobutyrate amino 99.6 5.6E-13 1.2E-17 142.9 28.5 289 198-531 81-423 (425)
287 COG0160 GabT 4-aminobutyrate a 99.6 4E-13 8.6E-18 142.2 26.6 288 195-531 92-445 (447)
288 PRK06777 4-aminobutyrate amino 99.6 1.5E-12 3.3E-17 139.4 30.8 289 195-530 77-420 (421)
289 PRK07495 4-aminobutyrate amino 99.6 5.1E-13 1.1E-17 143.1 26.6 288 197-531 79-421 (425)
290 PF00464 SHMT: Serine hydroxym 99.6 4.4E-14 9.5E-19 148.1 17.9 238 207-468 72-355 (399)
291 PRK09221 beta alanine--pyruvat 99.6 6.4E-13 1.4E-17 143.1 27.4 288 198-531 89-443 (445)
292 TIGR02407 ectoine_ectB diamino 99.6 1.1E-12 2.4E-17 140.0 28.9 285 198-529 75-410 (412)
293 COG0001 HemL Glutamate-1-semia 99.6 4.5E-13 9.7E-18 139.6 23.7 222 191-417 84-341 (432)
294 PRK05965 hypothetical protein; 99.6 1.3E-12 2.8E-17 141.2 28.0 289 198-531 87-447 (459)
295 PRK12403 putative aminotransfe 99.6 1.8E-12 3.8E-17 140.2 28.8 235 199-454 96-389 (460)
296 PRK06105 aminotransferase; Pro 99.6 1.3E-12 2.9E-17 141.2 27.9 242 195-454 86-386 (460)
297 PRK13360 omega amino acid--pyr 99.6 1.9E-12 4E-17 139.4 28.8 288 198-531 86-440 (442)
298 PRK09264 diaminobutyrate--2-ox 99.6 1.2E-12 2.7E-17 140.2 27.1 288 198-530 79-415 (425)
299 PLN02760 4-aminobutyrate:pyruv 99.6 2.5E-12 5.5E-17 140.2 29.8 288 198-531 130-491 (504)
300 PRK13237 tyrosine phenol-lyase 99.6 1E-12 2.2E-17 139.3 25.8 212 199-418 76-335 (460)
301 PRK07046 aminotransferase; Val 99.6 4.8E-12 1E-16 136.5 31.4 215 198-416 112-362 (453)
302 PRK15029 arginine decarboxylas 99.6 2.3E-13 5E-18 152.8 21.8 177 198-381 202-421 (755)
303 PRK05367 glycine dehydrogenase 99.6 1.8E-12 3.8E-17 149.9 29.5 288 203-531 544-871 (954)
304 PLN02880 tyrosine decarboxylas 99.6 1.4E-12 3.1E-17 141.8 26.9 234 199-455 116-419 (490)
305 PRK07678 aminotransferase; Val 99.6 2.3E-12 5.1E-17 139.0 28.1 294 197-532 85-450 (451)
306 PRK06082 4-aminobutyrate amino 99.5 2.2E-12 4.9E-17 139.4 27.7 291 193-531 105-451 (459)
307 PRK07482 hypothetical protein; 99.5 3.2E-12 6.9E-17 138.3 28.7 238 196-454 89-389 (461)
308 PRK05367 glycine dehydrogenase 99.5 1.1E-12 2.4E-17 151.5 26.3 159 203-371 123-292 (954)
309 PRK07986 adenosylmethionine--8 99.5 1.6E-12 3.4E-17 139.3 25.7 288 197-531 82-423 (428)
310 PRK12389 glutamate-1-semialdeh 99.5 7.6E-12 1.6E-16 134.3 30.6 216 198-417 90-340 (428)
311 PLN02590 probable tyrosine dec 99.5 5.6E-12 1.2E-16 137.8 29.4 254 193-469 158-488 (539)
312 PRK06173 adenosylmethionine--8 99.5 2.2E-12 4.7E-17 138.3 25.7 287 197-531 83-425 (429)
313 PRK06943 adenosylmethionine--8 99.5 3E-12 6.5E-17 138.2 26.9 289 197-531 93-446 (453)
314 PRK06541 hypothetical protein; 99.5 6.5E-12 1.4E-16 135.8 29.2 240 197-454 91-386 (460)
315 PRK05630 adenosylmethionine--8 99.5 2.9E-12 6.3E-17 137.1 25.6 286 197-530 79-419 (422)
316 PRK06062 hypothetical protein; 99.5 7.5E-12 1.6E-16 135.1 28.5 203 193-398 87-334 (451)
317 PRK07481 hypothetical protein; 99.5 8.7E-12 1.9E-16 134.5 28.9 289 198-531 83-445 (449)
318 PRK06918 4-aminobutyrate amino 99.5 1.3E-11 2.7E-16 133.5 30.1 287 197-530 93-442 (451)
319 TIGR00709 dat 2,4-diaminobutyr 99.5 1.3E-11 2.7E-16 133.1 29.9 234 198-454 79-366 (442)
320 PRK05769 4-aminobutyrate amino 99.5 8.8E-12 1.9E-16 134.2 28.5 283 197-531 93-439 (441)
321 PLN02414 glycine dehydrogenase 99.5 2.9E-12 6.3E-17 147.6 26.2 159 203-371 150-320 (993)
322 KOG1357 Serine palmitoyltransf 99.5 1.2E-13 2.6E-18 141.9 12.8 211 200-418 181-424 (519)
323 TIGR03799 NOD_PanD_pyr putativ 99.5 4.2E-12 9.1E-17 138.7 25.2 203 219-427 162-428 (522)
324 PRK13578 ornithine decarboxyla 99.5 9.7E-13 2.1E-17 146.5 20.4 176 199-381 172-395 (720)
325 PLN02263 serine decarboxylase 99.5 2.1E-11 4.5E-16 130.5 29.2 229 192-427 121-389 (470)
326 PRK06938 diaminobutyrate--2-ox 99.5 1.8E-11 3.9E-16 132.5 29.2 285 197-531 102-460 (464)
327 PRK08742 adenosylmethionine--8 99.5 5.6E-12 1.2E-16 136.6 25.0 290 197-531 103-467 (472)
328 PRK05639 4-aminobutyrate amino 99.5 3.5E-11 7.7E-16 130.0 31.2 284 199-530 94-442 (457)
329 COG4100 Cystathionine beta-lya 99.5 4.2E-12 9.2E-17 124.6 21.6 259 190-469 57-343 (416)
330 PRK07480 putative aminotransfe 99.5 1.1E-11 2.5E-16 133.8 27.2 240 197-454 90-385 (456)
331 COG0161 BioA Adenosylmethionin 99.5 7.6E-12 1.7E-16 131.8 24.9 291 195-531 82-443 (449)
332 KOG2862 Alanine-glyoxylate ami 99.5 1.7E-11 3.7E-16 121.1 25.4 212 204-419 53-302 (385)
333 PLN02482 glutamate-1-semialdeh 99.5 1.3E-11 2.8E-16 133.7 27.2 215 199-417 137-386 (474)
334 PRK07036 hypothetical protein; 99.5 3.1E-11 6.8E-16 130.8 29.0 239 198-454 92-389 (466)
335 PRK06916 adenosylmethionine--8 99.5 1.2E-11 2.5E-16 133.9 25.7 288 198-531 96-455 (460)
336 PRK00615 glutamate-1-semialdeh 99.5 1.9E-11 4.1E-16 131.1 27.1 216 198-417 90-341 (433)
337 COG0076 GadB Glutamate decarbo 99.5 6.8E-12 1.5E-16 134.9 23.4 227 205-455 105-381 (460)
338 PRK06149 hypothetical protein; 99.5 3.1E-11 6.6E-16 141.5 30.4 288 195-531 618-970 (972)
339 TIGR00461 gcvP glycine dehydro 99.5 1E-11 2.2E-16 141.6 25.1 212 203-419 532-786 (939)
340 PF00202 Aminotran_3: Aminotra 99.5 5.3E-12 1.2E-16 131.4 21.0 237 196-454 54-338 (339)
341 PRK12566 glycine dehydrogenase 99.5 1.7E-11 3.7E-16 139.1 26.3 147 203-353 545-709 (954)
342 PRK07030 adenosylmethionine--8 99.4 2.9E-11 6.3E-16 130.9 26.7 240 197-454 86-383 (466)
343 PRK07483 hypothetical protein; 99.4 3.1E-11 6.6E-16 130.0 25.5 294 197-531 69-437 (443)
344 TIGR03251 LAT_fam L-lysine 6-t 99.4 5.3E-11 1.1E-15 127.9 27.0 287 197-531 81-430 (431)
345 PRK06148 hypothetical protein; 99.4 1.1E-10 2.3E-15 137.2 31.1 288 196-531 658-1010(1013)
346 PF03841 SelA: L-seryl-tRNA se 99.4 3.5E-13 7.7E-18 137.8 8.9 177 205-387 51-249 (367)
347 PRK06931 diaminobutyrate--2-ox 99.4 2E-10 4.4E-15 124.2 30.3 233 197-454 97-385 (459)
348 TIGR00508 bioA adenosylmethion 99.4 1.6E-10 3.4E-15 124.0 28.0 287 197-530 84-425 (427)
349 PRK15400 lysine decarboxylase 99.4 2.8E-11 6.1E-16 134.8 22.6 149 199-354 193-373 (714)
350 COG3977 Alanine-alpha-ketoisov 99.4 6.2E-11 1.4E-15 116.5 22.0 295 201-530 78-410 (417)
351 PRK06917 hypothetical protein; 99.4 5E-10 1.1E-14 120.8 31.3 294 197-531 70-437 (447)
352 PRK08297 L-lysine aminotransfe 99.4 9.1E-11 2E-15 126.4 24.6 286 197-531 88-441 (443)
353 KOG1402 Ornithine aminotransfe 99.4 8.8E-11 1.9E-15 116.8 21.9 251 200-470 100-389 (427)
354 PF00282 Pyridoxal_deC: Pyrido 99.3 4.8E-11 1E-15 125.7 19.8 225 198-428 72-364 (373)
355 PRK15399 lysine decarboxylase 99.3 6.3E-11 1.4E-15 132.0 21.5 172 199-380 193-398 (713)
356 PLN02974 adenosylmethionine-8- 99.3 6.3E-10 1.4E-14 126.9 29.2 238 197-455 405-758 (817)
357 PF12897 Aminotran_MocR: Alani 99.3 3.9E-10 8.5E-15 115.2 23.8 284 201-526 69-407 (425)
358 TIGR00699 GABAtrns_euk 4-amino 99.3 1.2E-10 2.7E-15 125.5 21.3 280 198-531 98-462 (464)
359 COG3844 Kynureninase [Amino ac 99.3 3.2E-10 6.9E-15 112.9 22.1 161 203-364 78-244 (407)
360 COG1921 SelA Selenocysteine sy 99.3 7.3E-11 1.6E-15 121.9 18.1 187 205-397 72-269 (395)
361 KOG1404 Alanine-glyoxylate ami 99.3 3E-10 6.4E-15 115.6 21.9 261 193-479 84-407 (442)
362 TIGR01365 serC_2 phosphoserine 99.3 7E-10 1.5E-14 116.6 23.9 249 201-477 39-338 (374)
363 PRK06209 glutamate-1-semialdeh 99.3 9E-10 2E-14 118.4 23.5 211 202-417 89-328 (431)
364 COG1982 LdcC Arginine/lysine/o 99.3 8.2E-10 1.8E-14 118.9 22.9 158 200-364 69-246 (557)
365 TIGR00461 gcvP glycine dehydro 99.2 1.3E-09 2.9E-14 124.5 24.7 161 204-371 112-280 (939)
366 KOG1358 Serine palmitoyltransf 99.2 2.5E-10 5.4E-15 116.0 15.7 185 201-393 139-347 (467)
367 TIGR02617 tnaA_trp_ase tryptop 99.2 8.7E-10 1.9E-14 116.1 20.2 238 169-418 46-344 (467)
368 COG0403 GcvP Glycine cleavage 99.2 1.4E-08 3E-13 104.9 27.8 158 206-368 125-294 (450)
369 PLN02452 phosphoserine transam 99.2 2.8E-09 6.1E-14 111.9 23.4 244 201-474 52-327 (365)
370 KOG1401 Acetylornithine aminot 99.2 6.4E-09 1.4E-13 106.7 24.9 221 193-417 90-347 (433)
371 PF02347 GDC-P: Glycine cleava 99.2 8E-09 1.7E-13 109.2 25.3 209 203-418 112-364 (429)
372 KOG2467 Glycine/serine hydroxy 99.0 6.7E-08 1.5E-12 97.8 22.0 254 191-468 70-376 (477)
373 PRK12462 phosphoserine aminotr 99.0 2.4E-07 5.2E-12 96.8 26.1 242 201-472 49-324 (364)
374 TIGR03811 tyr_de_CO2_Ent tyros 99.0 1.5E-06 3.2E-11 96.5 33.7 171 242-418 224-475 (608)
375 COG1448 TyrB Aspartate/tyrosin 98.9 1.4E-06 3.1E-11 89.3 26.9 213 202-418 70-332 (396)
376 PRK12566 glycine dehydrogenase 98.9 6.3E-07 1.4E-11 102.5 26.0 155 204-370 127-293 (954)
377 COG1003 GcvP Glycine cleavage 98.8 3.1E-07 6.6E-12 95.2 18.9 144 202-351 110-270 (496)
378 KOG0258 Alanine aminotransfera 98.7 2.9E-06 6.2E-11 86.8 22.9 157 201-361 113-309 (475)
379 KOG0628 Aromatic-L-amino-acid/ 98.7 3.4E-06 7.3E-11 88.1 21.4 267 182-470 90-428 (511)
380 KOG1383 Glutamate decarboxylas 98.6 1.2E-06 2.7E-11 91.5 14.6 216 201-424 116-379 (491)
381 PF04864 Alliinase_C: Allinase 98.5 4.1E-06 8.8E-11 85.1 17.7 271 203-515 45-347 (363)
382 KOG1403 Predicted alanine-glyo 98.5 2E-06 4.4E-11 85.1 14.1 284 203-530 89-436 (452)
383 PF05889 SLA_LP_auto_ag: Solub 98.1 4E-05 8.6E-10 79.8 13.7 152 217-374 75-248 (389)
384 KOG0629 Glutamate decarboxylas 98.0 9.8E-05 2.1E-09 76.6 13.7 203 217-425 160-420 (510)
385 KOG1405 4-aminobutyrate aminot 97.7 0.00059 1.3E-08 69.5 13.9 178 276-479 255-452 (484)
386 KOG2040 Glycine dehydrogenase 97.7 0.00041 8.9E-09 75.2 12.7 214 203-421 584-839 (1001)
387 COG1932 SerC Phosphoserine ami 97.6 0.0086 1.9E-07 61.7 20.1 272 201-530 50-362 (365)
388 KOG1412 Aspartate aminotransfe 97.4 0.047 1E-06 55.2 22.0 150 219-372 102-279 (410)
389 COG3033 TnaA Tryptophanase [Am 97.3 0.0098 2.1E-07 61.0 16.4 213 199-418 77-346 (471)
390 KOG2040 Glycine dehydrogenase 97.3 0.0014 3.1E-08 71.2 10.3 137 207-349 169-309 (1001)
391 KOG3846 L-kynurenine hydrolase 97.1 0.0018 3.8E-08 64.9 7.8 160 206-365 116-293 (465)
392 KOG1411 Aspartate aminotransfe 96.2 0.28 6E-06 50.4 16.8 181 173-359 69-284 (427)
393 PLN02994 1-aminocyclopropane-1 96.1 0.016 3.4E-07 53.5 6.7 50 203-252 94-153 (153)
394 KOG3843 Predicted serine hydro 93.9 0.39 8.6E-06 47.6 9.5 162 206-375 62-251 (432)
395 PF02310 B12-binding: B12 bind 87.1 1.8 3.8E-05 37.5 6.2 88 255-344 18-110 (121)
396 cd02067 B12-binding B12 bindin 82.3 6.8 0.00015 33.9 7.8 90 255-346 17-110 (119)
397 PF05368 NmrA: NmrA-like famil 78.3 8.4 0.00018 37.3 7.8 91 224-321 7-98 (233)
398 PRK13396 3-deoxy-7-phosphohept 75.3 29 0.00064 36.4 11.0 56 275-330 220-284 (352)
399 cd00532 MGS-like MGS-like doma 72.2 20 0.00042 30.9 7.6 85 231-324 16-106 (112)
400 PF01596 Methyltransf_3: O-met 71.9 19 0.00042 34.7 8.3 123 199-327 29-158 (205)
401 TIGR02026 BchE magnesium-proto 66.2 20 0.00044 39.4 8.0 83 259-344 30-121 (497)
402 PRK13397 3-deoxy-7-phosphohept 66.0 1.1E+02 0.0025 30.5 12.4 43 287-329 150-196 (250)
403 PLN02476 O-methyltransferase 64.4 51 0.0011 33.5 9.8 123 199-327 102-231 (278)
404 TIGR01305 GMP_reduct_1 guanosi 62.8 1.9E+02 0.0042 30.2 13.6 125 219-344 97-240 (343)
405 PRK08091 ribulose-phosphate 3- 61.7 83 0.0018 31.0 10.4 69 272-343 127-205 (228)
406 cd02068 radical_SAM_B12_BD B12 60.8 37 0.0008 29.6 7.2 83 258-343 9-95 (127)
407 cd04726 KGPDC_HPS 3-Keto-L-gul 58.4 1.2E+02 0.0026 28.6 10.9 108 234-343 71-184 (202)
408 PRK05096 guanosine 5'-monophos 58.1 2.4E+02 0.0053 29.5 14.4 140 219-361 98-256 (346)
409 COG0552 FtsY Signal recognitio 58.0 53 0.0011 34.2 8.6 131 227-363 154-305 (340)
410 cd01078 NAD_bind_H4MPT_DH NADP 56.7 1.4E+02 0.003 28.0 11.0 104 218-330 30-134 (194)
411 PRK05234 mgsA methylglyoxal sy 56.6 59 0.0013 29.5 7.9 48 277-325 65-114 (142)
412 cd05013 SIS_RpiR RpiR-like pro 55.9 95 0.0021 26.6 9.1 31 287-321 61-91 (139)
413 COG1066 Sms Predicted ATP-depe 55.5 1.5E+02 0.0033 31.8 11.6 85 235-322 116-215 (456)
414 cd04736 MDH_FMN Mandelate dehy 54.3 54 0.0012 34.6 8.2 86 257-343 228-316 (361)
415 cd01422 MGS Methylglyoxal synt 52.1 1.1E+02 0.0024 26.5 8.7 58 264-322 44-106 (115)
416 PRK08745 ribulose-phosphate 3- 51.6 1.4E+02 0.003 29.3 10.1 81 260-343 105-197 (223)
417 PRK12595 bifunctional 3-deoxy- 51.4 1.2E+02 0.0026 32.0 10.3 80 261-340 221-317 (360)
418 PRK08883 ribulose-phosphate 3- 51.3 1.1E+02 0.0023 29.9 9.3 81 260-343 101-193 (220)
419 cd02071 MM_CoA_mut_B12_BD meth 51.3 58 0.0013 28.4 6.8 91 254-346 16-110 (122)
420 PLN02589 caffeoyl-CoA O-methyl 51.0 1.9E+02 0.0041 28.8 11.2 123 200-328 64-194 (247)
421 CHL00200 trpA tryptophan synth 50.8 86 0.0019 31.5 8.8 91 231-323 110-208 (263)
422 PLN02781 Probable caffeoyl-CoA 50.7 2.5E+02 0.0054 27.5 12.7 123 199-327 52-181 (234)
423 PF13460 NAD_binding_10: NADH( 50.7 75 0.0016 29.0 7.9 84 224-318 7-90 (183)
424 TIGR00511 ribulose_e2b2 ribose 50.6 1.7E+02 0.0038 29.9 11.2 103 213-322 112-222 (301)
425 PRK08535 translation initiatio 50.3 1.6E+02 0.0034 30.4 10.9 104 212-322 116-227 (310)
426 TIGR00640 acid_CoA_mut_C methy 49.8 76 0.0017 28.3 7.4 72 249-322 14-89 (132)
427 TIGR00262 trpA tryptophan synt 49.6 1.3E+02 0.0028 30.1 9.8 92 231-324 106-205 (256)
428 TIGR00524 eIF-2B_rel eIF-2B al 49.4 1.8E+02 0.0039 29.9 11.0 88 232-323 142-237 (303)
429 PRK05567 inosine 5'-monophosph 48.0 67 0.0015 35.3 8.2 110 233-343 233-358 (486)
430 PF02142 MGS: MGS-like domain 47.8 12 0.00025 31.3 1.7 79 234-321 7-94 (95)
431 PRK14057 epimerase; Provisiona 47.4 1.5E+02 0.0031 29.8 9.6 70 271-343 140-219 (254)
432 smart00851 MGS MGS-like domain 47.2 86 0.0019 25.6 6.9 44 277-321 45-89 (90)
433 COG1606 ATP-utilizing enzymes 46.4 92 0.002 31.2 7.8 100 217-328 19-124 (269)
434 PF01008 IF-2B: Initiation fac 45.7 1.5E+02 0.0032 29.8 9.7 103 215-323 106-216 (282)
435 cd04795 SIS SIS domain. SIS (S 45.3 1.1E+02 0.0024 24.0 7.2 53 265-322 25-79 (87)
436 COG1184 GCD2 Translation initi 45.0 2.1E+02 0.0046 29.4 10.5 103 213-322 116-226 (301)
437 PF14258 DUF4350: Domain of un 43.4 1.1E+02 0.0023 23.7 6.6 59 259-323 12-70 (70)
438 PLN02274 inosine-5'-monophosph 42.6 1.3E+02 0.0029 33.2 9.4 109 234-343 254-378 (505)
439 cd01424 MGS_CPS_II Methylglyox 42.0 1.6E+02 0.0034 25.0 8.0 87 227-323 13-101 (110)
440 cd02065 B12-binding_like B12 b 41.7 1.6E+02 0.0036 24.9 8.2 84 255-343 17-103 (125)
441 cd00381 IMPDH IMPDH: The catal 40.5 4.4E+02 0.0095 27.3 14.3 109 233-343 99-224 (325)
442 PF00478 IMPDH: IMP dehydrogen 40.4 40 0.00086 35.4 4.6 120 234-356 114-249 (352)
443 TIGR03573 WbuX N-acetyl sugar 39.1 1.8E+02 0.0039 30.4 9.4 115 204-325 43-168 (343)
444 PRK13307 bifunctional formalde 39.1 2.7E+02 0.0058 29.8 10.6 109 233-343 243-356 (391)
445 COG1087 GalE UDP-glucose 4-epi 38.7 1.5E+02 0.0033 30.5 8.2 97 219-319 2-111 (329)
446 PLN02591 tryptophan synthase 38.4 2.3E+02 0.005 28.3 9.5 92 229-322 95-194 (250)
447 PTZ00314 inosine-5'-monophosph 38.1 1.4E+02 0.0031 32.9 8.7 111 232-343 245-371 (495)
448 cd01018 ZntC Metal binding pro 37.8 1.6E+02 0.0034 29.4 8.5 70 239-322 169-245 (266)
449 PF10087 DUF2325: Uncharacteri 37.8 92 0.002 25.9 5.7 62 256-324 14-82 (97)
450 COG0159 TrpA Tryptophan syntha 37.1 2.4E+02 0.0051 28.5 9.3 79 241-321 124-209 (265)
451 COG2099 CobK Precorrin-6x redu 36.7 1.1E+02 0.0023 30.7 6.7 93 220-322 5-98 (257)
452 cd01017 AdcA Metal binding pro 36.3 1.5E+02 0.0033 29.8 8.1 69 239-321 170-247 (282)
453 cd02070 corrinoid_protein_B12- 36.3 3E+02 0.0064 26.2 9.7 89 254-346 99-192 (201)
454 PRK13398 3-deoxy-7-phosphohept 36.2 4.5E+02 0.0098 26.4 11.3 68 262-329 131-208 (266)
455 PRK06843 inosine 5-monophospha 36.2 1.6E+02 0.0034 31.7 8.4 111 232-343 157-283 (404)
456 PRK02261 methylaspartate mutas 36.1 1.3E+02 0.0027 27.1 6.7 60 255-316 21-81 (137)
457 COG1737 RpiR Transcriptional r 36.1 2.9E+02 0.0062 27.9 10.0 43 299-345 186-228 (281)
458 COG0514 RecQ Superfamily II DN 36.0 1.7E+02 0.0037 33.0 8.9 94 222-326 40-141 (590)
459 PRK09722 allulose-6-phosphate 36.0 2.7E+02 0.0059 27.4 9.5 81 260-343 103-195 (229)
460 TIGR03649 ergot_EASG ergot alk 35.8 1.5E+02 0.0033 29.3 8.0 77 233-318 16-97 (285)
461 PRK08335 translation initiatio 35.8 4.3E+02 0.0094 26.8 11.1 104 211-322 104-216 (275)
462 cd01137 PsaA Metal binding pro 35.6 1E+02 0.0022 31.2 6.8 67 240-320 177-252 (287)
463 TIGR01302 IMP_dehydrog inosine 35.6 1.2E+02 0.0026 33.0 7.6 108 235-343 231-354 (450)
464 PRK11557 putative DNA-binding 35.5 3.7E+02 0.008 26.7 10.8 42 299-344 184-225 (278)
465 PRK13125 trpA tryptophan synth 35.4 3E+02 0.0065 27.1 9.9 91 233-325 94-193 (244)
466 TIGR00649 MG423 conserved hypo 35.3 2.1E+02 0.0046 30.6 9.5 76 238-318 317-401 (422)
467 PRK13937 phosphoheptose isomer 35.3 3.6E+02 0.0078 25.3 10.0 41 299-343 115-155 (188)
468 PF03435 Saccharop_dh: Sacchar 35.1 1.8E+02 0.004 30.5 8.8 93 220-323 2-96 (386)
469 PF07085 DRTGG: DRTGG domain; 35.0 99 0.0021 26.0 5.6 48 268-322 43-90 (105)
470 PRK00414 gmhA phosphoheptose i 34.6 2.2E+02 0.0049 26.9 8.5 43 299-345 120-162 (192)
471 COG1954 GlpP Glycerol-3-phosph 33.4 63 0.0014 30.3 4.2 80 275-373 12-93 (181)
472 cd02072 Glm_B12_BD B12 binding 33.0 1.3E+02 0.0029 26.7 6.2 62 254-317 16-78 (128)
473 TIGR01501 MthylAspMutase methy 32.7 1.3E+02 0.0029 27.0 6.2 62 254-317 18-80 (134)
474 PRK11889 flhF flagellar biosyn 32.6 3.9E+02 0.0084 28.9 10.5 91 235-327 264-363 (436)
475 cd04724 Tryptophan_synthase_al 32.5 2.9E+02 0.0062 27.2 9.2 93 231-325 95-195 (242)
476 COG1091 RfbD dTDP-4-dehydrorha 32.4 1.8E+02 0.0039 29.6 7.7 52 271-322 34-97 (281)
477 PF09419 PGP_phosphatase: Mito 31.4 1.6E+02 0.0034 27.6 6.6 59 261-322 36-111 (168)
478 PRK12724 flagellar biosynthesi 31.3 2.3E+02 0.0049 30.7 8.6 99 228-328 240-346 (432)
479 COG0036 Rpe Pentose-5-phosphat 31.2 5.1E+02 0.011 25.4 11.9 128 231-375 75-214 (220)
480 COG1058 CinA Predicted nucleot 31.2 1E+02 0.0023 30.8 5.7 84 238-325 8-95 (255)
481 COG1748 LYS9 Saccharopine dehy 31.2 3E+02 0.0065 29.4 9.4 107 218-329 3-128 (389)
482 PF08423 Rad51: Rad51; InterP 31.0 1.8E+02 0.0038 29.0 7.4 40 285-324 131-185 (256)
483 PRK10886 DnaA initiator-associ 30.7 3E+02 0.0064 26.3 8.6 41 277-322 101-141 (196)
484 PF00290 Trp_syntA: Tryptophan 30.6 3.1E+02 0.0068 27.5 9.1 83 238-322 113-203 (259)
485 PRK07807 inosine 5-monophospha 30.6 2.6E+02 0.0056 30.8 9.1 112 231-343 230-357 (479)
486 cd07018 S49_SppA_67K_type Sign 30.5 1.9E+02 0.0041 28.0 7.5 87 277-372 36-127 (222)
487 PRK02705 murD UDP-N-acetylmura 30.2 2.9E+02 0.0063 29.7 9.6 76 219-298 3-78 (459)
488 COG0296 GlgB 1,4-alpha-glucan 30.2 45 0.00098 37.7 3.3 39 287-327 199-237 (628)
489 PF15608 PELOTA_1: PELOTA RNA 30.0 1.9E+02 0.0041 24.7 6.2 64 256-325 24-88 (100)
490 PLN02672 methionine S-methyltr 30.0 2.8E+02 0.006 33.8 9.9 117 202-325 427-565 (1082)
491 PF03652 UPF0081: Uncharacteri 29.6 99 0.0021 27.7 4.8 55 274-328 38-99 (135)
492 cd00150 PlantTI Plant trypsin 29.6 24 0.00053 22.3 0.6 15 8-30 1-15 (27)
493 PRK10416 signal recognition pa 29.4 6.5E+02 0.014 26.0 13.6 89 238-327 140-245 (318)
494 KOG1371 UDP-glucose 4-epimeras 29.3 1.3E+02 0.0027 31.4 6.0 68 219-287 4-77 (343)
495 KOG2550 IMP dehydrogenase/GMP 29.2 1.9E+02 0.0042 31.0 7.4 116 227-343 250-381 (503)
496 COG1587 HemD Uroporphyrinogen- 28.5 4.8E+02 0.01 25.5 10.1 107 206-328 41-157 (248)
497 KOG3191 Predicted N6-DNA-methy 28.4 3.9E+02 0.0085 25.6 8.6 95 201-300 27-123 (209)
498 COG0367 AsnB Asparagine syntha 28.3 2.8E+02 0.0061 31.0 9.1 100 217-322 232-337 (542)
499 TIGR02990 ectoine_eutA ectoine 28.1 5.5E+02 0.012 25.4 10.2 99 220-325 102-214 (239)
500 PRK11337 DNA-binding transcrip 28.0 4.6E+02 0.0099 26.3 10.1 43 299-345 196-238 (292)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-80 Score=640.01 Aligned_cols=387 Identities=43% Similarity=0.708 Sum_probs=364.2
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
++.|+++|.|...+ ..+++++||||+||||.|++.++..+.+.+...+|.|+|++||+++.||+++++++|++.++.|
T Consensus 7 ~~~T~~v~~g~~~~--~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 7 SLTTRLVHAGRRPD--DLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccceeeEEcccccc--cCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 57899999997663 4589999999999999999998776666666778999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+|||+||.+++.+++++||+|++++..|++++.++...++++|+++.++|..+.+++++++.+.+|++||+|+|+||+..
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999988888887777436999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhh-hcCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH-VLGG 380 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~-~~G~ 380 (532)
+.|+++|+++|+++|+++||||||++|+.++|+++|+|||++|+|||++||+|+++|+++++. ++.+.+....+ .+|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999888665 55566555444 5999
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009523 381 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 460 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~ 460 (532)
.++|+++|+++|+++|+..||+++++|++.+++||++||.|++|+||++++||+|++++||++|+|+|++|+|+++ +++
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~ 323 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAA 323 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 889
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
.+|+++|+++.+++||||++|++++|+.|+|..++.+.|.+.|+++++||||||+||++|||+||++||+++
T Consensus 324 ~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 324 KKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=2.5e-77 Score=626.00 Aligned_cols=383 Identities=45% Similarity=0.772 Sum_probs=343.0
Q ss_pred cccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 009523 145 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 224 (532)
Q Consensus 145 ~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sS 224 (532)
+|++||+|...++ ..+++++||||+|+||.|++.+++ +.+.+...+|.|+|++||+...||++||+++|++.+++++|
T Consensus 1 ~T~~vh~g~~~~~-~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~S 78 (386)
T PF01053_consen 1 ETLLVHAGRDPDE-DQTGAVNPPIYQSSTFVFDSAEEL-DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSS 78 (386)
T ss_dssp HHHHHHTTTTGGT-STTTBSS--B---SBBBBSSHHHH-HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESS
T ss_pred CcceEeCCCCCCC-CCCCCeeCCccccccCcccchHHH-HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccc
Confidence 4889999987642 358999999999999999999998 77777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc
Q 009523 225 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 304 (532)
Q Consensus 225 G~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~ 304 (532)
||+|+.+++.+++++||+|++++..|++++.+++..+.++|+++.++|..|+++|++++++ +|++||+|+|+||++.+.
T Consensus 79 GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~ 157 (386)
T PF01053_consen 79 GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRP-NTKLVFLESPSNPTLEVP 157 (386)
T ss_dssp HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEESSBTTTTB--
T ss_pred hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccc-cceEEEEEcCCCcccccc
Confidence 9999999999999999999999999999999999889999999999999999999999998 799999999999999999
Q ss_pred CHHHHHHHHHhCC-CEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh--HHHHHHHHHhhhcCCC
Q 009523 305 DVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA 381 (532)
Q Consensus 305 dl~~I~~la~~~g-i~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~~~~~~~G~~ 381 (532)
|+++|+++||++| ++++||+|+++++.++|+.+|+|++++|+|||++||+|+++|+++.++ ++.++++.....+|..
T Consensus 158 Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~ 237 (386)
T PF01053_consen 158 DLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT 237 (386)
T ss_dssp -HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B
T ss_pred cHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc
Confidence 9999999999998 999999999999999999999999999999999999999999999765 7888899888999999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
++|+++|+++++++|+..||+++.+|+++++++|++||.|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+.
T Consensus 238 ~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~ 317 (386)
T PF01053_consen 238 LSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAAR 317 (386)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHH
T ss_pred chHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997656899
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+|+++|+++.+++|||+++|++++|+.++|..+++++++..|+++++||||+|+||++|||+||++||+
T Consensus 318 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 318 RFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred hHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-77 Score=596.32 Aligned_cols=386 Identities=38% Similarity=0.623 Sum_probs=365.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+|+|++||+|+. + +.+++...|||+|++|.|++.++..+.|..+..+|.|+|..||+.+.||++||.++|+-.++.+
T Consensus 7 ~f~T~~vHag~~-d--~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 7 GFETLAVHAGQE-D--PTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred CcchhhhcCCCC-C--CCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 589999999987 3 4689999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+|||+|+..++..++++||+||.+...|++++.++...++++|++++++|.+|++++++++++ +||+||+|+..||-+.
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~-nTkavf~EtigNP~~~ 162 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDE-NTKAVFAETIGNPGLD 162 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCc-ccceEEEEeccCCCcc
Confidence 999999999999999999999999999999999999899999999999999999999999998 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh--H--------------
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--K-------------- 366 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~-------------- 366 (532)
+.|+++|+++||++|+++|||+|+++++.++|+++|+|||++|+|||+||||..+||+++-.. +
T Consensus 163 v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~ 242 (426)
T COG2873 163 VLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPD 242 (426)
T ss_pred ccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997311 0
Q ss_pred ----------------HHHHHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009523 367 ----------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 429 (532)
Q Consensus 367 ----------------li~~l~-~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl 429 (532)
++-+.| ...+.+|.+++|+++|+.+.|++||.+||+|+++|+.++++||++||+|.+|+||+|
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL 322 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGL 322 (426)
T ss_pred ccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCC
Confidence 111222 345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009523 430 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 508 (532)
Q Consensus 430 ~s~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~ 508 (532)
++||.|.++++++ +|.|++++|+++++.+...+|+++|+++....+.|++.|++.||++++|+.++++++.++|+++++
T Consensus 323 ~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~ 402 (426)
T COG2873 323 ASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDL 402 (426)
T ss_pred CCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCc
Confidence 9999999999999 789999999999988999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhhC
Q 009523 509 VRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 509 IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
||+|||+||++|+|+||+|||+++
T Consensus 403 IRlSVGIEd~~DiiaDl~qAl~~~ 426 (426)
T COG2873 403 IRLSVGIEDIDDIIADLEQALEAA 426 (426)
T ss_pred EEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999863
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3.6e-73 Score=595.78 Aligned_cols=383 Identities=27% Similarity=0.457 Sum_probs=351.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhccc-CCCCCCCCCchhHHHHHHHHHhhhCCCcEEE
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 221 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~ 221 (532)
+++|+++|.|... ...+++++||||+|+||.|++.+++.+.+.++. .+|.|+|.+||+++.||++||+++|++.+++
T Consensus 5 ~~~t~~~~~~~~~--~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~ 82 (395)
T PRK08114 5 KLDTQLVNAGRSK--KYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCAL 82 (395)
T ss_pred CcchheEeCCCCC--CCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Confidence 3679999999532 223489999999999999999998887775443 4699999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC
Q 009523 222 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 301 (532)
Q Consensus 222 ~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG 301 (532)
|+|||+|+++++.+++++||+||+++..|++++.+++..++++|+++.+++..|.+++++++++ +||+|++|+|+||+|
T Consensus 83 ~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~-~TrlV~~EtpsNp~~ 161 (395)
T PRK08114 83 YPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQP-NTKVVFLESPGSITM 161 (395)
T ss_pred EhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCC
Confidence 9999999999999999999999999999999999988888999999999999999999999987 799999999999999
Q ss_pred cccCHHHHHHHHHhCC--CEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcC
Q 009523 302 RCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 379 (532)
Q Consensus 302 ~v~dl~~I~~la~~~g--i~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G 379 (532)
.+.|+++|+++||++| ++++||+||+.++.++|+++|+|++++|+|||++||+|+++|+++.++++++.++......|
T Consensus 162 ~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G 241 (395)
T PRK08114 162 EVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMG 241 (395)
T ss_pred EeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhcc
Confidence 9999999999999984 99999999999988999999999999999999999999999999888888888887778889
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CH
Q 009523 380 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DL 457 (532)
Q Consensus 380 ~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g--~~ 457 (532)
..++|+++|+++|+++|+..||+++++|+..+++||++||.|.+|+||++++||+|+++++|++|+|+|++|++++ +.
T Consensus 242 ~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~ 321 (395)
T PRK08114 242 QMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTD 321 (395)
T ss_pred CCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 36
Q ss_pred HHHHHHHHHcCCCceeecCCCcccccc--cCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVD--QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~--~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+++.+|+++|+++.+++|||+++|+++ +|..++|.. +++ ..|+.+++||||||+||++|||+||++||+++
T Consensus 322 ~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 322 EQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHHhCCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 789999999999999999999999999 555555544 333 45677799999999999999999999999864
No 5
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.5e-72 Score=590.97 Aligned_cols=379 Identities=32% Similarity=0.531 Sum_probs=353.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|.|..++ ..+++++||||+|+||.|++.. +..+|.|+|++||+.+.|+++||+++|++.++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt 74 (388)
T PRK08861 5 KPATIAVRTGIESD--SQYHAVVPPIYLSTNYGFPAFG--------EVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVT 74 (388)
T ss_pred CcccceeECCCCCC--CCCCCccCCcccCcceEeCCcC--------ccCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 47899999996543 2368999999999999998742 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+.+++.+++++||+|+++.+.|++++..+...+...|+++.+++..|++++++++++ +|++|++|+|+||||.
T Consensus 75 ~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~-~tklV~lesP~NPtG~ 153 (388)
T PRK08861 75 NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAK-KPKLILLETPSNPLVR 153 (388)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999998887776666677899999998899999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~ 381 (532)
+.|+++|.++|+++|+++|+|++|+.++.+.|+++|+|++++|+|||++||+|+++|+++++ +++.++++.++...|..
T Consensus 154 v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~ 233 (388)
T PRK08861 154 VVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT 233 (388)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999888889999999999999999999999999999875 56778888888888999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
++|+++|+++++++|+..||+++++|+.++++||++||.|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+.
T Consensus 234 ~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~ 313 (388)
T PRK08861 234 GTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLK 313 (388)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987678889
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+|+++|+++.+++|||+++|++++|+.++|+.+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 314 ~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 314 VFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred HHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999853
No 6
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-72 Score=575.71 Aligned_cols=389 Identities=43% Similarity=0.658 Sum_probs=363.4
Q ss_pred ccCCCccccccccCCcCCCCCCCCcccCCcccccccccCCh-HHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCC
Q 009523 139 SFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKT-AELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE 217 (532)
Q Consensus 139 ~~~~~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~-~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~ 217 (532)
++..+++|.++|+|+.+++. ..++++||||.++++.|... .+.+...+. .+|.|+|.+||+...|++.+++++|++
T Consensus 17 ~~~~~~~t~~~~~g~~~~~~-~~~~v~~pI~~~~s~tfk~~~~~~~~~~~~--~~~~Ysr~~nPt~~~le~~iaal~ga~ 93 (409)
T KOG0053|consen 17 SRLSHLDTNLLHAGQDPEKA-IHNAVAPPIYATLSTTFKQDLNEGEHGGNL--DGYDYSRSGNPTRDVLESGIAALEGAA 93 (409)
T ss_pred hhccccchhhhhcccccchh-ccccccCceecccceeecccCccccccccc--cccccccCCCCchHHHHHHHHHHhCCc
Confidence 34467999999999887543 57899999998888888765 332222211 269999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC
Q 009523 218 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 297 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~ 297 (532)
.+++++|||.|+..++..++++|++|++.+..|++|..+++..++++|++..++|.+|++.+++++++ +|++||+|+|+
T Consensus 94 ~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPs 172 (409)
T KOG0053|consen 94 HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPS 172 (409)
T ss_pred eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhcc-CceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 79999999999
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhh
Q 009523 298 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH 376 (532)
Q Consensus 298 NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~ 376 (532)
||++.+.||++|+++||++|+++|||+||++++.++|+.+|||||++|+|||++||+|+++|+++.+ +++..+++..+.
T Consensus 173 NPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~ 252 (409)
T KOG0053|consen 173 NPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE 252 (409)
T ss_pred CCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 789999999999
Q ss_pred hcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC
Q 009523 377 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 456 (532)
Q Consensus 377 ~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~ 456 (532)
..|++++|+.+|+..|+++|+..|++++.+|+..++++|+++|.+++|+||+|++||+|++++++++|.+|.++|.+.++
T Consensus 253 ~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~ 332 (409)
T KOG0053|consen 253 DLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGN 332 (409)
T ss_pred HhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777788888888
Q ss_pred HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 457 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 457 ~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
.+.+.+|+++|+++..++|+|+++||+++|+.|+|+. +.+++.+.|+++++||+|||+||.+|+|+||.+||+++
T Consensus 333 ~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 333 EEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKA 407 (409)
T ss_pred HHHHHHHHHhhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999999999999999 99999999999999999999999999999999999863
No 7
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.4e-71 Score=590.11 Aligned_cols=383 Identities=30% Similarity=0.514 Sum_probs=354.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|... .. +++++||||+|+||.|++.+++...++....+|.|+|.+||+++.||+.+|+++|++.+++++
T Consensus 7 ~~t~~~~~g~~~--~~-~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~~ 83 (432)
T PRK06702 7 KGTICVQGGYTP--KN-GEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVATA 83 (432)
T ss_pred cchHheeCCCCC--CC-CCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEEC
Confidence 689999999633 22 689999999999999999988877766555689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
|||+|+.+++.+++++||+||++.+.|+++..++...+..+|+++++++.. |+++++++|++ +||+|++|+|+||++.
T Consensus 84 SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~ 162 (432)
T PRK06702 84 SGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMN 162 (432)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCcccc
Confidence 999999999999999999999999999999988877778899999999984 89999999998 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChH----------H-----
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK----------L----- 367 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~----------l----- 367 (532)
+.|+++|+++|+++|+++|+|+||++|+.++|+++|+||+++|+|||++||+++++|+++.... +
T Consensus 163 v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 163 VLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999884221 1
Q ss_pred ----------------HHHHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009523 368 ----------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 430 (532)
Q Consensus 368 ----------------i~~l~-~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~ 430 (532)
+.+.+ .....+|.+++|+++|+++++++++..|++++.+|+.+++++|+++|.|.+|+||+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~ 322 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLD 322 (432)
T ss_pred cccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 11122 3455678999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009523 431 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 509 (532)
Q Consensus 431 s~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~I 509 (532)
+||+|+++++|| +|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++.+|+.++|..+++++++..|+++++|
T Consensus 323 ~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~li 402 (432)
T PRK06702 323 SNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLI 402 (432)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeE
Confidence 999999999999 7899999999987778889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHh
Q 009523 510 RFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 510 RlSvG~ed~~dli~dL~~AL~ 530 (532)
|||||+||++|||+||+|||+
T Consensus 403 RlSvGlEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 403 RLSVGIEDVSDIIADLEAALV 423 (432)
T ss_pred EEEeccCCHHHHHHHHHHHHh
Confidence 999999999999999999996
No 8
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.9e-71 Score=582.74 Aligned_cols=382 Identities=29% Similarity=0.521 Sum_probs=350.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhccc-CCCCCCCCCchhHHHHHHHHHhhhCCCcEEE
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 221 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~ 221 (532)
+++|+++|.|... ...+++++||||+|+||.|++.+++.+.+.+.. .+|.|+|++||+...||++||++++++++++
T Consensus 4 ~~~t~~~~~~~~~--~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 4 KKATKIVSAGRDK--KWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred CccceeEEcCCCC--CCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 3679999999433 223489999999999999999988776554332 4589999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC
Q 009523 222 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 301 (532)
Q Consensus 222 ~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG 301 (532)
++|||+|+..++.+++++||+||++++.|+++..++...++++|+++.+++..+.+++++++++ +||+|++|+|+||+|
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~-~TklV~lespsNPtg 160 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRP-NTKVLFLESPGSITM 160 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCC
Confidence 9999999999999999999999999999999988777777889999999988888999999987 799999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC
Q 009523 302 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA 381 (532)
Q Consensus 302 ~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~ 381 (532)
.+.|+++|+++||++|+++++|++|++++.++|+++|+|++++|+|||++||+|+++|+++.+++++++++......|.+
T Consensus 161 ~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~ 240 (394)
T PRK09028 161 EVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQC 240 (394)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999998899999999999999999999999999999988888888888777788999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc-CCHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-GDLTAT 460 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~-g~~~~~ 460 (532)
++|+++|+++|+++|+..||+++++|++.+++||++||.|.+|+||++++||+|+++++|++|+|+|++|+++ ++.+.+
T Consensus 241 ~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~ 320 (394)
T PRK09028 241 TSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAV 320 (394)
T ss_pred CCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 456788
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.+|+++|+++.+++|||+++|++.+|++++|... .+..|+.+++||||||+||++|||+||++||++
T Consensus 321 ~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 321 TALVEGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFER 387 (394)
T ss_pred HHHHHhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876543 234788889999999999999999999999974
No 9
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.6e-70 Score=580.49 Aligned_cols=386 Identities=40% Similarity=0.658 Sum_probs=362.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
++.|+++|+|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+++.||++||+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 85 (398)
T PRK08249 8 GVGTKAVWAGEKEY--LPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAF 85 (398)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 36799999996542 2368999999999999999998777666555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+..++.+++++||+|+++.+.|+++...+...++..|+++.+++..|++++++++++ +|++|++|+|+||+|.
T Consensus 86 ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~-~tklV~ie~p~NPtg~ 164 (398)
T PRK08249 86 STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAK-GCDLLYLETPTNPTLK 164 (398)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999887777677888999999999999999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCc
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~ 382 (532)
+.|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++||++.++|+++++++++++++..+...|..+
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM 244 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998877777888999999999999999999999999999999999988888889999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
+++.+|+++++++++..|++++.+|++.++++|+++|.|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+.+
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~ 324 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKR 324 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|+++|+++.+++|||+++|++++|+.++|..++++.++..|+++++||||||+||++|||+||++||+.
T Consensus 325 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 325 LLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAH 393 (398)
T ss_pred HHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
No 10
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.6e-70 Score=576.24 Aligned_cols=376 Identities=32% Similarity=0.545 Sum_probs=345.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.. ...+|.|+|.+||+.+.|++.|+.+++++.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sst~~~~~~~~~~~----~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~s 86 (395)
T PRK05967 13 INTRLAHDGNDPG--DYHGFVNPPVVHASTVLFPDAETMAT----RGQKYTYGTRGTPTTDALCKAIDALEGSAGTILVP 86 (395)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCChHHhhc----ccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEEC
Confidence 6799999996542 33689999999999999999887642 23579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
|||+|+..++.+++++||+||++++.|+++..++...++++|+++++++..+.+++++++++ +||+|++|+|+||++.+
T Consensus 87 SG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~-~TklV~lesPsNP~l~v 165 (395)
T PRK05967 87 SGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRP-NTKVVHTEAPGSNTFEM 165 (395)
T ss_pred cHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCcH
Confidence 99999999999999999999999999999988877788999999999998888899999988 69999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCcc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 383 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~ 383 (532)
.|+++|+++|+++|+++|+|++|++++.++|+++|+|++++|++||++||+|+++|+++++++.+++++......|..++
T Consensus 166 ~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~ 245 (395)
T PRK05967 166 QDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAG 245 (395)
T ss_pred HHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998888888888777778899999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHH
Q 009523 384 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTA 459 (532)
Q Consensus 384 ~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~ 459 (532)
|+++|+++++++|+..||+++.+|+..+++||++||.|.+|+||+|++||+|+++++|++|+|+|++|+++++ .+.
T Consensus 246 p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~ 325 (395)
T PRK05967 246 PDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAK 325 (395)
T ss_pred HHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999843 678
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+.+|+++|+++.+++|||+++|+++|+ .+ +.+.+...|+.+++||||||+||++|||+||++||+++
T Consensus 326 ~~~f~~~l~l~~~~~slG~~~sLi~~~-~~-----~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 326 AHAFLDALEIFGLGYSWGGYESLALHV-KL-----GDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAA 392 (395)
T ss_pred HHHHHHhCCcceEccCCCCcceeeeeC-CC-----ChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 899999999999999999999999874 33 33344446888899999999999999999999999853
No 11
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.3e-69 Score=578.12 Aligned_cols=386 Identities=35% Similarity=0.586 Sum_probs=356.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|.++|+...|+++||+++|++.+++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~~ 86 (431)
T PRK08248 9 LETLAIHAGQEID--PTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAVS 86 (431)
T ss_pred cchhheeCCcCCC--CCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996542 33689999999999999999998888776555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+..++.+++++||+|+++++.|++++..+...++..|+++++++..|++++++++++ ++++|++++|+||||.+
T Consensus 87 sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~-~tklV~l~sp~NPtG~v 165 (431)
T PRK08248 87 SGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITD-KTKALFAETIGNPKGDV 165 (431)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999988887778889999999999999999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHH----------------
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 367 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l---------------- 367 (532)
.|+++|+++|+++|+++|+|++++.+..+.++++|+|++++|+||+++|||+++||+++.+.+.
T Consensus 166 ~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~ 245 (431)
T PRK08248 166 LDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDP 245 (431)
T ss_pred cCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCcc
Confidence 9999999999999999999999998887888899999999999999999999999988864321
Q ss_pred -----------------HHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009523 368 -----------------VTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 430 (532)
Q Consensus 368 -----------------i~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~ 430 (532)
....+.....+|..++|+++|+++++++|+..|++++.+|+.+++++|++||+|.+|+||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 325 (431)
T PRK08248 246 SYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLP 325 (431)
T ss_pred ccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 112223456779999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009523 431 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 509 (532)
Q Consensus 431 s~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~I 509 (532)
+||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|++++|+.+++++++.+|+++++|
T Consensus 326 s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 405 (431)
T PRK08248 326 SHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLV 405 (431)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeE
Confidence 999999999999 6889999999987778899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHhhC
Q 009523 510 RFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 510 RlSvG~ed~~dli~dL~~AL~~l 532 (532)
|||||+||++|||+||+|||+++
T Consensus 406 RlsvGlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 406 RLSVGTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred EEEeccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999853
No 12
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.6e-69 Score=569.04 Aligned_cols=380 Identities=33% Similarity=0.553 Sum_probs=352.7
Q ss_pred CCccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE
Q 009523 142 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 221 (532)
Q Consensus 142 ~~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~ 221 (532)
++++|+++|.|...+ ..+++++||||+|+||.|++.++ ..+|.|+||+||+.+.|+++||+++|++++++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~--------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 3 RKQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFNE--------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred CCcccceeEcCCCCC--CCCCCccCCccCCcceecCCccc--------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 457899999996542 23689999999999999988542 24699999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC
Q 009523 222 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 301 (532)
Q Consensus 222 ~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG 301 (532)
++||++|+..++.+++++||+|+++++.|++++..+.......|+++.+++..|++++++++++ ++++|++|+|+||||
T Consensus 73 ~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~-~tklV~l~sP~NPtG 151 (386)
T PRK08045 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLL 151 (386)
T ss_pred ECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhccc-CCeEEEEECCCCCCC
Confidence 9999999999999999999999999999998887776666667788888888899999999987 799999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCC
Q 009523 302 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 380 (532)
Q Consensus 302 ~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~ 380 (532)
.+.|+++|.++|+++|+++|+|++|+.+....++.+|+|++++|+|||++|++++++|+++. +++++++++..+...|.
T Consensus 152 ~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~ 231 (386)
T PRK08045 152 RVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV 231 (386)
T ss_pred EecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999887788899999999999999999999999999877 56788888888888899
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009523 381 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 460 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~ 460 (532)
+++++++|+++++++++..|++++.+|++.++++|++||.|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+
T Consensus 232 ~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~ 311 (386)
T PRK08045 232 TGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTL 311 (386)
T ss_pred CCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777778
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
.+|+++|+++.+++|||+++|++++|++++|+.++++.+.+.|+++++||||||+||++|||+||++||+++
T Consensus 312 ~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 312 RRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred HHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999863
No 13
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=4.9e-69 Score=568.31 Aligned_cols=386 Identities=37% Similarity=0.624 Sum_probs=359.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+++.||++||+++|++.+++++
T Consensus 4 ~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~ 81 (391)
T TIGR01328 4 FATRAIHAGYPPK--DQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATS 81 (391)
T ss_pred cccceeeCCccCC--CCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996542 23689999999999999999988887776656689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+.+++.+++++||+|+++.+.|++++..+...+..+|+++.++|.+|++++++++++ +|++|++|+|+||+|.+
T Consensus 82 sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~-~tklV~le~p~Np~G~v 160 (391)
T TIGR01328 82 SGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKD-NTKIVYFETPANPTMKL 160 (391)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhcc-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999888787778889999999999999999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCC
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA 381 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~ 381 (532)
.|+++|.++|+++|+++|+|++++.++...++..|+|++++|+||++++++++++|+++++++++++++... ...|..
T Consensus 161 ~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~ 240 (391)
T TIGR01328 161 IDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSV 240 (391)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999887778888999999999999999999988999999999998887532 245778
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
+++..+|+++++++++..|++++.+|+++++++|+++|.|..|+||++++||+|+++++|++|+|+|++|+++++.+.+.
T Consensus 241 l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 320 (391)
T TIGR01328 241 ISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAK 320 (391)
T ss_pred CCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987677889
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+|+++|+++.+++|||+++|++++|.+++|..+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 321 ~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 321 KLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 14
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.8e-69 Score=573.27 Aligned_cols=385 Identities=35% Similarity=0.560 Sum_probs=353.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.++....+|.|+|+++|+.+.||++||+++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~s 91 (436)
T PRK07812 14 FETKQIHAGQTPD--PATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLA 91 (436)
T ss_pred cchhheeCCCCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEc
Confidence 6799999995442 23689999999999999999988877776555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC-CCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd-~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
|||+|+.+++.+++++||+||++...|++++..+...+++.|+++.+++ ..|++++++++++ +|++|++|+|+||+|.
T Consensus 92 SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~-~tklV~ie~~sNp~G~ 170 (436)
T PRK07812 92 SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRP-NTKAFFAETISNPQID 170 (436)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCC-CCeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998877767788899999995 6689999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChH----------------
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 366 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~---------------- 366 (532)
+.|+++|.++||++|+++|||++++.++.++++.+|+|++++|+||++||||++++|+++.+..
T Consensus 171 v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~ 250 (436)
T PRK07812 171 VLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDP 250 (436)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCc
Confidence 9999999999999999999999999988889999999999999999999999999999886331
Q ss_pred --------------HHHHHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Q 009523 367 --------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 431 (532)
Q Consensus 367 --------------li~~l~-~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s 431 (532)
++.+++ ......|..++|+++|+++++++|+..|++++++|+.+|+++|++||+|.+|+||++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s 330 (436)
T PRK07812 251 SYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPS 330 (436)
T ss_pred ccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111222 34557899999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009523 432 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 510 (532)
Q Consensus 432 ~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IR 510 (532)
||+|+++++|+ +|+|+|++|+++++.+.+.+|+++|+++.+++|||+++||+++|+.++|+.+++++++.+|+++++||
T Consensus 331 ~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liR 410 (436)
T PRK07812 331 SPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVR 410 (436)
T ss_pred CccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 78999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHhh
Q 009523 511 FSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 511 lSvG~ed~~dli~dL~~AL~~ 531 (532)
||||+||++|||+||++||++
T Consensus 411 lSvGlEd~~dli~dl~~Al~~ 431 (436)
T PRK07812 411 LAVGIEGIDDILADLEAGFAA 431 (436)
T ss_pred EEeccCCHHHHHHHHHHHHHh
Confidence 999999999999999999985
No 15
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.8e-69 Score=574.21 Aligned_cols=386 Identities=32% Similarity=0.480 Sum_probs=353.2
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|+|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|.++|+++.+|+++|+++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fs 91 (437)
T PRK05613 14 FETRSIHAGQSVD--SDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFA 91 (437)
T ss_pred cchHheeCCCCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeC
Confidence 6799999996542 23689999999999999999988777665455679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC-CCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd-~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
|||+|+.+++.+++++||+||+++..|+++...+...+++.|+++++++ ..|++++++++++ +|++|++++++||+|.
T Consensus 92 SG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~-~tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 92 SGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQP-NTKAFFGETFANPQAD 170 (437)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCc-cCeEEEEECCCCCCCc
Confidence 9999999999999999999999999999997777677788999999997 5689999999988 6999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHH---------------
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------------- 367 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l--------------- 367 (532)
+.|+++|+++|+++|+++|+|++++.+..++++++|+|++++|+||+++|||+.+||+++.+.++
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~ 250 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYF 250 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCC
Confidence 99999999999999999999999988877899999999999999999999999999998864220
Q ss_pred --------------------H-HHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009523 368 --------------------V-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 426 (532)
Q Consensus 368 --------------------i-~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~ 426 (532)
+ +.........|.+++|+++|+++++++|+..||+++++|+.+++++|++||+|.+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 251 VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 1 1122355678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCC
Q 009523 427 PGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 505 (532)
Q Consensus 427 Pgl~s~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~ 505 (532)
|++++||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|++++|+.++++.++.+|++
T Consensus 331 Pgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~ 410 (437)
T PRK05613 331 AGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGIT 410 (437)
T ss_pred CCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCC
Confidence 9999999999999997 789999999998777889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 506 DNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 506 ~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+++||||||+||++|||+||++||+++
T Consensus 411 ~~liRlsvGlE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 411 QATVRLSVGIEDIDDIIADLEGGFAAI 437 (437)
T ss_pred CCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999864
No 16
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2e-68 Score=568.83 Aligned_cols=386 Identities=33% Similarity=0.568 Sum_probs=353.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|++++||+++|+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~~ 85 (433)
T PRK08134 8 GFDTLALHAGAAPD--PATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIAT 85 (433)
T ss_pred CcchhheeCCCCCC--CCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 36799999996542 3368999999999999999998888777655668999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+|||+|+++++.+++++||+||++...|+++..++...+++.|++++++|.+|++++++++++ +||+|++++|+||+|.
T Consensus 86 sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~-~TklV~~e~~~np~g~ 164 (433)
T PRK08134 86 ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRP-NTRLLFGETLGNPGLE 164 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCcccCc
Confidence 999999999999999999999999999999988876667789999999999899999999988 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChH----------------
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 366 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~---------------- 366 (532)
+.|+++|+++||++|+++|+|+++++++.+.++++|+|++++|+||+++|||+++||+++....
T Consensus 165 v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 244 (433)
T PRK08134 165 VLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPY 244 (433)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCc
Confidence 9999999999999999999999999998888999999999999999999999999998874211
Q ss_pred ----------------HHHHH-HHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009523 367 ----------------LVTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 429 (532)
Q Consensus 367 ----------------li~~l-~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl 429 (532)
+..+. ......+|..++++++|+++++++++..|++++.+|+.+++++|+++|.|.+|+||++
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l 324 (433)
T PRK08134 245 AGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPEL 324 (433)
T ss_pred ccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00111 1233567889999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009523 430 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 508 (532)
Q Consensus 430 ~s~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~ 508 (532)
++||+|+++++++ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|+.++|..+++++++..|+++++
T Consensus 325 ~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~l 404 (433)
T PRK08134 325 ESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGT 404 (433)
T ss_pred CCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCe
Confidence 9999999999999 789999999998777788999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009523 509 VRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 509 IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
||||||+||++|||+||+|||++
T Consensus 405 iRlsvGlE~~~dli~dl~~Al~~ 427 (433)
T PRK08134 405 IRLSIGLEDADDLIDDLKRALKA 427 (433)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 17
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.7e-68 Score=568.78 Aligned_cols=385 Identities=35% Similarity=0.563 Sum_probs=352.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.+.||++||+++|++.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~s 80 (425)
T PRK06084 3 LETLAIHAGYSPD--PTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVA 80 (425)
T ss_pred cchhheeCCcCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEeh
Confidence 5689999985442 23689999999999999999988887776555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
|||+|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|++++++++++ ++++|++|+|+||+|.+
T Consensus 81 sG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~-~tklV~lesp~NPtG~v 159 (425)
T PRK06084 81 SGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDE-RTKAVFCESIGNPAGNI 159 (425)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhcc-CCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999999888776667778999999999999999999987 69999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHH--H-------------
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--V------------- 368 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l--i------------- 368 (532)
.|+++|.++|+++|+++|+|++++.+...+++.+|+|++++|+||+++||++++||+++.+..+ .
T Consensus 160 ~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 239 (425)
T PRK06084 160 IDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPD 239 (425)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCC
Confidence 9999999999999999999999999888889999999999999999999999999999864321 0
Q ss_pred ------------------HH-HHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009523 369 ------------------TQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 429 (532)
Q Consensus 369 ------------------~~-l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl 429 (532)
.. .......+|..++|+++|+++++++++..|++++.+|+++++++|++||+|.+|+||++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00 11223467899999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhcCC-cccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009523 430 KSHPEHHIATQQMTG-FGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 508 (532)
Q Consensus 430 ~s~p~~~l~~~~~~g-~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~ 508 (532)
++||+|.++++|+.| +|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|..++|..++++++++.|+++++
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~l 399 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDM 399 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCe
Confidence 999999999999987 8999999998776778999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009523 509 VRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 509 IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
||||||+||++|||+||++||++
T Consensus 400 iR~svGlEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 400 VRLSIGIEHIDDIIADLAQALDA 422 (425)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 18
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=3.5e-68 Score=563.41 Aligned_cols=383 Identities=36% Similarity=0.575 Sum_probs=357.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|+|...+ .+++++||||+++||.|++.+++.+.+.+...+|.|+||+||+.+.||++||+++|+++++++
T Consensus 15 ~~~t~~~~~~~~~~---~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~ 91 (403)
T PRK07810 15 SQATIGVRGGLLRS---GFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFAT 91 (403)
T ss_pred CcchhheeCCCCCC---CCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 36799999995432 368899999999999999998877766555567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+|||.|+..++.+++++||+|++++..|++++..+...++..|+++++++..|++++++++++ +|++|++|+|+||+|.
T Consensus 92 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~~esp~Nptg~ 170 (403)
T PRK07810 92 ASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSV-PTQAVFFETPSNPMQS 170 (403)
T ss_pred CChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCe
Confidence 999999999999999999999999999999988887778889999999999999999999987 6999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHH-HHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~G~~ 381 (532)
+.|+++|+++|+++|+++|+|++|+.++..+++..|+|++++|++|+++|||+++||+++++++.+. +++.+....|..
T Consensus 171 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~ 250 (403)
T PRK07810 171 LVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 250 (403)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988888889999999999999999999999999999887664 566666778889
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----CH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DL 457 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g----~~ 457 (532)
++++.+|+++++++++..|++++.+|+.+++++|+++|+|.+|+||++++||+|+++++|++|+|+|++|++++ +.
T Consensus 251 ~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~ 330 (403)
T PRK07810 251 LSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAK 330 (403)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 46
Q ss_pred HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
+.+.+|+++|+++.+++|||+.+|++++|+.++|..++.+.+...|+++++||||+|+|+++|||+||++||
T Consensus 331 ~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 331 KRAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred HHHHHHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 778999999999999999999999999999999999999999999999999999999999999999999998
No 19
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=1.5e-67 Score=555.20 Aligned_cols=378 Identities=34% Similarity=0.593 Sum_probs=350.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
.++|+++|.|...+ ..+++++||||++++|.|++.. +..+|.|+||+||+.+.|+++||+++|++.++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 3 KQATIAVRSGLNSD--TQYGCVVPPIYLSTTYNFTGFN--------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred CcccceeecCCCCC--CCCCCccCCeeCCceeEeCCcC--------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 47899999996542 2368999999999999987532 1236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+.+++.+++++||+|+++.+.|++++..+...+...++++.+++..|++++++++++ +||+|++|+|+||||.
T Consensus 73 ~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~ 151 (382)
T TIGR02080 73 NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLR 151 (382)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCE
Confidence 999999999999999999999999999999888776666677889998888899999999987 6999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 381 (532)
+.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|+||+++|++++++|+++. +++++++++.++...|..
T Consensus 152 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~ 231 (382)
T TIGR02080 152 VVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT 231 (382)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999887777888899999999999999999999999876 567888888888888999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
++|+.+|+++++++++..|++++.+|+..+++||++||.|.+|+||++++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 232 ~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~ 311 (382)
T TIGR02080 232 GGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVR 311 (382)
T ss_pred CCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987667788
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+|+++|+++.+++|||+++|++++|++++|..+++++++..|+++++||||||+||++|||+||++||++
T Consensus 312 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 312 RFLGGLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRA 381 (382)
T ss_pred HHHHcCCcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 20
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=1.8e-67 Score=556.45 Aligned_cols=384 Identities=36% Similarity=0.620 Sum_probs=359.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|... ..++++.+|||++++|.|++.++....+.+...+|.|+|+++|+.++||+++|+++|++++++++
T Consensus 7 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~s 83 (390)
T PRK08133 7 FDTLAVRAGQLR---SPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATA 83 (390)
T ss_pred cchhheeCCCCC---CCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 679999999643 23688999999999999999887766655445578999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+..++.+++++||+||++++.|++++..+...++..|+++++++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 84 sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~ie~p~NptG~v 162 (390)
T PRK08133 84 SGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRP-NTKLFFLETPSNPLTEL 162 (390)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCCc
Confidence 99999999999999999999999999999988877777889999999999999999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCcc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 383 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~ 383 (532)
.|+++|.++|+++|+++|+|++++.+....++..|+|++++|+||+++|+++++||++++++++++++.......|..++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~ 242 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLS 242 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999888777888889999999999999999999999999999888888877778898999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHH
Q 009523 384 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 463 (532)
Q Consensus 384 ~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~ 463 (532)
+..+|+++++++++..|++++.+|+..++++|+++|.|.+|+||+++++|+|+++++|+.|+|+|++|+++++.+.+.+|
T Consensus 243 ~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f 322 (390)
T PRK08133 243 PFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRV 322 (390)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777788999
Q ss_pred HHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 464 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 464 l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+++|+++.+++|||+++|++++|++++|..++++.++.+|+++++||||||+||.+|||+||++||+.
T Consensus 323 ~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 323 IDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred HHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999973
No 21
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=2.2e-67 Score=560.89 Aligned_cols=386 Identities=33% Similarity=0.550 Sum_probs=352.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhc----------ccCCCCCCCCCchhHHHHHHHHHhh
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEK----------RRASFEYGRYGNPTTVVVEEKMSAL 213 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~----------~~~~~~Y~R~~~p~~~~Le~~lA~l 213 (532)
+.|.++|.|..++ ..+++++||||+|+||.|++.+++.+.+.. ...+|.|+||+||+...|+++||++
T Consensus 18 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 18 PETQMLNYGYDPE--LSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 5789999985432 236899999999999999999887765422 1346999999999999999999999
Q ss_pred hCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE-EEEeCCCCHHHHHHhhc----CCCe
Q 009523 214 EGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPADMEGLEAALN----NNNV 288 (532)
Q Consensus 214 ~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~-v~~vd~~dle~Le~al~----~~~t 288 (532)
+|.+++++++||++|+.+++.+++++||+|+++.+.|+++...+...++.+|++ +.+.+..|+++++++++ ..++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 999999999999999999999999999999999999999887766667788998 45555667888887764 2369
Q ss_pred eEEEEeCCCCCCCcccCHHHHHHHHHh------CCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEE
Q 009523 289 SLFFTESPTNPFLRCVDVKLVSDLCHK------KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 362 (532)
Q Consensus 289 klV~lesP~NptG~v~dl~~I~~la~~------~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv 362 (532)
++||+|+|+||||.+.|+++|.+++++ +++++|+||+|.+++...++..|+|++++|+||+++|++++++|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999987 79999999999888777888889999999999999999999999999
Q ss_pred eChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC--CCCchhhhHhh
Q 009523 363 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL--KSHPEHHIATQ 440 (532)
Q Consensus 363 ~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl--~s~p~~~l~~~ 440 (532)
+++++++.++..+..+|..++++.+|+++++++++..|++++.+|++.++++|+++|+|.+|+||++ ++||+|+++++
T Consensus 256 ~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~ 335 (427)
T PRK07049 256 GRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKR 335 (427)
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHh
Confidence 9999999999888888999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred hcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009523 441 QMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 520 (532)
Q Consensus 441 ~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~d 520 (532)
||.|+|+|++|+++++.+.+.+|+++|+++.+++|||+++||+++|..++|..++++++...|+++++||||||+||++|
T Consensus 336 ~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~d 415 (427)
T PRK07049 336 QCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHPDD 415 (427)
T ss_pred hCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHH
Confidence 99999999999998777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 009523 521 LKADVLQALHA 531 (532)
Q Consensus 521 li~dL~~AL~~ 531 (532)
||+||++||++
T Consensus 416 l~~dl~~al~~ 426 (427)
T PRK07049 416 LIADLAQALDA 426 (427)
T ss_pred HHHHHHHHHhc
Confidence 99999999975
No 22
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=3.1e-67 Score=555.82 Aligned_cols=385 Identities=36% Similarity=0.591 Sum_probs=356.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|... ..++++.+|||++++|.|++.+++.+.+.+...+|.|+||++|+...||++||+++|++.+++++
T Consensus 11 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~ 87 (398)
T PRK07504 11 PATRLVHSGTLR---SQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATA 87 (398)
T ss_pred cccceeeCCCCC---CCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEec
Confidence 679999999632 23678999999999999999887766665555689999999999999999999999999899999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||+.|+..++.+++++||+|+++++.|+++...+...++..|+++++++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 88 sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~-~tklV~lesp~NptG~v 166 (398)
T PRK07504 88 SGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRP-NTKVFFLESPTNPTLEV 166 (398)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCcEe
Confidence 99999998888889999999999999999887776667788999999998899999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHH-HHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~G~~~ 382 (532)
.|+++|.++|+++|+++|+|++|+.++...+..+|+|++++|+||+++|+|+.+||+++++++++. .++......|..+
T Consensus 167 ~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~ 246 (398)
T PRK07504 167 IDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL 246 (398)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999887778888899999999999999999999999999887765 4666667788899
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
+++.+++++++++++..|++++.+|+++++++|+++|+|.+|+||++++||+|+++++||+|+|+|++|+++++.+.+.+
T Consensus 247 s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 326 (398)
T PRK07504 247 SPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFR 326 (398)
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877788899
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
|+++|+++.+++|||+++|++++|+.++|..++++.++..|+++++||||+|+||++|||+||++||+++
T Consensus 327 ~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 327 FLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKV 396 (398)
T ss_pred HHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 23
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.5e-67 Score=553.97 Aligned_cols=380 Identities=36% Similarity=0.581 Sum_probs=347.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
.+|+++|.|... ..+++++||||+|+||.|++.+. +.++..+|.|+|++||++++||+++|+++|++++++++
T Consensus 3 ~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~----~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~ 75 (385)
T PRK08574 3 RGTDAVRGYRGS---DPYGSLQPPIYLTALFRQEGEAY----PSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFN 75 (385)
T ss_pred ccceeeecCCCC---CCCCCccCCccCCcceecCcchh----hcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 468899987443 23689999999999999876532 22334579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+..++.+++++||+|+++.+.|+++...+.. +...|+++++++. |+++++++++++++++|++|+|+||+|.+
T Consensus 76 sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-~~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v 153 (385)
T PRK08574 76 SGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-LEKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKV 153 (385)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-hhccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEe
Confidence 999999999999999999999999999998877754 3778999988765 68999999976469999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEE-eChHHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~~ 382 (532)
.|+++|+++|+++|+++|+|++++.++..+++..|+|++++|+||+++||+|++||+++ ++++++++++..+..+|..+
T Consensus 154 ~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~ 233 (385)
T PRK08574 154 IDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIM 233 (385)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999988878888899999999999999999999999555 46788888888777789999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcC--CcccEEEEEEcCCHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT--GFGGVVSFEVDGDLTAT 460 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~--g~G~~vsf~l~g~~~~~ 460 (532)
+|+.+|+++++++++..|++++.+|+++++++|+++|.|.+|+||++++||+|+++++||+ |+|+|++|+++++.+.+
T Consensus 234 ~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~ 313 (385)
T PRK08574 234 QPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAV 313 (385)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 69999999998777889
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
.+|+++|+++.+++|||+.+|++++|+.++|..+++++++..|+++++||||||+||++|||+||++||++|
T Consensus 314 ~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 385 (385)
T PRK08574 314 LKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGSI 385 (385)
T ss_pred HHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875
No 24
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-67 Score=555.46 Aligned_cols=370 Identities=35% Similarity=0.607 Sum_probs=340.6
Q ss_pred CCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc
Q 009523 159 IVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP 238 (532)
Q Consensus 159 ~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~ 238 (532)
+.+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||+++.||++||+++|++.+++++|||+|+..++.++++
T Consensus 5 ~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~ 84 (397)
T PRK05939 5 IEHGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLR 84 (397)
T ss_pred CCCCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcC
Confidence 34689999999999999999988887776655679999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCC
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 318 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi 318 (532)
+||+||++++.|+++..++. .++..|+++++++..|+++|++++++ +|++|++++|+||+|.+.|+++|+++|+++|+
T Consensus 85 ~Gd~Vv~~~~~y~~t~~~~~-~l~~~G~~v~~v~~~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi 162 (397)
T PRK05939 85 AGDHLVSSQFLFGNTNSLFG-TLRGLGVEVTMVDATDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGL 162 (397)
T ss_pred CCCEEEECCCccccHHHHHH-HHHhcCCEEEEECCCCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCC
Confidence 99999999999999877664 46778999999999999999999987 79999999999999999999999999999999
Q ss_pred EEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChH--------H-------------HHHHH-HHhh
Q 009523 319 IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------L-------------VTQIR-NLHH 376 (532)
Q Consensus 319 ~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--------l-------------i~~l~-~~~~ 376 (532)
++|+|++++.+..+++..+|+|++++|+||+++|||++++|+++.+.. + +..++ ....
T Consensus 163 ~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
T PRK05939 163 LYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLR 242 (397)
T ss_pred EEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHH
Confidence 999999999888788989999999999999999999999998875321 1 11222 2345
Q ss_pred hcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC
Q 009523 377 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 456 (532)
Q Consensus 377 ~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~ 456 (532)
.+|..++|+++|+++++++|+..|++++.+|+..+++||++||.|.+|+||++++||+|+++++++.|+|+|++|++++.
T Consensus 243 ~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~ 322 (397)
T PRK05939 243 DMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG 322 (397)
T ss_pred hcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 457 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 457 ~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+.+|+++++++.+++|||+++|++++|+.++|..++++.++..|+++++||||||+||++|||+||++||++
T Consensus 323 -~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~~ 396 (397)
T PRK05939 323 -IDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALDA 396 (397)
T ss_pred -HHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999975
No 25
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=4.2e-67 Score=555.64 Aligned_cols=385 Identities=37% Similarity=0.596 Sum_probs=359.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||+|+||.|++.+++++.+.+...+|.|+|+++|+++.||++||+++|++.+++++
T Consensus 10 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 10 FSTRAIHHGYDPL--DHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred ccchheeCCCCCC--CCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999996542 23689999999999999999999888886666689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+.+++.+++++||+||++.+.|+++..++...+...|+++++++.+|++++++++++ +|++|++|+|+||+|.+
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~le~p~NPtG~~ 166 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISD-KTRMVYFETPANPNMRL 166 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCc-cCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999998887776677889999999999999999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH--HhhhcCCC
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGA 381 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~--~~~~~G~~ 381 (532)
.|+++|.++|+++|+++|+|++|+.++...++..|+|++++|+||+++|++++++|+++++++++++++. .....|..
T Consensus 167 ~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 167 VDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAV 246 (403)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCC
Confidence 9999999999999999999999998877778888999999999999999999999999998898888874 35566888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
++++.+++++++++++..|++++.+|++.++++|++||.|.+|+||++++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 326 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGR 326 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987777889
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+|++.++++.+++|||+++|++++|.+++|..+++++++..|+++++||||||+||++|||+||++||++
T Consensus 327 ~~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~ 396 (403)
T PRK07503 327 RFMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDA 396 (403)
T ss_pred HHHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 26
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=4.9e-67 Score=550.87 Aligned_cols=376 Identities=37% Similarity=0.650 Sum_probs=348.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|..+|+|...+ ..+++++||||+|+||.|++.+ +..+|.|+|+++|+...||+++|+++|++.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~ 72 (380)
T PRK06176 3 MQTKLIHGGISED--TTTGAVSVPIYQTSTYRQDAIG--------RPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFA 72 (380)
T ss_pred ccceeeECCCCCC--CCCCCccCCcccCCceecCCCC--------CcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEEC
Confidence 5688999996542 2368999999999999998732 23579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
|||.|+.+++ .+++|||+|+++++.|+++...+...+...|++++++|..|++++++++++ +|++|++|+|+||+|.+
T Consensus 73 SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~ 150 (380)
T PRK06176 73 SGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKP-NTKALYLETPSNPLLKI 150 (380)
T ss_pred CHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCc-CceEEEEECCCCCCcee
Confidence 9999998666 578999999999999999988887778889999999999999999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 382 (532)
.|+++|.++|+++|+++|+|++++.++...+..+|+|++++|++|+++||+++++|+++.+ +++.++++..+...|..+
T Consensus 151 ~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~ 230 (380)
T PRK06176 151 TDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVL 230 (380)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998877788899999999999999999999999988875 567788888777788889
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
++..+|+++++++++..|++++++|+.+++++|+++|.|.+|+||+++++|+|+++++|++|+|+|++|++++ .+.+.+
T Consensus 231 ~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~ 309 (380)
T PRK06176 231 GPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-DSEAVA 309 (380)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 578899
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
|+++|+++.+++|||+++|++++|+.++|..++++.++..|+++++||||||+||++|||+||++||+++
T Consensus 310 f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 310 FVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred HHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 27
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=7e-67 Score=548.65 Aligned_cols=375 Identities=29% Similarity=0.510 Sum_probs=340.2
Q ss_pred ccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCH
Q 009523 146 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 225 (532)
Q Consensus 146 t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG 225 (532)
|+++|.|...+ ..+++++||||+|+||.|++.++.. ....+|.|+|.+||++..||++||+++|++++++++||
T Consensus 1 t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~----~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG 74 (377)
T TIGR01324 1 TRLIHSGRQPR--FSQGSVNPPLQRASTVLFDSHAAQR----RAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSG 74 (377)
T ss_pred CeeEECCCCCC--CCCCCccCCeeCCCceeeCChhhhc----CCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcH
Confidence 56789885442 2368999999999999999865431 23457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC
Q 009523 226 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 305 (532)
Q Consensus 226 ~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d 305 (532)
++|+..++.+++++||+||++++.|+++..++...++.+|+++.+++..+.+++++++++ +||+|++|+|+||+|.+.|
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~-~tklV~lesp~Np~g~~~d 153 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQP-NTKVLFLEAPSSITFEIQD 153 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCcHHH
Confidence 999999999999999999999999999887766567788999999987766899999987 7999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHH
Q 009523 306 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 385 (532)
Q Consensus 306 l~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~ 385 (532)
+++|+++|+++|+++|+|++|+.+..++++++|+|++++|++|+++||+|+++|+++++++.+++++.....+|..++|.
T Consensus 154 l~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 154 IPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999988899999999999999999999999999999999988888887777889999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHH
Q 009523 386 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFI 464 (532)
Q Consensus 386 ~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~~~~~~~~l 464 (532)
.+|+++++++++..||+++++|+.+++++|++||.|.+|+||++++||+|+++++|++|+|+|++|++++ +.+.+.+|+
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~ 313 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFL 313 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 567889999
Q ss_pred HHcCCCceeecCCCcccccccCc-cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 465 DALKIPYIAPSFGGCESIVDQPA-IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 465 ~~L~~~~i~vs~G~~~sl~~~pa-~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
++|+++++++|||+++|++++|. .++|.. +...|+.+++||||||+||++|||+||++||++|
T Consensus 314 ~~l~~~~~~~slG~~~sl~~~~~~~~~~~~-----~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 314 DHLQLFGLGYSWGGYESLALCNQPELGHRP-----NIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred HhCCcceEeccCCCccceeecCCCCCCHHH-----HHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999997322 555543 4467888899999999999999999999999875
No 28
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=9.3e-67 Score=552.60 Aligned_cols=378 Identities=36% Similarity=0.591 Sum_probs=350.1
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|.|...+ ..+++++||||++++|.|++.. ...+|.|+|+++|+.+.|+++||+++|+++++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~ 81 (405)
T PRK08776 12 SAATAAVRAGIDRD--TAYGAVTPPIVLSSNFSFDGFG--------NKRQYDYTRSGNPTRDLLGEALAELEGGAGGVIT 81 (405)
T ss_pred CccchheeCCCCCC--CCCCCccCCEeccceEEeCCCC--------cccCCcccCCCChHHHHHHHHHHHHhCCCceEEE
Confidence 36789999996542 3468999999999999988742 1236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+.+++.+++++||+|+++.+.|+++..++...++..|+++..++..|+++|++++++ +|++|++|+|+||+|.
T Consensus 82 ~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~ 160 (405)
T PRK08776 82 ATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLR 160 (405)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999888777777788999999998899999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 381 (532)
+.|+++|+++|+++|+++|+|++|+.+..+.++.+|+|++++|+||+++|++++++|+++. ++++.++++......|..
T Consensus 161 v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~ 240 (405)
T PRK08776 161 ITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLT 240 (405)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999887778888999999999999999999999998877 467878887777777888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
++++.+|+++++++++..|++++.+|+..++++|+++|.|.+|+||++++||+|++++++++|+|+|++|+++++.+.+.
T Consensus 241 ~s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~ 320 (405)
T PRK08776 241 GSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVR 320 (405)
T ss_pred CCHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987777889
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+|+++|+++.+++|||+.+|++++|+.++|..++++.+...|+++++||||||+||++|||+||++||++
T Consensus 321 ~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 321 AFVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred HHHHhCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 29
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=1.4e-66 Score=548.16 Aligned_cols=380 Identities=38% Similarity=0.634 Sum_probs=355.1
Q ss_pred cccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 009523 145 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 224 (532)
Q Consensus 145 ~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sS 224 (532)
.|.++|.|... ..++++++|||++++|.|++.+++.+.+.+...+|.|+||++|+..+||++|++++|++.+++++|
T Consensus 1 ~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s 77 (380)
T TIGR01325 1 ATLAIRGGKER---TEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATAT 77 (380)
T ss_pred CceeEECCCCC---CCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 36789998633 236889999999999999998777666655556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc
Q 009523 225 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 304 (532)
Q Consensus 225 G~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~ 304 (532)
|++|+.+++.+++++||+|+++.+.|++++..+...++.+|+++.+++..|++++++++++ ++++|++|+|+||+|.+.
T Consensus 78 G~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~le~p~np~g~~~ 156 (380)
T TIGR01325 78 GMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKP-NTKLVFVETPSNPLGELV 156 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCeee
Confidence 9999999999999999999999999999888777778889999999999999999999987 699999999999999999
Q ss_pred CHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccH
Q 009523 305 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP 384 (532)
Q Consensus 305 dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~ 384 (532)
|+++|.++|+++|+++|+|++|+.++...+++.|+|++++|+||+++|+++++||++++++++++.++......|..+++
T Consensus 157 dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p 236 (380)
T TIGR01325 157 DIAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSP 236 (380)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCH
Confidence 99999999999999999999998887778888999999999999999999999999999999999888877778999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHH
Q 009523 385 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 464 (532)
Q Consensus 385 ~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l 464 (532)
+.+++++++++++..|++++.+++++++++|+++|.|.+|+||+++++|+|+++++|+.|+|+|++|+++ +.+.+.+|+
T Consensus 237 ~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~ 315 (380)
T TIGR01325 237 FNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVL 315 (380)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 668889999
Q ss_pred HHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 465 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 465 ~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
++|+++.+++|||+++|++.+|++++|..+++++++..|+.+++||||||+||++|||+||++||
T Consensus 316 ~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 316 DAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred HcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 30
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.6e-66 Score=552.95 Aligned_cols=386 Identities=31% Similarity=0.493 Sum_probs=352.2
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|.|...+ ..+++++||||+++||.|++.+++.+.++.+..++.|+|.++|+...||++||+++|++.++++
T Consensus 7 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 7 GFATLAVHAGAQPD--PTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CcchhheECCcCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 36799999995442 2358999999999999999988777766544456899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+|||+|+.+++.+++++||+||++.+.|+++...+...+...|++++++|..|++++++++++ +|++|++|+|+||+|.
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~vesp~NptG~ 163 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITP-RTKAIFIESIANPGGT 163 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCe
Confidence 999999999999999999999999999999888777777888999999999999999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh--H--------------
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--K-------------- 366 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~-------------- 366 (532)
+.|+++|.++|+++|+++|+|+++++++.++++++|+|++++|+||+++||++++||+++... .
T Consensus 164 v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~ 243 (427)
T PRK05994 164 VTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR 243 (427)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCc
Confidence 999999999999999999999999998888999999999999999999999999999888522 1
Q ss_pred -------HHHH----------HHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009523 367 -------LVTQ----------IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 429 (532)
Q Consensus 367 -------li~~----------l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl 429 (532)
+.+. ........|..++|+.+|+++++++++..|++++.+|+++++++|++||+|.+|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l 323 (427)
T PRK05994 244 PEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL 323 (427)
T ss_pred chhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 1111 11134567899999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009523 430 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 508 (532)
Q Consensus 430 ~s~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~ 508 (532)
++||+|+++++|+ +|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|+.++|..+++++++..|+++++
T Consensus 324 ~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~l 403 (427)
T PRK05994 324 PDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDV 403 (427)
T ss_pred CCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCc
Confidence 9999999999997 789999999998777889999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009523 509 VRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 509 IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
||||||+||++|||+||++||++
T Consensus 404 iRlsvGlE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 404 VRLSIGIEDVDDIIADLEQALAK 426 (427)
T ss_pred EEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999999999999985
No 31
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=4.3e-66 Score=547.63 Aligned_cols=386 Identities=36% Similarity=0.616 Sum_probs=357.9
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
+.|.++|.|...+ ..++++++|||++++|.|++.+++.+.+..+..+|.|+||++|+..+||++||+++|.+++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~ 86 (400)
T PRK06234 9 FATKAIHGGHIGD--KQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAA 86 (400)
T ss_pred ccchheECCCCCC--CCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 5799999996542 23689999999999999999887776665545678999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+..++.+++++||+|+++.+.|+.+...+...++..|+++++++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 87 sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~-~tklI~iesP~NPtG~v 165 (400)
T PRK06234 87 SGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKA-NTKVVYLETPANPTLKV 165 (400)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhcc-CCeEEEEECCCCCCCCc
Confidence 99999999999999999999999999999888777777889999999999999999999987 69999999999999999
Q ss_pred cCHHHHHHHHHhC--CCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH--hhhcC
Q 009523 304 VDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLG 379 (532)
Q Consensus 304 ~dl~~I~~la~~~--gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G 379 (532)
.|+++|.++|+++ |+++|+|++|+.++...++..|+|++++|+||+++|++++++|+++++++++++++.. ....|
T Consensus 166 ~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g 245 (400)
T PRK06234 166 TDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTG 245 (400)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcC
Confidence 9999999999997 9999999999988777788889999999999999999999999999999988888753 34578
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH
Q 009523 380 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 459 (532)
Q Consensus 380 ~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~ 459 (532)
..++++.+|+++++++++..|++++.+|+++++++|+++|.|.+|+||++++||+|++++++++++|+|++|+++++.+.
T Consensus 246 ~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~ 325 (400)
T PRK06234 246 SVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEE 325 (400)
T ss_pred CCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999876677
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+.+|+++|+++++++|||+++|++++|++++|..+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 326 ~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 326 GKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999863
No 32
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.4e-66 Score=542.67 Aligned_cols=374 Identities=38% Similarity=0.659 Sum_probs=346.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|+|...+ ..+++++||||+|+||.|++.. ...+|.|+|+++|+...||++||+++|++.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~ 72 (377)
T PRK07671 3 AKTKLIHGGIIGD--PSTGAVSVPIYQVSTYKQEAVG--------KHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFG 72 (377)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeC
Confidence 5799999996542 2368999999999999988742 23479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
|||+|+..++ .++++||+|+++++.|++++..+...+..+|+++++++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 73 sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~-~tklV~le~P~NPtg~~ 150 (377)
T PRK07671 73 SGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRP-NTKAIYVETPTNPLLKI 150 (377)
T ss_pred CHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcc
Confidence 9999887765 578999999999999998887776677888999999998899999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~ 382 (532)
.|+++|.++|+++|+++|+|++|+.++...+..+|+|++++|+||+++||+++++|+++. +++++++++..+...|+.+
T Consensus 151 ~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~ 230 (377)
T PRK07671 151 TDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL 230 (377)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999998877778888999999999999999999989998776 4578888888888889999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
+++.+|+++++++++..|++++++|++.++++|+++|+|.+|+||++++||+|+++++|+.|+|+|++|++ ++.+.+.+
T Consensus 231 ~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~ 309 (377)
T PRK07671 231 GPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANK 309 (377)
T ss_pred CHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56788999
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
|+++|+++.+++|||+++|++++|+.++|..++++.++.+|+++++||||||+||++|||+||++||+
T Consensus 310 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 310 VLERLQYFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred HHHhCCcceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 33
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=6.1e-66 Score=544.38 Aligned_cols=381 Identities=35% Similarity=0.567 Sum_probs=352.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+.++||+++|+++|+++++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 5 HMETALIHHGYTSE--EHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 36799999996542 2368999999999999999998888877666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+..++.+++++||+|+++++.|+++...+....+..|+++.+++..|++++++++++ +|++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~-~tklV~lesp~NptG~ 161 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRP-NTKLIFVETPINPTMK 161 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCc-CceEEEEeCCCCCCce
Confidence 999999999999999999999999999999988877667778999999988899999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHH-HHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~-~~~~~~G~~ 381 (532)
+.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|+||+++|++++++|++++++++++++. ..+...|+.
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998887778888899999999999999999999999999998887754 455667888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
++++.+|+++++++++..|++++.+++++++++|+++|+|..|.|| +|+++++|++++|+|++|+++++.+.+.
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~ 315 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQ 315 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHH
Confidence 8999999999999999999999999999999999999999999998 6889999999999999999987667889
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+|+++|+++++++|||+++|++++|+.++|..+++++++..|+++++||||||+||++|||+||++||++|
T Consensus 316 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 316 AFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred HHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 34
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=7.4e-66 Score=550.80 Aligned_cols=374 Identities=33% Similarity=0.592 Sum_probs=343.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ .+++++||||+|+||.|++.. ....|.|+|++||++++|++++|+++|.+.+++++
T Consensus 87 ~~t~~~~~~~~~~---~~~~~~~Pi~~sst~~~~~~~--------~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~ 155 (464)
T PLN02509 87 VSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFT 155 (464)
T ss_pred cchHheeCCCCCC---CCCCccCCccccceecCcccc--------ccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence 7899999995542 267999999999999887632 22469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+.+++ .++++||+||++++.|+++..++...+...|+++.+++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 156 SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~-~TklV~lesPsNPtG~i 233 (464)
T PLN02509 156 SGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGP-QTKLVWLESPTNPRQQI 233 (464)
T ss_pred cHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCc-CCeEEEEECCCCCCCCH
Confidence 9999986655 578999999999999999887776677788999999998899999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~ 382 (532)
.|+++|+++|+++|+++|+|++++.++...++.+|+|++++|++|+++||+++++|+++.++ .+.+.++..+...|..+
T Consensus 234 ~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l 313 (464)
T PLN02509 234 SDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL 313 (464)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999988878888899999999999999999999999998754 45566666666667889
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
+|+.+|+++++++++..|++++.+++++++++|++||.|++|+||+|++||+|+++++|++|+|+|++|++ ++.+.+.+
T Consensus 314 ~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~~ 392 (464)
T PLN02509 314 APFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSKH 392 (464)
T ss_pred CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56788899
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|+++|+++.+++|||+++|++++|+.++|..++++++++.||++++||||||+||++|||+||++||+.
T Consensus 393 f~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 393 LVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRT 461 (464)
T ss_pred HHHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999974
No 35
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-65 Score=538.56 Aligned_cols=374 Identities=41% Similarity=0.684 Sum_probs=346.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|.++|.|.+ ..+++++||||+|+||.|++. .+|.|+|.++|+.++||+++|+++|++.++++
T Consensus 2 ~~~t~~~~~~~~----~~~~~~~~pi~~~~~~~~~~~-----------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~ 66 (376)
T PRK06460 2 KDATRTVREDID----EATGAITTPIYQTTAYHYPEG-----------EKYRYSREANPTVLELTKKIVELENAEMGVAF 66 (376)
T ss_pred CcceeeeecCCC----CCCCCccCCccCCcceeeCCC-----------CCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 378999999852 236899999999999998863 26999999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+..++.+++++||+|+++.+.|++++..+...++..|+++..++.++.+.+++.+++ ++++|++|+|+||+|.
T Consensus 67 ~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG~ 145 (376)
T PRK06460 67 SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLLR 145 (376)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCc
Confidence 999999999999999999999999999998888887778888999999987776667766665 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCc
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~ 382 (532)
+.|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++|++|.++|+++++++++++++..+..+|..+
T Consensus 146 v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~ 225 (376)
T PRK06460 146 VVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSL 225 (376)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999988766667777899999999999999998999999999999999988888888889
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
++..+|+++++++++..|++++.+|+++++++|+++|.|.+|+||+|++||+|+++++|++|+|+|++|+++++.+.+.+
T Consensus 226 ~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~ 305 (376)
T PRK06460 226 DPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALK 305 (376)
T ss_pred CHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877788999
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
|+++|+++.+++||||++|++.+|++++|+.++++.+.+.|+++++||||||+||++|||+||++||+++
T Consensus 306 ~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 306 VMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred HHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 36
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=1.3e-65 Score=547.04 Aligned_cols=384 Identities=39% Similarity=0.632 Sum_probs=348.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|+|...+ ..+++++||||+++||.|++.+++.+.++....+|.|+|+++|+.++||++||+++|.+.+++++
T Consensus 2 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~ 79 (418)
T TIGR01326 2 FETLQLHAGQEPD--PTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVA 79 (418)
T ss_pred ccceeEECCCCCC--CCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEc
Confidence 5688999986542 23689999999999999999987766655444568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
|||+|+..++.+++++||+||++.+.|++++..+...++..|+++++++..|++++++++++ ++++|++|+|+||+|.+
T Consensus 80 sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~-~t~~V~le~p~NPtg~v 158 (418)
T TIGR01326 80 SGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDE-NTKAVFAETIGNPAINV 158 (418)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCee
Confidence 99999999999999999999999999999888777778889999999998899999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHH---------------
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV--------------- 368 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li--------------- 368 (532)
.|+++|.++|+++|+++|+|++++.++...++..|+|++++|+||+++|+|+++||+++.++++.
T Consensus 159 ~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 159 PDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCc
Confidence 99999999999999999999999888777888889999999999999999999998888543211
Q ss_pred ----------------HHHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Q 009523 369 ----------------TQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 431 (532)
Q Consensus 369 ----------------~~l~-~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s 431 (532)
.+.+ ......|..++|..+|+++++++++..|++++.+|+..++++|.++|+|..|+||++++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 1111 23445688889999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009523 432 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 510 (532)
Q Consensus 432 ~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IR 510 (532)
||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|..++|..+++++++..|+++++||
T Consensus 319 ~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR 398 (418)
T TIGR01326 319 HPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIR 398 (418)
T ss_pred CccHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 78999999999877777899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHh
Q 009523 511 FSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 511 lSvG~ed~~dli~dL~~AL~ 530 (532)
||||+||++|||+||++||+
T Consensus 399 ~svGlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 399 LSVGIENIDDIIADLEQALE 418 (418)
T ss_pred EEecCCCHHHHHHHHHHhhC
Confidence 99999999999999999985
No 37
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.7e-65 Score=537.66 Aligned_cols=377 Identities=38% Similarity=0.646 Sum_probs=342.4
Q ss_pred CCccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE
Q 009523 142 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 221 (532)
Q Consensus 142 ~~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~ 221 (532)
++++|.++|.|...+ ..+++++||||++++|.|++.+++.........+|.|+|++||++++||+++++++|++.+++
T Consensus 7 ~~~~t~~~~~~~~~~--~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~ 84 (384)
T PRK06434 7 NGFNTRAVQSGELRD--PRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALS 84 (384)
T ss_pred CCcccceeECCCCCC--CCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEE
Confidence 347899999986542 347899999999999999998766533222235799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC
Q 009523 222 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 301 (532)
Q Consensus 222 ~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG 301 (532)
++|||+|+.+++.+++++||+||++...|++++.++...+..+|++++++|.++.+.++ +++.++++|++|+|+||++
T Consensus 85 ~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~ 162 (384)
T PRK06434 85 FSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTL 162 (384)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCc
Confidence 99999999999999999999999999999999988877788899999999987666665 4444699999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCC
Q 009523 302 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG 380 (532)
Q Consensus 302 ~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~ 380 (532)
.+.|+++|+++|++++ ++||+++++++..+|+..|+|++++|.+|+++||++++||+++.+ +++.++++..+..+|.
T Consensus 163 ~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~ 240 (384)
T PRK06434 163 KVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGS 240 (384)
T ss_pred eeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCC
Confidence 9999999999999998 567999999988999999999999999999999999999998774 5677778777667899
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009523 381 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 460 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~ 460 (532)
.++++.+|+++++++++..|++++.+|++.++++|++||.|.+|+||+++ ++++|++|+|+|++|++++ .+.+
T Consensus 241 ~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~-~~~~ 313 (384)
T PRK06434 241 NPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRS-MEDV 313 (384)
T ss_pred CCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECC-HHHH
Confidence 99999999999999999999999999999999999999999999999984 7899999999999999985 6788
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.+|+++|+++.+++|||+++|++++|+.++|..+++++++..|+++++||||||+||++|||+||+|||++
T Consensus 314 ~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 314 HKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred HHHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999974
No 38
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=4.8e-65 Score=534.76 Aligned_cols=368 Identities=48% Similarity=0.808 Sum_probs=349.0
Q ss_pred CcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCC
Q 009523 162 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG 241 (532)
Q Consensus 162 ~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd 241 (532)
++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.++||+++|+++|++++++++||++|+..++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 36899999999999999998888776666789999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEE
Q 009523 242 HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 242 ~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lI 321 (532)
+|+++.+.|+++...+...++..|+++.+++.+|++++++++++ ++++|++|+|+||+|.+.|+++|+++|+++|+++|
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~li 159 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLV 159 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 99999999999988777677788999999999999999999987 79999999999999999999999999999999999
Q ss_pred EECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHH
Q 009523 322 IDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR 400 (532)
Q Consensus 322 vDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r 400 (532)
+|++++.++...++.+|+|++++|+||+++||+++++|++++++ +++++++.....+|..+++..+++++++++++..|
T Consensus 160 vD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r 239 (369)
T cd00614 160 VDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLR 239 (369)
T ss_pred EECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHH
Confidence 99999988777888999999999999999999999999999987 88899988877789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009523 401 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 480 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~ 480 (532)
++++.+|+++++++|+++|.|.+|+||+++++|+|+++++++.|.|+|++|+++++.+.+.+|+++|+++.+++|||+++
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~ 319 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVE 319 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999866788999999999999999999999
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
|++++|+.++|..++++.++..|+++++||||||+||++|||+||++||+
T Consensus 320 sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 320 SLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999984
No 39
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=6e-65 Score=535.09 Aligned_cols=374 Identities=34% Similarity=0.598 Sum_probs=344.7
Q ss_pred cccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 009523 145 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 224 (532)
Q Consensus 145 ~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sS 224 (532)
+|.++|.|..+ . .+++++||||+|+||.|++.+ ...+|.|+|+++|+.++||+++++++|++++++++|
T Consensus 2 ~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~s 70 (378)
T TIGR01329 2 STLLVNTDNKN--D-PYDASSMPIYQTATFKQPLAI--------ENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSS 70 (378)
T ss_pred CceeEeCCCCC--C-CCCCcCCCeecCcceecCCcc--------ccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECC
Confidence 57889998543 2 268999999999999987643 124699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc
Q 009523 225 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 304 (532)
Q Consensus 225 G~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~ 304 (532)
|++|+.+++. ++++||+|+++++.|+++..++...++.+|+++++++..|++++++++++ +||+|++|+|+||+|.+.
T Consensus 71 G~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v~ 148 (378)
T TIGR01329 71 GMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKIV 148 (378)
T ss_pred HHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCeee
Confidence 9999988775 78999999999999999887777677888999999999999999999987 799999999999999999
Q ss_pred CHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCcc
Q 009523 305 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALN 383 (532)
Q Consensus 305 dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~~ 383 (532)
|+++|+++|+++|+++|+|++++.++...++.+|+|++++|++|+++||+++++|+++.+ +++.++++..+...|..++
T Consensus 149 dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~ 228 (378)
T TIGR01329 149 DIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLA 228 (378)
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCC
Confidence 999999999999999999999988888888899999999999999999999899999875 4566778877776788899
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHH
Q 009523 384 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 463 (532)
Q Consensus 384 ~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~ 463 (532)
++.+|+++++++++..|++++.+|+..++++|++||.+.+|.||+++++|+|+++++++.|+|+|++|++ ++.+.+.+|
T Consensus 229 ~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~ 307 (378)
T TIGR01329 229 PFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRL 307 (378)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 566668999
Q ss_pred HHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 464 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 464 l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
++.|+++++++|+|+++|++++|+.++|..++++++++.|+++++||||||+||++|||+||++||+++
T Consensus 308 ~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 308 VEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTA 376 (378)
T ss_pred HHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999863
No 40
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=7.7e-65 Score=536.01 Aligned_cols=375 Identities=39% Similarity=0.636 Sum_probs=344.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||+|+||.|++.++ ...+|.|+|+++|+...||++||+++|.+.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~-------~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~ 83 (388)
T PRK07811 13 FATRAIHAGYEPD--PATGAVNPPIYASSTFAQDGVGG-------LRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFS 83 (388)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCccc-------ccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeC
Confidence 6799999986542 33689999999999999887532 12468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+.+++.+++++||+|+++.+.|++++..+...++.+|+++.+++..|+++|++++++ +||+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~ 162 (388)
T PRK07811 84 SGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITP-RTKLIWVETPTNPLLSI 162 (388)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCc-CCeEEEEECCCCCccee
Confidence 99999999999999999999999999999887776677788999999999999999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 382 (532)
.|+++|+++|+++|+++|+|++|+.+....++..|+|++++|++|+++|++++++|+++.+ +++.++++..+...|...
T Consensus 163 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~ 242 (388)
T PRK07811 163 TDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP 242 (388)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877778888999999999999999999899988875 567777777766678888
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
++..+|+++++++++..|++++.+|++.++++|+++|+|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+.+
T Consensus 243 s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 322 (388)
T PRK07811 243 GPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARD 322 (388)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|+++|+++.+++|||+++|++++|..++|..++++ ..|+++++||||||+||++|||+||++||++
T Consensus 323 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 323 FCARTKVFTLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALGQ 388 (388)
T ss_pred HHHhCCcceeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999998864 4699999999999999999999999999974
No 41
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2e-64 Score=533.43 Aligned_cols=380 Identities=26% Similarity=0.431 Sum_probs=347.2
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++...+.++..+|.|+||+||++++||+++|+++|++.++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 86 (394)
T PRK07050 9 ALQTRIVQPDDQIP--PGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQ 86 (394)
T ss_pred CccchheECCCCCC--CCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 57899999996542 2368999999999999999998877666555568999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+.+++.+++++||+||++++.|+++..++...+...|+++++++..+.+++++++++ +||+|++|+|+||+|.
T Consensus 87 ~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~-~tklV~le~p~Np~~~ 165 (394)
T PRK07050 87 PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQP-NTRLIWLEAPGSVTME 165 (394)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCcc
Confidence 999999999999999999999999999999887776667888999999988788899999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 381 (532)
+.|+++|+++|+++|+++|+|++|+.+..++++.+|+|++++|++|+++||+++++|+++. +++++++++..+...|..
T Consensus 166 ~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 166 VPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred HhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998889999999999999999999999998997776 568888898888888999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTA 459 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g--~~~~ 459 (532)
++++++|+++++++++..|++++.+|+.+++++|+++|.|.+|+||+++++|+|.++++++.++|++++|++++ +.+.
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~ 325 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQ 325 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 3578
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+|++.|+++++++|||+++|+++ |..++|.... ..++.+++||||||+||++|||+||++||++
T Consensus 326 ~~~~~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svGlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 326 VDAFVEALELFAIGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIGLEDEADLIADLEQALEA 391 (394)
T ss_pred HHHHHHcCCCCeeccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 8776665542 2336679999999999999999999999985
No 42
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3e-63 Score=524.26 Aligned_cols=376 Identities=37% Similarity=0.610 Sum_probs=348.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|.|...+ ..+++++||||++++|.|++.++ ..+|.|+|.++|+.+.||+++|+++|++.+++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~ 76 (390)
T PRK08064 7 IDTLLLHNQYKHD--KQTGAVNVPIYHASTFHQFDFDT--------FGKYDYSRSGNPTREALEDIIAELEGGTKGFAFA 76 (390)
T ss_pred cccceeeCCCCCC--CCCCCccCCcccCcceecCcccc--------cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEEC
Confidence 6799999996542 23689999999999999887543 2468999999999999999999999998999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
|||.|+.+++. ++++||+||++++.|++++..+...++..|+++.+++..|++++++++++ +|++|++|+|+||||.+
T Consensus 77 sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~-~tklV~l~~p~NptG~~ 154 (390)
T PRK08064 77 SGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKP-NTKLFYVETPSNPLLKV 154 (390)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCcEe
Confidence 99999988886 78999999999999999888777777889999999999899999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 382 (532)
.|+++|.++|+++|+++|+|++|+.+....+.++|+|++++|+||+++|++++++|+++.+ ++++++++..+..+|...
T Consensus 155 ~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~ 234 (390)
T PRK08064 155 TDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL 234 (390)
T ss_pred ccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877777888999999999999999999899988775 578899988888889999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
++..+|+++++++++..|++++.+|+.+++++|+++|.|.+|+||+++++|+|++++++++|+|+|++|++++ .+++.+
T Consensus 235 ~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~ 313 (390)
T PRK08064 235 GVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EEAVRQ 313 (390)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974 678899
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
|+++++++.+++|+|+.+|++++|+.++|..++.+.+...|+++++||||+|+||++|+|+||++||+++
T Consensus 314 f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 314 FVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred HHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999853
No 43
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=5.7e-63 Score=525.42 Aligned_cols=382 Identities=30% Similarity=0.506 Sum_probs=345.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhccc----CCCCCCCCCchhHHHHHHHHHhhhCCCc
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR----ASFEYGRYGNPTTVVVEEKMSALEGAES 218 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~----~~~~Y~R~~~p~~~~Le~~lA~l~ga~~ 218 (532)
...++++|+|...++ +++++||||+|+||.|++.+++++.+.+.. .+|.|+|++||++++||+++|+++|++.
T Consensus 17 ~~~~~~~~~~~~~~~---~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~ 93 (418)
T PLN02242 17 DPAAALASARHEFGE---HGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEA 93 (418)
T ss_pred ChHHHHhcCCCCCCC---CCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCe
Confidence 366889999977532 467899999999999999998887775542 3589999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhc-ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC
Q 009523 219 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL-PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 297 (532)
Q Consensus 219 ~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l-~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~ 297 (532)
+++++||++|+..++.+++++||+|+++.+.|+++...+...+ +..|+++++++..|+++++++++++++++|++++|+
T Consensus 94 ~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~ 173 (418)
T PLN02242 94 AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESIS 173 (418)
T ss_pred EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCC
Confidence 9999999999999999999999999999999998876665444 347999999998899999999986349999999999
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--
Q 009523 298 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-- 375 (532)
Q Consensus 298 NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-- 375 (532)
||||.+.|+++|+++|+++|+++|+|++|. ++.+++..+|+|++++|+||+++|++++++|++++++++++.++..+
T Consensus 174 NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~ 252 (418)
T PLN02242 174 NPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHG 252 (418)
T ss_pred CCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhh
Confidence 999999999999999999999999999996 45567778899999999999999999999999999999988887653
Q ss_pred --hhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhc---CCcccEEE
Q 009523 376 --HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM---TGFGGVVS 450 (532)
Q Consensus 376 --~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~---~g~G~~vs 450 (532)
...|..+++..+++++++++++..|++++.+|+.+++++|++++ + +|.||++++||+|+++++++ .|+|+|++
T Consensus 253 ~~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~s 330 (418)
T PLN02242 253 ALMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG-L-KVIYPGLEDHPQHALLKSMANKGYGFGGLLC 330 (418)
T ss_pred hhhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-C-EEECCCCCCCccHHHHHHhcccCCCceeEEE
Confidence 34677889999999999999999999999999999999999996 3 89999999999999999999 58999999
Q ss_pred EEEcCCHHHHHHHHHHcCCC----ceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHH
Q 009523 451 FEVDGDLTATIKFIDALKIP----YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADV 525 (532)
Q Consensus 451 f~l~g~~~~~~~~l~~L~~~----~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed-~~dli~dL 525 (532)
|+++ +.+.+.+|+++++++ .+++|||+++|++++|+.++|..++.++++..|+++++||||+|+|+ ++|||+||
T Consensus 331 f~l~-~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl 409 (418)
T PLN02242 331 LDMD-TEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQF 409 (418)
T ss_pred EEEC-CHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHH
Confidence 9997 467899999999977 88999999999999999999999999999999999999999999995 99999999
Q ss_pred HHHHhh
Q 009523 526 LQALHA 531 (532)
Q Consensus 526 ~~AL~~ 531 (532)
++||++
T Consensus 410 ~~al~~ 415 (418)
T PLN02242 410 EKALSA 415 (418)
T ss_pred HHHHHH
Confidence 999985
No 44
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=7.9e-62 Score=508.41 Aligned_cols=356 Identities=35% Similarity=0.569 Sum_probs=323.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|.++|.|...+ ..+++++||||+|+||.|++.. ...+|.|+|++||+..+||++||+++|++.+++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~ 76 (364)
T PRK07269 7 INTILAQAGIKSD--EATGALVTPLHFSTTYQHPEFG--------QSTGFDYTRTKNPTRAKLEETLAAIESADYALATS 76 (364)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEeC
Confidence 6799999996542 2368999999999999988731 23579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+.+++ .++++||+||++.+.|+++..++....+..++++.+. .|++++++++++ +||+|++|+|+||+|.+
T Consensus 77 sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~-~TklV~lesP~NPtg~~ 152 (364)
T PRK07269 77 SGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEE-DTDIVYIETPTNPLMVE 152 (364)
T ss_pred CHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCc-CceEEEEECCCCCCCee
Confidence 9999999988 4679999999999999998877665555556665543 489999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 382 (532)
.|+++|+++|+++|+++|+|++|+.++.++++..|+|++++|+||+++||+|+++|+++++ ++++++++..+...|..+
T Consensus 153 ~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~ 232 (364)
T PRK07269 153 FDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVL 232 (364)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998888889999999999999999999999999998874 678888887777778899
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
+++.+|+++++++++..|++++.+|+++++++|++||.|.+|.||+ .|++++|++. +.+.+.+
T Consensus 233 s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~-~~~~~~~ 295 (364)
T PRK07269 233 SPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVA-DETRIPH 295 (364)
T ss_pred CHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEEC-CHHHHHH
Confidence 9999999999999999999999999999999999999999999997 4889999997 4677899
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
|++.++++.+++|||+.+|++++|+.++|..++++.|..+|+++++||||||+||++|||+||+|||+
T Consensus 296 f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 296 ILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred HHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999996
No 45
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-60 Score=503.40 Aligned_cols=374 Identities=35% Similarity=0.553 Sum_probs=342.1
Q ss_pred ccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCH
Q 009523 146 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 225 (532)
Q Consensus 146 t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG 225 (532)
..+||++... ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|++++||+++|+++|++.+++++||
T Consensus 11 ~~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG 87 (389)
T PRK05968 11 AALITAHDEG---NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASG 87 (389)
T ss_pred hheeecCCCc---cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCH
Confidence 3467887654 3479999999999999999999888877666667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC
Q 009523 226 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 305 (532)
Q Consensus 226 ~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d 305 (532)
|+|+.+++.+++++||+|+++.+.|++++..+...++..|+++++++..|++++++++ + +|++|++|+|+|+++.+.|
T Consensus 88 ~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~d 165 (389)
T PRK05968 88 MAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-P-GAKLLYLESPTSWVFELQD 165 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999999888877788889999999999999999998 4 5899999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcCCCccH
Q 009523 306 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNP 384 (532)
Q Consensus 306 l~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~~~~~ 384 (532)
+++|+++|+++|+++|+|++++.+...+++.+|+|++++|+||+++||+++++|+++++++++++++.... ..|+.+++
T Consensus 166 l~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~ 245 (389)
T PRK05968 166 VAALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSP 245 (389)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCCh
Confidence 99999999999999999999988877778889999999999999999999889999999998888876443 46778999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHH
Q 009523 385 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 464 (532)
Q Consensus 385 ~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l 464 (532)
+.+++++++++++..|++++.+++++++++|+++|.|..|.||++++||. +++.|+|+|++|+++++ ....+|+
T Consensus 246 ~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~-----~~~~g~g~~~sf~~~~~-~~~~~f~ 319 (389)
T PRK05968 246 FEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP-----AGLSGTSGLFSFIFREG-IDVRAFA 319 (389)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH-----HhCCCCceEEEEEECCH-HHHHHHH
Confidence 99999999999999999999999999999999999999999999999983 45678999999999853 5778999
Q ss_pred HHcCCCceeecCCCcccccccCccccccC-CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 465 DALKIPYIAPSFGGCESIVDQPAIMSYWD-LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 465 ~~L~~~~i~vs~G~~~sl~~~pa~~s~~~-~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
++|+.+++++|+|+.+|+++ |+.++|.. .+.+.++..|+++++||||||+||++|||+||++||++
T Consensus 320 ~~L~~~~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 320 DALKLFRLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred HhCCccEEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 99999999999999999998 99999888 55888889999999999999999999999999999985
No 46
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=3.5e-60 Score=497.05 Aligned_cols=363 Identities=35% Similarity=0.564 Sum_probs=322.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
++.|+++|.|...+ ..+++++||||+|+||.|++.+ +..+|.|+||++|+..+|+++||+++ .++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~ 71 (366)
T PRK07582 3 GDGTRSVHAGGPEA--VPGEPVLPGPVFAAPYHLSPGE--------PTGPDTYGRASNPTWRALEAALGELE-GAEALVF 71 (366)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccccceEEccCcc--------ccCCceeECCCCccHHHHHHHHHHHc-CCCEEEE
Confidence 47799999985432 2368999999999999998531 23468899999999999999999999 7889999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+..++.+++++||+||++.+.|+++..++...++.+|+++++++..+... .+.+ ++++|++|+|+||+|.
T Consensus 72 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~-~t~lV~le~p~NPtg~ 147 (366)
T PRK07582 72 PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALA-GADLVLAETPSNPGLD 147 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---Hhcc-CceEEEEECCCCCCCC
Confidence 99999999999999999999999999999987776666778899999998765432 2334 6999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 381 (532)
+.|+++|+++|+++|+++|+|++|+.+....++++|+|++++|+||+++|++++++|++++ +++++++++.++...|..
T Consensus 148 v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~ 227 (366)
T PRK07582 148 VCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAI 227 (366)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998777777888999999999999999999999999987 468888888888888999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
++++.+|+++++++++..|++++.+|++.++++|+++|.|.+|+||++++||+|+++++||+|+|+|++|+++ +.+++.
T Consensus 228 ~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~ 306 (366)
T PRK07582 228 PGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAE 306 (366)
T ss_pred CCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 578899
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+|+++++++.+++|||+++|++.++..+ ..++++++||||+|+||++|+|+||++||+++
T Consensus 307 ~~~~~l~~~~~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 307 RFVAASRLVVAATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred HHHHhCCcceecccCCCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999987543211 22377899999999999999999999999875
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=5e-59 Score=488.52 Aligned_cols=362 Identities=34% Similarity=0.592 Sum_probs=330.9
Q ss_pred CCCccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEE
Q 009523 141 LSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTV 220 (532)
Q Consensus 141 ~~~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i 220 (532)
|++++|..+|.|...+ ..+++++||||+|+||.|++.+ +..+|.|+||+||+.+.||++||+++|++.++
T Consensus 2 ~~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~ 71 (366)
T PRK08247 2 MSTIETKLAQIGNRSD--ERTGTVNPPVYFSTAYRHEGIG--------ESTGFDYSRTGNPTRGVLEQAIADLEGGDQGF 71 (366)
T ss_pred CCCcchhheeCCCCCC--CCCCCccCCcccCcccccCCCC--------CcCCccccCCCCchHHHHHHHHHHHhCCCcEE
Confidence 4568899999996542 2368999999999999887632 23479999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCC
Q 009523 221 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 300 (532)
Q Consensus 221 ~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~Npt 300 (532)
+++||++|+.+++ .++++||+||++++.|+++...+...++.+|+++.+++..|++++++++++ +|++|++|+|+||+
T Consensus 72 ~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklv~le~P~NP~ 149 (366)
T PRK08247 72 ACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITP-NTKAIFIETPTNPL 149 (366)
T ss_pred EEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhccc-CceEEEEECCCCCC
Confidence 9999999998765 678999999999999999988887778889999999999999999999987 79999999999999
Q ss_pred CcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcC
Q 009523 301 LRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 379 (532)
Q Consensus 301 G~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G 379 (532)
|.+.|+++|+++|+++|+++|+|++|+.++...+...|+|++++|+||+++|++++++|+++++ +++.++++..+...|
T Consensus 150 ~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g 229 (366)
T PRK08247 150 MQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAG 229 (366)
T ss_pred CcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988887788888999999999999999999999999986 678888887777778
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH
Q 009523 380 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 459 (532)
Q Consensus 380 ~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~ 459 (532)
..++++.+|+++++++++..|++++.+|++.++++|+++|++..|.||+ .|++++|++++ .+.
T Consensus 230 ~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~-~~~ 292 (366)
T PRK08247 230 AVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQD-EEW 292 (366)
T ss_pred CCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECC-HHH
Confidence 8899999999999999999999999999999999999999999999986 47899999974 567
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+|++.++++.+++|||+.++++.+|+.++|..++++.|...|+++++||||+|+|+.+|||+||++||++
T Consensus 293 ~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~ 364 (366)
T PRK08247 293 VNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQ 364 (366)
T ss_pred HHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 789999999999999999999999999999999999999999999999999999999999999999999975
No 48
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-31 Score=270.32 Aligned_cols=319 Identities=19% Similarity=0.207 Sum_probs=241.8
Q ss_pred HHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh--c----cCCCEEEEcCCCCcchHH
Q 009523 184 DFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL--V----PAGGHIVTTTDCYRKTRI 255 (532)
Q Consensus 184 ~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al--l----~~Gd~VIv~~~~y~~t~~ 255 (532)
..|+|+++.|.|||......++.|+++|+++|++ +.+++++|+|+++++++.. . +.|.|||++..+|++..+
T Consensus 27 ~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~ 106 (386)
T COG1104 27 EVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLN 106 (386)
T ss_pred hhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHH
Confidence 4567888899999999999999999999999983 4666666779999999873 2 247899999999999998
Q ss_pred HHHHhcccCCcEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-
Q 009523 256 FIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP- 329 (532)
Q Consensus 256 ~~~~~l~~~Gv~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~- 329 (532)
.++.+ +..|++|++++++ |+++|+++|++ +|.+|.+...||.+|.++|+++|.++|+++|+++++|.+++.+
T Consensus 107 ~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~-~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gk 184 (386)
T COG1104 107 TCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRP-DTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGK 184 (386)
T ss_pred HHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCC-CceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCc
Confidence 88655 7889999999876 89999999998 7999999999999999999999999999999999999998764
Q ss_pred CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHH-HHHH-HHH---hhhcCCCccHHHHHH----HHHhHHHHHHH
Q 009523 330 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQI-RNL---HHVLGGALNPNAAYL----IIRGMKTLHLR 400 (532)
Q Consensus 330 ~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l-~~~---~~~~G~~~~~~~a~l----~l~~l~tl~~r 400 (532)
++.+...+++|++..|.||+.|+.| .|+++.++.. +..+ ..- +....++.+...... +....+.+...
T Consensus 185 ipi~~~~~~vD~ls~SaHK~~GpkG---iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~ 261 (386)
T COG1104 185 IPIDLEELGVDLLSFSAHKFGGPKG---IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEE 261 (386)
T ss_pred eeccccccCcceEEeehhhccCCCc---eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777899999999999999998 5666655422 1211 111 111223333332222 22233445555
Q ss_pred HHHHHHHHHHHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009523 401 VQQQNSTALRMAKILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
..+......++.+.|.+. |.+... +- +. .+.++++.|.+++ ...+.++-.|+..+|++|.|++
T Consensus 262 ~~~~~~lr~~l~~~l~~~~p~~~~~---g~---~~--------~rlP~~~~~~f~g--v~gE~ll~~L~~~gI~vStGSA 325 (386)
T COG1104 262 NARLRKLRDRLEDGLLEIIPDVYLN---GD---DE--------PRLPNILNFSFPG--VEGESLLLALDLAGIAVSTGSA 325 (386)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEc---CC---cc--------cCCCCeEEEEeCC--CcHHHHHHhccccCeEEecccc
Confidence 556666667777777765 544211 11 11 2357799999987 5678888899999999999977
Q ss_pred ccccccCccccccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 480 ESIVDQPAIMSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 480 ~sl~~~pa~~s~~~~~~~~~~~~gi~----~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
++ +....+...+.++|++ .+.||||+|..++++.++.+.++|.+
T Consensus 326 Cs--------S~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 326 CS--------SGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred cc--------CCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 54 3334567888999986 46899999998888877777776653
No 49
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.5e-26 Score=242.75 Aligned_cols=306 Identities=20% Similarity=0.230 Sum_probs=224.6
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~-~Ai~~al~al---l~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
.|..+.+.....++.|+++|+++|++ +.|+|+.|+ ++++.+..++ +++||+||+++.+|+++...+..+.++.|
T Consensus 57 ~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~G 136 (405)
T COG0520 57 AHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTG 136 (405)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcC
Confidence 34455555567888999999999985 556666665 9999999988 69999999999999999888877788889
Q ss_pred cEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCC
Q 009523 266 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGA 339 (532)
Q Consensus 266 v~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~ga 339 (532)
+++++++.+ +++++++.+++ +||+|.+...+|.||.+.|+++|+++||++|++++||.+++.+ .+.+..++|+
T Consensus 137 a~v~~i~~~~~g~~~~~~~~~~i~~-~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~ 215 (405)
T COG0520 137 AKVRVIPLDDDGLLDLDALEKLITP-KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGC 215 (405)
T ss_pred cEEEEEecCCCCCcCHHHHHHhcCC-CceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCC
Confidence 999988753 58999998887 7999999999999999999999999999999999999998765 4567778899
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh----------------------hcCCCccHHHHHHHHHhHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTL 397 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~----------------------~~G~~~~~~~a~l~l~~l~tl 397 (532)
|++++|.|||+.|+. ..|++++++++++.+..... .-.++++....+.+..+++.+
T Consensus 216 Df~afsgHKwl~gP~--GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~ 293 (405)
T COG0520 216 DFLAFSGHKWLLGPT--GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYL 293 (405)
T ss_pred CEEEEcccccccCCC--ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHH
Confidence 999999999666663 27999999998887632110 111223333333333333332
Q ss_pred H-----HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009523 398 H-----LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 472 (532)
Q Consensus 398 ~-----~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i 472 (532)
. ...++..+..+++.+.|++.|+++-. .|... ..+++++|.+++. ....+...|...+|
T Consensus 294 ~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~-g~~~~-------------~r~~~vsF~v~~~--~~~dv~~~L~~~gI 357 (405)
T COG0520 294 LEIGMEAIEAHERELTEYLLEGLSELPGVEIY-GPPDA-------------DRGGIVSFNVKGI--HPHDVATLLDEKGI 357 (405)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCcc-------------cCceEEEEEeCCC--CHHHHHHHHHhCCe
Confidence 2 22233446677788888888887543 33211 1478999999873 22333444444568
Q ss_pred eecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 473 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 473 ~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
++..|..+.. |. .+..++ .+.+|+|+++.++++.++.|.++|++
T Consensus 358 ~vr~g~~ca~---p~-----------~~~~~~-~~~iR~S~~~YNt~edid~l~~aL~~ 401 (405)
T COG0520 358 AVRAGHHCAQ---PL-----------HRLLGV-DATIRASLHLYNTEEDVDRLLEALKK 401 (405)
T ss_pred EEEecccccc---HH-----------HHhcCC-CCceEEEEeecCCHHHHHHHHHHHHH
Confidence 8888855321 11 122344 34499999999999999999999875
No 50
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=4.7e-26 Score=241.65 Aligned_cols=294 Identities=16% Similarity=0.173 Sum_probs=207.2
Q ss_pred CchhHHHHHHHHHhhhCC-C-c-EEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 199 GNPTTVVVEEKMSALEGA-E-S-TVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga-~-~-~i~~sSG~~Ai~~al~al----l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.....+.+++++|+++|+ + + +++++|+++++++++.++ +++||+|++++++|++.+..+....+..|++++.+
T Consensus 61 ~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 140 (401)
T PRK10874 61 LTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKL 140 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEE
Confidence 345577889999999997 3 3 455566679999999887 47999999999999987666656667789998887
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEEC
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 345 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S 345 (532)
+. .|++++++++++ +|++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+....++|+++.|
T Consensus 141 ~~~~~~~~d~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s 219 (401)
T PRK10874 141 PLGADRLPDVDLLPELITP-RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFS 219 (401)
T ss_pred ecCCCCcCCHHHHHHhcCc-CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEe
Confidence 64 378999999987 7999999999999999999999999999999999999998643 3344445689999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHHH-----H
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTLH-----L 399 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~~~~~a~l~l~~l~tl~-----~ 399 (532)
+||++|++| .|+++.++++++.+..+.. ...++.+......+..+++.+. .
T Consensus 220 ~~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~ 296 (401)
T PRK10874 220 GHKLYGPTG---IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQ 296 (401)
T ss_pred cccccCCCc---cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHH
Confidence 999888776 5899999888876543210 0012233333333334444332 1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009523 400 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
..++..+.++++.+.|+++|++..+..| .+++++|.+++. ....+.+.|...++.++.|..
T Consensus 297 ~~~~~~~l~~~l~~~l~~~~g~~~~~~~-----------------~~~i~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~ 357 (401)
T PRK10874 297 AESWSRSLATLAEDALAKLPGFRSFRCQ-----------------DSSLLAFDFAGV--HHSDLVTLLAEYGIALRAGQH 357 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCCC-----------------CCcEEEEEECCc--CHHHHHHHHHHCCcEEecccc
Confidence 2234445667777788777766422111 245888888652 224455556556788877754
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 480 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 480 ~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
++ ......+|. .+.||+|++..++++.++.+.++|+
T Consensus 358 ~~--------------~~~~~~~g~-~~~iRiS~~~~nt~edid~ll~al~ 393 (401)
T PRK10874 358 CA--------------QPLLAALGV-TGTLRASFAPYNTQSDVDALVNAVD 393 (401)
T ss_pred ch--------------HHHHHHhCC-CCEEEEEecccCCHHHHHHHHHHHH
Confidence 22 111223453 4799999998777777777776665
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=1.9e-25 Score=237.56 Aligned_cols=297 Identities=16% Similarity=0.162 Sum_probs=210.1
Q ss_pred CCchhHHHHHHHHHhhhCC-C--cEEEeCCHHHHHHHHHHH----hccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 198 YGNPTTVVVEEKMSALEGA-E--STVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga-~--~~i~~sSG~~Ai~~al~a----ll~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
......+++++++|+++|+ + +++++++++++++.++.+ ++++||+|++++++|++....+...++..|++++.
T Consensus 64 ~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 143 (406)
T PRK09295 64 QATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRV 143 (406)
T ss_pred HHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 3445678899999999996 2 345555556999988876 46899999999999998776665666778999888
Q ss_pred eCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEE
Q 009523 271 IDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLH 344 (532)
Q Consensus 271 vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~ 344 (532)
++. .|+++|++++++ +|++|++++|+||||.++|+++|.++|+++|+++++|++++.+. ..+...+++|+++.
T Consensus 144 v~~~~~~~~d~~~l~~~i~~-~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~ 222 (406)
T PRK09295 144 IPLNPDGTLQLETLPALFDE-RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVF 222 (406)
T ss_pred EecCCCCCCCHHHHHHhcCC-CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEe
Confidence 864 378999999987 79999999999999999999999999999999999999987653 23444578999999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHh----------------------hhcCCCccHHHHHHHHHhHHHHH----
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAYLIIRGMKTLH---- 398 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----------------------~~~G~~~~~~~a~l~l~~l~tl~---- 398 (532)
|+||.+|++| .|+++.++++++.+.... +...++.+....+.+..+++.+.
T Consensus 223 s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~ 299 (406)
T PRK09295 223 SGHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGL 299 (406)
T ss_pred ehhhccCCCC---cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCH
Confidence 9999888776 588888888766543210 01122334433333344444332
Q ss_pred -HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009523 399 -LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 399 -~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G 477 (532)
...++..+.++++.+.|.+.++++ +..|. ..+++++|.+++. ....+...|...++.++.|
T Consensus 300 ~~i~~~~~~l~~~l~~~l~~~~~~~-~~~~~---------------~~~~iv~~~~~~~--~~~~~~~~L~~~gI~v~~g 361 (406)
T PRK09295 300 NNIAEYEQNLMHYALSQLESVPDLT-LYGPQ---------------NRLGVIAFNLGKH--HAYDVGSFLDNYGIAVRTG 361 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEE-EeCCC---------------CCceEEEEEECCc--CHHHHHHHHHhCCeEEecc
Confidence 222344455667777777776653 32221 0246899998752 2233444555668888877
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..++. + ....+|. ++.||+|++..++++.++.|.++|+.
T Consensus 362 ~~c~~---~-----------~~~~~~~-~~~iRiS~~~ynt~~did~l~~~l~~ 400 (406)
T PRK09295 362 HHCAM---P-----------LMAYYNV-PAMCRASLAMYNTHEEVDRLVAGLQR 400 (406)
T ss_pred ccchH---H-----------HHHHHCC-CCEEEEEccCCCCHHHHHHHHHHHHH
Confidence 54321 1 1223443 36899999999998888999888864
No 52
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=1.9e-25 Score=236.81 Aligned_cols=292 Identities=16% Similarity=0.164 Sum_probs=205.6
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~al----l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+.+++.+|+++|++ ++++++++++++++++.++ +++||+|++++++|++....+...++..|++++.++.
T Consensus 60 ~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 139 (398)
T TIGR03392 60 ARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI 139 (398)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec
Confidence 45677899999999973 3455666679999999887 5799999999999998765555566778999888864
Q ss_pred C-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCc
Q 009523 274 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 347 (532)
Q Consensus 274 ~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~s 347 (532)
+ |++++++++++ +|++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+....++|+++.|+|
T Consensus 140 ~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~ 218 (398)
T TIGR03392 140 GADLLPDIRQLPELLTP-RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGH 218 (398)
T ss_pred CCCCCcCHHHHHHHhcc-CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecc
Confidence 2 78999999987 6999999999999999999999999999999999999998643 333444568999999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH-----HHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRV 401 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~~~~~a~l~l~~l~tl-----~~r~ 401 (532)
|.+|+.| .|+++.++++++.+..+.. ...++.+......+..+++.+ ....
T Consensus 219 K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~ 295 (398)
T TIGR03392 219 KLYGPTG---IGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAE 295 (398)
T ss_pred cccCCCc---eEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9888765 6899999888776643210 011233332333333333332 1223
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccc
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCES 481 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~s 481 (532)
++..+.++++.+.|++.+++.....| .+++++|.+++. ....+.+.|...++.++.|..++
T Consensus 296 ~~~~~l~~~l~~~l~~l~g~~~~~~~-----------------~~~i~~~~~~~~--~~~~l~~~L~~~gI~v~~g~~~~ 356 (398)
T TIGR03392 296 AWSVSLADLAEERLAQLPGFRSFRCP-----------------GSSLLAFDFAGV--HHSDLAALLAESGIALRAGQHCA 356 (398)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCC-----------------CCcEEEEEeCCc--CHHHHHHHHHhCCEEEecCccch
Confidence 34445667777777777765422111 145888888752 23455666666788888775432
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 482 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 482 l~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
. .....+|. ++.||+|++..++++.++.+.++|+
T Consensus 357 ~--------------~~~~~~g~-~~~iRvS~~~~~t~~ei~~l~~~l~ 390 (398)
T TIGR03392 357 Q--------------PLMAALGV-SGTLRASFAPYNTQQDVDALVDAVG 390 (398)
T ss_pred H--------------HHHHHhCC-CCEEEEEeeccCCHHHHHHHHHHHH
Confidence 1 11123343 4799999998777777777766665
No 53
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=230.40 Aligned_cols=287 Identities=16% Similarity=0.187 Sum_probs=198.5
Q ss_pred chhHHHHHHHHHhhhCC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 200 NPTTVVVEEKMSALEGA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga----~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
.+..+.+++.+++..|. ++.+++++| ++++..++.+++++||+|++++|.|..... .++..|+++..++.+
T Consensus 68 ~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~ 143 (389)
T PRK05957 68 PPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM----AITMAGCQPILVPTD 143 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH----HHHhcCCEEEEeecC
Confidence 35567778888887774 344555555 589999999999999999999999987543 335568888877542
Q ss_pred -----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----ccc----cc
Q 009523 275 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL----SL 337 (532)
Q Consensus 275 -----dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-----~~l----~~ 337 (532)
|++++++++++ ++++|++.+|+||||.+++ +++|+++|+++|+++|+|++|...... ... ..
T Consensus 144 ~~~~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 222 (389)
T PRK05957 144 DNYQLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSG 222 (389)
T ss_pred CCCCcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCcc
Confidence 78999999987 6999999999999999998 788999999999999999997643211 111 11
Q ss_pred CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH
Q 009523 338 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAK 413 (532)
Q Consensus 338 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~ 413 (532)
...+++.|+||.+|.+| .+.|++++++++++++.......+...+......+...++. +....++..++++.+.+
T Consensus 223 ~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~ 301 (389)
T PRK05957 223 NHTISLYSLSKAYGFAS-WRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLK 301 (389)
T ss_pred CcEEEEecchhhccCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 24588999999998776 46899999999999998776655544454555544444432 34444555677777888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCcccccc
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYW 492 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~ 492 (532)
.|++.+++..+..| ..|.++|++++.+ .....|.+.+ +..++.+..|..+..
T Consensus 302 ~L~~~~~~~~~~~~----------------~gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~---------- 354 (389)
T PRK05957 302 SLGQLQDRCTLHPA----------------NGAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGM---------- 354 (389)
T ss_pred HHHhcCCCccccCC----------------CeeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCC----------
Confidence 88876543222211 1356788888643 2344555665 345788887754320
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHHh
Q 009523 493 DLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQALH 530 (532)
Q Consensus 493 ~~~~~~~~~~gi~~~~IRlSvG~ed~~dl---i~dL~~AL~ 530 (532)
..++++|||+|..+.+++ ++.|.+.++
T Consensus 355 -----------~~~~~iRis~~~~~~~~l~~~~~~l~~~~~ 384 (389)
T PRK05957 355 -----------KNGCYLRIAYGALQKATAKEGIERLVQGLK 384 (389)
T ss_pred -----------CCCCEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 014699999997555444 444444443
No 54
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.7e-24 Score=227.27 Aligned_cols=276 Identities=18% Similarity=0.201 Sum_probs=196.6
Q ss_pred CchhHHHHHHHHHhhh----CC----Cc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEE
Q 009523 199 GNPTTVVVEEKMSALE----GA----ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 269 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~----ga----~~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~ 269 (532)
+.....+||+++|+.+ |. ++ +++++++++|+..++++++.|||+||+++|.|..... .....|.++.
T Consensus 63 ~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~----~~~~~gg~~v 138 (393)
T COG0436 63 PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEA----AVKLAGGKPV 138 (393)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH----HHHhcCCEEE
Confidence 4555667777777665 31 34 6666666799999999999999999999999988553 3445577777
Q ss_pred EeCC-----C---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----c
Q 009523 270 VIDP-----A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 333 (532)
Q Consensus 270 ~vd~-----~---dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-----~ 333 (532)
.++. + |+++|++++++ +||+|++++||||||.+++ +++|+++|++||+++|.||+|.....- .
T Consensus 139 ~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s 217 (393)
T COG0436 139 PVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPS 217 (393)
T ss_pred EEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCC
Confidence 7662 1 68999999998 8999999999999999997 678899999999999999997653221 1
Q ss_pred cccc----CCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHH
Q 009523 334 ALSL----GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQ 402 (532)
Q Consensus 334 ~l~~----gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~r~~ 402 (532)
.+.. ..-|+++|+||.++..|. +.||++++ +++++.+.+.+.....+.+...++++..+++. .....+
T Consensus 218 ~~~~~~~~~~~i~i~s~SK~~~mtGw-RvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~ 296 (393)
T COG0436 218 ILELAGARDRTITINSFSKTYGMTGW-RIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMRE 296 (393)
T ss_pred HhhcCCCcceEEEEeccccccccccc-ceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHH
Confidence 1211 235899999999997775 57899988 78888888776666655666655555555542 222224
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH-cCCCceeecCCCccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCES 481 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~-L~~~~i~vs~G~~~s 481 (532)
...++++.+.+.|.+.+++..+..|. ++..++..++.. .+...|... |+..++++..|..+.
T Consensus 297 ~~~~rrd~l~~~l~~~~g~~~~~~p~----------------Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v~PG~~Fg 359 (393)
T COG0436 297 EYRERRDLLVEALNEIGGLSVVKPPE----------------GAFYLFPKIPEL-LDSEEFAKKLLEEAGVAVVPGSGFG 359 (393)
T ss_pred HHHHHHHHHHHHHHhcCCeeeccCCC----------------eeEEEEeecCCC-CCHHHHHHHHHHhCCEEEecccccC
Confidence 56678888899999887765554453 345677777642 222333333 234478888886643
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC
Q 009523 482 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED 517 (532)
Q Consensus 482 l~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed 517 (532)
.- ..+++||||++..+
T Consensus 360 ~~--------------------~g~~~vRis~~~~~ 375 (393)
T COG0436 360 EP--------------------PGEGYVRLSLATSE 375 (393)
T ss_pred CC--------------------CCCCeEEEEEecCH
Confidence 10 13689999999765
No 55
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=230.55 Aligned_cols=284 Identities=15% Similarity=0.201 Sum_probs=191.7
Q ss_pred hHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 202 TTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga-----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
..+.+.+.+++.+|. +++++++++++++..++.+++++||+|+++.|+|+.... .++..|.++..++.
T Consensus 83 LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~----~~~~~g~~v~~v~~~~~ 158 (405)
T PRK06207 83 IRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRK----LVEFFEGEMVPVQLDYL 158 (405)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEecccc
Confidence 334444455555563 345555555699999999999999999999999987553 44556777665543
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccc-c--
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL-S-- 336 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l-~-- 336 (532)
.|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..... ..+. .
T Consensus 159 ~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~ 237 (405)
T PRK06207 159 SADKRAGLDLDQLEEAFKA-GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALP 237 (405)
T ss_pred CcccCCCcCHHHHHHhhhh-cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCC
Confidence 278999999877 6999999999999999998 66788889999999999999875321 1111 1
Q ss_pred --cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHH
Q 009523 337 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALR 410 (532)
Q Consensus 337 --~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a~~ 410 (532)
....+++.|+||.++.+| .+.||+++++++++++...........+.+....+...++ .+..++++..+++..
T Consensus 238 ~~~~~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~ 316 (405)
T PRK06207 238 IDPENVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDD 316 (405)
T ss_pred CCcCcEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 123489999999998555 5689999999999988876655544444444444443442 245556666677777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~ 489 (532)
+.+.|++++++. +..|. .|.++|++++........|.+.+. ..++.+..|..+.
T Consensus 317 l~~~L~~~~~~~-~~~p~----------------gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~-------- 371 (405)
T PRK06207 317 LLRVLRGVEGVF-VRAPQ----------------AGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFS-------- 371 (405)
T ss_pred HHHHHhcCCCce-ecCCC----------------eeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhC--------
Confidence 888887765442 22221 467889998742123455666663 4577777775432
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHHh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQALH 530 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dl---i~dL~~AL~ 530 (532)
+..++++|||++.+ .+++ ++.|.++++
T Consensus 372 -------------~~~~~~~Ris~~~~-~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 372 -------------PHTADSIRLNFSQD-HAAAVAAAERIAQLIE 401 (405)
T ss_pred -------------CCCCCeEEEEecCC-HHHHHHHHHHHHHHHH
Confidence 01257999999973 3333 444444443
No 56
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=1.6e-24 Score=231.81 Aligned_cols=299 Identities=18% Similarity=0.200 Sum_probs=208.9
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHH----hccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~a----ll~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+++++.+++++|++ +++++++++++++.++.+ .+++||+|+++.++|++....+....+..|++++.++.
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~ 155 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL 155 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec
Confidence 44678999999999972 455666667999988876 36899999999999998776666666778999888764
Q ss_pred C-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCc
Q 009523 274 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 347 (532)
Q Consensus 274 ~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~s 347 (532)
+ |++++++++++ +|++|++++|+||||.++|+++|.++|+++|+++++|++++.+ ...+..++++|+++.|+|
T Consensus 156 ~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 234 (424)
T PLN02855 156 TPDEVLDVEQLKELLSE-KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSH 234 (424)
T ss_pred CCCCCcCHHHHHHHhcc-CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecc
Confidence 2 78999999987 7999999999999999999999999999999999999998654 334445678999999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH-----HHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRV 401 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~~~~~a~l~l~~l~tl-----~~r~ 401 (532)
|++|++| .|+++.++++++++..+.. ...++.+....+.+..+++.+ ....
T Consensus 235 K~~gp~G---~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (424)
T PLN02855 235 KMCGPTG---IGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIH 311 (424)
T ss_pred cccCCCc---cEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9887665 6888888887766542210 001122222222233333322 2222
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCcc
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCE 480 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~~~ 480 (532)
++..+.++++.+.|++.++++ +..|.- +.+. ..+++++|.+++ .....+.+.|... ++.++.|..+
T Consensus 312 ~~~~~l~~~l~~~L~~~~g~~-i~~~~~-~~~~---------~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c 378 (424)
T PLN02855 312 EYEVELGTYLYEKLSSVPGVR-IYGPKP-SEGV---------GRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHC 378 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCc-cccc---------CcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhh
Confidence 344456667777777777764 333321 1010 136799999875 2344567777655 8888877553
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+. . ....+|+ ++.||+|++..++++.++.|.++|++
T Consensus 379 ~~----~----------~~~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 379 AQ----P----------LHRYLGV-NASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hH----H----------HHHHhCC-CCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 31 0 1123454 46899999998877777777777653
No 57
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=1.4e-24 Score=229.91 Aligned_cols=299 Identities=14% Similarity=0.120 Sum_probs=203.5
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
|+|.. ++.+||+++|+++|.+++++++||+.|+..++.+++++||+|+++++.|+++...+ .+ .+.++.+++..
T Consensus 39 yg~~~--~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~--~l--~~~~~~~~~~~ 112 (392)
T PLN03227 39 YGTID--AHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGV--SL--SRANVRWFRHN 112 (392)
T ss_pred cCChH--HHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH--HH--cCCeEEEeCCC
Confidence 66655 78999999999999999999999999999999999999999999999999876543 12 24566667776
Q ss_pred CHHHHHH---hhcC----------CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---------
Q 009523 275 DMEGLEA---ALNN----------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 332 (532)
Q Consensus 275 dle~Le~---al~~----------~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~--------- 332 (532)
|++++++ .+++ .++++|++|+|+|++|.+.|+++|.++|++||+++|+||+++.+...
T Consensus 113 d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~ 192 (392)
T PLN03227 113 DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEH 192 (392)
T ss_pred CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHH
Confidence 6665555 3321 25899999999999999999999999999999999999998643221
Q ss_pred ---cccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH--hhhcCCCccHHHHHHHHHhHHHH---HHHHHHH
Q 009523 333 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKTL---HLRVQQQ 404 (532)
Q Consensus 333 ---~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G~~~~~~~a~l~l~~l~tl---~~r~~~~ 404 (532)
.| ..++|+++.|++|++|+ ++|++++++++++.++.. ...+++.++|..++.++..++.. ..++++.
T Consensus 193 ~g~~p-~~~~Div~~slsk~~g~----~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 193 AGLKP-MVHAEIVTFSLENAFGS----VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred cCCCC-CCCceEEEeechhhhhc----cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 12 24779999999999874 468888998888776542 23466666777666665555432 3456667
Q ss_pred HHHHHHHHHHHHh--CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH--------HHHHHHHHcCCCceee
Q 009523 405 NSTALRMAKILEA--HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--------ATIKFIDALKIPYIAP 474 (532)
Q Consensus 405 ~~~a~~la~~L~~--~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~--------~~~~~l~~L~~~~i~v 474 (532)
.++.+++.+.|++ +|.+..+.- ++.-. ....|.|+.+++.+... ....+.+.+...++.+
T Consensus 268 ~~~~~~l~~~L~~~~~~~~~~~rg-~~~~~---------~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 337 (392)
T PLN03227 268 HDSIANLYSTLTNSSHPYALKLRN-RLVIT---------SDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAV 337 (392)
T ss_pred HHHHHHHHHHHHhcCCcccccccc-ccccC---------CCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEE
Confidence 7888888888874 232322221 11000 01247789999964211 1235665655445444
Q ss_pred cCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 475 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 475 s~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..-+.......| -+++..||+++...++++.++.+.++|+
T Consensus 338 ~~~~~~~~~~~~----------------~~P~~~iR~~~~~~~t~eei~~~~~~l~ 377 (392)
T PLN03227 338 VSTGGHVKKFLQ----------------LVPPPCLRVVANASHTREDIDKLLTVLG 377 (392)
T ss_pred EecccccCCcCC----------------CCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 211111111011 1235679999988666555555554443
No 58
>PRK07324 transaminase; Validated
Probab=99.94 E-value=1.7e-24 Score=227.78 Aligned_cols=282 Identities=16% Similarity=0.196 Sum_probs=193.2
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEE
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 269 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~ 269 (532)
+.|+.. .....|++++|++++. +++++++++++|+..++.+++.+||+|+++.|.|.... ..++..|++++
T Consensus 56 ~~Y~~~--~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v~ 129 (373)
T PRK07324 56 LTYGWI--EGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY----DIPESLGAEVD 129 (373)
T ss_pred ccCCCC--CCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEE
Confidence 455542 2356899999998753 45666666679999999999999999999999997744 34556788887
Q ss_pred EeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----ccc
Q 009523 270 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL 335 (532)
Q Consensus 270 ~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~l 335 (532)
.++. .|++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... ...
T Consensus 130 ~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~ 208 (373)
T PRK07324 130 YWQLKEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIA 208 (373)
T ss_pred EEecccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChh
Confidence 7763 278899998877 7999999999999999999 888999999999999999997653221 111
Q ss_pred c-cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHH-HHHHHHHHH
Q 009523 336 S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRV-QQQNSTALR 410 (532)
Q Consensus 336 ~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~-~~~~~~a~~ 410 (532)
. ....+++.|+||.+|.+| .+.||+++++++++.++..+.....+.+....+++...++. +..++ +...++.+.
T Consensus 209 ~~~~~~I~~~s~SK~~~~~G-~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~ 287 (373)
T PRK07324 209 DLYEKGISTNSMSKTYSLPG-IRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAI 287 (373)
T ss_pred hccCCEEEEecchhhcCCcc-ceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 1 123588999999998665 46799999999999988876544334445555554444432 22222 333456677
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
+.++|++++.+. +..|. .|..+++.++.+ .....|.+.+ +..++.+..|..+.
T Consensus 288 l~~~l~~~~~~~-~~~p~----------------gg~~~~i~~~~~-~~~~~~~~~ll~~~gv~v~pg~~F~-------- 341 (373)
T PRK07324 288 LDEWVAKEPRVS-YVKPK----------------AVSTSFVKLDVD-MPSEDFCLKLLKETGVLLVPGNRFD-------- 341 (373)
T ss_pred HHHHHhcCCCce-EECCC----------------ceEEEEEEeCCC-CCHHHHHHHHHHhcCEEEECccccC--------
Confidence 778888776553 23332 244556666532 2344555554 44577777765431
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHH
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKAD 524 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~d 524 (532)
.++++|||++.. .+.+.+.
T Consensus 342 ---------------~~~~iRis~~~~-~~~l~~~ 360 (373)
T PRK07324 342 ---------------LEGHVRIGYCCD-TETLKKG 360 (373)
T ss_pred ---------------CCCeEEEEecCC-HHHHHHH
Confidence 146899999963 3443333
No 59
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=2.3e-24 Score=228.65 Aligned_cols=297 Identities=21% Similarity=0.234 Sum_probs=206.8
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 200 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~al----l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
....+++++.+++++|++ ++++++++++++.+++.++ +++||+|+++++.|++....+....+..|++++.++
T Consensus 61 ~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~ 140 (403)
T TIGR01979 61 TEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIP 140 (403)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEe
Confidence 345778999999999975 4556666669998888764 578999999999999877666566667899988886
Q ss_pred C-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECC
Q 009523 273 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 346 (532)
Q Consensus 273 ~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~ 346 (532)
. .|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. ..+....++|+++.|+
T Consensus 141 ~~~~~~~~~~~l~~~i~~-~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~ 219 (403)
T TIGR01979 141 LDDDGTLDLDDLEKLLTE-KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSG 219 (403)
T ss_pred cCCCCCCCHHHHHHHhcc-CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEec
Confidence 4 278999999987 79999999999999999999999999999999999999987653 2444567899999999
Q ss_pred ccccCCCCCcEEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH-----HHH
Q 009523 347 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLR 400 (532)
Q Consensus 347 sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~~~~~a~l~l~~l~tl-----~~r 400 (532)
||++|+.| .|+++.++++++.+..... ...++.+....+.+..+++.+ ...
T Consensus 220 ~K~~gp~G---~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~ 296 (403)
T TIGR01979 220 HKMYGPTG---IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENI 296 (403)
T ss_pred ccccCCCC---ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHH
Confidence 99998665 6888888887766532110 001223333333333333322 223
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009523 401 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 480 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~ 480 (532)
.++..+.++++.+.|++.++++ +..|.-+ ...++++.|.+++. ....+.+.|+..++.++.|..+
T Consensus 297 ~~~~~~l~~~l~~~l~~~~g~~-~~~~~~~------------~~~~~~v~~~~~~~--~~~~~~~~L~~~gI~v~~g~~~ 361 (403)
T TIGR01979 297 EAHEHELTAYALERLGEIPGLR-IYGPRDA------------EDRGGIISFNVEGV--HPHDVGTILDEEGIAVRSGHHC 361 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCEE-EeCCCCc------------cccCceEEEEeCCc--CHHHHHHHHhhCCEEEcchhhh
Confidence 3455566777777787777654 3333211 01367899998752 2345666777778888877542
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+. | ....+|. ++.||||++..++++.++.+.++|+
T Consensus 362 ~~---~-----------~~~~~~~-~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 362 AQ---P-----------LMRRFGV-PATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred hH---H-----------HHHHhCC-CCEEEEEeccCCCHHHHHHHHHHHH
Confidence 21 1 1122333 4789999998766666666666654
No 60
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=1.4e-24 Score=227.76 Aligned_cols=293 Identities=20% Similarity=0.243 Sum_probs=206.7
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~---~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
....++++.+++++|.+ +.++++||++++..++.++.. +||+|++++++|++....+....+..|.++++++.+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (373)
T cd06453 43 DAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD 122 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC
Confidence 44667889999999976 566677778999999999887 899999999999987655555556778888888643
Q ss_pred -----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCcc
Q 009523 275 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 348 (532)
Q Consensus 275 -----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~sK 348 (532)
|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+....|+|+++.|++|
T Consensus 123 ~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 201 (373)
T cd06453 123 DDGQLDLEALEKLLTE-RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK 201 (373)
T ss_pred CCCCcCHHHHHHHhcC-CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEecccc
Confidence 78999999987 799999999999999999999999999999999999999765432 33345689999999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHhhh--------------------c-CCCccHHHHHHHHHhHHH-----HHHHHH
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------L-GGALNPNAAYLIIRGMKT-----LHLRVQ 402 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------------------~-G~~~~~~~a~l~l~~l~t-----l~~r~~ 402 (532)
++++.+ +|+++.++++++.++..... + .++.+......+..+++. +..+.+
T Consensus 202 ~~~~~g---~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~ 278 (373)
T cd06453 202 MLGPTG---IGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAA 278 (373)
T ss_pred ccCCCC---cEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 999854 68898988888766543210 0 112222222222223332 233344
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
+..+.++++.+.|++++.+..+ .+. ...+++++|.+++ ....++.+.|+..++.++.|..+..
T Consensus 279 ~~~~~~~~l~~~l~~~~~~~~~-~~~--------------~~~~~~~~~~~~~--~~~~~i~~~l~~~gi~i~~g~~~~~ 341 (373)
T cd06453 279 HEHELTAYALERLSEIPGVRVY-GDA--------------EDRAGVVSFNLEG--IHPHDVATILDQYGIAVRAGHHCAQ 341 (373)
T ss_pred HHHHHHHHHHHHHhcCCCeEEe-CCc--------------cccCCeEEEEECC--cCHHHHHHHHHHCCEEeccCccchh
Confidence 5556777788888877765433 111 0135688998864 2344566666656777766543210
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
| ....+|. ++.||+|++..++++.++.+.++|
T Consensus 342 ---~-----------~~~~~~~-~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 342 ---P-----------LMRRLGV-PGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred ---H-----------HHHHhCC-CCeEEEEecCCCCHHHHHHHHhhC
Confidence 0 1112332 478999999988888777777664
No 61
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=5.2e-24 Score=222.99 Aligned_cols=223 Identities=13% Similarity=0.228 Sum_probs=171.0
Q ss_pred CCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 194 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 194 ~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..+...+|...++++++|+++|.++++++++|++++..++.+++++||+|+++.+.|.+.+. .+...|++++.++.
T Consensus 37 ~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~ 112 (361)
T cd06452 37 RLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYV----AAERAGLNVREVPN 112 (361)
T ss_pred ccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHH----HHHhcCCEEEEEec
Confidence 34445678999999999999999888888888899999999999999999999999887653 35667888887753
Q ss_pred -------CCHHHHHHhhcC------CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCC
Q 009523 274 -------ADMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGA 339 (532)
Q Consensus 274 -------~dle~Le~al~~------~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~ga 339 (532)
.|++++++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+. .....+.|+
T Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~ 192 (361)
T cd06452 113 TGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGA 192 (361)
T ss_pred CCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCC
Confidence 378899988862 268999999999999999999999999999999999999987543 345566789
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhh--------cCCCccHHHHHHHHHhHHHHH---HHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTA 408 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------~G~~~~~~~a~l~l~~l~tl~---~r~~~~~~~a 408 (532)
|+++.|+||++++++ .+|+++++++++++++..... .+++......+.+..+++.+. .+..+..+++
T Consensus 193 d~~~~s~~K~l~~~~--~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 270 (361)
T cd06452 193 DFIVGSGHKSMAASA--PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKA 270 (361)
T ss_pred CEEEecCCccccCCC--CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998654 578999999998887654422 222222222333334443332 3334445667
Q ss_pred HHHHHHHHhCCCce
Q 009523 409 LRMAKILEAHPKVK 422 (532)
Q Consensus 409 ~~la~~L~~~p~v~ 422 (532)
+++.+.|+++++++
T Consensus 271 ~~l~~~L~~l~g~~ 284 (361)
T cd06452 271 RWFVAELEKIEGIK 284 (361)
T ss_pred HHHHHHHhcCCCeE
Confidence 88899999887764
No 62
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=4.1e-24 Score=226.00 Aligned_cols=225 Identities=13% Similarity=0.184 Sum_probs=177.4
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.|.+++...|..+++|+.+|+++|.++++++++|++++..++.+++++||+|+++.+.|.+.+.. ++..|+++.++
T Consensus 54 ~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~----~~~~G~~~~~v 129 (387)
T PRK09331 54 PGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVA----AERAGLNVREV 129 (387)
T ss_pred ccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEE
Confidence 45666777889999999999999999999999999999999999999999999999999886532 45568888888
Q ss_pred CC-------CCHHHHHHhhcCC------CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-ccccccc
Q 009523 272 DP-------ADMEGLEAALNNN------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSL 337 (532)
Q Consensus 272 d~-------~dle~Le~al~~~------~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~ 337 (532)
+. .|++++++++++. ++++|++++|+|++|.+.|+++|.++|+++|+++++|++++.+. +.+...+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~ 209 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL 209 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc
Confidence 75 3789999988642 58999999999999999999999999999999999999988653 4555677
Q ss_pred CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--------hcCCCccHHHHHHHHHhHHH---HHHHHHHHHH
Q 009523 338 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGALNPNAAYLIIRGMKT---LHLRVQQQNS 406 (532)
Q Consensus 338 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--------~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~ 406 (532)
|+|+++.|+||++++++ .+|++++++++++.++.... .+|..+.+...+.++.+++. ...+++++.+
T Consensus 210 g~D~~~~s~~K~l~~~~--~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~ 287 (387)
T PRK09331 210 GADFIVGSGHKSMAASA--PSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVK 287 (387)
T ss_pred CCCEEEeeCcccccCCC--CEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998664 47899999988887655322 12333332223333333332 2345566678
Q ss_pred HHHHHHHHHHhCCCce
Q 009523 407 TALRMAKILEAHPKVK 422 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~ 422 (532)
+++++.+.|.+.+++.
T Consensus 288 ~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 288 KARWFVDELEKIEGFK 303 (387)
T ss_pred HHHHHHHHHhcCCCEE
Confidence 8889999999887764
No 63
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=4e-24 Score=224.77 Aligned_cols=282 Identities=15% Similarity=0.168 Sum_probs=198.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~----- 274 (532)
+|....+++.+|+++|.+.++++++|++++..++.+++++||+|+++.+.|.+.+. .++..|+++..++.+
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccC
Confidence 45788899999999999999999999999999999999999999999999877552 346678888888754
Q ss_pred --CHHHHHHhhcC------CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEEC
Q 009523 275 --DMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 345 (532)
Q Consensus 275 --dle~Le~al~~------~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S 345 (532)
|+++|++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .......++|+++.|
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s 205 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGS 205 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEee
Confidence 89999998853 258999999999999999999999999999999999999988753 334445678999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhhhc--------CCCccHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHH
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--------GGALNPNAAYLIIRGMKTLHL---RVQQQNSTALRMAKI 414 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~--------G~~~~~~~a~l~l~~l~tl~~---r~~~~~~~a~~la~~ 414 (532)
+||++++++ ..|++++++++++.++.....+ +.......+..+...++.... ++.+..++++++.+.
T Consensus 206 ~sK~~~~~g--~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 206 GHKSMAASG--PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred CcccccCCC--CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998654 3689999999998887654321 111111122222333433222 233445666788888
Q ss_pred HHhCCCceEE-eCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCcee-ecCCCccccccc
Q 009523 415 LEAHPKVKRV-HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYIA-PSFGGCESIVDQ 485 (532)
Q Consensus 415 L~~~p~v~~V-~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------~~~~~~~l~~L~~~~i~-vs~G~~~sl~~~ 485 (532)
|++.+ +..+ .+|. ..+++.+.+++. ......+.+.|...++. +..
T Consensus 284 L~~~g-~~~~~~~~s----------------~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~--------- 337 (370)
T TIGR02539 284 LEDIG-FIQLGQKPK----------------EHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRS--------- 337 (370)
T ss_pred HHhCC-cEEEccCCC----------------cCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccC---------
Confidence 88763 3221 1121 256777776531 11234566666655542 111
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEe--c-CCCHHHHHHHHHHHHhh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSF--G-VEDFEDLKADVLQALHA 531 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSv--G-~ed~~dli~dL~~AL~~ 531 (532)
| .+++||+|+ + .|+.+.+++.|++.+++
T Consensus 338 -----------------~-~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 338 -----------------G-QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred -----------------C-cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 1 146899997 3 24556666666666543
No 64
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=6.9e-24 Score=221.35 Aligned_cols=283 Identities=14% Similarity=0.196 Sum_probs=196.1
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.+|+++....||+++|++++.+ +.|++++|+ +++..++.+++++||+|++++|+|.... ..++..|.++..++
T Consensus 53 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~ 128 (351)
T PRK14807 53 VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPVK 128 (351)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEee
Confidence 46677777889999999999863 455565665 8899999999999999999999997533 34455677777765
Q ss_pred C-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccc---c-ccCCcEEE
Q 009523 273 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVL 343 (532)
Q Consensus 273 ~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~---l-~~gaDivv 343 (532)
. .|++++++++++.++++|++++|+||||.+.+.+++.+++++++.++|+|++|........ . .....+++
T Consensus 129 ~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~ 208 (351)
T PRK14807 129 LKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVL 208 (351)
T ss_pred cCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEE
Confidence 3 3689999998754799999999999999999999999999998889999999864321111 1 12346899
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--TLHLRVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~--tl~~r~~~~~~~a~~la~~L~~~p~v 421 (532)
.|+||.+|.+| ++.||+++++++++.++..... ...+.....++...++ .+..+++...++++.+.+.|++.+++
T Consensus 209 ~S~SK~~~~~G-lRiG~~v~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 209 RTLSKAFGLAG-LRVGYAVANENILKYLNLVKSP--YNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred ecchHhcccch-hceeeeecCHHHHHHHHHccCC--CCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999998555 5689999999999988765432 2234454444444443 23444455556677778888766654
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHh
Q 009523 422 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 501 (532)
Q Consensus 422 ~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~ 501 (532)
. + +|. .|+++++.++. ...+.+.|...++.+..++..
T Consensus 286 ~-~-~~~----------------~~~~~~i~~~~----~~~~~~~l~~~gV~v~~~~~~--------------------- 322 (351)
T PRK14807 286 K-V-YPS----------------KTNFILVKFKD----ADYVYQGLLERGILVRDFSKV--------------------- 322 (351)
T ss_pred E-E-CcC----------------CccEEEEEcCC----HHHHHHHHHHCCEEEEECCCC---------------------
Confidence 2 2 221 35678888863 234444444446655432110
Q ss_pred cCCCCCeEEEEecCC-CHHHHHHHHHHH
Q 009523 502 YGIMDNLVRFSFGVE-DFEDLKADVLQA 528 (532)
Q Consensus 502 ~gi~~~~IRlSvG~e-d~~dli~dL~~A 528 (532)
.+ .++++||+++.. +.+.+++.|++.
T Consensus 323 ~~-~~~~iRis~~~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 323 EG-LEGALRITVSSCEANDYLINGLKEL 349 (351)
T ss_pred CC-CCCeEEEEcCCHHHHHHHHHHHHHh
Confidence 01 246899999963 345556665553
No 65
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=8e-24 Score=222.14 Aligned_cols=301 Identities=19% Similarity=0.233 Sum_probs=209.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
+..+++++.+++++|.+ +++++++|++++..++.+++++||+|+++.+.|+++...+....+..|++++.++.+
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 66788999999999974 356667778999999999999999999999999887766655666678888887642
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCccccC
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK~lg 351 (532)
|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. ..+....|+|+++.|++|+++
T Consensus 124 ~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 124 LISPERIKRAIKT-NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 79999999977 79999999999999999999999999999999999999987553 344445789999999999988
Q ss_pred CCCCcEEEEEEeChHHHHHHHHH----------------hhhcCCCccHHHHHHHHHhHHHH-----HHHHHHHHHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQIRNL----------------HHVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALR 410 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~~~----------------~~~~G~~~~~~~a~l~l~~l~tl-----~~r~~~~~~~a~~ 410 (532)
++.+ .|++++.++..+..+... .+...++.+....+.+..+++.+ ....++..+.+++
T Consensus 203 ~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 203 GPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 7643 244555544322211110 00011223333333333344433 2234555677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCcccccccCccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~~~sl~~~pa~~ 489 (532)
+.+.|++.+++. +..|.-+. ..+++++|.+++ .....+.+.|... ++.++.|..++...+
T Consensus 282 ~~~~l~~~~~~~-~~~~~~~~------------~~~~~v~~~~~~--~~~~~~~~~L~~~~gi~v~~g~~~~~~~~---- 342 (376)
T TIGR01977 282 LLNGLREINKVK-IYGPADPA------------NRVGVVSFTVEG--IDSEEVADILDEKFDIATRTGLHCAPLAH---- 342 (376)
T ss_pred HHHHHhcCCCeE-EeCCCCcc------------ccCCeEEEEECC--CCHHHHHHHHhccCCEEEEcccccchHHH----
Confidence 888888777653 33221110 125689999875 2345566666554 778877755432211
Q ss_pred cccCCCHHHHHhcC-CCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 490 SYWDLSQSERLKYG-IMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 490 s~~~~~~~~~~~~g-i~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
..+| ..++.||+|++..++++.++.+.++|+.+
T Consensus 343 ----------~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~~ 376 (376)
T TIGR01977 343 ----------KTIGTFATGTIRLSLGYFNTEEEIEKLLEALSEI 376 (376)
T ss_pred ----------HHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhhC
Confidence 1122 24579999999999999999999888753
No 66
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=4.3e-24 Score=225.22 Aligned_cols=305 Identities=17% Similarity=0.181 Sum_probs=201.1
Q ss_pred CCchhHHHHHHH---HHhhhCC---CcEEEeCCHHHHHHHHHHHhc-----cC-CCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 198 YGNPTTVVVEEK---MSALEGA---ESTVIMASGMSASTVMLLALV-----PA-GGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 198 ~~~p~~~~Le~~---lA~l~ga---~~~i~~sSG~~Ai~~al~all-----~~-Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
|+.+....+++. +++..++ ++.++++++++++..++.++. ++ ||+|+++...|++....+ ..++..|
T Consensus 36 ~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~-~~~~~~G 114 (382)
T TIGR03403 36 FGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATC-AFLESLG 114 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHH-HHHHHCC
Confidence 333444445544 4444553 345566666799999888762 45 478999999998876654 3456789
Q ss_pred cEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCC
Q 009523 266 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGA 339 (532)
Q Consensus 266 v~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~ga 339 (532)
+++..++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ .+.+..++|+
T Consensus 115 ~~v~~v~~~~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~ 193 (382)
T TIGR03403 115 VEVTYLPINEQGTITAEQVREAITE-KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGV 193 (382)
T ss_pred CEEEEEecCCCCCCCHHHHHHhccc-CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCC
Confidence 999888653 78999999987 6999999999999999999999999999999999999997754 4456667899
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHH-HH-HHH---HhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLV-TQ-IRN---LHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 410 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li-~~-l~~---~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~ 410 (532)
|+++.|+||++|++| .|+++.+++.. .. +.. ......++++....+.+..+++. +....++..+.+++
T Consensus 194 D~~~~s~~K~~gp~G---~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~ 270 (382)
T TIGR03403 194 DFLSFSAHKFHGPKG---VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDR 270 (382)
T ss_pred CEEEEcchhhCCCCc---eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999988776 46665544321 01 100 00011233444433333334432 23333445566677
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.|.+.+++. +..|. . ...++++.|.+++ .....++..|...+|.++.|..++..
T Consensus 271 l~~~L~~~~~~~-~~~~~--~-----------~~~~~~~~~~~~~--~~~~~~~~~L~~~gI~v~~g~~c~~~------- 327 (382)
T TIGR03403 271 LEDALLELPDVF-VVGDR--E-----------HRVPNTILISIKG--VEGEAMLWDLNKAGIAASTGSACASE------- 327 (382)
T ss_pred HHHHHhcCCCEE-EECCC--C-----------CCcCCEEEEEeCC--CCHHHHHHhhccCCEEEEchhccCCC-------
Confidence 777777777664 32221 0 0134577888875 22345566677779999988654311
Q ss_pred ccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 491 YWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~----~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..-+...+..+|.. .+.||+|++..++++.++.+.++|++
T Consensus 328 -~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 328 -DLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred -CCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 11123445566653 47899999998877777777777753
No 67
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.8e-24 Score=223.75 Aligned_cols=287 Identities=18% Similarity=0.253 Sum_probs=214.6
Q ss_pred CCCCCCchhHHHHHHHHHhhhC-CC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 194 EYGRYGNPTTVVVEEKMSALEG-AE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 194 ~Y~R~~~p~~~~Le~~lA~l~g-a~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
.+.||+++...+|++++++++| .+ +.|+.+.|+ +.|..++++++.+||.|++..|+|... ...++..|.++..
T Consensus 50 ~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y----~~~a~~~g~~~~~ 125 (356)
T COG0079 50 KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMY----EIAAQLAGAEVVK 125 (356)
T ss_pred hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHH----HHHHHhcCCeEEE
Confidence 5789999999999999999999 43 577777887 999999999999999999999999753 3456677988888
Q ss_pred eCC----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCcccccc----cCCc
Q 009523 271 IDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALS----LGAD 340 (532)
Q Consensus 271 vd~----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~~~~l~----~gaD 340 (532)
++. .|++.+.+++++ ++++||+++||||||...+.++|.+++... +.+||+||+|..+....... ...-
T Consensus 126 v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nl 204 (356)
T COG0079 126 VPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNL 204 (356)
T ss_pred ecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCE
Confidence 876 578899998887 799999999999999999988888887754 88999999987765422222 2234
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l---~~l~tl~~r~~~~~~~a~~la~~L~~ 417 (532)
+++.||||.||-.| ++.|+.++++++++.+++.+..+.. +.....++. +.-+.+....++..+.++++.+.|++
T Consensus 205 ivlRTfSKa~gLAG-lRlGy~ia~~~~i~~l~~vr~p~~v--~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~ 281 (356)
T COG0079 205 IVLRTFSKAFGLAG-LRVGYAIANPELIAALNKVRPPFNV--SSPALAAAIAALRDADYLEESVERIREERERLYAALKA 281 (356)
T ss_pred EEEEecHHhhhcch-hceeeccCCHHHHHHHHHhcCCCCC--CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999776 5688999999999999998876653 333333332 33345666677777888999999998
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
++ +..| +|. .++++.+.++. .. ...+.+.|...|+-+..-+.
T Consensus 282 ~~-~~~v-~pS----------------~aNFvlv~~~~-~~-~~~l~~~L~~~giivR~~~~------------------ 323 (356)
T COG0079 282 LG-LFGV-FPS----------------QANFVLVRVPD-AE-AAALAEALLKKGILVRDCSS------------------ 323 (356)
T ss_pred CC-CCee-cCC----------------CCcEEEEECCC-cc-HHHHHHHHHHCCEEEEeCCC------------------
Confidence 76 4333 333 36788888864 23 44566666555655442110
Q ss_pred HHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009523 498 ERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 530 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~AL~ 530 (532)
.+..++++|+|+|.+ +-+.+++.|.+.+.
T Consensus 324 ----~~~~~~~lRitvgt~een~~ll~AL~~~~~ 353 (356)
T COG0079 324 ----VGLLPGYLRITVGTPEENDRLLAALREVLK 353 (356)
T ss_pred ----CCCCCCeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 123468999999974 34666777666654
No 68
>PLN02721 threonine aldolase
Probab=99.93 E-value=6.5e-24 Score=220.65 Aligned_cols=285 Identities=19% Similarity=0.211 Sum_probs=199.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~-~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
+.+|...+||++||+++|.+..+++++|++++..++.++++ +||+|++++++|...+... ..+...|+++..++.
T Consensus 37 ~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 115 (353)
T PLN02721 37 GYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNED 115 (353)
T ss_pred CCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcC
Confidence 44677899999999999998889999999888888888777 9999999999986544210 134556888887763
Q ss_pred --CCHHHHHHhhcC------CCeeEEEEeCC-CCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCC------Cccccc
Q 009523 274 --ADMEGLEAALNN------NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 335 (532)
Q Consensus 274 --~dle~Le~al~~------~~tklV~lesP-~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~------~~~~~l 335 (532)
.|++++++++++ .++++|+++++ +||+|.+.| +++|.++|+++|+++|+|+++... ......
T Consensus 116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRL 195 (353)
T ss_pred CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHH
Confidence 379999999972 16899999885 678999987 679999999999999999985422 111222
Q ss_pred ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccH--HHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 009523 336 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMAK 413 (532)
Q Consensus 336 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~--~~a~l~l~~l~tl~~r~~~~~~~a~~la~ 413 (532)
..++|.++.|+||+++++ .||++++++++++.+.......++.+.. ..++....+++....++++..++++.+.+
T Consensus 196 ~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 272 (353)
T PLN02721 196 VKAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAE 272 (353)
T ss_pred hhhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347899999999999865 3556778889888877665544443322 22333444566655566666677888899
Q ss_pred HHHhCCCceE-EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccccccCccccc
Q 009523 414 ILEAHPKVKR-VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 414 ~L~~~p~v~~-V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
.|++.+++.. +..| .++++++.++.. ......+.+.|...++.+..+
T Consensus 273 ~L~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~-------------- 321 (353)
T PLN02721 273 GLNQIKGLRVNVAAV-----------------ETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG-------------- 321 (353)
T ss_pred HHHhCCCcEEecCCc-----------------cceEEEEEccCCccccHHHHHHHHHhCCcEEecC--------------
Confidence 9988766532 2111 256888888632 123456666776556555433
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009523 492 WDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALH 530 (532)
Q Consensus 492 ~~~~~~~~~~~gi~~~~IRlSvG~ed~----~dli~dL~~AL~ 530 (532)
..+.||++++.... +++++.|++++.
T Consensus 322 -------------~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 322 -------------NSSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred -------------CCceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 14589999985444 444455554443
No 69
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=9.2e-24 Score=224.71 Aligned_cols=283 Identities=16% Similarity=0.170 Sum_probs=201.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
+.+...+||++||+++|.+.+++++||++|+..+++++..+||+|+++...|.+.... +...|+++..++..|+++
T Consensus 97 ~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~ 172 (407)
T PRK07179 97 DDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHNDVDH 172 (407)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCCCHHH
Confidence 3468899999999999999999999999999999999999999999999888775432 344577887777789999
Q ss_pred HHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-------ccccc--cCCcEEEECCccc
Q 009523 279 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALS--LGADLVLHSATKF 349 (532)
Q Consensus 279 Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-------~~~l~--~gaDivv~S~sK~ 349 (532)
|+++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ..... .++|+++.|++|.
T Consensus 173 l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~ 252 (407)
T PRK07179 173 LRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKA 252 (407)
T ss_pred HHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHh
Confidence 99999763589999999999999999999999999999999999999864321 11111 2469999999999
Q ss_pred cCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009523 350 IGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRV 424 (532)
Q Consensus 350 lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v~~V 424 (532)
+++. +|++++++++++.++.... .++++..+..+..+...++ ....+.++..++.+++.+.|++. ++. +
T Consensus 253 ~g~~----~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v 326 (407)
T PRK07179 253 FAGR----AGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYN-I 326 (407)
T ss_pred hhcc----CeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-C
Confidence 9864 6889999888777764332 2455555554443333333 33345566777888888888764 221 1
Q ss_pred eCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCC
Q 009523 425 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGI 504 (532)
Q Consensus 425 ~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi 504 (532)
. +.+++++++++. ......+.+.|...++.++ ..+.|.. ..
T Consensus 327 ~------------------~~~~i~~l~~~~-~~~~~~~~~~L~~~GI~~~------~~~~p~~--------------~~ 367 (407)
T PRK07179 327 R------------------SESQIIALETGS-ERNTEVLRDALEERNVFGA------VFCAPAT--------------PK 367 (407)
T ss_pred C------------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCceEe------eecCCCC--------------CC
Confidence 1 135688888753 2344556666655554322 1122321 01
Q ss_pred CCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 505 MDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 505 ~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..+.||||++...+++.++.+.++|+
T Consensus 368 ~~~~lRis~~~~~t~edi~~~~~~l~ 393 (407)
T PRK07179 368 NRNLIRLSLNADLTASDLDRVLEVCR 393 (407)
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHH
Confidence 25789999998665555555555543
No 70
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.4e-24 Score=224.85 Aligned_cols=269 Identities=14% Similarity=0.109 Sum_probs=185.9
Q ss_pred hhHHHHHHHHHhhhC------C-C-cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 201 PTTVVVEEKMSALEG------A-E-STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 201 p~~~~Le~~lA~l~g------a-~-~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+....|+++||++++ . . +.|++++| ++++..++.+++++||+|++++|+|+... ..++..|+++..+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v 144 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYE----TGIQMAGATSYYM 144 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchH----HHHHhcCCEEEEE
Confidence 456678888887763 1 2 45555555 59999999999999999999999998754 3455678888777
Q ss_pred CCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----ccc-
Q 009523 272 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL- 335 (532)
Q Consensus 272 d~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-----~~l- 335 (532)
+.+ |++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ...
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~ 223 (399)
T PRK07681 145 PLKKENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLS 223 (399)
T ss_pred ecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhh
Confidence 532 68889888876 6999999999999999998 667888899999999999998643211 111
Q ss_pred ---ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHH
Q 009523 336 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTA 408 (532)
Q Consensus 336 ---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a 408 (532)
.....+++.|+||.+|.+| ++.||+++++++++.+...........+......+...++. +....+...++.
T Consensus 224 ~~~~~~~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK07681 224 VPGAKEVGVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERR 302 (399)
T ss_pred CCCCcccEEEEeecccccCCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1124588999999998665 56899999999999888766544444555544444444432 333334445666
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccccccCc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~G~~~sl~~~pa 487 (532)
+.+.+.|+++ ++ .+..|. .|.++|+.++.+ .....|.+.+.. .++.+..|..+..
T Consensus 303 ~~l~~~L~~~-g~-~~~~p~----------------~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~----- 358 (399)
T PRK07681 303 DTLVDGFRTF-GW-NVDKPA----------------GSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGP----- 358 (399)
T ss_pred HHHHHHHHHC-CC-cccCCC----------------eeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCc-----
Confidence 7777888775 33 222221 467889998743 223445555433 5777777644310
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
-.++++||+++.
T Consensus 359 ----------------~~~~~iRis~~~ 370 (399)
T PRK07681 359 ----------------HGEGFVRIALVQ 370 (399)
T ss_pred ----------------CCCCeEEEEecC
Confidence 024799999995
No 71
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=3.2e-24 Score=224.89 Aligned_cols=299 Identities=17% Similarity=0.187 Sum_probs=204.9
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al----l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
+++......+++++++++++|++ +.+++++|++++++++..+ .++||+|+++...|+++...+.. +...|+++
T Consensus 37 ~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~~v 115 (364)
T PLN02651 37 YGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGFEV 115 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCCEE
Confidence 34444566888999999999974 4566667779988777654 47899999999999887655543 34678888
Q ss_pred EEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEE
Q 009523 269 TVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLV 342 (532)
Q Consensus 269 ~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDiv 342 (532)
+.++. .|++++++++++ ++++|++++++|+||.+.|+++|.++||++|+++++|++++.+ .+++..++|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~ 194 (364)
T PLN02651 116 TYLPVKSDGLVDLDELAAAIRP-DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLM 194 (364)
T ss_pred EEEccCCCCcCCHHHHHHhcCC-CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEE
Confidence 88764 278999999987 6999999999999999999999999999999999999998765 4566777899999
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHh-------hhcCCCccHHHHHHHHHhHHHHHHHH----HHHHHHHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTLHLRV----QQQNSTALRM 411 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~~~~~~a~l~l~~l~tl~~r~----~~~~~~a~~l 411 (532)
+.|.||++|++| .|+++.+++....+.... ....++.+....+.+..+++.+...+ ++..+..+++
T Consensus 195 ~~s~hK~~gp~G---~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l 271 (364)
T PLN02651 195 SISGHKIYGPKG---VGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERL 271 (364)
T ss_pred EechhhhCCCCc---eEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999876665 677776665444332211 11223444444444444554433222 3334455566
Q ss_pred HHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 412 AKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 412 a~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
.+.|++ .|+++ +..|.-+ . ....++++|.+++ .....+...|.. |.++.|..++.. ..
T Consensus 272 ~~~l~~~~~~~~-i~~~~~~---~--------~~~~~i~~~~~~~--~~~~~~~~~L~~--i~v~~g~~c~~~----~~- 330 (364)
T PLN02651 272 LNGLRAKLGGVR-VNGPRDP---E--------KRYPGTLNLSFAY--VEGESLLMGLKE--VAVSSGSACTSA----SL- 330 (364)
T ss_pred HHHHHhhCCCEE-EECCCCc---c--------cCcCCEEEEEeCC--CCHHHHHHHhCC--EEEEchhhcCCC----CC-
Confidence 666654 45653 3333211 0 1135799999975 234456666654 889988764321 11
Q ss_pred ccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHH
Q 009523 491 YWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLK 522 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~----~~~IRlSvG~ed~~dli 522 (532)
.+.....++|+. .+.||+|++..++++.|
T Consensus 331 ---~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~di 363 (364)
T PLN02651 331 ---EPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEV 363 (364)
T ss_pred ---CcCHHHHHcCCChHHhCceEEEEcCCCCCHHHc
Confidence 122344566654 47999999999887654
No 72
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=221.43 Aligned_cols=294 Identities=16% Similarity=0.214 Sum_probs=197.3
Q ss_pred CCCCCch-hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNP-TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p-~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+..|+.+ ...+|++++|+++|. ++++++++|++|+..++.+++.+||+|++++|.|.... ..++..|.++..+
T Consensus 59 ~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v 134 (380)
T PRK06225 59 YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEV 134 (380)
T ss_pred CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEee
Confidence 3445554 368899999999986 35777778889999999999999999999999998643 3445667777766
Q ss_pred CC--------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccccc
Q 009523 272 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS 336 (532)
Q Consensus 272 d~--------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~ 336 (532)
+. .|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..... .....
T Consensus 135 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 213 (380)
T PRK06225 135 PIYSEECNYKLTPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYA 213 (380)
T ss_pred ccccccCCccCCHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcC
Confidence 52 378899999887 6999999999999999986 77889999999999999999642111 01112
Q ss_pred cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHH-HHHHHHHHH
Q 009523 337 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQ-QNSTALRMA 412 (532)
Q Consensus 337 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~-~~~~a~~la 412 (532)
....+++.|+||++|.+| ...|++++++++++.++..... ....+...+..+...+.. +..++.+ ..++...+.
T Consensus 214 ~~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~ 291 (380)
T PRK06225 214 PEHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKSIVIN-DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIK 291 (380)
T ss_pred CCCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 234688899999997565 5689999999998888765421 122344443333333322 2222222 234455566
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccccc
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 492 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~ 492 (532)
+.|++.+++....+|. .|+++++.++........|.+.|...++.+..|..++ +
T Consensus 292 ~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~----~------ 345 (380)
T PRK06225 292 EAVDEIEGVFLPVYPS----------------HGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS----K------ 345 (380)
T ss_pred HHHHhCcCCccccCCC----------------CCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC----c------
Confidence 7777655432111221 3678899886421234556666655677776663321 0
Q ss_pred CCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhh
Q 009523 493 DLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHA 531 (532)
Q Consensus 493 ~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~~ 531 (532)
...++++|+|++. |+.+++++.|.+++++
T Consensus 346 ----------~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 346 ----------RFGDRYIRVSFSIPREQVEVFCEEFPDVVET 376 (380)
T ss_pred ----------CCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 0125799999997 3456667777776654
No 73
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=6.6e-24 Score=223.93 Aligned_cols=281 Identities=14% Similarity=0.160 Sum_probs=194.5
Q ss_pred CCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+++...+|+++||+++|.+ +.|++++|+ +++..++.+++++||+|++++|.|+... ..++..|+++..++.
T Consensus 81 ~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~ 156 (380)
T PLN03026 81 YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPR 156 (380)
T ss_pred ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeec
Confidence 4577788889999999999863 455566665 8999999999999999999999996432 344557888877754
Q ss_pred -----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc----ccc-ccCCcEEE
Q 009523 274 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SLGADLVL 343 (532)
Q Consensus 274 -----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~----~~l-~~gaDivv 343 (532)
.|+++|+++++..++++|++++|+||||.+.+.+++.++++.. +++|+||+|...... ... .....+++
T Consensus 157 ~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~ 235 (380)
T PLN03026 157 TPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVL 235 (380)
T ss_pred CCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEE
Confidence 2688999988333799999999999999999999999999865 899999997643211 111 22456899
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
.|+||.+|..| .+.|++++++++++.+......++ .+.....++...++ .+....+...+++..+.+.|++++.
T Consensus 236 ~SfSK~~glaG-lRiGy~~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 312 (380)
T PLN03026 236 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPF 312 (380)
T ss_pred ecchHhhcCcc-ccceeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999998665 568999999999998877654332 44444444444442 2333334445667778888887654
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+. + +|. .|+++++.++.+ .....|.+.|...++.+..+.. +
T Consensus 313 ~~-~-~p~----------------~~~f~~~~~~~~-~~~~~~~~~l~~~gI~v~~~~~------~-------------- 353 (380)
T PLN03026 313 LE-P-YPS----------------DANFILCRVTSG-RDAKKLKEDLAKMGVMVRHYNS------K-------------- 353 (380)
T ss_pred Ce-E-CCC----------------CCeEEEEECCCC-CCHHHHHHHHHHCCeEEEECCC------C--------------
Confidence 32 2 332 467889988642 2234555565555666654321 0
Q ss_pred hcCCCCCeEEEEecCC-CHHHHHHHHH
Q 009523 501 KYGIMDNLVRFSFGVE-DFEDLKADVL 526 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~e-d~~dli~dL~ 526 (532)
+ .++++|||+|.. +.+.+++.|+
T Consensus 354 --~-~~~~lRis~~~~~~~~~l~~al~ 377 (380)
T PLN03026 354 --E-LKGYIRVSVGKPEHTDALMEALK 377 (380)
T ss_pred --C-CCCEEEEecCCHHHHHHHHHHHH
Confidence 1 256999999953 2344444443
No 74
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=6.7e-24 Score=223.38 Aligned_cols=300 Identities=17% Similarity=0.159 Sum_probs=203.9
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 200 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all---~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
....+++++.+++++|++ +++++++|++++++++..++ ++||+|+++..+|++....+. .++..|++++.++.
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~ 119 (379)
T TIGR03402 41 GKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQ-HLEKQGYKVTYLPVD 119 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHH-HHHHcCCEEEEEccC
Confidence 345778889999999974 46677778899999888764 467899999999988765553 34557999888864
Q ss_pred ----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCcc
Q 009523 274 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 348 (532)
Q Consensus 274 ----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK 348 (532)
.|++++++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+ .+.+....++|+++.|.+|
T Consensus 120 ~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K 198 (379)
T TIGR03402 120 EEGRLDLEELRAAITD-DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK 198 (379)
T ss_pred CCCcCCHHHHHHhcCC-CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHH
Confidence 378999999987 6999999999999999999999999999999999999998765 3345556799999999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHh-------hhcCCCccHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHHHh
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTLHLRV----QQQNSTALRMAKILEA 417 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~~~~~~a~l~l~~l~tl~~r~----~~~~~~a~~la~~L~~ 417 (532)
++|++| .|+++.+++.. +.... ....++.+....+.+..+++.+...+ ++..+..+++.+.|.+
T Consensus 199 ~~gp~G---~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 199 LHGPKG---VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred cCCCCc---eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 777666 67776665431 11100 01123333333333333443332223 3444555666666664
Q ss_pred -CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCH
Q 009523 418 -HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 496 (532)
Q Consensus 418 -~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~ 496 (532)
.+.+... .+. . ...+++++|.+++. ....+...|+..+|.++.|..++... ..+.
T Consensus 274 ~~~~~~~~-~~~--~-----------~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~--------~~~~ 329 (379)
T TIGR03402 274 RIPDARLN-GDP--T-----------KRLPNTVNISFEYI--EGEAILLLLDMEGICASSGSACTSGS--------LEPS 329 (379)
T ss_pred hCCCEEEe-CCC--c-----------cCCCCEEEEEecCC--CHHHHHHhhccCCEEEEchhhcCCCC--------CCcC
Confidence 5655322 111 0 01245777777642 24567777877899999886643211 1123
Q ss_pred HHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 497 SERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 497 ~~~~~~gi~----~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..+..+|.. .+.||+|++..++++.|+.+.++|+
T Consensus 330 ~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~ 367 (379)
T TIGR03402 330 HVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLP 367 (379)
T ss_pred HHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 445566654 4789999999877777777766665
No 75
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=5.8e-24 Score=224.01 Aligned_cols=311 Identities=17% Similarity=0.199 Sum_probs=207.7
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC-CcEEEe-CCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA-ESTVIM-ASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga-~~~i~~-sSG~~Ai~~al~all----~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
|..++......+.+|+.+|+++|+ ++.|++ +++++++..++.+++ ++||+|+++...|++....+ ..++..|+
T Consensus 35 ~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~-~~~~~~g~ 113 (381)
T PRK02948 35 HDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYF-QSLESQGY 113 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHH-HHHHhCCC
Confidence 333444445678899999999986 345555 455799988887775 57899999999998876655 34566788
Q ss_pred EEEEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCc
Q 009523 267 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGAD 340 (532)
Q Consensus 267 ~v~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaD 340 (532)
++..++. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|+++..+ ...+..++++|
T Consensus 114 ~v~~v~~~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d 192 (381)
T PRK02948 114 TVTEIPVDKSGLIRLVDLERAITP-DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGID 192 (381)
T ss_pred EEEEEeeCCCCCCCHHHHHHhcCC-CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCC
Confidence 8887763 378999999987 6999999999999999999999999999999999999886543 33444567899
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHH-HHHHHH----HhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHH
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRM 411 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~----~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a~~l 411 (532)
+++.|+||++|++| .|+++.++++ +..+.. ......++.+......+..+++ .+....++..++++++
T Consensus 193 ~~~~s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 269 (381)
T PRK02948 193 SLSVSAHKIYGPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYF 269 (381)
T ss_pred EEEecHHhcCCCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998776 5777666553 111110 0011123344444333333333 3344455666777788
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
.+.|++.+ +. +...+ ++.+ ..+.+++|.+++- ....+...|...+|.++.|..++....
T Consensus 270 ~~~L~~~~-~~-v~~~~---~~~~--------~~~~i~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~~------ 328 (381)
T PRK02948 270 LEQIQTLP-LP-IEVEG---HSTS--------CLPHIIGVTIKGI--EGQYTMLECNRRGIAISTGSACQVGKQ------ 328 (381)
T ss_pred HHHHhcCC-CC-EEEeC---CCcc--------CcCCEEEEEeCCC--CHHHHHHhcccCCEEEEchHhcCCCCC------
Confidence 88887763 21 21111 0111 1356788888751 235556667777899988765432111
Q ss_pred cCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 492 WDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 492 ~~~~~~~~~~~gi~----~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
-+...+.++|.+ ++.||+|++..++++.++.+.++|++
T Consensus 329 --~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 329 --EPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred --CCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 122334445532 47999999988777777777777653
No 76
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=223.89 Aligned_cols=286 Identities=15% Similarity=0.150 Sum_probs=194.6
Q ss_pred CCCchhHHHHHHHHHhhh----C---C--CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 197 RYGNPTTVVVEEKMSALE----G---A--ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~----g---a--~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
+|+......|++++|+++ | . ++.|++++|+ +++..++.+++++||+|+++.|.|..... .++..|.
T Consensus 77 ~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~ 152 (410)
T PRK06290 77 GYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT----HTKYYGG 152 (410)
T ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH----HHHHcCC
Confidence 344456778888888875 3 2 2356676776 99999999999999999999999987543 4455688
Q ss_pred EEEEeCCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-c--
Q 009523 267 TATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K-- 333 (532)
Q Consensus 267 ~v~~vd~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-~-- 333 (532)
++..++.+ |++++++++.+ ++++|++++|+||||.+++ +++|.++|+++|++||+||+|...... .
T Consensus 153 ~v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~ 231 (410)
T PRK06290 153 EVYNLPLLEENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPL 231 (410)
T ss_pred EEEEEecCCCcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCc
Confidence 87777532 68888888876 6999999999999999998 567888899999999999997653211 1
Q ss_pred c---c--ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHH
Q 009523 334 A---L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQN 405 (532)
Q Consensus 334 ~---l--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~ 405 (532)
+ + ..+.+|++.|+||.+|.+| .+.|++++++++++.+...........+.....++...++ .+....++..
T Consensus 232 s~~~~~~~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 310 (410)
T PRK06290 232 SFLSVPGAKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYS 310 (410)
T ss_pred ChhcCCCccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 1 1 1235699999999998665 5689999999999888776554443333333333334443 2333344455
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH------HHHHHHHHHcCCCc-eeecCCC
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDALKIPY-IAPSFGG 478 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~------~~~~~~l~~L~~~~-i~vs~G~ 478 (532)
+++..+.+.|+++ ++. +..|. .|.++|+.++++. .....|.+.|...+ +.+..|+
T Consensus 311 ~~~~~l~~~L~~~-g~~-~~~p~----------------g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~ 372 (410)
T PRK06290 311 RRLDKLVKILNEV-GFK-AEMPG----------------GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWD 372 (410)
T ss_pred HHHHHHHHHHHhC-CCe-ecCCC----------------eeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCc
Confidence 6777788888875 332 22121 2446678886421 13445555554332 2222221
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEec-----CCCHHHHHHHHHHHHhh
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG-----VEDFEDLKADVLQALHA 531 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG-----~ed~~dli~dL~~AL~~ 531 (532)
. .++++||+++ .|+.+.+++.|.++|..
T Consensus 373 ~-------------------------~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 373 D-------------------------AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred c-------------------------ccCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 1 1368999997 35677888999988875
No 77
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.93 E-value=2.6e-23 Score=219.82 Aligned_cols=284 Identities=18% Similarity=0.161 Sum_probs=195.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+...+||+++|+++|.+++++++||++|+..++.+++++||+|+++++.|++....+ ..+ +.....+...|+++|
T Consensus 82 ~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~-~~~---~~~~~~~~~~d~~~l 157 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGV-RLC---KAKRYRYANNDMADL 157 (393)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH-Hhc---CCceEEeCCCCHHHH
Confidence 5678999999999999999999999999999999999999999999999999866544 222 333334456789999
Q ss_pred HHhhcC---C--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-cc------cc--ccCCcEEEEC
Q 009523 280 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QK------AL--SLGADLVLHS 345 (532)
Q Consensus 280 e~al~~---~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~------~l--~~gaDivv~S 345 (532)
++++++ . ++++|++++++||+|.+.|+++|+++|++||+++|+|++++.++. .. .. ..++|+++.|
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s 237 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGT 237 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEE
Confidence 988874 1 589999999999999999999999999999999999999864321 10 11 2257999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+||+++|. .+|++++++++++.++.... .++++.++.....+...++.+ ....++..++.+++.+.|++. +
T Consensus 238 ~sK~l~g~---r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 313 (393)
T TIGR01822 238 LGKALGGA---SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-G 313 (393)
T ss_pred ChHHhhCC---CcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999864 47999999999888876322 233344444333334444433 233445556777777777763 3
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+. + .+. .+.++.+.+.+ ......|.+.|...++.++ |..+ |.. +
T Consensus 314 ~~-~-~~~----------------~~~~~~i~~~~-~~~~~~l~~~L~~~gI~v~-~~~~-----~~~------~----- 357 (393)
T TIGR01822 314 FD-I-KPA----------------DHPIIPVMLYD-AVLAQRFARRLLEEGIYVT-GFFY-----PVV------P----- 357 (393)
T ss_pred CC-C-CCC----------------CCCEEEEEeCC-HHHHHHHHHHHHHCCeeEe-eeCC-----CCC------C-----
Confidence 21 1 111 13466676653 2345667777655576665 3221 110 0
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 501 KYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
-....||+|++..++++.++.+.++|.
T Consensus 358 ---~~~~~iRis~~~~~t~edi~~~~~~l~ 384 (393)
T TIGR01822 358 ---KGQARIRVQISAAHTEEQLDRAVEAFT 384 (393)
T ss_pred ---CCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 013469999987665555555554443
No 78
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=1.4e-23 Score=222.18 Aligned_cols=295 Identities=19% Similarity=0.170 Sum_probs=200.1
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al---l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~- 274 (532)
+..+++++.+++++|.+ +.++++++++++..++.++ +++||+|++.++.|.++...+...++..|+++.+++.+
T Consensus 60 ~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~ 139 (397)
T TIGR01976 60 QVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE 139 (397)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc
Confidence 45789999999999974 3555556668887766664 68999999999999987766655667789998887542
Q ss_pred -----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCcc
Q 009523 275 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 348 (532)
Q Consensus 275 -----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK 348 (532)
|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|+++..+ ...+..++++|+++.|+||
T Consensus 140 ~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 218 (397)
T TIGR01976 140 ATGELHPDDLASLLSP-RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYK 218 (397)
T ss_pred cCCCcCHHHHHHhcCC-CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechh
Confidence 68999999987 6999999999999999999999999999999999999997543 2334456789999999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHhhh----------cCCCccHHHHHHHHHhHHHHH-------------------H
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLH-------------------L 399 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~~~----------~G~~~~~~~a~l~l~~l~tl~-------------------~ 399 (532)
++|++ .|++++++++++.+...... ..++.+....+.+..+++.+. .
T Consensus 219 ~~g~~----~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~ 294 (397)
T TIGR01976 219 FFGPH----MGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQA 294 (397)
T ss_pred hcCCc----eEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHH
Confidence 99643 68888898887766532111 112233222222223333221 1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009523 400 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
..++..+.++++.+.|++.+.++ +..+. . + ...++++.|.+++ .....+.+.|...++.++.|..
T Consensus 295 ~~~~~~~l~~~l~~~L~~~~~~~-~~~~~-~--~---------~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~ 359 (397)
T TIGR01976 295 IDAYENRLAEYLLVGLSDLPGVT-LYGVA-R--L---------AARVPTVSFTVHG--LPPQRVVRRLADQGIDAWAGHF 359 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCC-C--c---------cCCCceEEEEeCC--cCHHHHHHHHHHCCeEEEeCcc
Confidence 12223345566666676665543 32221 0 0 0135688888864 2234566677666877776643
Q ss_pred ccccccCccccccCCCHHHHHhcCCC--CCeEEEEecCCCHHHHHHHHHHHH
Q 009523 480 ESIVDQPAIMSYWDLSQSERLKYGIM--DNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 480 ~sl~~~pa~~s~~~~~~~~~~~~gi~--~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
+. .......|++ ++.||+|++..++++.++.+.++|
T Consensus 360 ~~--------------~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 360 YA--------------VRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred ch--------------HHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 32 0111223443 468999999988887777776654
No 79
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=2.1e-23 Score=220.04 Aligned_cols=284 Identities=16% Similarity=0.172 Sum_probs=190.6
Q ss_pred CCCCCchh-HHHHHHHHHhhhC----C----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC
Q 009523 195 YGRYGNPT-TVVVEEKMSALEG----A----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 195 Y~R~~~p~-~~~Le~~lA~l~g----a----~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
+.+|+.+. ...|++.++++++ . ++.+++++| ++++..++..++++||+|++++|+|+.... .++..
T Consensus 60 ~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~ 135 (383)
T TIGR03540 60 NHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI----GTLFA 135 (383)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHH----HHHhc
Confidence 34555543 4678888888653 2 234555555 599999999999999999999999987543 34556
Q ss_pred CcEEEEeCCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 265 GITATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 265 Gv~v~~vd~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
|.++..++.+ |++++++.+.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.....
T Consensus 136 G~~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~ 214 (383)
T TIGR03540 136 GGEPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY 214 (383)
T ss_pred CCEEEEEecCcccCCccCHHHHHhhccc-cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC
Confidence 8777766532 67889888876 7999999999999999998 67888999999999999999763221
Q ss_pred ----ccccc--cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHH
Q 009523 332 ----QKALS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRV 401 (532)
Q Consensus 332 ----~~~l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~ 401 (532)
...+. ....+++.|+||.+|.+| ++.||+++++++++.+.......+...+......+...++ .+....
T Consensus 215 ~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 293 (383)
T TIGR03540 215 KAPSFLEVDGAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIR 293 (383)
T ss_pred CCcCcccCCCcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHH
Confidence 11111 124588899999998665 5689999999999888776554443444443333333332 233334
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcc
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCE 480 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~ 480 (532)
+...+++..+.+.|+++ ++. +..|. .|.++|+.++.+ .....|.+.+ +..++.+..|..+
T Consensus 294 ~~~~~~~~~~~~~L~~~-~~~-~~~~~----------------~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f 354 (383)
T TIGR03540 294 KIYQRRRDLLLEALKKI-GID-VEKPK----------------ATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGF 354 (383)
T ss_pred HHHHHHHHHHHHHHHhC-CCE-ecCCC----------------cceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhh
Confidence 44557777888888876 332 22221 245689998743 2345566654 4457777766443
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
.. ..++++|||++.. .+++.+.|
T Consensus 355 ~~---------------------~~~~~~Ris~~~~-~~~l~~~l 377 (383)
T TIGR03540 355 GE---------------------YGEGYIRISLTVP-DERLEEAV 377 (383)
T ss_pred Cc---------------------cCCCeEEEEecCC-HHHHHHHH
Confidence 10 0247899999953 34433333
No 80
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=2.8e-23 Score=215.42 Aligned_cols=286 Identities=20% Similarity=0.198 Sum_probs=203.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
.++..+.+++.+++++|.++.+++++|++++..++.+++++||+|+++++.|.+... .+...|+++..++..|+++
T Consensus 44 ~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~ 119 (349)
T cd06454 44 TSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIID----GIRLSGAKKRIFKHNDMED 119 (349)
T ss_pred CchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHH----HHHHcCCceEEecCCCHHH
Confidence 478889999999999999889999999999998888889999999999999987553 3445688888887778889
Q ss_pred HHHhhcC----CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc---------ccccccCCcEEEEC
Q 009523 279 LEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---------QKALSLGADLVLHS 345 (532)
Q Consensus 279 Le~al~~----~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~---------~~~l~~gaDivv~S 345 (532)
+++++++ .++++|++++|+||+|.+.|+++|+++|+++|+++|+|++++.+.. ......+.|+++.|
T Consensus 120 le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s 199 (349)
T cd06454 120 LEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGT 199 (349)
T ss_pred HHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEee
Confidence 9988864 3589999999999999999999999999999999999999764321 11234578999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+||.+++. +|++++++++++.++..... .++..++.....+...++.+ ..+.++..++++.+.+.|+++ +
T Consensus 200 ~sK~~~~~----gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 274 (349)
T cd06454 200 LGKAFGAV----GGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL-G 274 (349)
T ss_pred chhhhccc----CCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-C
Confidence 99999863 58888888888877654332 23345555555555555543 344556667777777777764 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+..+ .+ + .+.++++.++. .....++.+.|...++.++.++... .
T Consensus 275 ~~~~-~~-----~-----------~~~~~~~~~~~-~~~~~~~~~~L~~~gI~~~~~~~~~---~--------------- 318 (349)
T cd06454 275 FPVG-GS-----P-----------SHIIPPLIGDD-PAKAVAFSDALLERGIYVQAIRYPT---V--------------- 318 (349)
T ss_pred Cccc-CC-----C-----------CCcEEEEeCCC-hHHHHHHHHHHHhCCceEEEecCCc---c---------------
Confidence 2111 01 0 12234443432 2345666666665566665432100 0
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 501 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
...++.|||+++....++.++.+.++|+.
T Consensus 319 --~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 347 (349)
T cd06454 319 --PRGTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred --CCCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 01147899999987777777777777764
No 81
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.93 E-value=8.6e-24 Score=226.62 Aligned_cols=286 Identities=16% Similarity=0.180 Sum_probs=195.7
Q ss_pred CCCchh-HHHHHHHHHhhhC----CCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 197 RYGNPT-TVVVEEKMSALEG----AESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 197 R~~~p~-~~~Le~~lA~l~g----a~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
.|+.+. ...|++.++++++ .++.|++++| ++|+..++.++++|||.|++++|+|.... ..++..|+++..
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~----~~~~~~g~~~~~ 191 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSI----NMLRYAGFSASP 191 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCeEEe
Confidence 345443 3678888888865 2334555555 59999999999999999999999998754 345566888777
Q ss_pred eCC----CCHHHHHHhhcCCCeeEEEEe-CCCCCCCcccCHH---HHHHHHHhC-CCEEEEECCCCCCCc---cccc--c
Q 009523 271 IDP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLCHKK-GAIVCIDGTFATPLN---QKAL--S 336 (532)
Q Consensus 271 vd~----~dle~Le~al~~~~tklV~le-sP~NptG~v~dl~---~I~~la~~~-gi~lIvDet~a~~~~---~~~l--~ 336 (532)
++. .|+++|++++++ ++++++++ +|+||||.+++.+ +|.++|+++ ++++|+||+|..... ..++ .
T Consensus 192 v~~~~~g~~~~~l~~~~~~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 270 (431)
T PRK15481 192 VSVDAEGMQPEKLERALAQ-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQT 270 (431)
T ss_pred eccCCCCCCHHHHHHHHhc-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCC
Confidence 754 368999999876 68998987 9999999999976 899999999 999999999764321 1111 1
Q ss_pred cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHHH
Q 009523 337 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 410 (532)
Q Consensus 337 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a~~ 410 (532)
....+++.|+||.++ +| .+.||+++++++++.+...........+...+.++...++. +....+...++.+.
T Consensus 271 ~~~vi~~~SfSK~~~-~G-lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~ 348 (431)
T PRK15481 271 TQRWALIRSVSKALG-PD-LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQK 348 (431)
T ss_pred CCCEEEEeeeccccC-CC-ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 234589999999999 55 57889999999998887654443334566655555555432 22233444566677
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.|+++ ++. +..|. .|.++|+.++.+ ...+.+.+...++.+..|..+.. +
T Consensus 349 ~~~~L~~~-~~~-~~~p~----------------gg~f~~~~l~~~---~~~~~~~l~~~gV~v~pg~~f~~---~---- 400 (431)
T PRK15481 349 LARALQQY-GIA-IPSPG----------------DGLNLWLPLDTD---SQATALTLAKSGWLVREGEAFGV---S---- 400 (431)
T ss_pred HHHHHHHc-CCc-cccCC----------------CeEEEEEECCCC---HHHHHHHHHHCCcEEecCCcccc---C----
Confidence 77888765 221 21221 577899998743 24455555556777777754321 0
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 530 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~ed---~~dli~dL~~AL~ 530 (532)
-..+++|||++..+ .++.++.|.+++.
T Consensus 401 -------------~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 401 -------------APSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred -------------CCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 01368999999744 3445555555543
No 82
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=3.9e-23 Score=218.39 Aligned_cols=284 Identities=15% Similarity=0.121 Sum_probs=189.7
Q ss_pred chhHHHHHHHHHhhhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 200 NPTTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~g------a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.+....|++.+|++++ . ++.++++++++++..++.+++++||+|++++|+|......+ ...|.++..+
T Consensus 68 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~v 143 (387)
T PRK08960 68 ARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFL----RLVEGAAQLV 143 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhcCCeEEEE
Confidence 3456778888888863 2 34555556669999999999999999999999999866443 3345565555
Q ss_pred CC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHH---HHHHHHHhCCCEEEEECCCCCCCcc----ccccc
Q 009523 272 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ----KALSL 337 (532)
Q Consensus 272 d~-------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~---~I~~la~~~gi~lIvDet~a~~~~~----~~l~~ 337 (532)
+. .|++++++++++ +++++++++|+||||.+++.+ +|+++|+++|+++|+|++|...... .....
T Consensus 144 ~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~ 222 (387)
T PRK08960 144 PVGPDSRYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV 222 (387)
T ss_pred ecCcccCCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc
Confidence 32 368899998887 689999999999999999854 6777789999999999997643211 11122
Q ss_pred -CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHH
Q 009523 338 -GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRM 411 (532)
Q Consensus 338 -gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~l 411 (532)
...+++.|+||.+|.+| .+.||+++++++++.++..........+...+.++...+. .+....++..++.+.+
T Consensus 223 ~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l 301 (387)
T PRK08960 223 DDDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFL 301 (387)
T ss_pred cCCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHH
Confidence 23478899999998666 5689999999999888876655544455554444433332 2333334445667778
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCcccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
.+.|++++ +..+.+|. .|.++|++++........|.+.+ +..++.+..|..++.
T Consensus 302 ~~~L~~~~-~~~~~~p~----------------g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------- 356 (387)
T PRK08960 302 LPALRELG-FGIAVEPQ----------------GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR-------- 356 (387)
T ss_pred HHHHHhcC-CcCCcCCC----------------eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC--------
Confidence 88887753 21112221 36678888863111234555553 445777777754321
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 527 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~ 527 (532)
+..++++||+++. +.+++.+.+++
T Consensus 357 ------------~~~~~~iRi~~~~-~~~~l~~al~~ 380 (387)
T PRK08960 357 ------------HQAGQHVRFAYTQ-SLPRLQEAVER 380 (387)
T ss_pred ------------CCCCCeEEEEecC-CHHHHHHHHHH
Confidence 0124699999997 45555555443
No 83
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.7e-23 Score=219.49 Aligned_cols=286 Identities=12% Similarity=0.130 Sum_probs=190.9
Q ss_pred CCCCchh-HHHHHHHHHhhhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 196 GRYGNPT-TVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 196 ~R~~~p~-~~~Le~~lA~l~g------a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
.+|+++. ...|++++|++++ . ++.++++++++|+..++.+++++||+|+++.|+|...... +...|.
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~----~~~~g~ 135 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQ----IEMVGG 135 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH----HHHcCC
Confidence 4455554 4678888888762 2 3455566666999999999999999999999999886543 344566
Q ss_pred EEEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc---c
Q 009523 267 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K 333 (532)
Q Consensus 267 ~v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~---~ 333 (532)
++..++. .|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .
T Consensus 136 ~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 136 KPIILETYEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEEEecCCcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 6666542 378999998876 6999999999999999997 667888899999999999998754211 1
Q ss_pred c---cc--cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH----HHHHHHH
Q 009523 334 A---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL----HLRVQQQ 404 (532)
Q Consensus 334 ~---l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl----~~r~~~~ 404 (532)
+ +. .+..+++.|+||.++.+| ++.||+++++++++.++........+.++.....+...+... ....+..
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 293 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMTG-WRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEF 293 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCcc-ccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 11 234689999999998555 568999999999888877665444444555544444444322 2222333
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCccccc
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIV 483 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~ 483 (532)
.++.+.+.+.|++.+++ .+..|. .|.++|++++........|.+.+ +..++.+..|..+..
T Consensus 294 ~~r~~~~~~~L~~~~~~-~~~~p~----------------gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~- 355 (384)
T PRK06348 294 QKRLEYAYKRIESIPNL-SLHPPK----------------GSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE- 355 (384)
T ss_pred HHHHHHHHHHHhcCCCc-eeccCC----------------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc-
Confidence 45566677778765543 222221 34467888863112234455544 345777777754320
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 526 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~ 526 (532)
..+++|||+++. +.+++.+.++
T Consensus 356 --------------------~~~~~iRi~~~~-~~~~l~~al~ 377 (384)
T PRK06348 356 --------------------SGEGYIRLACTV-GIEVLEEAFN 377 (384)
T ss_pred --------------------CCCCeEEEEecC-CHHHHHHHHH
Confidence 124789999985 5555544443
No 84
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=219.44 Aligned_cols=282 Identities=19% Similarity=0.280 Sum_probs=196.2
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+.+|+++...+|++.+|+++|.+ +.|++++|+ +++..++.+++++||+|+++.|+|.... ..++..|+++..+
T Consensus 57 ~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i 132 (356)
T PRK04870 57 LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGV 132 (356)
T ss_pred cccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEe
Confidence 34556666789999999999863 356666666 8899999999999999999999998643 4456678888887
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc---c-cccCCcEE
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LSLGADLV 342 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~---~-l~~gaDiv 342 (532)
+. .|+++|++++++.++++|++++|+||||.+++.+++.++++..++++|+|++|....... . ......++
T Consensus 133 ~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 212 (356)
T PRK04870 133 PLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLV 212 (356)
T ss_pred cCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEE
Confidence 64 368999999865479999999999999999999988888877789999999976432111 1 12234589
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~p 419 (532)
+.|+|| ++.+| .+.|++++++++++.++...... ..+....+.+...+ +.+...+++..++++.+.+.|++.+
T Consensus 213 ~~S~SK-~~~~G-lRiG~~i~~~~~i~~~~~~~~~~--~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (356)
T PRK04870 213 MRTVSK-LGLAG-LRLGYLAGHPAWIAELDKVRPPY--NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALP 288 (356)
T ss_pred Eecchh-hhhHH-HhhhhhhCCHHHHHHHHHccCCC--cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 66555 45789999999998887654322 34444333333333 3344445556677778888888776
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHH
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
++. + +|. .|+++++.++ + ...+.+.|...++.+..|..+.
T Consensus 289 ~~~-~-~~~----------------~~~~~~~~~~-~---~~~~~~~l~~~gI~v~~~~~f~------------------ 328 (356)
T PRK04870 289 GVT-V-FPS----------------AANFILVRVP-D---AAAVFDGLKTRGVLVKNLSGMH------------------ 328 (356)
T ss_pred CcE-E-CCC----------------CCeEEEEECC-C---HHHHHHHHHHCCEEEEECCCCC------------------
Confidence 652 2 231 3668999886 2 2345556666677776654321
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 500 LKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+..++++|||++.. +..+.|.++|+
T Consensus 329 ---~~~~~~iRis~~~~---~~~~~l~~al~ 353 (356)
T PRK04870 329 ---PLLANCLRVTVGTP---EENAQFLAALK 353 (356)
T ss_pred ---CCCCCeEEEeCCCH---HHHHHHHHHHH
Confidence 01257999999952 22344444544
No 85
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=1e-23 Score=218.48 Aligned_cols=283 Identities=17% Similarity=0.209 Sum_probs=184.3
Q ss_pred CCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga-~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.||++|...+|++++|+++|. ...|++++|+ +++..++. ++++|+ |++.+|+|.... ..++..|+++..++
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~----~~~~~~G~~v~~vp 107 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK----GYAFTHGIRISALP 107 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH----HHHHHcCCeEEEEe
Confidence 5789999999999999999997 3456565565 89988886 567775 666689998644 45566788888876
Q ss_pred CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCccc--c-c----ccCCcEE
Q 009523 273 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQK--A-L----SLGADLV 342 (532)
Q Consensus 273 ~~dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~~~--~-l----~~gaDiv 342 (532)
.++.+...+.++..++++|++++|+||||.+++. ++|+++|+++|+++|+||+|....... + . ..+..++
T Consensus 108 ~~~~~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~ 187 (332)
T PRK06425 108 FNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVII 187 (332)
T ss_pred CCcccCcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEE
Confidence 5321111222322368999999999999999984 567777889999999999976543211 1 1 1234689
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHH-hHHHH-HHHHHHHHHHHHHHHHHHHhCCC
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-GMKTL-HLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~-~l~tl-~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+.|+||.++-+| ++.||+++++++++.+........ .+...+..+.. ..+.+ ....+...++.+.+.+.|+++ +
T Consensus 188 ~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g 263 (332)
T PRK06425 188 GRSLTKILGIPS-LRIGYIATDDYNMKISRKITEPWS--VCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-G 263 (332)
T ss_pred EeecHHhcCCch-hhheeeecCHHHHHHHHHcCCCCc--cCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 999999999555 468999999999988876543322 23322222211 11222 222344456677778888775 3
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+. +..|. .|+++++.++. ...|.+.+...++.+..|..+.
T Consensus 264 ~~-~~~~~----------------~g~f~~~~~~~----~~~~~~~l~~~gi~v~~~~~f~------------------- 303 (332)
T PRK06425 264 FR-AAGDP----------------SANFITFMIPD----AHDFYSYLLKNGILVRLLDDYE------------------- 303 (332)
T ss_pred CE-ECCCC----------------CceEEEEEcCC----HHHHHHHHHHCCeEEEECCCCC-------------------
Confidence 32 22121 36788998862 3445555544577777664321
Q ss_pred hcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009523 501 KYGIMDNLVRFSFGVE-DFEDLKADVLQAL 529 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~e-d~~dli~dL~~AL 529 (532)
+..+++||||+|.. +.+.+++.|++.+
T Consensus 304 --~~~~~~iRis~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 304 --CLGEQYIRIAIRRRSFNIKLVNALRNFL 331 (332)
T ss_pred --CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 11257999999974 4455666665544
No 86
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.93 E-value=2.2e-24 Score=230.84 Aligned_cols=212 Identities=23% Similarity=0.303 Sum_probs=178.8
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC---CcchHHHHHHhcccCCcEEEEeCC---C
Q 009523 201 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---A 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~---y~~t~~~~~~~l~~~Gv~v~~vd~---~ 274 (532)
+..+.+|+.+++++|++++++++||++|+.+++. .+.+||+||+++.. |+++..+ ...++..|+++++++. .
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~ 199 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLALN-TLAKGKEVIVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRT 199 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCcCEEEECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCC
Confidence 4578899999999999999999999999988885 46899999999877 5565554 3456778999999976 4
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCCC--C--cccCHHHHHHHHHhCCCEEEEECCCC------------CCCcccccccC
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLG 338 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~Npt--G--~v~dl~~I~~la~~~gi~lIvDet~a------------~~~~~~~l~~g 338 (532)
+++++++++++ +|++|++++++|++ | .+.|+++|+++||++|+++++|++.+ .+..+++.+.|
T Consensus 200 ~l~dle~aI~~-~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~G 278 (454)
T TIGR00474 200 HLKDYEDAITE-NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAG 278 (454)
T ss_pred CHHHHHHhcCc-CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcC
Confidence 78999999988 79999999999995 5 58899999999999999999999732 22234677899
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHH----------------HHhhhcCCCccHHHHHHHHHhHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR----------------NLHHVLGGALNPNAAYLIIRGMKTLHLRVQ 402 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~----------------~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~ 402 (532)
+|++++|++|+++|| .+|+++++++++++++ .+...+|..++|..+|..+++++++..|++
T Consensus 279 aDiv~fSg~K~LgGp---~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~ 355 (454)
T TIGR00474 279 VDLVTFSGDKLLGGP---QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPE 355 (454)
T ss_pred CCEEEecCccccCCC---eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHH
Confidence 999999999999988 4899999988775432 123355677888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC
Q 009523 403 QQNSTALRMAKILEAH 418 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~ 418 (532)
++.+++++++++|++.
T Consensus 356 ~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 356 ELRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 87
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.93 E-value=5.2e-23 Score=216.57 Aligned_cols=274 Identities=18% Similarity=0.212 Sum_probs=185.1
Q ss_pred hHHHHHHHHHhh----hC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSAL----EG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l----~g--a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
....|++.++++ +| . ++.+++++|++++..++.+++++||+|++++|+|.... ..++..|+++..++.
T Consensus 62 G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~ 137 (382)
T PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLV----AAPKILGARVVCVPL 137 (382)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchH----HHHHHCCCEEEEeeC
Confidence 345566666665 35 2 45566667779999999999999999999999998654 344566888877654
Q ss_pred --------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc------ccc-
Q 009523 274 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------KAL- 335 (532)
Q Consensus 274 --------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~------~~l- 335 (532)
.|+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... ...
T Consensus 138 ~~~~~~~~~d~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 216 (382)
T PRK06108 138 DFGGGGWTLDLDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLD 216 (382)
T ss_pred CCCCCCccCCHHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhh
Confidence 268899998876 6999999999999999986 567888999999999999997643211 001
Q ss_pred --c-cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHH
Q 009523 336 --S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTA 408 (532)
Q Consensus 336 --~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a 408 (532)
. ....+++.|+||.+|.+| .+.|++++++++++.+...........++..+.++...++. +....++..++.
T Consensus 217 ~~~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 295 (382)
T PRK06108 217 IAEPDDRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSR 295 (382)
T ss_pred cCCCcCCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 1 134588999999997655 46799999999998887655433333455544444433332 333344455667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa 487 (532)
+.+.+.|++.+++. +..|. .|.++++.+++. .....|.+.| +..++.+..|..+. +
T Consensus 296 ~~l~~~L~~~~~~~-~~~p~----------------~g~~~~~~l~~~-~~~~~~~~~ll~~~gV~v~pg~~f~----~- 352 (382)
T PRK06108 296 DHLVDALRALPGVE-VAKPD----------------GAMYAFFRIPGV-TDSLALAKRLVDEAGLGLAPGTAFG----P- 352 (382)
T ss_pred HHHHHHHHhCCCCc-ccCCC----------------eeEEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCchhhC----C-
Confidence 77788887765542 21121 345678888642 2234555554 44577776664321 0
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 521 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dl 521 (532)
..++++|||++. +.+++
T Consensus 353 ----------------~~~~~~Ris~~~-~~~~l 369 (382)
T PRK06108 353 ----------------GGEGFLRWCFAR-DPARL 369 (382)
T ss_pred ----------------CCCCEEEEEecC-CHHHH
Confidence 125799999998 54443
No 88
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=5.2e-23 Score=217.57 Aligned_cols=284 Identities=17% Similarity=0.181 Sum_probs=197.2
Q ss_pred hhHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 201 PTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.....|++.+|+++ |. ++.++++++++|+..++.+++++||+|++++|+|.... ..++..|+++..++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~ 143 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYP----EMVKLAGGVPVFVP 143 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCCEEEEEe
Confidence 34678889999886 21 34666666679999999999999999999999998754 33455688888776
Q ss_pred CC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-------cc-
Q 009523 273 PA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-------KA- 334 (532)
Q Consensus 273 ~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-------~~- 334 (532)
.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... ..
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 222 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL 222 (393)
T ss_pred cCcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc
Confidence 43 57899999876 6999999999999999986 778899999999999999997653210 11
Q ss_pred --cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009523 335 --LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 408 (532)
Q Consensus 335 --l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a 408 (532)
...+.++++.|+||.++.+| ...|++++++++++.++......+...++..++.+.+.++ .+....++..++.
T Consensus 223 ~~~~~~~~i~~~s~SK~~~~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (393)
T PRK05764 223 SPELRDRTITVNGFSKAYAMTG-WRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERR 301 (393)
T ss_pred CCCCcCCEEEEecCcccccCcc-ceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 11246799999999998666 3579999999999998877665555666776666555553 2223334445667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH----HHHHHHHHc-CCCceeecCCCccccc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT----ATIKFIDAL-KIPYIAPSFGGCESIV 483 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~----~~~~~l~~L-~~~~i~vs~G~~~sl~ 483 (532)
+.+.+.|++++++. +..|. .|.++|+.++.... ....+.+.+ +..++.+..|..+.
T Consensus 302 ~~l~~~L~~~~g~~-~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-- 362 (393)
T PRK05764 302 DLMVDGLNEIPGLE-CPKPE----------------GAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG-- 362 (393)
T ss_pred HHHHHHHhhCCCCc-ccCCC----------------cceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC--
Confidence 77788888775542 21111 34567887764211 124454443 44577776664321
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
. +++||||++. ++.++.++.|.++++
T Consensus 363 --------------------~-~~~vRis~~~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 363 --------------------A-PGYVRLSYATSLEDLEEGLERIERFLE 390 (393)
T ss_pred --------------------C-CCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 5799999986 333444555555554
No 89
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=1.3e-23 Score=221.17 Aligned_cols=286 Identities=11% Similarity=0.134 Sum_probs=192.2
Q ss_pred chhHHHHHHHHHhhhC----C----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 200 NPTTVVVEEKMSALEG----A----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~g----a----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
.+....|++++|++++ . + +.+++++|++|+.+++.+++++||+|++++|+|+.... .++..|.++..
T Consensus 56 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~ 131 (378)
T PRK07682 56 NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAP----LVTLAGGVPVP 131 (378)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHH----HHHHcCCEEEE
Confidence 4567788888888774 2 3 35555566799999999999999999999999986543 33445666655
Q ss_pred eCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc------cc
Q 009523 271 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------KA 334 (532)
Q Consensus 271 vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~------~~ 334 (532)
++. .|+++|++++.+ ++++|++++|+||||.+++ +++|+++|+++++++|+|++|...... ..
T Consensus 132 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 210 (378)
T PRK07682 132 VATTLENEFKVQPAQIEAAITA-KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFAS 210 (378)
T ss_pred eecCCccCCCCCHHHHHhhcCc-ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhh
Confidence 542 378999999877 6999999999999999986 778899999999999999997653311 11
Q ss_pred cc--cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHH
Q 009523 335 LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTA 408 (532)
Q Consensus 335 l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a 408 (532)
+. ....+++.|+||.++.+| .+.|++++++++++.+...........+...+.++.+.++. +....+...+++
T Consensus 211 ~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 289 (378)
T PRK07682 211 IKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR 289 (378)
T ss_pred cccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 11 134689999999998554 45799999999999887765443344455555554544432 333344455677
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa 487 (532)
+.+.+.|+++ ++ .+..|. .|.++|+.++........|.+.+ +..++.+..|..+. +
T Consensus 290 ~~~~~~L~~~-~~-~~~~p~----------------g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~----~- 346 (378)
T PRK07682 290 NFFVTSFNEI-GL-TCHVPG----------------GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG----E- 346 (378)
T ss_pred HHHHHHHHHC-CC-ccCCCC----------------eeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhC----c-
Confidence 7788888875 32 122221 34566777742112234566554 34577777764431 0
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 530 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~ 530 (532)
-.++++|||++.+ +.++.++.|.++++
T Consensus 347 ----------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 347 ----------------SGEGFIRCSYATSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred ----------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 0257999999973 23344555555554
No 90
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.3e-23 Score=220.43 Aligned_cols=273 Identities=14% Similarity=0.169 Sum_probs=188.4
Q ss_pred CchhHHHHHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 199 GNPTTVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~----g--a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
+.+....|++++|+++ | . ++.+++++|++|+..++.+++++||+|++++|+|.+... .+...|+++..
T Consensus 68 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~----~~~~~g~~~~~ 143 (391)
T PRK08361 68 PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE----DAKIAEAKPIR 143 (391)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH----HHHHcCCEEEE
Confidence 3456678899999886 3 2 356666667799999999999999999999999988553 34456777776
Q ss_pred eCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----cc--
Q 009523 271 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-- 334 (532)
Q Consensus 271 vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~-- 334 (532)
++. .|++++++.+++ ++++|++++|+||||.++| +++|+++|+++++++|+|++|...... .+
T Consensus 144 v~~~~~~~~~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (391)
T PRK08361 144 IPLREENEFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMI 222 (391)
T ss_pred EecCCccCCCCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHh
Confidence 643 478999999987 6999999999999999999 788999999999999999998653211 01
Q ss_pred -cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHH
Q 009523 335 -LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNST 407 (532)
Q Consensus 335 -l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~ 407 (532)
.....++++.|+||.+|.+| .+.|++++++++++.+...........+.....++...++. +....++..++
T Consensus 223 ~~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK08361 223 KYAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNER 301 (391)
T ss_pred hcCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 11235789999999998665 45799999999988887665443344455544444444421 23333444566
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccC
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~p 486 (532)
...+.+.|++.+++. +..|. .|.++|++++........|.+.+ +..++.+..|..+.
T Consensus 302 ~~~~~~~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~----- 359 (391)
T PRK08361 302 RKLVLKRLKEMPHIK-VFEPK----------------GAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFG----- 359 (391)
T ss_pred HHHHHHHHHhCCCCe-ecCCC----------------EEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhC-----
Confidence 667788888766542 32221 34568888863111234455544 34567776664421
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
...++++||+++.
T Consensus 360 ----------------~~~~~~iRi~~~~ 372 (391)
T PRK08361 360 ----------------KAGEGYIRISYAT 372 (391)
T ss_pred ----------------CCCCCEEEEEecC
Confidence 0124789999996
No 91
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.7e-23 Score=217.02 Aligned_cols=285 Identities=19% Similarity=0.258 Sum_probs=196.4
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG-~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
..+|+++....|+++||+++|.+ +.|++++| ++++.+++.+++.+| |.|++++|.|.... ..++..|.++..+
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v 128 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEV 128 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 56788888899999999999863 34555555 599999999999999 79999999886432 3345568888777
Q ss_pred CCC--------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCcc-cc---c-c
Q 009523 272 DPA--------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ-KA---L-S 336 (532)
Q Consensus 272 d~~--------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~-~~---l-~ 336 (532)
+.. |++++++.+...++++|++++|+||||.+++.+++.++++. +++++|+||+|...... .. . .
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~ 208 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLAR 208 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhh
Confidence 531 56777555433379999999999999999998888888764 47899999998754321 11 1 1
Q ss_pred cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHH
Q 009523 337 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRM 411 (532)
Q Consensus 337 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~l 411 (532)
....+++.|+||.+|-+| ++.||+++++++++.+++....++ .+.....++...++ .+..++++..++++.+
T Consensus 209 ~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRCQAPYP--VPTPCAALAEQALSAPALAVTARRVAEVRAERERL 285 (364)
T ss_pred CCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhccCCCC--CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 234589999999998555 568999999999999887765443 23333333333332 3344455566777888
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
.+.|++++++..+ +|. .|+++|++++. ...+.+.+...++.+..|..+ +
T Consensus 286 ~~~L~~~~~~~~~-~p~----------------~g~f~~~~~~~----~~~~~~~l~~~gI~v~~~~~~-----~----- 334 (364)
T PRK04781 286 HAALAQLPGVRRV-YPS----------------QGNFLLVRFDD----AEAAFQALLAAGVVVRDQRAA-----P----- 334 (364)
T ss_pred HHHHHhCCCCCeE-CCC----------------CCcEEEEEcCC----HHHHHHHHHHCCeEEeeCCCC-----C-----
Confidence 8889877654333 332 47789999863 234555555567777665321 0
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHH
Q 009523 492 WDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQAL 529 (532)
Q Consensus 492 ~~~~~~~~~~~gi~~~~IRlSvG~ed-~~dli~dL~~AL 529 (532)
+ .++++||++|..+ .+.+++.|++..
T Consensus 335 -----------~-~~~~~Ris~~~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 335 -----------R-LSDALRITLGTPEQNDRVLAALQRTQ 361 (364)
T ss_pred -----------C-CCCeEEEeCCCHHHHHHHHHHHHHHH
Confidence 1 2578999999743 355666665543
No 92
>PLN02187 rooty/superroot1
Probab=99.93 E-value=7.4e-23 Score=221.11 Aligned_cols=286 Identities=15% Similarity=0.142 Sum_probs=188.1
Q ss_pred chhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 200 NPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~g--------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.+....|++++|++++ .+++++++++++|+..++.++++|||+|++++|+|+... ..+...|+++..+
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~----~~~~~~g~~~~~~ 182 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYD----ARAAYSGLEVRKF 182 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHH----HHHHHcCCEEEEE
Confidence 4456779999999873 134555555569999999999999999999999999743 3345668887776
Q ss_pred CC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccc-c
Q 009523 272 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL-S 336 (532)
Q Consensus 272 d~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l-~ 336 (532)
+. .|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..... ..++ .
T Consensus 183 ~l~~~~~~~~d~~~l~~~~~~-~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~ 261 (462)
T PLN02187 183 DLLPEKEWEIDLEGIEAIADE-NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK 261 (462)
T ss_pred eCccccCCccCHHHHHHhcCC-CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH
Confidence 53 278999998877 6899999999999999998 67888889999999999999875321 1111 1
Q ss_pred c---CCcEEEECCccccCCCCCcEEEEEEeC-hH----HHHHHHHHhhhcCC--CccHHHHHHHHHhHH-----HHHHHH
Q 009523 337 L---GADLVLHSATKFIGGHNDVLAGSISGS-GK----LVTQIRNLHHVLGG--ALNPNAAYLIIRGMK-----TLHLRV 401 (532)
Q Consensus 337 ~---gaDivv~S~sK~lgg~gd~~gG~lv~~-~~----li~~l~~~~~~~G~--~~~~~~a~l~l~~l~-----tl~~r~ 401 (532)
. ...+++.|+||.|+.+| .+.||++++ ++ +++.+.......+. ..+.+...++...++ .+....
T Consensus 262 ~~~~~~vi~l~SfSK~f~~pG-lRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~ 340 (462)
T PLN02187 262 FASIVPVLTLAGISKGWVVPG-WKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKN 340 (462)
T ss_pred hccCCcEEEEecchhhcCCcc-ceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1 12588899999998877 467888873 32 23455544443322 224444444444442 234444
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----CHHHHHHHH-HHcCCCceeecC
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFI-DALKIPYIAPSF 476 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g----~~~~~~~~l-~~L~~~~i~vs~ 476 (532)
+...++++.+.+.|++++.+..+..|. .|.++++.++. +......++ ..++..++.+..
T Consensus 341 ~~l~~~r~~l~~~L~~~~~~~~~~~P~----------------gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~p 404 (462)
T PLN02187 341 KILKHNVDLVCDRLKDIPCVVCPKKPE----------------SCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLP 404 (462)
T ss_pred HHHHHHHHHHHHHHhhCCCCcCCCCCC----------------EeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEEC
Confidence 555677788888888765432111221 46678887642 111122333 333556777777
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHh
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED--FEDLKADVLQALH 530 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed--~~dli~dL~~AL~ 530 (532)
|..+ | .+++|||+++..+ .++.++.|.+.++
T Consensus 405 G~~f----------------------g-~~~~iRis~~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 405 GDAL----------------------G-LKNWMRITIGVEAHMLEDALERLKGFCT 437 (462)
T ss_pred cccc----------------------C-CCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 7543 1 1579999999742 2444555555543
No 93
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=1.5e-23 Score=217.92 Aligned_cols=280 Identities=18% Similarity=0.257 Sum_probs=197.0
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+.+...++|+.+|++++. ++.++++++++++..++.+++++||+|++++|+|.... ..++..|+++..++.
T Consensus 49 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~ 124 (346)
T TIGR01141 49 HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPL 124 (346)
T ss_pred hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecc
Confidence 456677778999999999986 34555555568999999999999999999999986432 344567888888764
Q ss_pred -----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCcc-cc---c-ccCCcE
Q 009523 274 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KA---L-SLGADL 341 (532)
Q Consensus 274 -----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~~-~~---l-~~gaDi 341 (532)
.|++++++++.+ ++++|++++|+||||.+.|++++.++|+.+ |+++|+|++|...... .+ . ....++
T Consensus 125 ~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 125 DEDGQLDLEDILVAIDD-KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCCCCCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEE
Confidence 378999998876 699999999999999999999999999876 9999999997632211 11 1 123458
Q ss_pred EEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 342 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 342 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
++.|+||++|.+| ...|+++++++++++++.....++ .++.....+...++ .+....++..++++.+.+.|+++
T Consensus 204 ~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 204 VLRTLSKAFGLAG-LRIGYAIANAEIIDALNKVRAPFN--LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred EEehhhHhhhchh-hhceeeecCHHHHHHHHhccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999997665 457999999999888876544333 33444333333332 23344555667788888888887
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHH
Q 009523 419 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 498 (532)
Q Consensus 419 p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~ 498 (532)
+++. + .|. .|.++++++++ ..+.+.+.|...++.+..|..+.
T Consensus 281 ~g~~-~-~~~----------------~g~~~~~~~~~---~~~~~~~~L~~~gI~v~~g~~f~----------------- 322 (346)
T TIGR01141 281 PGLE-V-YPS----------------DANFVLIRFPR---DADALFEALLEKGIIVRDLNSYP----------------- 322 (346)
T ss_pred CCCE-E-CCC----------------cCCEEEEecCC---CHHHHHHHHHHCCeEEEeCCCcC-----------------
Confidence 6653 2 221 35689999874 34556666655677777664321
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 499 RLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 499 ~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
+. ++++|+|++. ++.++.+.++|
T Consensus 323 ----~~-~~~iRls~~~---~~~i~~~~~~l 345 (346)
T TIGR01141 323 ----GL-PNCLRITVGT---REENDRFLAAL 345 (346)
T ss_pred ----CC-CCeEEEecCC---HHHHHHHHHHh
Confidence 12 5789999983 33355555554
No 94
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1.4e-23 Score=219.33 Aligned_cols=284 Identities=14% Similarity=0.195 Sum_probs=189.6
Q ss_pred CCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.+|+.+...+|++.+|+++|.+ +.+++++|+ +++..++..++++||+|++++|+|.... ..++..|+++..++
T Consensus 64 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~ 139 (361)
T PRK00950 64 HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAK 139 (361)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEee
Confidence 4566677799999999999863 345547776 7888888888999999999999887533 34556788887775
Q ss_pred C-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc--ccc--ccCCcEEE
Q 009523 273 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KAL--SLGADLVL 343 (532)
Q Consensus 273 ~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~--~~l--~~gaDivv 343 (532)
. .|++++++++++ ++++|++++|+||||.+.|.+++.++|+++|+++|+|++|...... ..+ .....+++
T Consensus 140 ~~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~ 218 (361)
T PRK00950 140 REEDFSLDVDSVLNAITE-KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIG 218 (361)
T ss_pred cCCCCCcCHHHHHHHhcc-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEE
Confidence 2 368899998876 6999999999999999999999999999999999999998643211 111 12334888
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR 423 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 423 (532)
.|+||.+|.+| .+.|++++++++++.++.....++ .++.....+...++.. ..++++.+..+...+.|.+.-.+ .
T Consensus 219 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l~~~l~~-~ 293 (361)
T PRK00950 219 RTFSKVFGLAG-LRIGYGFVPEWLIDYYMRAKTPFS--LTRLSQAAAIAALSDK-EYIEKSIEHGIKSREYLYNELPF-K 293 (361)
T ss_pred EeehHhhcCch-hhcchhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhhcCe-e
Confidence 99999998665 467999999999988877654433 3445444444444321 11222222233333333321112 1
Q ss_pred EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcC
Q 009523 424 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 503 (532)
Q Consensus 424 V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~g 503 (532)
+ +|. .|+++++.+++ .....|.+.|...++.+..|..+. +
T Consensus 294 ~-~~~----------------~~~~i~~~~~~--~~~~~~~~~l~~~gv~v~~~~~f~---------------------~ 333 (361)
T PRK00950 294 V-YPS----------------EANFVLVDVTP--MTAKEFCEELLKRGVIVRDCTSFR---------------------G 333 (361)
T ss_pred E-CCC----------------cceEEEEECCC--CCHHHHHHHHHHCCEEEeeCCccC---------------------C
Confidence 2 221 35688998853 234556666555577666553210 1
Q ss_pred CCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009523 504 IMDNLVRFSFGVE-DFEDLKADVLQAL 529 (532)
Q Consensus 504 i~~~~IRlSvG~e-d~~dli~dL~~AL 529 (532)
..+++||||++.+ +.+.+++.|+++|
T Consensus 334 ~~~~~lRis~~~~~~~~~l~~~L~~il 360 (361)
T PRK00950 334 LGDYYIRVSIGTFEENERFLEILKEIV 360 (361)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHHHh
Confidence 1357899999942 3345555555544
No 95
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5.8e-23 Score=217.68 Aligned_cols=285 Identities=13% Similarity=0.103 Sum_probs=186.6
Q ss_pred CCCch-hHHHHHHHHHhhh----CC----CcEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 197 RYGNP-TTVVVEEKMSALE----GA----ESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 197 R~~~p-~~~~Le~~lA~l~----ga----~~~i~~-sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
+|+++ ....|++++|+++ |. ++.+++ +++++++..++.+++++||+|++++|+|+..... +...|+
T Consensus 68 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~----~~~~g~ 143 (394)
T PRK05942 68 GYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRG----PLIAGA 143 (394)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHHcCC
Confidence 34443 3467888888876 42 234554 5556999999999999999999999999885533 344677
Q ss_pred EEEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----
Q 009523 267 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 332 (532)
Q Consensus 267 ~v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~---- 332 (532)
++..++. .|++++++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|......
T Consensus 144 ~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 222 (394)
T PRK05942 144 QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQP 222 (394)
T ss_pred EEEEeecCCccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC
Confidence 7777643 368899988876 7999999999999999998 678888999999999999997643210
Q ss_pred cc---cc--cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHH
Q 009523 333 KA---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQ 403 (532)
Q Consensus 333 ~~---l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~ 403 (532)
.+ +. ....+++.|+||.+|.+| .+.|++++++++++.++......+...+...+.++...++. +....++
T Consensus 223 ~~~~~~~~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 301 (394)
T PRK05942 223 TSLLEIPGAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQER 301 (394)
T ss_pred CChhhCCCccccEEEEecchhccCChh-hheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 11 11 124588899999997655 46899999999999988766543433444444444444432 2222333
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH-HcCCCceeecCCCcccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID-ALKIPYIAPSFGGCESI 482 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~-~L~~~~i~vs~G~~~sl 482 (532)
..++.+.+.+.|++. ++ .+..|. .|.++|+.++... ....+.. .++..++.+..|..+.
T Consensus 302 ~~~~~~~~~~~L~~~-~~-~~~~~~----------------~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~- 361 (394)
T PRK05942 302 YRTRRDFLIQGLGEL-GW-NIPPTK----------------ATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFG- 361 (394)
T ss_pred HHHHHHHHHHHHHHC-CC-eecCCC----------------eeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhC-
Confidence 445566677777664 23 121111 3447899987431 1223333 3334566666664321
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQA 528 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~A 528 (532)
+ ...++|||+++ .+.+.+.+.|++.
T Consensus 362 ---~-----------------~~~~~iRis~~-~~~~~l~~~l~~l 386 (394)
T PRK05942 362 ---E-----------------GGEGYVRISLI-ADCDRLGEALDRL 386 (394)
T ss_pred ---c-----------------CCCCeEEEEec-CCHHHHHHHHHHH
Confidence 0 12579999998 4456665555543
No 96
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1.2e-23 Score=220.56 Aligned_cols=285 Identities=14% Similarity=0.215 Sum_probs=196.1
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.+|+.+....|++.+|++++.+ +.|++++|+ +++..++.+++++||+|++++|.|.... ......|+++..++
T Consensus 61 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~ 136 (367)
T PRK02731 61 LHRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYP----IAAQAVGAKPVEVP 136 (367)
T ss_pred hcCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHH----HHHHHcCCeEEEec
Confidence 45666666789999999999874 456666665 8888888889999999999999996533 23455788888776
Q ss_pred C----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCc-------ccccc-cC
Q 009523 273 P----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-------QKALS-LG 338 (532)
Q Consensus 273 ~----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~-------~~~l~-~g 338 (532)
. .|++++++++++ ++++|++++|+||||.+++.+++.++++.+ |+++|+|++|..... ..... ..
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 215 (367)
T PRK02731 137 AKDYGHDLDAMLAAVTP-RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFP 215 (367)
T ss_pred ccCCCCCHHHHHHHhCC-CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcC
Confidence 4 378999999976 799999999999999999999999998874 899999999754321 11111 12
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 415 (532)
..+++.|+||.+|.+| ...|++++++++++.+......++ .+....+.+...++. +....+...++.+.+.+.|
T Consensus 216 ~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 216 NVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNRVRQPFN--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred CEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHHccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999997555 457999999999988876554333 344444444444432 2222333345566677777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++. ++. + +|. .|+++|+.++.. .....|.+.|...++.+..|..+
T Consensus 293 ~~~-g~~-~-~~~----------------~g~~~~i~~~~~-~~~~~~~~~L~~~gI~v~~~~~~--------------- 337 (367)
T PRK02731 293 AEL-GLE-Y-IPS----------------VGNFILVDFDDG-KDAAEAYQALLKRGVIVRPVAGY--------------- 337 (367)
T ss_pred HHC-CCc-c-CCC----------------CceEEEEECCCC-CCHHHHHHHHHHCCEEEEeCCCC---------------
Confidence 765 332 1 121 367899998532 23456666665567777655321
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
| .+++||||++. ++.+.+++.|+++++
T Consensus 338 -------~-~~~~iRis~~~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 338 -------G-LPNALRITIGTEEENRRFLAALKEFLA 365 (367)
T ss_pred -------C-CCCeEEEecCCHHHHHHHHHHHHHHHh
Confidence 1 14689999985 344555666655554
No 97
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=7.8e-23 Score=213.28 Aligned_cols=281 Identities=17% Similarity=0.186 Sum_probs=190.3
Q ss_pred CCCCchh-HHHHHHHHHhhh----CC---Cc-EEEeCCHH-HHHHHHHHHhccCC---CEEEEcCCCCcchHHHHHHhcc
Q 009523 196 GRYGNPT-TVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLP 262 (532)
Q Consensus 196 ~R~~~p~-~~~Le~~lA~l~----ga---~~-~i~~sSG~-~Ai~~al~all~~G---d~VIv~~~~y~~t~~~~~~~l~ 262 (532)
.+|+.+. ...|++++++++ |. .+ .|++++|+ +|+..++.+++++| |+|++++|+|..... .++
T Consensus 30 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~----~~~ 105 (350)
T TIGR03537 30 SQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYER----GAL 105 (350)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHH----HHH
Confidence 3455543 567888888875 52 22 56666665 99999999999887 699999999987553 345
Q ss_pred cCCcEEEEeCCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc
Q 009523 263 KMGITATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ 332 (532)
Q Consensus 263 ~~Gv~v~~vd~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~ 332 (532)
..|+++..++.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 106 ~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 184 (350)
T TIGR03537 106 FAGGEPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG 184 (350)
T ss_pred hcCCEEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC
Confidence 678888777532 78999998877 6999999999999999998 788999999999999999998753211
Q ss_pred c----cc--ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHH
Q 009523 333 K----AL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQ 403 (532)
Q Consensus 333 ~----~l--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~ 403 (532)
. .. .....+++.|+||.+|.+| .+.|++++++++++.++......+...++....++...+ +.+..+.++
T Consensus 185 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~ 263 (350)
T TIGR03537 185 EPPHSALEVGIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKI 263 (350)
T ss_pred CCCCchhhcCcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHH
Confidence 1 11 1233589999999998765 567899999999998887665555444444333333333 233334445
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~ 483 (532)
..++...+.+.|+++ ++ .+..|. .|.++|+.++.. .....+.+.|...++.+..|..+..
T Consensus 264 l~~~~~~~~~~l~~~-g~-~~~~~~----------------g~~~~~~~~~~~-~~~~~l~~~L~~~gv~v~~g~~f~~- 323 (350)
T TIGR03537 264 FKRKRDLFIEFFNKV-GL-EYLYPD----------------ATFYLWVKVPSG-IDAKDYALRLLENGIVVAPGENFGS- 323 (350)
T ss_pred HHHHHHHHHHHHHHC-CC-cccCCC----------------eEEEEEEECCCC-CCHHHHHHHHHHCCEEEcCchhhCC-
Confidence 556667777777765 22 222221 344688988753 2345666666555777766643210
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 523 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~ 523 (532)
..++++||+++ .+.+++.+
T Consensus 324 --------------------~~~~~~Ri~~~-~~~~~~~~ 342 (350)
T TIGR03537 324 --------------------GEEGYVRVALV-PTLEECEE 342 (350)
T ss_pred --------------------CCCCEEEEEec-CCHHHHHH
Confidence 02578999997 34444333
No 98
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=7e-23 Score=216.21 Aligned_cols=284 Identities=16% Similarity=0.164 Sum_probs=186.9
Q ss_pred CCCCchh-HHHHHHHHHhhh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 196 GRYGNPT-TVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 196 ~R~~~p~-~~~Le~~lA~l~----ga----~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
.+|+.+. ...|++++++++ |. ++.+++++| ++++..++..++++||+|++++|+|.... ..++..|
T Consensus 63 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~----~~~~~~g 138 (385)
T PRK09276 63 HQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYK----IGTIFAG 138 (385)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChH----HHHHHcC
Confidence 3454443 567888888876 32 234666555 59999999999999999999999998744 3344567
Q ss_pred cEEEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 266 ITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 266 v~v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
.++..++. .|++++++.+.+ ++++|++++|+||||.+++. ++|+++|+++|+++|+|++|.....
T Consensus 139 ~~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (385)
T PRK09276 139 GEPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK 217 (385)
T ss_pred CEEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC
Confidence 77776643 257888888876 69999999999999999984 7888889999999999999764321
Q ss_pred ccc---cc--cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHH
Q 009523 332 QKA---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQ 402 (532)
Q Consensus 332 ~~~---l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~ 402 (532)
... +. .+..+++.|+||.+|.+| .+.||+++++++++.++..........+......+...+. .+....+
T Consensus 218 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 296 (385)
T PRK09276 218 PPSFLEVPGAKDVGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRK 296 (385)
T ss_pred CCChhccCCCcCCEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHH
Confidence 111 11 234588999999998766 4578999999999988876554444444444443333332 2222233
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCES 481 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~s 481 (532)
+..++++.+.+.|++. ++ .+..|. .|.++++.+++. .....|.+.+ +..++.+..|..+.
T Consensus 297 ~~~~~~~~l~~~L~~~-~~-~~~~~~----------------~~~~~~v~~~~~-~~~~~l~~~ll~~~gi~v~~g~~f~ 357 (385)
T PRK09276 297 IYQERRDILVEGLRKL-GL-EVEPPK----------------ATFYVWAPVPKG-YTSAEFATLLLDKAGVVVTPGNGFG 357 (385)
T ss_pred HHHHHHHHHHHHHHhC-CC-cccCCC----------------cceEEEEECCCC-CCHHHHHHHHHHhCCEEECCchhhC
Confidence 4456677777888765 33 122121 244578888743 2234455544 33466666664321
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009523 482 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 526 (532)
Q Consensus 482 l~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~ 526 (532)
+ ..++++|||++. +.+++.+.|+
T Consensus 358 ----~-----------------~~~~~~Ris~~~-~~~~l~~~l~ 380 (385)
T PRK09276 358 ----E-----------------YGEGYFRIALTV-PDERIEEAVE 380 (385)
T ss_pred ----C-----------------CCCCeEEEEeCC-CHHHHHHHHH
Confidence 0 124799999996 4444444443
No 99
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.5e-23 Score=218.80 Aligned_cols=280 Identities=17% Similarity=0.225 Sum_probs=193.4
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG-~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.+||+++...+|++++++.+|.+ +.|++++| ++++..++.+++++| |+|+++.|+|.... ..++..|+++..+
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v 126 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTV 126 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEe
Confidence 67889999999999999999963 34555555 599999999999997 89999999997533 4456678888777
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCccc----cc-ccCC
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK----AL-SLGA 339 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~~----~l-~~ga 339 (532)
+. .|++++++++ + ++++|++++||||||.+.+.+++.++++. .++++|+||+|....... .. ....
T Consensus 127 ~~~~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 127 PTLDNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPH 204 (351)
T ss_pred ecCCCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCC
Confidence 54 2688998887 4 69999999999999999998877777653 268999999986543211 11 1234
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l-----~tl~~r~~~~~~~a~~la~~ 414 (532)
-+++.|+||.+|.+| ++.|++++++++++.+++....++ .+...+..+...+ +.+..+++...++++++.+.
T Consensus 205 ~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~~~~~~~--v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~ 281 (351)
T PRK01688 205 LVILRTLSKAFALAG-LRCGFTLANEEVINLLLKVIAPYP--LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAA 281 (351)
T ss_pred EEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHhccCCCC--CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999998555 457899999999998887654333 2332222222233 33445556666778888889
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 494 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~ 494 (532)
|++++.+..+ +|. .++++++.+++ ...+.+.|...++.+..++.+
T Consensus 282 L~~~~~~~~~-~ps----------------~~nfi~~~~~~----~~~l~~~L~~~gi~vr~~~~~-------------- 326 (351)
T PRK01688 282 LKEIPCVEQV-FDS----------------ETNYILARFTA----SSAVFKSLWDQGIILRDQNKQ-------------- 326 (351)
T ss_pred HHhCCCCCeE-CCC----------------CCcEEEEEcCC----HHHHHHHHHHCCeEEEECCCc--------------
Confidence 9887654333 332 36688888752 244555555556666543211
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 495 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 495 ~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
.|. ++++|||+|.+ +..+.|.++|
T Consensus 327 -------~~~-~~~iRis~~~~---~e~~~l~~al 350 (351)
T PRK01688 327 -------PGL-SNCLRITIGTR---EECQRVIDAL 350 (351)
T ss_pred -------CCC-CCeEEEeCCCH---HHHHHHHHhh
Confidence 122 57899999953 3345555554
No 100
>PRK12414 putative aminotransferase; Provisional
Probab=99.92 E-value=1.6e-22 Score=213.67 Aligned_cols=281 Identities=14% Similarity=0.132 Sum_probs=183.5
Q ss_pred hHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 202 TTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga-----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
..+.+++.+++++|. ++++++++|++++..++.+++.+||+|++++|+|...... ++..|.++..++.
T Consensus 71 lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~ 146 (384)
T PRK12414 71 LREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPI----VRLQGATPVAIKLSPE 146 (384)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHH----HHHcCCEEEEEecCcc
Confidence 344455555555675 2477777777999999999999999999999999875433 3445777766653
Q ss_pred ---CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccccc-----cC
Q 009523 274 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS-----LG 338 (532)
Q Consensus 274 ---~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~-----~g 338 (532)
.|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ..++. .+
T Consensus 147 ~~~~d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 225 (384)
T PRK12414 147 DFRVNWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAE 225 (384)
T ss_pred ccccCHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccC
Confidence 268999999876 6999999999999999975 67788889999999999999764321 11111 12
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 415 (532)
..+++.|+||.+|.+| .+.||+++++++++.+...........+...+.++...++. .....+...++++.+.+.|
T Consensus 226 ~~i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 304 (384)
T PRK12414 226 RSVIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLAREL 304 (384)
T ss_pred cEEEEecccccccCcc-ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999998565 56899999999998887765433333344444444443322 1122334456677778888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CHHHHHHHHHHcCCCceeecCCCcccccccCccccccC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 493 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g--~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~ 493 (532)
+++ ++. +..|. .|.++|+.++. +....+.+.+.++..++.+..|..+..
T Consensus 305 ~~~-g~~-~~~~~----------------gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~----------- 355 (384)
T PRK12414 305 AGS-RFE-LLPSE----------------GSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYT----------- 355 (384)
T ss_pred HhC-CCe-ecCCC----------------cceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcC-----------
Confidence 875 232 22121 34466767753 111222222445556788777754321
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009523 494 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 526 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~ 526 (532)
.+..+++|||+++. +.+++.+.++
T Consensus 356 --------~~~~~~~iRis~~~-~~~~~~~~~~ 379 (384)
T PRK12414 356 --------DGTDTGLIRLSFSK-DDATLVEGAR 379 (384)
T ss_pred --------CCCCCCEEEEEecC-CHHHHHHHHH
Confidence 01225799999997 4454444443
No 101
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=6.4e-23 Score=216.79 Aligned_cols=281 Identities=19% Similarity=0.182 Sum_probs=189.0
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
....|++++|+++ |. ++.++++++++|+..++.+++++||+|++++|+|.+.... +...|.++..++.
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~ 143 (388)
T PRK07337 68 GLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHF----VAAAEGRPVLVPS 143 (388)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHH----HHHcCCEEEEeec
Confidence 3677888888876 32 3456666667999999999999999999999999986543 3445666666643
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccccccCC
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSLGA 339 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~~ga 339 (532)
.|++++++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ......+.
T Consensus 144 ~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 222 (388)
T PRK07337 144 GPAERFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGD 222 (388)
T ss_pred CCccCCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccC
Confidence 268999999887 6999999999999999997 56788889999999999999764321 11222333
Q ss_pred c-EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHH
Q 009523 340 D-LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAK 413 (532)
Q Consensus 340 D-ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~ 413 (532)
+ +++.|+||.+|.+| .+.||+++++++++.+.......+...+.....++...+. .+....++..++++.+.+
T Consensus 223 ~vi~~~S~SK~~~~~G-~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~ 301 (388)
T PRK07337 223 DVITINSFSKYFNMTG-WRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVP 301 (388)
T ss_pred CEEEEEechhhcCCch-hheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHH
Confidence 3 56889999998666 4589999999999988876655554455554444443332 232333344466677778
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHH-cCCCceeecCCCcccccccCcc
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~l~~-L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
.|+++ ++.....|. .|.++|++++.. ......|.+. ++..++.+..|..+.. +
T Consensus 302 ~L~~~-~~~~~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~---~-- 359 (388)
T PRK07337 302 ALESL-GFKVPVMPD----------------GAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP---H-- 359 (388)
T ss_pred HHHhc-CCccccCCC----------------eeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---C--
Confidence 88775 221111221 467889998631 1123445544 4455777777654321 0
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 526 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~ 526 (532)
-.++++||+++. +.+++.+.++
T Consensus 360 ---------------~~~~~~Ri~~~~-~~~~l~~~l~ 381 (388)
T PRK07337 360 ---------------APRDYIRLSYAT-SMSRLEEAVA 381 (388)
T ss_pred ---------------CCCCEEEEEecC-CHHHHHHHHH
Confidence 025799999997 4454444443
No 102
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=1.1e-22 Score=216.78 Aligned_cols=287 Identities=13% Similarity=0.142 Sum_probs=188.9
Q ss_pred CCCCch-hHHHHHHHHHhhhCC--------------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHh
Q 009523 196 GRYGNP-TTVVVEEKMSALEGA--------------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV 260 (532)
Q Consensus 196 ~R~~~p-~~~~Le~~lA~l~ga--------------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~ 260 (532)
.+|+++ ....|+++||++++. ++.++++++++++..++.+++++||+|+++.|+|.... ..
T Consensus 69 ~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~----~~ 144 (412)
T PTZ00433 69 NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYE----TV 144 (412)
T ss_pred CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHH----HH
Confidence 456655 477899999998751 34555555569999999999999999999999998754 34
Q ss_pred cccCCcEEEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 261 LPKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 261 l~~~Gv~v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
++..|+++..++. .|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....
T Consensus 145 ~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 145 CKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HHHcCCEEEEEecCccccCcCCHHHHHHHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 5667888777653 268899998877 6999999999999999987 6677888999999999999987532
Q ss_pred cc----cc---cc-cCCcEEEECCccccCCCCCcEEEEEEe--C----hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-
Q 009523 331 NQ----KA---LS-LGADLVLHSATKFIGGHNDVLAGSISG--S----GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 395 (532)
Q Consensus 331 ~~----~~---l~-~gaDivv~S~sK~lgg~gd~~gG~lv~--~----~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~- 395 (532)
.. .+ +. ....+++.|+||.++.+| .+.||+++ + +++++.++..... ....+...+.++...+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKRLGML-VCGPCSVVQAALGEALLN 301 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHHHhhc-cCCCChHHHHHHHHHHhc
Confidence 11 11 11 112478899999998776 56788886 2 3566666654432 22344544444333332
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHc
Q 009523 396 ----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL 467 (532)
Q Consensus 396 ----tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~l~~L 467 (532)
.+....++..++.+.+.+.|+++.++. +..|. .|.++|+.++.. ......|.+.+
T Consensus 302 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~----------------gg~f~~~~l~~~~~~~~~~~~~~~~~l 364 (412)
T PTZ00433 302 TPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPR----------------GSMFLMSRLDLEKFRDIKSDVEFYEKL 364 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCC----------------eeEEEEEEechhhcCCCCCHHHHHHHH
Confidence 233333445566777778887654331 22221 466789888631 11234566665
Q ss_pred C-CCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009523 468 K-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 529 (532)
Q Consensus 468 ~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL 529 (532)
. ..++.+..|..+. .++++||+++.. +.++.++.|.+++
T Consensus 365 l~~~gV~v~pg~~f~-----------------------~~~~iRis~~~~~e~l~~al~~l~~~~ 406 (412)
T PTZ00433 365 LEEENVQVLPGEIFH-----------------------MPGFTRLTISRPVEVLREAVERIKAFC 406 (412)
T ss_pred HHhcCEEEeCccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 3 4577777664421 146899999964 2233344444444
No 103
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=1.7e-22 Score=210.14 Aligned_cols=282 Identities=18% Similarity=0.206 Sum_probs=202.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+...+++++++++++.++.+++++|++++..++.+++++||+|+++++.|..... .++..|+++..++..|+++|
T Consensus 60 ~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l 135 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLID----GCRLSGARVRRYRHNDVEHL 135 (360)
T ss_pred cHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHH----HHHhcCCceEEecCCCHHHH
Confidence 36788899999999998889999999988887888889999999999999987553 34456788888887899999
Q ss_pred HHhhcCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-cc--c------c-ccCCcEEEECC
Q 009523 280 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QK--A------L-SLGADLVLHSA 346 (532)
Q Consensus 280 e~al~~~---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~--~------l-~~gaDivv~S~ 346 (532)
++.+++. ++++|++++++|++|.+.|+++|.++|+++|+++|+|+++..+.. .. . . ..+.|+++.|+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 215 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTL 215 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEec
Confidence 9988642 479999999999999999999999999999999999999864321 11 0 1 23678999999
Q ss_pred ccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009523 347 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 347 sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v 421 (532)
||++++. ||++++++++++.++..... .+...++.....+...++ ......++..++.+++.+.|++++ +
T Consensus 216 sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~ 290 (360)
T TIGR00858 216 SKALGSY----GAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-F 290 (360)
T ss_pred hhhhhcc----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 9999974 48999999888887653322 233344444333333443 223345666678888888887753 2
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHh
Q 009523 422 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 501 (532)
Q Consensus 422 ~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~ 501 (532)
. + +| ..++++++.++.. .....|.+.|...++.+..+..... +
T Consensus 291 ~-~-~~----------------~~~~~~~~~~~~~-~~~~~~~~~l~~~gI~v~~~~~~~~---~--------------- 333 (360)
T TIGR00858 291 T-L-MP----------------SCTPIVPVIIGDN-ASALALAEELQQQGIFVGAIRPPTV---P--------------- 333 (360)
T ss_pred c-c-CC----------------CCCCEEEEEeCCH-HHHHHHHHHHHHCCeeEeeeCCCCC---C---------------
Confidence 1 1 11 1366899988642 3455677777666776665422110 0
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 502 YGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 502 ~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
-..+.||+|++..+.++.++.+.++|
T Consensus 334 --~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 334 --AGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred --CCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 01458999999876666666666655
No 104
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=1.7e-23 Score=222.28 Aligned_cols=302 Identities=17% Similarity=0.175 Sum_probs=197.4
Q ss_pred CchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 199 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all----~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.....+.+++.+++++|.+ +++++++|+++++.++.++. ++||+|+++.++|++....+. .++..|++++.++
T Consensus 45 ~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~ 123 (402)
T TIGR02006 45 AEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLP 123 (402)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEc
Confidence 3456788899999999974 46666677799998877653 689999999999988766553 3456688888886
Q ss_pred CC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECC
Q 009523 273 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 346 (532)
Q Consensus 273 ~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~ 346 (532)
.+ |++++++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+. +.+....++|+++.|+
T Consensus 124 ~~~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~ 202 (402)
T TIGR02006 124 PKSNGLIDLEELKAAIRD-DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISG 202 (402)
T ss_pred cCCCCcCCHHHHHHhcCC-CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEeh
Confidence 43 79999999987 69999999999999999999999999999999999999987653 3455567899999999
Q ss_pred ccccCCCCCcEEEEEEeChHHHHHHHHHh-------hhcCCCccHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHHHH
Q 009523 347 TKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 347 sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~~~~~~a~l~l~~l~tl----~~r~~~~~~~a~~la~~L 415 (532)
+|++|++| .|+++.+++....+.... ....++.+......+..+++.+ ..+.++..+.+.++.+.|
T Consensus 203 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l 279 (402)
T TIGR02006 203 HKIYGPKG---IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGI 279 (402)
T ss_pred hhhcCCCc---eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99988766 455555543222221110 1112233333333333344333 233344445566666677
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++.+.+... .+. +. ..++++.|.+++. ....++..++ ++.++.|..++ +.. .-+
T Consensus 280 ~~~~~v~~~-~~~-~~------------~~p~~~~v~f~~~--~~~~~~~~l~--~i~v~~G~~c~----~~~----~~~ 333 (402)
T TIGR02006 280 KSIEEVYLN-GDL-EH------------RVPGNLNVSFNYV--EGESLIMALK--DLAVSSGSACT----SAS----LEP 333 (402)
T ss_pred hcCCCEEEe-CCc-cc------------cCCCeEEEEEeCc--CHHHHHHhcC--CEEEechhhcC----CCC----CCc
Confidence 666665322 111 00 0122223334321 1234444554 67778775532 110 112
Q ss_pred HHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 496 QSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 496 ~~~~~~~gi~----~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
......+|+. .+.||+|++..++++.++.+.++|++
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 2334566764 47999999998877777777777653
No 105
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.92 E-value=8.9e-23 Score=215.69 Aligned_cols=278 Identities=15% Similarity=0.125 Sum_probs=182.3
Q ss_pred hhHHHHHHHHHhhh----C--C-Cc-EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 201 PTTVVVEEKMSALE----G--A-ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 201 p~~~~Le~~lA~l~----g--a-~~-~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+....|++++|+++ | . .+ .|++++|+ +|+..++.+++.+||+|++++|+|.... ..++..|.++..+
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v 143 (388)
T PRK07366 68 HGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHA----GGVYLAGGQIYPM 143 (388)
T ss_pred CCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHhcCCEEEEE
Confidence 44567888888876 3 2 23 46666665 9999999999999999999999998754 3445568887776
Q ss_pred CCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCcc------ccc
Q 009523 272 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ------KAL 335 (532)
Q Consensus 272 d~~-------dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~~------~~l 335 (532)
+.+ |++++++.+.+ ++++|++++|+||||.+++. ++|+++|+++|++||+||+|...... ...
T Consensus 144 ~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 222 (388)
T PRK07366 144 PLRAENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSIL 222 (388)
T ss_pred ECCCccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChh
Confidence 532 46677777765 68999999999999999985 46777899999999999997654211 111
Q ss_pred cc----CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHHHHHHHH
Q 009523 336 SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 407 (532)
Q Consensus 336 ~~----gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l----~tl~~r~~~~~~~ 407 (532)
.. ...+++.|+||.+|.+| .+.||+++++++++.+.......+....+.....+...+ +.+....+...++
T Consensus 223 ~~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~ 301 (388)
T PRK07366 223 QADPEKSVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQR 301 (388)
T ss_pred hCCCCcccEEEEeecccccCCcc-hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 11 12478899999998666 568999999999998887665444332221111112222 2233334444566
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHc-CCCceeecCCCccccccc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDAL-KIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L-~~~~i~vs~G~~~sl~~~ 485 (532)
.+.+.+.|+++ ++ .+..|. .|.++|+++++.. .....|.+.+ +..++.+..|..+.
T Consensus 302 r~~l~~~L~~~-~~-~~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---- 359 (388)
T PRK07366 302 RDAFINALHQI-GW-PVPLPE----------------ATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFG---- 359 (388)
T ss_pred HHHHHHHHHHC-CC-cccCCC----------------eeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhC----
Confidence 67777888765 22 122222 4778899987421 1234455444 45577777764431
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHH
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKAD 524 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~d 524 (532)
+...++|||+++. +.+++.+.
T Consensus 360 -----------------~~~~~~iRi~~~~-~~~~l~~~ 380 (388)
T PRK07366 360 -----------------KSGEGYVRFALVH-DPDILEEA 380 (388)
T ss_pred -----------------cCCCCeEEEEecC-CHHHHHHH
Confidence 0124789999985 44443333
No 106
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.3e-23 Score=216.62 Aligned_cols=278 Identities=15% Similarity=0.200 Sum_probs=191.1
Q ss_pred CCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 197 RYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
+|+.+...+|++++|++++.+ +.+++++| ++++..++.+++++||+|++++|+|+... ..+...|.++..++.
T Consensus 60 ~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~ 135 (359)
T PRK03158 60 LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYR----HNAIIEGAEVREVPLK 135 (359)
T ss_pred cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEEecC
Confidence 456667889999999999863 34445445 59999999999999999999999998744 334456777777754
Q ss_pred ---CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCcc----ccc----ccCCc
Q 009523 274 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLGAD 340 (532)
Q Consensus 274 ---~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~----~~l----~~gaD 340 (532)
.|++++++++++ ++++|++++|+||||.+.+.++|.++++. +|+++|+||+|...... ... ..+..
T Consensus 136 ~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 136 DGGHDLEAMLKAIDE-QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred CCCcCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 378999988877 79999999999999999999999998876 59999999997643211 111 23456
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHh
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~ 417 (532)
+++.|+||.+|.+| ++.||+++++++++.+......+ ..+......+...++. +....+...++.+.+.+.|++
T Consensus 215 i~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 291 (359)
T PRK03158 215 IVLRTFSKAYGLAA-LRVGYGIASEELIEKLNIARPPF--NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE 291 (359)
T ss_pred EEEEechHhhcCcc-hhhehhcCCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999998665 46799999999999887765433 2455555555444432 222223334555666677776
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
+ ++. + +|. .|.++++.++.+ ...+.+.|...++.+..|..+
T Consensus 292 ~-~~~-~-~~~----------------~g~~i~~~~~~~---~~~~~~~l~~~gv~v~~g~~f----------------- 332 (359)
T PRK03158 292 Y-GLF-Y-YPS----------------QTNFIFVDTGRD---ANELFEALLKKGYIVRSGAAL----------------- 332 (359)
T ss_pred C-CCe-e-CCC----------------cCcEEEEECCCC---HHHHHHHHHHCCeEEeeCCCC-----------------
Confidence 5 332 2 222 356888887532 334555554457777766432
Q ss_pred HHHhcCCCCCeEEEEecCC-CHHHHHHHHHH
Q 009523 498 ERLKYGIMDNLVRFSFGVE-DFEDLKADVLQ 527 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~ 527 (532)
| .+++|||+++.. +.+.+++.|++
T Consensus 333 -----~-~~~~iRi~~~~~~~~~~l~~al~~ 357 (359)
T PRK03158 333 -----G-FPTGVRITIGLKEQNDKIIELLKE 357 (359)
T ss_pred -----C-CCCeEEEecCCHHHHHHHHHHHHH
Confidence 1 146899999953 34555555544
No 107
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=8e-23 Score=216.69 Aligned_cols=277 Identities=18% Similarity=0.192 Sum_probs=182.9
Q ss_pred CCCchh-HHHHHHHHHhhh----CC-----CcEEEeCCH-HHHHHHHHHHhccC---CCEEEEcCCCCcchHHHHHHhcc
Q 009523 197 RYGNPT-TVVVEEKMSALE----GA-----ESTVIMASG-MSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLP 262 (532)
Q Consensus 197 R~~~p~-~~~Le~~lA~l~----ga-----~~~i~~sSG-~~Ai~~al~all~~---Gd~VIv~~~~y~~t~~~~~~~l~ 262 (532)
+|+.+. ...|++.||+++ |. ++.|++++| ++++..++.+++++ ||.|+++.|.|.... ..+.
T Consensus 60 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~----~~~~ 135 (396)
T PRK09147 60 SYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYE----GAAL 135 (396)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchH----HHHH
Confidence 344332 456777777754 52 235655555 59999999999999 999999999998744 3445
Q ss_pred cCCcEEEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc
Q 009523 263 KMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ 332 (532)
Q Consensus 263 ~~Gv~v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~ 332 (532)
..|+++..++. .|++++++.+.+ ++++|++++|+||||.+++ +++|+++|++|+++||+||+|......
T Consensus 136 ~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 214 (396)
T PRK09147 136 LAGAEPYFLNCDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFD 214 (396)
T ss_pred hcCCEEEEeccCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccC
Confidence 56888877753 267889887766 6999999999999999997 567888889999999999998754211
Q ss_pred c---c---c----cc-----CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH--
Q 009523 333 K---A---L----SL-----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-- 395 (532)
Q Consensus 333 ~---~---l----~~-----gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-- 395 (532)
. + + .. ...+++.|+||.++.+| ++.||+++++++++.+.......+...++.....+...+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~ 293 (396)
T PRK09147 215 EAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDE 293 (396)
T ss_pred CCCCCchhhhhccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcch
Confidence 1 0 1 11 23489999999887776 5689999999999888776654444555554444333332
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCcee
Q 009523 396 -TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIA 473 (532)
Q Consensus 396 -tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~ 473 (532)
.+....+...++.+.+.+.|.++ + .+..| ..|.++|++++.+ ...|.+.+ +..++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~p----------------~~g~f~~~~~~~~---~~~~~~~ll~~~gv~ 351 (396)
T PRK09147 294 AHVRENRALYREKFDAVTPILAPV--L-DVQLP----------------DAGFYLWAKVPGD---DTEFARRLYADYNVT 351 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh--c-CCCCC----------------CeeEEEEEECCCC---HHHHHHHHHHhCCEE
Confidence 23333344445566666677653 1 11122 1477899998722 23444444 345777
Q ss_pred ecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009523 474 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 516 (532)
Q Consensus 474 vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e 516 (532)
+..|..+..-.. . ..-..+++||+++..
T Consensus 352 v~pg~~f~~~~~-~--------------~~~~~~~iRi~~~~~ 379 (396)
T PRK09147 352 VLPGSYLAREAH-G--------------VNPGAGRVRIALVAP 379 (396)
T ss_pred EeCCcccccccc-C--------------CCCCCCeEEEEecCC
Confidence 777755421000 0 001257999999974
No 108
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=1.4e-22 Score=214.33 Aligned_cols=284 Identities=15% Similarity=0.096 Sum_probs=189.2
Q ss_pred CCCCC-chhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC
Q 009523 195 YGRYG-NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 195 Y~R~~-~p~~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
+.+|+ .+....|++++|+++ |. + +.+++++|++++..++.+++++||+|++++|+|..... .++..
T Consensus 63 ~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~ 138 (389)
T PRK08068 63 NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS----GVALA 138 (389)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhc
Confidence 34553 455778999999886 42 3 34555566699999999999999999999999987543 34556
Q ss_pred CcEEEEeCCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCcc--
Q 009523 265 GITATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-- 332 (532)
Q Consensus 265 Gv~v~~vd~~-------dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~~-- 332 (532)
|+++..++.+ |++++++++++ ++++|++++|+||||.+++. ++|+++|+++++++|+||+|......
T Consensus 139 g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~ 217 (389)
T PRK08068 139 RAQFETMPLIAENNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ 217 (389)
T ss_pred CCEEEEeecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC
Confidence 8877776542 57888888876 69999999999999999986 57777899999999999997542111
Q ss_pred c--c-cc----cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHH
Q 009523 333 K--A-LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRV 401 (532)
Q Consensus 333 ~--~-l~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l----~tl~~r~ 401 (532)
. + .. ....+++.|+||.+|.+| .+.||+++++++++.+............+..+..+...+ +.+....
T Consensus 218 ~~~s~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 296 (389)
T PRK08068 218 KPVSFLQTPGAKDVGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELV 296 (389)
T ss_pred CCcChhhCCCccCCEEEEecchhccCCcc-ceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 1 1 11 124589999999998665 568999999999998887665544333332233222322 2233444
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcc
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCE 480 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~ 480 (532)
++..++++.+.+.|+++ ++ .+..|. .|.++|+.+++. .....|.+.+. ..++.+..|..+
T Consensus 297 ~~~~~~r~~~~~~L~~~-g~-~~~~~~----------------g~~~~~v~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f 357 (389)
T PRK08068 297 ARYESRRNAFISACREI-GW-EVDAPK----------------GSFFAWMPVPKG-YTSEQFADLLLEKAHVAVAPGNGF 357 (389)
T ss_pred HHHHHHHHHHHHHHHHC-CC-cccCCC----------------eeEEEEEECCCC-CCHHHHHHHHHHhCCEEEecchHh
Confidence 55556677777888775 22 122111 244579998753 23345655554 347777666432
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
.. ..+++|||+++.+ .+.+.+.+
T Consensus 358 ~~---------------------~~~~~iRi~~~~~-~~~l~~al 380 (389)
T PRK08068 358 GE---------------------HGEGYVRVGLLTD-EERLREAV 380 (389)
T ss_pred Cc---------------------cCCCeEEEEEcCC-HHHHHHHH
Confidence 10 1257999999964 34444443
No 109
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=1.5e-22 Score=216.95 Aligned_cols=277 Identities=17% Similarity=0.167 Sum_probs=182.2
Q ss_pred hHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga--------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+|+++++++++. +++++++++++|+.+++.+++++||+|++++|.|+.... .....|+++..++.
T Consensus 95 G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~~~~~~~ 170 (430)
T PLN00145 95 GLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA----RAVFSGLEVRHFDL 170 (430)
T ss_pred cCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEeeC
Confidence 467888889888742 456667777799999999999999999999999987432 33445777777653
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccc---c
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL---S 336 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l---~ 336 (532)
.|+++|++++++ +++++++++|+||||.+++ +++|+++|+++|+++|+|++|..... ..++ .
T Consensus 171 ~~~~~~~~d~~~l~~~~~~-~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~ 249 (430)
T PLN00145 171 LPERGWEVDLEGVEALADE-NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG 249 (430)
T ss_pred CcccCCcCCHHHHHHHhCc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc
Confidence 278999998887 6999999999999999998 67888889999999999999765321 1111 1
Q ss_pred -cCCcEEEECCccccCCCCCcEEEEEEe--ChHHHH------HHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHH
Q 009523 337 -LGADLVLHSATKFIGGHNDVLAGSISG--SGKLVT------QIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQ 402 (532)
Q Consensus 337 -~gaDivv~S~sK~lgg~gd~~gG~lv~--~~~li~------~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~~ 402 (532)
....+++.|+||.++.+| .+.||+++ ++.+++ .++.... .....+.+.++++...++ .+...++
T Consensus 250 ~~~~vi~~~S~SK~~~~pG-~RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~ 327 (430)
T PLN00145 250 EVAPVLTLGSISKRWVVPG-WRLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLG 327 (430)
T ss_pred ccCcEEEEeccccccCCCC-eeEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 124589999999988877 46788886 334433 2333322 222334444444333333 2344445
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHH-HcCCCceeecCC
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFID-ALKIPYIAPSFG 477 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~l~-~L~~~~i~vs~G 477 (532)
+..++++.+.+.|++++++..+..|. .|..+++.++.. ......|+. .++..++.+..|
T Consensus 328 ~~~~~~~~~~~~L~~~~g~~~~~~P~----------------ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG 391 (430)
T PLN00145 328 LLKETADICYEKIKEIKCITCPHKPE----------------GSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPG 391 (430)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCcCCC----------------eeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 55667777888887766543222332 466778887521 112233443 333445666655
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
..+ | .++++|||++. +.+++.+.+
T Consensus 392 ~~f----------------------g-~~~~lRis~~~-~~~~l~~al 415 (430)
T PLN00145 392 SAL----------------------G-MKNWLRITFAI-DPPSLEDGL 415 (430)
T ss_pred ccc----------------------C-CCCeEEEEeCC-CHHHHHHHH
Confidence 432 2 14799999996 444444433
No 110
>PLN02483 serine palmitoyltransferase
Probab=99.92 E-value=2.7e-22 Score=217.97 Aligned_cols=285 Identities=16% Similarity=0.181 Sum_probs=198.3
Q ss_pred CC-chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCH
Q 009523 198 YG-NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 276 (532)
Q Consensus 198 ~~-~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dl 276 (532)
|+ .+..++||+++|+++|.++++++++|+.++..++.+++++||+|+++++.|.+... .++..|+++..++.+|+
T Consensus 142 ~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~d~ 217 (489)
T PLN02483 142 GGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHNTP 217 (489)
T ss_pred cCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCCCH
Confidence 54 67899999999999999999999999998888899999999999999999998653 34567999999988888
Q ss_pred HHHHHhhcC------CCe-----e-EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc----------ccc
Q 009523 277 EGLEAALNN------NNV-----S-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----------QKA 334 (532)
Q Consensus 277 e~Le~al~~------~~t-----k-lV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~----------~~~ 334 (532)
+++++.+++ .++ + +|+++...|++|.+.++++|.++|+++|+++|+||++..+.. ...
T Consensus 218 ~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v 297 (489)
T PLN02483 218 SHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGV 297 (489)
T ss_pred HHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCC
Confidence 888776642 122 4 677777889999999999999999999999999999864321 011
Q ss_pred cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---------HHHHHH
Q 009523 335 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---------HLRVQQ 403 (532)
Q Consensus 335 l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl---------~~r~~~ 403 (532)
...++|+++.|+||.+|+. ||++++++++++.++.... .++..+++..+..+..+++.+ ..+.++
T Consensus 298 ~~~~~dI~~~SfSKs~g~~----GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~ 373 (489)
T PLN02483 298 DPADVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQ 373 (489)
T ss_pred CcccCcEEEEecchhcccC----ceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHH
Confidence 1235799999999999865 5999999999999886532 234444555444444455422 235566
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~ 483 (532)
..++.+.+.+.|+++ ++ .+..+. .+.++++.+.. ......|.+.|...++.+...+.
T Consensus 374 l~~~~~~l~~~L~~~-G~-~v~~~~----------------~sp~~~l~l~~-~~~~~~~~~~Ll~~GI~v~~~~f---- 430 (489)
T PLN02483 374 IRENSNFFRSELQKM-GF-EVLGDN----------------DSPVMPIMLYN-PAKIPAFSRECLKQNVAVVVVGF---- 430 (489)
T ss_pred HHHHHHHHHHHHHHC-CC-cccCCC----------------CCCEEEEEECC-HHHHHHHHHHHHHCCcEEeeeCC----
Confidence 778888888989875 32 121110 23466776643 23445566666555666653211
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
|+. ....+.+||+++...+++.++.+.++|
T Consensus 431 --p~~--------------p~~~~~vRi~isa~~t~edId~~l~~L 460 (489)
T PLN02483 431 --PAT--------------PLLLARARICISASHSREDLIKALEVI 460 (489)
T ss_pred --CCC--------------CCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 110 012367999998754444344333333
No 111
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9e-23 Score=214.78 Aligned_cols=282 Identities=15% Similarity=0.199 Sum_probs=190.4
Q ss_pred CCCCchhHHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCC-EEEEcCCCCcchHHHHHHhcccC
Q 009523 196 GRYGNPTTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGG-HIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~g--------a-~~~i~~sSG~-~Ai~~al~all~~Gd-~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
.+|+.+....|+++||++++ . .+.|++++|+ +++..++.+++.+|| +|+++.|+|.... ..++..
T Consensus 61 ~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~----~~~~~~ 136 (374)
T PRK02610 61 NRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYG----ILAQTL 136 (374)
T ss_pred cCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH----HHHHHc
Confidence 45666677889999999987 2 2345555555 899888888888886 8999999998644 345667
Q ss_pred CcEEEEeCC------CCHHHHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHh-CCCEEEEECCCCCCCccc-
Q 009523 265 GITATVIDP------ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQK- 333 (532)
Q Consensus 265 Gv~v~~vd~------~dle~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~-~gi~lIvDet~a~~~~~~- 333 (532)
|+++..++. .|+++|++++++ .++++|++++|+||||.+++.+++.++++- +++++|+||+|.......
T Consensus 137 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~ 216 (374)
T PRK02610 137 GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL 216 (374)
T ss_pred CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch
Confidence 888877753 268899988863 479999999999999999998777666542 489999999986542111
Q ss_pred --ccc-cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHH
Q 009523 334 --ALS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNST 407 (532)
Q Consensus 334 --~l~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~ 407 (532)
.+. ...-+++.|+||.+|.+| ++.||+++++++++.+......++ .+.....++...++ .+..++++..+.
T Consensus 217 ~~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 217 VGELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEKVRLPYN--LPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred HHHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 111 122488999999998776 568999999999998877653332 34444444333332 333344444555
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
+..+.+.|+.++.+. + +|. .|.++|++++.+ .....|.+.+...++.+..
T Consensus 294 r~~l~~~L~~~~~~~-~-~p~----------------~g~f~~~~l~~~-~~~~~~~~~l~~~gi~v~~----------- 343 (374)
T PRK02610 294 RDRLYQALQELPQLR-V-WPS----------------AANFLYLRLSQD-AALAALHQALKAQGTLVRH----------- 343 (374)
T ss_pred HHHHHHHHHhCCCcE-e-CCC----------------cceEEEEeCCCC-CCHHHHHHHHHHCCEEEEe-----------
Confidence 666777787765542 2 232 467899998743 2345566666544544421
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALHA 531 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~AL~~ 531 (532)
.++++|||++.+ +.++.++.|.+++..
T Consensus 344 -----------------~~~~lRls~~~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 344 -----------------TGGGLRITIGTPEENQRTLERLQAALTQ 371 (374)
T ss_pred -----------------CCCeEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 136899999953 345566666666654
No 112
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=1.1e-22 Score=214.80 Aligned_cols=275 Identities=15% Similarity=0.125 Sum_probs=186.6
Q ss_pred hhHHHHHHHHHhhhC----C---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 201 PTTVVVEEKMSALEG----A---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~g----a---~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+...+|+++++++++ . .+.|++++| ++|+..++.+++++||+|+++.|+|..... .++..|+++..++
T Consensus 67 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 142 (386)
T PRK07550 67 EGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKM----WLDMLGIRPVYLP 142 (386)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEe
Confidence 345667777776653 2 244555555 589999999999999999999999987543 3456788887776
Q ss_pred CC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----ccccc-
Q 009523 273 PA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS- 336 (532)
Q Consensus 273 ~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~- 336 (532)
.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.... .....
T Consensus 143 ~~~~~~~~~~~~~l~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~ 221 (386)
T PRK07550 143 CDEGPGLLPDPAAAEALITP-RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFAD 221 (386)
T ss_pred cCCCcCCCCCHHHHHHHhcc-cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhC
Confidence 42 67889999987 6999999999999999997 67899999999999999999764321 11111
Q ss_pred --c-CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH---HH-HHHHHHHHH
Q 009523 337 --L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH---LR-VQQQNSTAL 409 (532)
Q Consensus 337 --~-gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~---~r-~~~~~~~a~ 409 (532)
. ...+++.|+||.+|.+| ...|++++++++++.+.......+...+...++.+...++.+. .+ .+...++.+
T Consensus 222 ~~~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK07550 222 PDWDDTLVHLYSFSKSYALTG-HRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRD 300 (386)
T ss_pred CCccccEEEEecchhhccCcc-cceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1 13478999999998554 4689999999998888876655554455555554444443322 22 233446667
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCcc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~ 488 (532)
.+.+.|.+++.+. + .|. .|.++|+.++........+.+.| +..++.+..|..+. +
T Consensus 301 ~l~~~L~~~~~~~-~-~~~----------------g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~----~-- 356 (386)
T PRK07550 301 AFRAVFARLPGWE-L-LAS----------------GAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFG----P-- 356 (386)
T ss_pred HHHHHHHhCCCce-e-CCC----------------ceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhC----C--
Confidence 7778887764431 1 111 35678888864112344565554 44577777765431 0
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 520 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~d 520 (532)
..+++|||+++..+.++
T Consensus 357 ---------------~~~~~iRis~~~~~~~~ 373 (386)
T PRK07550 357 ---------------GQEGYLRLAFANADVAG 373 (386)
T ss_pred ---------------CCCCEEEEEeecCCHHH
Confidence 12478999999755444
No 113
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=1.4e-22 Score=209.34 Aligned_cols=282 Identities=20% Similarity=0.177 Sum_probs=198.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----C
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----~ 274 (532)
+.+..+++++.+++++|.++.+++++|++|+..++.+++++||+|+++++.|....... ......|+++..++. .
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 108 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKL 108 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcC
Confidence 57889999999999999778899999999999999999999999999999987643211 112236888877765 4
Q ss_pred CHHHHHHhhcC------CCeeEEEEeCCCCCCCcc---cCHHHHHHHHHhCCCEEEEECCCCC------CCcccccccCC
Q 009523 275 DMEGLEAALNN------NNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGA 339 (532)
Q Consensus 275 dle~Le~al~~------~~tklV~lesP~NptG~v---~dl~~I~~la~~~gi~lIvDet~a~------~~~~~~l~~ga 339 (532)
|+++|++++++ .++++|++++|+|| |.+ .++++|+++|+++|+++|+|+++.. +........++
T Consensus 109 d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~ 187 (338)
T cd06502 109 TPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGV 187 (338)
T ss_pred CHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcC
Confidence 78999999864 25899999999998 544 3567899999999999999998531 11222334578
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKT--LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~~~~~a~l~l~~l~t--l~~r~~~~~~~a~~la~~L 415 (532)
|+++.|+||+++.++ |+++++++++++.++......+.. .++..++.+...++. ...+.++..++++++.+.|
T Consensus 188 d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L 264 (338)
T cd06502 188 DSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEAL 264 (338)
T ss_pred CEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999764 556678888988887765444332 344555555555544 3445567777888899999
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC---CCceeecCCCcccccccCcccccc
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK---IPYIAPSFGGCESIVDQPAIMSYW 492 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~---~~~i~vs~G~~~sl~~~pa~~s~~ 492 (532)
++++. . .+|. .++++.+.++++......+.+.+. ..++.+. +.
T Consensus 265 ~~~~~--~-~~~~----------------~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~----------~~----- 310 (338)
T cd06502 265 EELGG--L-ESEV----------------QTNIVLLDPVEANAVFVELSKEAIERRGEGVLFY----------AW----- 310 (338)
T ss_pred HhcCC--C-cccc----------------cCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEE----------ec-----
Confidence 87643 1 1221 356777777543344445554432 1222211 10
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 493 DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 493 ~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+.||++++...+++.++.+.++++.
T Consensus 311 ------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 311 ------------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ------------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 126899999998777777887777764
No 114
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=3.5e-22 Score=209.97 Aligned_cols=287 Identities=19% Similarity=0.163 Sum_probs=203.9
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCH
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 276 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dl 276 (532)
++..+..++++++++++++.++.+++++|++++..++..++++||+|+++++.|+.+... +...|.++..++..|+
T Consensus 80 ~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~ 155 (385)
T PRK05958 80 TGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDG----ARLSRARVRRYPHNDV 155 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHH----HHhcCCceEEeCCCCH
Confidence 345678899999999999988899999999888888888899999999999999876533 3445788888888899
Q ss_pred HHHHHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-c--------ccc-cCCcEEEE
Q 009523 277 EGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALS-LGADLVLH 344 (532)
Q Consensus 277 e~Le~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~-~--------~l~-~gaDivv~ 344 (532)
+++++.+++. +++++++++++|++|.+.++++|+++|+++|+++|+|++++.+... . .+. ...++++.
T Consensus 156 ~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~ 235 (385)
T PRK05958 156 DALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVG 235 (385)
T ss_pred HHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEE
Confidence 9999998652 3778888899999999999999999999999999999998643211 0 111 23458899
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCC
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p 419 (532)
|+||++++. ||++++++++++.+..... ..+...++..+..+...++.+ ....++..++.+++.+.|++.+
T Consensus 236 s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 311 (385)
T PRK05958 236 TLGKALGSS----GAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG 311 (385)
T ss_pred echhhcccC----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999864 4888888888877754322 223334555544444455433 2344556677778888887642
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHH
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
+. + ++ ..|++++|.+++ ......|.+.|...++.+..++... .+
T Consensus 312 -~~-~-~~----------------~~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~---~~------------- 355 (385)
T PRK05958 312 -FQ-L-MD----------------SQSAIQPLIVGD-NERALALAAALQEQGFWVGAIRPPT---VP------------- 355 (385)
T ss_pred -CC-c-CC----------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCceEecccCCC---CC-------------
Confidence 21 1 11 136788998864 2445667777766677665432110 00
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 500 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
-..+.||||++....++.++.+.++|++
T Consensus 356 ----~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 356 ----AGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred ----CCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 0246899999976666666777766654
No 115
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.92 E-value=6.4e-23 Score=212.34 Aligned_cols=277 Identities=18% Similarity=0.220 Sum_probs=195.0
Q ss_pred CCCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 194 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 194 ~Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.|.+|+++...+||+.+++++|.+ +.+++++|+ +++..+... +.+| .|++++|+|.... ..++..|+++..+
T Consensus 40 ~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~ 113 (330)
T TIGR01140 40 AWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYA----RAWRAAGHEVVEL 113 (330)
T ss_pred HHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEe
Confidence 467888888899999999999974 566666666 777776544 6778 6999999998644 3456779999888
Q ss_pred CCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcccc-c----ccCCcEEE
Q 009523 272 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA-L----SLGADLVL 343 (532)
Q Consensus 272 d~~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~~-l----~~gaDivv 343 (532)
+ |++++++.++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|........ . ..+.++++
T Consensus 114 ~--d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 114 P--DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred C--CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 7 8999999884 4789999999999999999 56677888999999999999865432211 1 12567999
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
.|+||.+|.+| .+.|++++++++++.+....... ..+...+..+.+.++. .....++..++.+.+.+.|++++.
T Consensus 190 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 266 (330)
T TIGR01140 190 RSLTKFFGLAG-LRLGFVVAHPALLARLREALGPW--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGG 266 (330)
T ss_pred EecchhhcCch-hhhhheeCCHHHHHHHHhcCCCC--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999998665 56799999999988887665432 3344545444444442 223344555777778888888764
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+. + .|. .|.++|+.++.. ..|.+.|...++.+..|..+.
T Consensus 267 ~~-~-~~~----------------~~~f~~~~~~~~----~~l~~~l~~~gi~v~pg~~f~------------------- 305 (330)
T TIGR01140 267 LE-V-VGG----------------TALFLLVRTPDA----AALHEALARRGILIRDFDNFP------------------- 305 (330)
T ss_pred ce-E-CCC----------------CCeEEEEEcCCH----HHHHHHHHHCCEEEEECCCCC-------------------
Confidence 42 2 221 366888888642 345555555577777665431
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 501 KYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
+...++|||+++..+ ++ +.+..+|
T Consensus 306 --~~~~~~iRi~~~~~~-~~--~~~~~~l 329 (330)
T TIGR01140 306 --GLDPRYLRFALPTDE-EN--DRLEEAL 329 (330)
T ss_pred --CCCCCEEEEEecCHH-HH--HHHHHhh
Confidence 123569999999644 22 5666655
No 116
>PLN00175 aminotransferase family protein; Provisional
Probab=99.92 E-value=5.4e-22 Score=211.63 Aligned_cols=272 Identities=16% Similarity=0.180 Sum_probs=185.2
Q ss_pred hHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
...+|++++++++ |. + +.++++++++|+..++.+++++||+|++++|.|.... ..++..|.++..++
T Consensus 92 G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~ 167 (413)
T PLN00175 92 GVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE----ATLSMAGAKIKTVT 167 (413)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEE
Confidence 3566777777765 32 2 3445555569999999999999999999999998754 33455688877775
Q ss_pred C------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-c--c-cc---
Q 009523 273 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K--A-LS--- 336 (532)
Q Consensus 273 ~------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-~--~-l~--- 336 (532)
. .|+++|++++.+ ++|+|++++|+||||.+++ +++|+++|+++++++|+|++|...... . + ..
T Consensus 168 ~~~~~~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~ 246 (413)
T PLN00175 168 LRPPDFAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPG 246 (413)
T ss_pred CCcccCCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCC
Confidence 3 268999999987 6999999999999999996 667888999999999999997654211 0 1 11
Q ss_pred -cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q 009523 337 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 411 (532)
Q Consensus 337 -~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~l 411 (532)
.+..+++.|+||.++.+| .+.||+++++++++.+.........+.+....+++...++. +....+...++++.+
T Consensus 247 ~~~~vi~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 247 MYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDIL 325 (413)
T ss_pred CcCcEEEEecchhhccCcc-hheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 234689999999998655 46899999999999888766544445565555555555532 333344555677778
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCceeecCCCcccccccCccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
.+.|+++ ++. +..|. .|.++|+.+.. +......|.+.| +..++.+..|..+... +
T Consensus 326 ~~~L~~~-g~~-~~~p~----------------g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~--~--- 382 (413)
T PLN00175 326 VEGLKEV-GFK-VYPSS----------------GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLN--P--- 382 (413)
T ss_pred HHHHHHC-CCe-ecCCC----------------eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC--C---
Confidence 8888875 232 22221 34467887742 211234555554 3446777666443210 0
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
+..+++|||+++.
T Consensus 383 -------------~~~~~~iRls~~~ 395 (413)
T PLN00175 383 -------------EDGKNLVRFAFCK 395 (413)
T ss_pred -------------CCCCCEEEEEEcC
Confidence 0125799999996
No 117
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=3.1e-22 Score=213.22 Aligned_cols=278 Identities=15% Similarity=0.162 Sum_probs=183.4
Q ss_pred hhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 201 PTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.....|+++++++++. +++++++++++|+..++.+++++||+|++++|.|+... ......|+++..++
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~i~ 148 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYE----LCAAFRHLEVRYVD 148 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHH----HHHHHcCCEEEEEe
Confidence 4567788888888641 35666666679999999999999999999999997643 22344677777765
Q ss_pred C-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccc---
Q 009523 273 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL--- 335 (532)
Q Consensus 273 ~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l--- 335 (532)
. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ..++
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 227 (409)
T PLN02656 149 LLPEKGWEVDLDAVEALADQ-NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF 227 (409)
T ss_pred CCCcCCCCCCHHHHHHHhcc-CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh
Confidence 3 268899998877 6899999999999999975 77889999999999999999764321 1111
Q ss_pred -ccCCcEEEECCccccCCCCCcEEEEEEeC--------hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHH
Q 009523 336 -SLGADLVLHSATKFIGGHNDVLAGSISGS--------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRV 401 (532)
Q Consensus 336 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~--------~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~ 401 (532)
.....+++.|+||.|+.+| .+.||++++ +++++.+.......+ ..+...++++...++ .+....
T Consensus 228 ~~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~ 305 (409)
T PLN02656 228 GSIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKKYFDILG-GPATFIQAAVPTILEQTDESFFKKTI 305 (409)
T ss_pred cccCcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1123588999999988776 568888873 477787776544332 234444444444443 233334
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHH-HHHcCCCceeecC
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKF-IDALKIPYIAPSF 476 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~-l~~L~~~~i~vs~ 476 (532)
++..+++..+.+.|+.++.+..+..|. .|..+|+.++.. ......+ ...+...++.+..
T Consensus 306 ~~~~~~r~~~~~~L~~~~~~~~~~~p~----------------gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~p 369 (409)
T PLN02656 306 NILKQSSDICCDRIKEIPCITCPHKPE----------------GSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILP 369 (409)
T ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCCC----------------eEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEec
Confidence 445566677777887654321111121 356688888521 0112222 3344445777776
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
|..+ | .++++||+++. +.+++.+.+
T Consensus 370 g~~f----------------------g-~~~~iRi~~~~-~~e~l~eal 394 (409)
T PLN02656 370 GTAV----------------------G-LKNWLRITFAA-DPSSLEEAL 394 (409)
T ss_pred chhc----------------------C-CCCeEEEEeCC-CHHHHHHHH
Confidence 6442 1 14789999996 444443333
No 118
>PRK04311 selenocysteine synthase; Provisional
Probab=99.92 E-value=3.2e-23 Score=222.47 Aligned_cols=213 Identities=23% Similarity=0.306 Sum_probs=170.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCc---chHHHHHHhcccCCcEEEEeCC---C
Q 009523 201 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYR---KTRIFIETVLPKMGITATVIDP---A 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~---~t~~~~~~~l~~~Gv~v~~vd~---~ 274 (532)
+..+.+|+.+++++|++++++++||++|+.+++.+ +.+||+||+++.+|. ++..+ ...++..|+++.+++. .
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i-~~~~~~~G~~l~~v~~~~~t 204 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRI-PDVMRQAGARLVEVGTTNRT 204 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhh-HHHHHHCCcEEEEECCCCCC
Confidence 45678999999999999999999999999988855 589999999987543 34433 3456778999988875 4
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCC--C--CcccCHHHHHHHHHhCCCEEEEECC---------CC---CCCcccccccC
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNP--F--LRCVDVKLVSDLCHKKGAIVCIDGT---------FA---TPLNQKALSLG 338 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~Np--t--G~v~dl~~I~~la~~~gi~lIvDet---------~a---~~~~~~~l~~g 338 (532)
+++++++++++ +|++|++++++|+ + +...|+++|+++||+||+++++|+. ++ .+...+++++|
T Consensus 205 ~~~dle~aI~~-~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~G 283 (464)
T PRK04311 205 HLRDYEQAINE-NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAG 283 (464)
T ss_pred CHHHHHHhcCc-cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcC
Confidence 68899999987 7999999999998 3 4678999999999999999999994 21 23334667789
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH--Hhh---hcCCCccHH-----------HHHHHHHhHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHH---VLGGALNPN-----------AAYLIIRGMKTLHLRVQ 402 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~--~~~---~~G~~~~~~-----------~a~l~l~~l~tl~~r~~ 402 (532)
+|++++|++|++|||. +|+++++++++++++. +.+ ..+.+++++ .++..+++++++..|++
T Consensus 284 aDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~ 360 (464)
T PRK04311 284 VDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPE 360 (464)
T ss_pred CcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHH
Confidence 9999999999999884 8999999999887763 111 123334444 34445567778999999
Q ss_pred HHHHHHHHHHHHHHhCC
Q 009523 403 QQNSTALRMAKILEAHP 419 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p 419 (532)
++.+++++++++|++++
T Consensus 361 ~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 361 ELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999875
No 119
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=3.2e-22 Score=212.65 Aligned_cols=270 Identities=16% Similarity=0.148 Sum_probs=184.0
Q ss_pred chhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 200 NPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga--------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
......++++++++++. ++.+++++|++|+.+++.+++++||+|++++|+|.... ..+...|+++..+
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~ 147 (403)
T TIGR01265 72 SVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD----TRAAFSGLEVRLY 147 (403)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEe
Confidence 45567789999998873 35667777789999999999999999999999998643 3445668887776
Q ss_pred CC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCccc----c-cc
Q 009523 272 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-LS 336 (532)
Q Consensus 272 d~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~----~-l~ 336 (532)
+. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... + ..
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 226 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALADE-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMAS 226 (403)
T ss_pred cCCcccCCccCHHHHHHHhCc-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhh
Confidence 43 368999998877 6999999999999999987 7889999999999999999976542111 1 11
Q ss_pred c---CCcEEEECCccccCCCCCcEEEEEEeC-h-H-----HHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHH
Q 009523 337 L---GADLVLHSATKFIGGHNDVLAGSISGS-G-K-----LVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRV 401 (532)
Q Consensus 337 ~---gaDivv~S~sK~lgg~gd~~gG~lv~~-~-~-----li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~ 401 (532)
+ ..-+++.|+||.++.+| .+.||++++ + + +++.+...... ....+...+..+...++ .+....
T Consensus 227 ~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 304 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVPG-WRLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKI 304 (403)
T ss_pred hccCCcEEEEeecccccCCCc-ceEEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHH
Confidence 1 12488899999988776 467888763 2 2 33334333221 22234444444433442 234445
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH----HHHHHHHHHc-CCCceeecC
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL----TATIKFIDAL-KIPYIAPSF 476 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~----~~~~~~l~~L-~~~~i~vs~ 476 (532)
++..+++..+.+.|+.++++. +..|. .|..+|++++... .....+.+.+ +..++.+..
T Consensus 305 ~~~~~~~~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~p 367 (403)
T TIGR01265 305 SVLKSNAELCYEELKDIPGLV-CPKPE----------------GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLP 367 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCce-ecCCC----------------ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeC
Confidence 556677778888888776552 32332 4778899986320 1234555553 455777776
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 516 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e 516 (532)
|..+. .+++|||+++.+
T Consensus 368 g~~f~-----------------------~~~~iRis~~~~ 384 (403)
T TIGR01265 368 GSAFG-----------------------LPNWVRITITVP 384 (403)
T ss_pred ccccC-----------------------CCCeEEEEecCC
Confidence 64421 157899999964
No 120
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.1e-22 Score=213.77 Aligned_cols=285 Identities=17% Similarity=0.262 Sum_probs=191.0
Q ss_pred CCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 197 RYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
+|+.+....|+++||++++.+ +.|++++|+ +++..++..++++||.|++++|+|+..... +...|.++..++.
T Consensus 63 ~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~----~~~~g~~~~~vp~~ 138 (369)
T PRK08153 63 KYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYH----VAGFGGRLVTVPYR 138 (369)
T ss_pred cCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHH----HHHcCCeEEEeeCC
Confidence 355556789999999999863 456666665 899999999999999999999999875432 3345777766653
Q ss_pred ---CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCcc---cccc--cCCcEEE
Q 009523 274 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ---KALS--LGADLVL 343 (532)
Q Consensus 274 ---~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~---~~l~--~gaDivv 343 (532)
.|++++++.+...++++|++++|+||||.+.+.+++.++++. +++++|+||+|...... .++. ....+++
T Consensus 139 ~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 139 DDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 367888776654479999999999999999998887777764 38999999997643211 1111 1234889
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
.|+||.+|.+| ++.||+++++++++.+......+ ..++..++++...++. +....+...++.+.+.+.|++.+
T Consensus 219 ~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g- 294 (369)
T PRK08153 219 RTFSKAYGLAG-ARVGYAIGAPGTIKAFDKVRNHF--GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG- 294 (369)
T ss_pred ecchHhccCcc-hheeeeecCHHHHHHHHHhhcCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 99999998555 46799999999998887765443 3566666555555532 22223344456666777776542
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+. .+|. .|.++++.++.+...+..+++.+...++.+...+.
T Consensus 295 ~~--~~p~----------------~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~--------------------- 335 (369)
T PRK08153 295 LT--PLPS----------------ATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGV--------------------- 335 (369)
T ss_pred Cc--cCCC----------------cCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCC---------------------
Confidence 21 1221 36678887753224466777776656666531111
Q ss_pred hcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 501 KYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
+-.++++|||++. ++.+.+++.|.+++.
T Consensus 336 --~~~~~~iRis~~~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 336 --APLDRCIRVSCGPDEELDLFAEALPEALE 364 (369)
T ss_pred --CCCCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 0024699999995 344556666665554
No 121
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=3e-22 Score=213.33 Aligned_cols=283 Identities=13% Similarity=0.104 Sum_probs=180.1
Q ss_pred hhHHHHHHHHHhhhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 201 PTTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~g------a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.....|++++|++++ . ++.++++++++++.+++.+++++||.|+++.|+|..... .+...|+++..++
T Consensus 74 ~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~----~~~~~g~~~~~~~ 149 (409)
T PLN00143 74 GGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVET----YAIFHHLEIRHFD 149 (409)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH----HHHHcCCEEEEEe
Confidence 445678888888762 2 345555555699999999999999999999999987543 3445677777664
Q ss_pred C-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----ccc---
Q 009523 273 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 335 (532)
Q Consensus 273 ~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~l--- 335 (532)
. .|+++|++++++ +++++++++|+||||.+++ +++|+++|+++++++|+||+|...... .++
T Consensus 150 ~~~~~~~~~d~~~l~~~~~~-~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~ 228 (409)
T PLN00143 150 LLPEKGWEVDLDAVEAIADE-NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF 228 (409)
T ss_pred ccCCCCCcCCHHHHHHhccc-CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhh
Confidence 2 278999998876 6899999999999999998 567888899999999999998653211 111
Q ss_pred c-cCCcEEEECCccccCCCCCcEEEEEEeC-h-HHH------HHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHH
Q 009523 336 S-LGADLVLHSATKFIGGHNDVLAGSISGS-G-KLV------TQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRV 401 (532)
Q Consensus 336 ~-~gaDivv~S~sK~lgg~gd~~gG~lv~~-~-~li------~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~ 401 (532)
. ....+++.|+||.|+.+| .+.||++++ + .++ +.+...... ....+...+.++...++ .+...+
T Consensus 229 ~~~~~vi~~~SfSK~f~~pG-lRvG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 306 (409)
T PLN00143 229 ASIVPVITLGSISKRWMIPG-WGLGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTI 306 (409)
T ss_pred cccCcEEEEccchhhcCCCc-cceEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHH
Confidence 1 123489999999988877 567888873 3 333 233332221 11123333333333332 344445
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----CHHHHHHHHH-HcCCCceeecC
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFID-ALKIPYIAPSF 476 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g----~~~~~~~~l~-~L~~~~i~vs~ 476 (532)
++..++.+.+.+.|++++... .+ +.| ..|.++|+.++. +......++. .+...++.+..
T Consensus 307 ~~~~~~~~~~~~~L~~~~~~~---~~---~~p----------~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~p 370 (409)
T PLN00143 307 NILRAALAFCYDKLKEIPCIM---CP---QKA----------EGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILP 370 (409)
T ss_pred HHHHHHHHHHHHHHhcCCCCC---CC---CCC----------CeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeC
Confidence 555566677777777654321 11 111 146788999862 1112234433 33555777777
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 529 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL 529 (532)
|..+ | .++++||+++.. +.++-++.|.++|
T Consensus 371 g~~f----------------------~-~~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 371 GVTV----------------------G-LKNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred cccc----------------------C-CCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6432 1 147899999963 2233344444444
No 122
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-22 Score=211.17 Aligned_cols=281 Identities=17% Similarity=0.172 Sum_probs=189.8
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+++....|++++|++++. ++.++++++++++.+++.+++++||+|++++|+|.... ..++..|+++..++.
T Consensus 55 ~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~v~~ 130 (353)
T PRK05387 55 RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYP----VYAGLYGIPYEEIPL 130 (353)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHH----HHHHHcCCEEEEeec
Confidence 456666778999999999986 34555555569999999999999999999999996533 334556888777754
Q ss_pred C-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC-CCEEEEECCCCCCCcccc--c--ccCCcEEE
Q 009523 274 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA--L--SLGADLVL 343 (532)
Q Consensus 274 ~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~-gi~lIvDet~a~~~~~~~--l--~~gaDivv 343 (532)
+ |++++++ ++++|++++|+||||.+.+.+++.++++.+ ++++|+||+|........ . ....++++
T Consensus 131 ~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~ 205 (353)
T PRK05387 131 DDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVV 205 (353)
T ss_pred CCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEE
Confidence 2 5666652 367899999999999999999999999875 999999999754211111 1 12346999
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcC-CCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCC
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G-~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p 419 (532)
.|+||.++.+| ++.|++++++++++.++......+ .+.+....+.+...++ .+....++..++++.+.+.|+++
T Consensus 206 ~S~SK~~~~~G-lR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 283 (353)
T PRK05387 206 QTFSKSRSLAG-LRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL- 283 (353)
T ss_pred EehhHhhcchh-hhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99999998555 457999999999998877654332 2345554444444442 23344455556777888888876
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHH
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
++. + +|. .|+++++.+++ .....|.+.|...++.+..- ..+
T Consensus 284 g~~-~-~~~----------------~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~------~~~------------- 324 (353)
T PRK05387 284 GFE-V-LPS----------------KANFVFARHPS--HDAAELAAKLRERGIIVRHF------NKP------------- 324 (353)
T ss_pred CCe-E-CCC----------------cCcEEEEECCC--CCHHHHHHHHHHCCEEEEEC------CCC-------------
Confidence 332 2 232 35688888764 22345555555556555310 001
Q ss_pred HhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 500 LKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
+ .++++|||++. ++.+.+++.|.+++.
T Consensus 325 ---~-~~~~iRis~~~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 325 ---R-IDQFLRITIGTDEEMEALVDALKEILA 352 (353)
T ss_pred ---C-CCCeEEEEeCCHHHHHHHHHHHHHHhh
Confidence 0 24789999985 334556666665553
No 123
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.91 E-value=3e-22 Score=212.68 Aligned_cols=286 Identities=14% Similarity=0.129 Sum_probs=188.0
Q ss_pred CchhHHHHHHHHHhhhC-----C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 199 GNPTTVVVEEKMSALEG-----A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~g-----a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+.+...+|+++++++++ . +++++++++++++.+++.+++++||+|++++|+|.... ..++..|+++..+
T Consensus 71 ~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~ 146 (401)
T TIGR01264 71 PTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLY 146 (401)
T ss_pred CCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEe
Confidence 34556788999999886 2 34566666679999999999999999999999997644 3456678887776
Q ss_pred CC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----ccc-c
Q 009523 272 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S 336 (532)
Q Consensus 272 d~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~l-~ 336 (532)
+. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ .
T Consensus 147 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (401)
T TIGR01264 147 NLLPDKSWEIDLKQLESLIDE-KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS 225 (401)
T ss_pred ecCCccCCCCCHHHHHHHhcc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHH
Confidence 43 368999998876 6899999999999999986 678888899999999999997653211 111 1
Q ss_pred c---CCcEEEECCccccCCCCCcEEEEEEeCh------HHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHH
Q 009523 337 L---GADLVLHSATKFIGGHNDVLAGSISGSG------KLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQ 402 (532)
Q Consensus 337 ~---gaDivv~S~sK~lgg~gd~~gG~lv~~~------~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~~ 402 (532)
. ...+++.|+||.++.+| .+.||+++++ ++++.++..... ....++.....+...+. .+....+
T Consensus 226 ~~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~l~~~~~ 303 (401)
T TIGR01264 226 LSSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRTPQEYFDGTLS 303 (401)
T ss_pred cCCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhCcHHHHHHHHH
Confidence 1 12478999999988776 5688888763 344444443321 12223333333333332 2333344
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHc-CCCceeecCC
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFG 477 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~l~~L-~~~~i~vs~G 477 (532)
+..++.+.+.+.|++++++. +..|. .|.++|+.++.. ......+.+.+ +..++.+..|
T Consensus 304 ~~~~~r~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg 366 (401)
T TIGR01264 304 VLESNAMLCYGALAAVPGLR-PVMPS----------------GAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPG 366 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCc-ccCCC----------------eeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 55567777888888765432 22232 477889987521 11234555554 3457777666
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 531 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~~ 531 (532)
+.+. .++++||+++.. +.++.++.|.+.+++
T Consensus 367 ~~f~-----------------------~~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 367 SCFE-----------------------YPGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred hhcC-----------------------CCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4321 147899999963 234445555555543
No 124
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=2.8e-22 Score=209.00 Aligned_cols=288 Identities=16% Similarity=0.132 Sum_probs=197.0
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 201 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
...+++++.+++++|.+ + .++++||++|+..++.+++++||+|++..+.|.+.. +...++..|.++++++.
T Consensus 32 ~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 109 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGE 109 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCC
Confidence 44778999999999973 3 466777899999999999999999999988877632 22345667888887753
Q ss_pred -CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCccccC
Q 009523 274 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 274 -~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~lg 351 (532)
.|+++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+ ...+....++|+++.|+||+++
T Consensus 110 ~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~ 189 (356)
T cd06451 110 AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALG 189 (356)
T ss_pred CCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhcc
Confidence 37899999997646999999999999999999999999999999999999997543 2344445689999999999999
Q ss_pred CCCCcEEEEEEeChHHHHHHHH---Hhh----------------hcCCCccHHHHHHHHHhHHH-----HHHHHHHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQIRN---LHH----------------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQNST 407 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~~---~~~----------------~~G~~~~~~~a~l~l~~l~t-----l~~r~~~~~~~ 407 (532)
++. ..|+++.++++++.+.. ... ..+++.++...+.+..+++. +....++..++
T Consensus 190 ~p~--g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 267 (356)
T cd06451 190 APP--GLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRL 267 (356)
T ss_pred CCC--CcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 764 26899999888877653 000 11222333332323333332 22334455567
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCcccccccC
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQP 486 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~~~sl~~~p 486 (532)
+.++.+.|++. ++. +..+ +. ...+.++++.++.+ .....+.+.|... ++.++.|.. +
T Consensus 268 ~~~l~~~L~~~-g~~-~~~~--~~-----------~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gI~~~~g~~------~ 325 (356)
T cd06451 268 AKALREGLEAL-GLK-LLAK--PE-----------LRSPTVTAVLVPEG-VDGDEVVRRLMKRYNIEIAGGLG------P 325 (356)
T ss_pred HHHHHHHHHHc-CCe-eccC--cc-----------cCCCceEEEECCCC-CCHHHHHHHHHHhCCEEEecccc------c
Confidence 77788888765 332 2111 10 01234556666532 2345666666554 666655421 0
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
. .++.||+|++..++++.++.+.++|+.
T Consensus 326 ~-----------------~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 326 T-----------------AGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred c-----------------cCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 0 246899999887777777777777654
No 125
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=2e-22 Score=213.43 Aligned_cols=286 Identities=17% Similarity=0.192 Sum_probs=189.0
Q ss_pred CCCCchh-HHHHHHHHHhhh----C----C--CcEEEeCCH-HHHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHHhc
Q 009523 196 GRYGNPT-TVVVEEKMSALE----G----A--ESTVIMASG-MSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVL 261 (532)
Q Consensus 196 ~R~~~p~-~~~Le~~lA~l~----g----a--~~~i~~sSG-~~Ai~~al~all~~Gd~--VIv~~~~y~~t~~~~~~~l 261 (532)
.+|+.+. ...|++++|+++ | . ++.|++++| ++++..++.+++++||+ |+++.|+|.... ..+
T Consensus 58 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~----~~~ 133 (393)
T TIGR03538 58 STYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYE----GAA 133 (393)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchH----HHH
Confidence 3455443 567888888876 2 2 235666565 49999999999999986 999999998754 334
Q ss_pred ccCCcEEEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc
Q 009523 262 PKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN 331 (532)
Q Consensus 262 ~~~Gv~v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~ 331 (532)
...|+++..++. .|++++++++.+ ++|+|++++|+||||.+++ +++|+++|+++|++||+||+|.....
T Consensus 134 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~ 212 (393)
T TIGR03538 134 LLAGAEPYFLNCTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYF 212 (393)
T ss_pred HhcCCeEEEeeccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhccc
Confidence 556788777753 267889888876 6999999999999999998 67888889999999999999764321
Q ss_pred c---cc---c----cc-----CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-
Q 009523 332 Q---KA---L----SL-----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 395 (532)
Q Consensus 332 ~---~~---l----~~-----gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~- 395 (532)
. .+ . .. ...+++.|+||.++.+| .+.||+++++++++++.......+...++..+..+...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 291 (393)
T TIGR03538 213 DEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWND 291 (393)
T ss_pred CCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC
Confidence 1 01 0 11 12489999999887666 5689999999999988876654554455555444443332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCce
Q 009523 396 --TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYI 472 (532)
Q Consensus 396 --tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i 472 (532)
.+....+...++...+.+.|+++ + .+..| ..|..+|++++.+ ...|.+.+ +..++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~p----------------~gg~f~~~~~~~~---~~~~~~~l~~~~gV 349 (393)
T TIGR03538 292 EQHVRENRALYREKFAAVLEILGQV--L-DLELP----------------DAGFYLWPKVPGD---DEAFARALYEEENV 349 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh--C-cccCC----------------CeeEEEEEECCCC---HHHHHHHHHHHCCE
Confidence 23233334445566677777653 1 11222 1477889998722 24455554 34688
Q ss_pred eecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 473 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 473 ~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
.+..|..+..-.. . ..-..++||||++. +.+++.+.+
T Consensus 350 ~v~pg~~f~~~~~-~--------------~~~~~~~~Ris~~~-~~~~l~~~l 386 (393)
T TIGR03538 350 TVLPGRFLAREAE-G--------------VNPGEGRVRIALVA-PLEECVEAA 386 (393)
T ss_pred EEeCCcccccccc-C--------------CCCCCCEEEEEecC-CHHHHHHHH
Confidence 8888865421100 0 00124799999986 344443333
No 126
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=3.4e-23 Score=217.43 Aligned_cols=275 Identities=15% Similarity=0.200 Sum_probs=191.6
Q ss_pred CCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+++....|++.||++++.+ +.|++++|+ +++..++.+++++||+|++++|+|.... ..+...|+++..++.
T Consensus 59 ~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~v~~v~~ 134 (366)
T PRK01533 59 ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYR----HHAIIEGCEVKEVAL 134 (366)
T ss_pred CcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHH----HHHHHcCCEEEEeec
Confidence 3467777889999999999863 456565665 9999999999999999999999998644 345567888887764
Q ss_pred ----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHH---hCCCEEEEECCCCCCCcc----cc---c-ccC
Q 009523 274 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH---KKGAIVCIDGTFATPLNQ----KA---L-SLG 338 (532)
Q Consensus 274 ----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~---~~gi~lIvDet~a~~~~~----~~---l-~~g 338 (532)
.|+++|++++++ ++++|++++|+||||.+++.+++.++++ +++ ++|+||+|...... .. + ..+
T Consensus 135 ~~~~~d~~~l~~~~~~-~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~ 212 (366)
T PRK01533 135 NNGVYDLDEISSVVDN-DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHK 212 (366)
T ss_pred CCCCcCHHHHHHHhCc-CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCC
Confidence 378999999877 6999999999999999999776666654 444 67889997542211 11 1 123
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 415 (532)
..+++.|+||.+|.+| .+.||+++++++++.++.... ....+.....++...++. .....+...++.+++.+.|
T Consensus 213 ~vi~~~SfSK~~~l~G-lRiG~~i~~~~~~~~l~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l 289 (366)
T PRK01533 213 NILVLRTFSKAYGLAS-FRVGYAVGHEELIEKLNVVRL--PFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFC 289 (366)
T ss_pred CEEEEeCchHHhcChH-HHHhHHhCCHHHHHHHHHhcC--CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999998666 457899999999998887653 234566665555555532 2222334445666677777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
+.+ ++. + +| ..|+++++.+++ ...+.+.|...|+.+.. +
T Consensus 290 ~~~-g~~-~-~~----------------~~~nf~~~~~~~----~~~~~~~l~~~GI~Vr~--~---------------- 328 (366)
T PRK01533 290 KEN-EIP-F-YQ----------------SQTNFIFLPVEN----GGEIYEACAHAGFIIRP--F---------------- 328 (366)
T ss_pred HhC-CCc-c-CC----------------CcCcEEEEeCCC----HHHHHHHHHHCCcEEcc--C----------------
Confidence 664 221 1 11 137789998853 23455555555655442 0
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
+++||||+|. ++.+.+++.|++.++
T Consensus 329 ----------~~~iRis~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 329 ----------PNGVRITVGTREQNEGVISVLQQHFE 354 (366)
T ss_pred ----------CCceEEeCCCHHHHHHHHHHHHHHHH
Confidence 3579999996 456777777777654
No 127
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.91 E-value=3.9e-22 Score=211.16 Aligned_cols=285 Identities=13% Similarity=0.145 Sum_probs=188.2
Q ss_pred hHHHHHHHHHhhhC----C-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALEG----A-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~g----a-----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
....|+++++++++ . ++++++++|++|+.+++.+++++||+|++++|+|.+... .++..|+++..++
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 143 (391)
T PRK07309 68 GLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP----IVNLVGAEIVEID 143 (391)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH----HHHHcCCEEEEEe
Confidence 36778888888763 2 246666666799999999999999999999999998543 3445688877775
Q ss_pred C------CCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----c-ccc-
Q 009523 273 P------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----Q-KAL- 335 (532)
Q Consensus 273 ~------~dle~Le~al~~--~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~-~~l- 335 (532)
. .|++.|++++++ .++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..... . ...
T Consensus 144 ~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~ 223 (391)
T PRK07309 144 TTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE 223 (391)
T ss_pred cCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH
Confidence 3 268899988864 25899999999999999987 77888899999999999999765321 1 111
Q ss_pred -ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009523 336 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 410 (532)
Q Consensus 336 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~ 410 (532)
.....+++.|+||.+|.+| ++.|++++++++++.+...........+......+...++. .....++..+++..
T Consensus 224 ~~~~~~i~~~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (391)
T PRK07309 224 YLPDQTILINGLSKSHAMTG-WRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDY 302 (391)
T ss_pred hccCCEEEEecChhhccCcc-ceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Confidence 1234589999999998665 56899999999998887654433333444544444444432 11112333455666
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHH-cCCCceeecCCCcccccccCcc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~-L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
+.+.|+++ ++ .+..|. .|..+|+.++.+. .....+.+. ++..++.+..|..+.
T Consensus 303 ~~~~l~~~-~~-~~~~p~----------------gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~------- 357 (391)
T PRK07309 303 IIEKMTDL-GF-KIIKPD----------------GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFG------- 357 (391)
T ss_pred HHHHHHHC-CC-eecCCC----------------eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhC-------
Confidence 77777765 22 222221 3445788876421 122344433 233467777664421
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 530 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~ 530 (532)
...++++||+++.+ +.++.++.|.++++
T Consensus 358 --------------~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 358 --------------PYGEGYVRLSYAASMETIKEAMKRLKEYME 387 (391)
T ss_pred --------------CCCCCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 01257999999863 33445555555554
No 128
>PRK08912 hypothetical protein; Provisional
Probab=99.91 E-value=3.6e-22 Score=210.97 Aligned_cols=278 Identities=17% Similarity=0.185 Sum_probs=185.8
Q ss_pred CCCCch-hHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 196 GRYGNP-TTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 196 ~R~~~p-~~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
.+|+.+ ...+|++++++++ |. + +.++++++++|+..++.+++++||+|+++.|+|.... ..++..|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g 132 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYL----PLIRRAG 132 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcC
Confidence 345554 3567888888765 32 3 4556666679999999999999999999999998754 3456678
Q ss_pred cEEEEeCC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----c
Q 009523 266 ITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----Q 332 (532)
Q Consensus 266 v~v~~vd~------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~ 332 (532)
+++..++. .|++++++.+.+ ++++|++++|+||||.+.+ +++|.++|+++++++|+|++|..... .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 133 GVPRLVRLEPPHWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred CEEEEEecCcccCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 88776653 268999998877 6999999999999999998 56688999999999999999753211 0
Q ss_pred cc---c-c-cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHHHH
Q 009523 333 KA---L-S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQ 403 (532)
Q Consensus 333 ~~---l-~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l----~tl~~r~~~ 403 (532)
.+ . . .+.++++.|+||.+|.+| .+.|++++++++++.+.......+...++.....+...+ +.+....++
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 290 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRAD 290 (387)
T ss_pred cChhhCCCccCceEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHH
Confidence 11 1 1 245799999999998665 468999999999988876655433333433333333322 222333344
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-C-HHHHHHHHHHc-CCCceeecCCCcc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-D-LTATIKFIDAL-KIPYIAPSFGGCE 480 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~-~~~~~~~l~~L-~~~~i~vs~G~~~ 480 (532)
..++.+.+.+.|+++ ++. +..| ..|.++|+.++. + ......|.+.+ +..++.+..|..+
T Consensus 291 ~~~~~~~l~~~L~~~-g~~-~~~~----------------~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 352 (387)
T PRK08912 291 LARSRDRLAAGLRRI-GFP-VLPS----------------QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAF 352 (387)
T ss_pred HHHHHHHHHHHHHhC-CCc-ccCC----------------CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhh
Confidence 556677777888775 231 2111 134578888863 1 12345566554 4557777776543
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 516 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e 516 (532)
... +-..+++||+++.+
T Consensus 353 ~~~-------------------~~~~~~iRl~~~~~ 369 (387)
T PRK08912 353 YEE-------------------DPVTSVVRFCFAKR 369 (387)
T ss_pred CCC-------------------CCCCCEEEEEEeCC
Confidence 210 00247999999974
No 129
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-22 Score=212.53 Aligned_cols=278 Identities=18% Similarity=0.225 Sum_probs=187.0
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG-~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+.||+++...+|++++|+++|.+ +.|++++| ++++..++.+++++| |+|+++.|+|.... ..++..|+++..+
T Consensus 54 ~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v 129 (354)
T PRK04635 54 LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKAL 129 (354)
T ss_pred hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 57788888899999999999863 34555555 599999999999999 89999999997533 3456678888887
Q ss_pred CCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC-CCEEEEECCCCCCCcccc----c-ccCCc
Q 009523 272 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA----L-SLGAD 340 (532)
Q Consensus 272 d~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~-gi~lIvDet~a~~~~~~~----l-~~gaD 340 (532)
+.+ |++.+++ + + ++++|++++|+||||.+.+.+++.++++.. ++++|+||+|........ . ....-
T Consensus 130 ~~~~~~~~~~~~l~~-~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 130 PLTADYQLPLDYIEQ-L-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNL 206 (354)
T ss_pred ecCCCCCCCHHHHHh-c-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCE
Confidence 643 5677763 4 4 699999999999999999999999998763 799999999765432111 1 11234
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHH
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l-----~tl~~r~~~~~~~a~~la~~L 415 (532)
+++.|+||++|.+| .+.|++++++++++.+......++ .+......+...+ +.+..+.++..++++.+.+.|
T Consensus 207 iv~~S~SK~~~l~G-lRlG~~i~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 207 VVLRTLSKAFALAG-ARCGFTLANEELIEILMRVIAPYP--VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred EEEechHHHhhhhH-HHHhhhhCCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999998555 457899999999988876443222 2322222223333 334444555667778888888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++++.+. + +|. .|+++++.+++ .. .+.+.+...++.+..++. +
T Consensus 284 ~~~~~~~-~-~~~----------------~g~f~~~~~~~-~~---~~~~~l~~~gv~v~~~~~------~--------- 326 (354)
T PRK04635 284 SMYGGAK-V-LEG----------------NGNYVLAKFDD-VD---AVFKALWDAGIVARAYKD------P--------- 326 (354)
T ss_pred HhCCCce-E-CCC----------------CCcEEEEECCC-HH---HHHHHHHHCCEEEEECCC------C---------
Confidence 8876542 3 222 25678888863 22 333444444655542210 0
Q ss_pred HHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+ .+++||||++.+ +.++.|.++|+
T Consensus 327 -------~-~~~~lRis~~~~---e~~~~l~~al~ 350 (354)
T PRK04635 327 -------R-LANCIRFSFSNR---AETDKLIGLIR 350 (354)
T ss_pred -------C-CCCeEEEEeCCH---HHHHHHHHHHH
Confidence 0 246899999852 33445555544
No 130
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.91 E-value=4e-22 Score=212.35 Aligned_cols=285 Identities=20% Similarity=0.198 Sum_probs=193.9
Q ss_pred CCc-hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 198 YGN-PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 198 ~~~-p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
+++ +...+||++||+++|.+++++++||++|+..++..+.+ +||.|+++...|.+... .+...|.++..++.+
T Consensus 87 ~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~ 162 (410)
T PRK13392 87 SGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHN 162 (410)
T ss_pred ccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCC
Confidence 444 36789999999999999999999999999888887754 89988887777766543 334567787777767
Q ss_pred CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-cc--------ccccCCcEE
Q 009523 275 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QK--------ALSLGADLV 342 (532)
Q Consensus 275 dle~Le~al~---~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~--------~l~~gaDiv 342 (532)
|.+.+++.++ ..++++|++++|+||+|.+.|+++|.++|+++|+++|+||+|+.+.. .. ......|++
T Consensus 163 d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div 242 (410)
T PRK13392 163 DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMI 242 (410)
T ss_pred CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEE
Confidence 7777776664 22689999999999999999999999999999999999999874321 11 111246899
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHh
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~ 417 (532)
+.|++|++|.. ||++++++++++.++..... ++...++..++.+...++. ...+.++..++++++.+.|++
T Consensus 243 ~~tlsK~~g~~----GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~ 318 (410)
T PRK13392 243 QGTLAKAFGCL----GGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNA 318 (410)
T ss_pred EEEChHhhhcc----cchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999864 58998999999888765542 3444555555544444443 333445566777888888876
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccccccCCCH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQ 496 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~ 496 (532)
. ++. + +|. .++++.+.++ .......+.+.|. ..++.+..+.. |.. +
T Consensus 319 ~-g~~-~-~~~----------------~~~~~~i~~~-~~~~~~~~~~~L~~~~GI~v~~~~~------p~~------~- 365 (410)
T PRK13392 319 N-GIP-V-MPS----------------PSHIVPVMVG-DPTLCKAISDRLMSEHGIYIQPINY------PTV------P- 365 (410)
T ss_pred c-CCC-C-CCC----------------CCCEEEEEeC-CHHHHHHHHHHHHHhCCEEEeeeCC------CCC------C-
Confidence 4 221 1 111 2456666664 2234556776663 45666654321 110 0
Q ss_pred HHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 497 SERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 497 ~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
-..+.||+++....+++.++.+.++|+
T Consensus 366 -------~~~~~lRis~~~~~t~edid~l~~aL~ 392 (410)
T PRK13392 366 -------RGTERLRITPTPLHDDEDIDALVAALV 392 (410)
T ss_pred -------CCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 123689999876554444455544443
No 131
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=2.6e-22 Score=209.87 Aligned_cols=282 Identities=17% Similarity=0.187 Sum_probs=188.2
Q ss_pred CCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 197 RYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
+|+.+....|++++|++++.+ +.|++++| ++++..++.++ .+|+ +++..|.|.... ..++..|+++..++.+
T Consensus 51 ~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~ 124 (356)
T PRK08056 51 RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLR 124 (356)
T ss_pred cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecc
Confidence 456666889999999999863 34555555 58998888876 6776 667788887533 3456678888877532
Q ss_pred -----CH-HHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----ccc-ccCC
Q 009523 275 -----DM-EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL-SLGA 339 (532)
Q Consensus 275 -----dl-e~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-----~~l-~~ga 339 (532)
++ +++++.+.+ ++++|++++|+||||.+.+ +++|+++|+++++++|+|++|...... ..+ ....
T Consensus 125 ~~~~~~~~~~~~~~~~~-~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 125 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred cccCCCccHHHHHhccC-CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 22 355566665 7999999999999999999 778899999999999999997654321 111 2346
Q ss_pred cEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L 415 (532)
++++.|+||+++.+| .+.||+++ ++++++.++..... ...+...++.+...++ ......++..++++.+.+.|
T Consensus 204 ~i~~~S~SK~~~~~G-~RiG~~v~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 280 (356)
T PRK08056 204 LWVLRSLTKFYAIPG-LRLGYLVNSDDAAVARMRRQQMP--WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQAL 280 (356)
T ss_pred EEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCC--CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999666 45788887 45777777654322 2334444444433332 22222344557777788888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++++++. +. |. .|+.+|+.++.+ ...|.+.|...++.+..|..+.
T Consensus 281 ~~~~~~~-~~-~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~-------------- 325 (356)
T PRK08056 281 CALPLLT-VW-PG----------------RANYLFLRCERP---DIDLQRALLTQRILIRSCANYP-------------- 325 (356)
T ss_pred hcCCCcE-Ec-CC----------------CCcEEEEEcCCC---hHHHHHHHHHCCeEEEECCCCC--------------
Confidence 8766543 22 21 256788888642 2345555555577777664321
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
+...++|||+++- ++.+.+++.|++.++
T Consensus 326 -------~~~~~~iRis~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 326 -------GLDSRYYRVAIRSAAENERLLAALRNVLT 354 (356)
T ss_pred -------CCCCCEEEEEEcCHHHHHHHHHHHHHHHc
Confidence 1235799999997 556777777776653
No 132
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.91 E-value=2.5e-22 Score=210.96 Aligned_cols=299 Identities=22% Similarity=0.247 Sum_probs=210.3
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGAES---TVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga~~---~i~~sSG~~Ai~~al~al---l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
+.+++......+++++.+++++|++. .+++++++.+++.++.++ +++||+|++....|++....+....++.|+
T Consensus 35 ~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~ 114 (371)
T PF00266_consen 35 SHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGA 114 (371)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTE
T ss_pred cchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchh
Confidence 33444456778889999999999854 566778889999999998 799999999999999988777777778899
Q ss_pred EEEEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCc
Q 009523 267 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGAD 340 (532)
Q Consensus 267 ~v~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaD 340 (532)
+++.++. .|++++++++++ ++++|++...+|.+|.+.|+++|.++||++|+++++|.+++.+ ...+..++|+|
T Consensus 115 ~v~~i~~~~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D 193 (371)
T PF00266_consen 115 EVRVIPADPGGSLDLEDLEEALNP-DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGAD 193 (371)
T ss_dssp EEEEEEEGTTSSCSHHHHHHHHHT-TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTES
T ss_pred hhccccccccchhhhhhhhhhhcc-ccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccc
Confidence 9988753 378999999987 7999999999999999999999999999999999999998765 34666678999
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH--
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-- 397 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~~~~~a~l~l~~l~tl-- 397 (532)
+++.|.+|.+||+| .|+++.+++.+++++.... ..+++.+....+.+..+++.+
T Consensus 194 ~~~~s~~Kl~gp~G---~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~ 270 (371)
T PF00266_consen 194 FLVFSSHKLGGPPG---LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEE 270 (371)
T ss_dssp EEEEESTSTTSSST---EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH
T ss_pred eeeecccccCCCCc---hhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhc
Confidence 99999999555555 6888888888887742111 112344443333333333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009523 398 ---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 474 (532)
Q Consensus 398 ---~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~v 474 (532)
....++..+.++++.+.|++.+.+. +.-|.- + ...+++++|.+++. ....+...|...++.+
T Consensus 271 ~g~~~i~~~~~~l~~~~~~~l~~~~~~~-~~~~~~---~---------~~~~~i~~~~~~~~--~~~~~~~~L~~~~I~~ 335 (371)
T PF00266_consen 271 IGIERIRERIRELAEYLREALEELPGIE-VLGPDD---E---------PRRPSIVSFNLPGS--DADDVVKYLEERGIAV 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTEE-ESSSSC---G---------GBGTTEEEEEETTS--SHHHHHHHHHHHTEEE
T ss_pred cccccchhhhhhHHHHHHhhhhcCCcee-Eeeecc---c---------ccccceEEEeecCC--CHHHHHHHHhhcCEEE
Confidence 2233455677888888888888764 322211 1 12578999999762 2233334444336777
Q ss_pred cCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 475 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 475 s~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
+.|..+.. |. ....+. ++.||+|++..++++.++.|
T Consensus 336 ~~G~~~~~---~~-----------~~~~~~-~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 336 STGSACAG---PS-----------LDILGM-GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EESTTTCH---HH-----------HHHHHT-TTEEEEE-GTTSSHHHHHHH
T ss_pred eccCcccH---HH-----------HHHhCC-CCEEEEeccCCCCHHHHhhC
Confidence 77654320 10 111122 38999999999988777654
No 133
>PRK07777 aminotransferase; Validated
Probab=99.91 E-value=1.1e-21 Score=207.34 Aligned_cols=282 Identities=16% Similarity=0.172 Sum_probs=184.3
Q ss_pred hhHHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 201 PTTVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 201 p~~~~Le~~lA~l----~ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+...+|++.++++ +|. + +.+++++|++|+.+++.+++++||+|+++.|.|+.... .+...|.++..+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~----~~~~~g~~~~~~ 136 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA----VIAMAGAHRVPV 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH----HHHHCCCEEEEe
Confidence 3466788888775 453 2 46666677799999999999999999999999987543 334456665555
Q ss_pred CC--------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-------cc
Q 009523 272 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QK 333 (532)
Q Consensus 272 d~--------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-------~~ 333 (532)
+. .|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|..... ..
T Consensus 137 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 215 (387)
T PRK07777 137 PLVPDGRGFALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLA 215 (387)
T ss_pred ecCCccCCCcCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHh
Confidence 32 378999998877 6999999999999999986 77889999999999999999754221 11
Q ss_pred cc--ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHHHHHHHH
Q 009523 334 AL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 407 (532)
Q Consensus 334 ~l--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l----~tl~~r~~~~~~~ 407 (532)
.+ ..+.++++.|+||.+|.+| .+.|++++++++++.+...........+......+...+ +.+....+...++
T Consensus 216 ~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 294 (387)
T PRK07777 216 TLPGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAK 294 (387)
T ss_pred hCCCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 11 1346799999999998665 467899999999888876554333222222222222222 2222333445567
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCceeecCCCccccccc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~ 485 (532)
++.+.+.|+++ ++. +..| ..|.++|+.+++ +......|.+.| +..++.+..|..+....
T Consensus 295 ~~~l~~~L~~~-~~~-~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~- 355 (387)
T PRK07777 295 RDRLAAGLAEA-GFE-VHDS----------------AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPA- 355 (387)
T ss_pred HHHHHHHHHhC-CCC-ccCC----------------CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCC-
Confidence 77777888764 221 1111 134567777652 112345666666 34578888775432100
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
.-.++++||+++. ..+++.+.+
T Consensus 356 -----------------~~~~~~~Ri~~~~-~~~~l~~~l 377 (387)
T PRK07777 356 -----------------DAWNHLVRFAFCK-RDDTLDEAI 377 (387)
T ss_pred -----------------cCCCCeEEEEecC-CHHHHHHHH
Confidence 0124789999997 344443333
No 134
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.91 E-value=6e-22 Score=213.61 Aligned_cols=284 Identities=18% Similarity=0.214 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 201 PTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~----ga---~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.....|++.+++++ |. ++.|++++|+ +|+.++++.+++|||+|++++|+|.+... .++..|+++..++
T Consensus 132 ~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~----~~~~~g~~~~~vp 207 (459)
T COG1167 132 AGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ----ALEALGARVIPVP 207 (459)
T ss_pred CCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH----HHHHcCCcEEecC
Confidence 34455666666654 32 3456665665 99999999999999999999999998664 4556678877776
Q ss_pred CC----CHHHHHHhhcCCCeeEEEEeCCC--CCCCcccCHH---HHHHHHHhCCCEEEEECCCCCCCc----c---ccc-
Q 009523 273 PA----DMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN----Q---KAL- 335 (532)
Q Consensus 273 ~~----dle~Le~al~~~~tklV~lesP~--NptG~v~dl~---~I~~la~~~gi~lIvDet~a~~~~----~---~~l- 335 (532)
.+ |+++|++.++.+++|++|+ +|+ ||||.+++.+ +|.++|++||+++|+|+.|+.... . ..+
T Consensus 208 ~d~~G~~~e~le~~~~~~~~k~~y~-~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld 286 (459)
T COG1167 208 VDEDGIDPEALEEALAQWKPKAVYV-TPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD 286 (459)
T ss_pred CCCCCCCHHHHHHHHhhcCCcEEEE-CCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhC
Confidence 43 8999999998777999999 554 9999999864 799999999999999999765321 1 111
Q ss_pred ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHH----Hh-HHHHHHHHHHHH-HHHH
Q 009523 336 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RG-MKTLHLRVQQQN-STAL 409 (532)
Q Consensus 336 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l----~~-l~tl~~r~~~~~-~~a~ 409 (532)
..+..|++.||||.+.++ ++.||+++++++++++...........+.+.+..+. .| .+....++++.. +..+
T Consensus 287 ~~~rViy~gSFSK~l~Pg--lRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~ 364 (459)
T COG1167 287 APGRVIYLGSFSKTLAPG--LRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRD 364 (459)
T ss_pred CCCCEEEEeeehhhcccc--cceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 236779999999999976 478999999999999887766655555555432222 22 333333444333 4556
Q ss_pred HHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC-CCcccccccCc
Q 009523 410 RMAKILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF-GGCESIVDQPA 487 (532)
Q Consensus 410 ~la~~L~~~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~-G~~~sl~~~pa 487 (532)
.+.+.|+++ |....+..|. .|.++|++++.+ .+...++..+...++.+.. |..+...
T Consensus 365 ~l~~~L~~~~~~~~~~~~p~----------------gG~flwl~l~~~-~~~~~l~~~a~~~gv~i~~~g~~f~~~---- 423 (459)
T COG1167 365 ALLEALAEYLPELATWTRPE----------------GGLFLWLELPEG-IDARELLAAALEKGVVVTPLGSAFSAD---- 423 (459)
T ss_pred HHHHHHHHhCCCCeeeecCC----------------ceEEEEEEcCCC-CCHHHHHHHHHHCCCEEEcCCccccCC----
Confidence 677788776 3344444443 467899999864 3455666666555666666 5443210
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 527 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~ 527 (532)
+-..+.+||+++..+.+++.+.+..
T Consensus 424 ---------------~~~~~~~Rl~~s~~~~e~i~~gi~~ 448 (459)
T COG1167 424 ---------------GDPRNGLRLSFSSPSEEEIEEGIKR 448 (459)
T ss_pred ---------------CCCCCeEEEEcCCCCHHHHHHHHHH
Confidence 0025689999998777666555553
No 135
>PRK07683 aminotransferase A; Validated
Probab=99.91 E-value=1.8e-21 Score=205.86 Aligned_cols=276 Identities=14% Similarity=0.158 Sum_probs=183.4
Q ss_pred chhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 200 NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
.+....||+++++++ |. + +.++++++++|+.+++.+++++||+|+++.|+|...... ++..|+++.+
T Consensus 64 ~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~ 139 (387)
T PRK07683 64 NAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPI----IRLCGAKPVF 139 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHH----HHHcCCEEEE
Confidence 355678888888886 32 2 455555667999999999999999999999999875533 3456888888
Q ss_pred eCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCccc---c-cc-
Q 009523 271 IDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS- 336 (532)
Q Consensus 271 vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~---~-l~- 336 (532)
++.+ |.+++++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... + ..
T Consensus 140 ~~~~~~~~~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 218 (387)
T PRK07683 140 IDTRSTGFRLTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHF 218 (387)
T ss_pred eecCcccCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhc
Confidence 7643 56889998877 6999999999999999987 6788899999999999999987542111 1 11
Q ss_pred ---cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHH
Q 009523 337 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTAL 409 (532)
Q Consensus 337 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~ 409 (532)
.+..+++.|+||.+|.+| ++.||+++++++++.+...........+...+.++...++. +....++..++++
T Consensus 219 ~~~~~~vi~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (387)
T PRK07683 219 PEMREKTIVINGLSKSHSMTG-WRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRD 297 (387)
T ss_pred cCCcCCeEEEeeccccccCcc-ceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 134689999999998555 57899999999998887654332333344444443333332 2222333446666
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH-cCCCceeecCCCcccccccCcc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~-L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
.+.+.|.+. ++. +..|. .|.+++..+++.......|... ++..++.+..|..+.
T Consensus 298 ~~~~~l~~~-~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~------- 352 (387)
T PRK07683 298 YVYNRLISM-GLD-VEKPT----------------GAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS------- 352 (387)
T ss_pred HHHHHHHHc-CCc-ccCCC----------------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC-------
Confidence 777777764 221 11111 3446676665311122334433 455577777765431
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 521 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dl 521 (532)
+..++++||+++. +.+++
T Consensus 353 --------------~~~~~~~Ri~~~~-~~~~~ 370 (387)
T PRK07683 353 --------------EYGEGYVRLSYAY-SIETL 370 (387)
T ss_pred --------------CCCCCeEEEEecC-CHHHH
Confidence 0125799999997 44443
No 136
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.91 E-value=2.7e-21 Score=195.45 Aligned_cols=313 Identities=20% Similarity=0.202 Sum_probs=213.1
Q ss_pred cccCChHHHHHHhh--cccCCCCCCCCCc-hhHHHHHHHHHhhhCC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEc
Q 009523 174 YFFKKTAELIDFKE--KRRASFEYGRYGN-PTTVVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVPAGGHIVTT 246 (532)
Q Consensus 174 ~~~~~~~~~~~~~~--~~~~~~~Y~R~~~-p~~~~Le~~lA~l~ga---~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~ 246 (532)
..|..+..+.+... ..++.|.|+ +.+ ...+++.+...+..+- ++.++++.| +.++..+++++.++||.|++.
T Consensus 35 MDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~ 113 (388)
T COG1168 35 MDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQ 113 (388)
T ss_pred ccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEec
Confidence 34555544333222 134668898 554 4778888888887764 355666555 599999999999999999999
Q ss_pred CCCCcchHHHHHHhcccCCcEEEEeCC--------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHh
Q 009523 247 TDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK 315 (532)
Q Consensus 247 ~~~y~~t~~~~~~~l~~~Gv~v~~vd~--------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~ 315 (532)
.|.|++.++.+ +..|-++...+. .|.++||+++.+.+++++++|+|+||+|++.. +.+|.+||.+
T Consensus 114 tPvY~PF~~~i----~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~k 189 (388)
T COG1168 114 TPVYPPFYNAI----KLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLR 189 (388)
T ss_pred CCCchHHHHHH----hhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHH
Confidence 99999876544 444555555542 28999999998767899999999999999985 7788999999
Q ss_pred CCCEEEEECCCCCCCcc-------cccc-c--CCcEEEECCccccCCCCCcEEEEEEeChHHHHHH-HHHhhhcCCCccH
Q 009523 316 KGAIVCIDGTFATPLNQ-------KALS-L--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI-RNLHHVLGGALNP 384 (532)
Q Consensus 316 ~gi~lIvDet~a~~~~~-------~~l~-~--gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l-~~~~~~~G~~~~~ 384 (532)
||++||.||.++..+.. ..+. . ..-+.+.|.||.|+-.|.-.+-+++.++++.++. +++.......++.
T Consensus 190 h~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~ 269 (388)
T COG1168 190 HGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSA 269 (388)
T ss_pred cCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCch
Confidence 99999999997653221 1111 1 2237888999999977654455666777765544 3343333344444
Q ss_pred HHHHH---H-HHhHHHHHHHHHHHHHHHHHHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---C
Q 009523 385 NAAYL---I-IRGMKTLHLRVQQQNSTALRMAKILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---D 456 (532)
Q Consensus 385 ~~a~l---~-l~~l~tl~~r~~~~~~~a~~la~~L~~~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---~ 456 (532)
+...+ + ..|-.++..-.+-...|...+.+.|.++ |+|+ +.-|. +..++|+.+.. +
T Consensus 270 lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~----------------gTYL~WLD~r~l~l~ 332 (388)
T COG1168 270 LGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQ----------------GTYLAWLDCRELGLD 332 (388)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCC----------------CceeeeeeccccCCC
Confidence 43222 1 2345566666777789999999999876 7774 43332 34588888764 2
Q ss_pred HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhh
Q 009523 457 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHA 531 (532)
Q Consensus 457 ~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~~ 531 (532)
....+.++.. ..+++++.|..+.- -..|++|+.++. ...++.++.|.++|+.
T Consensus 333 d~~l~~~ll~--~akVal~~G~~FG~---------------------~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 333 DSELAEFLLE--EAKVALSPGSTFGE---------------------EGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred hHHHHHHHHH--hhcEeccCCCccCc---------------------CCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 2344444432 34678888855321 126899999996 4567778888888765
No 137
>PRK09148 aminotransferase; Validated
Probab=99.91 E-value=7.1e-22 Score=210.21 Aligned_cols=285 Identities=13% Similarity=0.114 Sum_probs=185.7
Q ss_pred CCCCch-hHHHHHHHHHhhh----CC----CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 196 GRYGNP-TTVVVEEKMSALE----GA----ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 196 ~R~~~p-~~~~Le~~lA~l~----ga----~~~i~~sS-G~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
.+|+.+ ....|++++|+++ |. ++.|++++ +++++..++.+++++||+|++++|+|..... .+...|
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~g 137 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAF----GFIMAG 137 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH----HHHhcC
Confidence 445543 3567888888776 42 32445555 4599999999999999999999999988543 334568
Q ss_pred cEEEEeCCC----CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 266 ITATVIDPA----DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 266 v~v~~vd~~----dle~Le~al~---~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
+++..++.+ ++++++++++ + ++++|++++|+||||.+++. ++|.++|+++|+++|+||+|.....
T Consensus 138 ~~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (405)
T PRK09148 138 GVIRSVPAEPDEEFFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP 216 (405)
T ss_pred CEEEEEeCCCCCCCccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCC
Confidence 888777542 3445555543 3 68999999999999999986 5788889999999999999764321
Q ss_pred cc-c--cc--cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHH
Q 009523 332 QK-A--LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQ 402 (532)
Q Consensus 332 ~~-~--l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~ 402 (532)
.. . +. .+..+++.|+||.++.+| .+.||+++++++++.+...........+......+...++ .+....+
T Consensus 217 ~~s~~~~~~~~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~ 295 (405)
T PRK09148 217 PPSVLQVPGAKDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRE 295 (405)
T ss_pred CCChhhCCCccCcEEEEeccccccCCcc-hheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 11 1 11 123467899999998666 5689999999999998876654443344444443333332 2233334
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHc-CCCceeecCCCc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGC 479 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~--~~~~~~l~~L-~~~~i~vs~G~~ 479 (532)
...++...+.+.|+++. + .+..|. .|.++|++++... .....|.+.+ +..++.+..|..
T Consensus 296 ~~~~~r~~l~~~L~~~~-~-~~~~p~----------------~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 357 (405)
T PRK09148 296 LYKKRRDVLVESFGRAG-W-DIPPPA----------------ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVG 357 (405)
T ss_pred HHHHHHHHHHHHHHHcC-C-ccCCCC----------------eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 44566677778887642 2 121121 4667899887421 1234454443 345777777754
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009523 480 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 526 (532)
Q Consensus 480 ~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~ 526 (532)
+.. ..++++||+++ ++.+++.+.|+
T Consensus 358 f~~---------------------~~~~~~Ri~~~-~~~~~l~~al~ 382 (405)
T PRK09148 358 FGE---------------------HGDGYVRIALV-ENEQRIRQAAR 382 (405)
T ss_pred hCC---------------------CCCCeEEEEec-CCHHHHHHHHH
Confidence 310 02478999998 45555444443
No 138
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=1.1e-21 Score=208.49 Aligned_cols=289 Identities=13% Similarity=0.095 Sum_probs=182.0
Q ss_pred CCCchh-HHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 197 RYGNPT-TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 197 R~~~p~-~~~Le~~lA~l~------ga-~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
+|+.+. ...|++++|+++ +. .+.|++++|+ +++..++.+++++||+|++++|+|...... +...|..
T Consensus 67 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~ 142 (404)
T PRK09265 67 GYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAA----VSLSGGK 142 (404)
T ss_pred CCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHH----HHHcCCE
Confidence 344443 468899999987 33 2345555555 889999999999999999999999875433 3345665
Q ss_pred EEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----c
Q 009523 268 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----Q 332 (532)
Q Consensus 268 v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~ 332 (532)
+..++. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..... .
T Consensus 143 ~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (404)
T PRK09265 143 PVHYLCDEEAGWFPDLDDIRSKITP-RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI 221 (404)
T ss_pred EEEEecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC
Confidence 554421 268899998876 6999999999999999999 88899999999999999999754321 0
Q ss_pred ccccc---CCcEEEECCccccCCCCCcEEEEEEe--ChH----HHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHH-
Q 009523 333 KALSL---GADLVLHSATKFIGGHNDVLAGSISG--SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHL- 399 (532)
Q Consensus 333 ~~l~~---gaDivv~S~sK~lgg~gd~~gG~lv~--~~~----li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~- 399 (532)
..... ...+++.|+||.++.+| ++.|+++. +++ +++.+.... ......+.....++...+. ....
T Consensus 222 ~~~~~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~ 299 (404)
T PRK09265 222 SIASLAPDLLCVTFNGLSKAYRVAG-FRVGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINEL 299 (404)
T ss_pred CHHHcCCCceEEEEecchhhccCcc-cceEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHHH
Confidence 11111 12467899999998766 45778874 443 333333221 1222333333333333332 1111
Q ss_pred --HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH----HHHHHHHHHcCCCcee
Q 009523 400 --RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL----TATIKFIDALKIPYIA 473 (532)
Q Consensus 400 --r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~----~~~~~~l~~L~~~~i~ 473 (532)
..++..++++.+.+.|++++++. +..|. .|.++|+.++... ...+.+.+.+...++.
T Consensus 300 ~~~~~~~~~~r~~~~~~L~~~~~~~-~~~p~----------------~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 362 (404)
T PRK09265 300 ILPGGRLYEQRDRAWELLNAIPGVS-CVKPK----------------GALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVL 362 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCc-ccCCC----------------cceEEEEEecccccCCCCHHHHHHHHHHhCCEE
Confidence 11234456667777887765532 22221 4668888886421 1233444555556777
Q ss_pred ecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 474 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 474 vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
+..|..+.. ..++++||+++. |..++.++.|.++|+
T Consensus 363 v~pg~~F~~---------------------~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 363 LVQGTGFNW---------------------PEPDHFRIVTLPRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred EECchhhCC---------------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 777644310 125789999974 234555666666654
No 139
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.91 E-value=1.6e-21 Score=213.86 Aligned_cols=287 Identities=13% Similarity=0.113 Sum_probs=179.8
Q ss_pred CCCchh-HHHHHHHHHhhh------CC-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 197 RYGNPT-TVVVEEKMSALE------GA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 197 R~~~p~-~~~Le~~lA~l~------ga-~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
+|+.+. ...|+++||+++ +. .+.|++++| ++++.+++.+++++||+|+++.|.|..... .+...|.+
T Consensus 180 ~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~----~~~~~g~~ 255 (517)
T PRK13355 180 GYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA----CVNLAGGT 255 (517)
T ss_pred CCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH----HHHHCCCE
Confidence 355543 788999999987 33 234555555 599999999999999999999999987543 34556777
Q ss_pred EEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----
Q 009523 268 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 332 (532)
Q Consensus 268 v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----- 332 (532)
+..++. .|+++|++++++ ++++|++++|+||||.+++ +++|+++|++||++||+||+|......
T Consensus 256 ~v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~ 334 (517)
T PRK13355 256 AVHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT 334 (517)
T ss_pred EEEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc
Confidence 766642 378999999987 7999999999999999998 778899999999999999997643211
Q ss_pred cccccCC---cEEEECCccccCCCCCcEEEEEE--eChHH----HHHHHHHhhhcCCCccHHHHHHHHHhHHH------H
Q 009523 333 KALSLGA---DLVLHSATKFIGGHNDVLAGSIS--GSGKL----VTQIRNLHHVLGGALNPNAAYLIIRGMKT------L 397 (532)
Q Consensus 333 ~~l~~ga---Divv~S~sK~lgg~gd~~gG~lv--~~~~l----i~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l 397 (532)
....... .+++.|+||.++.+| .+.||++ +++++ ++.+..... ...+.+....+++...++. .
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G-~RiG~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~ 412 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAG-YRIGWMILSGNKRIAKDYIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDY 412 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcc-cceEEEEeeCchhhHHHHHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHH
Confidence 1112212 245699999998766 4578887 44444 333332222 2223344444444433321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHcCCCcee
Q 009523 398 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDALKIPYIA 473 (532)
Q Consensus 398 ~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~l~~L~~~~i~ 473 (532)
....++..+++..+.+.|++.|++. +..|. .+.++++.++.. ......+.+.|...++.
T Consensus 413 ~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~----------------g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~ 475 (517)
T PRK13355 413 LVPGGRVYEQRELVYNALNAIPGIS-AVKPK----------------AAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVL 475 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcc-cCCCC----------------eeeEEEeecCcccCCCCCHHHHHHHHHHhCCEE
Confidence 1122334455677778887765542 22221 234566677531 01222233445556777
Q ss_pred ecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHH
Q 009523 474 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQAL 529 (532)
Q Consensus 474 vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dl---i~dL~~AL 529 (532)
+..|..+.. -.++++|||+.. +.+++ ++.|.+.+
T Consensus 476 v~pg~~F~~---------------------~~~~~~Ris~~~-~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 476 IVQGTGFNW---------------------DKPDHFRVVYLP-RLEDLEDAMDRLADFF 512 (517)
T ss_pred EeCcchhCC---------------------CCcCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 777754310 125799999964 44443 44444444
No 140
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=3.6e-22 Score=209.45 Aligned_cols=295 Identities=16% Similarity=0.146 Sum_probs=195.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCC---------------EEEEcCCCCcchHHHHHHhccc
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG---------------HIVTTTDCYRKTRIFIETVLPK 263 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd---------------~VIv~~~~y~~t~~~~~~~l~~ 263 (532)
..+..+++++.+++++|+++++++++|++|+.+++.+++++|| +||++.+.|......+...+..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~ 122 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL 122 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHh
Confidence 4577889999999999999999999999999999999999998 8888885554321112234455
Q ss_pred CCcEEEEeCC---CCHHHHHHhhcCCCeeEEE-EeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCC
Q 009523 264 MGITATVIDP---ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA 339 (532)
Q Consensus 264 ~Gv~v~~vd~---~dle~Le~al~~~~tklV~-lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~ga 339 (532)
.|+++++++. .|++++++++++ +|++++ +++|+||+|.+.|+++|+++|+++|+++|+|++++..+ .....+|+
T Consensus 123 ~g~~~v~v~~~~~~d~~~le~ai~~-~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~ 200 (363)
T TIGR01437 123 GGGKVVEAGYANECSAEQLEAAITE-KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGA 200 (363)
T ss_pred cCCeEEEEcCCCCCCHHHHHHhcCh-hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCC
Confidence 6878877763 489999999988 688665 68889999999999999999999999999999987332 23345689
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAK 413 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~~~~~a~l~l~~l~tl----~~r~~~~~~~a~~la~ 413 (532)
|++++|+||+++|+. +|++++++++++.++......+.. ........+..+++.+ ..+.++..+++..+.+
T Consensus 201 D~~~~S~~K~l~gp~---~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 201 DLVIYSGAKAIEGPT---SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred CEEEEeCCcccCCCc---eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 999999999998763 789999888887765432211111 1111111112233222 1233445566777888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccC
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 493 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~ 493 (532)
.|.+.|++.....+..... .+ .-..+.|...+.......+.+.|+..++.+..- +
T Consensus 278 ~L~~i~g~~~~~~~~~~~~-~~---------~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r--------~------- 332 (363)
T TIGR01437 278 ALNTLKGVSASIVQDEAGR-DI---------ARAEIRFDESELGMTAADVVQALRQGEPAIYTR--------G------- 332 (363)
T ss_pred HHhcCCCeEEEEecCCCCC-cC---------ceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEe--------e-------
Confidence 9988887754422211000 00 112356655311123456666665433222110 0
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 494 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
.....+.+||++..-+ ++.++.|.++|.++
T Consensus 333 --------~~~~~~~~~l~~~~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 333 --------YKANEGIIEIDPRSVT-GGQLDIIVERIREI 362 (363)
T ss_pred --------eeecCCeEEEEeecCC-HHHHHHHHHHHHHh
Confidence 1124678999988755 56678888887653
No 141
>PRK09082 methionine aminotransferase; Validated
Probab=99.91 E-value=7.1e-22 Score=208.82 Aligned_cols=275 Identities=16% Similarity=0.115 Sum_probs=181.5
Q ss_pred HHHHHHHHHhhhCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 203 TVVVEEKMSALEGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 203 ~~~Le~~lA~l~ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
.+.+.+.+.+++|. + +.+++++|++|+..++.+++.+||+|++++|.|...... ++..|.++..++.+
T Consensus 73 r~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~----~~~~g~~~~~~~~~~~~ 148 (386)
T PRK09082 73 REAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPA----IELAGGRAVRVALQPPD 148 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHH----HHHcCCEEEEEecCccc
Confidence 44455555555664 2 355555667999999999999999999999999875543 34457777777643
Q ss_pred ---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----ccccc----cCC
Q 009523 275 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS----LGA 339 (532)
Q Consensus 275 ---dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~----~ga 339 (532)
|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ..... ...
T Consensus 149 ~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 149 FRVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred ccCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCc
Confidence 78899999987 6999999999999999864 67889999999999999999754221 11111 235
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a~~la~~L 415 (532)
.+++.|+||.+|.+| .+.|++++++++++.++..........+...+..+...++ .+....+...++...+.+.|
T Consensus 228 ~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 306 (386)
T PRK09082 228 AFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAAL 306 (386)
T ss_pred EEEEeechhhccchh-hhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999998665 4679999999999988876544443445544443333333 22222334456677777888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCceeecCCCcccccccCccccccC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWD 493 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~~ 493 (532)
++. ++. +..| ..|.++|+.++. .......|.+.| +..++.+..|+.+...
T Consensus 307 ~~~-~~~-~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~---------- 358 (386)
T PRK09082 307 ANS-RFK-LLPC----------------EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD---------- 358 (386)
T ss_pred HhC-CCc-ccCC----------------CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC----------
Confidence 763 221 1111 134568888862 112234455543 4557777777543210
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009523 494 LSQSERLKYGIMDNLVRFSFGVEDFEDL 521 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG~ed~~dl 521 (532)
+...+++||+++. +.+++
T Consensus 359 ---------~~~~~~~Ri~~~~-~~~~l 376 (386)
T PRK09082 359 ---------PFPHRLVRLCFAK-QEETL 376 (386)
T ss_pred ---------CCCCCEEEEEecC-CHHHH
Confidence 1135799999997 44433
No 142
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=7.2e-22 Score=206.45 Aligned_cols=281 Identities=16% Similarity=0.198 Sum_probs=190.0
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
..+|+++...+||+++|++++.+ +.|++++|+ +++..++.++ .+ +.|+++.|+|+... ..++..|.++..++
T Consensus 48 ~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~----~~~~~~g~~~~~~~ 121 (354)
T PRK06358 48 LVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYE----RALKAFDAEIEYAE 121 (354)
T ss_pred hhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHH----HHHHHcCCeeEEEe
Confidence 34567777789999999999863 445555555 9999888876 44 68999999998644 34455677777664
Q ss_pred CC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----ccc---
Q 009523 273 PA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 335 (532)
Q Consensus 273 ~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~l--- 335 (532)
.+ | +++.+.+.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .++
T Consensus 122 ~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 199 (354)
T PRK06358 122 LTEETNFAAN-EIVLEEIKE-EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYL 199 (354)
T ss_pred CccccCCCcc-HHHHHhhcc-CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhc
Confidence 32 3 345555555 6899999999999999997 667888889999999999997643321 111
Q ss_pred -ccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHH
Q 009523 336 -SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALR 410 (532)
Q Consensus 336 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~ 410 (532)
.....+++.|+||.+|.+| .+.||++++ +.+++.+...... ...+....+++...++ .+...++...++++.
T Consensus 200 ~~~~~vi~~~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 276 (354)
T PRK06358 200 ENFKNLIIIRAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQMREP--WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDF 276 (354)
T ss_pred cCCCCEEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCC--CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1134589999999998555 468888874 6777888766542 2345545454444442 233444555667778
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.|++++++ .+..| .|++++++++.. ..|.+.|...++.+..|..+.
T Consensus 277 l~~~L~~~~~~-~~~~~-----------------~g~f~~~~~~~~----~~~~~~l~~~gI~v~~~~~f~--------- 325 (354)
T PRK06358 277 LYNGLSEFKGI-KVYKP-----------------SVNFIFFKLEKP----IDLRKELLKKGILIRSCSNYR--------- 325 (354)
T ss_pred HHHHHhcCCCc-EEcCC-----------------cceEEEEEcCch----HHHHHHHHHCCeEEEECCCCC---------
Confidence 88888876553 23222 256889998742 345555555577777664431
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 529 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL 529 (532)
+..+++|||++|. ++.+.+++.|.+.+
T Consensus 326 ------------~~~~~~iRls~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 ------------GLDENYYRVAVKSREDNKKLLKALEVIL 353 (354)
T ss_pred ------------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 1135789999997 56677777776654
No 143
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.2e-21 Score=207.58 Aligned_cols=286 Identities=13% Similarity=0.138 Sum_probs=186.0
Q ss_pred hhHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 201 PTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~g-------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.....++++++++++ .++++++++|++|+..++..++++||+|++++|.|..... .++..|+++..++.
T Consensus 66 ~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 141 (397)
T PRK07568 66 QGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNG----FATSAGVKIVPVTT 141 (397)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHH----HHHHcCCEEEEeec
Confidence 346788999998863 2456666777799999999999999999999999986442 34556887777653
Q ss_pred C--------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----ccccc-
Q 009523 274 A--------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS- 336 (532)
Q Consensus 274 ~--------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~- 336 (532)
+ ++++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... .....
T Consensus 142 ~~~~g~~~~~~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~ 220 (397)
T PRK07568 142 KIEEGFHLPSKEEIEKLITP-KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSL 220 (397)
T ss_pred CcccCCCCCCHHHHHHhcCc-cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhc
Confidence 1 46889998877 6999999999999999986 67899999999999999999764321 11111
Q ss_pred ---cCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009523 337 ---LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 408 (532)
Q Consensus 337 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a 408 (532)
....+++.|+||.++.+| .+.|+++++ +++++.+...... ....+...+..+...++ .+....+...+++
T Consensus 221 ~~~~~~~i~~~S~SK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (397)
T PRK07568 221 EGLEDRVIIIDSVSKRYSACG-ARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRR 298 (397)
T ss_pred CCCcCCEEEEecchhhccCCC-cceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 123489999999998766 457888874 6787776544322 22334444433333333 2233334455667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC------CCceeecCCCcccc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK------IPYIAPSFGGCESI 482 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~------~~~i~vs~G~~~sl 482 (532)
..+.+.|++++++ .+..|. .|.++|++++.. ....|.+.+. ..++.+..|..+..
T Consensus 299 ~~l~~~L~~~~~~-~~~~p~----------------g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~ 359 (397)
T PRK07568 299 DILYEELNKIPGV-VCEKPK----------------GAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYA 359 (397)
T ss_pred HHHHHHHhcCCCc-eecCCC----------------cceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcC
Confidence 7788888776554 232231 344678888742 2233443331 13566666643310
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 530 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~ 530 (532)
.+ +...++||||++.. +.++.++.|.++|+
T Consensus 360 --~~----------------~~~~~~iRls~~~~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 360 --TP----------------GLGKNEIRIAYVLNEEDLKRAMEILKEALE 391 (397)
T ss_pred --CC----------------CCCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 00 12347999999853 33445555566554
No 144
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=2.4e-22 Score=209.52 Aligned_cols=279 Identities=17% Similarity=0.212 Sum_probs=195.7
Q ss_pred CCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+.+....+++.+|++++.+ +.|++++|+ +++..++..++++||+|+++.|+|.... ..++..|.++..++.
T Consensus 52 ~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~g~~~~~v~~ 127 (352)
T PRK03321 52 NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYP----ILVQVAGATPVQVPL 127 (352)
T ss_pred CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHH----HHHHHcCCEEEEccC
Confidence 4456678899999999999874 456667776 7788888888999999999999986533 234556888877764
Q ss_pred C-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCcc----ccc----ccC
Q 009523 274 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLG 338 (532)
Q Consensus 274 ~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~----~~l----~~g 338 (532)
+ |++++++++++ ++++|++++|+||||.++|.++|.++|+. +++++|+|++|...... .+. ...
T Consensus 128 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 128 TPDHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CCCCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 3 68999999977 79999999999999999999999999987 59999999997643211 111 112
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L 415 (532)
..+++.|+||.+|.+| ++.|++++++++++.++.... ....+.....++...+ +.+..++++..++...+.+.|
T Consensus 207 ~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L 283 (352)
T PRK03321 207 NVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRKVAV--PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAAL 283 (352)
T ss_pred CEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588899999998554 568999999999998876542 2334555444333333 344445555555666677777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++. ++. + .| ..|.++++.++.+ ...|.+.|...++.+.. +
T Consensus 284 ~~~-~~~-~-~~----------------~~g~~i~i~l~~~---~~~~~~~l~~~gI~v~~--~---------------- 323 (352)
T PRK03321 284 RAA-GWT-V-PP----------------SQANFVWLPLGER---TADFAAAAAEAGVVVRP--F---------------- 323 (352)
T ss_pred HHC-CCc-c-CC----------------CCCCEEEEeCCCC---HHHHHHHHHHCCEEEEc--c----------------
Confidence 764 221 1 11 1367888888532 34566666555655432 0
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHhh
Q 009523 496 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALHA 531 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~~ 531 (532)
.++.|||+++. ++.+.+++.|+++++.
T Consensus 324 ---------~~~~iRi~~~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 324 ---------AGEGVRVTIGAPEENDAFLRAARAWRAG 351 (352)
T ss_pred ---------CCCcEEEeeCCHHHHHHHHHHHHHHhcc
Confidence 12459999986 5567788888887653
No 145
>PRK09105 putative aminotransferase; Provisional
Probab=99.90 E-value=5.3e-22 Score=208.76 Aligned_cols=278 Identities=17% Similarity=0.212 Sum_probs=184.1
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
++|+.+...+|++.+++.+|. +++++++++++++..++.+++++||+|++++|+|.... ..++..|+++..++.
T Consensus 73 ~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~----~~~~~~g~~~~~v~~ 148 (370)
T PRK09105 73 GRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGW----RAADAQGAPVAKVPL 148 (370)
T ss_pred cCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEecC
Confidence 456666788999999999986 34455555569999999999999999999999998754 345567888877753
Q ss_pred -----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCcc----cccccC-CcE
Q 009523 274 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KALSLG-ADL 341 (532)
Q Consensus 274 -----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~----~~l~~g-aDi 341 (532)
.|++++++. .+ ++++|++++|+||||.+.+.+++.++++. +++++|+||+|...... +..+.. ..+
T Consensus 149 ~~~~~~d~~~l~~~-~~-~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 149 RADGAHDVKAMLAA-DP-NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCCCCCHHHHHhc-CC-CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEE
Confidence 367888776 34 58999999999999999999888888754 48999999997532111 111112 247
Q ss_pred EEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 342 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 342 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
++.|+||.+|.+| .+.||+++++++++.+... . ....+......+...+ +.+....+...++.+.+.+.|+++
T Consensus 227 ~~~SfSK~~g~~G-lRiG~~v~~~~~i~~l~~~-~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 227 VLRTFSKLYGMAG-MRLGLAAARPDLLAKLARF-G--HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred EEecccHhhcCCc-cceeeeecCHHHHHHHHhc-C--CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8899999998776 4678999999999888765 1 2223333333333333 223333445556777778888775
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHH
Q 009523 419 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 498 (532)
Q Consensus 419 p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~ 498 (532)
++. +..| .|+++.+.++.+ ...|.+.|...++.+ |..+ +
T Consensus 303 -g~~-~~~~-----------------~~~f~~~~~~~~---~~~l~~~L~~~gI~v--~~~~-----~------------ 341 (370)
T PRK09105 303 -GYK-CTPS-----------------QANCFMVDVKRP---AKAVADAMAKQGVFI--GRSW-----P------------ 341 (370)
T ss_pred -CCC-cCCC-----------------CCcEEEEeCCCC---HHHHHHHHHHCCcEE--ecCC-----C------------
Confidence 321 2111 255666766532 234555554445554 3111 0
Q ss_pred HHhcCCCCCeEEEEecCCC-HHHHHHHHHHHH
Q 009523 499 RLKYGIMDNLVRFSFGVED-FEDLKADVLQAL 529 (532)
Q Consensus 499 ~~~~gi~~~~IRlSvG~ed-~~dli~dL~~AL 529 (532)
..++++||+++.++ .+.+++.|++.+
T Consensus 342 -----~~~~~~Ris~~~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 342 -----IWPNWVRVTVGSEEEMAAFRSAFAKVM 368 (370)
T ss_pred -----CCCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 02579999999632 455555555443
No 146
>PRK08363 alanine aminotransferase; Validated
Probab=99.90 E-value=1.6e-21 Score=206.81 Aligned_cols=286 Identities=14% Similarity=0.114 Sum_probs=182.6
Q ss_pred chhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 200 NPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga--------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.+....|+++++++++. ++.++++++++|+..++.+++++||+|++++|+|...... ++..|..+..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~v~~ 144 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGL----VKFYGGVPVEY 144 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHHcCCEEEEe
Confidence 45677899999998631 3456666667999999999999999999999999986543 34456555544
Q ss_pred -CC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----cc--c
Q 009523 272 -DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA--L 335 (532)
Q Consensus 272 -d~------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~--l 335 (532)
+. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .. +
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~ 223 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITE-KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSL 223 (398)
T ss_pred ccccccCCcCCHHHHHhhCCc-ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHc
Confidence 21 368889998877 6999999999999999998 788999999999999999997643211 11 1
Q ss_pred c-cCCcEEEECCccccCCCCCcEEEEEEe--ChHHHHHHHHHhhhc---CCCccHHHHHHHHHhH----HHHHHHHHHHH
Q 009523 336 S-LGADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLHHVL---GGALNPNAAYLIIRGM----KTLHLRVQQQN 405 (532)
Q Consensus 336 ~-~gaDivv~S~sK~lgg~gd~~gG~lv~--~~~li~~l~~~~~~~---G~~~~~~~a~l~l~~l----~tl~~r~~~~~ 405 (532)
. ....+++.|+||.++.+| ++.||++. ++++++.++...... ....+.....++...+ +.+....++..
T Consensus 224 ~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~ 302 (398)
T PRK08363 224 TKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLK 302 (398)
T ss_pred CcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 1 123478899999987666 46788886 667776665433211 1223444333333333 23333345555
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHH-HHcCCCceeecCCCccccc
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFI-DALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l-~~L~~~~i~vs~G~~~sl~ 483 (532)
++...+.+.|++++.+. +..|. .|.++|+.+++. ......++ ..++..++.+..|..+..
T Consensus 303 ~~~~~l~~~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~- 364 (398)
T PRK08363 303 ERRDYIYKRLNEIPGIS-TTKPQ----------------GAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGE- 364 (398)
T ss_pred HHHHHHHHHHhcCCCCE-ecCCC----------------eEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC-
Confidence 66777788887765542 32221 244556677641 00122332 334555777766654310
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 529 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL 529 (532)
..+++||||++.. +.++.++.|.+.+
T Consensus 365 --------------------~~~~~iRis~~~~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 365 --------------------YGAGHFRLVFLPPVEILEEAMDRFEEFM 392 (398)
T ss_pred --------------------CCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 1257999999853 2233344444444
No 147
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=2.7e-22 Score=209.25 Aligned_cols=282 Identities=16% Similarity=0.169 Sum_probs=191.1
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhcc----CC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~----~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+++++++++++|.+ +++++++++++++.++.++.. +| ++|++....|++....+. .++..|++++.++.
T Consensus 42 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~~ 120 (353)
T TIGR03235 42 KAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLPV 120 (353)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEcc
Confidence 45778999999999974 455555556899998887753 56 789999988988766553 34567999888864
Q ss_pred -----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCc
Q 009523 274 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 347 (532)
Q Consensus 274 -----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~s 347 (532)
.|+++|++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+. ..+....++|+++.|++
T Consensus 121 ~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~ 199 (353)
T TIGR03235 121 DESGRIDVDELADAIRP-DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGH 199 (353)
T ss_pred CCCCcCCHHHHHHhCCC-CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehh
Confidence 378999999987 69999999999999999999999999999999999999976543 34445678999999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHH--HHHH-------hhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQ--IRNL-------HHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~--l~~~-------~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~ 414 (532)
|++|++| .|+++.+++.+.. ++.. .....++.+....+.+..+++. +..+.+++.+.+..+.+.
T Consensus 200 K~~gp~g---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~ 276 (353)
T TIGR03235 200 KIYGPKG---IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDA 276 (353)
T ss_pred hcCCCCc---eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9987665 6777777654322 1110 0011223333333333333332 234445555666777777
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 494 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~ 494 (532)
|++ ++++-+..|. ....++++|.+++ ...+.+...|+. +++++.|..++. . ..-
T Consensus 277 l~~-~g~~~~~~~~--------------~~~~~i~~~~~~~--~~~~~v~~~L~~-~i~v~~g~~~~~----~----~~~ 330 (353)
T TIGR03235 277 LQT-LGVKLNGDPA--------------ETIPHILNFSIDG--VNSEALIVNLRA-DAAVSTGSACSS----S----KYE 330 (353)
T ss_pred hcc-CCeEEeCCcc--------------cccCCEEEEEeCC--cCHHHHHHHHhC-CeEEEchhhcCC----C----CCC
Confidence 765 5553221111 1135688888875 223455556654 788888865431 1 111
Q ss_pred CHHHHHhcCCCC----CeEEEEe
Q 009523 495 SQSERLKYGIMD----NLVRFSF 513 (532)
Q Consensus 495 ~~~~~~~~gi~~----~~IRlSv 513 (532)
+...+.++|+++ +.||+|+
T Consensus 331 ~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 331 PSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred CCHHHHHcCCCHHHhCccEEEeC
Confidence 346678888864 7899985
No 148
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4e-22 Score=209.60 Aligned_cols=281 Identities=18% Similarity=0.235 Sum_probs=190.7
Q ss_pred CCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+++....|++++|+++|.+ +.|++++|+ +++..++.+++++||+|+++.|+|+... ..++..|+++..++.
T Consensus 66 ~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~~ 141 (371)
T PRK05166 66 RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVTV 141 (371)
T ss_pred hcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEeec
Confidence 4566666678999999999863 445555555 9999999999999999999999998643 345567888887754
Q ss_pred C-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCcc----cc---cc-c-
Q 009523 274 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KA---LS-L- 337 (532)
Q Consensus 274 ~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~----~~---l~-~- 337 (532)
+ |++++++++++ ++++|++++|+||||.+++.+++.++++. .++++|+|++|...... .. .. .
T Consensus 142 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 220 (371)
T PRK05166 142 TPDLGFDLDALCAAVAR-APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARG 220 (371)
T ss_pred CCCCCCCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcC
Confidence 3 68999999877 68999999999999999998777777653 47899999997543211 11 11 1
Q ss_pred CCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHH
Q 009523 338 GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAK 413 (532)
Q Consensus 338 gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~ 413 (532)
...+++.|+||.+|.+| ++.||++. ++++++.++.....++ .+.....++...+ +.+....+...++.+.+.+
T Consensus 221 ~~vi~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 297 (371)
T PRK05166 221 LPWIVLRTFSKAYGLAG-LRVGYGLVSDPELVGLLDRVRTPFN--VNGAAQAAALAALDDEEHLAKGVALALAERERLKK 297 (371)
T ss_pred CCEEEEeechHhhhcch-hheeeeecCCHHHHHHHHHhccCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 23588999999998555 46788665 6788887776543333 3444433333333 2334444455566777888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccC
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 493 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~ 493 (532)
.|+++ ++. + +|. .|.++|+.++.+ ...|.+.+...++.+..|.. +
T Consensus 298 ~L~~~-g~~-~-~p~----------------~g~fl~~~~~~~---~~~l~~~l~~~gi~v~p~~~------~------- 342 (371)
T PRK05166 298 ELAEM-GYR-I-APS----------------RANFLFFDARRP---ASAVAEALLRQGVIVKPWKQ------P------- 342 (371)
T ss_pred HHHHC-cCe-e-CCC----------------cCCEEEEeCCCC---HHHHHHHHHHCCeEEecCCC------C-------
Confidence 88876 332 2 221 366888887532 34455555545776665521 0
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHH
Q 009523 494 LSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQAL 529 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG~ed-~~dli~dL~~AL 529 (532)
+ .+++|||+++..+ .+++++.|+..+
T Consensus 343 ---------~-~~~~iRi~~~~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 343 ---------G-FETFIRVSIGSPEENDHFVAALDKVL 369 (371)
T ss_pred ---------C-CCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 1 2579999999754 566666665544
No 149
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=7.5e-22 Score=205.07 Aligned_cols=304 Identities=17% Similarity=0.153 Sum_probs=208.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
+..|...++|+++++++|.+++++++||++|+..++.++ +++||+|+++.++|.++... +...|+++.+++.+
T Consensus 15 ~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 15 TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANA----ILLLGATPVFVDIDPD 90 (352)
T ss_pred cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH----HHHcCCeEEEEecCCC
Confidence 346889999999999999989999999999999999988 68999999999999886543 34568888877532
Q ss_pred ----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc--ccccCCcEEEECCc-
Q 009523 275 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSAT- 347 (532)
Q Consensus 275 ----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~--~l~~gaDivv~S~s- 347 (532)
|++++++++++ ++++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+.... ......|+.+.|++
T Consensus 91 ~~~~d~~~l~~~i~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITP-RTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCc-CCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCC
Confidence 68999999976 79999985 568999999999999999999999999987553322 12223688999976
Q ss_pred -cccCCCCCcEEEEEEeC-hHHHHHHHHHhhh---------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009523 348 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV---------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 410 (532)
Q Consensus 348 -K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~---------------~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~ 410 (532)
|+++++ .||+++.+ +++.++++..... ++..+++..+++.+..++.+....++..+++++
T Consensus 167 ~K~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~ 243 (352)
T cd00616 167 TKNLTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAER 243 (352)
T ss_pred CCCCccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999644 36777765 5777766543221 112345666777777777777777888899999
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
+.+.|.+.+++..+ .+.-.. .....++.|.+++. ......+.+.|...++.++. .+....+....
T Consensus 244 ~~~~L~~~~g~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~--~~~~~~~~~~~ 309 (352)
T cd00616 244 YKELLADLPGIRLP-DVPPGV-----------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV--HYPPLHHQPPY 309 (352)
T ss_pred HHHHhcCCCCccCC-CCCCCC-----------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee--ecCccccCHhh
Confidence 99999987776422 221000 01245888888630 12344555555444443321 11111000000
Q ss_pred c------ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 490 S------YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 490 s------~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
. ....+. +..+..+.|||+++...+++.++.+.++|+
T Consensus 310 ~~~~~~~~~~~~~----a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 310 KKLLGYPPGDLPN----AEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hhccCCCcCCChH----HHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0 000111 111235799999999888888888888774
No 150
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.90 E-value=1e-21 Score=203.37 Aligned_cols=269 Identities=19% Similarity=0.231 Sum_probs=178.4
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCH
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 276 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dl 276 (532)
+|+.+. ..|+++|++.+|.++.++++++.+++.+++ .+.+||+|++++|+|+... ..++..|+++..++.
T Consensus 46 ~yp~~~-~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~--- 115 (330)
T PRK05664 46 RLPETD-DGLEAAARAYYGAPQLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDE--- 115 (330)
T ss_pred hCCCCh-HHHHHHHHHHhCCCCEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH----HHHHHcCCeEEEech---
Confidence 355555 789999999999876665555559988775 3579999999999998754 455677999888875
Q ss_pred HHHHHhhcCCCeeEEEEeCCCCCCCcccCHH---HHHHHHHhCCCEEEEECCCCCCCcc---cccc-cCCcEEEECCccc
Q 009523 277 EGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ---KALS-LGADLVLHSATKF 349 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP~NptG~v~dl~---~I~~la~~~gi~lIvDet~a~~~~~---~~l~-~gaDivv~S~sK~ 349 (532)
++++++++ +++++++++|+||||.+++.+ +|+++|+++|+++|+||+|...... ..+. ....+++.|+||.
T Consensus 116 ~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~ 193 (330)
T PRK05664 116 AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKF 193 (330)
T ss_pred hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecccc
Confidence 45666664 478899999999999999855 5555678899999999998644221 1111 1234899999999
Q ss_pred cCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009523 350 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKVKRVHY 426 (532)
Q Consensus 350 lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p~v~~V~~ 426 (532)
+|.+| ++.||+++++++++.+......+ ..+....+++...+.. .....++..++++.+.+.|+++. +.
T Consensus 194 ~gl~G-lRiG~~v~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~---- 265 (330)
T PRK05664 194 FGLAG-ARLGFVLAEPALLRALAELLGPW--TVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LT---- 265 (330)
T ss_pred ccCCC-cceEEEEeCHHHHHHHHHhcCCC--CCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-Cc----
Confidence 98665 46899999999999887765432 2344444444444432 22233444566777888887752 10
Q ss_pred CCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCC
Q 009523 427 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 506 (532)
Q Consensus 427 Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~ 506 (532)
|. .+.+.++++.++ + ...+.+.|...++.+.. + + ..
T Consensus 266 ~~--------------~~~~~f~~~~~~-~---~~~~~~~l~~~gi~v~~---f----------------------~-~~ 301 (330)
T PRK05664 266 PA--------------GGCALFQWVRTE-D---AAALHEFLARRGILTRL---F----------------------E-QP 301 (330)
T ss_pred cc--------------CCcceEEEEecC-C---HHHHHHHHHHCCeEEEE---C----------------------C-CC
Confidence 10 122356777764 2 24455555555665531 0 0 13
Q ss_pred CeEEEEecC--CCHHHHHHHHHHHH
Q 009523 507 NLVRFSFGV--EDFEDLKADVLQAL 529 (532)
Q Consensus 507 ~~IRlSvG~--ed~~dli~dL~~AL 529 (532)
++||||+|. ++.+++++.|++..
T Consensus 302 ~~iRis~~~~~~~~~~l~~al~~~~ 326 (330)
T PRK05664 302 ASLRFGLPADEADWARLDQALLAYR 326 (330)
T ss_pred CeEEEECCCCHHHHHHHHHHHHHHH
Confidence 689999994 34555555555443
No 151
>PRK08175 aminotransferase; Validated
Probab=99.90 E-value=1.2e-21 Score=207.79 Aligned_cols=278 Identities=15% Similarity=0.158 Sum_probs=182.3
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga----~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..+|++++++++ |. ++.+++++|+ +++..++..+++|||+|++++|+|...... +...|+++..++.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 144 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYG----AVIAGAQVRSVPL 144 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHHcCCeEEEEec
Confidence 567888888765 32 2245555555 999999999999999999999999875432 3346777777754
Q ss_pred C----CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCc----ccc---cc-
Q 009523 274 A----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN----QKA---LS- 336 (532)
Q Consensus 274 ~----dle~Le~al~~--~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~----~~~---l~- 336 (532)
+ +.++++++++. .++++|++++|+||||.+.+. ++|+++|+++|+++|+|++|..... ..+ +.
T Consensus 145 ~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~ 224 (395)
T PRK08175 145 VEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG 224 (395)
T ss_pred ccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC
Confidence 3 47888887763 268999999999999999997 6888899999999999999754221 011 11
Q ss_pred -cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q 009523 337 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 411 (532)
Q Consensus 337 -~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~l 411 (532)
.+..+++.|+||.+|.+| .+.||+++++++++.+.+.........+......+...+.. +....+...++...+
T Consensus 225 ~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (395)
T PRK08175 225 AKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVL 303 (395)
T ss_pred cccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 133477899999998665 45789999999999888766543333333333322333321 222233444666777
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHc-CCCceeecCCCcccccccCcc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~--~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~ 488 (532)
.+.|+++ ++ .+..|. .|.++|++++... .....|...+ +..++.+..|..+. +
T Consensus 304 ~~~L~~~-~~-~~~~p~----------------~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~----~-- 359 (395)
T PRK08175 304 VKGLHEA-GW-MVEMPK----------------ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG----D-- 359 (395)
T ss_pred HHHHHHc-CC-cccCCC----------------EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC----c--
Confidence 7888765 23 222221 4778999997531 1245565543 45677777764431 0
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
..++++||+++. +.+.+.+.|
T Consensus 360 ---------------~~~~~lRis~~~-~~~~~~~al 380 (395)
T PRK08175 360 ---------------YGDTHVRFALIE-NRDRIRQAI 380 (395)
T ss_pred ---------------CCCCeEEEEeCC-CHHHHHHHH
Confidence 124689999984 444443333
No 152
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=1.3e-21 Score=211.83 Aligned_cols=289 Identities=14% Similarity=0.181 Sum_probs=184.7
Q ss_pred CCCCch-hHHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcc-c
Q 009523 196 GRYGNP-TTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-K 263 (532)
Q Consensus 196 ~R~~~p-~~~~Le~~lA~l~g--------a-~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~-~ 263 (532)
.+|+++ ....|+++||++++ . .+.|++++|+ +++..++.++++|||.|++++|.|.+.... +. .
T Consensus 80 ~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~----~~~~ 155 (468)
T PLN02450 80 ALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRD----LKWR 155 (468)
T ss_pred hcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHH----Hhhc
Confidence 345544 34578888888874 1 2345555655 999999999999999999999999875432 33 4
Q ss_pred CCcEEEEeCCC-------CHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCC
Q 009523 264 MGITATVIDPA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 264 ~Gv~v~~vd~~-------dle~Le~al~~-----~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~ 328 (532)
.|+++..++.+ |++++++++++ .++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+.
T Consensus 156 ~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~ 235 (468)
T PLN02450 156 TGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSG 235 (468)
T ss_pred CCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccc
Confidence 67787777532 56888887753 26899999999999999998 45678888999999999999874
Q ss_pred CCcc-----ccc------------ccCCcEEEECCccccCCCCCcEEEEEEeChH-HHHHHHHHhhhcCCCccHHHHHHH
Q 009523 329 PLNQ-----KAL------------SLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLI 390 (532)
Q Consensus 329 ~~~~-----~~l------------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~-li~~l~~~~~~~G~~~~~~~a~l~ 390 (532)
.... ..+ .....+++.|+||.++.+| .+.|+++++++ +++.+.... .++. .+.....++
T Consensus 236 ~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~~~~~-~~~~-~s~~~Q~a~ 312 (468)
T PLN02450 236 TVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAATKMS-SFGL-VSSQTQYLL 312 (468)
T ss_pred cccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHH
Confidence 2110 111 1223589999999998555 46889998754 455555443 2332 344444444
Q ss_pred HHhHHH-------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----HH
Q 009523 391 IRGMKT-------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LT 458 (532)
Q Consensus 391 l~~l~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-----~~ 458 (532)
...++. +....++..+..+.+.+.|+++ ++. +..| ..|.++|+.++.. .+
T Consensus 313 ~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~-~~~~----------------~~g~flwi~l~~~~~~~~~~ 374 (468)
T PLN02450 313 SALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIK-CLKS----------------NAGLFCWVDMRHLLKSNTFE 374 (468)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCC----------------CceEEEEEEchHhcCcCCch
Confidence 444322 2333444556667777888775 331 1111 1355889888631 11
Q ss_pred HHHHHHHHc-CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009523 459 ATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 530 (532)
Q Consensus 459 ~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed---~~dli~dL~~AL~ 530 (532)
....+.+.+ +..++.+..|..+.. ...+++||+++..+ .++.++.|.+++.
T Consensus 375 ~~~~l~~~ll~~~gV~v~PG~~f~~---------------------~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 375 AEMELWKKIVYEVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEETLDLAMKRLKSFVE 429 (468)
T ss_pred HHHHHHHHHHHhCCEEEeCccccCC---------------------CCCCEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 223344443 345788887755320 12579999999533 3444555555554
No 153
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=6.8e-22 Score=207.52 Aligned_cols=217 Identities=18% Similarity=0.165 Sum_probs=157.9
Q ss_pred CCCCCchhHHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 195 YGRYGNPTTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~----g--a-~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
+.+|+++....|++++|+++ | . .+.|++++|+ +++..++.+++++||.|+++.|+|..... .+...|+
T Consensus 59 ~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~----~~~~~g~ 134 (368)
T PRK03317 59 LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPI----IARGTHT 134 (368)
T ss_pred hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHhcCC
Confidence 45667777788999999988 3 2 2445565555 99999999999999999999999987543 3445677
Q ss_pred EEEEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---ccc---
Q 009523 267 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KAL--- 335 (532)
Q Consensus 267 ~v~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~---~~l--- 335 (532)
++..++. .|+++++++++++++++|++++|+||||.+.+.+++.++++.+++++|+||+|...... ...
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 135 EWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred eeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 7666542 37899999987546899999999999999999999999999999999999997643210 111
Q ss_pred c-cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHH
Q 009523 336 S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRM 411 (532)
Q Consensus 336 ~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~l 411 (532)
. ....+++.|+||.+|.+| ++.|++++++++++.++..... ...++..+.++...++ .+..++++..++.+.+
T Consensus 215 ~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~--~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRLVRLP--YHLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred HhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHhcCCC--CCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 1 123478899999998555 4679999999999988765432 2345555555444443 3333444455666677
Q ss_pred HHHHHhC
Q 009523 412 AKILEAH 418 (532)
Q Consensus 412 a~~L~~~ 418 (532)
.+.|+++
T Consensus 292 ~~~L~~~ 298 (368)
T PRK03317 292 VAWLREL 298 (368)
T ss_pred HHHHHHC
Confidence 7777765
No 154
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=3.1e-21 Score=205.34 Aligned_cols=283 Identities=20% Similarity=0.189 Sum_probs=196.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle 277 (532)
++...+||++||+++|.+.+++++||++|+..++..+.+ +||.|++....|+.+...+ ...|.++..++..|++
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~ 164 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPA 164 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHH
Confidence 457899999999999999999999999999999987765 7888877777776655433 3346677778878888
Q ss_pred HHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-------c--ccccCCcEEEEC
Q 009523 278 GLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLHS 345 (532)
Q Consensus 278 ~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~-------~--~l~~gaDivv~S 345 (532)
++++.++. .++++|++|+++|++|.+.|+++|.++|+++|+++|+|++++.++.- . ......|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 88887752 25899999999999999999999999999999999999997643310 0 111235888899
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCCC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~~p~ 420 (532)
++|.+|.. ||++++++++++.++..... ++...++..++.+...++.+. .+.++..++.+++.+.|++. +
T Consensus 245 lsKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 319 (406)
T PRK13393 245 LAKAFGVM----GGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-G 319 (406)
T ss_pred Cchhhccc----CceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999964 58899999988888765432 344556665555555555432 23344456777788888763 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccccccCccccccCCCHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
+ +.+ ++.|+++.+.+. +......+.+.|.. .++.++.+. .|.. +
T Consensus 320 ~-----~~~-------------~~~~~i~~v~~~-~~~~~~~l~~~L~~~~Gi~v~~~~------~p~~------p---- 364 (406)
T PRK13393 320 I-----PHL-------------PNPSHIVPVMVG-DPVLCKQISDELLDRYGIYVQPIN------YPTV------P---- 364 (406)
T ss_pred C-----CcC-------------CCCCCeEEEEeC-CHHHHHHHHHHHHHhCCEEEEeEC------CCCC------C----
Confidence 1 111 123667887664 32345666666644 366655431 1210 0
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 500 LKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
...+.||||+....+++.++.+.++|+
T Consensus 365 ----~g~~~iRis~~~~~t~edid~l~~~l~ 391 (406)
T PRK13393 365 ----RGTERLRITPSPLHTDADIEHLVQALS 391 (406)
T ss_pred ----CCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 013689999987666555555555554
No 155
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.90 E-value=3e-21 Score=205.10 Aligned_cols=282 Identities=21% Similarity=0.215 Sum_probs=192.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle 277 (532)
++...+|+++||+++|.+.+++++||++|+..++..+.+ +|+.|+.....|..+... +...|+++..++..|++
T Consensus 89 ~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~ 164 (402)
T TIGR01821 89 NIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRHNDVA 164 (402)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECCCCHH
Confidence 678899999999999998999999999999999988765 677777665566544332 34457777667777888
Q ss_pred HHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-------c--ccccCCcEEEEC
Q 009523 278 GLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLHS 345 (532)
Q Consensus 278 ~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~-------~--~l~~gaDivv~S 345 (532)
++++.++. .++++|++|+|+||+|.+.|+++|.++|+++|+++|+|++++.++.. . ......|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t 244 (402)
T TIGR01821 165 HLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGT 244 (402)
T ss_pred HHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEe
Confidence 88887752 25899999999999999999999999999999999999997633210 0 111236899999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCCC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~~p~ 420 (532)
++|.+|+. ||++++++++++.++..... +....++..++.++..++.+. .+.++..++.+++.+.|+++ +
T Consensus 245 ~sKa~g~~----GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 319 (402)
T TIGR01821 245 LAKAFGVV----GGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL-G 319 (402)
T ss_pred chhhhccC----CceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999965 58899999988888754332 334456666666656665432 33444557778888888764 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccccccCCCHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
+ +.+++ .++++.+.++. ...+..+.+.|. ..++.++... .|.. +
T Consensus 320 ~-----~~~~~-------------~~~i~~i~~~~-~~~a~~~~~~L~~~~Gi~v~~~~------~p~~------~---- 364 (402)
T TIGR01821 320 I-----PVIPN-------------PSHIVPVIIGD-AALCKKVSDLLLNKHGIYVQPIN------YPTV------P---- 364 (402)
T ss_pred C-----CcCCC-------------CCCEEEEEeCC-HHHHHHHHHHHHhcCCEEEEeEC------CCCC------C----
Confidence 2 11111 25677887743 234556666653 3355554321 1210 0
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 500 LKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
...+.||||+....+++.++.+.++|
T Consensus 365 ----~g~~~lRis~~~~~t~edi~~~~~~l 390 (402)
T TIGR01821 365 ----RGTERLRITPTPAHTDKMIDDLVEAL 390 (402)
T ss_pred ----CCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 02358999987654444444444444
No 156
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.90 E-value=3.8e-21 Score=203.07 Aligned_cols=284 Identities=16% Similarity=0.152 Sum_probs=193.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|++....+ ...|.++..++..|++++
T Consensus 86 ~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~l 161 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADL 161 (397)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH----HhcCCceEEeCCCCHHHH
Confidence 3567889999999999888999999999999999999999999999999998765433 344666666776789999
Q ss_pred HHhhcC---C--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-cc------c--cccCCcEEEEC
Q 009523 280 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QK------A--LSLGADLVLHS 345 (532)
Q Consensus 280 e~al~~---~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~------~--l~~gaDivv~S 345 (532)
++.+++ . ++++|++++..|++|.+.++++|.++|+++|+++|+|++|..++. .. . +..++|+++.|
T Consensus 162 ~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S 241 (397)
T PRK06939 162 EAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGT 241 (397)
T ss_pred HHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEE
Confidence 888753 2 588999888899999999999999999999999999999854321 10 1 11256899999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+||+++|. .+|++++++++++.++.... .+++...+..++.+...++.+ ....++..++.+.+.+.|++..
T Consensus 242 ~sK~~~g~---r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 317 (397)
T PRK06939 242 LGKALGGA---SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAG- 317 (397)
T ss_pred CHHHhCcc---CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-
Confidence 99999654 47999999999888875432 223333444344344444433 2334455577777788887642
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+. + .+ +.++++.+.++. ......|.+.|...++.+. ++.+ +..
T Consensus 318 ~~-~-~~----------------~~~~~~~~~~~~-~~~~~~~~~~L~~~gI~v~-~~~~-----~~~------------ 360 (397)
T PRK06939 318 FT-L-GP----------------GEHPIIPVMLGD-AKLAQEFADRLLEEGVYVI-GFSF-----PVV------------ 360 (397)
T ss_pred CC-c-CC----------------CCCCEEEEEECC-HHHHHHHHHHHHHCCceEe-eeCC-----CCC------------
Confidence 21 1 11 124566665643 2345567776655566665 2211 100
Q ss_pred hcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 501 KYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
+-..+.||++++. ++.++.++.|.++++
T Consensus 361 --~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~ 392 (397)
T PRK06939 361 --PKGQARIRTQMSAAHTKEQLDRAIDAFEKVGK 392 (397)
T ss_pred --CCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 0113689999876 334445555555544
No 157
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6e-21 Score=202.84 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=180.6
Q ss_pred HHHHHHHHhhhCC---CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC------
Q 009523 204 VVVEEKMSALEGA---ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 273 (532)
Q Consensus 204 ~~Le~~lA~l~ga---~~~i~~sS-G~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~------ 273 (532)
+.+.+.+++..|. ++.+++++ +++|+..++.+++++||+|++++|+|......+ ...+..+..++.
T Consensus 77 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~----~~~~~~~~~v~~~~~~~~ 152 (402)
T PRK06107 77 KAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMV----LANDGTPVIVACPEEQGF 152 (402)
T ss_pred HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHH----HHcCCEEEEecCCcccCC
Confidence 4444445544454 23344555 569999999999999999999999888754333 223334434432
Q ss_pred -CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhC-CCEEEEECCCCCCCc----ccc-cc-----cC
Q 009523 274 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKK-GAIVCIDGTFATPLN----QKA-LS-----LG 338 (532)
Q Consensus 274 -~dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~-gi~lIvDet~a~~~~----~~~-l~-----~g 338 (532)
.|++++++++++ ++++|++++|+||||.+++. ++|+++|+++ |+++|+|++|..... ... .. .+
T Consensus 153 ~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 153 KLTPEALEAAITP-RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred CCCHHHHHhhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 257899998876 69999999999999999974 6778888998 999999999753211 011 11 12
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a~~la~~ 414 (532)
..+++.|+||.++.+| .+.||+++++++++.++......+...+...++++...++ .+....+...++...+.+.
T Consensus 232 ~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK06107 232 RVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALAL 310 (402)
T ss_pred CEEEEeccchhhcCcc-cceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 4588999999997565 5689999999999998887765555566666655555443 2333344455667777788
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--------CH--HHHHHHHHH-cCCCceeecCCCccccc
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--------DL--TATIKFIDA-LKIPYIAPSFGGCESIV 483 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g--------~~--~~~~~~l~~-L~~~~i~vs~G~~~sl~ 483 (532)
|++++++. +..|. .|..+|+.++. +. .....++.. ++..++.+..|..+
T Consensus 311 L~~~~g~~-~~~p~----------------gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F--- 370 (402)
T PRK06107 311 LNAIPGLS-CLVPD----------------GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY--- 370 (402)
T ss_pred HhcCCCCc-ccCCC----------------cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc---
Confidence 87765432 21111 35567777631 10 122344433 34457777766432
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 531 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~~ 531 (532)
|. ++++|||++.+ +.++.++.|.+.+++
T Consensus 371 -------------------g~-~~~iRis~~~~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 371 -------------------GL-SPYFRLSIATSLETLEEACARIERAVAA 400 (402)
T ss_pred -------------------CC-CCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 21 46899999973 223344555555543
No 158
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=9e-22 Score=204.36 Aligned_cols=271 Identities=17% Similarity=0.221 Sum_probs=183.5
Q ss_pred CCCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 194 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 194 ~Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.+.+|+.+....|+++++++++.+ +.|++++|+ +++..++..+ +||+|+++.|+|.... ...+..|+++..+
T Consensus 48 ~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v 121 (337)
T PRK03967 48 PFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYS----FYAKLNGIPVIDV 121 (337)
T ss_pred ccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHH----HHHHHcCCeEEEe
Confidence 356777777889999999999863 455555555 8888777665 7999999999997432 3345678888777
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccc---cc-cCCcEE
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---LS-LGADLV 342 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~---l~-~gaDiv 342 (532)
+. .|++.+++.+ + +++++++++|+||||.+.+.++|.++++ +++++|+|++|........ .. ....++
T Consensus 122 ~~~~~~~~d~~~l~~~~-~-~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 198 (337)
T PRK03967 122 PLKEDFTIDGERIAEKA-K-NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLIL 198 (337)
T ss_pred ecCCCCCcCHHHHHHhc-c-CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEE
Confidence 54 3678888765 3 5889999999999999999999999995 6999999999864321111 11 123588
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCC
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p 419 (532)
+.|+||.++.+| ++.||+++++++++.++...... ..+.....++...++ .+..+++...+++..+.+.|.++
T Consensus 199 l~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~- 274 (337)
T PRK03967 199 LRTFSKAFGLAG-IRAGYAIANEEIIDALYRIKPPF--SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY- 274 (337)
T ss_pred EecchHhhcchh-hhheeeecCHHHHHHHHhhcCCC--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 999999998555 56899999999999888765433 234554444443333 33334444555666666666542
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHH
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
.+|. .|..+|+.++ +.+.|...++.+..++
T Consensus 275 -----~~~~----------------~~~~~~~~~~--------~~~~l~~~gi~v~~~~--------------------- 304 (337)
T PRK03967 275 -----AYPS----------------DANFLLLKLD--------AYDYLLENGIVVRKLS--------------------- 304 (337)
T ss_pred -----cCCC----------------CCcEEEEhHH--------HHHHHHHCCEEEEeCC---------------------
Confidence 1221 3567777653 2233333355554321
Q ss_pred HhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 500 LKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
+..++++||+++. ++.+.+++.|.++++
T Consensus 305 ---~~~~~~~Ri~~~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 305 ---GRLEGHIRVTVGKREENDEFIKALKEIKE 333 (337)
T ss_pred ---CCCCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 0125699999997 456677777776654
No 159
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=1.2e-21 Score=208.27 Aligned_cols=299 Identities=19% Similarity=0.205 Sum_probs=191.7
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 200 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all----~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+..+++|+.+++++|++ ++++++||++|+.+++.++. ++||+|++++.+|+++...+. .++..|+++++++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-~~~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCR-QLEREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHH-HHHhCCCEEEEEcc
Confidence 356788999999999974 47777888899998887763 789999999999988765553 34556888888864
Q ss_pred C-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCc
Q 009523 274 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 347 (532)
Q Consensus 274 ~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~s 347 (532)
+ |+++|++++++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|++
T Consensus 127 ~~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRD-DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCC-CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehh
Confidence 3 79999999987 699999999999999999999999999999999999999876533 3444668999999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHHHhh-------hcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILE 416 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~~~~-------~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L~ 416 (532)
|.+|++| .|+++.+++...++..... ...++.+......+..+++. .....++..+.++++.+.|+
T Consensus 206 K~~gp~g---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~ 282 (404)
T PRK14012 206 KIYGPKG---IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIK 282 (404)
T ss_pred hccCCCc---eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 9887664 3444444332222211000 01112222221111122222 22334455566677777777
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc-ccCccccccCCC
Q 009523 417 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV-DQPAIMSYWDLS 495 (532)
Q Consensus 417 ~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~-~~pa~~s~~~~~ 495 (532)
+.+.+... .+..... .....++|.+.+. ..++..|+ +++++.|..+... .+|.
T Consensus 283 ~~~~i~~~-~~~~~~~-----------~~~~~~~~~~~~~----~~~~~~l~--~~~i~~g~~~~~~~~~~~-------- 336 (404)
T PRK14012 283 DIEEVYLN-GDLEQRV-----------PGNLNVSFNYVEG----ESLIMALK--DLAVSSGSACTSASLEPS-------- 336 (404)
T ss_pred cCCCEEEe-CCccccC-----------CCEEEEEEeCcCH----HHHHHhCC--CeEEEchhhhCCCCCCCC--------
Confidence 77766422 1100000 0122456665321 34566665 5677776543211 1111
Q ss_pred HHHHHhcCC----CCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 496 QSERLKYGI----MDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi----~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.....+|+ ..+.||||++..++++.++.+.++|+
T Consensus 337 -~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~ 374 (404)
T PRK14012 337 -YVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVR 374 (404)
T ss_pred -HHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHH
Confidence 11123444 35799999998766666666665554
No 160
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.4e-21 Score=203.92 Aligned_cols=279 Identities=13% Similarity=0.097 Sum_probs=177.0
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
....|++.+|+++ |. ++.|++++| ++|+..++.+++++||.|++++|+|..... .++..|+++..++
T Consensus 72 G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~ 147 (403)
T PRK08636 72 GIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ----AFILAGGNVHKMP 147 (403)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEe
Confidence 4556777777765 52 224555555 599999999999999999999999988543 3455677777664
Q ss_pred C-------CCHH----HHHHhhcC--CCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCcc----
Q 009523 273 P-------ADME----GLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ---- 332 (532)
Q Consensus 273 ~-------~dle----~Le~al~~--~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~~---- 332 (532)
. .|++ .++++++. .++++|++++|+||||.+++. ++|+++|++|++++|+|++|......
T Consensus 148 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~ 227 (403)
T PRK08636 148 LEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKT 227 (403)
T ss_pred ccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCC
Confidence 2 2444 45666642 268999999999999999985 67888899999999999997643211
Q ss_pred cc---ccc--CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHHHH
Q 009523 333 KA---LSL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQ 403 (532)
Q Consensus 333 ~~---l~~--gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l----~tl~~r~~~ 403 (532)
.+ ++. ...+++.|+||.+|.+| .+.||+++++++++.+.......+...+......+...+ +.+....+.
T Consensus 228 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 306 (403)
T PRK08636 228 PSILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRET 306 (403)
T ss_pred CChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 11 111 22356789999997665 578999999999988877654322222222222222222 222222334
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHH-cCCCceeecCCCcc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDA-LKIPYIAPSFGGCE 480 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~--~~~~~~l~~-L~~~~i~vs~G~~~ 480 (532)
..++.+.+.+.|+++ ++ .+..| ..|.++|+.++... .....|.+. ++..++.+..|..+
T Consensus 307 ~~~~~~~l~~~L~~~-~~-~~~~p----------------~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f 368 (403)
T PRK08636 307 YRKRRDVLIESFANA-GW-ELQKP----------------RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGF 368 (403)
T ss_pred HHHHHHHHHHHHHHC-CC-cccCC----------------CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhh
Confidence 456666777788764 22 12222 14678899987421 123455544 33457777766443
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
. +..++++||+++. +.+++.+.+
T Consensus 369 ~---------------------~~~~~~iRi~~~~-~~~~l~~~~ 391 (403)
T PRK08636 369 G---------------------EYGDEYVRIALIE-NENRIRQAA 391 (403)
T ss_pred C---------------------cCCCCeEEEEecC-CHHHHHHHH
Confidence 1 0124799999994 444443333
No 161
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.90 E-value=5.2e-21 Score=207.98 Aligned_cols=292 Identities=14% Similarity=0.107 Sum_probs=184.0
Q ss_pred CCCCch-hHHHHHHHHHhhhC----C----CcEEEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 196 GRYGNP-TTVVVEEKMSALEG----A----ESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 196 ~R~~~p-~~~~Le~~lA~l~g----a----~~~i~~sSG~~Ai~~al~all-~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
..|+.+ ....|+++||++++ . +++++++++++|+..++.+++ ++||+|+++.|+|..... .++..|
T Consensus 109 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~----~~~~~g 184 (481)
T PTZ00377 109 GAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSA----AITLLG 184 (481)
T ss_pred cCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHH----HHHHcC
Confidence 334433 46678888888763 1 344555555599999999998 799999999999987553 344567
Q ss_pred cEEEEeCC-------CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 266 ITATVIDP-------ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 266 v~v~~vd~-------~dle~Le~al~~~-----~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
.++..++. .|+++|++++++. ++|+|++++|+||||.+++ +++|+++|+++|+++|+||+|....
T Consensus 185 ~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 185 GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 66666542 2679999988631 5899999999999999998 7788999999999999999976432
Q ss_pred c-----cccc-----ccC-------CcEEEECCcccc-CCCCCcEEEEEEe---ChHHHHHHHHHhhhcCCCccHHHHHH
Q 009523 331 N-----QKAL-----SLG-------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYL 389 (532)
Q Consensus 331 ~-----~~~l-----~~g-------aDivv~S~sK~l-gg~gd~~gG~lv~---~~~li~~l~~~~~~~G~~~~~~~a~l 389 (532)
. ...+ .+. ..++++|+||.+ +.+| .+.||+++ ++++++.+....... .+.+.....+
T Consensus 265 ~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~G-lRiG~~~~~~~p~~li~~l~~~~~~~-~~~~~~~Q~a 342 (481)
T PTZ00377 265 YDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECG-RRGGYFELTNIPPEVREQIYKLASIN-LCSNVVGQLM 342 (481)
T ss_pred cCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCc-CceEEEEEeCCCHHHHHHHHHHhhee-cCCChHHHHH
Confidence 1 1010 111 237889999975 4344 46888886 788998887765432 2344444444
Q ss_pred HHHhHH----------HHHHHHH----HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc-
Q 009523 390 IIRGMK----------TLHLRVQ----QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD- 454 (532)
Q Consensus 390 ~l~~l~----------tl~~r~~----~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~- 454 (532)
+...++ .....++ ...++++.+.+.|++++++. +..|. .|..+|+.++
T Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~----------------gg~fl~~~~~l 405 (481)
T PTZ00377 343 TGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVE----------------GAMYAFPRIEL 405 (481)
T ss_pred HHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCC----------------eeEEEEeeccC
Confidence 433331 1222222 23466677788888776553 22221 3456665553
Q ss_pred -CCHH----------HHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHH
Q 009523 455 -GDLT----------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDL 521 (532)
Q Consensus 455 -g~~~----------~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dl 521 (532)
.... ....+...++..++.+..|+.+.. . -.++++|||++.+ +.++.
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~--~------------------~~~~~~Rls~~~~~e~l~~~ 465 (481)
T PTZ00377 406 PEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQ--K------------------PGTYHFRITILPPEEQIEEM 465 (481)
T ss_pred chhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC--C------------------CCCCEEEEEECCCHHHHHHH
Confidence 1100 111123344555788887765421 0 0246899999943 23444
Q ss_pred HHHHHHHHh
Q 009523 522 KADVLQALH 530 (532)
Q Consensus 522 i~dL~~AL~ 530 (532)
++.|.+.++
T Consensus 466 l~rl~~~~~ 474 (481)
T PTZ00377 466 VKKIKEFHE 474 (481)
T ss_pred HHHHHHHHH
Confidence 555555554
No 162
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.90 E-value=3.8e-21 Score=200.30 Aligned_cols=272 Identities=22% Similarity=0.260 Sum_probs=185.0
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEc---CCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 199 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTT---TDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~---~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..+..++||+++|+++|. +++++++||.+|+..++.+++++||+|+++ .+.|.... ..++..|.++. ..
T Consensus 52 ~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~~--~~ 125 (346)
T TIGR03576 52 PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEYF--ES 125 (346)
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEEe--cc
Confidence 347889999999999998 789999999999999999999999999975 35565432 34455576653 33
Q ss_pred CCHHHHHHhhcCCCeeEEEEeCCCCCCCcc---cCHHHHHHHHHhCCCEEEEECCCCCCCc----c-cccccCCcEEEEC
Q 009523 274 ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSLGADLVLHS 345 (532)
Q Consensus 274 ~dle~Le~al~~~~tklV~lesP~NptG~v---~dl~~I~~la~~~gi~lIvDet~a~~~~----~-~~l~~gaDivv~S 345 (532)
.++++++. . + ++++|++ +++|++|.+ .|+++|+++|+++|+++++||+|+.+.. . .....++|+++.|
T Consensus 126 ~~l~~l~~-~-~-~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s 201 (346)
T TIGR03576 126 DELSELKK-I-D-GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTS 201 (346)
T ss_pred CCHHHHhh-C-c-CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEec
Confidence 46666543 2 3 5888888 457899999 5788999999999999999999886531 1 1234568999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceE
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKR 423 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~ 423 (532)
+||+++|. ++|++++++++++.++.....++.+.++..++.+..+++... .+.+...++...+.+.+.+ + .
T Consensus 202 ~SKalaG~---r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~---~-~ 274 (346)
T TIGR03576 202 TDKLMDGP---RGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK---L-N 274 (346)
T ss_pred cchhcccc---ceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh---C-C
Confidence 99988654 589999999999999887766665556667777777776532 1222222333334444442 1 1
Q ss_pred EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC--HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHh
Q 009523 424 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 501 (532)
Q Consensus 424 V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~--~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~ 501 (532)
+ +|. .++++++.+++. .+.+. +.|+..++.+..|..+ +
T Consensus 275 ~-~~~----------------~~~f~~~~~~~~~~~~~~~---~ll~~~gV~v~~~~~f-----~--------------- 314 (346)
T TIGR03576 275 V-ERT----------------PTGFVIKGVEEEKLIEIGL---DLLRNYGIITITAVGM-----P--------------- 314 (346)
T ss_pred C-CcC----------------CCeEEEEeCCCCCHHHHHH---HHHHhCCEEEeCCccc-----C---------------
Confidence 1 121 234788887642 12333 3344456666654321 0
Q ss_pred cCCCCCeEEEEecCCC-----HHHHHHHHHHHH
Q 009523 502 YGIMDNLVRFSFGVED-----FEDLKADVLQAL 529 (532)
Q Consensus 502 ~gi~~~~IRlSvG~ed-----~~dli~dL~~AL 529 (532)
+ .++++|||++.++ .+.+++.|++.|
T Consensus 315 -~-~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 315 -G-ASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -C-CCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 1 2579999999866 566666666544
No 163
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.9e-21 Score=203.29 Aligned_cols=275 Identities=14% Similarity=0.128 Sum_probs=177.4
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 197 RYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga-~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
+|+++....|++++|++++. .+.|++++| ++++..++.+++++||.|++++|+|.... ......|..+..++.
T Consensus 61 ~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~----~~~~~~g~~~~~~~l~ 136 (357)
T PRK14809 61 SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYG----MSARYHHGEVREYPVS 136 (357)
T ss_pred cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEEecc
Confidence 34555677899999999985 344555555 59999999999999999999999997433 223344555555432
Q ss_pred ------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCcc-cc---cc-cCCc
Q 009523 274 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KA---LS-LGAD 340 (532)
Q Consensus 274 ------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~~-~~---l~-~gaD 340 (532)
.+.+++++.. + ++++|++++|+||||.+.+.+++.++++.. ++++|+||+|...... .. .. ....
T Consensus 137 ~~~~~~~~~~~~~~~~-~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~v 214 (357)
T PRK14809 137 KADDFEQTADTVLDAY-D-GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDV 214 (357)
T ss_pred cCcCCCcCHHHHHHhh-c-CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCE
Confidence 1456666554 2 489999999999999999988877777653 7899999997653221 11 11 2345
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHh
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~ 417 (532)
+++.|+||.++.+| ++.|++++++++++++.+..... ..+...+.++...+.. +....+...++.+.+.+.|..
T Consensus 215 i~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 291 (357)
T PRK14809 215 AVLRTFSKAYGLAG-LRLGYAVVPEEWADAYARVNTPF--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA 291 (357)
T ss_pred EEEecchhHhcCcc-hhheeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88899999998655 46899999999998887754322 3455555554444432 222222233334444454432
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
. .+| ..|.++++++++ ...|.+.+...++.+..|..+
T Consensus 292 ~------~~~----------------~~g~f~~~~~~~----~~~~~~~l~~~gv~v~~g~~f----------------- 328 (357)
T PRK14809 292 P------TWE----------------SAGNFVLAEVGD----ASAVAEAAQERGVIVRDCTSF----------------- 328 (357)
T ss_pred c------cCC----------------CCCCEEEEECCC----HHHHHHHHHHCCEEEEECccC-----------------
Confidence 1 112 146788998852 234555565557777766432
Q ss_pred HHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009523 498 ERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 529 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL 529 (532)
| .+++|||+++. ++.++.++.|.+++
T Consensus 329 -----~-~~~~iRls~~~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 329 -----G-LPECIRITCGTREETERAVEVLNEVL 355 (357)
T ss_pred -----C-CCCeEEEecCCHHHHHHHHHHHHHHh
Confidence 1 13689999984 33444555555544
No 164
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.90 E-value=1.8e-21 Score=203.18 Aligned_cols=276 Identities=17% Similarity=0.222 Sum_probs=187.4
Q ss_pred CCCCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhccc
Q 009523 195 YGRYGNPT-TVVVEEKMSALEG--------AESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPK 263 (532)
Q Consensus 195 Y~R~~~p~-~~~Le~~lA~l~g--------a~~~i~~sSG~-~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~ 263 (532)
..+|+.+. ...|++++|++++ .+..+++++|+ +++..++..+ .++||.|++++|+|..... .++.
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~----~~~~ 112 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE----AARL 112 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH----HHHH
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCccccccc----cccc
Confidence 34555554 8899999999988 33367788887 6666666666 6799999999999998654 4455
Q ss_pred CCcEEEEeC-------CCCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHH---HHhCCCEEEEECCCCC
Q 009523 264 MGITATVID-------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFAT 328 (532)
Q Consensus 264 ~Gv~v~~vd-------~~dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~l---a~~~gi~lIvDet~a~ 328 (532)
.|.++..++ ..|+++|++.+++. ++++|++++|+||||.+.+.+++.++ |+++|+++|+|++|..
T Consensus 113 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~ 192 (363)
T PF00155_consen 113 LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSD 192 (363)
T ss_dssp TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTT
T ss_pred cCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceec
Confidence 677777776 34899999988763 47899999999999999986655555 9999999999999876
Q ss_pred CCccc--------ccccCC-cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----
Q 009523 329 PLNQK--------ALSLGA-DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---- 395 (532)
Q Consensus 329 ~~~~~--------~l~~ga-Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---- 395 (532)
..... ....+. .+++.|+||.+|.+| ++.|++++++++++.++........ +...+..+...+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~ 269 (363)
T PF00155_consen 193 LIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPEL 269 (363)
T ss_dssp GBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHH
T ss_pred cccCCCccCcccccccccccceeeeeccccccccc-cccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccc
Confidence 43321 112233 489999999998665 3578888888999998877665444 3333332222222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-c
Q 009523 396 ---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-Y 471 (532)
Q Consensus 396 ---tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~ 471 (532)
.+..+.++..++.+.+.+.|++. ++.....+ .|.++++.++. .....|.+.|... +
T Consensus 270 ~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-----------------~~~~~~~~~~~--~~~~~l~~~L~~~~g 329 (363)
T PF00155_consen 270 VEKWLEELRERLRENRDLLREALEEI-GITVLPPE-----------------AGFFLWVRLDP--NDAEELAQELLEEYG 329 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-----------------BSSEEEEEESH--HHHHHHHHHHHHHHT
T ss_pred cccccccchhhHHHHHHHHHHHHHHh-hhheeecc-----------------CccEEEEEccc--chHHHHHHHHHHhCC
Confidence 44455666667888888888876 33322111 35567777753 2445555555443 6
Q ss_pred eeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009523 472 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 520 (532)
Q Consensus 472 i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~d 520 (532)
+.+..|..+ +. +++|||+++.-+.++
T Consensus 330 i~v~pg~~~----------------------~~-~~~iRi~~a~~~~e~ 355 (363)
T PF00155_consen 330 ILVRPGSYF----------------------GV-PGYIRISLASHSEED 355 (363)
T ss_dssp EEEEEGGGG----------------------TS-TTEEEEEGGCSCHHH
T ss_pred EEEEecCCC----------------------CC-CCEEEEEeccCCHHH
Confidence 666655332 22 579999994444443
No 165
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.89 E-value=8e-21 Score=200.15 Aligned_cols=288 Identities=15% Similarity=0.110 Sum_probs=194.5
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
+.+...+..++++++++++.|.+..+++++|++++..++.+++++||.|+++++.|++.... +...|+++..++..
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~----~~~~g~~~~~~~~~ 147 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDG----LRLTKATKKIYKHA 147 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEeCCC
Confidence 33444677899999999999988889999999999989999999999999999999875432 23356777777777
Q ss_pred CHHHHHHhhcCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---------cccccCCcEE
Q 009523 275 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLV 342 (532)
Q Consensus 275 dle~Le~al~~~---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~---------~~l~~gaDiv 342 (532)
|++++++.+++. ++++|++++++||+|.+.|+++|.++|++||+++|+|++++.+... .....+.|++
T Consensus 148 d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (385)
T TIGR01825 148 DMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQ 227 (385)
T ss_pred CHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEE
Confidence 888888877532 5899999999999999999999999999999999999998654211 1123467899
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHh
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~ 417 (532)
+.|+||++++. +|++++++++++.+..... .+++..++...+.+..+++.+. ...++..++.+.+.+.|++
T Consensus 228 ~~s~sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 303 (385)
T TIGR01825 228 VGTLSKAIGVV----GGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGK 303 (385)
T ss_pred EEeccHHhhcC----CCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999854 5889999988888865432 2233344444444444454332 2344455667777777765
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
. ++. +..| .++++.+.++. ......|.+.|...++.+..++. |..
T Consensus 304 ~-g~~-~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~L~~~gi~v~~~~~------~~~--------- 348 (385)
T TIGR01825 304 L-GYD-TGGS-----------------ETPITPVVIGD-EKAAQEFSRRLFDEGIFAQSIVF------PTV--------- 348 (385)
T ss_pred c-CCC-CCCC-----------------CCCEEEEEECC-HHHHHHHHHHHHHCCcEEcccCC------CCC---------
Confidence 3 221 1111 13466666643 22345666666444665542211 100
Q ss_pred HHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 498 ERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
....+.||+++.. |+.+++++.|++.++
T Consensus 349 -----~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~ 380 (385)
T TIGR01825 349 -----PRGTARIRNIPTAEHTKDDLDQALDAYEKVGK 380 (385)
T ss_pred -----CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 0124689998864 344455555555543
No 166
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.89 E-value=4.7e-21 Score=203.82 Aligned_cols=284 Identities=18% Similarity=0.174 Sum_probs=194.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 276 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dl 276 (532)
.++...+|+++||+++|.+++++++||++|+..++..+.+ +++.|+.....|.+.... +...++++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~----~~~~~~~~~~~~~~d~ 164 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEG----IRRSRCEKHIFRHNDV 164 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH----HHHcCCcEEEECCCCH
Confidence 4788999999999999988899999999998888887754 777777666566554332 2334666666777788
Q ss_pred HHHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-c------c--ccccCCcEEEE
Q 009523 277 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-Q------K--ALSLGADLVLH 344 (532)
Q Consensus 277 e~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~------~--~l~~gaDivv~ 344 (532)
+++++.++. .++++|++++|+||+|.+.|+++|.++|+++|+++|+||+++.+.. . . ......|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~ 244 (407)
T PRK09064 165 AHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEG 244 (407)
T ss_pred HHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEE
Confidence 888888752 2689999999999999999999999999999999999999863321 0 1 11124589999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHhCC
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLHL---RVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l~l~~l~tl~~---r~~~~~~~a~~la~~L~~~p 419 (532)
|++|.+|.. ||++++++++++.++..... +....++..+..++..++.+.. ..++..++.+++.+.|++.
T Consensus 245 t~sKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~- 319 (407)
T PRK09064 245 TLAKAFGVM----GGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA- 319 (407)
T ss_pred ecchhhhcc----CceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-
Confidence 999999865 58899999988887654432 2334566666666666655432 2455667778888888764
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccccccCCCHHH
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSE 498 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~ 498 (532)
++. .++ ..++++.+.+++ ...+..+.+.|. ..++.+.... .|.. +
T Consensus 320 g~~-----~~~-------------~~~~iv~i~~~~-~~~~~~l~~~L~~~~gi~v~~~~------~p~~------~--- 365 (407)
T PRK09064 320 GIP-----VMP-------------NESHIVPVMVGD-PEKCKKASDMLLEEHGIYVQPIN------YPTV------P--- 365 (407)
T ss_pred CCC-----CCC-------------CCCCEEEEEeCC-HHHHHHHHHHHHHhCCEEEeeEC------CCCC------C---
Confidence 221 111 125678887753 234556666653 3355554321 1110 0
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 499 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 499 ~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
...+.||||++..++++.++.+.++|+
T Consensus 366 -----~~~~~lRis~~~~~t~edi~~l~~~l~ 392 (407)
T PRK09064 366 -----RGTERLRITPTPFHTDEMIDHLVEALV 392 (407)
T ss_pred -----CCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 013579999997666555555555554
No 167
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.89 E-value=3.2e-21 Score=201.72 Aligned_cols=268 Identities=17% Similarity=0.170 Sum_probs=173.9
Q ss_pred CCCCchh-HHHHHHHHHhhh----C---C-CcEEEeCCH-HHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccC
Q 009523 196 GRYGNPT-TVVVEEKMSALE----G---A-ESTVIMASG-MSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 196 ~R~~~p~-~~~Le~~lA~l~----g---a-~~~i~~sSG-~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
.+|+++. ..+|++++++++ | . .+.|++++| ++++..++..+ +++||.|++++|+|.+... .++..
T Consensus 50 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~----~~~~~ 125 (357)
T TIGR03539 50 PGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEV----GALLA 125 (357)
T ss_pred CCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHH----HHHhc
Confidence 3455443 456777777765 3 2 245555555 59999888877 7999999999999986543 33456
Q ss_pred CcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-------ccc
Q 009523 265 GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKA 334 (532)
Q Consensus 265 Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-------~~~ 334 (532)
|.++..++ ++++++ +.++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ..+
T Consensus 126 g~~~~~v~--~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 199 (357)
T TIGR03539 126 GATPVAAD--DPTELD----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDP 199 (357)
T ss_pred CCEEeccC--ChhhcC----ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceec
Confidence 88877664 444332 236899999999999999997 55788889999999999999763211 111
Q ss_pred c----ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHH
Q 009523 335 L----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNST 407 (532)
Q Consensus 335 l----~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~ 407 (532)
. .....+++.|+||.++.+| .++||+++++++++.++..+...+...+......+...++. +....+...++
T Consensus 200 ~~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 278 (357)
T TIGR03539 200 RVCGGDHTGLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAAR 278 (357)
T ss_pred ccCCCccccEEEEeccccccCCCc-eeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 0 1123489999999997665 56899999999999888766555555555555544444432 22222333456
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
.+.+.+.|+++ ++. +..|. .|-++++.++.+ ...+.+.|...++.+..|..+. +
T Consensus 279 ~~~~~~~L~~~-g~~-~~~p~----------------~~~~~~~~~~~~---~~~~~~~l~~~gV~v~pg~~f~----~- 332 (357)
T TIGR03539 279 RAQLKPALEKA-GFR-IDHSE----------------AGLYLWATRGED---AWDTVDRLAELGILVAPGDFYG----P- 332 (357)
T ss_pred HHHHHHHHHHc-CCC-CcCCC----------------ccEEEEEECCCC---HHHHHHHHHhCCEEECCccccC----C-
Confidence 66677777764 221 21111 244677776532 3345555555677777664321 0
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVE 516 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~e 516 (532)
-.+++||||++.+
T Consensus 333 ----------------~~~~~iRis~~~~ 345 (357)
T TIGR03539 333 ----------------AGSQHVRVALTAT 345 (357)
T ss_pred ----------------CCCCeEEEEecCC
Confidence 0247999999973
No 168
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=6.5e-21 Score=206.74 Aligned_cols=288 Identities=15% Similarity=0.128 Sum_probs=198.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
..+...+||++||++++.++.+++++|..++..++.+++++||.|++....|.++.. .+...+.++.+++.+|.++
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~----~~~ls~~~~~~~~~nd~~~ 227 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQN----GLYLSRSTIVYFKHNDMES 227 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHH----HHHHcCCeEEEECCCCHHH
Confidence 356789999999999999889999999888999999999999999988776655432 2333467888888888887
Q ss_pred HHHhhcC--------CCe-eEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-------cccc---cCC
Q 009523 279 LEAALNN--------NNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS---LGA 339 (532)
Q Consensus 279 Le~al~~--------~~t-klV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~-------~~l~---~ga 339 (532)
++..+++ .++ ++|++|+++|++|.+.|+++|.++|++||+++|+||++..+..- .... ...
T Consensus 228 l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~ 307 (481)
T PLN02822 228 LRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKI 307 (481)
T ss_pred HHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCC
Confidence 7766531 124 79999999999999999999999999999999999998643211 1111 246
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKI 414 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~ 414 (532)
|+++.|++|.+|.. ||++++++++++.++... ..+++.+++..+..++.+++.+ ...+++..++.+.+.+.
T Consensus 308 dii~~s~sKalg~~----GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~ 383 (481)
T PLN02822 308 DIITAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKG 383 (481)
T ss_pred eEEEecchhhhhhC----CeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 89999999999854 589999999988876432 2344455566555555555443 34556667788888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcC-CCceeecCCCcccccccC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALK-IPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~p 486 (532)
|++.+++. +..| +.+.++.+.+++. ......|.+.|- ..++.++.+.. |
T Consensus 384 L~~~~g~~-~~~~----------------~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~------~ 440 (481)
T PLN02822 384 LSDIPGLS-IGSN----------------TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKR------S 440 (481)
T ss_pred HHhcCCcc-cCCC----------------CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCC------C
Confidence 87654332 1111 1356888888531 122456777763 55777665422 1
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
.. ..+-.+..+|+++....+++.|+.+.++|
T Consensus 441 ~~------------~~~~~~~~lRi~is~~~t~edI~~~~~~l 471 (481)
T PLN02822 441 TL------------DKCRLPVGIRLFVSAGHTESDILKASESL 471 (481)
T ss_pred Cc------------CCCCCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 10 00111346999887655444444444444
No 169
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.89 E-value=3e-21 Score=202.35 Aligned_cols=260 Identities=18% Similarity=0.178 Sum_probs=171.8
Q ss_pred HHHHHHHHHhhh----C---C-CcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 203 TVVVEEKMSALE----G---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 203 ~~~Le~~lA~l~----g---a-~~~i~~sSG~-~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
..+|++++++++ | . ++.|++++|+ +++..++..+ +++||+|++++|+|.... ..+...|+++..++
T Consensus 64 ~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~ 139 (364)
T PRK07865 64 TPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYE----VGARLAGATVVRAD 139 (364)
T ss_pred CHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHH----HHHHhcCCEEEecC
Confidence 456777777765 3 2 3456666665 8998877777 799999999999998754 33455688887765
Q ss_pred CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----ccc-------ccC
Q 009523 273 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-------SLG 338 (532)
Q Consensus 273 ~~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~l-------~~g 338 (532)
++++++. . ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|...... ..+ ...
T Consensus 140 --~~~~l~~---~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 213 (364)
T PRK07865 140 --SLTELGP---Q-RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHT 213 (364)
T ss_pred --ChhhCCc---c-cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccc
Confidence 3444432 3 6899999999999999988 467888899999999999997743211 111 112
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 415 (532)
..+++.|+||.++.+| .++||+++++++++.++......+...+......+...++. +....+...++...+.+.|
T Consensus 214 ~~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (364)
T PRK07865 214 GLLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPAL 292 (364)
T ss_pred eEEEEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999997655 56899999999999888766555555566555554444432 2233334446666677777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
+++ ++. +..|. .|.++|+.++.+ ...+.+.+...++.+..|..+. +.
T Consensus 293 ~~~-g~~-~~~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gv~v~pg~~f~----~~-------- 339 (364)
T PRK07865 293 EAA-GFR-VDHSE----------------AGLYLWATRGED---CWDTVAWLAERGILVAPGDFYG----PA-------- 339 (364)
T ss_pred HHc-CCc-ccCCC----------------ccEEEEEeCCCC---HHHHHHHHHHCCEEEeCccccC----cC--------
Confidence 764 221 21111 244677776432 2344455555677776664321 00
Q ss_pred HHHHHhcCCCCCeEEEEecC
Q 009523 496 QSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~ 515 (532)
.++++||+++.
T Consensus 340 ---------~~~~iRi~~~~ 350 (364)
T PRK07865 340 ---------GAQHVRVALTA 350 (364)
T ss_pred ---------CCCEEEEEecC
Confidence 24789999986
No 170
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.89 E-value=7.3e-22 Score=203.69 Aligned_cols=176 Identities=19% Similarity=0.244 Sum_probs=150.0
Q ss_pred HHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccCCC----EEEEcCCCCcchHHH
Q 009523 184 DFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGG----HIVTTTDCYRKTRIF 256 (532)
Q Consensus 184 ~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al-l~~Gd----~VIv~~~~y~~t~~~ 256 (532)
.++.+++.. .|++...+..++.|+.+|++.|++ +.+|++++|++++++++.+ ...+| +||+...+|++....
T Consensus 69 ~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s 147 (428)
T KOG1549|consen 69 EYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDS 147 (428)
T ss_pred HhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHH
Confidence 344555544 688888888999999999999984 5555666679999999987 44677 999999999987765
Q ss_pred HHHhcccCCcEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-C
Q 009523 257 IETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-L 330 (532)
Q Consensus 257 ~~~~l~~~Gv~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~ 330 (532)
+ ..++..|+++++++.. |++.++++|++ +|++|.+.+.+|..|.++|+++|.++|+++|+.+++|.+++.+ .
T Consensus 148 ~-~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~-~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i 225 (428)
T KOG1549|consen 148 C-RALQEEGLEVTYLPVEDSGLVDISKLREAIRS-KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI 225 (428)
T ss_pred H-HHHHhcCeEEEEeccCccccccHHHHHHhcCC-CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc
Confidence 5 4567778999998754 78999999998 8999999999999999999999999999999999999998876 5
Q ss_pred cccccccCCcEEEECCccccCCCCCcEEEEEEeCh
Q 009523 331 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 365 (532)
Q Consensus 331 ~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~ 365 (532)
..+..++++|++..|+||++|+++ .|+++.++
T Consensus 226 ~vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 226 PVDVQELNADFLSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred cccHHHcCchheeeecccccCCCc---ceEEEEcc
Confidence 678889999999999999999997 68888775
No 171
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=6.4e-21 Score=202.11 Aligned_cols=280 Identities=15% Similarity=0.145 Sum_probs=184.6
Q ss_pred chhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 200 NPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~g--------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
......+++.++++++ .++.++++++++++..++.+++++||.|++++|+|..... .++..|+++.++
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~----~~~~~g~~v~~v 147 (394)
T PRK06836 72 NAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRF----YVDNHGGKLVVV 147 (394)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEE
Confidence 3556678888888764 2345666666799999999999999999999999988543 345678888887
Q ss_pred CC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHh------CCCEEEEECCCCCCCcc----
Q 009523 272 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ---- 332 (532)
Q Consensus 272 d~------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~------~gi~lIvDet~a~~~~~---- 332 (532)
+. .|++++++++++ ++++|++++|+||||.++| +++|+++|++ ||+++|+|++|......
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~ 226 (394)
T PRK06836 148 PTDTDTFQPDLDALEAAITP-KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEV 226 (394)
T ss_pred ecCCccCcCCHHHHHhhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCC
Confidence 54 268999999977 7999999999999999998 5567777888 89999999998643210
Q ss_pred cc-c-ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHH------HHHHhhhcC-CCccHHHHHHHHHhHHHHHHHHHH
Q 009523 333 KA-L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ------IRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQ 403 (532)
Q Consensus 333 ~~-l-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~------l~~~~~~~G-~~~~~~~a~l~l~~l~tl~~r~~~ 403 (532)
.. . .....+++.|+||.++.+| .+.|++++++++.+. +.......+ ...+......+.+.++.. .+.+.
T Consensus 227 ~~~~~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~ 304 (394)
T PRK06836 227 PYIFKYYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSI 304 (394)
T ss_pred CChHHccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHH
Confidence 00 1 1234689999999998665 467899988765432 111122222 233444444444444331 22334
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~ 483 (532)
..++.+.+.+.|+++ ++ .+..|. .|..+|+.++.. ....+.+.+...++.+..|..+.
T Consensus 305 ~~~~r~~l~~~L~~~-g~-~~~~~~----------------gg~~~~~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~-- 362 (394)
T PRK06836 305 YKRNRDLLYDGLTEL-GF-ECVKPQ----------------GAFYLFPKSPEE--DDVAFCEKAKKHNLLLVPGSGFG-- 362 (394)
T ss_pred HHHHHHHHHHHHHhC-CC-EeecCC----------------ceEEEEEeCCCC--CHHHHHHHHHhCCEEEECchhcC--
Confidence 456667777888775 23 222221 355778777641 23455566666677776664321
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH---HHHHHHHHHh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED---LKADVLQALH 530 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~d---li~dL~~AL~ 530 (532)
.++++||+++. +.++ .++.|.++++
T Consensus 363 ---------------------~~~~iRi~~~~-~~~~~~~~i~~l~~~l~ 390 (394)
T PRK06836 363 ---------------------CPGYFRLSYCV-DTETIERSLPAFEKLAK 390 (394)
T ss_pred ---------------------CCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 13689999984 4433 3445555554
No 172
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.89 E-value=4.9e-21 Score=200.46 Aligned_cols=282 Identities=15% Similarity=0.118 Sum_probs=188.0
Q ss_pred CCCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+.+....|+++||++++.+ +.|++++| ++++..++.++. +||.|++++|+|.... ..++..|+++..++.
T Consensus 52 ~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~----~~~~~~g~~~~~v~~ 126 (360)
T PRK07392 52 RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYR----RALRAFGATVKELPL 126 (360)
T ss_pred hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHH----HHHHHcCCeEEEEec
Confidence 4456666778999999999763 34555555 599999888764 6899999999998754 345557887777653
Q ss_pred C----------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc----cc---cc
Q 009523 274 A----------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS 336 (532)
Q Consensus 274 ~----------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~----~~---l~ 336 (532)
+ +++++++.. + +++++++++|+||||.+++.++|.++++++++ +|+||+|...... .. ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~ 203 (360)
T PRK07392 127 PLDQPSPGLTLRLQTLPPQL-T-PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA 203 (360)
T ss_pred ccccCCcccccCHHHHHHhc-c-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh
Confidence 2 345554443 2 58999999999999999999999999999985 6669997654211 11 11
Q ss_pred -cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHH
Q 009523 337 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMA 412 (532)
Q Consensus 337 -~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la 412 (532)
....+++.|+||.++-+| ++.||+++++++++.+..... ....+....+++...++. .....+...++++.+.
T Consensus 204 ~~~~vi~i~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 204 EYPNLIILRSLTKFYSLPG-LRLGYAIAHPDRLQRWQQWRD--PWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALF 280 (360)
T ss_pred cCCCEEEEEechhhhcCCc-hheeeeeCCHHHHHHHHhhCC--CCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 123589999999998555 468999999988888776543 234556655555544442 1111233445667777
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH-cCCCceeecCCCcccccccCccccc
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~-L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
+.|+.++++. + +|+ .|.+++++++. ....+.+. ++..++.+..|..+.
T Consensus 281 ~~L~~~~~~~-~-~~~----------------~~~fl~~~~~~---~~~~l~~~ll~~~gv~v~pg~~f~---------- 329 (360)
T PRK07392 281 QGLASLPGLT-P-LPS----------------AANFLLVQSQG---SALQLQEKLLQQHRILIRDCLSFP---------- 329 (360)
T ss_pred HHHHhCCCcE-E-CCC----------------CCCEEEEEcCC---CHHHHHHHHHhhCCEEEEeCCCCC----------
Confidence 8887765543 2 221 36678888764 23445544 344577777764421
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHh
Q 009523 492 WDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQALH 530 (532)
Q Consensus 492 ~~~~~~~~~~~gi~~~~IRlSvG~ed-~~dli~dL~~AL~ 530 (532)
+..+++|||+++..+ .+++.+.|++.+.
T Consensus 330 -----------~~~~~~iRi~~~~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 330 -----------ELGDRYFRVAVRTEAENQRLLEALAAILA 358 (360)
T ss_pred -----------CCCCCEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 012579999999854 4666666665543
No 173
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=1.1e-20 Score=199.21 Aligned_cols=304 Identities=20% Similarity=0.185 Sum_probs=205.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
.+...+||+++++++|.+++++++||++|+.+++.++ +++||+|+++.++|.++.. .+...|++++++|.
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~----~~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATAN----CALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH----HHHHcCCEEEEEecCCCcC
Confidence 5778999999999999998999999999999999998 8999999999999987653 34567888888865
Q ss_pred -CCHHHHHHhhc----CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCC----cEEEE
Q 009523 274 -ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA----DLVLH 344 (532)
Q Consensus 274 -~dle~Le~al~----~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~ga----Divv~ 344 (532)
.|+++++++++ + +|++|++ +|++|...|+++|.++|+++|+++|+|++++.+...+....|. |++++
T Consensus 104 ~~d~~~l~~~i~~~~~~-~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGK-LPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CcCHHHHHHHhhcccCC-CceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEE
Confidence 27899999998 5 6899886 5678999999999999999999999999987654333334455 99999
Q ss_pred CCc--cccCCCCCcEEEEEEe-ChHHHHHHHHHhhh-------------------------cCCCccHHHHHHHHHhHHH
Q 009523 345 SAT--KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV-------------------------LGGALNPNAAYLIIRGMKT 396 (532)
Q Consensus 345 S~s--K~lgg~gd~~gG~lv~-~~~li~~l~~~~~~-------------------------~G~~~~~~~a~l~l~~l~t 396 (532)
|+| |+++.+ .||+++. ++++.++++..+.. ++..++...+.+.+..++.
T Consensus 180 S~~~~K~~~~~---~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~ 256 (380)
T TIGR03588 180 SFHPVKIITTA---EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK 256 (380)
T ss_pred ecCCCCccccc---CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHH
Confidence 987 888754 3676665 45676666543210 1123455666666777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCceeec
Q 009523 397 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPS 475 (532)
Q Consensus 397 l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~~~~~~~~l~~L~~~~i~vs 475 (532)
+..+.++..++++++.+.|.+.|.+. +..+...... ...+..+.++. .......+.+.|+..+|.+.
T Consensus 257 l~~~~~~r~~~~~~~~~~L~~~~~~~-~~~~~~~~~~-----------~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~ 324 (380)
T TIGR03588 257 LDRFVAKRREIAARYDRLLKDLPYFT-PLTIPLGSKS-----------AWHLYPILLDQEFGCTRKEVFEALRAAGIGVQ 324 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-CCCCCCCCEe-----------EEEEEEEEECCcCCCCHHHHHHHHHHCCCCcc
Confidence 88888888999999999998877553 1111100000 01123333431 11234556666655566555
Q ss_pred CCCcccccccCcccc---ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 476 FGGCESIVDQPAIMS---YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 476 ~G~~~sl~~~pa~~s---~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..- ..+..+|.... ...++..+. +....|+|.++..-.++.++.+.+++++
T Consensus 325 ~~~-~~~~~~~~~~~~~~~~~~p~a~~----~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 325 VHY-IPVHLQPYYRQGFGDGDLPSAEN----FYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred cCC-cccccChhhhccCCcCCCcHHHH----HHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 331 12222222111 111222111 2357899988865555666667666654
No 174
>PRK10534 L-threonine aldolase; Provisional
Probab=99.89 E-value=8.5e-21 Score=196.27 Aligned_cols=253 Identities=15% Similarity=0.178 Sum_probs=172.4
Q ss_pred CCC-CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC-CcEEEEeCC
Q 009523 196 GRY-GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDP 273 (532)
Q Consensus 196 ~R~-~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~-Gv~v~~vd~ 273 (532)
.+| ++|...+|+++||+++|.+..+++++|++++..++.+++.+||+|+++.+.|...+... ..... ++++..++.
T Consensus 28 ~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 105 (333)
T PRK10534 28 DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG--GAAVLGSIQPQPIDA 105 (333)
T ss_pred cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC--chHHhcCceEEeecC
Confidence 466 79999999999999999988899999999999888889999999999887774322110 01122 245555532
Q ss_pred -----CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHH---HHHHHHhCCCEEEEECCCCCC------Ccccc
Q 009523 274 -----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATP------LNQKA 334 (532)
Q Consensus 274 -----~dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~---I~~la~~~gi~lIvDet~a~~------~~~~~ 334 (532)
.|+++|+++++++ ++++|++++|+ +|.+.|.++ |.++|+++++++++||+|... .....
T Consensus 106 ~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~ 183 (333)
T PRK10534 106 AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKE 183 (333)
T ss_pred CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHH
Confidence 2789999988652 48999999766 599998665 566788999999999985421 01111
Q ss_pred cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCcc--HHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 009523 335 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRMA 412 (532)
Q Consensus 335 l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~--~~~a~l~l~~l~tl~~r~~~~~~~a~~la 412 (532)
.....|.++.|+||.++.. +||++++++++++.++......+...+ ...+..+...++....++++..++++++.
T Consensus 184 ~~~~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~ 260 (333)
T PRK10534 184 ITQYCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLA 260 (333)
T ss_pred HHhcCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1123466677999988853 466888999999999877765553332 23344444455544456666667788899
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 476 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~ 476 (532)
+.|+++ ++. + +|. .++++++.+++ .....+.+.|...|+.+..
T Consensus 261 ~~L~~~-g~~-~-~~~----------------~~nfv~~~~~~--~~~~~~~~~l~~~gi~v~~ 303 (333)
T PRK10534 261 EQLREA-GAD-V-MRQ----------------DTNMLFVRVGE--EQAAALGEYMRERNVLINA 303 (333)
T ss_pred HHHHhC-CCc-c-CCC----------------CceEEEEECCc--hhHHHHHHHHHHcCeeecC
Confidence 999875 331 2 221 26688888863 2344555666666666544
No 175
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=9.1e-21 Score=197.68 Aligned_cols=284 Identities=21% Similarity=0.222 Sum_probs=215.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+.+.+||++||+++|.+.+++|+||-.|+..++.+++++||.|+.....|.+... ..+..+.++..+..+|+++|
T Consensus 83 ~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiid----G~rls~a~~~~f~HnD~~~L 158 (388)
T COG0156 83 SDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIID----GIRLSRAEVRRFKHNDLDHL 158 (388)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHH----HHHhCCCcEEEecCCCHHHH
Confidence 47889999999999999999999999999999999999999999999999987543 34455678888899999999
Q ss_pred HHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc-------cc---ccCCcEEEE
Q 009523 280 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------AL---SLGADLVLH 344 (532)
Q Consensus 280 e~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~-------~l---~~gaDivv~ 344 (532)
|+.+++. +.++|++|+..+..|.+.|+++|++++++||++++|||+++.++.-. .. ....||++.
T Consensus 159 e~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~g 238 (388)
T COG0156 159 EALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVG 238 (388)
T ss_pred HHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEE
Confidence 9999762 25899999999999999999999999999999999999987664321 11 122489999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCC
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p 419 (532)
|++|.||. +||++.++..+++.++... ..+...++|..+..+...++.+ ..+.++..++...+.+.+....
T Consensus 239 TlsKAlGs----~Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~ 314 (388)
T COG0156 239 TLGKALGS----SGGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALG 314 (388)
T ss_pred Echhhhcc----cCceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999995 4799999999999887643 3567778888766666666554 4566666677766664444321
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHH
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
++..++ ...++.+.+. +...+..+.+.|...++.++. +..|.. |
T Consensus 315 ------~~~~~s-------------~s~I~pv~~g-d~~~a~~~s~~l~~~Gi~v~~------i~~PTV------p---- 358 (388)
T COG0156 315 ------LVLLPS-------------ESPIIPVILG-DEERALEASRALLEEGIYVSA------IRPPTV------P---- 358 (388)
T ss_pred ------CccCCC-------------CCCeeeeEeC-CHHHHHHHHHHHHHCCeeEee------ecCCCC------C----
Confidence 111111 2457888774 445566666666554655443 233431 1
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 500 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.....||+++...++++.|+.+.++|.+
T Consensus 359 ----~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 359 ----KGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred ----CCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 1235799999999999999999999875
No 176
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=1.3e-20 Score=194.13 Aligned_cols=289 Identities=17% Similarity=0.177 Sum_probs=196.6
Q ss_pred CCCCCchhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga--------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
+.....+...++++.++++++. ++.+++++|++++..++.++.++||+|+++.+.|.+... .++..|.
T Consensus 30 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~----~~~~~~~ 105 (350)
T cd00609 30 LGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA----AARLAGA 105 (350)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHCCC
Confidence 3444556677788888877653 356777888899999999999999999999999998654 3445677
Q ss_pred EEEEeCCC-----CH--HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHH---HHHHHhCCCEEEEECCCCCCCc-----
Q 009523 267 TATVIDPA-----DM--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN----- 331 (532)
Q Consensus 267 ~v~~vd~~-----dl--e~Le~al~~~~tklV~lesP~NptG~v~dl~~I---~~la~~~gi~lIvDet~a~~~~----- 331 (532)
++..++.. +. +.++....+ ++++|++++|+||+|.+.|++++ .++|+++|+++|+|++++.+..
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~ 184 (350)
T cd00609 106 EVVPVPLDEEGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP 184 (350)
T ss_pred EEEEEecccccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc
Confidence 77777643 12 556666555 79999999999999999986655 4899999999999999765321
Q ss_pred ---ccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHH
Q 009523 332 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQ 403 (532)
Q Consensus 332 ---~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~ 403 (532)
......+.|+++.|++|+++.++ ..+|++++++ ++.+.++..........+...+..+...++. +....++
T Consensus 185 ~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 263 (350)
T cd00609 185 PALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRER 263 (350)
T ss_pred ccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 12334578999999999998333 3578999888 7888887766554444455544444444433 3333445
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~ 483 (532)
..++++++.+.|++++.... .. ...|.++++.+++. .....+.+.++..++.+..++.+..
T Consensus 264 ~~~~~~~l~~~L~~~~~~~~-~~----------------~~~g~~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~~- 324 (350)
T cd00609 264 YRRRRDALLEALKELGPLVV-VK----------------PSGGFFLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFGE- 324 (350)
T ss_pred HHHHHHHHHHHHHhcCCccc-cC----------------CCccEEEEEecCCC-ChHHHHHHHHHhCCEEEeccccccc-
Confidence 56778888888887654321 11 12467888888653 2333445555555666665533210
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.....||++++.. ++.++.+.++|+
T Consensus 325 --------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 325 --------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred --------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1357899999998 444555555554
No 177
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=2.5e-20 Score=196.66 Aligned_cols=210 Identities=20% Similarity=0.253 Sum_probs=165.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
..|...+||+++|+++|.+.+++++||++|+.+++.++ +++||+||+++++|.++... +...|++++++|.
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~----~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNM----IVLLGATPVMVDVDRDT 106 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHH----HHHcCCEEEEEecCCCc
Confidence 46889999999999999999999999999999999999 89999999999999987643 3456888888864
Q ss_pred --CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc---ccccCCcEEEECCcc
Q 009523 274 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLHSATK 348 (532)
Q Consensus 274 --~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~---~l~~gaDivv~S~sK 348 (532)
.|++++++++++ +|++|+ |+|++|.+.|+++|.++|+++|+++|+|++++.+.... ....|.+++.++.+|
T Consensus 107 ~~~d~~~l~~~i~~-~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAITP-RTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhccc-CCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 278999999987 799987 57789999999999999999999999999987543322 234566666666678
Q ss_pred ccCCCCCcEEEEEEeC-hHHHHHHHHHhhh----------------------cC--CCccHHHHHHHHHhHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQ 403 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~----------------------~G--~~~~~~~a~l~l~~l~tl~~r~~~ 403 (532)
.+.++ .||+++.+ +++.++++..+.. .| ..++.+.+.+.+..++.++...++
T Consensus 183 ~l~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NITCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 88654 37888875 6777777653310 01 124455677777778888888888
Q ss_pred HHHHHHHHHHHHHhCC
Q 009523 404 QNSTALRMAKILEAHP 419 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p 419 (532)
..++++++.+.|++.+
T Consensus 260 r~~~a~~~~~~L~~~~ 275 (379)
T PRK11658 260 RREIAARYLQALADLP 275 (379)
T ss_pred HHHHHHHHHHHhcCCC
Confidence 8888888888888765
No 178
>PRK07908 hypothetical protein; Provisional
Probab=99.89 E-value=1.2e-20 Score=196.63 Aligned_cols=276 Identities=16% Similarity=0.162 Sum_probs=182.9
Q ss_pred CCCCc-hhHHHHHHHHHhhhCC-CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 196 GRYGN-PTTVVVEEKMSALEGA-ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 196 ~R~~~-p~~~~Le~~lA~l~ga-~~~i~~sS-G~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
..|+. .....|++++|+++|. ++.|++++ +++++..++. +++| .+++..|+|.... ..++..|+++..++
T Consensus 52 ~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~ 124 (349)
T PRK07908 52 AAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVV 124 (349)
T ss_pred hcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeec
Confidence 34554 3577899999999986 33455555 4599988887 5675 5667789887643 34566788888776
Q ss_pred CC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc--c---cccCCcEE
Q 009523 273 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A---LSLGADLV 342 (532)
Q Consensus 273 ~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~--~---l~~gaDiv 342 (532)
.+ |++ .+++ +++++++++|+||||.+++.++|.++|++ +.++|+||+|...+... + ......++
T Consensus 125 ~~~~~~~d~~----~l~~-~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~ 198 (349)
T PRK07908 125 LDPPFRLDPA----AVPD-DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLV 198 (349)
T ss_pred cCcccCcChh----Hhcc-CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEE
Confidence 43 333 3344 68999999999999999999999999975 78899999976432111 1 12233578
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHh
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~-----l~tl~~r~~~~~~~a~~la~~L~~ 417 (532)
+.|+||.++.+| ++.|++++++++++.++.....+. .++.....+... .+.+....++..++++.+.+.|++
T Consensus 199 i~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 275 (349)
T PRK07908 199 LRSLTKTWSLAG-LRVGYALGAPDVLARLTRGRAHWP--VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA 275 (349)
T ss_pred EeecccccCCcc-ceeeeeecCHHHHHHHHhcCCCCC--ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999998555 468999999999988876544322 333332222222 223333344555667777888877
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
+ ++. +..|. .|.++|+.+++ ...+.+.++..++.+..|..+.
T Consensus 276 ~-~~~-~~~p~----------------~g~~~~~~~~~----~~~~~~~l~~~gI~v~~g~~f~---------------- 317 (349)
T PRK07908 276 V-GAR-VVDPA----------------AAPFVLVRVPD----AELLRKRLRERGIAVRRGDTFP---------------- 317 (349)
T ss_pred C-CcE-eccCC----------------CceEEEEECCc----HHHHHHHHHhCCEEEEECCCCC----------------
Confidence 6 432 32221 47789999874 2345555555577777765421
Q ss_pred HHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 498 ERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
+..+++||||++. ++.+.+++.|++.+.
T Consensus 318 -----~~~~~~vRis~~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 318 -----GLDPDYLRLAVRPRAEVPVLVQALAEILK 346 (349)
T ss_pred -----CCCCCeEEEEeCCCccHHHHHHHHHHHHh
Confidence 1135799999986 467778888877664
No 179
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=4.9e-21 Score=199.09 Aligned_cols=271 Identities=18% Similarity=0.202 Sum_probs=181.2
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+.||+++. ..|++++|+++|.. +.|++++|+ +++..+. .++++|| |+++.|+|.... ..++..|+++..+
T Consensus 48 ~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~-~~~~~g~-v~v~~P~y~~y~----~~~~~~g~~~~~v 120 (339)
T PRK06959 48 WRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP-ALLPRGR-VGIAPLAYSEYA----PAFARHGHRVVPL 120 (339)
T ss_pred HHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH-HhcCCCe-EEEcCCCcHHHH----HHHHHCCCEEEee
Confidence 45688887 99999999999973 567777776 8887654 4678887 888999998754 3455678888887
Q ss_pred CCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHH---HHhCCCEEEEECCCCCCCcccc---c-ccCCcEEEE
Q 009523 272 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQKA---L-SLGADLVLH 344 (532)
Q Consensus 272 d~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~l---a~~~gi~lIvDet~a~~~~~~~---l-~~gaDivv~ 344 (532)
+.++ +. +.+ +++++++++||||||.+.+.+++.++ |.+++.++|+||+|.......+ + ....-+++.
T Consensus 121 ~~~~-~~----~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~ 194 (339)
T PRK06959 121 DEAA-DT----LPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLR 194 (339)
T ss_pred cccc-hh----ccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEe
Confidence 7544 22 333 46899999999999999997776665 4578999999999876432111 1 112248999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v 421 (532)
|+||.+|.+| ++.||+++++++++.+++....++ .+.....++...++ ......++..++++++.+.|+++ ++
T Consensus 195 SfSK~~gl~G-lRiGy~v~~~~li~~l~~~~~~~~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~ 270 (339)
T PRK06959 195 SVGKFFGLAG-VRAGFVLAAPALLAALRDALGAWT--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GF 270 (339)
T ss_pred cChhhcCCcc-hheEEEecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 9999998665 468999999999999987665433 34444444444442 22333345556777788888875 22
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHh
Q 009523 422 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 501 (532)
Q Consensus 422 ~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~ 501 (532)
. + ++ .+.++++.++. ...+.+.|...|+.+.. +
T Consensus 271 ~-~-~~-----------------~~~f~~~~~~~----~~~l~~~l~~~GI~vr~--~---------------------- 303 (339)
T PRK06959 271 A-V-HA-----------------TPLFSWTDDPR----AAALHAALARRGIWTRY--F---------------------- 303 (339)
T ss_pred C-c-cC-----------------cceEEEEeCCC----HHHHHHHHHhCCeEEEE--C----------------------
Confidence 1 1 01 24567887652 24455666555665531 0
Q ss_pred cCCCCCeEEEEec-C-CCHHHHHHHHHHHHhh
Q 009523 502 YGIMDNLVRFSFG-V-EDFEDLKADVLQALHA 531 (532)
Q Consensus 502 ~gi~~~~IRlSvG-~-ed~~dli~dL~~AL~~ 531 (532)
+ ..++||||++ . ++.+.+++.|++.++.
T Consensus 304 -~-~~~~lRisi~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 304 -A-PPPSVRFGLPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred -C-CCCeEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 0 1358999994 4 4557777777766653
No 180
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.88 E-value=2.8e-20 Score=197.46 Aligned_cols=256 Identities=19% Similarity=0.226 Sum_probs=179.1
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCCcchHHHHHHh-------
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETV------- 260 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~---------~G-d~VIv~~~~y~~t~~~~~~~------- 260 (532)
..++...+|+++|+++.+.+.+++++||++|+..+++.+.. +| ++||+....|++........
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 80 FRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 45688899999999999988999999999999999987742 23 67888888877743222110
Q ss_pred --cccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCccc-
Q 009523 261 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK- 333 (532)
Q Consensus 261 --l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~~~- 333 (532)
.......+..++..|+++|++++.+ ++++|++|+|+||+|.+.| +++|.++|++||+++|+||++.. +...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g-~g~~g 237 (401)
T PRK00854 160 GGFGPFTPGFRVVPFGDAEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTG-LGRTG 237 (401)
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC-CCCCc
Confidence 1222345667788899999999987 7999999999999999997 99999999999999999999852 2211
Q ss_pred ------ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHH
Q 009523 334 ------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 405 (532)
Q Consensus 334 ------~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~ 405 (532)
.....+|+++. +|+++++. ..+|++++++++++.++..........++..+++++..++.+.. ..++..
T Consensus 238 ~~~~~~~~g~~~D~~~~--~K~l~gg~-~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~ 314 (401)
T PRK00854 238 KLLAEEHEGIEADVTLI--GKALSGGF-YPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAA 314 (401)
T ss_pred hHhHHhhcCCCCCEEEe--cccccCCc-cCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 22335688885 69998754 34788999998888775322211122477777777777776653 344455
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 474 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~v 474 (532)
++.+++.+.|++.... .+ ...++.|.++.+.+.++......|.+.|...++.+
T Consensus 315 ~~~~~l~~~L~~~~~~-~~---------------~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v 367 (401)
T PRK00854 315 EMGAYFLEGLRSIRSN-IV---------------REVRGRGLMLAVELEPEAGGARQYCEALKERGLLA 367 (401)
T ss_pred HHHHHHHHHHHhhccC-ce---------------EEEeccceEEEEEEecCchhHHHHHHHHHHCCeEE
Confidence 5666677777654210 00 01134678888887543334567777776555544
No 181
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=2.6e-20 Score=196.15 Aligned_cols=274 Identities=18% Similarity=0.134 Sum_probs=168.6
Q ss_pred CCCCCch-hHHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhccc
Q 009523 195 YGRYGNP-TTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPK 263 (532)
Q Consensus 195 Y~R~~~p-~~~~Le~~lA~l~----ga---~~~i~~sSG~-~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~~ 263 (532)
..+|+.+ ....|++++|+++ |. .+.|++++|+ +|+..++..++ ++||.|+++.|+|.... ..+..
T Consensus 53 ~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~ 128 (374)
T PRK05839 53 LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYE----GAAIA 128 (374)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhH----HHHHh
Confidence 3445544 2356666666543 52 3456566665 88888888764 57999999999998754 33456
Q ss_pred CCcEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc---c
Q 009523 264 MGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---Q 332 (532)
Q Consensus 264 ~Gv~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~---~ 332 (532)
.|+++..++.+ +++..+..+ + ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..... .
T Consensus 129 ~g~~v~~v~~~~~~~~~~d~~~~~~-~-~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~ 206 (374)
T PRK05839 129 SRAKVLLMPLTKENDFTPSLNEKEL-Q-EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPP 206 (374)
T ss_pred cCCEEEEeecccccCCcCCcchhhh-c-cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCC
Confidence 78888887643 122222233 3 5899999999999999998 45677778999999999999765321 1
Q ss_pred cc-c---------ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHH
Q 009523 333 KA-L---------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHL 399 (532)
Q Consensus 333 ~~-l---------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~ 399 (532)
.. . ..+.-+++.|+||.++.+| .+.||+++++++++.++......+...+......+...+. .+..
T Consensus 207 ~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 285 (374)
T PRK05839 207 PSLLEASILVGNESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEF 285 (374)
T ss_pred CCHhhhhcccCccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHH
Confidence 01 1 1134588999999987766 5789999999999988776554444444443333332221 1222
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCC
Q 009523 400 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGG 478 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~ 478 (532)
..++..++.+.+.+.| ++. .| ..|.++|+.++.. ..|.+.+. ..++.+..|.
T Consensus 286 ~~~~~~~~~~~~~~~l----~~~---~p----------------~gg~fi~~~~~~~----~~~~~~l~~~~gi~v~pg~ 338 (374)
T PRK05839 286 FRNIYAKNLKLAREIL----GIT---IP----------------PATFYVWLPVDND----EEFTKKLYQNEGIKVLPGS 338 (374)
T ss_pred HHHHHHHHHHHHHHhc----CCC---CC----------------CeeEEEEEeCCCh----HHHHHHHHHHCCEEEeCch
Confidence 2223333333333333 111 12 1477889998643 23444442 3577777764
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 522 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli 522 (532)
.+.. + +..++++|||++. +.+++.
T Consensus 339 ~f~~---~----------------~~~~~~iRis~~~-~~~~~~ 362 (374)
T PRK05839 339 FLGR---N----------------GIGKGYVRIALVY-DTPKLE 362 (374)
T ss_pred hhCC---C----------------CCCCCeEEEEecC-CHHHHH
Confidence 4210 0 1235899999986 344433
No 182
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=9.6e-21 Score=196.55 Aligned_cols=244 Identities=15% Similarity=0.178 Sum_probs=166.2
Q ss_pred CCCCCchhHHHHHHHHHhhhC---C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEE
Q 009523 195 YGRYGNPTTVVVEEKMSALEG---A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 269 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~g---a-~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~ 269 (532)
+++|+.+....|+++++++++ . ++.|++++|+ +++..++.++ |.|++.+|+|.... ..++..|+++.
T Consensus 50 ~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~----~~~~~~g~~~~ 121 (335)
T PRK14808 50 LRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYR----IFAKAVGAKFL 121 (335)
T ss_pred hhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHH----HHHHHcCCeEE
Confidence 466777788899999999997 3 3455555555 9999988877 78999999998744 44566788888
Q ss_pred EeCCCC---HHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---ccc-ccCCcEE
Q 009523 270 VIDPAD---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KAL-SLGADLV 342 (532)
Q Consensus 270 ~vd~~d---le~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~---~~l-~~gaDiv 342 (532)
.++.++ ++.. .+. ++++|++++|+||||.+.+.+++.+++ ++++++|+||+|...... ... .....++
T Consensus 122 ~v~~~~~~~~~~~--~~~--~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~ 196 (335)
T PRK14808 122 EVPLTKDLRIPEV--NVG--EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAV 196 (335)
T ss_pred EecCCCcCCCChh--Hcc--CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEE
Confidence 876531 1111 232 479999999999999999999999998 579999999997653211 111 1223588
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~p 419 (532)
+.|+||.++.+| .+.|++++++++++.+.......+ .+.....++...+ +.+..+.+...++.+.+.+.|++.
T Consensus 197 ~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~- 272 (335)
T PRK14808 197 IRTFSKAFSLAA-QRIGYVVSSEKFIDAYNRVRLPFN--VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM- 272 (335)
T ss_pred EEechhhccCcc-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 999999999555 467999999999998877653333 3344333333333 333444455556667778888775
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 475 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs 475 (532)
++. + +|. .|+++|+.+++. ....+.+.+...|+.+.
T Consensus 273 g~~-~-~~~----------------~g~f~~~~l~~~--~~~~~~~~l~~~Gi~V~ 308 (335)
T PRK14808 273 GYR-I-TDS----------------RGNFVFIFMEKE--EKERLLEHLRAKNIAVR 308 (335)
T ss_pred CCE-E-CCC----------------CCeEEEEeCCCc--cHHHHHHHHHHCCeEEE
Confidence 232 2 221 367899998742 22556666665566554
No 183
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.88 E-value=4.6e-20 Score=194.33 Aligned_cols=257 Identities=15% Similarity=0.133 Sum_probs=183.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---- 274 (532)
.+.++++++.++++.|.+++++++||++|+.+++.++ ++|||+||+++++|.++...+ ...|++++++|.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 5779999999999999999999999999999999887 899999999999999876433 4568888888743
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc--ccccCCcEEEECCc--c
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSAT--K 348 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~--~l~~gaDivv~S~s--K 348 (532)
|++++++++++ +|++|+ |+||+|...|+++|.++|+++|+++|+|++++.+...+ +...-.|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~-~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 106 NIDETLIESAITH-RTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETK 181 (376)
T ss_pred CCCHHHHHHhcCc-CceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCC
Confidence 68899999987 799986 67889999999999999999999999999977543222 23222378888875 5
Q ss_pred ccCCCCCcEEEEEEeC-hHHHHHHHHHhhh-------------------cC--CCccHHHHHHHHHhHHHHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNS 406 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~-------------------~G--~~~~~~~a~l~l~~l~tl~~r~~~~~~ 406 (532)
.+..++ .||+++.+ +++.++++..+.. .| ..++...+...+..++.++...++..+
T Consensus 182 ~l~~g~--~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~ 259 (376)
T TIGR02379 182 NYTSGG--EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLA 259 (376)
T ss_pred cCcccC--CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHH
Confidence 555332 26776654 7888887755431 11 224456677777888889888888888
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 476 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~ 476 (532)
++++..+.|.+.+....+..|..+....+ .-.++.+.++.. .....+++.|+..+|.+..
T Consensus 260 ~~~~y~~~L~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~-~~r~~l~~~L~~~gI~~~~ 319 (376)
T TIGR02379 260 TWQLYQDALKPLEEKGIIELPSIPNGCQH---------NAHMFYIKLKDE-DDRNELIKYLKEQEIMAVF 319 (376)
T ss_pred HHHHHHHHhccCCcCCeeeCCCCCCCCee---------eeEEEEEEECCc-CCHHHHHHHHHHCCCCccc
Confidence 88888888876542111223332211110 113556667532 2345667777766766554
No 184
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=3.3e-20 Score=197.99 Aligned_cols=221 Identities=19% Similarity=0.213 Sum_probs=153.6
Q ss_pred CCCCCCCC--CchhHHHHHH----HHHhhhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhccc
Q 009523 191 ASFEYGRY--GNPTTVVVEE----KMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 263 (532)
Q Consensus 191 ~~~~Y~R~--~~p~~~~Le~----~lA~l~ga~~~i~-~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~ 263 (532)
.++.++|+ |+|++++||+ ++++++|.+.+++ ++||+.|+..++.+++++||+|++++..|.+....- .....
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g-~~~~~ 136 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHG-AKVSL 136 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecC-Cccee
Confidence 45677887 7899999999 9999999999865 589999999999999999999999999998732100 00000
Q ss_pred CCcEE--EEeCC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-----
Q 009523 264 MGITA--TVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL----- 330 (532)
Q Consensus 264 ~Gv~v--~~vd~------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~----- 330 (532)
.+... ..++. .|++++++.++..++++|+++.+. +|...|+++|.++|+++|+++++|++++.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~ 214 (416)
T PRK13034 137 SGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGE 214 (416)
T ss_pred ccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCC
Confidence 11111 22222 589999998855468999986654 5788899999999999999999999955432
Q ss_pred cccccccCCcEEEECCccccCCCCCcEEEEEEeChH-HHHHHHHHhhh--cCCCccHHHHHHHHHhHHHH----HHHHHH
Q 009523 331 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL----HLRVQQ 403 (532)
Q Consensus 331 ~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~-li~~l~~~~~~--~G~~~~~~~a~l~l~~l~tl----~~r~~~ 403 (532)
...++. ++|++++|+||+++|+. ||+++++++ +.+.++..... .+....+..+.++...++.+ ..+.++
T Consensus 215 ~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~ 290 (416)
T PRK13034 215 HPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQ 290 (416)
T ss_pred CCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 223333 58999999999997764 688777654 44444443211 11222333333332222222 234577
Q ss_pred HHHHHHHHHHHHHhC
Q 009523 404 QNSTALRMAKILEAH 418 (532)
Q Consensus 404 ~~~~a~~la~~L~~~ 418 (532)
..++++++++.|++.
T Consensus 291 l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 291 VIANAQALAEVLKER 305 (416)
T ss_pred HHHHHHHHHHHHHHc
Confidence 778999999999876
No 185
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.88 E-value=3.9e-20 Score=193.70 Aligned_cols=258 Identities=17% Similarity=0.165 Sum_probs=173.6
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 201 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~----~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
...+++++.+++++|++ ..++++||+++++.++.+++.+||++++..+.+.+.. +...++..|++++.++.+
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~ 112 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEV 112 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 45677899999999984 2556788899999999999889888766555554432 224456778888877542
Q ss_pred ---CHHHHHHhhcCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCccc
Q 009523 275 ---DMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKF 349 (532)
Q Consensus 275 ---dle~Le~al~~~-~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~ 349 (532)
|+++++++++++ ++++|++.++.||||.+.|+++|.++||++|+++++|++++.+ .+.+...+++|+++.|++|+
T Consensus 113 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~ 192 (363)
T TIGR02326 113 EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKC 192 (363)
T ss_pred CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccc
Confidence 789999998753 4678888899999999999999999999999999999987643 23445567899999999999
Q ss_pred cCCCCCcEEEEEEeChHHHHHHHHHhh---------------hcC---CCccHHHHHHHHHhHHH------HHHHHHHHH
Q 009523 350 IGGHNDVLAGSISGSGKLVTQIRNLHH---------------VLG---GALNPNAAYLIIRGMKT------LHLRVQQQN 405 (532)
Q Consensus 350 lgg~gd~~gG~lv~~~~li~~l~~~~~---------------~~G---~~~~~~~a~l~l~~l~t------l~~r~~~~~ 405 (532)
++|+.+ .|+++.+++.++++..... ..+ .+.+....+.+..+++. +..+.++..
T Consensus 193 l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 193 IQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred cccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 865532 5889998887765431000 001 12233333333333332 234456666
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCC
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G 477 (532)
+++.++.+.|+++ ++..+..+.. ..+.+++|.++.. ......+.+.|+..++.++.|
T Consensus 271 ~~~~~l~~~L~~~-g~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g 328 (363)
T TIGR02326 271 QNQKTLVAGMRAL-GFEPLLDDEI--------------QSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPG 328 (363)
T ss_pred HHHHHHHHHHHHc-CCeeccCccc--------------CCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECC
Confidence 7778888888775 3322211110 1244677887642 123445666666667777655
No 186
>PRK06855 aminotransferase; Validated
Probab=99.88 E-value=4.8e-20 Score=197.85 Aligned_cols=232 Identities=14% Similarity=0.137 Sum_probs=146.5
Q ss_pred hhHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 201 PTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
....+||+.+|+++ |. +++++++++++|+..++. ++.+||.|++++|+|+.... . .....|+++..++
T Consensus 73 ~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~-~--~~~~~g~~~v~v~ 148 (433)
T PRK06855 73 KGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSS-A--EAAHAGYPPVTYR 148 (433)
T ss_pred CCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHH-H--HHHhcCCeEEEEe
Confidence 34566777777775 32 345555555699988875 78999999999999987331 1 1122355554443
Q ss_pred C-------CCHHHHHHhhcC-CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----cc---
Q 009523 273 P-------ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA--- 334 (532)
Q Consensus 273 ~-------~dle~Le~al~~-~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~--- 334 (532)
. .|+++|+++++. .+++++++++|+||||.+++ +++|+++|+++|++||+||+|...... .+
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~ 228 (433)
T PRK06855 149 LDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSE 228 (433)
T ss_pred cccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHH
Confidence 1 278999999863 25899999999999999998 456778899999999999997653211 11
Q ss_pred c-ccCCcEEEECCccccCCCCCcEEEEEEeC-----h---HHHHHHHHHhhhcCCCccHHHHHHHHHhHH------HHHH
Q 009523 335 L-SLGADLVLHSATKFIGGHNDVLAGSISGS-----G---KLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHL 399 (532)
Q Consensus 335 l-~~gaDivv~S~sK~lgg~gd~~gG~lv~~-----~---~li~~l~~~~~~~G~~~~~~~a~l~l~~l~------tl~~ 399 (532)
+ ..+..|++.|+||.++.+| .+.||++++ + .+++.+...... ....+.+.+.++.+.++ .+..
T Consensus 229 ~~~~~~~I~~~S~SK~~~~pG-lRiG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~ 306 (433)
T PRK06855 229 VIGDVPGIALKGISKELPWPG-SRCGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEYKNYLKE 306 (433)
T ss_pred HcCcCCeEEEecCccccCCCc-ceEEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcHHHHHHH
Confidence 1 1123489999999998665 468888862 2 223333222221 22234444444444442 2223
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 400 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
..+...++.+.+.+.|++++++. +..|. .|.++|+.+++
T Consensus 307 ~~~~~~~r~~~~~~~L~~~~~~~-~~~p~----------------gg~~~w~~l~~ 345 (433)
T PRK06855 307 RNKRYEKRSNIAYEKLKDVPGLK-VNRTN----------------GAFYMTVVFED 345 (433)
T ss_pred HHHHHHHHHHHHHHHHhcCCCee-ccCCC----------------eeEEEeecccc
Confidence 33344566667778887655432 22221 35678888874
No 187
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.88 E-value=1.6e-20 Score=200.34 Aligned_cols=299 Identities=15% Similarity=0.156 Sum_probs=182.2
Q ss_pred CCCchh-HHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHhcc-----CCCEEEE-cCCCCcchHHHHHH--
Q 009523 197 RYGNPT-TVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVP-----AGGHIVT-TTDCYRKTRIFIET-- 259 (532)
Q Consensus 197 R~~~p~-~~~Le~~lA~l~----g--a-~~~i~~sSG~-~Ai~~al~all~-----~Gd~VIv-~~~~y~~t~~~~~~-- 259 (532)
+|+++. ...|+++||+++ | . ++.|++++|+ +|+.+++.+++. +||.|++ ..|+|++.......
T Consensus 69 ~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~ 148 (416)
T PRK09440 69 NYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEED 148 (416)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccC
Confidence 455443 467888888876 3 2 2445555555 999999999885 6899999 69999875432210
Q ss_pred hcccCCcEEEEeC------CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 260 VLPKMGITATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 260 ~l~~~Gv~v~~vd------~~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
.+...+..+..++ ..|+++|+ +.+ +++++++++|+||||.+++ +++|+++|+++++++|+||+|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~ 225 (416)
T PRK09440 149 LFVSYRPNIELLPEGQFKYHVDFEHLH--IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF 225 (416)
T ss_pred ceeecccccccccccccccCCCHHHcc--cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC
Confidence 1122222222222 13677776 344 6899999999999999998 5678888999999999999997532
Q ss_pred cc----c--ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH--HHHH--
Q 009523 331 NQ----K--ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--LHLR-- 400 (532)
Q Consensus 331 ~~----~--~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t--l~~r-- 400 (532)
.. . +...+..|++.|+||+ +.+| .+.||+++++++++.+...........+.+...++...++. +...
T Consensus 226 ~~~~~~~~~~~~~~~vI~~~SfSK~-~~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 303 (416)
T PRK09440 226 PGIIFSEATPLWNPNIILCMSLSKL-GLPG-VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSE 303 (416)
T ss_pred CCcchhhcCccccCCeEEEeccccc-CCCc-ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHH
Confidence 11 1 1112345889999996 5554 67899999999999888766655555565555555554432 1111
Q ss_pred ---HHHHHHHHHHHHHHHHhC-CCce-EEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec
Q 009523 401 ---VQQQNSTALRMAKILEAH-PKVK-RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 475 (532)
Q Consensus 401 ---~~~~~~~a~~la~~L~~~-p~v~-~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs 475 (532)
.+...++...+.+.|+++ +.+. .+..|. .|.++|++++........|.+.+...++.+.
T Consensus 304 ~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~----------------gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~ 367 (416)
T PRK09440 304 TVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPE----------------GAIFLWLWFKDLPITTEELYQRLKARGVLVV 367 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCeEEecCC----------------CceEEEEECCCCCCCHHHHHHHHHHCCEEEe
Confidence 112234445566666654 2221 122221 4678899987411223456666656677887
Q ss_pred CCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 476 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 476 ~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
.|..+. +.. .. ......+++|||++. ++.++.++.|.++++
T Consensus 368 pg~~F~----~~~------~~----~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 368 PGHYFF----PGL------DE----DWPHAHQCIRMNYVQDDEEIEKGIAILAEEVE 410 (416)
T ss_pred chHhhC----CCC------cc----ccCCcCceEEEEecCCHHHHHHHHHHHHHHHH
Confidence 775532 100 00 000013689999974 334445555666554
No 188
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=5.1e-20 Score=193.09 Aligned_cols=287 Identities=18% Similarity=0.188 Sum_probs=190.5
Q ss_pred hhHHHHHHHHHhhhCCC---c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 201 PTTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
...+++++.+++++|++ + .++++||++++..++.++..+||+|++..+.|.+.. +...++..|+++..++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGED 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCC
Confidence 36788999999999974 3 446788899999999999999999999887776643 23456677888887764
Q ss_pred --CCHHHHHHhhcCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCccc
Q 009523 274 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKF 349 (532)
Q Consensus 274 --~dle~Le~al~~~-~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~ 349 (532)
.|+++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|+++..+ ...+...+++|+++.|++|+
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~ 194 (368)
T PRK13479 115 EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKC 194 (368)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccc
Confidence 3689999988642 4678999999999999999999999999999999999876443 23344456899999999998
Q ss_pred cCCCCCcEEEEEEeChHHHHHHHHHhhhc--------------C---CCccHHHHHHHHHhHHH------HHHHHHHHHH
Q 009523 350 IGGHNDVLAGSISGSGKLVTQIRNLHHVL--------------G---GALNPNAAYLIIRGMKT------LHLRVQQQNS 406 (532)
Q Consensus 350 lgg~gd~~gG~lv~~~~li~~l~~~~~~~--------------G---~~~~~~~a~l~l~~l~t------l~~r~~~~~~ 406 (532)
+.|+.+ .|+++.++++++.+......+ + .+.+....+.+..+++. +..+.++..+
T Consensus 195 l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~ 272 (368)
T PRK13479 195 IEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYAN 272 (368)
T ss_pred cccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 755432 499999998887765421100 1 12232222222223322 2344556667
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCccccccc
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl~~~ 485 (532)
.++.+.+.|+++ ++. +..+. .+ ..+.++.|.++... .....+.+.|...++.+..|...
T Consensus 273 ~~~~l~~~L~~~-g~~-~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~----- 332 (368)
T PRK13479 273 NQRTLVAGMRAL-GFE-PLLDA-----EI--------QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLT----- 332 (368)
T ss_pred HHHHHHHHHHHc-CCc-ccCCc-----hh--------cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCC-----
Confidence 777888888776 332 11111 10 12345667665321 23456777776667777554210
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEe-cC---CCHHHHHHHHHHHHh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSF-GV---EDFEDLKADVLQALH 530 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSv-G~---ed~~dli~dL~~AL~ 530 (532)
..+.+|+|. |. |+.+.+++.|+++++
T Consensus 333 -------------------~~~~iRis~~~~~t~edi~~~l~~L~~~l~ 362 (368)
T PRK13479 333 -------------------QVDTFRIGCIGDVDAADIRRLVAAIAEALY 362 (368)
T ss_pred -------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 135799985 63 334445555555554
No 189
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=6.9e-20 Score=199.38 Aligned_cols=281 Identities=13% Similarity=0.179 Sum_probs=174.1
Q ss_pred HHHHHHHHHhhhC--------C-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcc-cCCcEEEEe
Q 009523 203 TVVVEEKMSALEG--------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVI 271 (532)
Q Consensus 203 ~~~Le~~lA~l~g--------a-~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~-~~Gv~v~~v 271 (532)
...|+++||++++ . ++.|++++| ++|+..++.++++|||.|++++|.|++... .+. ..|+++..+
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~----~~~~~~G~~vv~v 171 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR----DLRWRTGVEIIPV 171 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH----HHHhhCCCEEEEE
Confidence 3567788887764 2 234555555 599999999999999999999999998543 233 468888777
Q ss_pred CC-------CCHHHHHHhhc-----CCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----c
Q 009523 272 DP-------ADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----Q 332 (532)
Q Consensus 272 d~-------~dle~Le~al~-----~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~ 332 (532)
+. .|+++++++++ ..++|+|++++|+||||.+++ +++|+++|+++|+++|+||+|+.... .
T Consensus 172 ~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~ 251 (496)
T PLN02376 172 PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDF 251 (496)
T ss_pred eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCc
Confidence 64 25777765532 126899999999999999998 45678889999999999999875321 1
Q ss_pred cc-ccc---------CCc--EEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---
Q 009523 333 KA-LSL---------GAD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--- 396 (532)
Q Consensus 333 ~~-l~~---------gaD--ivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t--- 396 (532)
.+ ... ..+ +++.|+||.||.+| .+.|+++++ +.+.+.++... .++. .+...++++...++.
T Consensus 252 ~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG-lRvG~li~~~~~l~~~~~~~~-~~~~-vs~~~Q~a~~~~L~d~~~ 328 (496)
T PLN02376 252 VSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG-FRVGIVYSFNDSVVSCARKMS-SFGL-VSSQTQLMLASMLSDDQF 328 (496)
T ss_pred ccHHHhhccccccccCCCeEEEEEeccccCCCCc-ceEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHHHHhCChhH
Confidence 11 001 112 46799999998666 468899885 45555544433 2332 444554444433322
Q ss_pred HHHH----HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH------HHHHHHHHH
Q 009523 397 LHLR----VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDA 466 (532)
Q Consensus 397 l~~r----~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~------~~~~~~l~~ 466 (532)
+... .++..+..+.+.+.|++. ++. +..| ..|.++|+.++... +....|.+.
T Consensus 329 ~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~-~~~~----------------~aG~flwi~l~~~~~~~~~~~~e~~l~~~ 390 (496)
T PLN02376 329 VDNFLMESSRRLGIRHKVFTTGIKKA-DIA-CLTS----------------NAGLFAWMDLRHLLRDRNSFESEIELWHI 390 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCC----------------CceEEEEEEchhhhccCCchhHHHHHHHH
Confidence 1111 223334455566677653 221 1111 14678999986311 122344444
Q ss_pred c-CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHH
Q 009523 467 L-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQAL 529 (532)
Q Consensus 467 L-~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dl---i~dL~~AL 529 (532)
+ +..++.++.|..+. . -.++++||+++..+.+++ ++.|.+++
T Consensus 391 ll~~~gV~v~pGs~F~----~-----------------~~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 391 IIDKVKLNVSPGSSFR----C-----------------TEPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred HHHcCCEEEeCccccC----C-----------------CCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 3 33578888875431 0 025799999996343444 44444444
No 190
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.87 E-value=1e-19 Score=188.97 Aligned_cols=288 Identities=17% Similarity=0.166 Sum_probs=190.6
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 201 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~----~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
+..+.+++.+++++|.+ ..+++++|++++..++.+++.+||++++..+.+.+.. +...++..|.++..++.
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 67889999999999974 2446789999999999999988888766655544421 22345667888777753
Q ss_pred --CCHHHHHHhhcCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCccc
Q 009523 274 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKF 349 (532)
Q Consensus 274 --~dle~Le~al~~~-~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~ 349 (532)
.|+++++++++++ ++++|++.+++|++|.+.|+++|.++|+++|+++|+|++++.+ ...+....++|+++.|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 2789999998642 4678888889999999999999999999999999999986543 23344456899999999999
Q ss_pred cCCCCCcEEEEEEeChHHHHHHHHHh---------------h--hcCCCccHHHHHHHHHhHHH------HHHHHHHHHH
Q 009523 350 IGGHNDVLAGSISGSGKLVTQIRNLH---------------H--VLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 406 (532)
Q Consensus 350 lgg~gd~~gG~lv~~~~li~~l~~~~---------------~--~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~ 406 (532)
++|+.+ .|++++++++++.++... . ....+.+....+.+...++. +..+.++..+
T Consensus 189 l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 266 (355)
T TIGR03301 189 LEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRR 266 (355)
T ss_pred cccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 865432 489999998887765210 0 01112333333333333332 3445556667
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCccccccc
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G~~~sl~~~ 485 (532)
+++.+.+.|+++ ++. +..|. . ...+.+++|.++.. ......+.+.|...++.++.|+..
T Consensus 267 ~~~~~~~~L~~~-g~~-~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~----- 326 (355)
T TIGR03301 267 NRELLVDGLRAL-GFQ-PLLPE--R-----------WQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT----- 326 (355)
T ss_pred HHHHHHHHHHHc-CCe-eecCC--C-----------CCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccc-----
Confidence 788888888775 333 22221 0 01244678888742 123446666666556666554210
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+.|||++.....++.++.+.++|++
T Consensus 327 -------------------~~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 327 -------------------LADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred -------------------cccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 126899998654445555666655543
No 191
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=4.7e-20 Score=198.41 Aligned_cols=284 Identities=15% Similarity=0.161 Sum_probs=180.8
Q ss_pred hHHHHHHHHHhhhC--------C-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 202 TTVVVEEKMSALEG--------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 202 ~~~~Le~~lA~l~g--------a-~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
....|++++|++++ . ++.|++++| ++|+.+++.+++.|||.|+++.|.|++....+ ..+.|++++.+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~---~~~~g~~vv~v 172 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL---RWRTGVKIVPI 172 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH---HhcCCcEEEEE
Confidence 35678888888764 1 233555555 59999999999999999999999998854322 12457777766
Q ss_pred CC-------CCHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----c
Q 009523 272 DP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----Q 332 (532)
Q Consensus 272 d~-------~dle~Le~al~~-----~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~ 332 (532)
+. .|++++++++++ .++|+|++++|+||||.+++ +++|.++|+++|+++|+||+|+.... +
T Consensus 173 ~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f 252 (447)
T PLN02607 173 HCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEF 252 (447)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 43 267888888753 36899999999999999998 66888889999999999999864221 1
Q ss_pred -cccc----------cCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----
Q 009523 333 -KALS----------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---- 396 (532)
Q Consensus 333 -~~l~----------~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---- 396 (532)
..+. ....+++.|+||.||.+| .+.|++++ ++++++.++.... ++. .+.....++...++.
T Consensus 253 ~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~~~~~~~~~-~~~-~s~~~q~~~~~~L~d~~~~ 329 (447)
T PLN02607 253 VSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSS-FTL-VSSQTQHLLASMLSDEEFT 329 (447)
T ss_pred ccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHHHHHHHHhh-cCC-CCHHHHHHHHHHhCCchhH
Confidence 1110 122478899999998666 56788887 6667676665432 222 233333333333321
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-----HHHHHHHHHc-
Q 009523 397 ---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-----TATIKFIDAL- 467 (532)
Q Consensus 397 ---l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-----~~~~~~l~~L- 467 (532)
+....++..++.+.+.+.|+++ ++. + .+ ...|.++|+.++... +...++.+.+
T Consensus 330 ~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~----~~------------~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll 391 (447)
T PLN02607 330 ENYIRTNRERLRKRYEMIVQGLRRA-GIE-C----LK------------GNAGLFCWMNLSPLLETPTREGELALWDSIL 391 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCC-c----cc------------CCeeEEEEEEchHhhcCCCchhHHHHHHHHH
Confidence 2222334445666677788764 232 1 11 114678899986311 2223444443
Q ss_pred CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009523 468 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 530 (532)
Q Consensus 468 ~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~---~dli~dL~~AL~ 530 (532)
+..++.+..|..+. . ..++++||+++..+. ++.++.|.++++
T Consensus 392 ~~~gV~v~pG~~f~----~-----------------~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~ 436 (447)
T PLN02607 392 REVKLNISPGSSCH----C-----------------SEPGWFRVCFANMSEDTLEVALKRIHRFMD 436 (447)
T ss_pred HhCCEEEcCccccC----C-----------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 34577777775421 0 136899999996333 444555555554
No 192
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.87 E-value=4.8e-20 Score=196.37 Aligned_cols=256 Identities=12% Similarity=0.100 Sum_probs=155.7
Q ss_pred CchhHHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE---
Q 009523 199 GNPTTVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--- 267 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~------ga-~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~--- 267 (532)
+.+....|++++|+++ +. ++.|++++|+ +++..+ ..++.+||+|++++|+|...... ++..|.+
T Consensus 74 ~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~----~~~~g~~~~~ 148 (409)
T PRK07590 74 PEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDT----NVMAGRTGEA 148 (409)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHH----HHHcCCcccc
Confidence 4455678899999875 22 3455555555 888875 45678999999999999886543 3344543
Q ss_pred --------EEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCcc----
Q 009523 268 --------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ---- 332 (532)
Q Consensus 268 --------v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~~---- 332 (532)
+..++.+.-+.+...+...++|+|++++|+||||.+++. ++|+++|+++|++||+||+|......
T Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~ 228 (409)
T PRK07590 149 NEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLP 228 (409)
T ss_pred cccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCC
Confidence 555554211112212222369999999999999999984 56778889999999999997643211
Q ss_pred ccc-cc----CCcEEEECCccccCCCCCcEEEEEEeChHHHHHH------------HHHhhhcCCCccHHHHHHHHHhH-
Q 009523 333 KAL-SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI------------RNLHHVLGGALNPNAAYLIIRGM- 394 (532)
Q Consensus 333 ~~l-~~----gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l------------~~~~~~~G~~~~~~~a~l~l~~l- 394 (532)
.++ .. ...+++.|+||.+|.+| .+.||+++++++++.+ ...........+...+.++...+
T Consensus 229 ~~~~~~~~~~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 307 (409)
T PRK07590 229 HSIYEIEGARECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS 307 (409)
T ss_pred cchhhCCCcccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc
Confidence 111 11 13478899999997555 5689999999888632 11111111223444433333222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CC
Q 009523 395 ----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KI 469 (532)
Q Consensus 395 ----~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~ 469 (532)
+.+....+...++.+.+.+.|+++ ++. +..| ..|.++|+.++.. .....|...+ +.
T Consensus 308 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~~----------------~g~~f~wi~~~~~-~~~~~~~~~l~~~ 368 (409)
T PRK07590 308 PEGKAQIKELIDYYMENAKIIREGLESA-GFE-VYGG----------------VNAPYIWVKTPDG-MSSWDFFDKLLQE 368 (409)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC----------------CcceEEEEECCCC-CCHHHHHHHHHHH
Confidence 223333444556677788888875 222 2111 1356889999753 1223444443 33
Q ss_pred CceeecCCCc
Q 009523 470 PYIAPSFGGC 479 (532)
Q Consensus 470 ~~i~vs~G~~ 479 (532)
.++.+..|..
T Consensus 369 ~gv~v~pg~~ 378 (409)
T PRK07590 369 ANVVGTPGSG 378 (409)
T ss_pred CCEEEeChhH
Confidence 4666666643
No 193
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.8e-20 Score=182.71 Aligned_cols=312 Identities=18% Similarity=0.231 Sum_probs=223.4
Q ss_pred ccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcC
Q 009523 169 VNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTT 247 (532)
Q Consensus 169 ~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~-~Gd~VIv~~ 247 (532)
.+|.|+..++.++.++..+...+.-.|+ -+|+..+||+.+|+++|.|..+|++||+.++.++++..+. +|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 5778888888887777777666666776 4689999999999999999999999999999998887764 899999999
Q ss_pred CCCcchHHHHHHhcccCCcEEEEeCC-----CCHHHHHHhhcCC-------CeeEEEEeCCCCCCC-cccCHH---HHHH
Q 009523 248 DCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-------NVSLFFTESPTNPFL-RCVDVK---LVSD 311 (532)
Q Consensus 248 ~~y~~t~~~~~~~l~~~Gv~v~~vd~-----~dle~Le~al~~~-------~tklV~lesP~NptG-~v~dl~---~I~~ 311 (532)
..|--.++.- .+....|+.++.+.. .|++++|++++.. .|++|.+|+-+|.+| .+.|++ +|.+
T Consensus 104 ~~HI~~~E~g-g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 104 RAHIHRYEQG-GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred chheeehhcc-ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 8875433211 112223666665532 2799999999743 489999999998777 999976 6777
Q ss_pred HHHhCCCEEEEECC--C----CCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccH-
Q 009523 312 LCHKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP- 384 (532)
Q Consensus 312 la~~~gi~lIvDet--~----a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~- 384 (532)
+|+++|+.++.|.+ | +.+++.+-+-.-+|-|...+||.+|.+ +|.+++|+++++++.+..+..+|+.+-.
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 89999999999998 2 234444444445677878899999987 5788999999999998888888776533
Q ss_pred -HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHH
Q 009523 385 -NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 463 (532)
Q Consensus 385 -~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~ 463 (532)
..+.+++-++......+++-.+.+..|+++++..+.+ ++..|..+ .+|+.+.+....-.++.+
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~a~e---------------tNiv~~~l~q~~~~~~~l 323 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVPAVE---------------TNIVNMVLCQARLTAEEL 323 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecchhh---------------cceeeeecccccCCHHHH
Confidence 3455555566554446667778899999999866555 45555433 357777775433445566
Q ss_pred HHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 464 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 464 l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
.+.++..++..-.| ....+|+.+...=+++-++.+..+|
T Consensus 324 ~~~~~k~gi~lm~~---------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 324 CKFLEKNGILLMGG---------------------------ASRRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred HHHHHHCCeEEeec---------------------------cccceEEEEEEecCHHHHHHHHHHH
Confidence 66665444332211 1234888888755555555555554
No 194
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.87 E-value=1.4e-19 Score=190.65 Aligned_cols=257 Identities=14% Similarity=0.092 Sum_probs=184.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
.+..+++++.+++++|.+++++++||++|+.+++.++ +++||+|+++.++|.++... +...|+++++++.
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~----~~~~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANA----FVLRGAKIVFVDIRPDTM 105 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHH----HHHcCCEEEEEecCCCcC
Confidence 4678999999999999999999999999998887766 78999999999999987643 3456888888864
Q ss_pred -CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc--ccccccCCcEEEECCc--c
Q 009523 274 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--K 348 (532)
Q Consensus 274 -~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~--~~~l~~gaDivv~S~s--K 348 (532)
.|++++++++++ ++++|++. |++|...|+++|.++|+++|+++|+|++++.+.. ..+.....|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~-~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K 181 (375)
T PRK11706 106 NIDETLIEAAITP-KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181 (375)
T ss_pred CcCHHHHHHhcCC-CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCc
Confidence 368999999987 79999974 5789999999999999999999999999875532 2233333588888877 9
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHhhh-------------------cC--CCccHHHHHHHHHhHHHHHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNST 407 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~~~-------------------~G--~~~~~~~a~l~l~~l~tl~~r~~~~~~~ 407 (532)
.++.+. .|++++.++++.++++..+.. .| ..++...+...+..++.++...++..++
T Consensus 182 ~l~~g~--gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 182 NYTAGE--GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred cccccC--CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997642 244555567888777654421 12 1234556666777788888888888888
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 476 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~ 476 (532)
++.+.+.|.+.+....+..|..+... .....++++.++.+ .....+++.|...++.++.
T Consensus 260 ~~~~~~~L~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~r~~l~~~L~~~gI~~~~ 318 (375)
T PRK11706 260 WQRYYDALAPLAEAGRIELPSIPDDC---------KHNAHMFYIKLRDL-EDRSALINFLKEAGIMAVF 318 (375)
T ss_pred HHHHHHHhcCCCcCCeeecCCCCCCC---------ceeeEEEEEEECCc-CCHHHHHHHHHHCCCCccc
Confidence 88888888876532222223221100 00133566777532 3455677777666766554
No 195
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.87 E-value=9.6e-20 Score=193.63 Aligned_cols=170 Identities=16% Similarity=0.184 Sum_probs=139.9
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 200 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
....+++++.+++++|.+ ..+++++|++++..++..++++||+|+++++.|.+.. +...+++.|++++.++.
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~ 118 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWG 118 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCC
Confidence 356778889999999873 3577778889999999999999999999998887643 33556778888888754
Q ss_pred --CCHHHHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHH--HHhCCCEEEEECCCCCC-CcccccccCCcEEEEC
Q 009523 274 --ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 345 (532)
Q Consensus 274 --~dle~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~l--a~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S 345 (532)
.|+++|++++++ +++++|++.+++||||.+.|+++|.++ |+++|+++|+|++++.+ .+.+..++|+|+++.|
T Consensus 119 ~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s 198 (401)
T PLN02409 119 QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTG 198 (401)
T ss_pred CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEc
Confidence 368999999975 268999999999999999999999999 99999999999998754 3345556799999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHH
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRN 373 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~ 373 (532)
.+|+++++. ..|+++.++++++++..
T Consensus 199 ~~K~l~~P~--G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 199 SQKALSLPT--GLGIVCASPKALEASKT 224 (401)
T ss_pred CccccCcCC--CcceeEECHHHHHHHhc
Confidence 999997654 27899999888877653
No 196
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.87 E-value=1.1e-19 Score=193.08 Aligned_cols=280 Identities=14% Similarity=0.129 Sum_probs=169.0
Q ss_pred CchhHHHHHHHHHhhh---CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc-------
Q 009523 199 GNPTTVVVEEKMSALE---GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI------- 266 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~---ga-~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv------- 266 (532)
+.+....|++++|+++ +. .+.|++++|+ +++..+ ..++.+||+|++++|+|..... .++..|+
T Consensus 73 p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~~~~ 147 (402)
T TIGR03542 73 PEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVD----SNVMAGRAGVLDDD 147 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHH----HHHHcCCccccccc
Confidence 4456778999999875 33 2445555555 888875 5667899999999999987553 3444566
Q ss_pred ----EEEEeCCCCHHHHHHhh-cCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----cc
Q 009523 267 ----TATVIDPADMEGLEAAL-NNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA 334 (532)
Q Consensus 267 ----~v~~vd~~dle~Le~al-~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----~~ 334 (532)
++..++.+..+.+...+ ...++++|++++|+||||.+++ +++|+++|+++|+++|+||+|...... .+
T Consensus 148 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~ 227 (402)
T TIGR03542 148 GRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHS 227 (402)
T ss_pred cccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcc
Confidence 77666543111111111 1126899999999999999998 678888899999999999997653211 11
Q ss_pred c---cc--CCcEEEECCccccCCCCCcEEEEEEeChHHH--------HHHHHHhhhcCCCccHHHHHHHHHhH-----HH
Q 009523 335 L---SL--GADLVLHSATKFIGGHNDVLAGSISGSGKLV--------TQIRNLHHVLGGALNPNAAYLIIRGM-----KT 396 (532)
Q Consensus 335 l---~~--gaDivv~S~sK~lgg~gd~~gG~lv~~~~li--------~~l~~~~~~~G~~~~~~~a~l~l~~l-----~t 396 (532)
. .. ...+++.|+||.+|.+| ++.||++++++++ +.+...........+.....++...+ +.
T Consensus 228 ~~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 306 (402)
T TIGR03542 228 IFEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQP 306 (402)
T ss_pred hhhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhH
Confidence 1 11 23477899999998666 5689999988876 22211111112223444433333322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeec
Q 009523 397 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPS 475 (532)
Q Consensus 397 l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs 475 (532)
+....+...++.+.+.+.|+++ ++ .+ +++ ..|.++|++++.. .....+.+.+ +..++.+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~L~~~-~~-~~-~~~---------------~~~~f~~v~l~~~-~~~~~l~~~l~~~~gv~v~ 367 (402)
T TIGR03542 307 ILEAISYYMENARILRKALEAA-GF-KV-YGG---------------EHAPYLWVKTPEG-ISSWDFFDFLLYQYHVVGT 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-Cc-ee-cCC---------------CceeEEEEECCCC-CCHHHHHHHHHHhCCEEEe
Confidence 2223344456667777888775 22 12 111 1366899999752 1223444443 23466666
Q ss_pred CCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009523 476 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 525 (532)
Q Consensus 476 ~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL 525 (532)
.|..+.. ...+++||+++. +.+++.+.+
T Consensus 368 pg~~f~~---------------------~~~~~iRis~~~-~~~~l~~~l 395 (402)
T TIGR03542 368 PGSGFGP---------------------SGEGFVRFSAFG-KRENIVEAC 395 (402)
T ss_pred CchhhCC---------------------CCCCEEEEEecC-CHHHHHHHH
Confidence 6644210 024799999865 444433333
No 197
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=1.1e-19 Score=191.20 Aligned_cols=278 Identities=17% Similarity=0.151 Sum_probs=179.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
.++..+++|++||+++|++.+++++||+.|+..++..+.++||.|++....|.++...+.. +. +..+. ++..|+++
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~~~-~~~~d~~~ 129 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWHQS-FRHNDLDH 129 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--CceEE-ecCCCHHH
Confidence 5678999999999999999999999999888776666667889999989899887765532 22 44443 46678999
Q ss_pred HHHhhcC-----CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccc----cccC---CcEEEEC
Q 009523 279 LEAALNN-----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKA----LSLG---ADLVLHS 345 (532)
Q Consensus 279 Le~al~~-----~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~----l~~g---aDivv~S 345 (532)
|++.+++ .++++|++++++|++|.+.|+++|.++|+++|+++++|++++.+. ..+. ..++ .++++.|
T Consensus 130 l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 130 LESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEe
Confidence 9998863 146788899999999999999999999999999999999987542 2221 1223 2367889
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR 423 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 423 (532)
++|.+|+.| +| +++.++..+.+.... ..+....++.....+..+++.+....++..+..+.+.++|.+. +..
T Consensus 210 lsK~~g~~G---~~-vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~--l~~ 283 (370)
T PRK05937 210 YSKALGSMG---AA-LLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQK--FSS 283 (370)
T ss_pred chhhhhcCc---eE-EEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh--cCC
Confidence 999999865 44 445566555544211 1233335555544444555544321122222333344444331 100
Q ss_pred EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcC
Q 009523 424 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 503 (532)
Q Consensus 424 V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~g 503 (532)
..+ +.+..|.+++. ....+.+.|...++.++. .+.|
T Consensus 284 -~~~------------------~~~~~i~~~~~--~~~~~~~~L~~~gi~v~~------~~~~----------------- 319 (370)
T PRK05937 284 -AAP------------------GCVQPIFLPGI--SEQELYSKLVETGIRVGV------VCFP----------------- 319 (370)
T ss_pred -CCC------------------CCEEEEEeCCh--hHHHHHHHHHHCCeeEEe------eCCC-----------------
Confidence 001 12334556542 234555566555655442 1122
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 504 IMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 504 i~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+.||+|++..++++.++.+.++|++
T Consensus 320 -~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 320 -TGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 135799999987777777777766653
No 198
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.87 E-value=1.6e-19 Score=191.03 Aligned_cols=286 Identities=16% Similarity=0.112 Sum_probs=186.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHH-HHHHHHHHhccC--CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMS-ASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~-Ai~~al~all~~--Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~- 274 (532)
+..+++++++++++|.+ +++++++|++ ++..++.+++.+ ||+|+++++.|+.+...+....+..|.+++.++..
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (398)
T cd00613 64 QALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE 143 (398)
T ss_pred HHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC
Confidence 45678899999999975 6667776764 444555555666 99999999999988766654445567888877643
Q ss_pred ----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH-HHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCcc
Q 009523 275 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV-KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 348 (532)
Q Consensus 275 ----dle~Le~al~~~~tklV~lesP~NptG~v~dl-~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK 348 (532)
|++++++++.+ +|++|++++|+ ++|.+.|+ ++|+++|+++|+++|+|+++..+ ...++...++|+++.|+||
T Consensus 144 ~~~~d~~~l~~~i~~-~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K 221 (398)
T cd00613 144 GGTVDLEALKEEVSE-EVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQK 221 (398)
T ss_pred CCCcCHHHHHHhcCC-CeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccc
Confidence 67999999987 69999999985 89999985 99999999999999999986542 3344556789999999999
Q ss_pred ccCCC--CCcEEEEEEeChHHHHHHHHH-------------------------hhhcCC--Cc--cHHH---HHHHHHh-
Q 009523 349 FIGGH--NDVLAGSISGSGKLVTQIRNL-------------------------HHVLGG--AL--NPNA---AYLIIRG- 393 (532)
Q Consensus 349 ~lgg~--gd~~gG~lv~~~~li~~l~~~-------------------------~~~~G~--~~--~~~~---a~l~l~~- 393 (532)
++++. |...+|+++.++++++.+... +...+. .. .+.. ++..+..
T Consensus 222 ~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~ 301 (398)
T cd00613 222 TGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL 301 (398)
T ss_pred cCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh
Confidence 98431 123578999888777654110 000010 01 1111 2211111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCc
Q 009523 394 -MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPY 471 (532)
Q Consensus 394 -l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~ 471 (532)
-+.+....++..++++++.+.|++.+... .+. . ...+.++|.++.. ......+.+.|...+
T Consensus 302 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~---~-----------~~~~~v~~~~~~~~~~~~~~~~~~L~~~g 364 (398)
T cd00613 302 GPEGLKEIAERAHLNANYLAKRLKEVGGVL---PFN---G-----------PFFHEFVLRLPPLYGIRAEDLAKALIDGG 364 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cCC---C-----------CeeEEEEEEcCCcchHHHHHHHHhhhhcC
Confidence 12233344566677778888887765432 111 0 1234567777631 134566776665444
Q ss_pred eeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 472 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 472 i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
+.+.. ..| ...+.||+|+...++++.++.+.++|
T Consensus 365 i~~~~-------~~~-----------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 365 FHAPT-------MYL-----------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccccc-------ccc-----------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 32110 000 02468999999999988888777654
No 199
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=7.4e-20 Score=194.09 Aligned_cols=255 Identities=20% Similarity=0.168 Sum_probs=165.8
Q ss_pred CchhHHHHHH----HHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH-hcccCCcEEEEe-
Q 009523 199 GNPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVI- 271 (532)
Q Consensus 199 ~~p~~~~Le~----~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~-~l~~~Gv~v~~v- 271 (532)
+.+....+++ .+++++|.+.. ++++||++|+..++.+++++||+|+++++.|++....... .++..|.++..+
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 138 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVP 138 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEec
Confidence 3444444444 57788998654 5667899999999999999999999999999875432111 144556554443
Q ss_pred -CCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-----ccccccCC
Q 009523 272 -DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGA 339 (532)
Q Consensus 272 -d~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~ga 339 (532)
+.+ |++++++++.+.++++|++++|+|| ...|+++|+++|+++|+++|+|+++..+.. ..++. ++
T Consensus 139 ~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~ 215 (402)
T cd00378 139 YGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GA 215 (402)
T ss_pred CCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CC
Confidence 222 8999999986447999999888765 567999999999999999999999643221 22334 78
Q ss_pred cEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhc-CCCccHHHHHH----HHHhHH-HHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVL-GGALNPNAAYL----IIRGMK-TLHLRVQQQNSTALRMA 412 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~-G~~~~~~~a~l----~l~~l~-tl~~r~~~~~~~a~~la 412 (532)
|+++.|+||+++|+ .+|++++++ ++++.++...... .+......... +....+ ....++++..++++.+.
T Consensus 216 dv~~~s~sK~l~G~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 292 (402)
T cd00378 216 DVVTTTTHKTLRGP---RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALA 292 (402)
T ss_pred cEEEeccccCCCCC---CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999655 378788776 8888876543211 11111111111 111222 34456677788889999
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 476 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~ 476 (532)
+.|.++ ++..+..|. .+.++|+.++........+.+.|+..++.+..
T Consensus 293 ~~L~~~-g~~~~~~~~----------------~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~ 339 (402)
T cd00378 293 EALKER-GFKVVSGGT----------------DNHLVLVDLRPKGITGKAAEDALEEAGITVNK 339 (402)
T ss_pred HHHHhC-CCeEeecCC----------------CCeEEEEeCCccCCCHHHHHHHHHHcCcEEcC
Confidence 999876 443221121 35688888863111223444445555666554
No 200
>PRK08354 putative aminotransferase; Provisional
Probab=99.87 E-value=9.8e-20 Score=187.01 Aligned_cols=160 Identities=21% Similarity=0.224 Sum_probs=120.1
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHh
Q 009523 203 TVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA 282 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~a 282 (532)
...|+++++++.|. +.++++++++|+..++. ++.+||+|++++|+|.... ..++..|.++..++ .|++.|+++
T Consensus 42 ~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~~~-~d~~~l~~~ 114 (311)
T PRK08354 42 YEWLEEEFSKLFGE-PIVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYE----RVARFFAARIIKGP-NDPEKLEEL 114 (311)
T ss_pred hHHHHHHHHHHHCC-CEEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHH----HHHHHcCCEEeecC-CCHHHHHHh
Confidence 57799999999984 45555555599887775 4458999999999998754 34556788887654 578999888
Q ss_pred hcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCcc-cccccCCcEEEECCccccCCCCCcEE
Q 009523 283 LNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFIGGHNDVLA 358 (532)
Q Consensus 283 l~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~~-~~l~~gaDivv~S~sK~lgg~gd~~g 358 (532)
+++ ++++++++|+||||.+.+. ++|+++|+++|+++|+||+|...... ........+++.|+||.++-+| .+.
T Consensus 115 ~~~--~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~G-lRi 191 (311)
T PRK08354 115 VER--NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPG-IRV 191 (311)
T ss_pred hcC--CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCcc-cee
Confidence 763 6789999999999999985 56677788899999999998664321 1122334689999999998665 467
Q ss_pred EEEEeChHHHHHHHHHh
Q 009523 359 GSISGSGKLVTQIRNLH 375 (532)
Q Consensus 359 G~lv~~~~li~~l~~~~ 375 (532)
|++++ +.+.++...
T Consensus 192 G~~v~---~~~~l~~~~ 205 (311)
T PRK08354 192 GYVKG---FEEAFRSVR 205 (311)
T ss_pred eeeee---hHHHHHHcC
Confidence 88887 455555544
No 201
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=4e-20 Score=194.03 Aligned_cols=304 Identities=19% Similarity=0.219 Sum_probs=207.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---- 274 (532)
.+.+++||+++++++|.+.++.++||+.|+.+++.++ +++||+|+++..+|.++... +...|.+++++|.+
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~a----i~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASA----ILWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHH----HHHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHH----HHHhccEEEEEeccCCcC
Confidence 5889999999999999999999999999999999998 68999999999999987643 44569999999854
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccc--cccCCcEEEECC--cc
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--LSLGADLVLHSA--TK 348 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~--l~~gaDivv~S~--sK 348 (532)
|++++++++++ +|++|++ .+..|...|+++|.++|+++|++||.|.+++.+...+. ...-.|+.++|| +|
T Consensus 100 ~id~~~~~~~i~~-~t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K 175 (363)
T PF01041_consen 100 NIDPEALEKAITP-KTKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTK 175 (363)
T ss_dssp SB-HHHHHHHHHT-TEEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTS
T ss_pred CcCHHHHHHHhcc-CccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCC
Confidence 89999999998 7999998 45569999999999999999999999999876543332 222349999998 59
Q ss_pred ccCCCCCcEEEEEEeCh-HHHHHHHHHhhh-----------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 410 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~-~li~~l~~~~~~-----------------~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~ 410 (532)
.+..+. ||+++.++ ++.++++.++.. +...++.+.+.+++..|+.++.++++..++++.
T Consensus 176 ~i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~ 252 (363)
T PF01041_consen 176 IITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQR 252 (363)
T ss_dssp SS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 986554 78888864 666777654321 123477888999999999999999999999999
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
+.+.|.+.+.+.....+.-... .....+.+.+++.. .....+++.|+..++.+.......+..+|...
T Consensus 253 y~~~L~~~~~~~~~~~~~~~~~-----------~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~ 321 (363)
T PF01041_consen 253 YREALAGIPGIKPPPIPDGAER-----------SSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYR 321 (363)
T ss_dssp HHHHHTTGTTEEEEGCGTTTEE-----------BCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGT
T ss_pred HHHHHhcCCCcccccccccccc-----------cccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHH
Confidence 9999999888765544432110 01224556666421 13556777777667777654322333333321
Q ss_pred ccc-----CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 490 SYW-----DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 490 s~~-----~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
.+. .+|..+. +.+..|-|-+...-.++.++.+.+++
T Consensus 322 ~~~~~~~~~~P~ae~----l~~r~l~LP~~~~lt~edv~~I~~~i 362 (363)
T PF01041_consen 322 SYPYYAPGDLPNAER----LSQRLLSLPIHPRLTEEDVDYIAEAI 362 (363)
T ss_dssp TGEEEETSSSHHHHH----HHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred hcCccccCCCHHHHH----HHhCeEECcCCCCCCHHHHHHHhhcc
Confidence 111 1222221 23456777776655566666666665
No 202
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=1.2e-19 Score=192.36 Aligned_cols=289 Identities=14% Similarity=0.154 Sum_probs=192.0
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHh--------
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETV-------- 260 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~-------- 260 (532)
+...+|.++...+|+++|+++.+. +++++++||++|+..+++.+..+| ++|+..++.|++........
T Consensus 77 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 156 (398)
T PRK03244 77 HVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRA 156 (398)
T ss_pred CccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCccccc
Confidence 334567888889999999999875 367888999999999998776676 46777777888753221111
Q ss_pred -cccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC------
Q 009523 261 -LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------ 329 (532)
Q Consensus 261 -l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~------ 329 (532)
+...+..+..++..|++++++++++ ++++|++|+++||+|.+.| +++|.++|++||+++|+||++...
T Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~ 235 (398)
T PRK03244 157 PFEPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAW 235 (398)
T ss_pred CCCCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchH
Confidence 1112334556666789999999876 7999999999999999987 889999999999999999997531
Q ss_pred CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHH
Q 009523 330 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 407 (532)
Q Consensus 330 ~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~ 407 (532)
+.........|++ +++|.++++ ...|++++++++++.+...........++..+..+...++.+. ...++..+.
T Consensus 236 ~~~~~~~~~pDi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~ 311 (398)
T PRK03244 236 FAHQHDGVTPDVV--TLAKGLGGG--LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERL 311 (398)
T ss_pred HhhhhhCCCCCEE--EEchhhhCC--cccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 1112223346776 578999953 4578888888887776542222222346666666666665432 233444455
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
.+++.+.|++.. +|.. ...++.|.+++++++. .....+.+.+...++-++..
T Consensus 312 ~~~l~~~L~~~~------~~~~----------~~v~g~g~~~~i~~~~--~~~~~~~~~l~~~Gv~~~~~---------- 363 (398)
T PRK03244 312 GEQLRAGIEALG------HPLV----------DHVRGRGLLLGIVLTA--PVAKAVEAAAREAGFLVNAV---------- 363 (398)
T ss_pred HHHHHHHHHhcC------CCce----------eeEeeccEEEEEEEec--cHHHHHHHHHHHCCeEEeec----------
Confidence 666677776521 1211 0113468899999964 24556666665555443221
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
..+.|||++.. ++.+.+++.|++++..
T Consensus 364 -----------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 364 -----------------APDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred -----------------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 13679999776 4556666666666653
No 203
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=2.4e-19 Score=191.19 Aligned_cols=280 Identities=15% Similarity=0.142 Sum_probs=199.0
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------------cCCCEEEEcCCCCcchHHHHHHhcccC-C
Q 009523 201 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------------PAGGHIVTTTDCYRKTRIFIETVLPKM-G 265 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all--------------~~Gd~VIv~~~~y~~t~~~~~~~l~~~-G 265 (532)
+..++||++||+++|.+++++++||..|+..++.++. ..+|.|++....|.+....++ +.+.. +
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~ 225 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGN 225 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCC
Confidence 4577899999999999999999999999999888772 456788888888988765553 22222 5
Q ss_pred cEEEEeCCCCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc-------c--
Q 009523 266 ITATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------A-- 334 (532)
Q Consensus 266 v~v~~vd~~dle~Le~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~-------~-- 334 (532)
.++..++.+|+++|++.++.. +.++|++|...++.|.+.|+++|.++|++||+++|+||+++.+..-. .
T Consensus 226 a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g 305 (476)
T PLN02955 226 VEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFN 305 (476)
T ss_pred ceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhC
Confidence 788888999999999988532 46799999999999999999999999999999999999977543211 1
Q ss_pred cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHH
Q 009523 335 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTAL 409 (532)
Q Consensus 335 l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~ 409 (532)
+....|+++.|++|.+|.. ||++++++++++.++.... .+++.++|..+..++.+++.+ ..+.++..+|.+
T Consensus 306 ~~~di~ii~~TLsKA~G~~----GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~ 381 (476)
T PLN02955 306 CEADVDLCVGTLSKAAGCH----GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVK 381 (476)
T ss_pred CCCCCcEEEEeCccchhcc----CceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1124689999999999855 6899999988888875433 345555555555555555443 234445555555
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
++.+.+ +++. ...++.+.+. +...+..+.+.|...|+.++. +..|+.
T Consensus 382 ~fr~~~------------G~~~-------------~sPI~pI~ig-~~~~a~~~~~~L~~~Gi~v~~------i~yPtV- 428 (476)
T PLN02955 382 EFKALS------------GVDI-------------SSPIISLVVG-NQEKALKASRYLLKSGFHVMA------IRPPTV- 428 (476)
T ss_pred HHHHhc------------CCCC-------------CCCEEEEEeC-CHHHHHHHHHHHHHCCCEEEE------ECCCCC-
Confidence 544421 1110 1357888774 456666777777666665543 233432
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
| .....+||++...++++.|+.+.++|..
T Consensus 429 -----P--------~g~~rLRi~lsA~Ht~edId~lv~~L~~ 457 (476)
T PLN02955 429 -----P--------PNSCRLRVTLSAAHTTEDVKKLITALSS 457 (476)
T ss_pred -----C--------CCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence 1 1235799999988877777777777653
No 204
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.86 E-value=1.9e-19 Score=188.49 Aligned_cols=274 Identities=14% Similarity=0.067 Sum_probs=181.4
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhcc----CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 203 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~----~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
.+++++++++++|.+ ..+++++|++++..++.++.. +||+|+++++.|.+.. ..++..|++++.++.
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~~ 136 (371)
T PRK13520 61 EEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDDD 136 (371)
T ss_pred HHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCCC
Confidence 468999999999974 467888888999888876643 5799999999987633 344566888888764
Q ss_pred --CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc--------ccccccCCcEEE
Q 009523 274 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--------QKALSLGADLVL 343 (532)
Q Consensus 274 --~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~--------~~~l~~gaDivv 343 (532)
.|+++|++++++ ++++|++..++|++|.+.|+++|.++|+++|+++++|++|+.+.. .+....++|.+.
T Consensus 137 ~~~d~~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~ 215 (371)
T PRK13520 137 YRVDVKAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSIT 215 (371)
T ss_pred CcCCHHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEE
Confidence 389999999987 577777778899999999999999999999999999999864321 111134789999
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhh--------cCCCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHH
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALR 410 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------~G~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~ 410 (532)
.|.+|+..++. ..|++++.++++++.+...... .+++.++..+..+...++ .+..+.++..+++++
T Consensus 216 ~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~ 294 (371)
T PRK13520 216 IDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRW 294 (371)
T ss_pred ECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHH
Confidence 99999865432 2345555666677665421111 011122222222223332 233456677788888
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.|++. ++..+..| ..+++.|.++. ...+.+.|...++.++.+.
T Consensus 295 l~~~L~~~-g~~~~~~~-----------------~~~~v~~~~~~----~~~v~~~L~~~gi~v~~~~------------ 340 (371)
T PRK13520 295 LAEELKER-GFEPVIEP-----------------VLNIVAFDDPN----PDEVREKLRERGWRVSVTR------------ 340 (371)
T ss_pred HHHHHHhC-CCEEecCC-----------------CceEEEEecCC----HHHHHHHHHHCCceeccCC------------
Confidence 88888875 44322211 23578888763 2344444443355444321
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.++.||+|++..++++.++.+.++|+
T Consensus 341 --------------~~~~iRis~~~~~t~edi~~~~~~l~ 366 (371)
T PRK13520 341 --------------CPEALRIVCMPHVTREHIENFLEDLK 366 (371)
T ss_pred --------------CCCEEEEEEECCCCHHHHHHHHHHHH
Confidence 13579999987666666666666554
No 205
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=1.1e-19 Score=188.19 Aligned_cols=211 Identities=20% Similarity=0.244 Sum_probs=171.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---- 274 (532)
.|.+.++|+++|++.|...++.++||+.|+.++++++ +.|||+||++..+|.+|.+.+ -..|.+++++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i----~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAV----LLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHH----HHcCCeEEEEecCCccc
Confidence 5788999999999999999999999999999999966 699999999999999887543 3458889998865
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--CcEEEECC--cc
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 348 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aDivv~S~--sK 348 (532)
|++.||++|++ +||+|+. -+-.|...|+++|.++|++||++||+|.+++.+...+....| .|+.++|| +|
T Consensus 109 nid~~~ie~aIt~-~tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K 184 (374)
T COG0399 109 NIDPDLIEAAITP-RTKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATK 184 (374)
T ss_pred CCCHHHHHHHccc-CCeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCC
Confidence 89999999998 6999986 445699999999999999999999999997766443333333 48888887 68
Q ss_pred ccCCCCCcEEEEEEeCh-HHHHHHHHHhhh--------------c--CCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGSG-KLVTQIRNLHHV--------------L--GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 411 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~-~li~~l~~~~~~--------------~--G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~l 411 (532)
.+...- ||+++.++ ++.++++.++.. . ...++...+++.+..|+.++..+++..++++..
T Consensus 185 ~ittgE---GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y 261 (374)
T COG0399 185 NLTTGE---GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIY 261 (374)
T ss_pred CccccC---ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887553 78888865 666766643321 1 123556677788889999999999999999999
Q ss_pred HHHHHhCCCc
Q 009523 412 AKILEAHPKV 421 (532)
Q Consensus 412 a~~L~~~p~v 421 (532)
.+.|++.+.+
T Consensus 262 ~~~l~~~~~~ 271 (374)
T COG0399 262 AEALKGLPGI 271 (374)
T ss_pred HHHhhcCCCc
Confidence 9999987653
No 206
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.86 E-value=3.3e-19 Score=186.94 Aligned_cols=277 Identities=14% Similarity=0.066 Sum_probs=186.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc------cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all------~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
...+++++.||+++|.+ ..+++++|++++..++.++. ++||+|+++++.|.+.. ..++..|++++.++
T Consensus 59 ~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v~ 134 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYAP 134 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEEe
Confidence 45588999999999984 45788888888887776553 46799999999997633 34566788888876
Q ss_pred C-----CCHHHHHHhhcCCCee-EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-----------cccc
Q 009523 273 P-----ADMEGLEAALNNNNVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----------QKAL 335 (532)
Q Consensus 273 ~-----~dle~Le~al~~~~tk-lV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-----------~~~l 335 (532)
. .|++++++++++ ++. ++++ +|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+..
T Consensus 135 ~~~~~~~d~~~l~~~l~~-~~~~vv~~-~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~ 212 (373)
T TIGR03812 135 LDEDYTVDVKDVEDLIDD-NTIGIVGI-AGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFS 212 (373)
T ss_pred eCCCCCcCHHHHHHHHhh-CcEEEEEE-CCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcccc
Confidence 4 379999999977 454 4555 5899999999999999999999999999999864321 1111
Q ss_pred ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhc-C-------CCccHHHHHHHHHhHHH-----HHHHHH
Q 009523 336 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-G-------GALNPNAAYLIIRGMKT-----LHLRVQ 402 (532)
Q Consensus 336 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~-G-------~~~~~~~a~l~l~~l~t-----l~~r~~ 402 (532)
..|+|.+..|.||+..++. ..||+++.++++++.++...... + ++.+......+...++. +..+.+
T Consensus 213 ~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~ 291 (373)
T TIGR03812 213 LPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVA 291 (373)
T ss_pred CCCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHH
Confidence 2378999999999654332 13567777888877664211111 1 11222222222333332 344566
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
+..++++++.+.|++.+. ..+ ++. ..+++.|.+++. ..+.+.|...++.++.+.
T Consensus 292 ~~~~~~~~l~~~L~~~g~-~~~-~~~----------------~~~~v~~~~~~~----~~v~~~L~~~gi~v~~~~---- 345 (373)
T TIGR03812 292 ECMENTRYLVEELKKIGF-EPV-IEP----------------VLNIVAFEVDDP----EEVRKKLRDRGWYVSVTR---- 345 (373)
T ss_pred HHHHHHHHHHHHHHhCCC-eEE-cCC----------------CceEEEEEeCCH----HHHHHHHHHCCceeccCC----
Confidence 777888888888887642 222 121 245788887642 244555544454443210
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
.++.||+|++..++++.++.+.++|++|
T Consensus 346 ----------------------~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 ----------------------CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred ----------------------CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 1468999999888888888888888764
No 207
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=3.2e-19 Score=189.87 Aligned_cols=281 Identities=14% Similarity=0.122 Sum_probs=178.2
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCC---EEEEcCCCCcchHHHHHHhcccCCcEE----EEeCC
Q 009523 203 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITA----TVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd---~VIv~~~~y~~t~~~~~~~l~~~Gv~v----~~vd~ 273 (532)
.+.+++ + +++|++ +.++++|++++++.++.+++++|+ .|+++..+|++....+...+++.|+++ ..++.
T Consensus 73 ~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (406)
T TIGR01814 73 DESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP 150 (406)
T ss_pred hhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc
Confidence 344444 5 788873 566777777999999998876653 688888999987665544556678776 34432
Q ss_pred -----CCHHHHHHhhc--CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEEC
Q 009523 274 -----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 345 (532)
Q Consensus 274 -----~dle~Le~al~--~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S 345 (532)
.|++++++.++ ..+|++|++++++|.+|.++|+++|.++||++|+++++|++++.+. +++..++|+|+++.|
T Consensus 151 ~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s 230 (406)
T TIGR01814 151 REEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWC 230 (406)
T ss_pred CCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEc
Confidence 26788888774 1269999999999999999999999999999999999999987663 455557799999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHH-hh----------------------hcCCCccHHHHHHHHHhHHHH-----
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-HH----------------------VLGGALNPNAAYLIIRGMKTL----- 397 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~-~~----------------------~~G~~~~~~~a~l~l~~l~tl----- 397 (532)
.||+++++.+ +|+++.++. ...+... .. ...++.+....+.+..+++.+
T Consensus 231 ~hK~l~g~pG--~~l~v~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~ 307 (406)
T TIGR01814 231 TYKYLNAGPG--AGAFVHEKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGM 307 (406)
T ss_pred CccccCCCCC--eEEEEehhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCH
Confidence 9999864421 454444433 2222110 00 001233333444344455443
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC----CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009523 398 HLRVQQQNSTALRMAKILEAHP----KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 473 (532)
Q Consensus 398 ~~r~~~~~~~a~~la~~L~~~p----~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~ 473 (532)
....++..+..+++.+.|++.+ ++. +..|. .+ ...+++++|.++.+ ...+.+.|...++.
T Consensus 308 ~~i~~~~~~l~~~l~~~l~~~~~~~~~~~-i~~~~---~~---------~~r~~~v~~~~~~~---~~~~~~~L~~~gi~ 371 (406)
T TIGR01814 308 EALRKKSLLLTDYLEELIKARCGGPPVLT-IITPR---DH---------AQRGCQLSLTHPVP---GKAVFQALIKRGVI 371 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceE-EeCCC---Ch---------hhcCCeEEEEecCC---HHHHHHHHHHCCEE
Confidence 2223344455556666665532 232 22221 11 11367889988722 23444455444544
Q ss_pred ecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCCCHHHHHHHHHHHHhh
Q 009523 474 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVEDFEDLKADVLQALHA 531 (532)
Q Consensus 474 vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv-G~ed~~dli~dL~~AL~~ 531 (532)
+... .++.||+|+ +..++++.|+.+.++|++
T Consensus 372 v~~~---------------------------~~~~iRiS~~~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 372 GDKR---------------------------EPSVIRVAPVPLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred Eecc---------------------------CCCeEEEechhccCCHHHHHHHHHHHHH
Confidence 3210 136899999 578777777888777764
No 208
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=2.4e-19 Score=191.32 Aligned_cols=254 Identities=19% Similarity=0.158 Sum_probs=167.8
Q ss_pred chhHHHHHH----HHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH-hcccCCcEEEEeCC
Q 009523 200 NPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP 273 (532)
Q Consensus 200 ~p~~~~Le~----~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~-~l~~~Gv~v~~vd~ 273 (532)
.+..+.+++ .+++++|.+.. ++++||++|+..++.+++++||+|+++.++|.+....... .+...|.++..++.
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV 145 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc
Confidence 445555655 88999998655 6678999999999999999999999999999764321111 12334566666543
Q ss_pred ------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-----ccccccCCcEE
Q 009523 274 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLV 342 (532)
Q Consensus 274 ------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~gaDiv 342 (532)
.|+++++++++++++++|+++.++ +|...|+++|.++|+++|+++|+|++++.+.. ..+.. ++|++
T Consensus 146 ~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 146 DEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred CcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 378999999975468999986544 45678999999999999999999999654321 12334 78999
Q ss_pred EECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhc--CCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~--G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a~~la~~L 415 (532)
+.|+||+++|+ .||+++++ ++++++++...... +....+..+.+.....+ .+..++++..++++++.+.|
T Consensus 223 ~~S~~K~l~g~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 223 TTTTHKTLRGP---RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred EecCCcCCCCC---CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999655 37888885 68888877654321 11111122211111111 24566778889999999999
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 476 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~ 476 (532)
++. ++. +. +. . ..++++++.+++.......+.+.|+..++.++.
T Consensus 300 ~~~-g~~-~~-~~---~-----------~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~ 343 (416)
T PRK00011 300 AER-GFR-VV-SG---G-----------TDNHLVLVDLRSKGLTGKEAEAALEEANITVNK 343 (416)
T ss_pred HhC-CCe-ee-ec---C-----------CCCeEEEEeCcccCCCHHHHHHHHHHcCcEEcc
Confidence 875 342 21 11 0 023578888753211234455556555666654
No 209
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.85 E-value=3.9e-19 Score=179.36 Aligned_cols=263 Identities=20% Similarity=0.218 Sum_probs=189.6
Q ss_pred ccccccccCChHHHHHHhhcc-cCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcC
Q 009523 169 VNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTT 247 (532)
Q Consensus 169 ~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~ 247 (532)
++|.++.=+..+.+++....+ .+.-.|| .+|..+++++++++++|.+.++|++||++|+.++|.+.++||+.||+..
T Consensus 4 f~SDn~~g~~~~m~eam~~a~~~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 4 FRSDNVAGPTPEMREALAAANAVGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred cccCccCCCCHHHHHHHHhccccCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 456677767777776666544 3333454 5799999999999999998899999999999999999999999999999
Q ss_pred CCCcchHHHHHHhcccC--CcEEEEeCC----CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCH---HHHHHHH
Q 009523 248 DCYRKTRIFIETVLPKM--GITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDV---KLVSDLC 313 (532)
Q Consensus 248 ~~y~~t~~~~~~~l~~~--Gv~v~~vd~----~dle~Le~al~~~-----~tklV~lesP~NptG~v~dl---~~I~~la 313 (532)
..|-.+.+.- ..+-+ +.++..++. .++++|++.+++. .+.++++++..|..|+++++ ++|.++|
T Consensus 82 ~aHi~~~E~G--a~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 82 TAHIYTDECG--APEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159 (342)
T ss_pred cccceecccC--cHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence 8886543211 11112 234433442 2799999988642 36777777887788999985 5677789
Q ss_pred HhCCCEEEEECC--C----CCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHH--
Q 009523 314 HKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN-- 385 (532)
Q Consensus 314 ~~~gi~lIvDet--~----a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~-- 385 (532)
|++|++|++|.+ + +.......+..++|++..++||.++.+. +.+++++.+++++++.++...|+.+...
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~ 236 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARF 236 (342)
T ss_pred HHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhH
Confidence 999999999999 1 1122334455689999999999998763 6677889999999998888888765432
Q ss_pred HHHHHHHhHHHHHHHHHHHHHH--HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 386 AAYLIIRGMKTLHLRVQQQNST--ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 386 ~a~l~l~~l~tl~~r~~~~~~~--a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
.+...+..++.-..++....+| +++|++.|++.|+++ +..|. -.+++-+.++.
T Consensus 237 laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~----------------~tN~vf~~l~~ 291 (342)
T COG2008 237 LAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVK-LAFPV----------------ETNMVFVRLPE 291 (342)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCC----------------cccEEEEECCh
Confidence 2333344455544455555566 899999999888774 33331 24688888874
No 210
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.85 E-value=6.1e-19 Score=187.17 Aligned_cols=253 Identities=17% Similarity=0.183 Sum_probs=169.2
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCCcchHHHHHHhcc-----
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETVLP----- 262 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~---------~G-d~VIv~~~~y~~t~~~~~~~l~----- 262 (532)
..++...+|+++|+++.+.+.+++++||++|+..+++.... +| ++||+.+..|++.......+..
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~ 158 (396)
T PRK04073 79 FHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYK 158 (396)
T ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccc
Confidence 45677889999999999888899999999999999886531 34 6788888888774321111110
Q ss_pred -cCC---cEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 263 -KMG---ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 263 -~~G---v~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
.++ ..+..++..|++++++++++ ++++|++|+|+||+|.+.| +++|.++|+++|+++|+||++.....
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 237 (396)
T PRK04073 159 RGFGPMLPGIKKIPYGDLEALKAAITP-NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK 237 (396)
T ss_pred cCCCCCCCCceEeCCCCHHHHHHhccc-CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH
Confidence 011 12345677789999999976 6999999999999999987 78999999999999999999764211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHH
Q 009523 332 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 406 (532)
Q Consensus 332 ---~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~ 406 (532)
........|+++ ++|.+|+++ ...|++++++++++.+...........++..++.++..++.+. ...++..+
T Consensus 238 ~~~~~~~~~~pdi~~--~sK~lg~gg-~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~ 314 (396)
T PRK04073 238 LFACDWDNVTPDMYI--LGKALGGGV-FPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLE 314 (396)
T ss_pred HHHhhhcCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 122233467776 789998764 3468888999888877542221122246666666666666442 12234445
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 473 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~ 473 (532)
..+++.+.|++.. ++.+. ..++.|.++.++++. ....|.+.|...++.
T Consensus 315 ~~~~l~~~L~~l~------~~~i~----------~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~ 362 (396)
T PRK04073 315 LGEYFKEQLKEID------NPMIK----------EVRGRGLFIGVELNE---PARPYCEALKEEGLL 362 (396)
T ss_pred HHHHHHHHHHhhc------CCccc----------ceecceEEEEEEecc---hHHHHHHHHHHCCeE
Confidence 5666666666531 12111 113457889998863 234566666544543
No 211
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.85 E-value=1.2e-19 Score=185.30 Aligned_cols=221 Identities=19% Similarity=0.237 Sum_probs=158.5
Q ss_pred CCCCCC-CCch-hHHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC
Q 009523 192 SFEYGR-YGNP-TTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 192 ~~~Y~R-~~~p-~~~~Le~~lA~l~ga----~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
-+.|+| ||.| .+..|++++++++|. ++.|++|.|. +++..++++++.+||+||+.+|.|...... ....
T Consensus 62 ~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~----~~ma 137 (420)
T KOG0257|consen 62 TNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQ----VVMA 137 (420)
T ss_pred hccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhH----Hhhc
Confidence 456776 5554 567788999998774 3445555555 999999999999999999999999875533 3344
Q ss_pred CcEEEEeCC-------------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCC
Q 009523 265 GITATVIDP-------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 265 Gv~v~~vd~-------------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~ 328 (532)
|...++++. .|.++++.++++ +||+|++++||||||.+.+ +++|+++|++||+++|.||+|.-
T Consensus 138 G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~ 216 (420)
T KOG0257|consen 138 GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEW 216 (420)
T ss_pred CCcceeeccccccccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHH
Confidence 555555542 289999999998 8999999999999999997 77899999999999999999643
Q ss_pred CCc-------c--cccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCC-CccHHHHH--HHHH-hH-
Q 009523 329 PLN-------Q--KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG-ALNPNAAY--LIIR-GM- 394 (532)
Q Consensus 329 ~~~-------~--~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~-~~~~~~a~--l~l~-~l- 394 (532)
.+. + .|-.....+-+.|++|++|-.|. ..||+++++.++..++..+....- +..+...+ .+.. ++
T Consensus 217 ~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGW-rlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~ 295 (420)
T KOG0257|consen 217 LVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGW-RLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELA 295 (420)
T ss_pred HhhCCCcceeeecCCchhheEEEeccccceeeeeee-eeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhh
Confidence 211 1 12222346889999999997764 578999988888877766554332 22232111 1111 11
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 395 -------KTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 395 -------~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.......+...+++..|++.|++.
T Consensus 296 ~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 296 CLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223335566678889999999886
No 212
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.85 E-value=1.8e-19 Score=186.85 Aligned_cols=267 Identities=15% Similarity=0.108 Sum_probs=177.7
Q ss_pred chhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc------------CC--CEEEEcCCCCcchHHHHHHhc
Q 009523 200 NPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP------------AG--GHIVTTTDCYRKTRIFIETVL 261 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~----~~i~~sSG~~Ai~~al~all~------------~G--d~VIv~~~~y~~t~~~~~~~l 261 (532)
....+++.+.+++++|.+ +.+++++|++|+..++.++.. +| +.|+++++.|.+.....
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~---- 112 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA---- 112 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH----
Confidence 334444556667777864 688889999999999887742 33 37888888888754332
Q ss_pred ccCCcEEEEeCC-----CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc
Q 009523 262 PKMGITATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN 331 (532)
Q Consensus 262 ~~~Gv~v~~vd~-----~dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~ 331 (532)
...|.+++.++. .|+++|++++++. ++++|+++.|+||+|.+.|+++|+++|+++|+++++|++++.+..
T Consensus 113 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~ 192 (345)
T cd06450 113 AYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLL 192 (345)
T ss_pred HHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHh
Confidence 334677776653 3799999998651 478999999999999999999999999999999999999875432
Q ss_pred -ccccc------cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH--HHHHHHHH
Q 009523 332 -QKALS------LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--KTLHLRVQ 402 (532)
Q Consensus 332 -~~~l~------~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l--~tl~~r~~ 402 (532)
..... .++|.+..|+||+++++. ..|+++.+ ....+.+++.+ ..+..+++
T Consensus 193 ~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~-------------------~~~~~~~l~~l~~~g~~~~~~ 251 (345)
T cd06450 193 PFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR-------------------ALKLWATLRRFGRDGYGEHID 251 (345)
T ss_pred hChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH-------------------HHHHHHHHHHHhHHHHHHHHH
Confidence 11111 268999999999887653 24555433 22223333222 33456667
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCceeecCCCc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~---~~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
+..+.++++.+.|++.+++..+..| .++++.|.+++. ......+.+.|...++.+..+
T Consensus 252 ~~~~~~~~l~~~L~~~~~~~~~~~~-----------------~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~-- 312 (345)
T cd06450 252 RIVDLAKYLAELIRADPGFELLGEP-----------------NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPA-- 312 (345)
T ss_pred HHHHHHHHHHHHHhcCCCeEEecCC-----------------ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEe--
Confidence 7778888999999888776332111 246888888752 133455666665443211111
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhh
Q 009523 480 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALHA 531 (532)
Q Consensus 480 ~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~AL~~ 531 (532)
.. .+ .++.+|+|++.. +.++.++.+.++|++
T Consensus 313 -------~~-------------~~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 313 -------TT-------------LG-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -------eE-------------EC-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 00 00 246899999976 367777778777765
No 213
>PLN02231 alanine transaminase
Probab=99.85 E-value=1.3e-18 Score=190.61 Aligned_cols=216 Identities=15% Similarity=0.170 Sum_probs=143.6
Q ss_pred hhHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 201 PTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 201 p~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~-~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.....|++.||+++ |. ++.++++++++|+..++..++. +||.|+++.|.|..... .+...|.++..+
T Consensus 168 ~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~----~~~~~g~~~v~~ 243 (534)
T PLN02231 168 QGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSA----SIALHGGTLVPY 243 (534)
T ss_pred CCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHH----HHHHcCCEEEEE
Confidence 34567788888765 32 3455555556999999999984 89999999999987543 344556666665
Q ss_pred CC-------CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc--c-
Q 009523 272 DP-------ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--K- 333 (532)
Q Consensus 272 d~-------~dle~Le~al~~~-----~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~--~- 333 (532)
+. .|+++|++++++. ++|+|++++|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 244 ~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~ 323 (534)
T PLN02231 244 YLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKK 323 (534)
T ss_pred ecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 32 2789999888541 5899999999999999997 567888899999999999997653221 0
Q ss_pred --cc-c----cC------CcEEEECCccccCC-CCCcEEEEEEe---ChHHHHHHHHHhhhcCCCccHHHHHHHHHhH--
Q 009523 334 --AL-S----LG------ADLVLHSATKFIGG-HNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-- 394 (532)
Q Consensus 334 --~l-~----~g------aDivv~S~sK~lgg-~gd~~gG~lv~---~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l-- 394 (532)
.+ . .| .-++++|+||.+.| .| .++||++. ++++++.+.+.... ..+.+.....++...+
T Consensus 324 ~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~ 401 (534)
T PLN02231 324 FHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFTSDVREQIYKVASV-NLCSNISGQILASLVMSP 401 (534)
T ss_pred cccHHHHHhhhccccCCceEEEEeccCcccccCCc-cceEEEEEecCCHHHHHHHHHHHhh-hcCCChHHHHHHHHHhCC
Confidence 11 0 11 23778999997643 43 56898875 67888888765442 2222222222222222
Q ss_pred --------HH----HHHHHHHHHHHHHHHHHHHHhCCCce
Q 009523 395 --------KT----LHLRVQQQNSTALRMAKILEAHPKVK 422 (532)
Q Consensus 395 --------~t----l~~r~~~~~~~a~~la~~L~~~p~v~ 422 (532)
+. .....+...++++.+.+.|++++++.
T Consensus 402 p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 402 PKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 11 11113445577778888888776653
No 214
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.84 E-value=6.9e-19 Score=201.81 Aligned_cols=325 Identities=15% Similarity=0.081 Sum_probs=205.2
Q ss_pred cccCCCCCCCCCchhHHHHHHHHHhhhCCC--c-E-EEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcc
Q 009523 188 KRRASFEYGRYGNPTTVVVEEKMSALEGAE--S-T-VIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLP 262 (532)
Q Consensus 188 ~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~--~-~-i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~ 262 (532)
+.++.|..++......++.|+++|+++|++ + . ++++++++|+++++.++ +++||+||++...|.+...++ ..++
T Consensus 65 np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~ 143 (805)
T PLN02724 65 NPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYAL 143 (805)
T ss_pred CCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHH
Confidence 444445556666778899999999999972 3 3 44455669999998887 789999999999998876543 5566
Q ss_pred cCCcEEEEeCCC-------------C--HHHHHHhhc---------CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--
Q 009523 263 KMGITATVIDPA-------------D--MEGLEAALN---------NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-- 316 (532)
Q Consensus 263 ~~Gv~v~~vd~~-------------d--le~Le~al~---------~~~tklV~lesP~NptG~v~dl~~I~~la~~~-- 316 (532)
+.|+++.+++.+ + .++|++.++ ..++++|.+.+.+|.+|.++|++.|.++++..
T Consensus 144 ~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~ 223 (805)
T PLN02724 144 EKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHS 223 (805)
T ss_pred HcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhccc
Confidence 779999887643 1 144655431 12578999999999999999999775555432
Q ss_pred ------CCEEEEECCCCCC-CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-------------
Q 009523 317 ------GAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH------------- 376 (532)
Q Consensus 317 ------gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~------------- 376 (532)
++++++|.+++.+ .+.+..++++|+++.|+||++|++.+ .|+++.++++.+.+.....
T Consensus 224 ~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~ 301 (805)
T PLN02724 224 NFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADID 301 (805)
T ss_pred ccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccc
Confidence 3689999997665 44566678999999999999994432 6888888777766543211
Q ss_pred -----------hcCCCccHHHHHHHHHhHHHHHH-----HHHHHHHHHHHHHHHHHhCC------CceEEeCCCCCCCch
Q 009523 377 -----------VLGGALNPNAAYLIIRGMKTLHL-----RVQQQNSTALRMAKILEAHP------KVKRVHYPGLKSHPE 434 (532)
Q Consensus 377 -----------~~G~~~~~~~a~l~l~~l~tl~~-----r~~~~~~~a~~la~~L~~~p------~v~~V~~Pgl~s~p~ 434 (532)
.-.++.+......+..+++.+.. ..++..+.++++.+.|.+.+ .| .++-|.-.. +.
T Consensus 302 ~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v-~iyg~~~~~-~~ 379 (805)
T PLN02724 302 FVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVC-VLYGNHTFK-LE 379 (805)
T ss_pred eeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEE-EEcCCCCCC-CC
Confidence 01122333333333344544332 12233355666667777654 23 333231000 00
Q ss_pred hhhHhhhcCCcccEEEEEEcCC------HHHHHHHHHHcCCCceeecCCCcccccccCccc-cccCCCHHHHH-------
Q 009523 435 HHIATQQMTGFGGVVSFEVDGD------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM-SYWDLSQSERL------- 500 (532)
Q Consensus 435 ~~l~~~~~~g~G~~vsf~l~g~------~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~-s~~~~~~~~~~------- 500 (532)
....+++++|.+.+. ...+..+. ...+|.+..|..+. |... .+-.+..++..
T Consensus 380 -------~~~r~~ivsFnv~~~~~~~v~~~~v~~l~---~~~gI~vR~G~~Ca----~~~~~~~lg~~~~~l~~~~~~~~ 445 (805)
T PLN02724 380 -------FHIQGPIVTFNLKRADGSWVGHREVEKLA---SLSGIQLRTGCFCN----PGACAKYLGLSHKDLQANFEAGH 445 (805)
T ss_pred -------cccccCEEEEEEEcCCCCEeCHHHHHHHH---HhcCcEEeeccccC----chHHHHHcCCCHHHHHHHhhcCC
Confidence 012478999999752 12234433 34578888886533 2211 11112221111
Q ss_pred --------hcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 501 --------KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 501 --------~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+...|.||+|+|..++.+.++.|.++|++
T Consensus 446 ~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 446 VCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred ccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 0122358999999999988888888888864
No 215
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.84 E-value=1.4e-18 Score=182.72 Aligned_cols=286 Identities=14% Similarity=0.131 Sum_probs=185.1
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---c----CCCEEEEcCCCCcchHHHHHHh-c-----
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETV-L----- 261 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all---~----~Gd~VIv~~~~y~~t~~~~~~~-l----- 261 (532)
..+|.++...+|++++++++|.+++++++||++|+..+++.+. . +||+|++.++.|++........ .
T Consensus 63 ~~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~ 142 (379)
T TIGR00707 63 SNLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQ 142 (379)
T ss_pred ccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhh
Confidence 3557789999999999999999999999999999998887552 2 3799999999998743222111 0
Q ss_pred ---ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEECCCCCCCcc--
Q 009523 262 ---PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATPLNQ-- 332 (532)
Q Consensus 262 ---~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~-d---l~~I~~la~~~gi~lIvDet~a~~~~~-- 332 (532)
.....++.+++.+|++++++.+++ ++++|++++++|++|... + +++|.++|+++|+++|+||++......
T Consensus 143 ~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~ 221 (379)
T TIGR00707 143 KGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK 221 (379)
T ss_pred ccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch
Confidence 111123444555689999999987 699999987777777643 3 789999999999999999997632111
Q ss_pred ----cccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHH
Q 009523 333 ----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 406 (532)
Q Consensus 333 ----~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~ 406 (532)
.......|++ +++|.+++ | .+.|++++++++++.+...........++..+..+...++.+. ...++..+
T Consensus 222 ~~~~~~~~~~~d~~--t~sK~~~~-G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~ 297 (379)
T TIGR00707 222 FFAYEHYGIEPDII--TLAKGLGG-G-VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKE 297 (379)
T ss_pred hhhHHhcCCCCCEE--EEcccccC-C-cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1112234655 58999993 3 4678999999888887653222222345666666555555332 23445556
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
+.+.+.+.|++... .. +.. ...+.|.+++++++.+ ...|.+.|...++.+..+
T Consensus 298 ~~~~~~~~l~~~~~--~~---~~~----------~~~~~g~~~~~~~~~~---~~~~~~~l~~~Gv~v~~~--------- 350 (379)
T TIGR00707 298 KGDYFKERLEELGK--NY---PNK----------EVRGKGLMLGIELEAP---CKDIVKKALEKGLLVNCA--------- 350 (379)
T ss_pred HHHHHHHHHHHHHh--hC---CCC----------ccccCceEEEEEecCc---HHHHHHHHHHCCcEEeeC---------
Confidence 66667776665311 11 110 0122477899998643 345666665556554431
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..+.|||++....+++.++.+.++|+
T Consensus 351 ------------------~~~~lRi~~~~~~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 351 ------------------GPKVLRFLPPLIITKEEIDEAVSALE 376 (379)
T ss_pred ------------------CCCEEEEECCCcCCHHHHHHHHHHHH
Confidence 13689999876444444455544444
No 216
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.84 E-value=2.3e-18 Score=183.08 Aligned_cols=288 Identities=19% Similarity=0.163 Sum_probs=189.8
Q ss_pred CchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcc---------cCC
Q 009523 199 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---------KMG 265 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~---------~~G 265 (532)
.++...+|+++|+++.+ .+.+++++||++|+..++..+. .++|+|++.++.|++.......... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 46788999999999998 5788999999999999998763 5789999999999985433222111 112
Q ss_pred cEEEEeCCC-----------CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCC
Q 009523 266 ITATVIDPA-----------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 266 v~v~~vd~~-----------dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~ 328 (532)
.++..++.+ |+++|++.+++ .++++|+++..+|++|.+.+ +++|.++|++||+++|+||++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 345556655 78999998875 35889999888888899887 99999999999999999999764
Q ss_pred CC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHH--HHHhhhcCCCccHHHHHHHHHhHHHHH--
Q 009523 329 PL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI--RNLHHVLGGALNPNAAYLIIRGMKTLH-- 398 (532)
Q Consensus 329 ~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l--~~~~~~~G~~~~~~~a~l~l~~l~tl~-- 398 (532)
.. .........|++ |++|.+++ | ...|++++++++++.+ ...........++..+..+...++.+.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~ 312 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIV--TLGKGLGG-G-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE 312 (413)
T ss_pred CCcCcchhhHhhcCCCCCeE--EEcccccC-c-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 21 111122334655 67899997 3 4578888898888876 222211222345555555555555443
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCc
Q 009523 399 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPY 471 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------~~~~~~~l~~L~~~~ 471 (532)
...++..++.+++.+.|++.... ++. .. ...+.|.++++.+... ......|.+.|...+
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~~~~----~~~-~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 378 (413)
T cd00610 313 GLLENAAELGEYLRERLRELAEK----HPL-VG---------DVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERG 378 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhh----CCc-EE---------EeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCC
Confidence 23445556666666666653210 010 00 0124578999998643 134566776666556
Q ss_pred eeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 472 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 472 i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+.+..++ .+.+|+++.....++.++.+.++|++
T Consensus 379 v~v~~~~---------------------------~~~lR~~~~~~~t~~~i~~~~~~l~~ 411 (413)
T cd00610 379 LLLRPSG---------------------------GNVIRLLPPLIITEEEIDEGLDALDE 411 (413)
T ss_pred eEEeecC---------------------------CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 5444321 35799999887666555666655543
No 217
>PLN02368 alanine transaminase
Probab=99.84 E-value=9.2e-19 Score=186.16 Aligned_cols=221 Identities=14% Similarity=0.162 Sum_probs=150.4
Q ss_pred CCCCchh-HHHHHHHHHhhh----CC---CcEEEeCCH-HHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 196 GRYGNPT-TVVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 196 ~R~~~p~-~~~Le~~lA~l~----ga---~~~i~~sSG-~~Ai~~al~all-~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
.+|+.+. ...|+++||+++ |. ++.|++++| ++++..++.+++ ++||.|++++|+|..... .+...|
T Consensus 101 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~----~~~~~g 176 (407)
T PLN02368 101 GAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA----TISLLG 176 (407)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH----HHHHcC
Confidence 3454433 457888888776 42 234555555 589999999987 799999999999998653 344567
Q ss_pred cEEEEeCC-------CCHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 266 ITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 266 v~v~~vd~-------~dle~Le~al~~-----~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
.++..++. .|+++|++++++ .++|++++++|+||||.+++ +++|+++|+++|++||+||+|....
T Consensus 177 ~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 177 GTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 77666642 378999998863 15899999999999999998 4567788999999999999976532
Q ss_pred c-----ccc-c----c-------cCCcEEEECCcccc-CCCCCcEEEEEE---eChHHHHHHHHHhhhcCCCccHHHHHH
Q 009523 331 N-----QKA-L----S-------LGADLVLHSATKFI-GGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYL 389 (532)
Q Consensus 331 ~-----~~~-l----~-------~gaDivv~S~sK~l-gg~gd~~gG~lv---~~~~li~~l~~~~~~~G~~~~~~~a~l 389 (532)
. ..+ . . .+..++++|+||.| +-.| .+.||++ +++++++.+...... ..+.+....++
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~G-lRiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~a 334 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIF 334 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCc-cceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHH
Confidence 1 111 1 1 12458899999998 4454 4678888 478888888776422 23344444444
Q ss_pred HHHhHH--------------HHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009523 390 IIRGMK--------------TLHLRVQQQNSTALRMAKILEAHPKVK 422 (532)
Q Consensus 390 ~l~~l~--------------tl~~r~~~~~~~a~~la~~L~~~p~v~ 422 (532)
+...++ .+....+...+++..+.+.|++.|++.
T Consensus 335 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 335 MGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred HHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 444332 111223444566777888888877653
No 218
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-18 Score=185.00 Aligned_cols=213 Identities=16% Similarity=0.152 Sum_probs=140.4
Q ss_pred hhHHHHHHHHHhhhCC-------CcEEE---eCCHHHHHHHHHH---HhccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 201 PTTVVVEEKMSALEGA-------ESTVI---MASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga-------~~~i~---~sSG~~Ai~~al~---all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
....+||+++++++.. ++.|+ +.+|++|+..++. ++++|||+|++++|+|+... ..++..|.+
T Consensus 72 ~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~----~~~~~~G~~ 147 (404)
T PTZ00376 72 EGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHV----NIFKSAGLN 147 (404)
T ss_pred CCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCc
Confidence 4466788888886521 12343 5555577776654 67899999999999998855 345566777
Q ss_pred EEEeCC---C----CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCccc--
Q 009523 268 ATVIDP---A----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 333 (532)
Q Consensus 268 v~~vd~---~----dle~Le~al~~--~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~-- 333 (532)
+..++. + |++.++++++. .+++++++++|+||||.+++ +++|+++|++||+++|+|++|.......
T Consensus 148 ~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 227 (404)
T PTZ00376 148 VKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLD 227 (404)
T ss_pred eeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHH
Confidence 777764 2 68899888852 24678888999999999997 5577888999999999999986543211
Q ss_pred ----cc----ccC-CcEEEECCccccCCCCCcEEEEE---EeChHHHHHHH----HHhhhcCCCccHHHHHHHHHhHHH-
Q 009523 334 ----AL----SLG-ADLVLHSATKFIGGHNDVLAGSI---SGSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT- 396 (532)
Q Consensus 334 ----~l----~~g-aDivv~S~sK~lgg~gd~~gG~l---v~~~~li~~l~----~~~~~~G~~~~~~~a~l~l~~l~t- 396 (532)
+. ..+ ..+++.|+||.++.+|. +.||+ ++++++++.+. ........+.+...+.++...++.
T Consensus 228 ~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 306 (404)
T PTZ00376 228 KDAYAIRLFAERGVEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDP 306 (404)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCH
Confidence 11 111 34899999999996653 57776 56777655443 222222333344444444443321
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhC
Q 009523 397 ---------LHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 397 ---------l~~r~~~~~~~a~~la~~L~~~ 418 (532)
+....++..++++.+.+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 307 ELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1122234456667777788765
No 219
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=3.5e-18 Score=183.28 Aligned_cols=210 Identities=18% Similarity=0.198 Sum_probs=162.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---------ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al---------l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
.+...+||+++|+++|.+.+++++||++|+..++.++ ++|||+||++.++|.++...+ ...|.++++
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v----~~~G~~pv~ 137 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI----IQNGLVPVF 137 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEE
Confidence 4678899999999999999999999999999988875 488999999999998876443 345778777
Q ss_pred eCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--CcEE
Q 009523 271 IDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLV 342 (532)
Q Consensus 271 vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aDiv 342 (532)
+|.+ |++++++++++ +|++|++++ ++|...|+++|.++|+++|++||+|++++.+...+....| .|+.
T Consensus 138 vdvd~~~~~id~~~le~~i~~-~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~ 213 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSP-KTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIA 213 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCc-CCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceE
Confidence 7642 78999999987 799999965 4677889999999999999999999998765433322222 3899
Q ss_pred EECCc--cccCCCCCcEEEEEEeCh-HHHHHHHHHhhh-------------------------------------cC--C
Q 009523 343 LHSAT--KFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-------------------------------------LG--G 380 (532)
Q Consensus 343 v~S~s--K~lgg~gd~~gG~lv~~~-~li~~l~~~~~~-------------------------------------~G--~ 380 (532)
++|++ |.+..+. ||+++.++ ++.++++..+.. .| .
T Consensus 214 ~fSf~~~k~~~~ge---GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~ 290 (438)
T PRK15407 214 TLSFYPAHHITMGE---GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNL 290 (438)
T ss_pred EEeCCCCCCccccC---ceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccccc
Confidence 99885 5565432 68888765 444444432210 11 2
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 381 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
.++.+.|.+.+..|+.++.++++..++++++.+.|.+.+.
T Consensus 291 rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 291 KITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 4567788888999999999999999999999999987664
No 220
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.83 E-value=3e-18 Score=184.68 Aligned_cols=211 Identities=22% Similarity=0.225 Sum_probs=151.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
+++...+||++++++++.+.++++++|++|+..++.++++||| |+++++.|..+...+ ...|.+++.++.
T Consensus 76 ~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i----~~~G~~~v~v~~~~~~~ 150 (460)
T PRK13238 76 GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHI----ELNGATAVDLVIDEALD 150 (460)
T ss_pred CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHH----HHcCCEEEEEecccccc
Confidence 4567899999999999999999999999999999999999999 999998887655333 345666665542
Q ss_pred ----------CCHHHHHHhhcC---CCeeEEEEeCCCCCCC-cccC---HHHHHHHHHhCCCEEEEECCCCC--------
Q 009523 274 ----------ADMEGLEAALNN---NNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFAT-------- 328 (532)
Q Consensus 274 ----------~dle~Le~al~~---~~tklV~lesP~NptG-~v~d---l~~I~~la~~~gi~lIvDet~a~-------- 328 (532)
.|+++|++++++ .+|++|++++|+||+| .+.+ +++|.++|++||+++|+|+++..
T Consensus 151 ~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~ 230 (460)
T PRK13238 151 TGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQ 230 (460)
T ss_pred ccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhh
Confidence 478999999974 2699999999999998 7776 57899999999999999997521
Q ss_pred ---CCccccc-------ccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhh------hcCCCccHHHHHHHH
Q 009523 329 ---PLNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH------VLGGALNPNAAYLII 391 (532)
Q Consensus 329 ---~~~~~~l-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~------~~G~~~~~~~a~l~l 391 (532)
.+..... ....|+++.|.+|.+.++ .||+++.+ ++++++++.... .+|+ ++......+.
T Consensus 231 ~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g-~~~~~~~Ala 306 (460)
T PRK13238 231 REPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGG-LAGRDMEALA 306 (460)
T ss_pred ccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccC-cHHHHHHHHH
Confidence 1111111 124799999999987655 37888887 578888876531 1222 2333233333
Q ss_pred HhHHH--HHHHHHHHHHHHHHHHHHHHhC
Q 009523 392 RGMKT--LHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 392 ~~l~t--l~~r~~~~~~~a~~la~~L~~~ 418 (532)
.+++. -....+...+++++|.+.|.+.
T Consensus 307 ~~l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 307 VGLYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred hhHHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 34433 1223344445678889988874
No 221
>PLN02672 methionine S-methyltransferase
Probab=99.83 E-value=2.3e-18 Score=197.97 Aligned_cols=211 Identities=16% Similarity=0.120 Sum_probs=146.5
Q ss_pred HHHHHHHHHhhhCCC----cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 203 TVVVEEKMSALEGAE----STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~----~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
.+.+.+.+++.+|.+ +.|++++|+ +++..++.++++|||+|+++.|+|+... ..++..|.++..++.+
T Consensus 736 r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~----~~a~~~Ga~vv~Vpl~~e~ 811 (1082)
T PLN02672 736 RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYV----SAAKFLKANFRRIPTKSSD 811 (1082)
T ss_pred HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEeccccc
Confidence 678888888887752 357777776 7888889999999999999999998754 3445568888777642
Q ss_pred ----CHHHHHHhhcCCCeeEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc---------cc-c-
Q 009523 275 ----DMEGLEAALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---------KA-L- 335 (532)
Q Consensus 275 ----dle~Le~al~~~~tklV~lesP~-NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~---------~~-l- 335 (532)
|+++|++++++.+.++|++++|+ ||||.+++ +++|+++|++||++||+||+|...... .+ .
T Consensus 812 gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~ 891 (1082)
T PLN02672 812 GFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILS 891 (1082)
T ss_pred CCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHH
Confidence 57889999865335689999998 99999997 567788899999999999998632110 00 0
Q ss_pred cc------CCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCC-ccHHHHHHHHHhH--------HHHHH
Q 009523 336 SL------GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA-LNPNAAYLIIRGM--------KTLHL 399 (532)
Q Consensus 336 ~~------gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~-~~~~~a~l~l~~l--------~tl~~ 399 (532)
.. ...+++.|+||.++.+| .+.||+++++ ++++.++......+.. .+...+..++..+ +.+..
T Consensus 892 ~~~~~sks~nVIvL~SfSKkf~lpG-LRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e 970 (1082)
T PLN02672 892 RLKSSNPSFAVALLGGLSTELLSGG-HEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAE 970 (1082)
T ss_pred HhccccCCceEEEEeCcHHhhccHH-HHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 01 13478899999998777 4678999865 5888887654322221 2222222222211 12233
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 009523 400 RVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~ 418 (532)
..+...++.+.+.+.|+++
T Consensus 971 ~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 971 QKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHC
Confidence 3344567778888899876
No 222
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.83 E-value=5.7e-18 Score=179.66 Aligned_cols=285 Identities=19% Similarity=0.179 Sum_probs=183.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc----------CCCEEEEcCCCCcchHHHHHHhcc------
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----------AGGHIVTTTDCYRKTRIFIETVLP------ 262 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~----------~Gd~VIv~~~~y~~t~~~~~~~l~------ 262 (532)
.++..+.+++.++++.+.+.+++++||++|+..++..+.. .+++|++.+..|++..........
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 4678889999999998888999999999999999986631 347888888888874322111100
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCC-----
Q 009523 263 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL----- 330 (532)
Q Consensus 263 ---~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~----- 330 (532)
.....+..++..|+++|+++++..++++|++|+++||+|.+.| +++|.++|++||+++|+||++....
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~ 230 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKL 230 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0111234556679999999996337999999999999999998 9999999999999999999975311
Q ss_pred -cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHH
Q 009523 331 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 407 (532)
Q Consensus 331 -~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~~ 407 (532)
.........|+++ ++|.++++. ...|++++++++++.+...........++..+..+...++.+.. ..++..+.
T Consensus 231 ~~~~~~~~~pd~~~--~sK~l~~g~-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 231 LAHDHEGVKPDIVL--LGKALSGGL-YPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred hHHHhcCCCCCEEE--EcccccCCC-cCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 1111223357776 679998643 24688889999888775432211122356666665555554431 12233344
Q ss_pred HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCceeecCCCcccc
Q 009523 408 ALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 408 a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~~~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
.+.+.+.|++. +.+..+ ++.|.+++++++. +......|.+.|...++.+..+
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~~------------------~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~----- 364 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKEI------------------RGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPT----- 364 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEEE------------------ecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeec-----
Confidence 44455555442 211111 2357788998864 2234556666665445443321
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
.++.|||+..+ ++.++.++.|.++|.+
T Consensus 365 ----------------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 365 ----------------------HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred ----------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 14689999654 3455666666666653
No 223
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=3.5e-18 Score=180.81 Aligned_cols=287 Identities=16% Similarity=0.159 Sum_probs=185.2
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh----ccCCC----EEEEcCCCCcchHHHHHHhcc--c----
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLP--K---- 263 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al----l~~Gd----~VIv~~~~y~~t~~~~~~~l~--~---- 263 (532)
+.++...+|+++|+++.+.+.+++++||++|+..+++.+ ..+|| +||+.++.|++........-. .
T Consensus 70 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 149 (389)
T PRK01278 70 YRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG 149 (389)
T ss_pred cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc
Confidence 567888999999999987788999999999999998866 45676 899999999985433211100 0
Q ss_pred C---CcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc----CHHHHHHHHHhCCCEEEEECCCCCCCc-----
Q 009523 264 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN----- 331 (532)
Q Consensus 264 ~---Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~----dl~~I~~la~~~gi~lIvDet~a~~~~----- 331 (532)
+ .-.+..++..|++++++++++ ++++|++|.++|++|... .+++|.++|++||+++|+||++.....
T Consensus 150 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 228 (389)
T PRK01278 150 FGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF 228 (389)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce
Confidence 0 011233455689999999987 799999999888888443 488999999999999999999763211
Q ss_pred -ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHHH
Q 009523 332 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTA 408 (532)
Q Consensus 332 -~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~~a 408 (532)
........|++ |++|.++++ ...|++++++++++.+...........++..++.++..++.+.. ..++..++.
T Consensus 229 ~~~~~~~~pdi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 229 AHEWAGVTPDIM--AVAKGIGGG--FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred eecccCCCCCEE--EEehhccCC--cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 11112234654 689999843 46788889888877765433222233567777776666665421 233444555
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
+++.+.|++... .+|.+. ...++.|.++++++.. ....|.+.|...++.+..|
T Consensus 305 ~~l~~~l~~l~~----~~~~~~---------~~v~g~G~~~~i~~~~---~~~~~~~~l~~~GV~~~p~----------- 357 (389)
T PRK01278 305 LYLKQKLEGLVD----RFPDVI---------EEVRGKGLLLGLKCVV---PNRDLVQALRDEGLLTVGA----------- 357 (389)
T ss_pred HHHHHHHHHHHh----hCCCce---------eeEecccEEEEEEEec---CHHHHHHHHHHCCeEEeec-----------
Confidence 555555554210 011100 0123457788888853 2345666554445443322
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhhC
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHAI 532 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~l 532 (532)
..+.|||++.+ ++.++.++.|+++|+++
T Consensus 358 ----------------~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 358 ----------------GDNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred ----------------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 14689998654 44566666777776643
No 224
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=2e-18 Score=186.32 Aligned_cols=220 Identities=18% Similarity=0.126 Sum_probs=143.6
Q ss_pred CCCCCCCchhHHH-HHHHHHhhhCCC-cEE-Ee---CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcc----
Q 009523 193 FEYGRYGNPTTVV-VEEKMSALEGAE-STV-IM---ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP---- 262 (532)
Q Consensus 193 ~~Y~R~~~p~~~~-Le~~lA~l~ga~-~~i-~~---sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~---- 262 (532)
|..|.......+. .++++++++|++ +.+ +. +||++|+.+++.+++++||+|++.+..|++.........+
T Consensus 71 ~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~ 150 (452)
T PTZ00094 71 YYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVS 150 (452)
T ss_pred ccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccc
Confidence 3333333333442 457999999984 222 33 6899999999999999999999999999886532211100
Q ss_pred --cCCcEEEEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 263 --KMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 263 --~~Gv~v~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
..++++..++. .|+++|++++++.++++|++. ++.+|...|+++|.++|+++|+++++|++++.+..
T Consensus 151 ~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~ 228 (452)
T PTZ00094 151 ATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGV 228 (452)
T ss_pred cceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCC
Confidence 11233333332 289999999965457787763 34599999999999999999999999999876543
Q ss_pred -ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-----hhcCCCccHHHHHHHHHhHHHH-----HHH
Q 009523 332 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAAYLIIRGMKTL-----HLR 400 (532)
Q Consensus 332 -~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~~~~~~~a~l~l~~l~tl-----~~r 400 (532)
..+.. ++|+++.|+||+++|+. ||+++.++++.+.+.... ..+.+..++...+.+..+++.+ ...
T Consensus 229 ~~~~~~-~~D~l~~S~hK~l~GP~---Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~ 304 (452)
T PTZ00094 229 LPSPFP-YADVVTTTTHKSLRGPR---SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEY 304 (452)
T ss_pred CCCCCC-CCcEEEcCCccCCCCCC---ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHH
Confidence 12333 79999999999997664 566666665444332211 1111233444333334444443 234
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 009523 401 VQQQNSTALRMAKILEAH 418 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~ 418 (532)
.++..++++++.+.|.+.
T Consensus 305 ~~~i~~l~~~l~~~L~~~ 322 (452)
T PTZ00094 305 AKQVLKNAKALAAALEKR 322 (452)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 456667888888888764
No 225
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.82 E-value=2.6e-18 Score=186.58 Aligned_cols=145 Identities=17% Similarity=0.249 Sum_probs=107.7
Q ss_pred cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-------CCHHHHHHhhcC
Q 009523 218 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN 285 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~a-----ll~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-------~dle~Le~al~~ 285 (532)
+++++++|++|+..++.+ +++|||+|++++|.|....... .+...|+.++.++. .|+++|++++++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~--~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIP--ELPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHH--HHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 355555566999988876 6899999999999998755332 13334566655542 267899998877
Q ss_pred CCeeEEEEeCCCCCCCcccC---HHHHHHHHHh--CCCEEEEECCCCCCCc-c-cccc--cCCcEEEECCccccCCCCCc
Q 009523 286 NNVSLFFTESPTNPFLRCVD---VKLVSDLCHK--KGAIVCIDGTFATPLN-Q-KALS--LGADLVLHSATKFIGGHNDV 356 (532)
Q Consensus 286 ~~tklV~lesP~NptG~v~d---l~~I~~la~~--~gi~lIvDet~a~~~~-~-~~l~--~gaDivv~S~sK~lgg~gd~ 356 (532)
++|+|++++|+||||.+++ +++|+++|++ ++++||+||+|..... . .... ....+++.|+||+++..|.
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~- 318 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGW- 318 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHh-
Confidence 7999999999999999998 6678888854 5999999999876432 1 1111 1245899999999987764
Q ss_pred EEEEEEeChH
Q 009523 357 LAGSISGSGK 366 (532)
Q Consensus 357 ~gG~lv~~~~ 366 (532)
+.||++++++
T Consensus 319 RlG~i~~~~~ 328 (527)
T PRK09275 319 RLGVIALHED 328 (527)
T ss_pred HHhhhhcCch
Confidence 5788888775
No 226
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.82 E-value=6.2e-19 Score=179.73 Aligned_cols=167 Identities=19% Similarity=0.262 Sum_probs=132.1
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
+.+--.++.....++++.+|+++|+++++++++| ++++..++.+++++||+|++++++|.+....+ ...|+++.+
T Consensus 50 ~~d~l~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~----~~~g~~~~~ 125 (294)
T cd00615 50 GLDDLLDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGL----VLSGAVPVY 125 (294)
T ss_pred CCCCCCCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHH----HHCCCEEEE
Confidence 3444455677789999999999999888875555 58999999999999999999999998866443 345777766
Q ss_pred eCC-----------CCHHHHHHhhcC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC------cc
Q 009523 271 IDP-----------ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQ 332 (532)
Q Consensus 271 vd~-----------~dle~Le~al~~-~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~------~~ 332 (532)
++. .|++++++++++ .++++|++++| |++|.+.|+++|+++|+++|+++++|++++..+ ..
T Consensus 126 v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~ 204 (294)
T cd00615 126 LKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPS 204 (294)
T ss_pred ecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCc
Confidence 642 378999999864 26899999998 699999999999999999999999999986532 22
Q ss_pred cccccCCcEEEECCccccCCCCCcEEEEEEeCh
Q 009523 333 KALSLGADLVLHSATKFIGGHNDVLAGSISGSG 365 (532)
Q Consensus 333 ~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~ 365 (532)
.....|+|+++.|+||+++|.. .+|++..+.
T Consensus 205 ~~~~~~~div~~S~hK~l~g~~--~~~~l~~~~ 235 (294)
T cd00615 205 SAAMAGADIVVQSTHKTLPALT--QGSMIHVKG 235 (294)
T ss_pred chhhcCCcEEEEchhcccchHh--HHHHHHhCC
Confidence 3345689999999999998653 345555544
No 227
>PRK08637 hypothetical protein; Provisional
Probab=99.81 E-value=3.2e-17 Score=173.52 Aligned_cols=288 Identities=13% Similarity=0.135 Sum_probs=169.1
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhC-----C--C--cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhc
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEG-----A--E--STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL 261 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~g-----a--~--~~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l 261 (532)
.+.|+. ......|++.+++... . + +.|++++| ++++.+++.+++++||+|++++|+|+.....+ .
T Consensus 37 ~~~Y~~--~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~---~ 111 (388)
T PRK08637 37 IFPYAP--PQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTF---N 111 (388)
T ss_pred ccCCCC--CCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH---H
Confidence 345553 2335667777776541 1 2 23455555 59999999999999999999999998754322 1
Q ss_pred ccCCcEEEEeCC------CCHHHHHHhhc---CCCeeEEEEeCCCCCCCcccCH---HHHHHHHHh-----CCCEEEEEC
Q 009523 262 PKMGITATVIDP------ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVDV---KLVSDLCHK-----KGAIVCIDG 324 (532)
Q Consensus 262 ~~~Gv~v~~vd~------~dle~Le~al~---~~~tklV~lesP~NptG~v~dl---~~I~~la~~-----~gi~lIvDe 324 (532)
...|.++..++. .|++++++.++ +..++++++++|+||||.+++. ++|+++|++ +++++|+||
T Consensus 112 ~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De 191 (388)
T PRK08637 112 TRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDD 191 (388)
T ss_pred HhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 235777776653 26889988876 2246678888999999999984 566666654 899999999
Q ss_pred CCCCCCcc----cc-c----cc-CCc--EEEECCccccCCCCCcEEEEEEe------ChHHHHHHHHHh----hhcCCCc
Q 009523 325 TFATPLNQ----KA-L----SL-GAD--LVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRNLH----HVLGGAL 382 (532)
Q Consensus 325 t~a~~~~~----~~-l----~~-gaD--ivv~S~sK~lgg~gd~~gG~lv~------~~~li~~l~~~~----~~~G~~~ 382 (532)
+|...... .+ . +. +.. +++.|+||.++.+| .+.||++. ++++++.+.... .......
T Consensus 192 ~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG-lRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 270 (388)
T PRK08637 192 AYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWG-FRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNG 270 (388)
T ss_pred cchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcc-cceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCC
Confidence 97643211 01 1 11 122 23459999888776 46788874 357777665321 1111233
Q ss_pred cHHHHHHHHHhHHH--HHHHH----HHHHHHHHHHHHHHHhCC---CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEE
Q 009523 383 NPNAAYLIIRGMKT--LHLRV----QQQNSTALRMAKILEAHP---KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 453 (532)
Q Consensus 383 ~~~~a~l~l~~l~t--l~~r~----~~~~~~a~~la~~L~~~p---~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l 453 (532)
+.....++...++. +...+ ....++...+.+.|++++ .+ .+ +| ...|.++|+.+
T Consensus 271 s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~-~~-~~---------------~~~g~~~~~~l 333 (388)
T PRK08637 271 PHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAW-QA-YP---------------FNSGYFMCLKL 333 (388)
T ss_pred CcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc-cc-cc---------------ccceEEEEecC
Confidence 44444443333321 11111 122233344455665542 11 11 11 11456788888
Q ss_pred cCCHHHHHHHHHHc-CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHH
Q 009523 454 DGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQAL 529 (532)
Q Consensus 454 ~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed---~~dli~dL~~AL 529 (532)
++ .....|.+.+ +..++++.. ...+++||+++..+ .++.++.|.+++
T Consensus 334 ~~--~~~~~l~~~l~~~~gv~~~~---------------------------~~~~~iRi~~~~~~~~~i~~~~~~l~~~~ 384 (388)
T PRK08637 334 KG--VDAEELRVHLLEKYGIGTIA---------------------------LNETDLRIAFSCVEEEDIPELFDSIYKAI 384 (388)
T ss_pred Ch--HHHHHHHHHHhhhcceEEEe---------------------------ccCCceEEEeecCCHHHHHHHHHHHHHHH
Confidence 63 3456677666 344554321 01468999998644 445556666666
Q ss_pred hh
Q 009523 530 HA 531 (532)
Q Consensus 530 ~~ 531 (532)
.+
T Consensus 385 ~~ 386 (388)
T PRK08637 385 KD 386 (388)
T ss_pred Hh
Confidence 54
No 228
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.81 E-value=1e-17 Score=180.57 Aligned_cols=283 Identities=19% Similarity=0.252 Sum_probs=184.1
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----C
Q 009523 203 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----D 275 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~----d 275 (532)
..++++.+++++|.+ ..+++++|++++..++.++ ..+||+|+++++.|+.+...+.......|++++.++.+ |
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d 193 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTD 193 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCC
Confidence 444557889999974 4556777778888888887 47999999999999887766655556678998888754 7
Q ss_pred HHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE--ECCCCCCCcccccccCCcEEEECCccc----
Q 009523 276 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKF---- 349 (532)
Q Consensus 276 le~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv--Det~a~~~~~~~l~~gaDivv~S~sK~---- 349 (532)
+++|++++++ +|++|++++| |+||.+.|+++|.++|+++|+++++ |... .+....+.++|+|+++.|.+|+
T Consensus 194 ~~~l~~~i~~-~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~~~~~~D~~~~s~~k~~~~~ 270 (447)
T PRK00451 194 LEALEAAVDD-DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGLLKPPGEYGADIVVGEGQPLGIPL 270 (447)
T ss_pred HHHHHHhcCC-CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hccCCCcccCCCCEEEECCCcCCCCC
Confidence 8999999987 6999999999 8999999999999999999999998 5442 2222345578999999987775
Q ss_pred -cCCCCCcEEEEEEeChHHHHHHHH-------------------------HhhhcCC-Cc---cH---HHHHHHHH--hH
Q 009523 350 -IGGHNDVLAGSISGSGKLVTQIRN-------------------------LHHVLGG-AL---NP---NAAYLIIR--GM 394 (532)
Q Consensus 350 -lgg~gd~~gG~lv~~~~li~~l~~-------------------------~~~~~G~-~~---~~---~~a~l~l~--~l 394 (532)
++|++ +|+++.++++++.+.. .+...+. .. .+ ..++..++ +-
T Consensus 271 ~~~Gpg---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~ 347 (447)
T PRK00451 271 SFGGPY---LGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGP 347 (447)
T ss_pred CCCCCC---chHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCH
Confidence 55554 7888888877776310 0000010 00 11 12221111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009523 395 KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 474 (532)
Q Consensus 395 ~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~v 474 (532)
+.+....++..++++++.+.|++.+++... ++ + +..++.+.++.+ ...+.+.|...++.+
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~----~-----------~~~~~~v~~~~~---~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGGVELF--DG----P-----------FFNEFVVRLPKP---AEEVNEALLEKGILG 407 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CC----C-----------eEEEEEEecCCC---HHHHHHHHHhcCCCC
Confidence 234455566778888888999887665321 11 0 112233444322 345566655444322
Q ss_pred cCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 475 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 475 s~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.+- ..+ |. + +. .+.+|+|++..++++.++.+.++|++
T Consensus 408 ~~~------~~~----~~--~-------~~-~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 408 GYD------LGR----YY--P-------EL-GNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred Ccc------ccc----cc--C-------Cc-CCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 110 001 00 0 11 36899999876777777777777764
No 229
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=9.3e-18 Score=177.59 Aligned_cols=288 Identities=16% Similarity=0.217 Sum_probs=185.5
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCC-------CEEEEcCCCCcchHHHHHHhc------
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAG-------GHIVTTTDCYRKTRIFIETVL------ 261 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~G-------d~VIv~~~~y~~t~~~~~~~l------ 261 (532)
...|.++...+|+++|+++.+.+.+++++||++|+..+++.+...+ ++|++.++.|++........-
T Consensus 75 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 154 (396)
T PRK02627 75 SNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQ 154 (396)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccc
Confidence 4456789999999999999888889999999999999999765443 679999999987432211111
Q ss_pred ---ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc-ccC---HHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 262 ---PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-CVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 262 ---~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~-v~d---l~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
......+..++..|++++++++.+ ++++|++++++||+|. +.+ +++|.++|+++|+++|+||++.....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~ 233 (396)
T PRK02627 155 EGFEPLVEGFIYVPFNDIEALKAAITD-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK 233 (396)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhcCC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc
Confidence 000112344556689999999976 7999999999999984 444 78999999999999999999763211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHH
Q 009523 332 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 406 (532)
Q Consensus 332 ---~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~ 406 (532)
........|++ +++|.+++ | ...|++++++++++.+...........++..++.+...++.+.. .+++..+
T Consensus 234 ~~~~~~~~~~pdi~--t~sK~~~~-G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~ 309 (396)
T PRK02627 234 LFAYQHYGIEPDIM--TLAKGLGG-G-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAE 309 (396)
T ss_pred eeeehhcCCCCCEE--EEcchhhC-C-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 11122234654 58999994 3 56788999988887775422222233567777766666664432 2333444
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
+.+++.+.|.+... .+|.. ...++.|.+++++++. ....|.+.+...++.+..+
T Consensus 310 ~~~~~~~~l~~~~~----~~~~~----------~~~~~~g~~~~i~~~~---~~~~~~~~l~~~Gv~v~~~--------- 363 (396)
T PRK02627 310 VGEYLRAKLRELLE----KYPGI----------KEVRGLGLMIGIELDR---PAAEIVKKALEKGLLINVT--------- 363 (396)
T ss_pred HHHHHHHHHHHHHH----hCCCe----------eeeccCcEEEEEEecC---cHHHHHHHHHHCCeEEeec---------
Confidence 45555555543210 01111 0113457889999842 2455666655445544332
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
..+.|||++.+ ++.++.++.|.++|+.
T Consensus 364 ------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 364 ------------------GDNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred ------------------CCCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 13579998753 4455566666666654
No 230
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.81 E-value=1.1e-17 Score=177.32 Aligned_cols=213 Identities=14% Similarity=0.111 Sum_probs=137.1
Q ss_pred hhHHHHHHHHHhhhCC-------CcEE--EeCCH-HHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 201 PTTVVVEEKMSALEGA-------ESTV--IMASG-MSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga-------~~~i--~~sSG-~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
....+|++++++++.. ++.+ ++++| ++|+..++..+ ++|||+|++++|+|..... .++..|+++
T Consensus 69 ~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~----~~~~~g~~~ 144 (396)
T PRK09257 69 EGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA----IFEAAGLEV 144 (396)
T ss_pred CCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH----HHHHcCCcE
Confidence 4456788888887521 2222 55555 59999998665 5899999999999998653 445567777
Q ss_pred EEeCC-------CCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----
Q 009523 269 TVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 332 (532)
Q Consensus 269 ~~vd~-------~dle~Le~al~~--~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~---- 332 (532)
+.++. .|+++++++++. .+++++++++|+||||.+++ +++|+++|++||+++|+|++|......
T Consensus 145 v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~ 224 (396)
T PRK09257 145 KTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEED 224 (396)
T ss_pred EEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHH
Confidence 76642 278899888752 13567777999999999998 557888899999999999998654321
Q ss_pred -ccc---c-c-CCcEEEECCccccCCCCCcEEEEEEe---ChHHH----HHHHHHhhhcCCCccHHHHHHHHHhHH----
Q 009523 333 -KAL---S-L-GADLVLHSATKFIGGHNDVLAGSISG---SGKLV----TQIRNLHHVLGGALNPNAAYLIIRGMK---- 395 (532)
Q Consensus 333 -~~l---~-~-gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li----~~l~~~~~~~G~~~~~~~a~l~l~~l~---- 395 (532)
.++ . . ...+++.|+||.++.+| .+.||+++ +++.+ ..++..........+...+.++.+.++
T Consensus 225 ~~~~~~~~~~~~~vi~i~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 303 (396)
T PRK09257 225 AYGLRAFAAAGLELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPEL 303 (396)
T ss_pred HHHHHHHHhcCCcEEEEEEcCCcCcccc-ccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHH
Confidence 111 1 1 23588999999999766 45788762 44433 333333222223334444333333222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 396 ------TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 396 ------tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.+....++..++.+.+.+.|+++
T Consensus 304 ~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 304 RAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12222334456666777777765
No 231
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.5e-17 Score=167.29 Aligned_cols=223 Identities=17% Similarity=0.174 Sum_probs=154.1
Q ss_pred CchhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 199 GNPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~g--------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
+.......|+++|+++. +++++++++..+||..++.++.+||..|++++|.|+- +...+...|++|++
T Consensus 101 ps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~----Y~~~a~~~~lEVR~ 176 (447)
T KOG0259|consen 101 PSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPL----YDTRAIYSGLEVRY 176 (447)
T ss_pred CccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCch----HHHhhhhcCceeEe
Confidence 45567778899998843 3466666666799999999999999999999999974 22345667999999
Q ss_pred eCCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccc-
Q 009523 271 IDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL- 335 (532)
Q Consensus 271 vd~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l- 335 (532)
+|.. |++.+|+++++ +|.++++.+|+||+|.++. +++|+++|+++|+++|.||+|.-.+. +-|.
T Consensus 177 ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg 255 (447)
T KOG0259|consen 177 YDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMG 255 (447)
T ss_pred ecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchh
Confidence 8742 89999999988 7999999999999999987 78999999999999999999754221 1111
Q ss_pred ---ccCCcEEEECCccccCCCCCcEEEEEEeCh--------HHHHHHHHHhhhcCCCccHHHHHH---HHHhHH-HHHHH
Q 009523 336 ---SLGADLVLHSATKFIGGHNDVLAGSISGSG--------KLVTQIRNLHHVLGGALNPNAAYL---IIRGMK-TLHLR 400 (532)
Q Consensus 336 ---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--------~li~~l~~~~~~~G~~~~~~~a~l---~l~~l~-tl~~r 400 (532)
..-..+.+.+.+|-+--+|.. .||++..+ ..++.+........+......+++ +.+.-+ -+..+
T Consensus 256 ~fssiVPVitlggisKrW~VPGWR-lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~ 334 (447)
T KOG0259|consen 256 KFSSIVPVITLGGISKRWIVPGWR-LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKK 334 (447)
T ss_pred hccccCceEeecccccccccCCce-eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHH
Confidence 122357888999977777764 67777532 233444444332222111111111 111111 13344
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009523 401 VQQQNSTALRMAKILEAHPKVKRVHYP 427 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v~~V~~P 427 (532)
..-...|++-..++|++.|.+....-|
T Consensus 335 ~~~lk~na~l~y~~Lk~IP~l~cp~kP 361 (447)
T KOG0259|consen 335 LSFLKSNADLCYSRLKDIPCLTCPVKP 361 (447)
T ss_pred HHHHHhhHHHHHHHHhcCCCcccCcCC
Confidence 455567788888999998876533333
No 232
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.80 E-value=2.8e-17 Score=178.34 Aligned_cols=145 Identities=17% Similarity=0.249 Sum_probs=107.9
Q ss_pred cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC------------CCHHHHH
Q 009523 218 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------------ADMEGLE 280 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~a-----ll~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~------------~dle~Le 280 (532)
+++++++|++|+..++.+ ++.|||+|+++.|.|........ +...|++++.++. .|.++|+
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 455566666999988876 78999999999999987554321 3344666665542 2568899
Q ss_pred HhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhC--CCEEEEECCCCCCCc--cccccc--CCcEEEECCccccC
Q 009523 281 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLN--QKALSL--GADLVLHSATKFIG 351 (532)
Q Consensus 281 ~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~--gi~lIvDet~a~~~~--~~~l~~--gaDivv~S~sK~lg 351 (532)
+++++ ++|+|++++|+||||.+++ +++|+++|+++ +++||+||+|..... ...... ...+++.|+||++|
T Consensus 235 ~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 235 KLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred HhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence 88776 7999999999999999998 56778889876 899999999875432 111111 23589999999998
Q ss_pred CCCCcEEEEEEeChH
Q 009523 352 GHNDVLAGSISGSGK 366 (532)
Q Consensus 352 g~gd~~gG~lv~~~~ 366 (532)
..|. +.|+++++++
T Consensus 314 ~~G~-RlG~i~~~~~ 327 (521)
T TIGR03801 314 ATGW-RLGTIALHKD 327 (521)
T ss_pred Cchh-hhhhhhcCch
Confidence 7764 5788888754
No 233
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.80 E-value=2.1e-17 Score=176.14 Aligned_cols=212 Identities=17% Similarity=0.183 Sum_probs=152.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
+++...+||+++++++|.+.++++++|++|+..+++++++|||.| ++++.|..+...+ ...|.++++++.
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i----~~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHI----EANGAVPVDLVIDEAHD 125 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHH----HhCCCEeEEEecccccc
Confidence 456788999999999999999999999999999999999999987 5778887765333 334555554432
Q ss_pred ----------CCHHHHHHhhcCC---CeeEEEEeCCCCCC-CcccCH---HHHHHHHHhCCCEEEEECCCCC--------
Q 009523 274 ----------ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVDV---KLVSDLCHKKGAIVCIDGTFAT-------- 328 (532)
Q Consensus 274 ----------~dle~Le~al~~~---~tklV~lesP~Npt-G~v~dl---~~I~~la~~~gi~lIvDet~a~-------- 328 (532)
.|+++|++++++. ++++|++++|+||+ |.+.++ ++|.++|++||++||.|++...
T Consensus 126 ~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~ 205 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKE 205 (431)
T ss_pred cccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhc
Confidence 3789999999862 38999999999998 888864 5789999999999999999321
Q ss_pred ---CCccccc-------ccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhh-----cCCCccHHHHHHHHH
Q 009523 329 ---PLNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----LGGALNPNAAYLIIR 392 (532)
Q Consensus 329 ---~~~~~~l-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~-----~G~~~~~~~a~l~l~ 392 (532)
.+...+. ....|.+..|++|..+.+ +||++++++ +++++++..... ..+.++......+..
T Consensus 206 r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~ 282 (431)
T cd00617 206 REEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQ 282 (431)
T ss_pred ccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHH
Confidence 1111111 124789999999987765 489999986 588888753311 112233333333333
Q ss_pred hHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009523 393 GMKTL--HLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 393 ~l~tl--~~r~~~~~~~a~~la~~L~~~ 418 (532)
+++.. ...+++..++++++.+.|++.
T Consensus 283 gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 283 GLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 55332 244555666778899999876
No 234
>PRK07505 hypothetical protein; Provisional
Probab=99.80 E-value=8.6e-17 Score=171.00 Aligned_cols=192 Identities=20% Similarity=0.194 Sum_probs=135.9
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc----cCCC-EEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all----~~Gd-~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
++..+..++++++|+++.+. +.++++||++|+..++..+. .+|+ .||+.+..|++.......... .+.++..+
T Consensus 87 ~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~ 164 (402)
T PRK07505 87 RVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETI 164 (402)
T ss_pred hhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEe
Confidence 35677889999999999998 88999999999988875432 2233 365666666664432222222 35678888
Q ss_pred CCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCC--------CCcccccc---cCCc
Q 009523 272 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--------PLNQKALS---LGAD 340 (532)
Q Consensus 272 d~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~--------~~~~~~l~---~gaD 340 (532)
+..|++++++++++ +++++++++|+||+|.+.|+++|.++|+++|+++|+||+++. ++...... ....
T Consensus 165 ~~~d~~~l~~~~~~-~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~ 243 (402)
T PRK07505 165 DHNDLDALEDICKT-NKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERT 243 (402)
T ss_pred CCCCHHHHHHHHhc-CCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCe
Confidence 88999999999876 578899999999999999999999999999999999999732 11111111 1234
Q ss_pred EEEECCccccCCCCCcEEEEEE-eChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHH
Q 009523 341 LVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMK 395 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~ 395 (532)
+++.|++|.+++. ||+++ +++++++.++.... .+++.+++..+..+...++
T Consensus 244 i~~~s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 244 IIAASLGKAFGAS----GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred EEEEechhhhhcc----CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 7778999999865 46765 47788887766433 2334455555555444444
No 235
>PLN02397 aspartate transaminase
Probab=99.79 E-value=4.3e-17 Score=174.56 Aligned_cols=214 Identities=15% Similarity=0.157 Sum_probs=136.1
Q ss_pred chhHHHHHHHHHhhhCCC-------c-E----EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 200 NPTTVVVEEKMSALEGAE-------S-T----VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~-------~-~----i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
.....+|++++++++... + + ++.++|+.++...+..++.|||+|++++|+|+.... .++..|.+
T Consensus 90 ~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~----~~~~~g~~ 165 (423)
T PLN02397 90 IEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN----IFRDAGVP 165 (423)
T ss_pred cCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH----HHHHcCCe
Confidence 345667888888876321 2 2 223444445555666666799999999999987553 34556777
Q ss_pred EEEeCC-------CCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCccc--
Q 009523 268 ATVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 333 (532)
Q Consensus 268 v~~vd~-------~dle~Le~al~~--~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~-- 333 (532)
+..++. .|++.+++.++. .+++++++++|+||||.+++ +++|+++|+++|+++|+||+|.......
T Consensus 166 ~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~ 245 (423)
T PLN02397 166 VRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLD 245 (423)
T ss_pred EEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchh
Confidence 766642 268878777752 26899999999999999997 4567888899999999999986543211
Q ss_pred ----c---cc-cC-CcEEEECCccccCCCCCcEEEEEE---eChHHHHHH----HHHhhhcCCCccHHHHHHHHHhHHH-
Q 009523 334 ----A---LS-LG-ADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQI----RNLHHVLGGALNPNAAYLIIRGMKT- 396 (532)
Q Consensus 334 ----~---l~-~g-aDivv~S~sK~lgg~gd~~gG~lv---~~~~li~~l----~~~~~~~G~~~~~~~a~l~l~~l~t- 396 (532)
+ .. .+ ..+++.|+||.++..|. +.||++ +++++++.+ .........+.+...+.++...++.
T Consensus 246 ~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~-RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~ 324 (423)
T PLN02397 246 ADAQSVRMFVEDGHEILVAQSYAKNMGLYGE-RVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDP 324 (423)
T ss_pred hhhHHHHHHHhcCCcEEEEEECcccCCCccc-cceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH
Confidence 1 11 12 24889999999997664 567763 355555433 3333222223344444444333321
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhC
Q 009523 397 ---------LHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 397 ---------l~~r~~~~~~~a~~la~~L~~~ 418 (532)
+....++..++++.+.+.|+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 325 ELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222334456677777888775
No 236
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.78 E-value=9.9e-17 Score=168.88 Aligned_cols=252 Identities=18% Similarity=0.172 Sum_probs=166.2
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc-cCC-CEEEEcCCCCcchHHHHHHhccc------C---C
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRKTRIFIETVLPK------M---G 265 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all-~~G-d~VIv~~~~y~~t~~~~~~~l~~------~---G 265 (532)
...++...+|.+.+++..+.+.+++++||++|+..+++... -+| ++|++.++.|++........... + .
T Consensus 67 ~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~ 146 (377)
T PRK02936 67 LFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLL 146 (377)
T ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCC
Confidence 34567777888888887766788999999999999998532 244 67888888888643211111100 0 1
Q ss_pred cEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc------cccc
Q 009523 266 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QKAL 335 (532)
Q Consensus 266 v~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~------~~~l 335 (532)
..+..++.+|++++++.+.+ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+||++..... ....
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~ 225 (377)
T PRK02936 147 PGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQF 225 (377)
T ss_pred CCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhh
Confidence 13445666789999999986 6999999999998887643 89999999999999999999753211 1111
Q ss_pred ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHH
Q 009523 336 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAK 413 (532)
Q Consensus 336 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~ 413 (532)
....|++ +++|.+++ | ..+|++++++++.+.+...........++..+..+...++.+. ..+++..++.+++.+
T Consensus 226 ~~~~di~--t~sK~l~~-G-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~ 301 (377)
T PRK02936 226 GLDPDIV--TVAKGLGN-G-IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQ 301 (377)
T ss_pred CCCCcEE--EEcccccC-C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 2234655 58999994 3 4678999999888877543222222356777777666666542 344555566777777
Q ss_pred HHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009523 414 ILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 474 (532)
Q Consensus 414 ~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~v 474 (532)
.|++. +.+..+ ++.|.+++++++.. ...+.+.+...++.+
T Consensus 302 ~L~~~~~~~~~~~~v------------------~~~g~~~~i~~~~~---~~~~~~~l~~~gv~v 345 (377)
T PRK02936 302 KLQEELEHLECVKNI------------------RGKGLMIGIECTEE---VAPVIEQLREEGLLV 345 (377)
T ss_pred HHHHHHhhCCcEEeE------------------eecceEEEEEecch---HHHHHHHHHHCCeEE
Confidence 76652 222111 23467899999743 445666655445433
No 237
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=2.9e-17 Score=168.94 Aligned_cols=290 Identities=17% Similarity=0.209 Sum_probs=198.2
Q ss_pred CCCCCCCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhccC-----CCEEEEcCCCCcch-HHH--------H
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRKT-RIF--------I 257 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~g-a~~~i~~sSG~~Ai~~al~all~~-----Gd~VIv~~~~y~~t-~~~--------~ 257 (532)
|.-.-|.++...+|.++|+++.+ .+.+++++||+||++.+++...+. ..+||.....|++- ... +
T Consensus 76 h~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky 155 (404)
T COG4992 76 HVSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKY 155 (404)
T ss_pred hcccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhh
Confidence 44455788999999999999996 889999999999999999855322 23788888888872 110 1
Q ss_pred HHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC----
Q 009523 258 ETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 329 (532)
Q Consensus 258 ~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~---- 329 (532)
...+...--.+++++.+|++++++++++ +|.+|++|......|.+.+ ++++.++|++||+++|.||++...
T Consensus 156 ~~~F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG 234 (404)
T COG4992 156 RKGFGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG 234 (404)
T ss_pred ccCCCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc
Confidence 1222222224667888999999999998 7999999999999998876 789999999999999999996431
Q ss_pred --CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH--HhhhcCCCccHHHHHHHHHhHHHHHH--HHHH
Q 009523 330 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGALNPNAAYLIIRGMKTLHL--RVQQ 403 (532)
Q Consensus 330 --~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~--~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~ 403 (532)
+.......-.||++ +.|.+||+ ...|+++.++.+.+.+.. ....+|+ +|+++..+...++.+.. -+++
T Consensus 235 k~fA~e~~gV~PDI~t--laK~LgGG--~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~e~ll~~ 308 (404)
T COG4992 235 KLFAYEHYGVEPDILT--LAKALGGG--FPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLEEGLLEN 308 (404)
T ss_pred hHHHHHHhCCCCCEEE--eeccccCC--ccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcchhHHHH
Confidence 22333444568887 89999976 467777777544444332 2233443 68888877777776532 2333
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~ 483 (532)
..+...++.+.|++.. ..||- -+..+|.|.|+.+++.... .+..++..+...++-+...
T Consensus 309 v~~~g~~~~~~L~~l~----~~~~~----------v~~vRG~GLmiGiel~~~~-~a~~~~~~~~~~gvL~~~a------ 367 (404)
T COG4992 309 VREKGEYLLQRLRELK----RRYPL----------VKEVRGRGLMIGIELKEPY-RARDIVRALREEGVLVLPA------ 367 (404)
T ss_pred HHHHHHHHHHHHHHHh----hcCCc----------eeeeecceeEEEEEecCcc-cHHHHHHHHHHCCeEEecC------
Confidence 3344445555555431 11221 1234678999999997532 4566777776555433221
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 531 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dli~dL~~AL~~ 531 (532)
.++.|||.-. .|+.++.++.|+++|+.
T Consensus 368 ---------------------~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 368 ---------------------GPNVIRFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred ---------------------CCCeEEecCCccCCHHHHHHHHHHHHHHHHH
Confidence 2457787654 47788888888888864
No 238
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.77 E-value=3.2e-16 Score=166.44 Aligned_cols=289 Identities=15% Similarity=0.173 Sum_probs=183.4
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHHhc-------
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVL------- 261 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all--------~~Gd~VIv~~~~y~~t~~~~~~~l------- 261 (532)
.+.++...+|+++|+++.+.+.+++++||++|+..+++... ...++||..+..|++........-
T Consensus 73 ~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~ 152 (397)
T TIGR03246 73 GYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQ 152 (397)
T ss_pred ccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 35678889999999999988899999999999999998652 123568888888877432111110
Q ss_pred --ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEECCCCCC------
Q 009523 262 --PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP------ 329 (532)
Q Consensus 262 --~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~-d---l~~I~~la~~~gi~lIvDet~a~~------ 329 (532)
......+..++.+|++++++++.+ ++++|++|.++++.|.+. | +++|.++|++||+++|+||++...
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~ 231 (397)
T TIGR03246 153 GFAPLPGGIKHAPYNDLAAAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGEL 231 (397)
T ss_pred CCCCCCCceEEeCCCCHHHHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccc
Confidence 011123456777899999999976 699999998777777554 2 889999999999999999996221
Q ss_pred CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHH
Q 009523 330 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 407 (532)
Q Consensus 330 ~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~ 407 (532)
+........+|++ +++|.++++ ...|++++++++++.+...........+|..+..++..++.+. ...++..++
T Consensus 232 ~a~~~~gv~pDi~--t~~K~lggG--~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 307 (397)
T TIGR03246 232 YAYMHYGVTPDIL--TSAKALGGG--FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQR 307 (397)
T ss_pred hhhhhcCCCCCEE--EeehhhhCC--cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 1111222345766 589999743 4678888898888777532211111235665655555555432 233444556
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
.+++.+.|++... .++.. ...+|.|.++.+++... ......|...|...++-+...
T Consensus 308 ~~~l~~~L~~l~~----~~~~~----------~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------- 364 (397)
T TIGR03246 308 HDLFVDGLEKINA----RYNVF----------SEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA--------- 364 (397)
T ss_pred HHHHHHHHHHHHh----cCCCe----------EeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec---------
Confidence 6666666665321 11110 11245678888888542 134566766665544332210
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
..+.||++..+ ++.++.++.|++++.+
T Consensus 365 ------------------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 365 ------------------GPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred ------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 13689997654 4455666666666653
No 239
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.77 E-value=1.1e-16 Score=170.90 Aligned_cols=287 Identities=15% Similarity=0.021 Sum_probs=186.9
Q ss_pred hhHHHHHHHHHhhhCCC----cEEE--eCCHHHHHHHHHHHhc----c----CC-----CEEEEcCCCCcchHHHHHHhc
Q 009523 201 PTTVVVEEKMSALEGAE----STVI--MASGMSASTVMLLALV----P----AG-----GHIVTTTDCYRKTRIFIETVL 261 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~----~~i~--~sSG~~Ai~~al~all----~----~G-----d~VIv~~~~y~~t~~~~~~~l 261 (532)
...++.++.+++++|.+ +.++ +++|++|+++++.+.. . .| .+|+++..+|.+.... +
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka----~ 155 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF----A 155 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH----H
Confidence 55666788999999975 3333 5788899999886542 1 12 3799999999886543 3
Q ss_pred ccCCcEEEEeCC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC------CCEEEEECCCCCC
Q 009523 262 PKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATP 329 (532)
Q Consensus 262 ~~~Gv~v~~vd~------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~------gi~lIvDet~a~~ 329 (532)
+..|++++.++. .|+++|++++++ +|.+|.+...+|.+|.+.|+++|+++|+++ |+++++|.+|+.+
T Consensus 156 ~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~-~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 156 RYFDVELREVPMDPGRYVIDPEQVVEAVDE-NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred HHcCceeEEEecCCCceeeCHHHHHHHHhh-CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 445666666543 278999999987 699999999999999999999999999999 9999999998842
Q ss_pred C--------cccccccCCcEEEECCcccc-CCCCCcEEEEEEeChH--HHHHHHHHhhhcC----------CCc--cHHH
Q 009523 330 L--------NQKALSLGADLVLHSATKFI-GGHNDVLAGSISGSGK--LVTQIRNLHHVLG----------GAL--NPNA 386 (532)
Q Consensus 330 ~--------~~~~l~~gaDivv~S~sK~l-gg~gd~~gG~lv~~~~--li~~l~~~~~~~G----------~~~--~~~~ 386 (532)
. ..+....++|.+..|.||++ ++.+ .|+++.+++ +.+.+.......+ +.. ....
T Consensus 235 ~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g---~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~ 311 (431)
T TIGR01788 235 IAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG---VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIA 311 (431)
T ss_pred HHHHhCCCchhhcCCCCceEEEECchhccCCCCC---cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHH
Confidence 1 11212357899999999988 6554 576665543 2222211000111 111 1223
Q ss_pred HHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHH
Q 009523 387 AYLIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATI 461 (532)
Q Consensus 387 a~l~l~~--l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~---~~~~~ 461 (532)
.|+.++. ...+...+++..+.++++.+.|++.|.++-+. |. | ..++++|.+++. .....
T Consensus 312 ~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~-~~----~-----------~~~iV~Fr~~~~~~~~~~~~ 375 (431)
T TIGR01788 312 QYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIIS-DG----S-----------GIPLVAFKLKDDADPGYTLY 375 (431)
T ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-CC----C-----------CceEEEEEeCCCCCCCcCHH
Confidence 4554433 33456667788889999999999988765442 21 1 246899998751 12334
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCC-CCeEEEEec----CCCHHHHHHHHHHHHhhC
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM-DNLVRFSFG----VEDFEDLKADVLQALHAI 532 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~-~~~IRlSvG----~ed~~dli~dL~~AL~~l 532 (532)
.+.+.|...++.++.= ..|. ++. .-.+|+++- .+..+++++||..++..+
T Consensus 376 ~l~~~L~~~G~~~~~~------~~p~---------------~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 376 DLSHRLRERGWIVPAY------TLPK---------------NAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHCCCcccCC------CCCC---------------ccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 5556665444332110 0111 111 236899884 356788888888887653
No 240
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=1.4e-17 Score=153.45 Aligned_cols=156 Identities=23% Similarity=0.271 Sum_probs=128.0
Q ss_pred HHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCC-----
Q 009523 203 TVVVEEKMSALE--GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD----- 275 (532)
Q Consensus 203 ~~~Le~~lA~l~--ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~d----- 275 (532)
.+++++.+++++ +.+.++++++|++|+.++++++.++|++|+++++.|++... ..+...|.++..++.++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 468999999999 77889999999999999999998889999999999998763 23456688888776431
Q ss_pred H--HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc----cccccCCcEEEECCccc
Q 009523 276 M--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGADLVLHSATKF 349 (532)
Q Consensus 276 l--e~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~----~~l~~gaDivv~S~sK~ 349 (532)
. +.+++.....+++++++++++|++|...|+++|.++|+++|+++|+|+++..+... .+...++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 24544443347999999999999999999999999999999999999997765433 35567899999999999
Q ss_pred cCCCCCcEEEEEEeC
Q 009523 350 IGGHNDVLAGSISGS 364 (532)
Q Consensus 350 lgg~gd~~gG~lv~~ 364 (532)
+++.+ +|+++.+
T Consensus 159 ~~~~~---~G~l~~~ 170 (170)
T cd01494 159 LGGEG---GGVVIVK 170 (170)
T ss_pred cCCCc---eEEEEeC
Confidence 99854 7888753
No 241
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.77 E-value=2.9e-16 Score=167.01 Aligned_cols=285 Identities=14% Similarity=0.198 Sum_probs=182.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHH-H--------Hhc
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFI-E--------TVL 261 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all--------~~Gd~VIv~~~~y~~t~~~~-~--------~~l 261 (532)
.++...+|+++|+++.+.+.+++++||++|+..+++... ...+.|+..+..|++..... . ..+
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 456678999999999887899999999999999988541 12356888888887743211 1 111
Q ss_pred ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-C----HHHHHHHHHhCCCEEEEECCCCCCCc-cc--
Q 009523 262 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D----VKLVSDLCHKKGAIVCIDGTFATPLN-QK-- 333 (532)
Q Consensus 262 ~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~-d----l~~I~~la~~~gi~lIvDet~a~~~~-~~-- 333 (532)
......+..++.+|++++++.+.+ ++++|++| |.||+|.+. + +++|.++|++||+++|+||++..... -.
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~-~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 237 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDD-HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF 237 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcC-CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch
Confidence 112234566788899999999976 69999998 666666554 3 88999999999999999999763211 11
Q ss_pred ---ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHH
Q 009523 334 ---ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 408 (532)
Q Consensus 334 ---~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a 408 (532)
......|+ .|++|.+++ | ...|++++++++++.+...........++..++.+...++.+. ...++..++.
T Consensus 238 ~~~~~~~~pdi--~s~sK~l~~-G-~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~ 313 (403)
T PRK05093 238 AYMHYGVTPDI--LTSAKALGG-G-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARR 313 (403)
T ss_pred hhhhcCCCCCE--EEecccccC-C-cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 11223454 578999994 3 5789999999988877643222222346666666666555432 2344555666
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
+.+.+.|++... .++.. ...++.|.+++++++.+. ....+|.+.+...++.+..+
T Consensus 314 ~~l~~~L~~~~~----~~~~~----------~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---------- 369 (403)
T PRK05093 314 QRFVDGLQKINQ----KYGVF----------SEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA---------- 369 (403)
T ss_pred HHHHHHHHHHHh----hCCCe----------EeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC----------
Confidence 777777766421 01100 011245778999986431 24556776665445443321
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
..+.|||++... +.++.++.|.++++
T Consensus 370 -----------------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~ 399 (403)
T PRK05093 370 -----------------GPDVLRFAPSLVIEEADIDEGLARFEKAVA 399 (403)
T ss_pred -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 136899987664 34445555555554
No 242
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.77 E-value=1e-16 Score=174.13 Aligned_cols=165 Identities=15% Similarity=0.234 Sum_probs=123.8
Q ss_pred hhHHHHHHHHHhhhCCCcE-EEeCCHHHHHHHH---HH-HhccCCC----EEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 201 PTTVVVEEKMSALEGAEST-VIMASGMSASTVM---LL-ALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~-i~~sSG~~Ai~~a---l~-all~~Gd----~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
....++++.+++++|.+.+ +..++|+.+.... +. .+.++|| +|+++++.|+.+... +...|++++.+
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v 188 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEI 188 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEe
Confidence 3456678999999998654 4446676443322 22 3456776 999999999876643 45578888887
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEECCCCCC-C-cccccccCCcEEE
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-L-NQKALSLGADLVL 343 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v-~dl~~I~~la~~~gi~lIvDet~a~~-~-~~~~l~~gaDivv 343 (532)
+. .|+++|++++++ +|++|++++|+ |+|.+ .|+++|+++||++|++++||+++... + ..++.++|+|+++
T Consensus 189 ~~~~~~~~D~e~L~~~i~~-~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~ 266 (481)
T PRK04366 189 PSNEDGLVDLEALKAAVGE-DTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVH 266 (481)
T ss_pred ecCCCCCcCHHHHHhhccc-CCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEE
Confidence 64 378999999987 69999999988 99987 58999999999999999999997532 1 2367788999999
Q ss_pred ECCccccCCC---CCcEEEEEEeChHHHHHH
Q 009523 344 HSATKFIGGH---NDVLAGSISGSGKLVTQI 371 (532)
Q Consensus 344 ~S~sK~lgg~---gd~~gG~lv~~~~li~~l 371 (532)
.|.||+++++ |..-+|+++.++++.+.+
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~l 297 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEELAPFL 297 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhhhHhhC
Confidence 9999998744 112367888877766654
No 243
>PLN03032 serine decarboxylase; Provisional
Probab=99.76 E-value=2.3e-16 Score=165.40 Aligned_cols=225 Identities=17% Similarity=0.143 Sum_probs=164.9
Q ss_pred hcccCCCCCCCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHh
Q 009523 187 EKRRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV 260 (532)
Q Consensus 187 ~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~--~--~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~ 260 (532)
+++...|.|++......+++++.+++++|.+ + .+++++|++|+..++.... .++++|+++...|.+.....
T Consensus 52 gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa--- 128 (374)
T PLN03032 52 GDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA--- 128 (374)
T ss_pred CCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHH---
Confidence 4455667888888888889999999999973 3 4888899999988887543 35679999999999876543
Q ss_pred cccCCcEEEEeC--C---CCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCC-----CEEEEECCCCC
Q 009523 261 LPKMGITATVID--P---ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-----AIVCIDGTFAT 328 (532)
Q Consensus 261 l~~~Gv~v~~vd--~---~dle~Le~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~g-----i~lIvDet~a~ 328 (532)
+.+|+.++.++ . .|+++|+++++++ +|.+|++...+|++|.+.|+++|+++|+++| +++++|.+++.
T Consensus 129 -~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg 207 (374)
T PLN03032 129 -RMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFG 207 (374)
T ss_pred -HHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchh
Confidence 33344444443 2 3899999999753 4778888889999999999999999999996 58999999865
Q ss_pred CC-ccc------ccccCCcEEEECCccccC-CCCCcEEEEEEeChHHHHHHHHHh--------hhcCCCc--cHHHHHHH
Q 009523 329 PL-NQK------ALSLGADLVLHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLH--------HVLGGAL--NPNAAYLI 390 (532)
Q Consensus 329 ~~-~~~------~l~~gaDivv~S~sK~lg-g~gd~~gG~lv~~~~li~~l~~~~--------~~~G~~~--~~~~a~l~ 390 (532)
+. ++. ....++|.++.|.||+++ |.+ .|+++.+++.++.+.... ...|+.. .....|..
T Consensus 208 ~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g---~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~ 284 (374)
T PLN03032 208 LMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMP---CGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYT 284 (374)
T ss_pred hhhhccCCCcccCCCcCCcEEEECcccccCCCcC---eEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHH
Confidence 42 210 123479999999999999 554 677777766665443211 1223322 24556655
Q ss_pred HH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 391 IR--GMKTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 391 l~--~l~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
++ |.+.+..++++..++++++.+.|++.
T Consensus 285 l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 285 LRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44 55667788889999999999999875
No 244
>PRK02769 histidine decarboxylase; Provisional
Probab=99.76 E-value=2.4e-16 Score=166.00 Aligned_cols=235 Identities=17% Similarity=0.144 Sum_probs=160.9
Q ss_pred ccCCCCCCCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhcc
Q 009523 189 RRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP 262 (532)
Q Consensus 189 ~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~--~--~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l~ 262 (532)
....+.|++......+++.+.+|+++|.+ + .+++++|++++..++... +.++++|++++.+|.+....++ .+.
T Consensus 53 p~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg 131 (380)
T PRK02769 53 PYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLR 131 (380)
T ss_pred ccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcC
Confidence 33455666666666777888899999974 3 477788889987776543 3578999999999999765542 232
Q ss_pred cCCcEEEEeC--CCCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCC---CEEEEECCCCCCCc----
Q 009523 263 KMGITATVID--PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDGTFATPLN---- 331 (532)
Q Consensus 263 ~~Gv~v~~vd--~~dle~Le~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~g---i~lIvDet~a~~~~---- 331 (532)
..+..+...+ ..|+++|+++++++ +|.+|++..++|++|.+.|+++|+++|+++| ++++||.+++.+..
T Consensus 132 ~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~ 211 (380)
T PRK02769 132 IKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN 211 (380)
T ss_pred CCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccC
Confidence 2222222221 13899999999763 3899999999999999999999999999998 69999999876432
Q ss_pred ----ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--------hhcCCC--ccHHHHHHHHHhH--H
Q 009523 332 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--------HVLGGA--LNPNAAYLIIRGM--K 395 (532)
Q Consensus 332 ----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--------~~~G~~--~~~~~a~l~l~~l--~ 395 (532)
++... ++|.++.|.||+++++. ..|+++.+++..+.+.... ...|+. ......|.+++.+ +
T Consensus 212 ~~~~~d~~~-~vDsis~s~HK~~~~P~--g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~ 288 (380)
T PRK02769 212 NPPPFSFAD-GIDSIAISGHKFIGSPM--PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSK 288 (380)
T ss_pred ccccCCccC-CCCEEEECCcccCCCCC--CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHH
Confidence 22223 89999999999998443 2677777776665542110 112222 1234455554433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCC
Q 009523 396 TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPG 428 (532)
Q Consensus 396 tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pg 428 (532)
.+..+.++..+.++++.+.|++. ++..+..|.
T Consensus 289 G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~ 320 (380)
T PRK02769 289 GLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN 320 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC
Confidence 45566677778889999988764 555454443
No 245
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.76 E-value=6.5e-16 Score=164.58 Aligned_cols=287 Identities=14% Similarity=0.148 Sum_probs=183.1
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHHhcc------
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLP------ 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all--------~~Gd~VIv~~~~y~~t~~~~~~~l~------ 262 (532)
.+.++...+|+++|+++.+.+.+++++||++|+..+++... ....+|+..+..|++.......+-.
T Consensus 77 ~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 156 (406)
T PRK12381 77 GYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQ 156 (406)
T ss_pred ccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccccc
Confidence 45677788999999999888889999999999999998642 1346788889989885422111100
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-----CHHHHHHHHHhCCCEEEEECCCCCC-C---
Q 009523 263 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP-L--- 330 (532)
Q Consensus 263 ---~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~-----dl~~I~~la~~~gi~lIvDet~a~~-~--- 330 (532)
..-..+..++..|++++++.+++ ++++|++| |.|++|-+. .+++|.++|++||+++|+||++... .
T Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~ 234 (406)
T PRK12381 157 DFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE 234 (406)
T ss_pred CCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc
Confidence 00012345566789999999976 69999996 677877643 2789999999999999999996321 1
Q ss_pred --cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHH
Q 009523 331 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 406 (532)
Q Consensus 331 --~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~ 406 (532)
.........|+ .|++|.++++ ...|++++++++++.+...........+|..+..+...++.+. ..+++..+
T Consensus 235 ~~~~~~~~v~pDi--~t~sK~l~gG--~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~ 310 (406)
T PRK12381 235 LYAYMHYGVTPDV--LTTAKALGGG--FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQ 310 (406)
T ss_pred hhhhHhhCCCCCE--EEehhhhhCC--CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 11112233565 4789999853 4678888999888877543222222346776666666555543 23344445
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCccccccc
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl~~~ 485 (532)
+.+++.+.|++... .++.. ...++.|.+++++++... .....+.+.+...++.+...
T Consensus 311 ~~~~l~~~L~~l~~----~~~~~----------~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-------- 368 (406)
T PRK12381 311 RHDWFVERLNTINA----RYGLF----------SEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-------- 368 (406)
T ss_pred HHHHHHHHHHHHHh----hCCCE----------EEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC--------
Confidence 56666666655310 01110 111356889999986431 24456666666555443211
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
.++.|||++.+ ++.++.++.|+++|+
T Consensus 369 -------------------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~ 398 (406)
T PRK12381 369 -------------------GPNVVRFAPALNISEEEITTGLDRFARACE 398 (406)
T ss_pred -------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHHH
Confidence 13579998876 334555566666654
No 246
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.76 E-value=9.3e-16 Score=163.03 Aligned_cols=258 Identities=19% Similarity=0.200 Sum_probs=169.1
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---------cC-CCEEEEcCCCCcch-HHHHHHhc-----
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PA-GGHIVTTTDCYRKT-RIFIETVL----- 261 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all---------~~-Gd~VIv~~~~y~~t-~~~~~~~l----- 261 (532)
+..+...+|+++|+++.|.+.+++++||++|+..+++.+. .+ .++|+..+..|++. ...+...-
T Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~ 155 (401)
T TIGR01885 76 FYNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSR 155 (401)
T ss_pred cCCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccc
Confidence 3567889999999999998889999999999999998642 13 35788888888863 33221100
Q ss_pred ccCC---cEEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC---
Q 009523 262 PKMG---ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 329 (532)
Q Consensus 262 ~~~G---v~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~--- 329 (532)
..++ ..+..++..|+++|+++++. .++.+|++|.+.+++|.+.| +++|.++|++||+++|+||++...
T Consensus 156 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~ 235 (401)
T TIGR01885 156 TNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRT 235 (401)
T ss_pred cccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 0122 23455677789999998852 25889999999999999987 899999999999999999996321
Q ss_pred ---CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHH
Q 009523 330 ---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQ 404 (532)
Q Consensus 330 ---~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~ 404 (532)
+.........|+++ ++|.+++++ ...|++++++++++.++..........+|..+..+...++.+.. ..++.
T Consensus 236 G~~~~~~~~~~~~di~~--~gK~l~~g~-~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~ 312 (401)
T TIGR01885 236 GKLLCVDHENVKPDIVL--LGKALSGGV-YPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENA 312 (401)
T ss_pred chhhHHhhcCCCCCEEE--eeccccCCC-CCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 01112234578776 569998643 24677888888888775422211112346666666666665542 22344
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHcCCCceee
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDALKIPYIAP 474 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~--~~~~~~l~~L~~~~i~v 474 (532)
.+..+++.+.|++.+. + +. ...+|.|.|+.++++.+. .....+.+.|...++.+
T Consensus 313 ~~~~~~~~~~L~~l~~------~-~~---------~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v 368 (401)
T TIGR01885 313 EKLGEIFRDQLKKLPK------P-II---------TEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLA 368 (401)
T ss_pred HHHHHHHHHHHHhccC------C-ce---------eEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEE
Confidence 4555666666665421 1 00 011346788888886431 24567777776555544
No 247
>PLN02624 ornithine-delta-aminotransferase
Probab=99.76 E-value=7.7e-16 Score=167.00 Aligned_cols=293 Identities=14% Similarity=0.194 Sum_probs=182.7
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc---------CCC-EEEEcCCCCcchHHHHHHhc---
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AGG-HIVTTTDCYRKTRIFIETVL--- 261 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~---------~Gd-~VIv~~~~y~~t~~~~~~~l--- 261 (532)
..++.++...+|+++|+++.+.+.+++++||++|+..+++.... ++. .|+.....|++........-
T Consensus 111 ~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~ 190 (474)
T PLN02624 111 SRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDN 190 (474)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCc
Confidence 33567888899999999999888899999999999999874322 133 57777777877421110110
Q ss_pred ---c---cCCcEEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC
Q 009523 262 ---P---KMGITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 262 ---~---~~Gv~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~ 329 (532)
. .....+.+++..|++.|++.++. .++++|++|+++|++|.+.| +++|.++|++||+++|+||++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~ 270 (474)
T PLN02624 191 EATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270 (474)
T ss_pred cccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 0 01112445677789999998853 36899999999999999988 999999999999999999997531
Q ss_pred ------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HH
Q 009523 330 ------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RV 401 (532)
Q Consensus 330 ------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~ 401 (532)
+..+......|+++ ++|.+++++ ...|++++++++++.+...........++..+..+...++.+.. ..
T Consensus 271 GrtG~~~a~~~~~i~pDiv~--lsK~lggG~-~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~ 347 (474)
T PLN02624 271 ARTGKMLACDWEEVRPDVVI--LGKALGGGV-IPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLA 347 (474)
T ss_pred CcCcchhhHHhcCCCCCEEE--ecccccCCC-CcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHH
Confidence 11111233467777 679998654 34677778888777664322111112466666666666665432 12
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCceeecCCC
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGG 478 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~---~~~~~~~l~~L~~~~i~vs~G~ 478 (532)
++..+..+.+.+.|++... .+|.. ....+|.|.++.++++.. ...+..+.+.|...++.+..+
T Consensus 348 ~~~~~~~~~l~~~L~~l~~----~~~~~---------i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~- 413 (474)
T PLN02624 348 ERSAKLGQELRDQLQKIQK----QFPKL---------IKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPT- 413 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH----hCCCc---------eEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecC-
Confidence 2223333444444443100 01100 001134678888888532 234566777766555544321
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
..+.|||+..+ ++.+++++.|+++|+
T Consensus 414 --------------------------~~~~lR~~p~l~~t~e~id~~l~~L~~~l~ 443 (474)
T PLN02624 414 --------------------------HDTIIRLAPPLSISEDELQECSKALSDVLE 443 (474)
T ss_pred --------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 14679998654 445555666655554
No 248
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.74 E-value=5.9e-16 Score=165.49 Aligned_cols=290 Identities=17% Similarity=0.151 Sum_probs=184.2
Q ss_pred CchhHHHH----HHHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccC-------------------------------CCE
Q 009523 199 GNPTTVVV----EEKMSALEGAEST-VIMASGMSASTVMLLALVPA-------------------------------GGH 242 (532)
Q Consensus 199 ~~p~~~~L----e~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~-------------------------------Gd~ 242 (532)
++...+.+ .++..+++|++.+ +-.-||+.|+..++.++++| ||+
T Consensus 89 g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~ 168 (493)
T PRK13580 89 GCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR 168 (493)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE
Confidence 34444444 4566678898764 56679999999999999987 899
Q ss_pred EEEcCCCCcchHHH------HHH--hcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHH
Q 009523 243 IVTTTDCYRKTRIF------IET--VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH 314 (532)
Q Consensus 243 VIv~~~~y~~t~~~------~~~--~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~ 314 (532)
|+..+..+++.... ... ....+|++.. -...|.+++++.+++ ++++|++...+|. +...|+++|.++|+
T Consensus 169 i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~~~~-~~plvii~g~S~~-~~~~dl~~i~eia~ 245 (493)
T PRK13580 169 LLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAALARE-FKPLILVAGYSAY-PRRVNFAKLREIAD 245 (493)
T ss_pred EEeecCCCCCeeecCcccchhhheeeeEecccCcc-cCccCHHHHHHHHhh-cCCEEEEeCcccc-CCCcCHHHHHHHHH
Confidence 99998888764211 000 0111222200 012389999999988 5677777788877 55889999999999
Q ss_pred hCCCEEEEECCCCCCCcc--------cccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-hhcCCCccHH
Q 009523 315 KKGAIVCIDGTFATPLNQ--------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPN 385 (532)
Q Consensus 315 ~~gi~lIvDet~a~~~~~--------~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~~~G~~~~~~ 385 (532)
++|+++++|++++.++.. .+. .++|+++.|+||++.|+. ||++++++++++.+.... ..+|+.+.+.
T Consensus 246 ~~gA~L~VD~AH~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P~i~gg~l~p~ 321 (493)
T PRK13580 246 EVGAVLMVDMAHFAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCPLVLGGPLPHV 321 (493)
T ss_pred HcCCEEEEECchhhceeccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCCcccCCCccHH
Confidence 999999999997665321 232 378999999999996553 799999999888885332 3456666665
Q ss_pred HHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 386 AAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 386 ~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
.+..+....+. ...+.++..+|++.|++.|.+... . +...+-+ ..++.+.+.+......
T Consensus 322 iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~-~-vv~ggTd---------------shIV~V~lg~~~~~g~ 384 (493)
T PRK13580 322 MAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGA-R-LVTGGTD---------------NHLVLIDVTSFGLTGR 384 (493)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCC-C-ccCCCCC---------------CCEEEEEeCCHHHHHH
Confidence 44443332222 134677888999999999987531 1 1111111 3488998864322333
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcC-CCCCeEEEEecC--------CCHHHHHHHHHHHHh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG-IMDNLVRFSFGV--------EDFEDLKADVLQALH 530 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~g-i~~~~IRlSvG~--------ed~~dli~dL~~AL~ 530 (532)
.+.+.|...+|-++. +..|... .| .....|||++.. ++.+.+.+.|.++++
T Consensus 385 ~a~~~L~e~GI~vn~------i~~Ptvp------------~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 385 QAESALLDAGIVTNR------NSIPSDP------------NGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred HHHHHHHHCCeEEcc------ccCCCCC------------CCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 444456555655442 1223210 01 124579998764 445555666655553
No 249
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=2.5e-15 Score=155.84 Aligned_cols=215 Identities=18% Similarity=0.224 Sum_probs=162.0
Q ss_pred hhHHHHHHHHHhhhCCC--cE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 201 PTTVVVEEKMSALEGAE--ST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
....++.+.|..+++.+ ++ ++.+||+.+++.++..+++|||+|++......+.+ +.+.++++|.+++.++.
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~ 115 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGE 115 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCC
Confidence 34566777888888875 44 45589999999999999999999999887766643 56788999999888864
Q ss_pred -CCHHHHHHhhcCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC-CCCcccccccCCcEEEECCcccc
Q 009523 274 -ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFI 350 (532)
Q Consensus 274 -~dle~Le~al~~~-~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a-~~~~~~~l~~gaDivv~S~sK~l 350 (532)
.|+++++++|+++ +.++|.+.+.-..||...|+++|+++|++||+++|||.+-+ .....++.++|+|+++.+..|.+
T Consensus 116 ~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l 195 (383)
T COG0075 116 AVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKAL 195 (383)
T ss_pred CCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhc
Confidence 3899999999842 57788887766789999999999999999999999999955 34567788899999999999999
Q ss_pred CCCCCcEEEEEEeChHHHHHHHHH------------hhhc---C---CCccHHHHHHHHHhHH-----HHHHHHHHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRNL------------HHVL---G---GALNPNAAYLIIRGMK-----TLHLRVQQQNST 407 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~~------------~~~~---G---~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~ 407 (532)
+++.+ .|++..+++.++.+... ...+ + .+++....+.+..+++ -++.|.++|..+
T Consensus 196 ~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~ 273 (383)
T COG0075 196 GAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRL 273 (383)
T ss_pred cCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 97763 57777776655544321 1111 2 2222233333333333 257788999999
Q ss_pred HHHHHHHHHhCC
Q 009523 408 ALRMAKILEAHP 419 (532)
Q Consensus 408 a~~la~~L~~~p 419 (532)
++.+.+.+++..
T Consensus 274 ~~a~r~~~~alG 285 (383)
T COG0075 274 AEALRAGLEALG 285 (383)
T ss_pred HHHHHHHHHHcC
Confidence 999999998763
No 250
>PLN00144 acetylornithine transaminase
Probab=99.73 E-value=1.9e-15 Score=159.65 Aligned_cols=283 Identities=16% Similarity=0.175 Sum_probs=178.2
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc---------C------CCEEEEcCCCCcchHHHHHHhc-
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------A------GGHIVTTTDCYRKTRIFIETVL- 261 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~---------~------Gd~VIv~~~~y~~t~~~~~~~l- 261 (532)
+.++...+|.++|+++.+.+.+++++||++|+..+++.... + ..+||.-...|++........-
T Consensus 54 ~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~ 133 (382)
T PLN00144 54 YHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTS 133 (382)
T ss_pred ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCC
Confidence 45777888999999887777889999999999999874421 0 2468888888888432211110
Q ss_pred --------ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC
Q 009523 262 --------PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 262 --------~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~ 329 (532)
...-..+.+++..|++++++.+..+++++|++|..+||.|...+ +++|.++|++||+++|+||++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~ 213 (382)
T PLN00144 134 KEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGL 213 (382)
T ss_pred CccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 00011245667778999999987557999999988899555432 789999999999999999996532
Q ss_pred C------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HH
Q 009523 330 L------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RV 401 (532)
Q Consensus 330 ~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~ 401 (532)
. ..+......| +.+++|.++++ ...|++++++++++.+...........+|..+.++...++.+.. ..
T Consensus 214 gr~g~~~~~~~~~~~PD--i~t~sK~l~~G--~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~ 289 (382)
T PLN00144 214 GRTGYLWAHEAYGVEPD--IMTLAKPLAGG--LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL 289 (382)
T ss_pred CccchHhhhhhcCCCCC--EEEecccccCC--cceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence 1 1112233467 45589999865 47899999998888775422222233467776666655554421 11
Q ss_pred HHHHHHHHHHHH----HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009523 402 QQQNSTALRMAK----ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 402 ~~~~~~a~~la~----~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G 477 (532)
++..+..+++.+ .+.++|.+..| +|.|.++|+++.. ....+...+...++.+..+
T Consensus 290 ~~~~~~g~~l~~~l~~~~~~~~~~~~v------------------rg~G~~~~l~l~~---~~~~~~~~~~~~Gv~i~~~ 348 (382)
T PLN00144 290 ASVAKKGEYLRELLRRKLGGNPHVKEV------------------RGVGLLVGIQLDV---PAGPLVDACRDSGLLVLTA 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceee------------------ecCceEEEEEecC---ccHHHHHHHHHCCeEEeec
Confidence 222222233333 33333332222 3568899999942 2345666655555444322
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
+ ..+.|||+.++ ++.++.++.|+++|.+
T Consensus 349 -------------------------~-~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 349 -------------------------G-KGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred -------------------------C-CCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 0 13689999987 3445555666666653
No 251
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=1.7e-15 Score=163.92 Aligned_cols=224 Identities=17% Similarity=0.105 Sum_probs=144.5
Q ss_pred CCCCCCC--CchhHHHHHH----HHHhhhCCC-cEEEe----CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHH--HH
Q 009523 192 SFEYGRY--GNPTTVVVEE----KMSALEGAE-STVIM----ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF--IE 258 (532)
Q Consensus 192 ~~~Y~R~--~~p~~~~Le~----~lA~l~ga~-~~i~~----sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~--~~ 258 (532)
+|.-.|| |+...+++|+ +..++++++ ..+.+ .||+.|+..++.++++|||+|+..+...++.... ..
T Consensus 65 G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~ 144 (475)
T PLN03226 65 GLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQT 144 (475)
T ss_pred CCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhh
Confidence 3444554 5567777765 455667764 34444 8999999999999999999999966544443211 11
Q ss_pred Hh--cccCCcEEE--EeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCC
Q 009523 259 TV--LPKMGITAT--VIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 259 ~~--l~~~Gv~v~--~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~ 328 (532)
.. +...+..+. .+..+ |+++|++++...++++|++ ..++ ++...|+++|.++|+++|+++++|+++..
T Consensus 145 ~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~ 222 (475)
T PLN03226 145 DGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWDYARMRKIADKVGALLMCDMAHIS 222 (475)
T ss_pred cccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccCHHHHHHHHHHcCCEEEEEchhhh
Confidence 11 111222211 22222 8999999887556887766 3333 78889999999999999999999999765
Q ss_pred CCc-----ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHH-----------H---HHHHH-hhhcCCCccHHHHH
Q 009523 329 PLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-----------T---QIRNL-HHVLGGALNPNAAY 388 (532)
Q Consensus 329 ~~~-----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li-----------~---~l~~~-~~~~G~~~~~~~a~ 388 (532)
++. ..+.. ++|+++.|+||++.|+. ||+++++++++ + .+... ...+.+.+++...+
T Consensus 223 Gli~~~~~~~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~ia 298 (475)
T PLN03226 223 GLVAAQEAASPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIA 298 (475)
T ss_pred CcccCCCCCCCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHH
Confidence 532 12333 69999999999996663 68888776543 1 11111 11233334555444
Q ss_pred HHHHhHHHH-----HHHHHHHHHHHHHHHHHHHhCCCce
Q 009523 389 LIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKVK 422 (532)
Q Consensus 389 l~l~~l~tl-----~~r~~~~~~~a~~la~~L~~~p~v~ 422 (532)
.+..+++.+ ....++..+|++++++.|.+ .++.
T Consensus 299 al~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~ 336 (475)
T PLN03226 299 ALAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYK 336 (475)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCE
Confidence 444455543 23567777999999999987 3443
No 252
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=4.5e-16 Score=149.54 Aligned_cols=289 Identities=14% Similarity=0.155 Sum_probs=193.1
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 197 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga-~~~i~~sSG~-~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
+|++|...++..+++.--+- .+.+.++-|+ +.|.++++..+.|| ++|+...|+|+-. .--+...+++|+.++.
T Consensus 65 ~~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY----~v~A~iNd~eVvkvpl 140 (375)
T KOG0633|consen 65 VYPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMY----VVDAAINDAEVVKVPL 140 (375)
T ss_pred ccCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeE----EEEeecCCceEEEecC
Confidence 44555566666666654332 4678889998 99999999999999 8999999999642 1224566888888764
Q ss_pred C-----CHHHHHHhhcCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhC-CCEEEEECCCCCCCc-ccc----cccCCcE
Q 009523 274 A-----DMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLN-QKA----LSLGADL 341 (532)
Q Consensus 274 ~-----dle~Le~al~~~-~tklV~lesP~NptG~v~dl~~I~~la~~~-gi~lIvDet~a~~~~-~~~----l~~gaDi 341 (532)
+ |.+++.+.++.. ++|++|+++|+||||.+...+.|.++.+.. |.++|+||+|..+.. ... .+...-+
T Consensus 141 ~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLi 220 (375)
T KOG0633|consen 141 NPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLI 220 (375)
T ss_pred CCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCcee
Confidence 3 788888887643 699999999999999999999999988764 789999999755432 111 1223347
Q ss_pred EEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccH-HHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 342 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP-NAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 342 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~-~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
++.++||.+|-.| ++.|+-+.+..+++.+......+.-.... ..+..++. .++.++.-.....+...+|...|.+.
T Consensus 221 vlqTlSKsfGLAG-iRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v 299 (375)
T KOG0633|consen 221 VLQTLSKSFGLAG-IRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEV 299 (375)
T ss_pred ehhhhhhhcCcce-eEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8899999998554 44566666778888877766655432222 22222222 34555555566667788888888887
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHH-HHHHcCCCceeecCCCcccccccCccccccCCCH
Q 009523 419 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIK-FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 496 (532)
Q Consensus 419 p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~-~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~ 496 (532)
|.+.. |||- ...+++-+++.++. ..+++ +.+.+...++-|.+-+.+- .
T Consensus 300 ~~~~~--~~gg--------------~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~-----~--------- 349 (375)
T KOG0633|consen 300 PFLND--YPGG--------------SDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEE-----G--------- 349 (375)
T ss_pred ccccC--CCCc--------------ccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCcc-----c---------
Confidence 76654 4431 13567888887542 23333 3444445555555543321 1
Q ss_pred HHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHH
Q 009523 497 SERLKYGIMDNLVRFSFGVE-DFEDLKADVLQA 528 (532)
Q Consensus 497 ~~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~A 528 (532)
-.|.+|+++|.+ +..-+++-|++.
T Consensus 350 --------c~G~lRitvGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 350 --------CKGYLRITVGTPEENTVLMKCLKQF 374 (375)
T ss_pred --------cceeEEEEcCCcccchHHHHHHHhh
Confidence 258999999974 455666666654
No 253
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.73 E-value=1.2e-17 Score=169.48 Aligned_cols=218 Identities=23% Similarity=0.298 Sum_probs=156.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
.++.+.+|++++++++|.+.++++.+|+.|+.++++++++|++.||+..+.|.-+.+.- ......|.++..++.
T Consensus 27 ~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~g-a~~~~~G~~~~~l~~~~~G~ 105 (290)
T PF01212_consen 27 EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETG-AIEELSGAKLIPLPSDDDGK 105 (290)
T ss_dssp SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTT-HHHHHTTCEEEEEBECTGTB
T ss_pred CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccc-hhhHhcCcEEEECCCcccCC
Confidence 47999999999999999999999999999999999999999999999988764322110 011235777777653
Q ss_pred CCHHHHHHhhcC-----CCeeEEEEeCCCCCC-CcccC---HHHHHHHHHhCCCEEEEECCCC------CCCcccccccC
Q 009523 274 ADMEGLEAALNN-----NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFA------TPLNQKALSLG 338 (532)
Q Consensus 274 ~dle~Le~al~~-----~~tklV~lesP~Npt-G~v~d---l~~I~~la~~~gi~lIvDet~a------~~~~~~~l~~g 338 (532)
.|+++|+++++. .++++|++|+|+|.. |.+++ +++|.++||++|+.+++|.+-. .......+..+
T Consensus 106 l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~ 185 (290)
T PF01212_consen 106 LTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAG 185 (290)
T ss_dssp B-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTT
T ss_pred CCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhh
Confidence 268999998865 358999999999863 77776 5678888999999999999921 11222334468
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCcc---HHHH---H--HHHHhHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAA---Y--LIIRGMKTLHLRVQQQNSTALR 410 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~---~~~a---~--l~l~~l~tl~~r~~~~~~~a~~ 410 (532)
+|++..|++|.++.++ +++++++++++++.+.++..+|+.+. ...+ | ..+++++....++.+..+++++
T Consensus 186 ~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~ 262 (290)
T PF01212_consen 186 ADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAKR 262 (290)
T ss_dssp SSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHC
T ss_pred CCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999774 88999999988776666666654332 2222 1 2223333334566677788999
Q ss_pred HHHHHHhCCC
Q 009523 411 MAKILEAHPK 420 (532)
Q Consensus 411 la~~L~~~p~ 420 (532)
|++.|+..+.
T Consensus 263 La~~l~~~~~ 272 (290)
T PF01212_consen 263 LAAGLEALGG 272 (290)
T ss_dssp HHHCHHEECE
T ss_pred HHHHHHHCCC
Confidence 9999887654
No 254
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.72 E-value=1.3e-15 Score=160.66 Aligned_cols=279 Identities=14% Similarity=0.033 Sum_probs=173.7
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeC-CHHHHHHHHHHHhccC-CCEEEEcCCCCcchHHHHHHhcccCCc-EEEEeCCC
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDPA 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~s-SG~~Ai~~al~all~~-Gd~VIv~~~~y~~t~~~~~~~l~~~Gv-~v~~vd~~ 274 (532)
...++.++.+++++|.+ ++++++ ||+.+++.++.+++++ ++.|++ ...|+.. +.....+++|+ +++.+...
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~--~~~~~~~~~g~~~v~~~~~~ 124 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK--WATDVVKQLKLEDPRVLEAD 124 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH--HHHHHHhhcCCCCceEeccC
Confidence 45677889999999962 466675 8999999999999875 445554 5567653 23223356688 77776532
Q ss_pred -----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCcc
Q 009523 275 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 348 (532)
Q Consensus 275 -----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK 348 (532)
|+++ ++. +++|.+.+..|.||.+.|+++|++ |++|++++||.+++.+. +++..+ +|+++.|.+|
T Consensus 125 ~g~~~d~~~----i~~--~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K 194 (378)
T PRK03080 125 YGSLPDLSA----VDF--DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQK 194 (378)
T ss_pred CCCCCCHhh----cCC--CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhh
Confidence 3443 332 567888899999999999999999 88999999999977543 344333 7999999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHh------------------h-h-cCCC---ccHHHHHHHHHhHHHH------HH
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLH------------------H-V-LGGA---LNPNAAYLIIRGMKTL------HL 399 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~------------------~-~-~G~~---~~~~~a~l~l~~l~tl------~~ 399 (532)
+++|+. ..|+++.+++.++++.... . . -+++ ++....+.+..+++.+ +.
T Consensus 195 ~l~~P~--G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~ 272 (378)
T PRK03080 195 VLGGEG--GHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDA 272 (378)
T ss_pred hCCCCC--ceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHH
Confidence 998743 2788999988877654310 0 0 0111 2222222223344333 33
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCC
Q 009523 400 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGG 478 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G~ 478 (532)
+.+++.+.++.+.++|++.+.+. +..+ .+. ...+.+++|.+++. ......++..+...++.+..|+
T Consensus 273 i~~r~~~l~~~l~~~l~~~~~~~-~~~~----~~~--------~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~ 339 (378)
T PRK03080 273 LIARTAANASVLYDWAEKTPWAT-PLVA----DPA--------TRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEP 339 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcc-cccC----Ccc--------ccCccEEEEEcCCchHHHHHHHHHHHHHcCCeecccc
Confidence 34455566777778888766432 1111 011 01245899988751 0011224444432345555543
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.. ..++.+|+|++..++++.++.+.++|+
T Consensus 340 ~~-----------------------~~~~~vRis~~~~~t~~di~~l~~al~ 368 (378)
T PRK03080 340 YR-----------------------DAPNGLRIWCGPTVEPADVEALTPWLD 368 (378)
T ss_pred cc-----------------------CCCCcEEEecCCCCCHHHHHHHHHHHH
Confidence 21 014689999998776666666666665
No 255
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.72 E-value=3.9e-15 Score=151.31 Aligned_cols=269 Identities=18% Similarity=0.209 Sum_probs=169.9
Q ss_pred HHHHHHHHHhhhC----C------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 203 TVVVEEKMSALEG----A------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 203 ~~~Le~~lA~l~g----a------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
...+++++|++++ . +..+++++++.|++++...|..|||..+++.|-|++.-. .+-=+-|++++.+.
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---dl~~rTgveivpv~ 199 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVEIVPVH 199 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc---cceeccCceEEEEE
Confidence 3456777777652 2 356777777799999999999999999999999998432 22224588888775
Q ss_pred CC-------CHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccCHHH---HHHHHHhCCCEEEEECCCCCCCccc----
Q 009523 273 PA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPLNQK---- 333 (532)
Q Consensus 273 ~~-------dle~Le~al~~-----~~tklV~lesP~NptG~v~dl~~---I~~la~~~gi~lIvDet~a~~~~~~---- 333 (532)
.. +.++||+++++ .++|.|++.+|+||.|.+.+-++ +.++|.++++.+|+||+|+..+...
T Consensus 200 c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~ 279 (471)
T KOG0256|consen 200 CSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFR 279 (471)
T ss_pred eecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCce
Confidence 32 57788877643 27999999999999999998665 5556779999999999977533211
Q ss_pred -cc--------ccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH------
Q 009523 334 -AL--------SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL------ 397 (532)
Q Consensus 334 -~l--------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl------ 397 (532)
.+ .....-++.|+||-+|-+| ...|+++... ++....+++. .+|. .++..++++..-|..-
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~GlpG-fRvGviYS~ne~VvsaA~kms-sf~~-vSs~tQ~~la~LLSD~~f~~~y 356 (471)
T KOG0256|consen 280 SVLEVRKDPHLDPDRVHIVYSLSKDFGLPG-FRVGVIYSNNEDVVSAATKMS-SFGL-VSSQTQYLLASLLSDEEFTREY 356 (471)
T ss_pred EHHHHhhccccCCCcEEEEEEeccccCCCc-eEEEEEEecChHHHHHHHHHh-hccC-CcHHHHHHHHHHhchHHHHHHH
Confidence 11 1122358899999999887 4678888755 5555555544 3444 3555555544433321
Q ss_pred -HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-----C----HHHHHHHHHHc
Q 009523 398 -HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-----D----LTATIKFIDAL 467 (532)
Q Consensus 398 -~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-----~----~~~~~~~l~~L 467 (532)
.+..++......++.+.|++ ...|-+++ +.|-++|+.+.. + .+.-+++++++
T Consensus 357 l~en~~Rl~~rh~~~~~gLk~------lgI~cl~s------------~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~v 418 (471)
T KOG0256|consen 357 LRENNKRLRIRHRYIVEGLKA------LGIPCLKS------------NAGLFCWVDLRKLLTSLTFEGELELWERILDNV 418 (471)
T ss_pred HHHHHHHHHHHHHHHHhhHHh------cCCceeec------------CCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhh
Confidence 11112222223344444443 33444443 356778888752 1 11223445444
Q ss_pred CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH
Q 009523 468 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE 519 (532)
Q Consensus 468 ~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~ 519 (532)
++-+|+|..+ |.+ .+|+.|+.|.-...+
T Consensus 419 ---klnlSpG~s~----------~C~-----------EpGWFRvcFAn~~~~ 446 (471)
T KOG0256|consen 419 ---KLNLSPGSSC----------HCH-----------EPGWFRVCFANMSEE 446 (471)
T ss_pred ---ccccCCCCcc----------eec-----------CCCeEEEEeccCCHH
Confidence 4456777542 221 368999999865443
No 256
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.71 E-value=1.4e-15 Score=159.10 Aligned_cols=276 Identities=12% Similarity=0.058 Sum_probs=173.8
Q ss_pred hhHHHHHHHHHhhhCC--C-cEEEeCC-HHHHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 201 PTTVVVEEKMSALEGA--E-STVIMAS-GMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--~-~~i~~sS-G~~Ai~~al~all~---~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...++.++.+++++|+ + +++++++ |++|+++++..+++ +||+|++. .|. .-+...+++.|+++++++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g--~~~---~~~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTG--AWS---AKAAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECC--HHH---HHHHHHHHhcCCCcEEEec
Confidence 5577889999999996 2 3566655 88999999999987 56666652 221 1112355777888887764
Q ss_pred C------C-HHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEEC
Q 009523 274 A------D-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 345 (532)
Q Consensus 274 ~------d-le~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S 345 (532)
+ + ++..+..+++ ++++|.+.+..|.||.+.+ ++++.+|++++||.+++.+ .+.+..+++ +++.|
T Consensus 119 ~~~g~~~~~~~~~~~~~~~-~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss 190 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAP-DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAG 190 (355)
T ss_pred ccccCCCCCCCHhhcCCCC-CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHhC--EEEee
Confidence 3 3 3333344555 7999999999999999843 4556699999999997654 345555544 56677
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHH-------hh--h---cCCCccHHHHHHHHHhHHHH------HHHHHHHHHH
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH--V---LGGALNPNAAYLIIRGMKTL------HLRVQQQNST 407 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~~--~---~G~~~~~~~a~l~l~~l~tl------~~r~~~~~~~ 407 (532)
.+|.+|++| .|+++.++++++++... .. . .-++++....+.+..+++.+ +.+.+++.+.
T Consensus 191 ~~K~lGP~G---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 191 AQKNLGPAG---VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccccCCCc---eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999887 68888888877654321 00 0 11234444444444455543 3344556677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
++++.+.|++.|++ |.... .+.. ..+.+++|.+++. .....+++.+...|+....|
T Consensus 268 ~~~l~~~l~~~~gl----~~~~~-~~~~--------rs~~vvsf~~~~~-~l~~~~~~~~~r~G~~~~~~---------- 323 (355)
T cd00611 268 AQLLYDTIDNSNGF----YRGPV-DKRA--------RSRMNVPFRLGKE-ELEKEFLKEAEAAGMIGLKG---------- 323 (355)
T ss_pred HHHHHHHHHhCccc----cccCC-CHHH--------cCceEEEEEcCCh-hhhHHHHHHHHHCCCcccCC----------
Confidence 78888888887653 21111 1110 1345799998752 11133333322223221111
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|. ..+.||+|++..++++.|+.|.++|++
T Consensus 324 ---~~------------~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 324 ---HR------------SVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred ---Cc------------ccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 10 136899999999888888999888875
No 257
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.71 E-value=5.6e-15 Score=158.14 Aligned_cols=285 Identities=16% Similarity=0.166 Sum_probs=177.8
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHh-------c------
Q 009523 198 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-------L------ 261 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga-~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~-------l------ 261 (532)
+.++...+|.++|+++.+. +.+++++||++|+..+++.. ....++||+.++.|++........ .
T Consensus 85 ~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 164 (423)
T TIGR00713 85 APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSP 164 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCC
Confidence 4567788999999998764 57888999999999988753 235689999999999853222110 0
Q ss_pred ---ccCCcEEEEeCCCCHHHHHHhhcC--CCeeEEEEe-CCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCC-
Q 009523 262 ---PKMGITATVIDPADMEGLEAALNN--NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL- 330 (532)
Q Consensus 262 ---~~~Gv~v~~vd~~dle~Le~al~~--~~tklV~le-sP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~- 330 (532)
...+..+..++..|+++|++++++ .++++|++| .++| +|.+.+ +++|.++|++||+++|+||++....
T Consensus 165 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~ 243 (423)
T TIGR00713 165 GVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV 243 (423)
T ss_pred CCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc
Confidence 001112344556689999998862 268999998 5566 788877 7899999999999999999974321
Q ss_pred ----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh---hhcCCCccHHHHHHHHHhHHHHHH--HH
Q 009523 331 ----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHL--RV 401 (532)
Q Consensus 331 ----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~~~~~~~a~l~l~~l~tl~~--r~ 401 (532)
.........|++ +++|.+++ | ..+|++++++++++.+.... .......++..+..++..++.+.. .+
T Consensus 244 g~~~~~~~~~~~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~ 319 (423)
T TIGR00713 244 ALGGAQEYFGVEPDLT--TLGKIIGG-G-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVY 319 (423)
T ss_pred CcchhHHHhCCCcchh--hhhhhhcC-C-CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHH
Confidence 111123345655 69999984 3 46899999999888875321 111123567777666666665432 23
Q ss_pred HHHHHHHHHHHHH----HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------------HHHHHHHHH
Q 009523 402 QQQNSTALRMAKI----LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFID 465 (532)
Q Consensus 402 ~~~~~~a~~la~~----L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------------~~~~~~~l~ 465 (532)
++..+..+++.+. +++++.+..+ ++.|+++.+++..+ ......+.+
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~v------------------~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (423)
T TIGR00713 320 TELDELAKRLAEGLSEVLEDTGIPHTV------------------NRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFH 381 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEE------------------EeeccEEEEEEecCCCCChhhhhcccHHHHHHHHH
Confidence 3333334444443 3344322222 23577888777521 122345665
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhhC
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHAI 532 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~~l 532 (532)
.+...++.+..++ .+.+||+... ++.+++++.|+++|+++
T Consensus 382 ~l~~~Gv~v~~~~---------------------------~~~~~l~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 382 EMLDKGVFLPPSQ---------------------------FEACFLSAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHCCeEEecCC---------------------------ccceeeECCCCHHHHHHHHHHHHHHHhhC
Confidence 5554454443211 1236777643 45667777777777653
No 258
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.71 E-value=1.2e-15 Score=154.12 Aligned_cols=283 Identities=18% Similarity=0.225 Sum_probs=196.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle 277 (532)
+....+||+.||+|.+.+.+++|+|..-|+...|..|.+ ||-+|......|.+...- .+..+++-..+..+|++
T Consensus 215 s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~G----Irns~v~K~IFrHND~~ 290 (570)
T KOG1360|consen 215 SKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQG----IRNSRVPKHIFRHNDLD 290 (570)
T ss_pred CchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHH----hhhcCCcceeeccCCHH
Confidence 455778999999999999999999999888888877744 788888777777664433 34456666667889999
Q ss_pred HHHHhhcCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---------cccccCCcEEEEC
Q 009523 278 GLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHS 345 (532)
Q Consensus 278 ~Le~al~~~---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~---------~~l~~gaDivv~S 345 (532)
+|+++++.. -+|+|-+|+.++..|.+.|+++|++++|+||++..+||+.+.++.- +..-...||+..+
T Consensus 291 hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGT 370 (570)
T KOG1360|consen 291 HLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGT 370 (570)
T ss_pred HHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccc
Confidence 999998642 4899999999999999999999999999999999999996654321 1122346999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHHH-----HHHHHHHHHHHHHHHHHHhC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH-----LRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl~-----~r~~~~~~~a~~la~~L~~~ 418 (532)
+.|.||- +||++.+...+++.+|.+.. .+...++|.....++.+++.+. ...+++++|..++.+.|.+.
T Consensus 371 LgKafGc----VGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~ 446 (570)
T KOG1360|consen 371 LGKAFGC----VGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL 446 (570)
T ss_pred hhhhccc----ccceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999994 58999999999999987643 4556677765554554444332 22346668888898888764
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCccccccCCCHH
Q 009523 419 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 419 p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
. .|-++ .| ..++-+.+. +.....+..+.| ...+|.+- -+-.|.. +
T Consensus 447 G------iPVi~-~p------------SHIiPv~vg-da~l~~~~sd~Li~~h~iYvQ------aINyPTV------~-- 492 (570)
T KOG1360|consen 447 G------IPVIP-NP------------SHIIPVRVG-DAALAKQASDILISKHNIYVQ------AINYPTV------A-- 492 (570)
T ss_pred C------CcccC-CC------------cceeeeecc-CHHHHHHHHHHHHHhcCeEEE------eccCCcc------c--
Confidence 2 23222 12 237777774 433333333322 11222221 1112321 0
Q ss_pred HHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 498 ERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.....+||.-...++.+..++|.++|.
T Consensus 493 ------rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 493 ------RGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred ------ccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 124578988887777777777777664
No 259
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=6.5e-15 Score=155.17 Aligned_cols=276 Identities=13% Similarity=0.093 Sum_probs=169.1
Q ss_pred hHHHHHHHHHhhhCC--C-cEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchH-HHHHHh-----cccCCc---E
Q 009523 202 TTVVVEEKMSALEGA--E-STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-----LPKMGI---T 267 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga--~-~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~-~~~~~~-----l~~~Gv---~ 267 (532)
....+++.+++.+.. + .+++++||++|+..+++... ..+++|++.+..|++.. ..+... ...++. .
T Consensus 67 ~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~ 146 (375)
T PRK04260 67 YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPH 146 (375)
T ss_pred cCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCC
Confidence 445566777765432 2 25788999999998887652 45678999888888732 222110 011111 1
Q ss_pred EEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc-c-----ccccc
Q 009523 268 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-Q-----KALSL 337 (532)
Q Consensus 268 v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~-~-----~~l~~ 337 (532)
+.+.+.+|++++++.+++ ++++|++|+++|++|.+.+ +++|.++|+++|+++|+||++..... . .....
T Consensus 147 ~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~ 225 (375)
T PRK04260 147 FSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI 225 (375)
T ss_pred eEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC
Confidence 233345689999998876 6899999999999998876 89999999999999999999743211 0 11123
Q ss_pred CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHH
Q 009523 338 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKIL 415 (532)
Q Consensus 338 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L 415 (532)
..|++ |++|.++++ ...|++++++++.+.+...........++..+..+...++.+. ..+++..+..+++.+.|
T Consensus 226 ~pdi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l 301 (375)
T PRK04260 226 EPDIF--TLAKGLANG--VPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQL 301 (375)
T ss_pred CCCEE--EecccccCC--cceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 45655 799999854 4688999998887776532211112235666666655564432 22334444444444444
Q ss_pred Hh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccc
Q 009523 416 EA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 416 ~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
.+ ++.+..+ ++.|.+++++++. ....|.+.+...++.+..+
T Consensus 302 ~~~~~~~~~~~~~------------------~~~g~~~~~~~~~---~~~~~~~~l~~~Gi~v~~~-------------- 346 (375)
T PRK04260 302 QKALQDKETVTTV------------------RGLGYMIGIETTA---DLSQLVEAARDKGLIVLTA-------------- 346 (375)
T ss_pred HHHHhhCCCeeEE------------------eccceEEEEEecC---cHHHHHHHHHhCCCEEecC--------------
Confidence 33 3222211 2357899999853 2345666665445433211
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 492 WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 492 ~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..+.|||+......++.++.+.+.|+
T Consensus 347 -------------~~~~lR~~~~~~~t~~~i~~~l~~l~ 372 (375)
T PRK04260 347 -------------GTNVIRLLPPLTLTKEEIEQGIAILS 372 (375)
T ss_pred -------------CCCEEEEcCCCccCHHHHHHHHHHHH
Confidence 13679999965444554555545444
No 260
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.69 E-value=6.4e-15 Score=169.31 Aligned_cols=165 Identities=15% Similarity=0.167 Sum_probs=134.5
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHH----HHHHHHHHHhccC-CC----EEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALEGAESTVIMASGM----SASTVMLLALVPA-GG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~~i~~sSG~----~Ai~~al~all~~-Gd----~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..++++.|++++|.+.+++..+.+ +|+++++.++.++ || +||++...|+++...+ ...|+++++++.
T Consensus 570 ~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a----~~~G~~vv~v~~ 645 (993)
T PLN02414 570 FEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASA----AMCGMKIVVVGT 645 (993)
T ss_pred HHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHH----HHCCCEEEEecc
Confidence 567899999999997777776665 7899999999876 88 8999999999876544 236899988875
Q ss_pred C-----CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC--cccccccCCcEEEE
Q 009523 274 A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLH 344 (532)
Q Consensus 274 ~-----dle~Le~al~~--~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~--~~~~l~~gaDivv~ 344 (532)
+ |+++|++++++ .+|++|++.+|+|.+|...|+++|+++||++|+++++|.++.... ...|.++|+|+++.
T Consensus 646 d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~ 725 (993)
T PLN02414 646 DAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHL 725 (993)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEe
Confidence 3 89999999984 268999999999999999999999999999999999999975433 35677899999999
Q ss_pred CCccccCCC---CCcEEEEEEeChHHHHHH
Q 009523 345 SATKFIGGH---NDVLAGSISGSGKLVTQI 371 (532)
Q Consensus 345 S~sK~lgg~---gd~~gG~lv~~~~li~~l 371 (532)
|.||+|+++ |+...|+++.++.+...+
T Consensus 726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~l 755 (993)
T PLN02414 726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 755 (993)
T ss_pred cCCccCCcCcccCCCCeeeEEEchhhcccC
Confidence 999976633 222367888877665443
No 261
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.69 E-value=8.8e-15 Score=152.76 Aligned_cols=285 Identities=11% Similarity=0.051 Sum_probs=184.7
Q ss_pred CCCCCCCCc---hhHHHHHHHHHhhhCC-C--cEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC
Q 009523 192 SFEYGRYGN---PTTVVVEEKMSALEGA-E--STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 192 ~~~Y~R~~~---p~~~~Le~~lA~l~ga-~--~~i~~s-SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
.+..+.... ...+++++.|.++++. + ++++++ ||+.|+++++..++.+||++++....+.+.+ +...++++
T Consensus 25 ~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~ 102 (349)
T TIGR01364 25 VMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKY 102 (349)
T ss_pred ccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHh
Confidence 344444444 5677889999999995 2 366664 4899999999999999999887766665543 34567778
Q ss_pred CcEEEEeC---------CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-Ccccc
Q 009523 265 GITATVID---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKA 334 (532)
Q Consensus 265 Gv~v~~vd---------~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~ 334 (532)
|+ +..+. ..|+++++ +++ ++++|.+.+-.+.||...+ ++++.++++++||.+++.+ .+.+.
T Consensus 103 g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~ 173 (349)
T TIGR01364 103 GV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDV 173 (349)
T ss_pred CC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCH
Confidence 87 54443 12444444 334 6899999888899999886 6777789999999997654 33444
Q ss_pred cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-------h-----hhcCCCccHHHHHHHHHhHHH------
Q 009523 335 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H-----HVLGGALNPNAAYLIIRGMKT------ 396 (532)
Q Consensus 335 l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~-----~~~G~~~~~~~a~l~l~~l~t------ 396 (532)
.++ |+++.|.+|++|++| .|+++.++++++++... . ...-++++....+.+..+++.
T Consensus 174 ~~~--d~~~~ssqK~lgP~G---lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG 248 (349)
T TIGR01364 174 SKF--GLIYAGAQKNIGPAG---LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGG 248 (349)
T ss_pred HHc--cEEEEecccccCCCc---eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 444 599999999999876 78888888887655321 1 011123444444444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009523 397 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 476 (532)
Q Consensus 397 l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~ 476 (532)
++.+.+++.+.++++.+.|++.+++. .+.. .|.. ..+.+++|.+++. .....++..+...|+++..
T Consensus 249 ~e~i~~r~~~l~~~l~~~l~~~~gl~---~~~~--~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~~ 314 (349)
T TIGR01364 249 VKAIEKRNQAKAQLLYDTIDNSNGFY---RNPV--DPRN--------RSRMNVVFTLGNE-ELEKRFLKEAEERGLVSLK 314 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCee---ccCC--CHHH--------cCCeEEEEecCCh-hHhHHHHHHHHHCCCcccC
Confidence 44455666777888888888876531 1111 1111 1346789998753 1224555554444543222
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|.. ..+.+|+|++.+++++.|+.|.++|++
T Consensus 315 ~~~-------------------------~~g~vRvS~~~~nt~edid~l~~al~~ 344 (349)
T TIGR01364 315 GHR-------------------------SVGGMRASIYNAMPLEGVQALVDFMKE 344 (349)
T ss_pred Ccc-------------------------ccCeeEEECcCCCCHHHHHHHHHHHHH
Confidence 210 136899999988777777777777764
No 262
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.69 E-value=4e-15 Score=150.33 Aligned_cols=258 Identities=21% Similarity=0.307 Sum_probs=165.1
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEc-CCCCcchHHHHH------Hh
Q 009523 191 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTT-TDCYRKTRIFIE------TV 260 (532)
Q Consensus 191 ~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~---~sSG~~Ai~~al~all~~Gd~VIv~-~~~y~~t~~~~~------~~ 260 (532)
.+|.| ++..++.|++..|+.+|++++++ +.||+.||.++|.++++|||+++.. ..-|-.....+- ..
T Consensus 47 TGYGY---~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GS 123 (403)
T PF06838_consen 47 TGYGY---DDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGS 123 (403)
T ss_dssp -TT-T---T-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSS
T ss_pred CcCCC---CCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCC
Confidence 35555 45678999999999999999987 5799999999999999999999864 445654333331 13
Q ss_pred cccCCcEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCC----CCCCcccCHHHHHHHHHh--CCCEEEEECCCCCC
Q 009523 261 LPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATP 329 (532)
Q Consensus 261 l~~~Gv~v~~vd~~-----dle~Le~al~~~~tklV~lesP~----NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~ 329 (532)
|+.+|+.+..++.. |.+.+++++++ +||+|++.--- -|+..+.+++++++++|+ .+++++|||+|+.+
T Consensus 124 L~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEF 202 (403)
T PF06838_consen 124 LKEFGIKYREVPLTEDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEF 202 (403)
T ss_dssp TGGGT-EEEE--B-TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTT
T ss_pred hHHhCceeEEEeecCCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCccee
Confidence 56789999988743 79999999997 79999996432 455666677888888776 47999999999988
Q ss_pred Cc-ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh------hhcCCCccHHHHHHHHHhHHHHHHHHH
Q 009523 330 LN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------HVLGGALNPNAAYLIIRGMKTLHLRVQ 402 (532)
Q Consensus 330 ~~-~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~------~~~G~~~~~~~a~l~l~~l~tl~~r~~ 402 (532)
.. ..|.+.|+|++..|+-|..||+--..||+++|+++++++..... ...|.+++. .-.+.+|+--.+.-+.
T Consensus 203 vE~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~--~R~~~QGlFlAP~vV~ 280 (403)
T PF06838_consen 203 VETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGT--NRLMFQGLFLAPHVVG 280 (403)
T ss_dssp TSSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTT--HHHHHHHHHHHHHHHH
T ss_pred ccccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcch--HHHHHhHHhhchHHHH
Confidence 64 67889999999999999999886667999999999999875422 233444432 2234455555555555
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 469 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~ 469 (532)
+..+.+...+..+++... .| .|... .+..+ -+-+++|. +.+...+|.+.++.
T Consensus 281 eAlKgaif~A~~fe~lG~--~v-~P~~~-~~R~D----------iIQai~l~-~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 281 EALKGAIFAAALFEKLGF--EV-SPKPD-DPRSD----------IIQAIELG-SPEKLIAFCQGIQA 332 (403)
T ss_dssp HHHHHHHHHHHHHHHTT---EE-ES-TT-S--SS----------S-EEEE-S-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC--cC-CCCCC-CCCCc----------eEEEEECC-CHHHHHHHHHHHHh
Confidence 556666677777777532 12 22211 12222 26688885 57888899888753
No 263
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.69 E-value=6.1e-15 Score=154.55 Aligned_cols=277 Identities=16% Similarity=0.095 Sum_probs=178.2
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCCcchHHHHHHh---------ccc
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETV---------LPK 263 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~G-d~VIv~~~~y~~t~~~~~~~---------l~~ 263 (532)
...+.++...+|+++|+++.+.+.+++++||++|+..+++.. ...| ++||+.+..|++.....-.. ...
T Consensus 60 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p 139 (364)
T PRK04013 60 GPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEP 139 (364)
T ss_pred cCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCC
Confidence 345778889999999999988788999999999999999855 2345 89999999998853221110 111
Q ss_pred CCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEECCCCCC-----Ccccc
Q 009523 264 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP-----LNQKA 334 (532)
Q Consensus 264 ~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~-d---l~~I~~la~~~gi~lIvDet~a~~-----~~~~~ 334 (532)
.-..+..++..|++.+++.+.+ ++++|++|......|... | +++|.++|++||+++|+||++... +....
T Consensus 140 ~~~~~~~~~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~ 218 (364)
T PRK04013 140 LVPGFKHIPFNDVEAAKEAITK-ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEH 218 (364)
T ss_pred CCCCcEEecCCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHh
Confidence 1123455666789999999976 799999998887666654 4 899999999999999999996532 11223
Q ss_pred cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 009523 335 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 335 l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~ 414 (532)
.....|+++ ++|.++++ ...|.++.+.++.. .........+|..+..++..++.+... ...++++++.+.
T Consensus 219 ~gv~PDiv~--~gK~lggG--~P~~a~~~~~~~~~----~~~~~T~~gnp~~~aaa~a~l~~i~~~--~l~~~~~~~l~~ 288 (364)
T PRK04013 219 YKVEPDIVT--MGKGIGNG--VPVSLTLTNFDVER----GKHGSTFGGNPLACKAVAVTLRILRRE--RLVEKAGEKFIE 288 (364)
T ss_pred cCCCCCEEE--ecccccCC--ceeEEEEecccccC----CCcCCCCCcCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 345578888 68999975 45566666655411 111111224677777777777665431 223333333111
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 494 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~ 494 (532)
+. .+.| ...+|.|.|+.+++... ...+.+.+...++-+...
T Consensus 289 l~-~~~v------------------~~vRG~Gl~~gve~~~~---~~~i~~~~~~~Gll~~~~----------------- 329 (364)
T PRK04013 289 IK-GERV------------------VTTRGRGLMIGIVLKKP---VGKYVEELQNRGYLVHTA----------------- 329 (364)
T ss_pred hc-cCcc------------------eeeeeCcEEEEEEeCCc---HHHHHHHHHhCCcEEeeC-----------------
Confidence 11 1211 12367899999999742 334555544334332211
Q ss_pred CHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009523 495 SQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 531 (532)
Q Consensus 495 ~~~~~~~~gi~~~~IRlSvG----~ed~~dli~dL~~AL~~ 531 (532)
..+.|||.-. .++.++.++.|+++|++
T Consensus 330 ----------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 330 ----------GQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred ----------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 1245666543 46777788888888764
No 264
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.68 E-value=7.4e-15 Score=156.68 Aligned_cols=212 Identities=15% Similarity=0.155 Sum_probs=153.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHH-HHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~sSG~-~Ai~~al~all~---~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+++++.++++.|.+ .++++++|+ .++.+++.++-. +||+||++...|.++.. .+...|++++++|.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k----Ai~~~G~~pv~Vd~ 180 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK----AISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH----HHHHcCCeEEEeee
Confidence 34677899999999987 689999999 688888777642 58999999999887653 44556788777773
Q ss_pred --------CCHHHHHHhhcCC--CeeEEEEeCCC-CCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc------cccc
Q 009523 274 --------ADMEGLEAALNNN--NVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS 336 (532)
Q Consensus 274 --------~dle~Le~al~~~--~tklV~lesP~-NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~------~~l~ 336 (532)
.|+++|+++|++. ++.++++.+|+ .+.|.+.|+++|+++|++||+++|+|++|+..... ....
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence 2899999999752 35666666665 55678899999999999999999999998854321 2233
Q ss_pred cC-CcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHH--HhHHHHHHHHHHHHHHHHHHH
Q 009523 337 LG-ADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMA 412 (532)
Q Consensus 337 ~g-aDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l--~~l~tl~~r~~~~~~~a~~la 412 (532)
.| +|++++|+||++..+++ ||+++. ++++++.++..............+|+.+ .+.+.+...+++..++++++.
T Consensus 261 ~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~ 338 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLK 338 (444)
T ss_pred ccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44 69999999999986653 677766 6677777765422111111223344332 355667777788888888888
Q ss_pred HHHHhC
Q 009523 413 KILEAH 418 (532)
Q Consensus 413 ~~L~~~ 418 (532)
+.|++.
T Consensus 339 ~~L~~l 344 (444)
T TIGR03531 339 ELLQKL 344 (444)
T ss_pred HHHHHH
Confidence 888764
No 265
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.68 E-value=4.8e-14 Score=151.32 Aligned_cols=287 Identities=14% Similarity=0.132 Sum_probs=183.0
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc----CC-CEEEEcCCCCcchHHHHHHh-----c-cc-
Q 009523 198 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETV-----L-PK- 263 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~----~G-d~VIv~~~~y~~t~~~~~~~-----l-~~- 263 (532)
..+|...+|.++|+++... +.+++++||++|+..+++.... .| .+||+....|++........ . +.
T Consensus 114 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 114 LLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 4578888899999998754 4578889999999999874321 23 57888888888843211111 0 11
Q ss_pred --CCcEEEEeCCCCHHHHHHhhc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC---
Q 009523 264 --MGITATVIDPADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 329 (532)
Q Consensus 264 --~Gv~v~~vd~~dle~Le~al~-----~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~--- 329 (532)
..-.+..++..|.+++++.++ ..++.+|++|......|.+.| ++++.++|++||+++|+||++...
T Consensus 194 ~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 194 MPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred CCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 112345567778888877774 136899999999888898888 999999999999999999996321
Q ss_pred ---CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCc--cHHHHHHHHHhHHHHHHH--HH
Q 009523 330 ---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLR--VQ 402 (532)
Q Consensus 330 ---~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--~~~~a~l~l~~l~tl~~r--~~ 402 (532)
+.......-.|+++ ++|.+|++- ...|.+++++++.+.+......++++. +|..+..++..++.+... .+
T Consensus 274 G~~~a~e~~gv~PDivt--~gK~lg~G~-~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 274 GKMFACEHEGVQPDILC--LAKALGGGV-MPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA 350 (442)
T ss_pred ccchhhhhcCCCCCeee--ehhhhcCCc-ccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 11222334578887 899998641 135666778888777642111234444 677777777777765421 22
Q ss_pred HHHHHHHHHHHHHHh----CC-CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009523 403 QQNSTALRMAKILEA----HP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 403 ~~~~~a~~la~~L~~----~p-~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G 477 (532)
+..+..+++.+.|++ +| .+..| +|.|.|+.+++..+ .....+.+.+...++-++..
T Consensus 351 ~~~~~G~~l~~~L~~l~~~~~~~i~~v------------------RG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~ 411 (442)
T TIGR03372 351 QAAIKGDFLLDGFQQLAAEYPDLIIEA------------------RGKGLLMAIEFRDN-EIGYAFAKELFQQNILVAGT 411 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEE------------------ecceEEEEEEeCCh-HHHHHHHHHHHHCCcEEeec
Confidence 233334444444443 22 12222 46788999999643 34456666665555443211
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+...+.|||+..+-.+++.++.+.++|++
T Consensus 412 -------------------------~~~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 412 -------------------------LNNAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred -------------------------CCCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 01236799988876666666666665543
No 266
>PLN02271 serine hydroxymethyltransferase
Probab=99.68 E-value=3.6e-14 Score=152.63 Aligned_cols=253 Identities=20% Similarity=0.170 Sum_probs=163.5
Q ss_pred CCCCCCC--CchhHHHHH----HHHHhhhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHH--
Q 009523 192 SFEYGRY--GNPTTVVVE----EKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-- 258 (532)
Q Consensus 192 ~~~Y~R~--~~p~~~~Le----~~lA~l~ga~~-----~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~-- 258 (532)
+|.-.|| |+...+++| ++..+++|++. .+-.-||+.|+.+++.++++|||+|+..+..|++......
T Consensus 179 G~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~ 258 (586)
T PLN02271 179 GMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYT 258 (586)
T ss_pred CCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhccccc
Confidence 3433454 455555553 55556778543 3555699999999999999999999999999998654221
Q ss_pred ---HhcccCCcEEEEeC--C------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 259 ---TVLPKMGITATVID--P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 259 ---~~l~~~Gv~v~~vd--~------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
......|+.+..++ . .|.++|++.+...++|+|++....+| ...|+++|.++|+++|+++++|.++.
T Consensus 259 ~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~ 336 (586)
T PLN02271 259 PGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHI 336 (586)
T ss_pred ccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECccc
Confidence 11233454443332 2 38999998544448999999777777 77899999999999999999999976
Q ss_pred CCCc-----ccccccCCcEEEECCccccCCCCCcEEEEEEeChH--------------------HHHHHHHHh--hhcCC
Q 009523 328 TPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------------------LVTQIRNLH--HVLGG 380 (532)
Q Consensus 328 ~~~~-----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--------------------li~~l~~~~--~~~G~ 380 (532)
.++. ..|.. ++|+++.|+||++.|+. ||+++.+++ +.+++.... ...|+
T Consensus 337 aGLIa~g~~~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgG 412 (586)
T PLN02271 337 SGLVAAKECVNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGG 412 (586)
T ss_pred ccccccCcCCCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccC
Confidence 5532 24554 59999999999998884 677776542 334443321 12233
Q ss_pred CccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 381 ALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
..+...+.++ .+++ ......++..+|++.|++.|.+. ++.-+ .-+..+ .++.+.+..
T Consensus 413 phn~~IAalA-valkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv-~ggTdn---------------HlvLvDl~~ 474 (586)
T PLN02271 413 PHNNHIAALA-IALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLV-TGGTDN---------------HLLLWDLTT 474 (586)
T ss_pred hhHHHHHHHH-HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEe-eCCCCc---------------ceeeecCcc
Confidence 2222222221 1222 33556778889999999999876 33222 223222 266676643
Q ss_pred ---CHHHHHHHHHHcC
Q 009523 456 ---DLTATIKFIDALK 468 (532)
Q Consensus 456 ---~~~~~~~~l~~L~ 468 (532)
+...+++.++...
T Consensus 475 ~g~~G~~ae~~Le~~~ 490 (586)
T PLN02271 475 LGLTGKNYEKVCEMCH 490 (586)
T ss_pred cCCCHHHHHHHHHHcC
Confidence 2355666666543
No 267
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.67 E-value=1.7e-14 Score=153.64 Aligned_cols=290 Identities=17% Similarity=0.127 Sum_probs=177.8
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhcc----CC-----CEEEEcCCCCcchHHHHHHh-------
Q 009523 198 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP----AG-----GHIVTTTDCYRKTRIFIETV------- 260 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga-~~~i~~sSG~~Ai~~al~all~----~G-----d~VIv~~~~y~~t~~~~~~~------- 260 (532)
+.++...+|.++|.++.+. +.+++++||++|+..+++.... .| .+|+.....|++........
T Consensus 79 ~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 79 FYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred cCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 4567777888999888753 6788899999999999874421 12 36888888888843211111
Q ss_pred --cccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC-----HHHHHHHHHhCCCEEEEECCCCCCCc--
Q 009523 261 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKKGAIVCIDGTFATPLN-- 331 (532)
Q Consensus 261 --l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d-----l~~I~~la~~~gi~lIvDet~a~~~~-- 331 (532)
.....-.+..++..|++.++++++++++.+|++|. .+++|.+.+ +++|.++|++||+++|+||++...-.
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP-~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 237 (408)
T PRK04612 159 EGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237 (408)
T ss_pred cCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 00011124456777999999999754677777754 555655543 78999999999999999999753211
Q ss_pred --ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHH
Q 009523 332 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 407 (532)
Q Consensus 332 --~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~~ 407 (532)
......+.+..+.+++|.++++ ...|++++++++.+.+...........+|..+.++...++.+.. ..++..+.
T Consensus 238 ~~~a~~~~~~~pdi~t~~K~l~~G--~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~ 315 (408)
T PRK04612 238 TLFAHWQEQVTPDIVTLAKALGGG--FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQ 315 (408)
T ss_pred chhhhhhcCCCCCEEEEcchhcCC--CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 1111234445556799999854 45677788888777665432222223467777777777766532 23333344
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
.+++.+.|++... .++.. ...+|.|.|+.+++..+ ...+..+.+.+...++.+...
T Consensus 316 g~~l~~~l~~l~~----~~~~i----------~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~--------- 372 (408)
T PRK04612 316 SAALRAGLEALNA----EFGVF----------AQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA--------- 372 (408)
T ss_pred HHHHHHHHHHHHh----hCCCe----------eeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC---------
Confidence 4555555543210 01110 11256788999998632 234566666666555433210
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 531 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dli~dL~~AL~~ 531 (532)
..+.||+... .++.+..++.|+++|.+
T Consensus 373 ------------------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 373 ------------------GPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred ------------------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 1356888754 35667777777777754
No 268
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.67 E-value=1.7e-15 Score=159.29 Aligned_cols=177 Identities=24% Similarity=0.365 Sum_probs=131.9
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.+.....+.++..|+++|++++++..+|+ .+|.+++++++++||.|++++++|.+.+.. +...|+.++++++.
T Consensus 63 ~p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~a----lil~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 63 DPEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNA----LILSGAIPVYIPPEDN 138 (417)
T ss_dssp TTBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHH----HHHHTEEEEEEEEEE-
T ss_pred CCccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHH----HHHcCCeEEEecCCcc
Confidence 45566888999999999999999999998 899999999999999999999999987643 34457777776531
Q ss_pred --------CH-----HHHHHhhcCC-C---eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc----
Q 009523 275 --------DM-----EGLEAALNNN-N---VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---- 333 (532)
Q Consensus 275 --------dl-----e~Le~al~~~-~---tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~---- 333 (532)
++ +.++++++++ . +++|++.+|+ ..|.+.|+++|+++||+++++|+|||+++..+.+.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 34 8898888653 2 3459998888 78999999999999999999999999988764433
Q ss_pred -ccccCCc-------EEEECCccccCCCCCcEEEEEEeChH---HHHHHHHHhhhcCCC
Q 009523 334 -ALSLGAD-------LVLHSATKFIGGHNDVLAGSISGSGK---LVTQIRNLHHVLGGA 381 (532)
Q Consensus 334 -~l~~gaD-------ivv~S~sK~lgg~gd~~gG~lv~~~~---li~~l~~~~~~~G~~ 381 (532)
....|+| +++.|+||.+++.. .+.++-.+.+ -.++++.....+.++
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TT 274 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTT 274 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-S
T ss_pred chhhccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCC
Confidence 3457999 99999999999876 4566655443 246666655555443
No 269
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.67 E-value=9.7e-15 Score=153.10 Aligned_cols=276 Identities=12% Similarity=0.029 Sum_probs=179.7
Q ss_pred hhHHHHHHHHHhhhCC-C--cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 201 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga-~--~~i~~-sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
...++.++.|+++++. + +++++ +||+.|+++++..++.+||++++......+.. +...++++|.. ..+...
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccc
Confidence 6678889999999996 2 34444 67779999999999999998877665555433 33566777765 333211
Q ss_pred ----CHHHHHH-hhcCCCeeEEEEeCCCCCCCccc-CHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCc
Q 009523 275 ----DMEGLEA-ALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 347 (532)
Q Consensus 275 ----dle~Le~-al~~~~tklV~lesP~NptG~v~-dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~s 347 (532)
+..++++ .+++ ++++|.+.+-.+.||.+. |+++| +|++++||.+++.+ .+.+..++ |+++.|.+
T Consensus 125 ~g~~~~~~~~~~~l~~-~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssq 195 (360)
T PRK05355 125 DGFTYIPPLDEWQLSD-DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQ 195 (360)
T ss_pred cCCCCCCChhhccCCC-CCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEecc
Confidence 2334444 6766 689999988889999998 77766 89999999997654 33444444 59999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHHH-h-----------hhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRNL-H-----------HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 409 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~~-~-----------~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a~ 409 (532)
|.+|++| .|+++.++++++++... . ...-++++....+.+..+++. ++.+.+++.+.++
T Consensus 196 K~lgP~G---lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 196 KNIGPAG---LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred ccccCCc---eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9999876 78888888877665431 1 011133444444444444443 3455566677888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
++.++|++.+.+..+ . .+.+ ..+.+++|.+++. .....+++.+...|+....|
T Consensus 273 ~l~~~l~~~~~~~~~-----~-~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~~~------------ 325 (360)
T PRK05355 273 LLYDAIDSSDFYRNP-----V-APED--------RSRMNVPFTLADE-ELDKKFLAEAKAAGLVGLKG------------ 325 (360)
T ss_pred HHHHHHHhCCCcccC-----C-Chhh--------cCCcEEEEEcCCh-HHHHHHHHHHHHCCCcccCC------------
Confidence 888888887621111 0 1111 1346899998764 23345555543333222111
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|. ..+.+|+|++..++.+.|+.|.++|++
T Consensus 326 -~~------------~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 326 -HR------------SVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred -CC------------ccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 00 147899999988877777777777764
No 270
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=1.9e-14 Score=146.44 Aligned_cols=253 Identities=21% Similarity=0.233 Sum_probs=169.8
Q ss_pred CCCCCCC--CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC
Q 009523 192 SFEYGRY--GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 192 ~~~Y~R~--~~p~~~~Le----~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
+|-.-|| |+..++.+| ++..+++|++.+ +--.||+.|+.+++.++++|||+|+-.+..+++....-.. ..-.
T Consensus 57 GyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~-v~~s 135 (413)
T COG0112 57 GYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSP-VNFS 135 (413)
T ss_pred CCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCC-CCcc
Confidence 4544554 455555554 566678999754 6678999999999999999999999999999885421100 0111
Q ss_pred C--cEEEEe--C----CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC-----CCCCc
Q 009523 265 G--ITATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLN 331 (532)
Q Consensus 265 G--v~v~~v--d----~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~-----a~~~~ 331 (532)
| .++... + ..|.|++++.+.+.++|+|++ -.+-.-+..|.+++.++|++.|++|++|-++ +.+..
T Consensus 136 G~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~--G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~ 213 (413)
T COG0112 136 GKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIA--GGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH 213 (413)
T ss_pred ceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEE--CccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccC
Confidence 2 222222 2 128999999998889999997 2234567889999999999999999999993 34566
Q ss_pred ccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHh--hhcCCCccHHHHHHH---HHhHH-HHHHHHHHH
Q 009523 332 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLH--HVLGGALNPNAAYLI---IRGMK-TLHLRVQQQ 404 (532)
Q Consensus 332 ~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~--~~~G~~~~~~~a~l~---l~~l~-tl~~r~~~~ 404 (532)
.+|+.+ +|+|+.|.||.|.|+ .||++.+++ ++.+++.+.. ...|+.+.-..+..+ ...++ .+....++.
T Consensus 214 p~P~~~-AdvVTtTTHKTlrGP---rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qV 289 (413)
T COG0112 214 PNPLPH-ADVVTTTTHKTLRGP---RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQV 289 (413)
T ss_pred CCCCCc-cceEeCCcccCCCCC---CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 789988 999999999999998 499999985 7888887632 122322111112111 11221 134555677
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---CHHHHHHHHHHcC
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALK 468 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---~~~~~~~~l~~L~ 468 (532)
.+|++.|++.|.+. +++ +..-+.++| ++-+.+.. +...++..+++..
T Consensus 290 v~NAkaLAe~l~~~-G~~-vvsGgTdnH---------------l~lVDl~~~~~~Gk~ae~~L~~~~ 339 (413)
T COG0112 290 VKNAKALAEALKER-GFK-VVSGGTDNH---------------LVLVDLRSKGLTGKKAEAALERAG 339 (413)
T ss_pred HHHHHHHHHHHHHc-CCe-EecCCccce---------------EEEEEcccCCCCHHHHHHHHHHcC
Confidence 79999999999885 332 222233332 56666652 2355666666654
No 271
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.66 E-value=7.3e-15 Score=143.39 Aligned_cols=211 Identities=18% Similarity=0.243 Sum_probs=153.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHH-
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME- 277 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle- 277 (532)
.......||.+||++.+.+++|+++++..|+..++.+++.|.|.|......|.+...-+ .++++++ .+|..|++
T Consensus 110 tq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~dv~~l~~ 184 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HVDVFDLEH 184 (417)
T ss_pred chHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cchhHHHHH
Confidence 44567889999999999999999999999999999999999999999888888766555 2444432 23333333
Q ss_pred HHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccc-------c--ccCCcEEEECCcc
Q 009523 278 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L--SLGADLVLHSATK 348 (532)
Q Consensus 278 ~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~-------l--~~gaDivv~S~sK 348 (532)
.+.++.+ .+.|+|.....-+..|.+.|+++|.+++++||.++++||++++++.-.. + .-.+|++..+++|
T Consensus 185 ~l~~a~k-~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgK 263 (417)
T KOG1359|consen 185 CLISACK-MRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGK 263 (417)
T ss_pred HHHHhhh-heEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhh
Confidence 2223333 3688999999999999999999999999999999999999887654211 1 1246899999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhC
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~ 418 (532)
.+||.+ ||+..++++++.-+++..+ .+...++|...-.+...+.. -...+++...+.+++.+.++..
T Consensus 264 AlGga~---GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 264 ALGGAS---GGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred hhcCCC---CCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999774 8999999999998876433 45566665432222222221 1223344556777777777653
No 272
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=2.7e-14 Score=151.62 Aligned_cols=235 Identities=12% Similarity=0.085 Sum_probs=150.8
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc------CC-CEEEEcCCCCcchH-HHHHHhcccC----
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------AG-GHIVTTTDCYRKTR-IFIETVLPKM---- 264 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~------~G-d~VIv~~~~y~~t~-~~~~~~l~~~---- 264 (532)
.+.++...+|.++|++..+.+.+++++||++|+..+++.... +| ++||+.+..|++.. ..+. .....
T Consensus 74 ~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~-~s~~~~~~~ 152 (395)
T PRK03715 74 AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMS-ASGKPGWDT 152 (395)
T ss_pred cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHh-hcCCccccc
Confidence 344666677777777765567899999999999999986641 23 57888888887742 2221 11100
Q ss_pred -----CcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC------
Q 009523 265 -----GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------ 329 (532)
Q Consensus 265 -----Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~------ 329 (532)
-..+..++..|++++++.+.+ ++++|++|..++..|.+.| +++|.++|++||+++|+||++...
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~ 231 (395)
T PRK03715 153 IFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTL 231 (395)
T ss_pred CCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcch
Confidence 011223345689999999976 6999999999888888877 999999999999999999996531
Q ss_pred CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCC--CccHHHHHHHHHhHHHHHH--HHHHHH
Q 009523 330 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQN 405 (532)
Q Consensus 330 ~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~--~~~~~~a~l~l~~l~tl~~--r~~~~~ 405 (532)
+.........|+++ ++|.++++ ...|.+++++++..... ...++ ..+|..+..++..++.+.. .+++..
T Consensus 232 ~a~~~~gv~PDi~t--~gK~lg~G--~p~~av~~~~~i~~~~~---~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~ 304 (395)
T PRK03715 232 FAYELSGIEPDIMT--LGKGIGGG--VPLAALLAKAEVAVFEA---GDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVR 304 (395)
T ss_pred hhHhhcCCCCceee--ehhhhhCC--cceEEEEEccccccccC---CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 11222334568765 68999974 34667777777642111 11122 2357777766667666542 334444
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
+...++.+.|++... .++ + ...+|.|.|+.+++..
T Consensus 305 ~~g~~l~~~L~~l~~----~~~-i----------~~vrG~Glm~~i~l~~ 339 (395)
T PRK03715 305 ARGEYLKEKLLELSE----ERG-L----------EGERGEGLLRALLLGK 339 (395)
T ss_pred HHHHHHHHHHHHHhh----cCC-c----------CeEEcceeEEEEEecC
Confidence 555555555554210 011 1 1124678899999964
No 273
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=1.1e-13 Score=148.41 Aligned_cols=289 Identities=13% Similarity=0.174 Sum_probs=180.1
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHhccc---
Q 009523 197 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLPK--- 263 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~l~~--- 263 (532)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++.... +| .+||.....|++...........
T Consensus 81 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~ 160 (423)
T PRK05964 81 GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGM 160 (423)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccc
Confidence 4667888889999999875 36788999999999999875421 23 57888888898843222111100
Q ss_pred --------CCcEEEEeCCCC-----HHHHHHhhcC--CCeeEEEEeC-CCCCCCcccC----HHHHHHHHHhCCCEEEEE
Q 009523 264 --------MGITATVIDPAD-----MEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 264 --------~Gv~v~~vd~~d-----le~Le~al~~--~~tklV~les-P~NptG~v~d----l~~I~~la~~~gi~lIvD 323 (532)
.++....++.+| ++++++.+.+ .++.+|++|. +.+..|...+ +++|.++|++||+++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 161 HALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred cccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 122222222334 7888888852 2688999988 5777787664 889999999999999999
Q ss_pred CCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH---h-hhcCCC--ccHHHHHHHH
Q 009523 324 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H-HVLGGA--LNPNAAYLII 391 (532)
Q Consensus 324 et~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~---~-~~~G~~--~~~~~a~l~l 391 (532)
|++... +........+|+++ ++|.++++. ...|++++++++.+.+... . ..++++ .+|..+..++
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~~--~~K~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~ 317 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIMC--LSKGLTGGY-LPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAAN 317 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCeee--eehhhhcCc-ccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHH
Confidence 996422 11122334567765 779997653 2467788899988877531 1 112332 4677766666
Q ss_pred HhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHc
Q 009523 392 RGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL 467 (532)
Q Consensus 392 ~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~--~~~~~~l~~L 467 (532)
..++.+. ..+++..+..+++.+.|++... +|.+. ..++.|.++.|++.++. .....+...|
T Consensus 318 a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~i~----------~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l 382 (423)
T PRK05964 318 ASLDLFEDEPVLERVAALSAGLAEGLEPFRD-----LPGVA----------DVRVLGAIGAVELDRPVLERDGPALRAFA 382 (423)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-----CCCeE----------EeecccEEEEEEeccCcchhHHHHHHHHH
Confidence 6666443 2344555566666666665311 22211 12456889999997532 1345666666
Q ss_pred CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 468 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 468 ~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
...++-++. ..+.|||+..+ ++++.+++.|+++|++
T Consensus 383 ~~~Gv~v~~----------------------------~~~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 383 LERGVLLRP----------------------------LGNTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred HHCCeEEEe----------------------------cCCEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 544433321 02468998775 4455556666666654
No 274
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.64 E-value=2.3e-14 Score=151.37 Aligned_cols=214 Identities=19% Similarity=0.226 Sum_probs=149.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe--C----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI--D---- 272 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v--d---- 272 (532)
++|+..+||+++++++|.+.++.++||+.|++.+....++|||.| +.+.|..+.... ....|....-+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ah---Ie~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYH---QEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHH---HHhCCeEEEeeecccccc
Confidence 688999999999999999999999999999888776778999977 667775554321 12334332222 1
Q ss_pred -----C----CCHHHHHHhhcCC---CeeEEEEeCCCCCC-Cccc---CHHHHHHHHHhCCCEEEEECCCCC--CC----
Q 009523 273 -----P----ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFAT--PL---- 330 (532)
Q Consensus 273 -----~----~dle~Le~al~~~---~tklV~lesP~Npt-G~v~---dl~~I~~la~~~gi~lIvDet~a~--~~---- 330 (532)
. .|+++|+++|++. ++++|.+++++|.. |.+. ++++|.++|++||++||.|.+... .+
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~ 223 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKE 223 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhc
Confidence 1 2799999999762 35688888999865 7885 478999999999999999999432 11
Q ss_pred -----ccccc-------ccCCcEEEECCccccCCCCCcEEEEEE-eChHHHHHHHHHhhhcCCC-----ccHHHHHHHHH
Q 009523 331 -----NQKAL-------SLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGA-----LNPNAAYLIIR 392 (532)
Q Consensus 331 -----~~~~l-------~~gaDivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~-----~~~~~a~l~l~ 392 (532)
...+. -..+|.++.|+.|..+.+ +||+++ ++++++++++.+...+++. ++.-....+..
T Consensus 224 re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~ 300 (450)
T TIGR02618 224 REQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAI 300 (450)
T ss_pred ccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHH
Confidence 11122 236899999999998877 478888 6778999988876554331 22212122233
Q ss_pred hHHHHHH--HHHHHHHHHHHHHHHHHhCCCc
Q 009523 393 GMKTLHL--RVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 393 ~l~tl~~--r~~~~~~~a~~la~~L~~~p~v 421 (532)
+++.... ..++...++++|++.|.+. +|
T Consensus 301 gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gv 330 (450)
T TIGR02618 301 GIREAVDYEYIEHRVKQVRYLGDKLKAA-GV 330 (450)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 4444322 2334446689999999886 44
No 275
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=1.3e-13 Score=148.69 Aligned_cols=292 Identities=15% Similarity=0.160 Sum_probs=182.4
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc----CC-CEEEEcCCCCcchHHHHHHhc---------
Q 009523 198 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETVL--------- 261 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~----~G-d~VIv~~~~y~~t~~~~~~~l--------- 261 (532)
+.+|...+|.++|+++... +.+++++||++|+..+++.... .| .+||.....|++........-
T Consensus 121 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 121 LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 4578888999999998753 4688889999999999874421 12 368888888888432111110
Q ss_pred ccCCcEEEEeCCCCHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC---
Q 009523 262 PKMGITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 329 (532)
Q Consensus 262 ~~~Gv~v~~vd~~dle~Le~al~~-----~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~--- 329 (532)
....-.+..++..|.+++++.++. .++.+|++|......|.+.| ++++.++|++||+++|+||++...
T Consensus 201 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 280 (459)
T PRK11522 201 MPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT 280 (459)
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc
Confidence 011112345566688888888752 35889999999988898887 899999999999999999996321
Q ss_pred ---CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCc--cHHHHHHHHHhHHHHHH--HHH
Q 009523 330 ---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHL--RVQ 402 (532)
Q Consensus 330 ---~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--~~~~a~l~l~~l~tl~~--r~~ 402 (532)
+.......-.|+++ ++|.+|++- ...|.+++++++.+.+......++++. +|..+..++..++.+.. .++
T Consensus 281 G~~~a~e~~gv~PDivt--~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~ 357 (459)
T PRK11522 281 GKMFACEHENVQPDILC--LAKALGGGV-MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPA 357 (459)
T ss_pred chhhhhhccCCCCCEEE--echhhhCCC-ccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHH
Confidence 11222333468875 899998641 135666677777766532111234444 77777777777776542 233
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
+..+..+++.+.|++.. -.+|.+ -...+|.|.|+.+++..+ +....+...+...++-+...
T Consensus 358 ~~~~~g~~l~~~L~~l~----~~~~~~---------i~~VrG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~----- 418 (459)
T PRK11522 358 QAEQKGDYLLDGFRQLA----REYPDL---------VQEARGKGMLMAIEFVDN-EIGYNFASEMFRQRVLVAGT----- 418 (459)
T ss_pred HHHHHHHHHHHHHHHHH----HhCCCc---------eeeEEeceeEEEEEecCc-hHHHHHHHHHHHCCeEEEec-----
Confidence 34444555555554321 012210 012256788999999743 34556666665555443211
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
+...+.||+...+ ++.+++++.|+++|++
T Consensus 419 --------------------~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 419 --------------------LNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred --------------------CCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 0124678887765 4556666677666653
No 276
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.64 E-value=2e-14 Score=150.87 Aligned_cols=284 Identities=12% Similarity=0.051 Sum_probs=170.1
Q ss_pred hhHHHHHHHHHhhhCC--C-cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCH
Q 009523 201 PTTVVVEEKMSALEGA--E-STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 276 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--~-~~i~~-sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dl 276 (532)
...++.++.++++++. + +++++ +||+.+++.++.+++.+ +.+++....|+.............+ ++..++....
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 5577789999999997 2 35554 55889999999998743 3444555666654433323322233 4555543323
Q ss_pred HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCccccCCCCC
Q 009523 277 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHND 355 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK~lgg~gd 355 (532)
+.++..+.+ ++++|.+.+..|.||.+.|+++| +|++|++++||.+++.+. +.+..+ +|++++|.+|++|++++
T Consensus 119 ~~~~~~~~~-~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~G 192 (361)
T TIGR01366 119 SAPEPQADP-GVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGG 192 (361)
T ss_pred CCCCCccCC-CCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCc
Confidence 344444555 69999999999999999999887 588999999999976543 233332 89999999999999862
Q ss_pred cEEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHH
Q 009523 356 VLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTA 408 (532)
Q Consensus 356 ~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a 408 (532)
.++++.++++++++..... ..-++++....+.+..+++. +..+.+++.+.+
T Consensus 193 --l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~ 270 (361)
T TIGR01366 193 --LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSS 270 (361)
T ss_pred --eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4556668877766542110 00112222222233333333 233456666778
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
+++.++|++.+.++.+ .+. +.+. ...-..++| +.+ .....+.+.|+..++.+..|..
T Consensus 271 ~~l~~~l~~~~~~~~~-~~~----~~~~------s~~v~~v~~--~~g-~~~~~v~~~L~~~gI~i~~~~~--------- 327 (361)
T TIGR01366 271 SRLYSWAQERPYATPF-VTD----PGKR------SQVVGTIDF--VDD-IDAATVAKILRANGIVDTEPYR--------- 327 (361)
T ss_pred HHHHHHHHhCCCcccC-CCC----hhhc------ccceEEEEC--CCc-cCHHHHHHHHHHCCCeeccCcc---------
Confidence 8888888887654221 111 1100 001134555 332 2334444555444554432200
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.. .++.+|+|+...++.+.++.|.++|+.
T Consensus 328 ------------~l--~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 328 ------------KL--GRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred ------------cc--CCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 01 246799999987777777777766653
No 277
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.63 E-value=7.8e-14 Score=134.97 Aligned_cols=219 Identities=16% Similarity=0.238 Sum_probs=164.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---- 274 (532)
..|....+-+.|++++|.+.+-++.+.-+|=.+++.+++++||.|++....|..++ ..+++.|.++..++..
T Consensus 59 ~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 59 TKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred cCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCCCCc
Confidence 35777777777999999987777766669999999999999999999999998876 3456778888888743
Q ss_pred ---CHHHHHHhh----cC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEE
Q 009523 275 ---DMEGLEAAL----NN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 344 (532)
Q Consensus 275 ---dle~Le~al----~~--~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~ 344 (532)
+++...+.| ++ ..+.+.++.+|....|.+.|.+.++++|+++|+++++..+|..+ .+.+..+.|+|+++.
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVg 214 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVG 214 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEe
Confidence 455544444 22 14789999999999999999999999999999999999998765 456777889999999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHh-h--------hcCCCccHHHHHHHHHhHHHHHHHHH---HHHHHHHHHH
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H--------VLGGALNPNAAYLIIRGMKTLHLRVQ---QQNSTALRMA 412 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~--------~~G~~~~~~~a~l~l~~l~tl~~r~~---~~~~~a~~la 412 (532)
|.||.++..+ ..|++..+.++.+.+-+.. . .+|.+.-......++..+.....|++ +-.++++++.
T Consensus 215 SGHKsmAAs~--PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv 292 (382)
T COG1103 215 SGHKSMAASA--PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFV 292 (382)
T ss_pred cCccchhccC--CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998766 5799988888887653322 1 34544322222223344444444444 3447788888
Q ss_pred HHHHhCCCceE
Q 009523 413 KILEAHPKVKR 423 (532)
Q Consensus 413 ~~L~~~p~v~~ 423 (532)
+.|++..++..
T Consensus 293 ~elEkigg~~q 303 (382)
T COG1103 293 AELEKIGGVKQ 303 (382)
T ss_pred HHHHHhhhHHH
Confidence 88888765543
No 278
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.62 E-value=2.4e-13 Score=139.35 Aligned_cols=272 Identities=17% Similarity=0.194 Sum_probs=170.8
Q ss_pred EEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----CHHHHHHhhcCC-------
Q 009523 219 TVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DMEGLEAALNNN------- 286 (532)
Q Consensus 219 ~i~~sSG-~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~----dle~Le~al~~~------- 286 (532)
-++.++| +.++..+++.++..||+|++...+|.+.. ...+..|+.+..|+.+ ++|.|++.+...
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL----~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~ 201 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL----QSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKK 201 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH----HhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccC
Confidence 4555555 59999999999999999999999998865 3456678888888754 788888877532
Q ss_pred -CeeEEEE-eCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCC----Cc---------c-----------ccc--
Q 009523 287 -NVSLFFT-ESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATP----LN---------Q-----------KAL-- 335 (532)
Q Consensus 287 -~tklV~l-esP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~----~~---------~-----------~~l-- 335 (532)
+++++|. .+-+||||....+ ++|.+||++|++++|+|+.|.-. +. + ..+
T Consensus 202 ~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflsl 281 (472)
T KOG0634|consen 202 PKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSL 281 (472)
T ss_pred CCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccc
Confidence 3556664 3345999999985 48999999999999999995321 00 0 011
Q ss_pred -ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHH---------HHHHHHhHHHHHHHHHHHH
Q 009523 336 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA---------AYLIIRGMKTLHLRVQQQN 405 (532)
Q Consensus 336 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~---------a~l~l~~l~tl~~r~~~~~ 405 (532)
..|..|-..||||.++++ ++.||+.+++.+++++-.........++.+. .|....-++++........
T Consensus 282 DtdGrVIr~dSFSKiiaPG--lRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt 359 (472)
T KOG0634|consen 282 DTDGRVIRNDSFSKIIAPG--LRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYT 359 (472)
T ss_pred cccccEEeccchhhhhcCc--ceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 125557788999999976 4789999999888876543332221122222 2222111233322222333
Q ss_pred HHHHHHHHHHHhC-CCc-eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc-------CCHHHHHHHHHH-cCCCceeec
Q 009523 406 STALRMAKILEAH-PKV-KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-------GDLTATIKFIDA-LKIPYIAPS 475 (532)
Q Consensus 406 ~~a~~la~~L~~~-p~v-~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~-------g~~~~~~~~l~~-L~~~~i~vs 475 (532)
..+..+...|.+. |.- -.+..|. .|.++||+++ ....+.+.++.. +...++-+-
T Consensus 360 ~Rrn~~l~Al~kylp~~~~~~~~P~----------------aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v 423 (472)
T KOG0634|consen 360 ERRNALLSALDKYLPKSVCEYHPPK----------------AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLV 423 (472)
T ss_pred HHHHHHHHHHHHhCCCCeeEEecCC----------------cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEe
Confidence 4444455555443 443 3333332 5778899996 333444444432 334466666
Q ss_pred CCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Q 009523 476 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQA 528 (532)
Q Consensus 476 ~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~A 528 (532)
.|..+... |... -..-++|+|+...+.+++.+.+++-
T Consensus 424 ~G~~F~v~--p~~s--------------~~kiffRls~a~a~~e~l~~g~~rf 460 (472)
T KOG0634|consen 424 CGSWFMVD--PESS--------------WSKIFFRLSIAFAEPEKLDEGIERF 460 (472)
T ss_pred cCceeEEc--CccC--------------CCcceEEEEeecCCHHHHHHHHHHH
Confidence 77655432 2210 0123899999998888777766643
No 279
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.62 E-value=2e-13 Score=146.08 Aligned_cols=292 Identities=15% Similarity=0.166 Sum_probs=173.5
Q ss_pred CCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc-----ccC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKM 264 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l-----~~~ 264 (532)
+..+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+|+.....|+|........- .+.
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 156 (421)
T PRK09792 77 YQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKI 156 (421)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCccccc
Confidence 4445778888899999998642 578899999999999987542 223578888888888432111110 011
Q ss_pred C-----cEEEEeCC----------CCHHHHHHhhc----CCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEE
Q 009523 265 G-----ITATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVC 321 (532)
Q Consensus 265 G-----v~v~~vd~----------~dle~Le~al~----~~~tklV~lesP~NptG~v~-d---l~~I~~la~~~gi~lI 321 (532)
+ ..+..++. .+++.+++.++ ..++++|++|...+++|... | +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 157 GFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 1 01222222 13578888775 23689999999999999765 6 8899999999999999
Q ss_pred EECCCCCC-C-----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH
Q 009523 322 IDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 395 (532)
Q Consensus 322 vDet~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~ 395 (532)
+||++... . .........|++ +++|.++++ ...|++++++++++.+...........+|..+..++..++
T Consensus 237 ~DEv~tg~gr~G~~~a~~~~~~~pDi~--t~gK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 312 (421)
T PRK09792 237 ADEVQSGFARTGKLFAMDHYADKPDLM--TMAKSLAGG--MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN 312 (421)
T ss_pred EeccccCCCCCCchhHHHhcCCCCcEE--EeehhhcCC--CceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99996532 1 112222346754 589999864 4678889998888776532221122345666665555555
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH------HHHHHHHHHc
Q 009523 396 TLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDAL 467 (532)
Q Consensus 396 tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~------~~~~~~l~~L 467 (532)
.+.. .+++..+..+++.+.|++.. -.+|.. .+.+|.|.+++++++++. .....+...+
T Consensus 313 ~l~~~~~~~~~~~~g~~l~~~l~~l~----~~~p~v----------~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~ 378 (421)
T PRK09792 313 IIDKESLCERANQLGQRLKNTLIDAK----ESVPAI----------AAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA 378 (421)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHH----HhCCCc----------ceecccceEEEEEecCCccCCcchHHHHHHHHHH
Confidence 4422 12222233333333333210 011211 122567899999997431 2345566555
Q ss_pred CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Q 009523 468 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQAL 529 (532)
Q Consensus 468 ~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL 529 (532)
...++.+.. .|...+.|||...+ ++.+..++.|.++|
T Consensus 379 ~~~Gv~i~~-------------------------~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l 419 (421)
T PRK09792 379 LAQGLLLLT-------------------------CGAYGNVIRFLYPLTIPDAQFDAAMKILQDAL 419 (421)
T ss_pred HHCCcEEee-------------------------cCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 544543311 01124789999776 34445555555555
No 280
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.61 E-value=1.4e-13 Score=147.54 Aligned_cols=287 Identities=17% Similarity=0.182 Sum_probs=180.4
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHh-------cc-c--C
Q 009523 198 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV-------LP-K--M 264 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~-ga~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~-------l~-~--~ 264 (532)
+.++...+|.++|+++. +.+.+++++||++|+..+++.... .+++||..++.|++........ .. . .
T Consensus 87 ~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 87 APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 45677788999999876 346788999999999999986543 3678999999999854221111 00 0 0
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC---
Q 009523 265 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 329 (532)
Q Consensus 265 Gv------~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~--- 329 (532)
+. ....++..|++++++.++. .++++|++|.....+|.+.+ +++|.++|++||+++|+||++...
T Consensus 167 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g 246 (426)
T PRK00062 167 GVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA 246 (426)
T ss_pred CCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC
Confidence 11 1233455689999988852 36899999977777899988 899999999999999999996532
Q ss_pred --CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hc--CCCccHHHHHHHHHhHHHHHH--HHH
Q 009523 330 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VL--GGALNPNAAYLIIRGMKTLHL--RVQ 402 (532)
Q Consensus 330 --~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~--G~~~~~~~a~l~l~~l~tl~~--r~~ 402 (532)
..........|+ .+++|.++++ ...|++++++++++.++.... .. ....+|..+..++..++.+.. ..+
T Consensus 247 ~~~~~~~~~~~pDi--~~~gK~l~~G--~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~ 322 (426)
T PRK00062 247 LGGAQGYYGVTPDL--TTLGKIIGGG--LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYE 322 (426)
T ss_pred CccHHHHhCCCcch--HhhhhHhhCC--CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHH
Confidence 111112223565 4689999853 346777888888887753211 11 123567777766666665543 334
Q ss_pred HHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------------HHHHHHHHHH
Q 009523 403 QQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFIDA 466 (532)
Q Consensus 403 ~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------------~~~~~~~l~~ 466 (532)
+..+..+++.+.|++ ++.+..+ ++.|.|+.+++..+ ...+..+.+.
T Consensus 323 ~~~~~~~~~~~~l~~~~~~~~~~~~v------------------rg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~ 384 (426)
T PRK00062 323 ELEALTKRLAEGLKEAAKKAGIPLTV------------------NRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHA 384 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEE------------------EEecceEEEEEecCCCcchhhhccccHHHHHHHHHH
Confidence 444555555555543 2322111 34688999988531 1234566666
Q ss_pred cCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 467 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 467 L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+...++-+...+. + .-.+.+.+..++.+++++.|++++.+
T Consensus 385 l~~~Gv~v~~~~~------~-------------------~~~~~~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 385 MLDEGVYLAPSQF------E-------------------AGFVSAAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred HHHCCeEeecCCc------C-------------------ceeeeccCCHHHHHHHHHHHHHHHHh
Confidence 6555544432110 0 01123344456677778888777764
No 281
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=3.7e-13 Score=144.67 Aligned_cols=293 Identities=15% Similarity=0.140 Sum_probs=174.5
Q ss_pred CCCCchhHHHHHHHHHhhh-CC-CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHH-HHHhc-----c-cC
Q 009523 196 GRYGNPTTVVVEEKMSALE-GA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IETVL-----P-KM 264 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~-ga-~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~-~~~~l-----~-~~ 264 (532)
+.+.++...+|.++|+++. +. +.+++++||++|+..+++... ....+|+..+..|++.... +.... . .+
T Consensus 81 ~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 160 (433)
T PRK08117 81 GVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYY 160 (433)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccC
Confidence 3457788899999999998 33 456666899999999998432 2235788888888874321 10000 0 00
Q ss_pred C---cEEEEeCC-----------------CCHHHHHHhhc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009523 265 G---ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 316 (532)
Q Consensus 265 G---v~v~~vd~-----------------~dle~Le~al~----~~~tklV~lesP~NptG~v~d----l~~I~~la~~~ 316 (532)
+ ..+.+++. .+++++++.++ .+++.+|++|......|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~ 240 (433)
T PRK08117 161 QPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH 240 (433)
T ss_pred CCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc
Confidence 0 01122221 14566776654 236899999999988899988 99999999999
Q ss_pred CCEEEEECCCCCCCc------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHH
Q 009523 317 GAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 390 (532)
Q Consensus 317 gi~lIvDet~a~~~~------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~ 390 (532)
|+++|+||++...-. ......-.|+ .+++|.++++ ...|++++++++++.+...........+|..+..+
T Consensus 241 g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G--~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa 316 (433)
T PRK08117 241 GILLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIASG--LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAA 316 (433)
T ss_pred CCEEEEecchhccCccccchhHhhcCCCCCE--eehhhhccCC--CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHH
Confidence 999999999764211 1112223455 5799999853 46788889988887764322111123467777777
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----HHHHHHH
Q 009523 391 IRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKF 463 (532)
Q Consensus 391 l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-----~~~~~~~ 463 (532)
+..++.+.. .+++..+..+++.+.|++... .+|.. ...+|.|.++++++..+ ......+
T Consensus 317 ~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~----------~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~ 382 (433)
T PRK08117 317 LATLEVIKEEKLLDNANEMGAYALERLEVLKE----KHPVI----------GDVRGIGLMIGIEIVDPDGEPDGDAVEKI 382 (433)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----cCCce----------eeeecCCcEEEEEEecCCCCcchHHHHHH
Confidence 777765532 223333444445554543210 12211 11256788999998531 1234455
Q ss_pred HHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 464 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 464 l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
.+.+...|+.+... |...+.|||+..+ ++.++.++.|.+++++
T Consensus 383 ~~~l~~~Gv~~~~~-------------------------g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 383 LDKCLEKGLLFYLC-------------------------GNAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred HHHHHHCCCEEeec-------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 55554444322110 1124689998654 4556666666666653
No 282
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=3.5e-13 Score=145.03 Aligned_cols=284 Identities=14% Similarity=0.159 Sum_probs=172.4
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchH-HHHHHh-cc-----cCC-
Q 009523 198 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-LP-----KMG- 265 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~-~~~~~~-l~-----~~G- 265 (532)
+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+|+.-...|++.. ..+... .. .++
T Consensus 81 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 160 (443)
T PRK08360 81 GFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE 160 (443)
T ss_pred cCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC
Confidence 3467778899999998764 468888999999999987542 23357888777887742 211100 00 011
Q ss_pred -cEEEEeCC-----------------CCHHHHHHhhc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCE
Q 009523 266 -ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 319 (532)
Q Consensus 266 -v~v~~vd~-----------------~dle~Le~al~----~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~ 319 (532)
..+.+++. .+++.+++.++ ..++++|++|...||+|.+.+ +++|.++|++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~l 240 (443)
T PRK08360 161 LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGIL 240 (443)
T ss_pred CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 11222221 12344556663 236999999987899998876 78999999999999
Q ss_pred EEEECCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009523 320 VCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 393 (532)
Q Consensus 320 lIvDet~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~ 393 (532)
+|+||++... .. ........|++ +++|.++++ ...|++++++++++.+...........++..+..++..
T Consensus 241 lI~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~ 316 (443)
T PRK08360 241 LVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGGG--LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAV 316 (443)
T ss_pred EEEeccccCCCcCccchhhhhcCCCCCEE--EecccccCC--ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHH
Confidence 9999996532 11 11122345776 479999953 56788999998888775432222233456666666666
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHH
Q 009523 394 MKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTAT 460 (532)
Q Consensus 394 l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------~~~~ 460 (532)
++.+.. ..++..+..+++.+.|++ +|.+. ..+|.|.|+.+++..+ ...+
T Consensus 317 l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrg~Gl~~gie~~~~~~~~~~~~~~~ 378 (443)
T PRK08360 317 IEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIG------------------DVRGIGLMIGVDLVKDRETKERAYEEA 378 (443)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeeccceEEEEEEecCCcccCccHHHH
Confidence 665432 233333444445554443 22222 2256788999998532 1234
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
..+...+...++-+.. ...+.+||+..+ ++.+.+++.|+++|.
T Consensus 379 ~~~~~~l~~~Gi~~~~---------------------------~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~ 425 (443)
T PRK08360 379 AKVVWRAWELGLIVTF---------------------------FSGNVLRIQPPLTIEKEVLDEGLDILEEAIE 425 (443)
T ss_pred HHHHHHHHHCCeEEee---------------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 4555555544433221 013578886665 445566666666654
No 283
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=4.9e-13 Score=144.03 Aligned_cols=254 Identities=14% Similarity=0.155 Sum_probs=157.0
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc-------ccC
Q 009523 197 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-------PKM 264 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l-------~~~ 264 (532)
.+.++...+|.++|+++.+. +.+.+++||++|+..+++... ....+||..+..|++.......+- ..+
T Consensus 81 ~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~ 160 (445)
T PRK08593 81 YMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKY 160 (445)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCC
Confidence 35688889999999998753 357777999999999987432 223568888888888432111110 001
Q ss_pred C---cEEEEeCCCC-----------------HHHHHHhhc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009523 265 G---ITATVIDPAD-----------------MEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 316 (532)
Q Consensus 265 G---v~v~~vd~~d-----------------le~Le~al~----~~~tklV~lesP~NptG~v~d----l~~I~~la~~~ 316 (532)
+ ..+..++..| ++++++.+. ..++.+|++|.+.+..|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~ 240 (445)
T PRK08593 161 GPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH 240 (445)
T ss_pred CCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 0 1122233111 134554442 236999999999988888876 89999999999
Q ss_pred CCEEEEECCCCCC-C-----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHH
Q 009523 317 GAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 390 (532)
Q Consensus 317 gi~lIvDet~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~ 390 (532)
|+++|+||++... . .........|+++ ++|.++++ ..+|++++++++++.+......+....+|..+..+
T Consensus 241 g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t--~gK~l~~G--~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa 316 (445)
T PRK08593 241 GILFAVDDIQQGLGRTGKWSSISHFNITPDLMS--FGKSLAGG--MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAA 316 (445)
T ss_pred CCEEEEechhhCCCcCchHHHHHhcCCCCCEee--ecccccCC--cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHH
Confidence 9999999996421 1 1122233467775 89999854 45788999999888775322222333567777666
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------H
Q 009523 391 IRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------L 457 (532)
Q Consensus 391 l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------~ 457 (532)
+..++.+.. .+++..+..+++.+.|++ +|.+.. .+|.|.++.+++..+ .
T Consensus 317 ~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~Gl~~gi~l~~~~~~~~~~~ 378 (445)
T PRK08593 317 LATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGD------------------VRGYGLSIGIDIVSDKKLKTRDN 378 (445)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEE------------------EeccceEEEEEEecCCCcCCCcH
Confidence 666665532 233334444555555543 332322 256788888888531 2
Q ss_pred HHHHHHHHHcCCCce
Q 009523 458 TATIKFIDALKIPYI 472 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i 472 (532)
.....+...+...++
T Consensus 379 ~~~~~~~~~~~~~Gv 393 (445)
T PRK08593 379 EAALKICNYCFEHGV 393 (445)
T ss_pred HHHHHHHHHHHHCCe
Confidence 234556665544443
No 284
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.60 E-value=1.1e-12 Score=140.32 Aligned_cols=288 Identities=15% Similarity=0.134 Sum_probs=173.6
Q ss_pred CCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHh-c----ccC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-L----PKM 264 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~-l----~~~ 264 (532)
+....++...+|.++|+++... +.+++++||++|+..+++... ....+|+.....|+|.......+ - ...
T Consensus 70 ~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 149 (420)
T TIGR00700 70 FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKS 149 (420)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCccccc
Confidence 3445677788899999988742 568889999999999987432 23357888888888843221111 0 011
Q ss_pred Cc-----EEEEeCCC----------------CHHHHHHhhc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHh
Q 009523 265 GI-----TATVIDPA----------------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 315 (532)
Q Consensus 265 Gv-----~v~~vd~~----------------dle~Le~al~----~~~tklV~lesP~NptG~v~d----l~~I~~la~~ 315 (532)
+. .+..++.. +++.+++.+. ..++.+|++|.....+|.+.+ +++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~ 229 (420)
T TIGR00700 150 GFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE 229 (420)
T ss_pred CCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 12222210 2456776652 236999999999888888776 8899999999
Q ss_pred CCCEEEEECCCCCCCc------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHH
Q 009523 316 KGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 389 (532)
Q Consensus 316 ~gi~lIvDet~a~~~~------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l 389 (532)
||+++|+||++..... ........|+++ ++|.++++ ...|++++++++++.+...........+|..+..
T Consensus 230 ~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G--~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aa 305 (420)
T TIGR00700 230 HGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLADG--LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAA 305 (420)
T ss_pred cCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccCC--cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHH
Confidence 9999999999654211 122233467665 89999953 5688899999888776532221222345777666
Q ss_pred HHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC------CH
Q 009523 390 IIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DL 457 (532)
Q Consensus 390 ~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g------~~ 457 (532)
++..++.+.. ..++..+..+++.+.|++ +|.+..+ ++.|.++++++.. +.
T Consensus 306 a~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v------------------rg~G~~~~i~~~~~~~~~~~~ 367 (420)
T TIGR00700 306 ALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV------------------RGLGAMIAVELVDPGTTEPDA 367 (420)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe------------------eccceEEEEEEecCCCCCccH
Confidence 6555554321 112222333334444433 3322222 3467899998832 12
Q ss_pred HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQAL 529 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL 529 (532)
.....+++.+...++.+..|+. ..+.|||+..+ ++.++.++.|.++|
T Consensus 368 ~~~~~l~~~~~~~Gv~i~p~~~-------------------------f~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 368 GLAERIATAAHAAGLLLLTCGM-------------------------FGNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred HHHHHHHHHHHHCCeEEeccCC-------------------------CCCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 3456677666555655543321 13689999865 33344455555554
No 285
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=9e-13 Score=142.04 Aligned_cols=290 Identities=15% Similarity=0.127 Sum_probs=175.2
Q ss_pred CCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhcc-----cCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMG 265 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l~-----~~G 265 (532)
.-..++...+|.++|+++.+. +.+++++||++|+..+++.. ....++||+....|++.......+-. ..+
T Consensus 94 ~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~ 173 (443)
T PRK06058 94 MVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSG 173 (443)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccc
Confidence 334567788899999988753 46888999999999998732 22347899999999885422111100 001
Q ss_pred -----cEEEEeC----CCC---------------HHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCC
Q 009523 266 -----ITATVID----PAD---------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 317 (532)
Q Consensus 266 -----v~v~~vd----~~d---------------le~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~g 317 (532)
..+..++ ..+ ++.+++.+..+++.+|++|......|.+.| +++|.++|++||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~g 253 (443)
T PRK06058 174 FGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENG 253 (443)
T ss_pred cCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 0111111 111 233444444346999999877765666654 889999999999
Q ss_pred CEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHH
Q 009523 318 AIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII 391 (532)
Q Consensus 318 i~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l 391 (532)
+++|.||++...- .......-.|+++ ++|.++++ ...|++++++++++.+...........+|..+..++
T Consensus 254 illI~DEV~tGfgRtG~~fa~~~~gv~PDiv~--~gK~l~~G--~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~ 329 (443)
T PRK06058 254 VVFIADEVQTGFARTGAWFACEHEGIVPDLIT--TAKGIAGG--LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAAL 329 (443)
T ss_pred CEEEEeccccCCCcChhhhHHHhcCCCCCEEE--EcccccCC--CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHH
Confidence 9999999964321 1122233468887 57999854 467888888888877653322112234677777777
Q ss_pred HhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------HHH
Q 009523 392 RGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTA 459 (532)
Q Consensus 392 ~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------~~~ 459 (532)
..++.+.. ..++..+..+++.+.|++ ++.+.. .+|.|.|+.+++..+ .+.
T Consensus 330 a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~G~~~~i~~~~~~~~~~~~~~ 391 (443)
T PRK06058 330 AAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGD------------------VRGRGAMIAIELVKPGTTEPDAEL 391 (443)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEe------------------eeccceEEEEEEecCCCCCCcHHH
Confidence 77766532 122333334445555543 222222 256788999998532 233
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhhC
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHAI 532 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~l 532 (532)
...+++.+...++.+..++. ..+.||+...+ ++.++.++.|+++|+++
T Consensus 392 ~~~l~~~~~~~Gv~~~~~~~-------------------------~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 392 TKALAAAAHAAGVIVLTCGT-------------------------YGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHCCeEEeccCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 55666666555554433211 13578886443 56677777777777653
No 286
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.60 E-value=5.6e-13 Score=142.90 Aligned_cols=289 Identities=14% Similarity=0.162 Sum_probs=172.4
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHh-cc----cCC--
Q 009523 198 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-LP----KMG-- 265 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~-l~----~~G-- 265 (532)
+.++...+|.+.|+++.+. +.+++++||++|+..+++... ....+||+..+.|++........ .. ..|
T Consensus 81 ~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 81 LAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 4567777888999987763 478899999999988887542 23346777788898854332221 00 001
Q ss_pred -----cEEEEeCC--C------CHHHHHHhhc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEC
Q 009523 266 -----ITATVIDP--A------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDG 324 (532)
Q Consensus 266 -----v~v~~vd~--~------dle~Le~al~----~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDe 324 (532)
+....++. . ++++|+++++ ..++++|++|...+..|.+.+ +++|.++|+++|+++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 11111111 1 1556888775 236899999988755566555 8899999999999999999
Q ss_pred CCCCC-Ccccc--c-ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--
Q 009523 325 TFATP-LNQKA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH-- 398 (532)
Q Consensus 325 t~a~~-~~~~~--l-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~-- 398 (532)
++... ..-.. . ..+.+.-+.|++|.++++ ...|++++++++++.+...........++..+..+...++...
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G--~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGG--FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEeccccCC--CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 97642 11111 1 234444467899999854 5689999999998887654333333456776666666665432
Q ss_pred HHHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-------CHHHHHHHHHHc
Q 009523 399 LRVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDAL 467 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-------~~~~~~~~l~~L 467 (532)
..+++..+..+++.+.|. .+|.+..+ +|.|.++|+++.. +......+...+
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v------------------~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~ 380 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDV------------------RGLGAMIAIELFEDGDHSKPNAKLTAQIVARA 380 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eccceEEEEEEecCCCCCCCCHHHHHHHHHHH
Confidence 122222222333333332 23332222 3457899999942 123456666666
Q ss_pred CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009523 468 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 531 (532)
Q Consensus 468 ~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~~ 531 (532)
...++.+..++ ...+.|||+++.. +.+..++.|.++++.
T Consensus 381 ~~~Gv~~~~~~-------------------------~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 381 RDKGLILLSCG-------------------------PYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred HhCCCEEecCC-------------------------CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 54443322110 1136799999853 344455666666653
No 287
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.60 E-value=4e-13 Score=142.16 Aligned_cols=288 Identities=16% Similarity=0.168 Sum_probs=181.7
Q ss_pred CCCCCc-hhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcch-HHHHHHh-------
Q 009523 195 YGRYGN-PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKT-RIFIETV------- 260 (532)
Q Consensus 195 Y~R~~~-p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t-~~~~~~~------- 260 (532)
-.++.. +...++.++|.++... +.+++.+||++|++++++.. ...+..||.....|++. ...+...
T Consensus 92 ~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~ 171 (447)
T COG0160 92 HTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYK 171 (447)
T ss_pred cCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccc
Confidence 344433 6677788888887764 46888899999999999743 22345788888888773 2222110
Q ss_pred --cccCCcEEEEeCCC-----------------CHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009523 261 --LPKMGITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDL 312 (532)
Q Consensus 261 --l~~~Gv~v~~vd~~-----------------dle~Le~al~~-----~~tklV~lesP~NptG~v~d----l~~I~~l 312 (532)
...+.-.+..++.. ..+.++..+.. .++.++++|......|.+.+ ++++.++
T Consensus 172 ~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~ 251 (447)
T COG0160 172 AGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKL 251 (447)
T ss_pred cCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHH
Confidence 01111223344311 12345554422 25899999999999998876 7899999
Q ss_pred HHhCCCEEEEECCCCC------CCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH-HhhhcCCCccHH
Q 009523 313 CHKKGAIVCIDGTFAT------PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LHHVLGGALNPN 385 (532)
Q Consensus 313 a~~~gi~lIvDet~a~------~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-~~~~~G~~~~~~ 385 (532)
|++||+++|+||++.. .+.+.....-.||++ ++|.+|++ ...|.+++++++.+.... ....++ -+|.
T Consensus 252 ~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~G--~Pl~avv~r~ei~~~~~g~~~~Tf~--GNpv 325 (447)
T COG0160 252 CREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGGG--LPLSAVVGRAEIMDWPPGGHGGTFG--GNPV 325 (447)
T ss_pred HHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEE--ecccccCC--CceeEEeccHHhcccCCcccCCCCC--cCHH
Confidence 9999999999999653 222344444579998 88999973 467888899888772211 222233 3677
Q ss_pred HHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----
Q 009523 386 AAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---- 455 (532)
Q Consensus 386 ~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---- 455 (532)
++..++..|+.+.. -+++..+.-+++.+.|++ +|.|.. .+|.|.|+.+++..
T Consensus 326 a~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~Igd------------------VRG~Glm~giE~v~d~~t 387 (447)
T COG0160 326 ACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGD------------------VRGLGLMIGVELVKDRDT 387 (447)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceec------------------ccccceEEEEEEecCCCC
Confidence 77777777765543 122222333344444432 333322 26788999999863
Q ss_pred ---CHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHH
Q 009523 456 ---DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQA 528 (532)
Q Consensus 456 ---~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~A 528 (532)
+.+...++++.+...++-+.. .|...+.|||..-+ |+.+..++.|+++
T Consensus 388 ~~p~~~~~~~i~~~~~~~Glil~~-------------------------~G~~~nviRi~PPL~is~e~~d~~l~il~~a 442 (447)
T COG0160 388 KEPDAELAAKIVARAFERGLLLLT-------------------------CGPHGNVLRILPPLTISDEELDEGLDILEEA 442 (447)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEec-------------------------cCCCCcEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 235667777776655532211 13346788887554 6778888888888
Q ss_pred Hhh
Q 009523 529 LHA 531 (532)
Q Consensus 529 L~~ 531 (532)
|..
T Consensus 443 l~~ 445 (447)
T COG0160 443 LKE 445 (447)
T ss_pred HHh
Confidence 864
No 288
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=1.5e-12 Score=139.41 Aligned_cols=289 Identities=14% Similarity=0.154 Sum_probs=177.2
Q ss_pred CCCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcc-----c-
Q 009523 195 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----K- 263 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~g---a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~-----~- 263 (532)
+..+.++...+|.++|+++.. .+.+++++||++|+..+++... ....+|+.....|++.......+-. +
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~ 156 (421)
T PRK06777 77 YQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKV 156 (421)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCccccc
Confidence 344567788889999998864 2578899999999999987432 2335788888888885322211100 0
Q ss_pred -CC---cEEEEeCCC----------CHHHHHHhhc----CCCeeEEEEeCCCCCCCcc-cC---HHHHHHHHHhCCCEEE
Q 009523 264 -MG---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVC 321 (532)
Q Consensus 264 -~G---v~v~~vd~~----------dle~Le~al~----~~~tklV~lesP~NptG~v-~d---l~~I~~la~~~gi~lI 321 (532)
++ -.+..++.. +++.+++.++ ..++.+|++|...+..|.. .| +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK06777 157 GFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLI 236 (421)
T ss_pred CCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 00 011122211 2566777774 2368999999998888854 45 8899999999999999
Q ss_pred EECCCCCC-C-----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH
Q 009523 322 IDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 395 (532)
Q Consensus 322 vDet~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~ 395 (532)
+||++... . .......-.|++ +++|.+++ | ...|++++++++++.+...........+|..+..++..++
T Consensus 237 ~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 237 ADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-G-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred EechhhCCccCCchhhhhhcCCCCCEE--eeehhhcC-C-CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99996532 1 111122336766 58999984 3 4688899998888776543221222346777777666666
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------HHHHHHH
Q 009523 396 TLH--LRVQQQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKF 463 (532)
Q Consensus 396 tl~--~r~~~~~~~a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------~~~~~~~ 463 (532)
.+. ..+++..+..+++.+.|++. |.+.. .+|.|.++.+++... .+....+
T Consensus 313 ~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~G~~~~i~~~~~~~~~~~~~~~~~l 374 (421)
T PRK06777 313 VIAEEKLCQRALILGAHLVEVLEKAKASCPAIVD------------------IRARGSMVAVEFNDPQTGKPSPEFTRQY 374 (421)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEE------------------ecCceEEEEEEEecCccCCccHHHHHHH
Confidence 543 22334445555566655542 22222 245788888887531 1234555
Q ss_pred HHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 464 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 464 l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
...+...++.+..++. ..+.|||...+ ++.++.++.|+++|.
T Consensus 375 ~~~~~~~Gv~i~~~~~-------------------------~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 375 QRQALEEGLLLLSCGV-------------------------HGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHhCCeEEeecCC-------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 5555445555544321 13578998864 445555666666553
No 289
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=5.1e-13 Score=143.11 Aligned_cols=288 Identities=13% Similarity=0.112 Sum_probs=174.4
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHh------c-ccC
Q 009523 197 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------L-PKM 264 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~------l-~~~ 264 (532)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+|+.....|++.......+ . ..+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 56788888899999998753 468888999999999987442 23457888888888843111010 0 001
Q ss_pred C---cEEEEeCCC----------CHHHHHHhhc----CCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEE
Q 009523 265 G---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 265 G---v~v~~vd~~----------dle~Le~al~----~~~tklV~lesP~NptG~v~-d---l~~I~~la~~~gi~lIvD 323 (532)
+ ..+..++.. +++++++.++ ..++++|++|.....+|.+. | +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1 122333322 1455677653 23699999998876677554 3 789999999999999999
Q ss_pred CCCCCC-C-----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH
Q 009523 324 GTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 397 (532)
Q Consensus 324 et~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl 397 (532)
|++... . .........|+ .+++|.++++ ...|++++++++++.+...........+|..+..++..++.+
T Consensus 239 Ev~tG~gr~G~~~a~~~~gv~pDi--~tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l 314 (425)
T PRK07495 239 EVQTGFARTGKLFAMEHHEVAADL--TTMAKGLAGG--FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVI 314 (425)
T ss_pred chhhcCCcCCCceeecccCCCCCE--EeehhhhcCC--ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 996432 1 11222223455 5589999864 467889999888877653222222234677777666666655
Q ss_pred HH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------HHHHHHHHH
Q 009523 398 HL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKFID 465 (532)
Q Consensus 398 ~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------~~~~~~~l~ 465 (532)
.. ..++..+..+++.+.|++ +|.+.. .+|.|.++++++..+ ......+..
T Consensus 315 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~ 376 (425)
T PRK07495 315 EEEDLCERANQLGNRLKQRLASLRETVPEIAD------------------IRGPGFMNAVEFNDADSGLPSAEFANRVRL 376 (425)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHhhCCCeee------------------eecCceEEEEEEecCCCCCccHHHHHHHHH
Confidence 32 223333444445555543 222222 245688999999542 122345555
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS----vG~ed~~dli~dL~~AL~~ 531 (532)
.+...++-+... |...+.|||. +..++.++.++.|+++|++
T Consensus 377 ~~~~~Gvl~~~~-------------------------g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 377 KALEKGLILLTC-------------------------GVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred HHHHCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 554444332210 1113567777 4446778888888888864
No 290
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.58 E-value=4.4e-14 Score=148.07 Aligned_cols=238 Identities=21% Similarity=0.237 Sum_probs=144.7
Q ss_pred HHHHHhhhCCC----cE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHh-c-----ccCCcEEEE--eCC
Q 009523 207 EEKMSALEGAE----ST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-L-----PKMGITATV--IDP 273 (532)
Q Consensus 207 e~~lA~l~ga~----~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~-l-----~~~Gv~v~~--vd~ 273 (532)
++++.++++++ .+ +-.-||+.|+.+++.+|++|||+|+..+..+++....-... . .....++.. +|.
T Consensus 72 ~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~ 151 (399)
T PF00464_consen 72 IERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDP 151 (399)
T ss_dssp HHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-T
T ss_pred HHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeec
Confidence 46777889987 54 55689999999999999999999999998887743110000 0 001123323 232
Q ss_pred ----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC-----CCCcccccccCCcEEEE
Q 009523 274 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-----TPLNQKALSLGADLVLH 344 (532)
Q Consensus 274 ----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a-----~~~~~~~l~~gaDivv~ 344 (532)
.|.+++++.+++.++|+|++-.-+ .....|++++.++|++.|++|++|.++. .+...+|++. +|+++.
T Consensus 152 ~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~ 228 (399)
T PF00464_consen 152 DTGLIDYDELEKLAKEHKPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTG 228 (399)
T ss_dssp TTSSB-HHHHHHHHHHH--SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEE
T ss_pred CCCeECHHHHHHHHhhcCCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEe
Confidence 289999999887789999984333 4567899999999999999999999943 3556788887 999999
Q ss_pred CCccccCCCCCcEEEEEEeC--------------hHHHHHHHHHhh--hcCCC-ccHHHHHHHHHhHH----HHHHHHHH
Q 009523 345 SATKFIGGHNDVLAGSISGS--------------GKLVTQIRNLHH--VLGGA-LNPNAAYLIIRGMK----TLHLRVQQ 403 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~--------------~~li~~l~~~~~--~~G~~-~~~~~a~l~l~~l~----tl~~r~~~ 403 (532)
|.||.|.|+. +|+++.+ +++.+++.+... ..|+. ++..+ .++..-.+ ......++
T Consensus 229 sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~ia-alAval~ea~~~~fk~Ya~q 304 (399)
T PF00464_consen 229 STHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIA-ALAVALKEALSPEFKEYAKQ 304 (399)
T ss_dssp ESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHH-HHHHHHHHHTSHHHHHHHHH
T ss_pred eccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHH-HHHHHHhcccCHHHHHHHHH
Confidence 9999999985 8999998 678888876432 12221 22222 22211111 24566778
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---CHHHHHHHHHHcC
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALK 468 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---~~~~~~~~l~~L~ 468 (532)
..+|++.|++.|.+.. + +|..-+.. ..++++.+.. +...+.+++++..
T Consensus 305 Vv~NAk~La~~L~~~G-~-~v~~ggTd---------------~H~vlvd~~~~~~~g~~a~~~Le~~g 355 (399)
T PF00464_consen 305 VVKNAKALAEALQERG-F-KVVTGGTD---------------NHQVLVDLRSFGIDGKEAEKALEEAG 355 (399)
T ss_dssp HHHHHHHHHHHHHHTT---EEGGGS-S---------------SSEEEEEGGGGTS-HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCC-c-EEEECCCC---------------CCeEEEEecccccchHHHHHHHHhcC
Confidence 8899999999999863 3 33332322 2378888753 2345666666654
No 291
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.58 E-value=6.4e-13 Score=143.10 Aligned_cols=288 Identities=12% Similarity=0.145 Sum_probs=174.3
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHH-H--------H
Q 009523 198 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-I--------E 258 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~~-~--------~ 258 (532)
+.++...+|.++|+++.. .+.+.+++||++|+..+++.... + ..+||.....|++.... + .
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 567888889999999874 36788999999999999874321 1 24788888888874211 1 0
Q ss_pred HhcccCCcEEEEeCCC------------------CHHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009523 259 TVLPKMGITATVIDPA------------------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLC 313 (532)
Q Consensus 259 ~~l~~~Gv~v~~vd~~------------------dle~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I~~la 313 (532)
.........+..++.. ..+++++.++. .++.+|++|......|.+.| +++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 0001111112222211 13567777642 36899999999988899888 99999999
Q ss_pred HhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-------hhhcCC
Q 009523 314 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 380 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~~~~G~ 380 (532)
+++|+++|+||++... +..+....-.|+++ ++|.++++. ...|.+++++++++.+... ......
T Consensus 249 ~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 325 (445)
T PRK09221 249 DKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNGA-IPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY 325 (445)
T ss_pred HHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccCc-ccceeeEEcHHHHHhhccCcccccccccccCC
Confidence 9999999999996321 11222233458776 889998642 2356678888887766421 111112
Q ss_pred CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC--
Q 009523 381 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-- 456 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-- 456 (532)
..+|..+..++..++.+.. .+++..+..+++.+.|++..+ +|.+ ...+|.|.++.+++...
T Consensus 326 ~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v----------~~vrg~Gl~~~v~~~~~~~ 390 (445)
T PRK09221 326 SAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKG-----LPHV----------IDIRNIGLVAGIELAPRPG 390 (445)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcc-----CCCE----------EEEecCceEEEEEEecccc
Confidence 2467777666666665532 234444555555565554311 2211 12356788888888531
Q ss_pred --HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 457 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 457 --~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
......+.+.+...++-+..+ .+.|||+..+ ++++.+++.|+++|.
T Consensus 391 ~~~~~~~~~~~~~~~~Gv~~~~~----------------------------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 442 (445)
T PRK09221 391 APGARGYEAFMKCFEKGLLVRYT----------------------------GDTIALSPPLIIEKAQIDELVDALGDALR 442 (445)
T ss_pred cccchHHHHHHHHHHCCeEEeec----------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 112344555554444333211 2468888554 556667777777765
Q ss_pred h
Q 009523 531 A 531 (532)
Q Consensus 531 ~ 531 (532)
+
T Consensus 443 ~ 443 (445)
T PRK09221 443 A 443 (445)
T ss_pred h
Confidence 4
No 292
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.58 E-value=1.1e-12 Score=140.02 Aligned_cols=285 Identities=13% Similarity=0.054 Sum_probs=167.7
Q ss_pred CCchhHHHHHHHHHhhh--C--CC-cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHh------ccc
Q 009523 198 YGNPTTVVVEEKMSALE--G--AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------LPK 263 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~--g--a~-~~i~~-sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~------l~~ 263 (532)
+.++...+|.++|+++. + .. .++++ +||++|+..+++... ....+||.-...|+|........ -..
T Consensus 75 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~ 154 (412)
T TIGR02407 75 MATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQG 154 (412)
T ss_pred cCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccC
Confidence 35677788888998874 2 22 35554 799999999988542 23367888888888853221111 011
Q ss_pred CC---cEEEEeCC--------CCHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEE
Q 009523 264 MG---ITATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 264 ~G---v~v~~vd~--------~dle~Le~al~~-----~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvD 323 (532)
++ ..+..++. ++++.+++.+.+ .++.+|++|...++.|.+.+ +++|.++|++||+++|+|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 234 (412)
T TIGR02407 155 AGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234 (412)
T ss_pred CCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 11 12333443 246778888852 25799999999999888543 789999999999999999
Q ss_pred CCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-
Q 009523 324 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT- 396 (532)
Q Consensus 324 et~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t- 396 (532)
|++... +.........|+++ ++|.+++.| ...|++++++++ +.+...........++..+..+...++.
T Consensus 235 EV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G-~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~ 310 (412)
T TIGR02407 235 DIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYG-LPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYY 310 (412)
T ss_pred chhhCCCccchhHHhcccCCCCCEEE--echhccCCc-cceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHH
Confidence 997521 12233445678876 679999744 467888887765 4332111111112345555444445543
Q ss_pred HHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC
Q 009523 397 LHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 470 (532)
Q Consensus 397 l~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~ 470 (532)
+.. ..++..+..+++.+.|+. ++.+. . ..+|.|.+++++++.. .....+...+...
T Consensus 311 i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~----------------~vrg~Gl~~~l~l~~~-~~~~~~~~~~~~~ 372 (412)
T TIGR02407 311 WSDDAFEKAVQRKSEIIQERLDRIVAEYPELI-K----------------QVRGRGLMQGIECGDG-DLAGKIAKAAFEN 372 (412)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHhhCCCce-E----------------eeecceeEEEEEecCh-HHHHHHHHHHHHC
Confidence 211 122222333444444432 22110 0 1245788999999753 4456677766655
Q ss_pred ceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH----HHHHHHHHHH
Q 009523 471 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE----DLKADVLQAL 529 (532)
Q Consensus 471 ~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~----dli~dL~~AL 529 (532)
++.+... +..++.|||+..+-.++ .+++.|+++|
T Consensus 373 Gv~v~~~-------------------------~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l 410 (412)
T TIGR02407 373 GLIIETS-------------------------GPNDEVIKLLPPLTIDEETLQQGLDILEQAV 410 (412)
T ss_pred CCEEecc-------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 5444321 11246799988874444 4444555544
No 293
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.57 E-value=4.5e-13 Score=139.58 Aligned_cols=222 Identities=20% Similarity=0.266 Sum_probs=151.4
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhc------
Q 009523 191 ASFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL------ 261 (532)
Q Consensus 191 ~~~~Y~R~~~p~~~~Le~~lA~l~ga-~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l------ 261 (532)
.+..|+. ++..--++.+.|.++.+. +.+-+++||++|...+++.. ....|+|+....+|++....+-.-.
T Consensus 84 ~G~~fg~-Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t 162 (432)
T COG0001 84 RGLSFGA-PTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAAT 162 (432)
T ss_pred hcCCCCC-CCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCccc
Confidence 4566665 333344566888888876 88999999999999988743 2345899999999999654432111
Q ss_pred ----ccCCc------EEEEeCCCCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECC
Q 009523 262 ----PKMGI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 262 ----~~~Gv------~v~~vd~~dle~Le~al~~~--~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet 325 (532)
...|+ .+..++-+|++.+++++++. ++.+|++|..-...|.+.| ++.|.++|+++|+++|.||+
T Consensus 163 ~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 11122 23445678999999999764 7999999988766788777 78999999999999999999
Q ss_pred CCCC-----CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhc-CCCc--cHHHHHHHHHhHHHH
Q 009523 326 FATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGAL--NPNAAYLIIRGMKTL 397 (532)
Q Consensus 326 ~a~~-----~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~-G~~~--~~~~a~l~l~~l~tl 397 (532)
...+ -.+.....-+|+.+ +.|.+||+ ...|++.++.++++.+......+ ++++ +|....+....++.+
T Consensus 243 iTGFR~~~gGaq~~~gi~PDltt--lGKiIGGG--lP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l 318 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLTT--LGKIIGGG--LPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEEL 318 (432)
T ss_pred hhhcccCCcccccccCcCcchhh--hhhhhcCC--cceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHH
Confidence 4321 12344445567777 89999976 47899999999998776543222 2222 455444444444444
Q ss_pred HH---HHHHHHHHHHHHHHHHHh
Q 009523 398 HL---RVQQQNSTALRMAKILEA 417 (532)
Q Consensus 398 ~~---r~~~~~~~a~~la~~L~~ 417 (532)
.. -.++..+..++|.+.|++
T Consensus 319 ~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 319 MTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred HhcccHHHHHHHHHHHHHHHHHH
Confidence 33 345555666777766654
No 294
>PRK05965 hypothetical protein; Provisional
Probab=99.57 E-value=1.3e-12 Score=141.23 Aligned_cols=289 Identities=16% Similarity=0.169 Sum_probs=175.6
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHHh------c
Q 009523 198 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETV------L 261 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~~~~~~------l 261 (532)
+.++...+|.++|+++.. .+.+++++||++|+..+++.... + ..+||.....|++....-... -
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~ 166 (459)
T PRK05965 87 FGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFH 166 (459)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhh
Confidence 457777889999999874 35677889999999999975321 2 257898899998853211000 0
Q ss_pred ccCCc---EEEEeCC---------CC--------HHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 262 PKMGI---TATVIDP---------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 262 ~~~Gv---~v~~vd~---------~d--------le~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
..++. .+..++. .| ++++++.+.. +++.+|++|......|.+.+ +++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 167 RGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred cccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 01111 1122221 23 2567777752 36899999998877787765 789999999
Q ss_pred hCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-----hhcCC--C
Q 009523 315 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG--A 381 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~--~ 381 (532)
+||+++|.||++... +.......-.||++ +.|.++|+- +..|.+++++++.+.+.... ..++. .
T Consensus 247 ~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 247 ELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSGY-VPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred HcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccCC-cceeEEEEcHHHHHHHhccccccccccccCCCC
Confidence 999999999995432 22333444579998 789998752 24677788888887664210 01222 2
Q ss_pred ccHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--
Q 009523 382 LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-- 457 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-- 457 (532)
.+|..+..++..++.+... +++..+...++.+.|++. . .+|.+ ...+|.|.|+.+++..+.
T Consensus 324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l---~--~~~~v----------~~vrG~Gl~~gie~~~~~~~ 388 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDAL---R--AHPLV----------GDVRGRGLLGALELVADKAT 388 (459)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh---c--cCCCE----------EEEeecceEEEEEEeccccc
Confidence 4677777777777665421 222333334444444431 1 12211 123678999999985321
Q ss_pred --------HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHH
Q 009523 458 --------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADV 525 (532)
Q Consensus 458 --------~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS----vG~ed~~dli~dL 525 (532)
....++...+...++-+.. ..++.||+. +..++.+++++.|
T Consensus 389 ~~~~~~~~~~~~~i~~~~~~~Gll~~~---------------------------~g~~~i~~~PpL~it~~ei~~~~~~l 441 (459)
T PRK05965 389 KTPFDAALDPADRIFDRAYANGLVFRA---------------------------FGDGVLGFAPALCCTEGEFDLIFERT 441 (459)
T ss_pred cCCCCchhHHHHHHHHHHHhCCeEEEe---------------------------cCCcEEEEECCCcCCHHHHHHHHHHH
Confidence 1234555555444432211 013567877 5557777888888
Q ss_pred HHHHhh
Q 009523 526 LQALHA 531 (532)
Q Consensus 526 ~~AL~~ 531 (532)
+++|+.
T Consensus 442 ~~~l~~ 447 (459)
T PRK05965 442 RKTLDD 447 (459)
T ss_pred HHHHHH
Confidence 888764
No 295
>PRK12403 putative aminotransferase; Provisional
Probab=99.57 E-value=1.8e-12 Score=140.24 Aligned_cols=235 Identities=18% Similarity=0.225 Sum_probs=146.7
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc-------cCCCE-EEEcCCCCcch-HHHHHHh-c---cc
Q 009523 199 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAGGH-IVTTTDCYRKT-RIFIETV-L---PK 263 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all-------~~Gd~-VIv~~~~y~~t-~~~~~~~-l---~~ 263 (532)
.++...+|.++|+++.+. +.+++++||++|+..+++... ++++. |+.....|++. ...+... . ..
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 567788999999999863 678999999999999998653 23334 45556667764 2211100 0 00
Q ss_pred CC---cEEEEeCCC-------C----------HHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009523 264 MG---ITATVIDPA-------D----------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 316 (532)
Q Consensus 264 ~G---v~v~~vd~~-------d----------le~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la~~~ 316 (532)
.+ -.+..++.. + ++++++.+. ..++.+|++|......|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012222211 1 245655552 136889999999888888887 99999999999
Q ss_pred CCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCC--ccHHH
Q 009523 317 GAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGA--LNPNA 386 (532)
Q Consensus 317 gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~--~~~~~ 386 (532)
|+++|+||++... +.......-.||++ ++|.++++- ...|.+++++++.+.+..... .++.+ .+|..
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~-~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~ 332 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGY-VPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVA 332 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccccc-cceEEEEECHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 9999999996321 11233334468887 899999752 134555678888777643111 12323 56888
Q ss_pred HHHHHHhHHHHHH--HHHHHH-HHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 387 AYLIIRGMKTLHL--RVQQQN-STALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 387 a~l~l~~l~tl~~--r~~~~~-~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
+..++..++.+.. .+++.. ++.+++.+.|++ +|.+.. .+|.|.|+.+++.
T Consensus 333 ~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~gie~~ 389 (460)
T PRK12403 333 AAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGE------------------VQGAGLVAALQFA 389 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEe------------------EeecceEEEEEEc
Confidence 8777777776643 223332 445555555543 332222 2567889999995
No 296
>PRK06105 aminotransferase; Provisional
Probab=99.57 E-value=1.3e-12 Score=141.20 Aligned_cols=242 Identities=14% Similarity=0.166 Sum_probs=153.1
Q ss_pred CCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc------c-CC-CEEEEcCCCCcchHHHHHHh----
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-AG-GHIVTTTDCYRKTRIFIETV---- 260 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all------~-~G-d~VIv~~~~y~~t~~~~~~~---- 260 (532)
++++.++...+|.++|+++.+. +.+++++||++|+.++++... . +| .+||.....|++.......+
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 4456788888999999998754 568888999999999998642 1 23 47888888888743111000
Q ss_pred --cccCCc---EEEEeCCC------------------CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHH
Q 009523 261 --LPKMGI---TATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVS 310 (532)
Q Consensus 261 --l~~~Gv---~v~~vd~~------------------dle~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~ 310 (532)
.+.++. .+..++.. ..+++++++. ..++.+|++|......|.+.+ +++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 001111 12222211 1356777663 236899999999887888877 89999
Q ss_pred HHHHhCCCEEEEECCCCC-C-----CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-------hh
Q 009523 311 DLCHKKGAIVCIDGTFAT-P-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HV 377 (532)
Q Consensus 311 ~la~~~gi~lIvDet~a~-~-----~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~ 377 (532)
++|++||+++|+||++.. + +.......-.||++ ++|.++++. ...|++++++++.+.+.... ..
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~-~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSY-QPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCc-ccceEEEEcHHHHHHHhcccccCcccccC
Confidence 999999999999999632 1 11233344578886 899998752 34778888888887765321 11
Q ss_pred cCCCccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 378 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 378 ~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
.....+|..+..++..++.+.. .+++..+..+++.+.|++. .+ +|.+ .+.+|.|.|+.|++.
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l---~~--~~~v----------~~vrG~Gl~~gie~~ 386 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL---AD--HPLV----------GEVRGVGLIAAVELV 386 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh---hc--CCCe----------EEEEecceEEEEEEe
Confidence 1123567777777777776643 2334444445555555432 01 1211 123678899999985
No 297
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.56 E-value=1.9e-12 Score=139.41 Aligned_cols=288 Identities=11% Similarity=0.138 Sum_probs=171.7
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHH-HH--------H
Q 009523 198 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRI-FI--------E 258 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~-~~--------~ 258 (532)
+.+|...+|.++|+++.. .+.+.+++||++|+..+++.... + ..+||+....|++... .+ .
T Consensus 86 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~ 165 (442)
T PRK13360 86 MGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR 165 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence 457888889999999874 36788999999999999874321 2 2579999988888421 11 0
Q ss_pred HhcccCCcEEEEeCCC------------------CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009523 259 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 313 (532)
Q Consensus 259 ~~l~~~Gv~v~~vd~~------------------dle~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la 313 (532)
.........+.+++.. .+++|+++++ ..++.+|++|......|.+.| +++|.++|
T Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc 245 (442)
T PRK13360 166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREIC 245 (442)
T ss_pred hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 0001001112222211 1457777774 236899999999988899988 99999999
Q ss_pred HhCCCEEEEECCCCC-C-----CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-------hhhcCC
Q 009523 314 HKKGAIVCIDGTFAT-P-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 380 (532)
Q Consensus 314 ~~~gi~lIvDet~a~-~-----~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~~~~G~ 380 (532)
++||+++|+||++.. + +.........|+++ ++|.++++. ...|.+++++++.+.+... ......
T Consensus 246 ~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt--~gK~l~gG~-~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~ 322 (442)
T PRK13360 246 DKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLT--CAKGLTNGA-IPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTY 322 (442)
T ss_pred HHcCCEEEEechhhCCCCCccchhhhhcCCCCceee--eeeccccCc-cceEEEEEcHHHHHHhhcCCccccccccCCCC
Confidence 999999999999632 1 11222334468775 899998642 2345577788887766421 111112
Q ss_pred CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC--
Q 009523 381 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-- 456 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-- 456 (532)
..+|..+..++..++.+.. ..++..+..+++.+.|++... +|.+ ...+|.|.++.+++...
T Consensus 323 ~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v----------~~vrG~Gl~~~~~l~~~~~ 387 (442)
T PRK13360 323 SGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRD-----APHV----------IDIRNLGLVGAVELAPRDG 387 (442)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCe----------eeeeccceEEEEEEecCCC
Confidence 2467777776666766532 223333444555555543211 1211 11245677777777421
Q ss_pred --HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 457 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 457 --~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
...+..+.+.+...|+-+.. ..+.|||+..+ ++++.+++.|+++|+
T Consensus 388 ~~~~~~~~~~~~l~~~Gvl~~~----------------------------~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 439 (442)
T PRK13360 388 KPGKRAYEVFLKCFEKGLMIRY----------------------------TGDILALSPPLIIEEAQIDELFDILAQALK 439 (442)
T ss_pred CcchhHHHHHHHHHHCCcEEEe----------------------------cCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 12344555555433433221 12468888554 556666667766665
Q ss_pred h
Q 009523 531 A 531 (532)
Q Consensus 531 ~ 531 (532)
+
T Consensus 440 ~ 440 (442)
T PRK13360 440 E 440 (442)
T ss_pred H
Confidence 4
No 298
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.56 E-value=1.2e-12 Score=140.22 Aligned_cols=288 Identities=15% Similarity=0.107 Sum_probs=168.6
Q ss_pred CCchhHHHHHHHHHhhhC----CC-cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHH-HHHHh-----ccc
Q 009523 198 YGNPTTVVVEEKMSALEG----AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETV-----LPK 263 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g----a~-~~i~~-sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~-~~~~~-----l~~ 263 (532)
+.++...+|.++|+++.. .+ .+.++ +||++|+..+++... ....+||.....|+|... .+... -..
T Consensus 79 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 158 (425)
T PRK09264 79 MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQG 158 (425)
T ss_pred cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccC
Confidence 456777888889988642 23 34454 699999999987542 233578888888888432 11110 011
Q ss_pred CCc---EEEEeCC--------CCHHHHHHhhcC-----CCeeEEEEeCCCCCCCccc----CHHHHHHHHHhCCCEEEEE
Q 009523 264 MGI---TATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 264 ~Gv---~v~~vd~--------~dle~Le~al~~-----~~tklV~lesP~NptG~v~----dl~~I~~la~~~gi~lIvD 323 (532)
++. .+..++. .|++++++.+++ .++.+|++|...+..|.+. .+++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (425)
T PRK09264 159 AGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVD 238 (425)
T ss_pred CCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 111 2334443 367888888853 2478999999988777655 3889999999999999999
Q ss_pred CCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhHH
Q 009523 324 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMK 395 (532)
Q Consensus 324 et~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~~~~~a~l~l~~l~ 395 (532)
|++... +.........|+++ ++|.+++.| ...|++++++++ ..+... ..+.+ .+|..+..++..++
T Consensus 239 EV~tG~GrtG~~~~~~~~~v~PDi~t--~~K~l~~~G-~pigav~~~~~i-~~~~~~--~~~~T~~gnp~~~aaa~a~l~ 312 (425)
T PRK09264 239 DIQAGCGRTGTFFSFERAGITPDIVT--LSKSISGYG-LPMALVLIKPEL-DVWKPG--EHNGTFRGNNLAFVTATAALE 312 (425)
T ss_pred chhhCCccccHHHHHhhcCCCCCEEE--eccccCCCc-cceEEEEEchhh-hccCCC--ccCCCCCCCHHHHHHHHHHHH
Confidence 997431 12233344568775 679998755 456778887765 333211 11211 24555444444442
Q ss_pred HH-H--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009523 396 TL-H--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 472 (532)
Q Consensus 396 tl-~--~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i 472 (532)
.+ . ...++..++.+++.+.|++... .+|.+. ...+|.|.+++++++. ......+...+...++
T Consensus 313 ~~~~~~~l~~~~~~~g~~l~~~l~~l~~----~~~~~~---------~~vrg~Gl~~~i~l~~-~~~~~~l~~~~~~~Gv 378 (425)
T PRK09264 313 EYWSDDAFEKEVKAKGELVRERLEEIAA----KYPGLG---------AEVRGRGMMQGIDFGD-GELAGKIAAEAFENGL 378 (425)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHH----hCCCce---------ecceecccEEEEEecC-hHHHHHHHHHHHHCCC
Confidence 21 1 1223333445555555543210 112110 1124568899999964 3445566666654454
Q ss_pred eecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHh
Q 009523 473 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALH 530 (532)
Q Consensus 473 ~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dli~dL~~AL~ 530 (532)
.+... +...+.|||+.. .++.++.++.|.++|+
T Consensus 379 ~~~~~-------------------------~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~ 415 (425)
T PRK09264 379 IIETS-------------------------GPEDEVVKLLPPLTIDEEELEEGLDILEEAVA 415 (425)
T ss_pred EEecc-------------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 33221 112367888866 4556666777777665
No 299
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.56 E-value=2.5e-12 Score=140.23 Aligned_cols=288 Identities=14% Similarity=0.123 Sum_probs=173.7
Q ss_pred CCchhHHHHHHHHHhhhC-C--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchHH-HHHHh-c---
Q 009523 198 YGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRI-FIETV-L--- 261 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g-a--~~~i~~sSG~~Ai~~al~all-------~~G-d~VIv~~~~y~~t~~-~~~~~-l--- 261 (532)
..++...+|.++|.+++. . +.+++++||++|+..+++... ++| .+||..+..|++... .+... .
T Consensus 130 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~ 209 (504)
T PLN02760 130 RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPAL 209 (504)
T ss_pred cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhh
Confidence 356777889999988853 3 357889999999999998653 123 578888888888531 11100 0
Q ss_pred -ccCCc---EEEEeCCC----------C--------HHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009523 262 -PKMGI---TATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 312 (532)
Q Consensus 262 -~~~Gv---~v~~vd~~----------d--------le~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~l 312 (532)
..++. .+..++.. + .++|++++. +.++.+|++|......|.+.| +++|.++
T Consensus 210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~l 289 (504)
T PLN02760 210 HQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAV 289 (504)
T ss_pred ccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 01111 02222210 1 245666663 235889999999888898888 9999999
Q ss_pred HHhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-----hhcCC-
Q 009523 313 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG- 380 (532)
Q Consensus 313 a~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~- 380 (532)
|++||+++|+||++... +.+.....-+|+++ ++|.++++. ...|.+++++++.+.+.... ...+.
T Consensus 290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~-~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T 366 (504)
T PLN02760 290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAY-MPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366 (504)
T ss_pred HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCc-cccceEeecHHHHhhhhcccccccCcccCCC
Confidence 99999999999996321 11222334478776 899998642 23566788888888775310 01122
Q ss_pred -CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH
Q 009523 381 -ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 457 (532)
Q Consensus 381 -~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~ 457 (532)
..+|..+..++..++.+.. .+++..+..+++.+.|++. .+ +|.+ ...+|.|.|+.+++..+.
T Consensus 367 ~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l---~~--~~~v----------~~vrG~Gl~~gie~~~~~ 431 (504)
T PLN02760 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF---SG--SPII----------GEIRGTGLILGTEFVDNK 431 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hc--CCCe----------eeEEeCceEEEEEEecCC
Confidence 2367877777777776543 2334444455555555442 11 1211 123678899999985321
Q ss_pred ----------HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHH
Q 009523 458 ----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKA 523 (532)
Q Consensus 458 ----------~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dli~ 523 (532)
.....+.+.+...|+-+.. ..+.|||+.. .++++.+++
T Consensus 432 ~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----------------------------~g~~lrl~Ppl~it~eeid~~~~ 483 (504)
T PLN02760 432 SPNDPFPAEWGVGAYFGAECKKRGMLVRV----------------------------AGDNIMMSPPLIITPEEVDELIS 483 (504)
T ss_pred cccccccchhHHHHHHHHHHHhCCcEEEe----------------------------cCCEEEEECCCCCCHHHHHHHHH
Confidence 1234455555444432211 0235788744 466777777
Q ss_pred HHHHHHhh
Q 009523 524 DVLQALHA 531 (532)
Q Consensus 524 dL~~AL~~ 531 (532)
.|+++|..
T Consensus 484 ~l~~al~~ 491 (504)
T PLN02760 484 IYGKALKA 491 (504)
T ss_pred HHHHHHHH
Confidence 77777753
No 300
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.56 E-value=1e-12 Score=139.34 Aligned_cols=212 Identities=19% Similarity=0.220 Sum_probs=144.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe-------
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI------- 271 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v------- 271 (532)
++|+..+||+.+++++|.+.++.++||+.|+.+++...+++||.| +...|..+... .....|....-+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~a---hI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRY---HQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHH---HHHhCCcEEEeeecccccc
Confidence 688999999999999999999999999999998766668999965 55555544322 112234322211
Q ss_pred -------C-CCCHHHHHHhhcCC---CeeEEEEeCCCCCC-Cccc---CHHHHHHHHHhCCCEEEEECCCCCC-------
Q 009523 272 -------D-PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFATP------- 329 (532)
Q Consensus 272 -------d-~~dle~Le~al~~~---~tklV~lesP~Npt-G~v~---dl~~I~~la~~~gi~lIvDet~a~~------- 329 (532)
+ ..|+++|+++|++. ++++|.++.++|.. |... ++++|.++|++||++||.|.+....
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~ 230 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKE 230 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcc
Confidence 1 12899999999752 35578888888887 5665 6799999999999999999994322
Q ss_pred ----Cccccc-------ccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhc-C----CCccHHHHHHHHH
Q 009523 330 ----LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G----GALNPNAAYLIIR 392 (532)
Q Consensus 330 ----~~~~~l-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~-G----~~~~~~~a~l~l~ 392 (532)
+..++. ...+|.++.|++|.++.+ .||+++.+ +++.++++.....+ | +.++.-....+..
T Consensus 231 re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAv 307 (460)
T PRK13237 231 REEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAI 307 (460)
T ss_pred cccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHh
Confidence 211221 124799999999999876 37877765 57888888764333 2 1222212112222
Q ss_pred hHH-HHH-HHHHHHHHHHHHHHHHHHhC
Q 009523 393 GMK-TLH-LRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 393 ~l~-tl~-~r~~~~~~~a~~la~~L~~~ 418 (532)
+++ ... ..+++..+++++|++.|.+.
T Consensus 308 gl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 308 GIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 333 222 34455667889999999875
No 301
>PRK07046 aminotransferase; Validated
Probab=99.56 E-value=4.8e-12 Score=136.51 Aligned_cols=215 Identities=19% Similarity=0.203 Sum_probs=145.7
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHH-HHHhc-----c---cCCc
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IETVL-----P---KMGI 266 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~-~~~~l-----~---~~Gv 266 (532)
..++...+|.++|.++.+.+.+.+++||++|+..+++... ...++|+.....|+|.... +.... . ..|+
T Consensus 112 ~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 112 LPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 4677778899999998887889999999999999987542 2346788888889885321 11100 0 0121
Q ss_pred ------EEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCC----CCCcc
Q 009523 267 ------TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA----TPLNQ 332 (532)
Q Consensus 267 ------~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a----~~~~~ 332 (532)
.+..++.+|++++++.+...++.+|++|......|.+.| ++++.++|+++|+++|+||++. .+-.+
T Consensus 192 ~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~ 271 (453)
T PRK07046 192 VHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT 271 (453)
T ss_pred CccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh
Confidence 234456679999999996557999999998877777766 7899999999999999999963 22112
Q ss_pred cccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-------hhcCCC--ccHHHHHHHHHhHHHHHH--HH
Q 009523 333 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGA--LNPNAAYLIIRGMKTLHL--RV 401 (532)
Q Consensus 333 ~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~--~~~~~a~l~l~~l~tl~~--r~ 401 (532)
.....-.|+++ +.|.++|+ ...|++++++++.+.+.... ..++++ .+|..+.+++..++.+.. ..
T Consensus 272 ~~~gv~PDi~t--~gK~lggG--~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~ 347 (453)
T PRK07046 272 RAHGLEPDFLV--VGKPIAGG--VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAY 347 (453)
T ss_pred HHhCCCcccee--ehhhhcCC--CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 22344578887 89999975 45788899999888775311 012222 367777666666665422 23
Q ss_pred HHHHHHHHHHHHHHH
Q 009523 402 QQQNSTALRMAKILE 416 (532)
Q Consensus 402 ~~~~~~a~~la~~L~ 416 (532)
++..+..+++.+.|+
T Consensus 348 ~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 348 AHMLALAARLAAGLR 362 (453)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344455555554
No 302
>PRK15029 arginine decarboxylase; Provisional
Probab=99.56 E-value=2.3e-13 Score=152.77 Aligned_cols=177 Identities=15% Similarity=0.139 Sum_probs=135.8
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.+.....+.++..|+++|++++.+..+|+ .+|.+++++++++||+|++++++|.+.+. .+...|+..+++.+.
T Consensus 202 ~p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~----al~L~ga~Pvyl~P~~~ 277 (755)
T PRK15029 202 DHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ----GLILTGAKPVYMVPSRN 277 (755)
T ss_pred CCCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeEEEeccccc
Confidence 45556788899999999999999999998 88999999999999999999999998764 344457777777532
Q ss_pred --------C-----HHHHHHhhcCC-Cee--------EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC--
Q 009523 275 --------D-----MEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-- 330 (532)
Q Consensus 275 --------d-----le~Le~al~~~-~tk--------lV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-- 330 (532)
+ ++.++++++.+ .++ ++++.+|+ ..|.+.|+++|+++||++|++|+|||+++..+
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 3 78899888543 234 89998888 78999999999999999999999999977643
Q ss_pred ----cc-ccc-----c-cCCc-EEEECCccccCCCCCcEEEEEEeChH--H--HHHHHHHhhhcCCC
Q 009523 331 ----NQ-KAL-----S-LGAD-LVLHSATKFIGGHNDVLAGSISGSGK--L--VTQIRNLHHVLGGA 381 (532)
Q Consensus 331 ----~~-~~l-----~-~gaD-ivv~S~sK~lgg~gd~~gG~lv~~~~--l--i~~l~~~~~~~G~~ 381 (532)
+. .++ . .|+| +++.|.||.+++.. .+.++-.+.. . .++++.....+.++
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qST 421 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATT 421 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCC
Confidence 21 233 3 6898 99999999999765 4555544322 2 24566655555543
No 303
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.56 E-value=1.8e-12 Score=149.85 Aligned_cols=288 Identities=15% Similarity=0.156 Sum_probs=175.7
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCH-HHHHHHHHHHh----ccCCC----EEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALEGAESTVIMASG-MSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~~i~~sSG-~~Ai~~al~al----l~~Gd----~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..++++.|+++.|.+.+-+..+| +++..+.+.++ .++|| +|++++..|+++... +...|++++.++.
T Consensus 544 i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~~ 619 (954)
T PRK05367 544 IDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVAC 619 (954)
T ss_pred HHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEECC
Confidence 45578999999999876666544 45554444333 25666 599999999886533 4556889888865
Q ss_pred C-----CHHHHHHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-C-cccccccCCcEEEE
Q 009523 274 A-----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-L-NQKALSLGADLVLH 344 (532)
Q Consensus 274 ~-----dle~Le~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~-~~~~l~~gaDivv~ 344 (532)
+ |+++|+++++++ ++.+|++.+|++..+...|+++|+++||++|+++++|.++... + ...+.+.|+|+++.
T Consensus 620 d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~ 699 (954)
T PRK05367 620 DENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHL 699 (954)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEe
Confidence 3 789999999653 5788889888865333478999999999999999999997532 2 23566889999999
Q ss_pred CCccccCCCC---CcEEEEEEeChHHHHHHHHHh----h---hcCCCc-cHH---------HHHHHHHhHHHHHHHHHHH
Q 009523 345 SATKFIGGHN---DVLAGSISGSGKLVTQIRNLH----H---VLGGAL-NPN---------AAYLIIRGMKTLHLRVQQQ 404 (532)
Q Consensus 345 S~sK~lgg~g---d~~gG~lv~~~~li~~l~~~~----~---~~G~~~-~~~---------~a~l~l~~l~tl~~r~~~~ 404 (532)
|+||+|+.+- +.-.|.+..++.+...+.... . ..|... ++. ..|+..-|.+.+....++.
T Consensus 700 s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~ 779 (954)
T PRK05367 700 NLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVA 779 (954)
T ss_pred cCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 9999976321 112567776654443332211 0 011111 111 1122223455566666667
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEE-EEcCC-HHHHHHHHHHcCCCceeecCCCcccc
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF-EVDGD-LTATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf-~l~g~-~~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
..++.++++.|+++.. +.|++-....- ...++.+ .++.. ......+.++|...|+....
T Consensus 780 ~~~A~Yl~~~L~~~~~---~~~~~~~~~~~----------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t------ 840 (954)
T PRK05367 780 ILNANYIAKRLKDHYP---VLYTGANGRVA----------HECILDLRPLKESTGITVDDIAKRLIDYGFHAPT------ 840 (954)
T ss_pred HHHHHHHHHHHHhhcC---ccccCCCCCcc----------cceEEEeecccccCCCCHHHHHHHHHHCCCeEee------
Confidence 7889999998877532 33332110001 1235555 23310 12234556665443432111
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
++ +.+ ++.+||++...+..+.++.|.++|..
T Consensus 841 ------~~-----------~pv-~~~l~i~ptE~~s~~elDr~~~al~~ 871 (954)
T PRK05367 841 ------MS-----------FPV-AGTLMVEPTESESKAELDRFCDAMIA 871 (954)
T ss_pred ------cC-----------Ccc-CCEEEEEeeecCCHHHHHHHHHHHHH
Confidence 00 001 56899999877666667777776653
No 304
>PLN02880 tyrosine decarboxylase
Probab=99.55 E-value=1.4e-12 Score=141.75 Aligned_cols=234 Identities=14% Similarity=0.138 Sum_probs=152.2
Q ss_pred CchhHHHHH----HHHHhhhCCCc---------EEEeCCHHHHHHHHHHHhcc-----C-----CC-EEEEcCCCCcchH
Q 009523 199 GNPTTVVVE----EKMSALEGAES---------TVIMASGMSASTVMLLALVP-----A-----GG-HIVTTTDCYRKTR 254 (532)
Q Consensus 199 ~~p~~~~Le----~~lA~l~ga~~---------~i~~sSG~~Ai~~al~all~-----~-----Gd-~VIv~~~~y~~t~ 254 (532)
..|...++| +.+++++|.++ .+++++|++|+..++.+... . .. .|++++..|.+..
T Consensus 116 ~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~ 195 (490)
T PLN02880 116 TSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQ 195 (490)
T ss_pred cCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHH
Confidence 344444444 56677777542 67888889998777654321 1 12 4566777887755
Q ss_pred HHHHHhcccCCc-----EEEEeCC-----CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCE
Q 009523 255 IFIETVLPKMGI-----TATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 319 (532)
Q Consensus 255 ~~~~~~l~~~Gv-----~v~~vd~-----~dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~ 319 (532)
. .+...|+ ..+.+|. .|+++|+++|++. .+-+|+....+-.+|.+-|+++|+++|+++|++
T Consensus 196 K----aa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iw 271 (490)
T PLN02880 196 K----ACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMW 271 (490)
T ss_pred H----HHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCE
Confidence 3 3334444 3333432 3889999988531 256677777778899999999999999999999
Q ss_pred EEEECCCCCCCcccc-----cc--cCCcEEEECCccccCCCCCcEEEEEEeCh--HHHHHHHH---Hh-h----------
Q 009523 320 VCIDGTFATPLNQKA-----LS--LGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRN---LH-H---------- 376 (532)
Q Consensus 320 lIvDet~a~~~~~~~-----l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~~---~~-~---------- 376 (532)
++||++|+......+ +. .++|.++.++||+++.+- ..|+++.++ .+.+.+.. +. .
T Consensus 272 lHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~--~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~ 349 (490)
T PLN02880 272 FHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNF--DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVD 349 (490)
T ss_pred EEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCc--cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCC
Confidence 999999887533221 11 368999999999998775 357666553 22222211 00 0
Q ss_pred ------hcCCCccHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccE
Q 009523 377 ------VLGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGV 448 (532)
Q Consensus 377 ------~~G~~~~~~~a~l~l--~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~ 448 (532)
..|.....+..|..+ .|.+.+..++++..+.++++++.|++.|+++.+..|. .++
T Consensus 350 ~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~-----------------~~i 412 (490)
T PLN02880 350 YKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI-----------------FSL 412 (490)
T ss_pred hhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc-----------------eEE
Confidence 011112234455443 3667788888888899999999999988865444332 358
Q ss_pred EEEEEcC
Q 009523 449 VSFEVDG 455 (532)
Q Consensus 449 vsf~l~g 455 (532)
+.|.+++
T Consensus 413 v~Fr~~~ 419 (490)
T PLN02880 413 VCFRLVP 419 (490)
T ss_pred EEEEEeC
Confidence 8898864
No 305
>PRK07678 aminotransferase; Validated
Probab=99.55 E-value=2.3e-12 Score=139.02 Aligned_cols=294 Identities=15% Similarity=0.184 Sum_probs=178.0
Q ss_pred CCCchhHHHHHHHHHhhhCCC-cEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHh-------
Q 009523 197 RYGNPTTVVVEEKMSALEGAE-STVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV------- 260 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~------- 260 (532)
.+.++...+|.++|+++.+.. .+++++||++|+..+++.... +| .+||.....|++........
T Consensus 85 ~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 164 (451)
T PRK07678 85 TQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRK 164 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccc
Confidence 357788888999999988654 577779999999999875421 23 57888888888843211110
Q ss_pred --cccCCcEEEEeCCC--------------C---HHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 261 --LPKMGITATVIDPA--------------D---MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 261 --l~~~Gv~v~~vd~~--------------d---le~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
.....-.+..++.. | ++.+++.++ ..++.+|++|......|.+.+ ++++.++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 165 YKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred cccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 00000111222211 1 233566664 236999999998877777765 889999999
Q ss_pred hCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh----hhcCC--Cc
Q 009523 315 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--AL 382 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----~~~G~--~~ 382 (532)
+||+++|+||++... +.......-.|+++ ++|.++++. ...|.+++++++.+.+.... ..+++ ..
T Consensus 245 ~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~g 321 (451)
T PRK07678 245 KHGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGG 321 (451)
T ss_pred HcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCC-cceeEEEEcHHHHHHHhccCcccccccCCCCCc
Confidence 999999999995321 11222344579887 799999753 34677888888887765311 01222 24
Q ss_pred cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-
Q 009523 383 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG- 455 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g- 455 (532)
+|..+..++..++.+.. ..++..+..+++.+.|++ ++.+.. .+|.|.|+.+++..
T Consensus 322 np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~------------------vrg~Gl~~~i~~~~~ 383 (451)
T PRK07678 322 NPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGD------------------IRGKGLLVGIELVND 383 (451)
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EEeeceEEEEEEecC
Confidence 67777777777776643 223333444455554432 232222 25678899999842
Q ss_pred -------CHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHH
Q 009523 456 -------DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKAD 524 (532)
Q Consensus 456 -------~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~d 524 (532)
+...+.++...+...|+-+...+ |.. + -..+.|||+..+ ++++.+++.
T Consensus 384 ~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g-------~~v------~--------~~~~~lrl~Ppl~it~~eid~~~~~ 442 (451)
T PRK07678 384 KETKEPADNDKVASVVAACKEKGLIIGKNG-------DTV------A--------GYNNVLTLSPPLVISSEEIAFIVGT 442 (451)
T ss_pred CcccCcCchHHHHHHHHHHHHCCcEEeecC-------ccc------c--------CCCCEEEEECCCcCCHHHHHHHHHH
Confidence 12334566666655554332211 000 0 013679997655 556667777
Q ss_pred HHHHHhhC
Q 009523 525 VLQALHAI 532 (532)
Q Consensus 525 L~~AL~~l 532 (532)
|+++|+++
T Consensus 443 l~~~l~~~ 450 (451)
T PRK07678 443 LKTALERI 450 (451)
T ss_pred HHHHHHhc
Confidence 77777653
No 306
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=2.2e-12 Score=139.36 Aligned_cols=291 Identities=17% Similarity=0.189 Sum_probs=174.0
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchH-HHHHHh-c---c-
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-L---P- 262 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~-~~~~~~-l---~- 262 (532)
+..+++.++...+|.++|+++.+. +.+++++||++|+..+++... ....+||+-...|++.. ..+... . .
T Consensus 105 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 184 (459)
T PRK06082 105 FSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQ 184 (459)
T ss_pred CccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCccccc
Confidence 334567889999999999999864 467888999999999987442 23367888888888743 111100 0 0
Q ss_pred cCC---cEEEEeC--------CCC--------HHHHHHhhcC-CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCE
Q 009523 263 KMG---ITATVID--------PAD--------MEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAI 319 (532)
Q Consensus 263 ~~G---v~v~~vd--------~~d--------le~Le~al~~-~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~ 319 (532)
.++ -.+..++ ..+ ++.+++.++. .++.+|++|...+..+.+.| +++|.++|++||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~l 264 (459)
T PRK06082 185 GMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVL 264 (459)
T ss_pred CCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 000 0112222 111 3557777752 26899999998876444555 88999999999999
Q ss_pred EEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009523 320 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 393 (532)
Q Consensus 320 lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~ 393 (532)
+|+||++... +.......-.|+++ ++|.++++. ...|.+++++++...............+|..+..++..
T Consensus 265 lI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~-~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 341 (459)
T PRK06082 265 LIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGL-VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALAT 341 (459)
T ss_pred EEEechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 9999995431 11223344578887 899999753 23566777776654332110111223467777777777
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-------HHH
Q 009523 394 MKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-------TAT 460 (532)
Q Consensus 394 l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-------~~~ 460 (532)
++.+.. ..++..+..+++.+.|++ +|.+. ..+|.|.|+.+++..+. +..
T Consensus 342 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~~ve~~~~~~~~~~~~~~~ 403 (459)
T PRK06082 342 IEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIG------------------DVRGIGLLWGVELVTDRHTKERAYDEA 403 (459)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCee------------------eeeeccceeEEEEccCccccCccHHHH
Confidence 766542 233344445555555543 22222 23567899999996321 223
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 531 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dli~dL~~AL~~ 531 (532)
..++..+...|+-+.. . ..+.|||+.. -++.+..++.++++|.+
T Consensus 404 ~~~~~~~~~~Gvl~~~----------~-----------------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 404 EAVLYRCLNNGLSFKV----------S-----------------QGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred HHHHHHHHhCCCEEEe----------c-----------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 4444444333322211 0 1356888744 46677777777777754
No 307
>PRK07482 hypothetical protein; Provisional
Probab=99.55 E-value=3.2e-12 Score=138.30 Aligned_cols=238 Identities=12% Similarity=0.070 Sum_probs=148.8
Q ss_pred CCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHH-H-------
Q 009523 196 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-I------- 257 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~~-~------- 257 (532)
..+.++...+|.++|+++.. .+.+++++||++|+..+++.... + ..+||.....|++.... +
T Consensus 89 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~ 168 (461)
T PRK07482 89 VGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSL 168 (461)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCch
Confidence 35678888899999999875 35788899999999999985421 2 25788888889884211 0
Q ss_pred -HHhcccCCcEEEEeCCC------------------CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHH
Q 009523 258 -ETVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSD 311 (532)
Q Consensus 258 -~~~l~~~Gv~v~~vd~~------------------dle~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~ 311 (532)
.......--.+..++.. +++++++.+. ..++.+|++|......|.+.+ +++|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~ 248 (461)
T PRK07482 169 FHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQA 248 (461)
T ss_pred hhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 00011000011112110 3567787774 236999999998877777754 789999
Q ss_pred HHHhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-----hhhcCC
Q 009523 312 LCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG 380 (532)
Q Consensus 312 la~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-----~~~~G~ 380 (532)
+|++||+++|+||++... +.......-+|+++ +.|.++|+- ...|.+++++++.+.+... ...++.
T Consensus 249 lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~ 325 (461)
T PRK07482 249 VLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAY-APLSGSIVGEKVWDVLEQGSDEHGAIGHGW 325 (461)
T ss_pred HHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCc-cccceeeecHHHHHHHhcccccCCccccCC
Confidence 999999999999995422 22333344579998 789998752 1346667777777766421 001222
Q ss_pred --CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEE
Q 009523 381 --ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 452 (532)
Q Consensus 381 --~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~ 452 (532)
..+|..+.+++..++.+.. ..++..+..+++.+.|+ ++|.+.. .+|.|.|+.++
T Consensus 326 T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~Glm~gie 387 (461)
T PRK07482 326 TYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGE------------------VRGVGMLAAVE 387 (461)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EeeceeEEEEE
Confidence 2467777777777765532 12233333444444443 2333322 35678899999
Q ss_pred Ec
Q 009523 453 VD 454 (532)
Q Consensus 453 l~ 454 (532)
+.
T Consensus 388 l~ 389 (461)
T PRK07482 388 FV 389 (461)
T ss_pred ec
Confidence 95
No 308
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.54 E-value=1.1e-12 Score=151.49 Aligned_cols=159 Identities=22% Similarity=0.302 Sum_probs=126.7
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccC--CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHH
Q 009523 203 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 277 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al-l~~--Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle 277 (532)
..++++.++++.|.+ ++-++.+++++.+.+++++ +++ +|+|++++..|+.+...++..++..|++++.++..+
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~-- 200 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK-- 200 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--
Confidence 344678999999985 4577788888877777765 445 489999999999998888777888999999988643
Q ss_pred HHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC-CCCCcccccccCCcEEEECCccc-----cC
Q 009523 278 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF-----IG 351 (532)
Q Consensus 278 ~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~-a~~~~~~~l~~gaDivv~S~sK~-----lg 351 (532)
++. .+ ++..+++..|+ .+|.+.|+++|+++||++|+++++|... +......|-++|+|+++.|.+|| +|
T Consensus 201 d~~---~~-~~~~vlvq~p~-~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~G 275 (954)
T PRK05367 201 ALD---HD-DVFGVLLQYPG-TSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFG 275 (954)
T ss_pred CCC---cc-cEEEEEEecCC-CCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCC
Confidence 111 22 57778787764 7999999999999999999999999865 33345578889999999999999 77
Q ss_pred CCCCcEEEEEEeChHHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQI 371 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l 371 (532)
|++ +|+++.++++.+.+
T Consensus 276 GP~---aGflavr~~~~r~l 292 (954)
T PRK05367 276 GPH---AAYFAVRDAYKRSM 292 (954)
T ss_pred CCC---EEEEEECHHHHhhC
Confidence 775 89999988776655
No 309
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.54 E-value=1.6e-12 Score=139.30 Aligned_cols=288 Identities=14% Similarity=0.117 Sum_probs=175.2
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------CCCEEEEcCCCCcchHHHHHHh-------
Q 009523 197 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AGGHIVTTTDCYRKTRIFIETV------- 260 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~-------~Gd~VIv~~~~y~~t~~~~~~~------- 260 (532)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.... ...+||.....|++........
T Consensus 82 ~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~ 161 (428)
T PRK07986 82 GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSM 161 (428)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhh
Confidence 45778888999999998753 5788889999999999874431 2357999999998832111000
Q ss_pred ---cccCCcEEEEeC-----------CCCHHHHHHhhcC--CCeeEEEEeCC-CCCCCccc-C---HHHHHHHHHhCCCE
Q 009523 261 ---LPKMGITATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGAI 319 (532)
Q Consensus 261 ---l~~~Gv~v~~vd-----------~~dle~Le~al~~--~~tklV~lesP-~NptG~v~-d---l~~I~~la~~~gi~ 319 (532)
.......+.+++ .+|++++++.++. .++.+|++|.. +...|.+. + +++|.++|++||++
T Consensus 162 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~l 241 (428)
T PRK07986 162 HSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGIL 241 (428)
T ss_pred hhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000001111221 2356778887752 25889999985 55455443 2 88999999999999
Q ss_pred EEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh---hhcC--CCccHHHHH
Q 009523 320 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLG--GALNPNAAY 388 (532)
Q Consensus 320 lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G--~~~~~~~a~ 388 (532)
+|+||++... +.........|+++ ++|.++|+- +..|++++++++.+.+.... ..++ ...+|..+.
T Consensus 242 LI~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~a 318 (428)
T PRK07986 242 LIADEIATGFGRTGKLFACEHAGIAPDILC--LGKALTGGT-MTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACA 318 (428)
T ss_pred EEEeccccCCccCCCeeeecccCCCCCEEE--echhhhCCc-ccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHH
Confidence 9999996321 11122333468886 899997541 34677778888888775411 0112 124577777
Q ss_pred HHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH
Q 009523 389 LIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA 466 (532)
Q Consensus 389 l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~ 466 (532)
.++..++.+.. .+++..+..+++.+.|++.. .+|.+ .+.+|.|.++.+++... .....+.+.
T Consensus 319 aa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~-----~~~~i----------~~vRg~Gl~~~ve~~~~-~~~~~~~~~ 382 (428)
T PRK07986 319 VANASLSLLESGDWQQQVAAIEAQLREELAPLR-----DAPMV----------ADVRVLGAIGVVETTRP-VNMAALQRF 382 (428)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-----cCCCE----------EeEeccceEEEEEeCCc-ccHHHHHHH
Confidence 77767766542 23444455555555555421 12221 12356788999999643 234456666
Q ss_pred cCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHhh
Q 009523 467 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQALHA 531 (532)
Q Consensus 467 L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv----G~ed~~dli~dL~~AL~~ 531 (532)
+...++.+... .+.|||.- ..++.+.+++.|+++|+.
T Consensus 383 l~~~Gl~~~~~----------------------------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 383 FVEQGVWIRPF----------------------------GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHCCcEEEec----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 65445433211 13566643 446777778888887753
No 310
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.54 E-value=7.6e-12 Score=134.27 Aligned_cols=216 Identities=19% Similarity=0.247 Sum_probs=144.8
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc--c--------cC
Q 009523 198 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL--P--------KM 264 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g-a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l--~--------~~ 264 (532)
+.++...+|.++|.++.. .+.+.+++||++|+..+++... ....+||.-...|++........- . ..
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 567778888899988764 4678889999999999987442 234678888888888432211110 0 01
Q ss_pred C------cEEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC---
Q 009523 265 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 329 (532)
Q Consensus 265 G------v~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~--- 329 (532)
| -.+..++..|++.+++.+++ .++.+|++|...+..|.+.| +++|.++|+++|+++|+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~ 249 (428)
T PRK12389 170 GVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM 249 (428)
T ss_pred CCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 1 13444566789999988853 25899999999888898888 999999999999999999996532
Q ss_pred Cc--ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-hhcCC--CccHHHHHHHHHhHHHHHH--HHH
Q 009523 330 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGG--ALNPNAAYLIIRGMKTLHL--RVQ 402 (532)
Q Consensus 330 ~~--~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~~~G~--~~~~~~a~l~l~~l~tl~~--r~~ 402 (532)
.. ......-.|+++ ++|.++++ ...|.+++++++++.+.... ..+++ ..+|..+.+++..++.+.. ..+
T Consensus 250 ~~~a~~~~gv~PDivt--~gK~lggG--~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~ 325 (428)
T PRK12389 250 YGGAQDLLGVEPDLTA--LGKIIGGG--LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYE 325 (428)
T ss_pred cchhhHHhCCCCCeee--echhhcCC--CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHH
Confidence 11 122334568875 89999864 34566788888888774211 11222 3467777777777766532 233
Q ss_pred HHHHHHHHHHHHHHh
Q 009523 403 QQNSTALRMAKILEA 417 (532)
Q Consensus 403 ~~~~~a~~la~~L~~ 417 (532)
+..+..+++.+.|++
T Consensus 326 ~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 326 KLDRLGAMLEEGILE 340 (428)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444455555555543
No 311
>PLN02590 probable tyrosine decarboxylase
Probab=99.53 E-value=5.6e-12 Score=137.77 Aligned_cols=254 Identities=15% Similarity=0.171 Sum_probs=164.1
Q ss_pred CCCCCCCchhHHHHH----HHHHhhhCCCc---------EEEeCCHHHHHHHHHHHhcc-----------CCCEEEEcCC
Q 009523 193 FEYGRYGNPTTVVVE----EKMSALEGAES---------TVIMASGMSASTVMLLALVP-----------AGGHIVTTTD 248 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le----~~lA~l~ga~~---------~i~~sSG~~Ai~~al~all~-----------~Gd~VIv~~~ 248 (532)
..++....|...++| +.|++++|.++ .+++++|++|+..++.+... +.-.|++++.
T Consensus 158 ~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~ 237 (539)
T PLN02590 158 VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ 237 (539)
T ss_pred ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC
Confidence 445555666666666 55666666532 68889999998777654311 1114556777
Q ss_pred CCcchHHHHHHhcccCCc-----EEEEeCC-----CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHH
Q 009523 249 CYRKTRIFIETVLPKMGI-----TATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLC 313 (532)
Q Consensus 249 ~y~~t~~~~~~~l~~~Gv-----~v~~vd~-----~dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la 313 (532)
.|.+... .+...|+ ..+.+|. .|+++|+++|++. .+-+|+....+-.+|.+-|+++|+++|
T Consensus 238 aH~Sv~K----Aa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~ 313 (539)
T PLN02590 238 THSSFRK----ACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIA 313 (539)
T ss_pred chHHHHH----HHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHH
Confidence 8877543 3333343 3333441 3899999998542 245677777778899999999999999
Q ss_pred HhCCCEEEEECCCCCCCcccc----ccc---CCcEEEECCccccCCCCCcEEEEEEeCh--HHHHHHHH---Hh------
Q 009523 314 HKKGAIVCIDGTFATPLNQKA----LSL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRN---LH------ 375 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~~~~~~----l~~---gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~~---~~------ 375 (532)
++||++++||++|+......+ +.. .+|-+..++||++.-+-+ .|++..++ .+.+.+.. +.
T Consensus 314 ~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 314 KKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred HHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999887543222 122 479999999999987653 56665543 23332211 11
Q ss_pred -----------hhcCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhc
Q 009523 376 -----------HVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM 442 (532)
Q Consensus 376 -----------~~~G~~~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~ 442 (532)
..++-....+..|+.++ |.+.+..++++..+.++++.+.+++.|.++-+..|.+
T Consensus 392 ~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l------------- 458 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYF------------- 458 (539)
T ss_pred cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCce-------------
Confidence 01111223455666655 5567888899999999999999999988765554432
Q ss_pred CCcccEEEEEEcC---CH----HHHHHHHHHcCC
Q 009523 443 TGFGGVVSFEVDG---DL----TATIKFIDALKI 469 (532)
Q Consensus 443 ~g~G~~vsf~l~g---~~----~~~~~~l~~L~~ 469 (532)
++|.|.+.+ +. ....++++++..
T Consensus 459 ----~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~ 488 (539)
T PLN02590 459 ----SLVCFRLAPVDGDEDQCNERNRELLAAVNS 488 (539)
T ss_pred ----EEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 478888763 11 223456666654
No 312
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=2.2e-12 Score=138.30 Aligned_cols=287 Identities=13% Similarity=0.151 Sum_probs=176.5
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchH-HHHHH------
Q 009523 197 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTR-IFIET------ 259 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~-~~~~~------ 259 (532)
.+.++...+|.++|+++.. .+.+++++||++|+..+++.... +| .+||.....|++.. ..+..
T Consensus 83 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 162 (429)
T PRK06173 83 GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162 (429)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchh
Confidence 4567888889999999874 36788899999999999875431 33 57888888888832 11100
Q ss_pred hcccCC---cEEEEeCC-----------CCHHHHHHhhc--CCCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCCC
Q 009523 260 VLPKMG---ITATVIDP-----------ADMEGLEAALN--NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGA 318 (532)
Q Consensus 260 ~l~~~G---v~v~~vd~-----------~dle~Le~al~--~~~tklV~lesP-~NptG~v~d----l~~I~~la~~~gi 318 (532)
.-..++ ..+.+++. .+++.|++.+. ..++.+|++|.. .+..|.+.+ +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 163 MHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred hhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 000000 01122221 13566777774 236999999985 766676644 7899999999999
Q ss_pred EEEEECCCCCCCc-------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh---hhcCC--CccHHH
Q 009523 319 IVCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNA 386 (532)
Q Consensus 319 ~lIvDet~a~~~~-------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~--~~~~~~ 386 (532)
++|+||++ +++. ........||++ ++|.++|+- +..+.+++++++.+.+.... ..++. ..+|..
T Consensus 243 llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 243 LLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTGGY-LTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLA 318 (429)
T ss_pred eEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhCCc-cccceEEecHHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 99999996 3221 222333468887 899997542 34677778888887764210 11222 246777
Q ss_pred HHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHH
Q 009523 387 AYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 464 (532)
Q Consensus 387 a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l 464 (532)
+..++..++.+.. ..++..++.+++.+.|++.. .+|.+ ...+|.|.|+.+++... .....+.
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~-----~~~~v----------~~vRg~Gl~~~iel~~~-~~~~~i~ 382 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAA-----EFDSV----------AEVRVLGAIGVVEMKEP-VNMATLQ 382 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-----cCCCe----------eeeeccceEEEEEeCCc-ccHHHHH
Confidence 7777777776542 23444455556666665321 12211 11245788999999643 2345566
Q ss_pred HHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009523 465 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 465 ~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS----vG~ed~~dli~dL~~AL~~ 531 (532)
+.+...++-+...+ +.|||. +..++.+.+++.|+++|.+
T Consensus 383 ~~l~e~Gi~v~~~g----------------------------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 383 PRFVEHGIWVRPFG----------------------------KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHCCeEEEecC----------------------------CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 66655454443211 345554 4446778888888888864
No 313
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=3e-12 Score=138.17 Aligned_cols=289 Identities=14% Similarity=0.158 Sum_probs=175.3
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHHHHHh------
Q 009523 197 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETV------ 260 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all-------~~-Gd~VIv~~~~y~~t~~~~~~~------ 260 (532)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... .+ ..+||.....|++.......+
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~ 172 (453)
T PRK06943 93 GCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALF 172 (453)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhh
Confidence 45678888899999998764 468888999999999988542 12 357999999998843111000
Q ss_pred ---cccCCcEEEEeCC-----------------CCHHHHHHhhcC--CCeeEEEEeC-CCCCCCcccC----HHHHHHHH
Q 009523 261 ---LPKMGITATVIDP-----------------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLC 313 (532)
Q Consensus 261 ---l~~~Gv~v~~vd~-----------------~dle~Le~al~~--~~tklV~les-P~NptG~v~d----l~~I~~la 313 (532)
....-..+..++. .+++++++.++. .++.+|++|. +....|.+.+ +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 0000001112211 124677777752 3699999998 4766677654 78999999
Q ss_pred HhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH----hhhcCCC--
Q 009523 314 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGA-- 381 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~G~~-- 381 (532)
++||+++|.||++... +..+....-.|+++ +.|.++|+- ...|.+++++++.+.+... ....+.+
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISGGY-LPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhccCc-ccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 9999999999995321 11233344579998 789998642 2467778888888766421 0012222
Q ss_pred ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---
Q 009523 382 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--- 456 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~--- 456 (532)
-+|..+..++..++.+.. .+++..+..+++.+.|++. . .+|.+ .+.+|.|.|+.+++..+
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l---~--~~~~v----------~~vrG~Gl~~gvel~~~~~~ 394 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPL---A--AHPQV----------RHLRQRGTIFAFDVALDGDA 394 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH---h--cCCCE----------EeEeccccEEEEEEccCCCc
Confidence 367777777777766542 1233334444555555432 0 12222 12367889999999622
Q ss_pred -HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009523 457 -LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 457 -~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS----vG~ed~~dli~dL~~AL~~ 531 (532)
.....++...+...++-+.. ..+.+||+ +..++.+.+++.|+++|++
T Consensus 395 ~~~~~~~i~~~~~~~Gll~~~----------------------------~g~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 395 ARTFSRRFFEAALERELLLRP----------------------------IGTTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred chHHHHHHHHHHHHCCcEEEe----------------------------cCCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 12244555555443432211 02357776 3446677778888887764
No 314
>PRK06541 hypothetical protein; Provisional
Probab=99.53 E-value=6.5e-12 Score=135.81 Aligned_cols=240 Identities=14% Similarity=0.171 Sum_probs=151.9
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHHh------
Q 009523 197 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV------ 260 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~--------~Gd~VIv~~~~y~~t~~~~~~~------ 260 (532)
.+.++...+|.++|+++... +.+++++||++|+..+++.... ...+||.-...|++........
T Consensus 91 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 170 (460)
T PRK06541 91 SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAF 170 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhh
Confidence 46678888899999998753 5788899999999999874321 1367888888888843211111
Q ss_pred ---cccCCcEEEEeCC----------CC--------HHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009523 261 ---LPKMGITATVIDP----------AD--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 312 (532)
Q Consensus 261 ---l~~~Gv~v~~vd~----------~d--------le~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~l 312 (532)
....-..+..++. ++ ++.+++.++ ..++.+|++|...++.|.+.+ +++|.++
T Consensus 171 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~l 250 (460)
T PRK06541 171 KAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREI 250 (460)
T ss_pred ccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 0000011122221 12 356777775 236889999988999999988 9999999
Q ss_pred HHhCCCEEEEECCCCCC-C-----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcC--CCc
Q 009523 313 CHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLG--GAL 382 (532)
Q Consensus 313 a~~~gi~lIvDet~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G--~~~ 382 (532)
|++||+++|+||++... - .........|+++ ++|.++++ -...|++++++++++.+..... .++ ...
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G-~~pigav~~~~~i~~~~~~~~~~~~~~~T~~g 327 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSG-YSPLGAMIASDRLFEPFLDGPTMFLHGYTFGG 327 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCC-ccceeEEEEcHHHHHHhhcCCCccccCCCCCC
Confidence 99999999999996321 1 1222233468886 89999853 2236777888888877653211 112 224
Q ss_pred cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 383 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
+|..+..++..++.+.. ..++..+..+++.+.|++... +|.+ ...+|.|.|+.+++.
T Consensus 328 np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-----~~~v----------~~vrg~Gl~~~ie~~ 386 (460)
T PRK06541 328 HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-----LPIV----------GDVRGDGYFYGIELV 386 (460)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-----CCCe----------EEEEecceEEEEEEe
Confidence 56777777766666532 234444556666666655311 1211 123567889999984
No 315
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=2.9e-12 Score=137.13 Aligned_cols=286 Identities=14% Similarity=0.117 Sum_probs=169.5
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHhcc----
Q 009523 197 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP---- 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~l~---- 262 (532)
.+.++...+|.++|+++.+ .+.+.+++||++|+..+++.... +| .+|+.....|++..........
T Consensus 79 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~ 158 (422)
T PRK05630 79 GLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGG 158 (422)
T ss_pred CcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCccc
Confidence 3567778889999999874 36788999999999999874321 23 5788889888884211111100
Q ss_pred ---cCC---cEEEEeCCC--------C----HHHHHHhhcCCCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCCCE
Q 009523 263 ---KMG---ITATVIDPA--------D----MEGLEAALNNNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAI 319 (532)
Q Consensus 263 ---~~G---v~v~~vd~~--------d----le~Le~al~~~~tklV~lesP-~NptG~v~d----l~~I~~la~~~gi~ 319 (532)
.++ ..+.+++.. + .+.+++.+.+ ++.+|++|.. ....|.+.+ +++|.++|++||++
T Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~l 237 (422)
T PRK05630 159 MHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDIL 237 (422)
T ss_pred ccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 011222211 1 2455666655 6999999985 666676553 78999999999999
Q ss_pred EEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh----hhcCC--CccHHHH
Q 009523 320 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--ALNPNAA 387 (532)
Q Consensus 320 lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----~~~G~--~~~~~~a 387 (532)
+|+||++... +.......-.||++ ++|.++|+- ..+|++++++++.+.+.... ..++. ..+|..+
T Consensus 238 lI~DEv~tG~GrtG~~~a~~~~gv~PDi~t--~gK~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 238 LIADEIATGFGRTGELFATLAAGVTPDIMC--VGKALTGGF-MSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLAC 314 (422)
T ss_pred EEEecceeCCCcCchhhHHHhcCCCCCeee--eechhhcCc-cccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHH
Confidence 9999996321 11122233467885 899997531 24678888888887764210 01122 2467777
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009523 388 YLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 465 (532)
Q Consensus 388 ~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~ 465 (532)
..++..++.+.. ..++..+..+++.+.|+.. . .+|.+ ...+|.|.|+.+++... .....+.+
T Consensus 315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l---~--~~~~v----------~~vRg~Gl~~~ie~~~~-~~~~~~~~ 378 (422)
T PRK05630 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPL---A--HLPGV----------ADVRVLGAIGVVEMEQP-VDMEEATQ 378 (422)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHh---h--cCCCe----------eeeeccccEEEEEECCc-ccHHHHHH
Confidence 766666666542 2233334445555544421 1 12221 12357799999999642 22345555
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHh
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALH 530 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dli~dL~~AL~ 530 (532)
.+...++-+... .+.|||... .++.+++++.|+++|.
T Consensus 379 ~~~~~Gl~~~~~----------------------------g~~l~~~PpL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 379 AAVDHGVWLRPF----------------------------GRLVYVMPPYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred HHHHCCeEEEec----------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHh
Confidence 554444332211 135666554 3566777777777765
No 316
>PRK06062 hypothetical protein; Provisional
Probab=99.52 E-value=7.5e-12 Score=135.07 Aligned_cols=203 Identities=12% Similarity=0.107 Sum_probs=133.8
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc-----c-
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----P- 262 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l-----~- 262 (532)
+....+.++...+|.++|+++... +.+.+++||++|+..+++... ....+||.....|++........- .
T Consensus 87 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~ 166 (451)
T PRK06062 87 TVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWP 166 (451)
T ss_pred CcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCccccc
Confidence 334467788889999999998753 578889999999999987542 233578888888888432111110 0
Q ss_pred ----cCCcEEEEeC---------CCC-------HHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHHHHHHHh
Q 009523 263 ----KMGITATVID---------PAD-------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 315 (532)
Q Consensus 263 ----~~Gv~v~~vd---------~~d-------le~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I~~la~~ 315 (532)
..|+.....+ .+| ++++++.++. .++.+|++|......|.+.| +++|.++|++
T Consensus 167 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~ 246 (451)
T PRK06062 167 NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDR 246 (451)
T ss_pred CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 0122111111 012 5677877742 36899999999888888888 9999999999
Q ss_pred CCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcC--CCccHHHH
Q 009523 316 KGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GALNPNAA 387 (532)
Q Consensus 316 ~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G--~~~~~~~a 387 (532)
||+++|+||++... +.........|+++ ++|.++++- +..|.+++++++.+.+.......+ ...+|..+
T Consensus 247 ~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~ 323 (451)
T PRK06062 247 HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNSGY-VPLGGVAISEAIAATFADRPYPGGLTYSGHPLAC 323 (451)
T ss_pred cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeee--echhhhcCC-cCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHH
Confidence 99999999996532 11222334578776 899999642 235667777788877653111122 12357777
Q ss_pred HHHHHhHHHHH
Q 009523 388 YLIIRGMKTLH 398 (532)
Q Consensus 388 ~l~l~~l~tl~ 398 (532)
..++..++.+.
T Consensus 324 Aaa~a~L~~l~ 334 (451)
T PRK06062 324 AAAVATINAME 334 (451)
T ss_pred HHHHHHHHHHH
Confidence 77777777654
No 317
>PRK07481 hypothetical protein; Provisional
Probab=99.52 E-value=8.7e-12 Score=134.55 Aligned_cols=289 Identities=13% Similarity=0.115 Sum_probs=171.6
Q ss_pred CCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHhc-----
Q 009523 198 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL----- 261 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g---a~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~l----- 261 (532)
+.++...+|.++|+++.+ .+.+.+++||++|+..+++.... +| .+||.....|++.......+-
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 467888899999999874 35688889999999999875421 23 578888988988431110100
Q ss_pred ----c--cCCcEEEEeC------C--CCHHH--------HHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009523 262 ----P--KMGITATVID------P--ADMEG--------LEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 312 (532)
Q Consensus 262 ----~--~~Gv~v~~vd------~--~dle~--------Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~l 312 (532)
. ..|+.....+ . .|+++ +++++. ..++.+|++|......|.+.+ +++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 0 0122211111 1 14333 344442 236999999999877787765 8899999
Q ss_pred HHhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-----hhcCCC
Q 009523 313 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGA 381 (532)
Q Consensus 313 a~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~~ 381 (532)
|++||+++|.||++... +.......-.||++ ++|.++++. +..|++++++++.+.+.... ..++.+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 319 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGY-VPLGATMVNARIADAFEANADFGGAIMHGYT 319 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCC-cCceEEEEcHHHHHHHhccCccccccccCCC
Confidence 99999999999995421 11233344578988 789998642 23577788888887765311 112322
Q ss_pred --ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-
Q 009523 382 --LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD- 456 (532)
Q Consensus 382 --~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~- 456 (532)
.+|..+..++..++.+.. ..++..+..+++.+.|++... .+|. ..+.+|.|.|+.+++..+
T Consensus 320 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~----------i~~vrG~Glm~gi~l~~~~ 385 (449)
T PRK07481 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKE----RFEL----------VGDVRGKGLMLALDLVADK 385 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh----cCCC----------eEEEeecceEEEEEecccc
Confidence 367777776666665532 223333444455555543210 0111 012356788999998532
Q ss_pred ---------HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHH
Q 009523 457 ---------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKA 523 (532)
Q Consensus 457 ---------~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv----G~ed~~dli~ 523 (532)
......+...+...++-+... .+.+||+- ..++.+.+++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------------------------g~~i~l~Ppl~it~~eid~~~~ 437 (449)
T PRK07481 386 ATREPIDPSKGYANAVADVARENGVLVRPS----------------------------GTKIILSPPLVIQREDVDRIVD 437 (449)
T ss_pred cccCCCCchhHHHHHHHHHHHhCCeEEEec----------------------------CCEEEEECCCCCCHHHHHHHHH
Confidence 122344555544344332211 12466663 3466777788
Q ss_pred HHHHHHhh
Q 009523 524 DVLQALHA 531 (532)
Q Consensus 524 dL~~AL~~ 531 (532)
.|+++|++
T Consensus 438 ~l~~~l~~ 445 (449)
T PRK07481 438 ALDAGLSA 445 (449)
T ss_pred HHHHHHHh
Confidence 88888765
No 318
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.51 E-value=1.3e-11 Score=133.46 Aligned_cols=287 Identities=14% Similarity=0.141 Sum_probs=168.7
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcc-----c--C
Q 009523 197 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----K--M 264 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~-----~--~ 264 (532)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+||.....|+|........-. + +
T Consensus 93 ~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 172 (451)
T PRK06918 93 VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGF 172 (451)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccC
Confidence 44578888899999998753 468888999999999987442 2335788888888885322111100 0 0
Q ss_pred C---cEEEEeCCCC-----------------HHHHHHhh----cCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009523 265 G---ITATVIDPAD-----------------MEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 316 (532)
Q Consensus 265 G---v~v~~vd~~d-----------------le~Le~al----~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~ 316 (532)
+ ..+..++..+ ++.+++.+ ..+++.+|++|......|.+.+ +++|.++|++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~ 252 (451)
T PRK06918 173 GPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH 252 (451)
T ss_pred CCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc
Confidence 1 1122222110 12344333 2336899999887766676554 78999999999
Q ss_pred CCEEEEECCCCCCCc------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHH
Q 009523 317 GAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 390 (532)
Q Consensus 317 gi~lIvDet~a~~~~------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~ 390 (532)
|+++|+||++..... ...+..-.|++ |++|.++++ ...|++++++++++.+...........++..+.++
T Consensus 253 gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~G--~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa 328 (451)
T PRK06918 253 GILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGAG--VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAA 328 (451)
T ss_pred CCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcCC--CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHH
Confidence 999999999653211 11122226755 699999953 56888999988887765332222223466666665
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-------CH
Q 009523 391 IRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DL 457 (532)
Q Consensus 391 l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-------~~ 457 (532)
...++.+.. ..++..+..+++.+.|++ ++.+.. .+|.|.++.+++.. +.
T Consensus 329 ~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~------------------vrg~G~~~~~~~~~~~~~~~~~~ 390 (451)
T PRK06918 329 LAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGD------------------VRGLGAMCAFELVQDRKTKEPDK 390 (451)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCcee------------------eccceeEEEEEEccCCCcCCCcH
Confidence 555554421 112222333444444433 222211 13567888887731 22
Q ss_pred HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
.....+.+.+...++.+..++. ..+.|||++.+ ++.++.++.|.++|+
T Consensus 391 ~~~~~l~~~~~~~Gvlv~~~~~-------------------------~~~~lrl~p~l~~t~~~id~~l~~l~~~l~ 442 (451)
T PRK06918 391 TLTANICKEANKRGLLLLSAGT-------------------------YGNVIRVLMPLVITDEQLEEGLTIIEESLQ 442 (451)
T ss_pred HHHHHHHHHHHHCCeEEeecCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 3456677666655654433211 13679999865 345556666666664
No 319
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.51 E-value=1.3e-11 Score=133.11 Aligned_cols=234 Identities=13% Similarity=0.087 Sum_probs=140.9
Q ss_pred CCchhHHHHHHHHHhhhCC----CcEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcc----c--C
Q 009523 198 YGNPTTVVVEEKMSALEGA----ESTVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP----K--M 264 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga----~~~i~~-sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~----~--~ 264 (532)
+.++...+|.++|+++.+. ...+++ +||++|+..+++... ....+||+....|++.......... + +
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 5778888999999998753 244554 799999999987442 2335788888889885432211111 0 0
Q ss_pred C---cEEEEeCCCC-------------H----HHHHHhhc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHh
Q 009523 265 G---ITATVIDPAD-------------M----EGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 315 (532)
Q Consensus 265 G---v~v~~vd~~d-------------l----e~Le~al~-----~~~tklV~lesP~NptG~v~d----l~~I~~la~~ 315 (532)
+ ..+.+++..+ . +.+++.+. ..++.+|++|.+.+..|.+.+ +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0 1122222111 1 12334442 126899999998877776653 7899999999
Q ss_pred CCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHH
Q 009523 316 KGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 389 (532)
Q Consensus 316 ~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l 389 (532)
||+++|.||++... +.......-.|+++ ++|.+++ | ...|+++++++ ++.+...........+|..+..
T Consensus 239 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G-~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aa 313 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-G-LPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVT 313 (442)
T ss_pred cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-C-cccEEEEEchH-HhccCCCcCCCCCCcCHHHHHH
Confidence 99999999995432 11122334568888 8999997 4 45677777776 4433211111112246777777
Q ss_pred HHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 390 IIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 390 ~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
++..++.+.. -.++..+...++.+.|++ +|.+.. .+|.|.|+.+++.
T Consensus 314 a~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~Gl~~~ie~~ 366 (442)
T TIGR00709 314 GTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGN------------------VRGRGLMQGIMIV 366 (442)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEEc
Confidence 7777766532 122333344444444443 232222 3578899999995
No 320
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.51 E-value=8.8e-12 Score=134.21 Aligned_cols=283 Identities=13% Similarity=0.098 Sum_probs=170.7
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc-----c----
Q 009523 197 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----P---- 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g---a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l-----~---- 262 (532)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++... ...++|+.....|+|........- .
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 93 DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 4667888899999999875 2578888999999999987432 234678888888888432211110 0
Q ss_pred -cCCcEEEEeCC----------CC--------HHHHHH-hhc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 263 -KMGITATVIDP----------AD--------MEGLEA-ALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 263 -~~Gv~v~~vd~----------~d--------le~Le~-al~----~~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
...-.+..++. .+ ++.+++ .++ ..++.+|++|......|.+.| +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 00011222221 11 233555 222 236999999999888899888 999999999
Q ss_pred hCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC--ccHHH
Q 009523 315 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNA 386 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~~~~~ 386 (532)
+||+++|+||++... +.........|+++ ++|.++++ ...|++++++++.+.+.. ..+.+ .+|..
T Consensus 253 ~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~G--~p~gav~~~~~i~~~~~~---~~~~T~~g~p~~ 325 (441)
T PRK05769 253 KYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAGG--LPLGAVIGRAELMFLPPG---SHANTFGGNPVA 325 (441)
T ss_pred HcCCEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccCC--cccEEEEEehhhhhcCCC---CCCCCCCcCHHH
Confidence 999999999996531 11122223458886 78999854 457788888877643321 12222 25666
Q ss_pred HHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----
Q 009523 387 AYLIIRGMKTLHL-RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----- 456 (532)
Q Consensus 387 a~l~l~~l~tl~~-r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----- 456 (532)
+..++..++.+.. .+++..+..+++.+.|++ ++.+. ..+|.|.++.+++..+
T Consensus 326 ~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~------------------~vrg~G~~~~i~~~~~~~~~~ 387 (441)
T PRK05769 326 AAAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIG------------------DVRGLGLMIGVELVKDRKEPD 387 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeecceEEEEEEeccCCcccc
Confidence 6666666665542 223333444555555543 22211 2256788999999532
Q ss_pred HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 457 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 457 ~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
......+.+.+...++-+.. . ..+.|||+..+ ++.+.+++.|+++|.+
T Consensus 388 ~~~~~~~~~~~~~~Gil~~~----------~-----------------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 388 PKLRDKVLYEAFKRGLLLLG----------A-----------------GKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HHHHHHHHHHHHhCCcEEec----------C-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12344555555443433211 0 13568888765 4556666666666654
No 321
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.51 E-value=2.9e-12 Score=147.65 Aligned_cols=159 Identities=19% Similarity=0.263 Sum_probs=121.4
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccCC--CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHH
Q 009523 203 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 277 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al-l~~G--d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle 277 (532)
..+++..++++.|.+ ++-++.+++++.+++++++ +++| |+|++++..|+.+...+...++..|++++.++..+.+
T Consensus 150 l~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~ 229 (993)
T PLN02414 150 LLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD 229 (993)
T ss_pred HHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc
Confidence 455789999999974 5778888888888777666 4544 7899999999999888877788899999998764322
Q ss_pred HHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-Ccc-cccccCCcEEEECCcccc-----
Q 009523 278 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQ-KALSLGADLVLHSATKFI----- 350 (532)
Q Consensus 278 ~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~-~~l~~gaDivv~S~sK~l----- 350 (532)
...+ .+..+++..|+ .+|.+.|+++|+++||++|+++++ .+.... ... .|-++|+|+++.+.+||.
T Consensus 230 ----~~~~-~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 230 ----YSSG-DVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred ----cccC-ceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCC
Confidence 1222 46666676665 589999999999999999999999 443221 122 477899999999999998
Q ss_pred CCCCCcEEEEEEeChHHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQI 371 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l 371 (532)
||+. +|+++.++++.+.+
T Consensus 303 GGP~---aGflavr~~~~r~~ 320 (993)
T PLN02414 303 GGPH---AAFLATSQEYKRLM 320 (993)
T ss_pred CCCC---eeEEEECHHHHhhC
Confidence 4443 78999888765533
No 322
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.2e-13 Score=141.94 Aligned_cols=211 Identities=20% Similarity=0.241 Sum_probs=167.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.....++|+.+|++.|.+++++|+-|-..+.+.+.+++.||.-|+.....|.+.. .-++.-|..++....+|+.+|
T Consensus 181 ~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~L 256 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGL 256 (519)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHH
Confidence 3567889999999999999999999999999999999999999999888887643 345666888998999999999
Q ss_pred HHhhcCC------------CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc----------cccccc
Q 009523 280 EAALNNN------------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----------QKALSL 337 (532)
Q Consensus 280 e~al~~~------------~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~----------~~~l~~ 337 (532)
|+.|++. +.-+|++|.....-|.+.++.++.++++++..+++.||++..+.. ..+...
T Consensus 257 Er~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~ 336 (519)
T KOG1357|consen 257 ERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPE 336 (519)
T ss_pred HHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCch
Confidence 9988641 334788889999999999999999999999999999999654321 112234
Q ss_pred CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH--hhhcCCCccHHHHHHHHHhHHHH---------HHHHHHHHH
Q 009523 338 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 406 (532)
Q Consensus 338 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G~~~~~~~a~l~l~~l~tl---------~~r~~~~~~ 406 (532)
.+||+..+++|.+|+. ||++.+++++++.++.. ....+..++|..+...+.+++.+ .+++++..+
T Consensus 337 dvDImMGtftKSfga~----GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ 412 (519)
T KOG1357|consen 337 DVDIMMGTFTKSFGAA----GGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAE 412 (519)
T ss_pred hheeecceehhhcccc----cceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHh
Confidence 5789999999999965 69999999999988753 23456667777777767776654 356677778
Q ss_pred HHHHHHHHHHhC
Q 009523 407 TALRMAKILEAH 418 (532)
Q Consensus 407 ~a~~la~~L~~~ 418 (532)
|...+...|+..
T Consensus 413 ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 413 NSRYFRWELQKM 424 (519)
T ss_pred hhHHHHHhhhcC
Confidence 887777776654
No 323
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.50 E-value=4.2e-12 Score=138.70 Aligned_cols=203 Identities=17% Similarity=0.159 Sum_probs=132.8
Q ss_pred EEEeCCHHHHHHHHHHHh----cc----------------------CCCEEEEcCCCCcchHHHHHHhcccCCc---EEE
Q 009523 219 TVIMASGMSASTVMLLAL----VP----------------------AGGHIVTTTDCYRKTRIFIETVLPKMGI---TAT 269 (532)
Q Consensus 219 ~i~~sSG~~Ai~~al~al----l~----------------------~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv---~v~ 269 (532)
.+++++|++|+..++.+. ++ ++..|++++..|.+..... ...|+ .++
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa----~~lglg~~~v~ 237 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAA----DVLGIGRDNLI 237 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHH----HHcCCCcccEE
Confidence 678889999888776542 11 2357999999998865433 33344 455
Q ss_pred EeCC-----CCHHHHHHhhcC---CCeeEEEEe--CCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccc-----
Q 009523 270 VIDP-----ADMEGLEAALNN---NNVSLFFTE--SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----- 334 (532)
Q Consensus 270 ~vd~-----~dle~Le~al~~---~~tklV~le--sP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~----- 334 (532)
.++. .|+++|+++|++ .+++.+++. ..++.+|.+.|+++|+++|+++|++++||.+|+......+
T Consensus 238 ~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~ 317 (522)
T TIGR03799 238 AIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL 317 (522)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH
Confidence 4443 289999998852 134544443 5567899999999999999999999999999886533222
Q ss_pred c-c-cCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHH---Hhh-----------hcCCCcc-HHHHHHHHHhH--
Q 009523 335 L-S-LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRN---LHH-----------VLGGALN-PNAAYLIIRGM-- 394 (532)
Q Consensus 335 l-~-~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~---~~~-----------~~G~~~~-~~~a~l~l~~l-- 394 (532)
+ . .++|.++.|.||+++++-+ .|+++.+ +.+.+.+.. +.. .-|+... ....|.+++.+
T Consensus 318 l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~ 395 (522)
T TIGR03799 318 LKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR 395 (522)
T ss_pred hcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH
Confidence 1 2 2689999999997766642 5666554 455444332 100 0111111 22345554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009523 395 KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 427 (532)
Q Consensus 395 ~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~P 427 (532)
+.+...+++..+.++++.+.|++.|+++.+..|
T Consensus 396 ~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 396 KGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 345666777888999999999999887655444
No 324
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.50 E-value=9.7e-13 Score=146.49 Aligned_cols=176 Identities=16% Similarity=0.161 Sum_probs=132.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
+.....+.++..|+++|+++..++.+|+ .+|.+++++++++||.|++.+++|.+.+.. .+...|+..+++.+.
T Consensus 172 ~eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~~n~ 248 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETARNP 248 (720)
T ss_pred CChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeeccccc
Confidence 4455778899999999999999999998 889999999999999999999999986642 234457777776421
Q ss_pred -------C-----HHHHHHhhcCC--------C-eeEEEEeCCCCCCCcccCHHHHHHH-HHhCCCEEEEECCCCCCCcc
Q 009523 275 -------D-----MEGLEAALNNN--------N-VSLFFTESPTNPFLRCVDVKLVSDL-CHKKGAIVCIDGTFATPLNQ 332 (532)
Q Consensus 275 -------d-----le~Le~al~~~--------~-tklV~lesP~NptG~v~dl~~I~~l-a~~~gi~lIvDet~a~~~~~ 332 (532)
+ .+.|+++|+++ + .+++++.+|+ ..|.+.|+++|+++ +|.++ +|++||+|+..+.+
T Consensus 249 ~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F 326 (720)
T PRK13578 249 FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQF 326 (720)
T ss_pred cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhhcc
Confidence 3 45588888653 1 5899998887 78999999999998 68888 99999998765433
Q ss_pred cc---------cccCCc----EEEECCccccCCCCCcEEEEEEeChHHH---------HHHHHHhhhcCCC
Q 009523 333 KA---------LSLGAD----LVLHSATKFIGGHNDVLAGSISGSGKLV---------TQIRNLHHVLGGA 381 (532)
Q Consensus 333 ~~---------l~~gaD----ivv~S~sK~lgg~gd~~gG~lv~~~~li---------~~l~~~~~~~G~~ 381 (532)
.+ ++.|+| +++.|.||.+++.+ .+.++-.+...+ ++++.....+.++
T Consensus 327 ~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qST 395 (720)
T PRK13578 327 IPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHAST 395 (720)
T ss_pred CcccccCChhhhhcCCCCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCC
Confidence 22 467999 99999999999775 455554443222 4565555555443
No 325
>PLN02263 serine decarboxylase
Probab=99.49 E-value=2.1e-11 Score=130.45 Aligned_cols=229 Identities=16% Similarity=0.128 Sum_probs=157.2
Q ss_pred CCCCCCCC---chhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcc
Q 009523 192 SFEYGRYG---NPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLP 262 (532)
Q Consensus 192 ~~~Y~R~~---~p~~~~Le~~lA~l~ga~----~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~ 262 (532)
.+.++-|+ ...-.++-+.+++++|.+ ..+++++|++++..++.+.-. +...+++++..|.+.. ..+.
T Consensus 121 p~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~----KAa~ 196 (470)
T PLN02263 121 PFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAAR 196 (470)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH----HHHH
Confidence 45555442 223334557778888863 268899999999888776532 3447888999998755 4455
Q ss_pred cCCcEEEEeCCC-----CHHHHHHhhcCCC--eeEEEEeCCCCCCCcccCHHHHHHHHHhCCC-----EEEEECCCCCCC
Q 009523 263 KMGITATVIDPA-----DMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA-----IVCIDGTFATPL 330 (532)
Q Consensus 263 ~~Gv~v~~vd~~-----dle~Le~al~~~~--tklV~lesP~NptG~v~dl~~I~~la~~~gi-----~lIvDet~a~~~ 330 (532)
.+|++++.++.+ |+++|+++|.++. +-+|+....+-++|.+-|+++|.++|+++|+ +++||++++..+
T Consensus 197 llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 197 MYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred hcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 567777777643 8999999887532 5677777788899999999999999999997 999999987642
Q ss_pred c-c--c--c--cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH---h-----hhcCCCc--cHHHHHHHHH-
Q 009523 331 N-Q--K--A--LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H-----HVLGGAL--NPNAAYLIIR- 392 (532)
Q Consensus 331 ~-~--~--~--l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~---~-----~~~G~~~--~~~~a~l~l~- 392 (532)
. + . . ...++|-+..+.||+++.+- ..|+++.+++.++.+... . ...|+.. .+...|..++
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~--~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~ 354 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 354 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCc--CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH
Confidence 2 1 1 1 12248999999999998765 367777766554333211 0 1223322 2456676655
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009523 393 -GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 427 (532)
Q Consensus 393 -~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~P 427 (532)
|.+.+..++++..++++++.+.|++. ++..+.-|
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p 389 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNE 389 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCC
Confidence 55678888899999999999999887 34344333
No 326
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.49 E-value=1.8e-11 Score=132.47 Aligned_cols=285 Identities=13% Similarity=0.107 Sum_probs=168.0
Q ss_pred CCCchhHHHHHHHHHhhhCCC-----cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc----c--
Q 009523 197 RYGNPTTVVVEEKMSALEGAE-----STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL----P-- 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~-----~~i~~-sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l----~-- 262 (532)
.+.++...+|.++|.++...+ ..+++ +||++|+..+++... ....+||.....|++.......+- .
T Consensus 102 ~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 102 DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 456788888988898876432 35565 699999999987542 223578888888888432211110 0
Q ss_pred cCC---cEEEEeCCC-----------------CHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009523 263 KMG---ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLC 313 (532)
Q Consensus 263 ~~G---v~v~~vd~~-----------------dle~Le~al~~-----~~tklV~lesP~NptG~v~d----l~~I~~la 313 (532)
.++ ..+.+++.. +++.+++.+++ .++.+|++|......|.+.+ ++++.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 000 112233211 25677777753 15899999988876677665 78999999
Q ss_pred HhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC--ccHH
Q 009523 314 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPN 385 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~~~~ 385 (532)
++||+++|.||++... +.+.....-+||++ ++|.++|+ ...|++++++++ +.+... .++++ .+|.
T Consensus 262 ~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglggG--~PlsAv~~~~~~-~~~~~~--~~~~T~~gnpl 334 (464)
T PRK06938 262 EEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGGS--LPLAVVVYREWL-DTWQPG--AHAGTFRGNQM 334 (464)
T ss_pred HHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccCC--CceEEEeehhHh-hccCCC--CCCCCCCcCHH
Confidence 9999999999995432 12233344579998 78999864 456667777664 433211 12222 3577
Q ss_pred HHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---
Q 009523 386 AAYLIIRGMKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--- 456 (532)
Q Consensus 386 ~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~--- 456 (532)
.+.+++..++.+... +++..+..+++.+.|++ +|.+.. .+|.|.|+.+++..+
T Consensus 335 a~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------VrG~Glm~gie~~~~~~~ 396 (464)
T PRK06938 335 AMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGD------------------VRGRGLMLGVEIVDPQGE 396 (464)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEeccCccc
Confidence 777777677665321 12222333334444432 332222 256788999999532
Q ss_pred ----------HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHH
Q 009523 457 ----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLK 522 (532)
Q Consensus 457 ----------~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv----G~ed~~dli 522 (532)
......+...+...++-+..++ ...+.|||.. .-++.+.++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-------------------------~~~~~l~~~Ppl~it~~eid~~~ 451 (464)
T PRK06938 397 PDALGHPPANGELASLIQRECLRRGLILELGG-------------------------RHGSVVRFLPPLIITAEQIDEVA 451 (464)
T ss_pred ccccccCCccHHHHHHHHHHHHHCCeEEeecC-------------------------CCCCEEEEECCCccCHHHHHHHH
Confidence 1223445555444443332211 1135677763 346667777
Q ss_pred HHHHHHHhh
Q 009523 523 ADVLQALHA 531 (532)
Q Consensus 523 ~dL~~AL~~ 531 (532)
+.|+++|..
T Consensus 452 ~~l~~~l~~ 460 (464)
T PRK06938 452 EIFAEAVAA 460 (464)
T ss_pred HHHHHHHHH
Confidence 777777754
No 327
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=5.6e-12 Score=136.59 Aligned_cols=290 Identities=12% Similarity=0.113 Sum_probs=169.8
Q ss_pred CCCchhHHHHHHHHHhhhCC-------CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHHhc
Q 009523 197 RYGNPTTVVVEEKMSALEGA-------ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVL 261 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga-------~~~i~~sSG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~~~~~~l 261 (532)
.+.++...+|.++|+++... +.+++++||++|+..+++.... + ..+||.....|+|........-
T Consensus 103 ~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~ 182 (472)
T PRK08742 103 GFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVG 182 (472)
T ss_pred ccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhcc
Confidence 35677888899999987642 4688889999999999875421 2 2578888988988431111110
Q ss_pred ---------ccCCcEEEEeCCC-----------------CHHHHHHhhc--CCCeeEEEEeC-CCCCCCcccC----HHH
Q 009523 262 ---------PKMGITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKL 308 (532)
Q Consensus 262 ---------~~~Gv~v~~vd~~-----------------dle~Le~al~--~~~tklV~les-P~NptG~v~d----l~~ 308 (532)
...-..+.+++.. +++.+++.+. ..++.+|++|. ..+..|.+.+ +++
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~ 262 (472)
T PRK08742 183 DIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRR 262 (472)
T ss_pred CCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHH
Confidence 0000012222221 2466677764 23699999998 4666676554 789
Q ss_pred HHHHHHhCCCEEEEECCCCC----C--CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH----hhhc
Q 009523 309 VSDLCHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVL 378 (532)
Q Consensus 309 I~~la~~~gi~lIvDet~a~----~--~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~ 378 (532)
+.++|++||+++|.||++.. + +.......-.||++ +.|.++|+- ...|.+++++++.+.+... ....
T Consensus 263 lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG~-~Plaav~~~~ei~~~~~~~~~~~~~~h 339 (472)
T PRK08742 263 ARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGGF-LPLSAVLATQQLYDAFLDDSRERAFLH 339 (472)
T ss_pred HHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCCC-CCcceeeccHHHHHHhhccCccCccCc
Confidence 99999999999999999532 1 11333344579998 789998652 2356777888887766421 0112
Q ss_pred CCC--ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC-CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 379 GGA--LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 379 G~~--~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p-~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
+.+ .+|..+.+++..++.+.. +...++++++.++|++.- .+. .+|.+ ...+|.|.|+.|++..
T Consensus 340 ~~T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~~~~~~--~~~~i----------~dvRG~Gl~~giel~~ 405 (472)
T PRK08742 340 SHSYTGNPLACAAALATLDIFAD--DDVIARNQPTAARMTQLAAQIG--EHPHV----------ADVRQAGMVVAFELTR 405 (472)
T ss_pred CCCCCccHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHh--cCCCe----------eeEeccceEEEEEecc
Confidence 322 367777776666665532 122334444433333210 000 01211 1236788999999953
Q ss_pred CH----------HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHH
Q 009523 456 DL----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDL 521 (532)
Q Consensus 456 ~~----------~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dl 521 (532)
+. .....+.+.+...++-+.. ..+.|||.-. .++.+++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~----------------------------~g~vi~~~PpL~it~~ei~~~ 457 (472)
T PRK08742 406 GGNKRTPFPPAARVGLHAYRAALARGVVLRP----------------------------LGDVLYWMPPYCVDEAQLALL 457 (472)
T ss_pred CccccccCCchhHHHHHHHHHHHHCCeEEEe----------------------------cCCEEEEECCCCCCHHHHHHH
Confidence 21 1123444444333432211 0245666654 3667778
Q ss_pred HHHHHHHHhh
Q 009523 522 KADVLQALHA 531 (532)
Q Consensus 522 i~dL~~AL~~ 531 (532)
++.|+++|++
T Consensus 458 ~~~l~~~l~~ 467 (472)
T PRK08742 458 ADTTRHAIDE 467 (472)
T ss_pred HHHHHHHHHH
Confidence 8888888764
No 328
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=3.5e-11 Score=129.97 Aligned_cols=284 Identities=15% Similarity=0.123 Sum_probs=170.4
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc-----ccCC----
Q 009523 199 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKMG---- 265 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l-----~~~G---- 265 (532)
.++...+|.++|+++.+. +.+.+++||++|+..+++... ....+||.....|+|.......+. .+.+
T Consensus 94 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 173 (457)
T PRK05639 94 HSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPL 173 (457)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCC
Confidence 457777899999998754 568899999999999987542 234578888888888432111110 0011
Q ss_pred -cEEEEeCCC-------------CH--------HHHHHhh-----cCCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 266 -ITATVIDPA-------------DM--------EGLEAAL-----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 266 -v~v~~vd~~-------------dl--------e~Le~al-----~~~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
-.+.+++.. +. +.+++.+ ...++.+|++|......|.+.| +++|.++|+
T Consensus 174 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~ 253 (457)
T PRK05639 174 MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD 253 (457)
T ss_pred CCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 112333321 12 2355544 1336999999998877787665 789999999
Q ss_pred hCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHH
Q 009523 315 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY 388 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~ 388 (532)
+||+++|+||++... +.......-+|+++ ++|.++++ ...|++++++++.+.... ........+|..+.
T Consensus 254 ~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG--~pi~av~~~~~i~~~~~~-~~~~T~~g~p~~~a 328 (457)
T PRK05639 254 EHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASG--MGLSGVIGRKELMDLTSG-SALLTPAANPVISA 328 (457)
T ss_pred HcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCC--CcceeEEehHHHHhhcCC-CcccCCCcCHHHHH
Confidence 999999999996421 11222344578888 89999864 245778888888772211 11112234677766
Q ss_pred HHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----H
Q 009523 389 LIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----L 457 (532)
Q Consensus 389 l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-----~ 457 (532)
.++..++.+.. .+++..+..+++.+.|++ ++.+. +.+|.|.|+.+++..+ .
T Consensus 329 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~------------------~VrG~Gl~~gve~~~~~~~~~~ 390 (457)
T PRK05639 329 AAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIG------------------DVRGKGLMIGVEIVKENGKPDP 390 (457)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEE------------------eeccceeEEEEEEecCCCCCCH
Confidence 66666665532 123333444455555543 22222 2257888999998431 2
Q ss_pred HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
+....+.+.+...++-+... |...+.|||+..+ ++.+++++.|+++|+
T Consensus 391 ~~~~~~~~~~~~~Gv~~~~~-------------------------g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~ 442 (457)
T PRK05639 391 ELTGKICWRAFELGLILPSY-------------------------GMFGNVIRITPPLVITKEIAEKGLEIMERAIK 442 (457)
T ss_pred HHHHHHHHHHHhCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 23455665555445433211 1124678887765 455666666666654
No 329
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.49 E-value=4.2e-12 Score=124.62 Aligned_cols=259 Identities=20% Similarity=0.295 Sum_probs=172.6
Q ss_pred cCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcCCC-CcchHHHH------HH
Q 009523 190 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTTDC-YRKTRIFI------ET 259 (532)
Q Consensus 190 ~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~---~sSG~~Ai~~al~all~~Gd~VIv~~~~-y~~t~~~~------~~ 259 (532)
+.+|.|...+ ++.|++-.|+.+|++.+++ +-||+.||..+|..+++|||+++.-... |....+.+ ..
T Consensus 57 stGYGydD~G---RdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~g 133 (416)
T COG4100 57 STGYGYDDLG---RDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQG 133 (416)
T ss_pred CCCCCccccc---hhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcc
Confidence 4566665544 5678888999999987654 6799999999999999999998765433 33222111 01
Q ss_pred hcccCCcEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCC----CCCCCcccCHHHHHHHHHhC--CCEEEEECCCCC
Q 009523 260 VLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESP----TNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFAT 328 (532)
Q Consensus 260 ~l~~~Gv~v~~vd~~-----dle~Le~al~~~~tklV~lesP----~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~ 328 (532)
.++.+|+...-++.. |.+.++.++++ +||+|-+.-- .-|...+.+++++.++.++- ++++.|||+|+.
T Consensus 134 SL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 134 SLKDFGIKYKAVPLTADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred cHHHhCcceeecccccCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 355678888777643 89999999998 7999999543 24677788889999988874 799999999998
Q ss_pred CCc-ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH------hhhcCCCccHHHHHHHHHhHHHHHHHH
Q 009523 329 PLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL------HHVLGGALNPNAAYLIIRGMKTLHLRV 401 (532)
Q Consensus 329 ~~~-~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~------~~~~G~~~~~~~a~l~l~~l~tl~~r~ 401 (532)
++. ..|...|+|++..|+-|.-||+--..||++.++.++++...-. .+..|.++.. ...+.+++--.+.-.
T Consensus 213 FvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~Gat~~~--l~~myqGlFlAPhvv 290 (416)
T COG4100 213 FVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGGATLYS--LREMYQGLFLAPHVV 290 (416)
T ss_pred hhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccccccccHHH--HHHHHhhhccchHHH
Confidence 764 5788899999999999999887555689999999999875321 1122222221 112233333223333
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 469 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~ 469 (532)
.+..+-+...+.+|++. .+|. .|.+.- .+.--+-++++. +.+....|+.+++.
T Consensus 291 ~qa~Kga~fta~~le~l------g~~~---~P~~~~-----kRtDlIQavkf~-~~eKmIaFcqaiQ~ 343 (416)
T COG4100 291 SQAVKGAHFTARFLEKL------GFPV---NPKYDA-----KRTDLIQAVKFG-SKEKMIAFCQAIQA 343 (416)
T ss_pred HHHhhhhHHHHHHHHHc------CCCC---CCcccc-----cccchhhheecC-CHHHHHHHHHHHhh
Confidence 44445555566677654 2222 221110 011124467775 45777888888753
No 330
>PRK07480 putative aminotransferase; Validated
Probab=99.49 E-value=1.1e-11 Score=133.80 Aligned_cols=240 Identities=16% Similarity=0.197 Sum_probs=147.3
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHh------
Q 009523 197 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV------ 260 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~------ 260 (532)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.... +| .+||.....|++....-...
T Consensus 90 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~ 169 (456)
T PRK07480 90 KTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYM 169 (456)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhh
Confidence 45788889999999998853 5788999999999999875421 23 46888888888842110000
Q ss_pred cccCCc---EEEEeCCC---------------C--HHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009523 261 LPKMGI---TATVIDPA---------------D--MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 313 (532)
Q Consensus 261 l~~~Gv---~v~~vd~~---------------d--le~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la 313 (532)
-...+. .+..++.. + ++.|++.+. ..++.+|++|......|.+.+ +++|.++|
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc 249 (456)
T PRK07480 170 HEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRIC 249 (456)
T ss_pred hcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 000110 11222210 1 256655452 136899999999877788776 88999999
Q ss_pred HhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH-Hh-hhcCC--Ccc
Q 009523 314 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH-HVLGG--ALN 383 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-~~-~~~G~--~~~ 383 (532)
++||+++|+||++... +.......-.|+++ ++|.++++- ...|.+++++++.+.+.. .. ...+. ..+
T Consensus 250 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 250 RKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGY-IPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCC-ccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 9999999999995321 11223334568887 799998642 235667778888777631 11 11222 246
Q ss_pred HHHHHHHHHhHHHHHH--HHHHH-HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 384 PNAAYLIIRGMKTLHL--RVQQQ-NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 384 ~~~a~l~l~~l~tl~~--r~~~~-~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
|..+..++..|+.+.. .+++. .+..+++.+.|++.. .+|.+ .+.+|.|.|+.+++.
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~-----~~~~i----------~~vrG~Glm~gie~~ 385 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELA-----DHPLV----------GEVRGVGLVGAIELV 385 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhh-----cCCCe----------eeEEeecceEEEEEe
Confidence 7777777777766542 12222 233455555554321 12211 123578899999995
No 331
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.49 E-value=7.6e-12 Score=131.82 Aligned_cols=291 Identities=17% Similarity=0.172 Sum_probs=180.7
Q ss_pred CCCCCchhHHHHHHHHHhhhC-C--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchH---------
Q 009523 195 YGRYGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTR--------- 254 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~g-a--~~~i~~sSG~~Ai~~al~all-------~~G-d~VIv~~~~y~~t~--------- 254 (532)
++-...| ..+|.++|+++.+ . +.+++.+||++|++++++..+ +|. .++|.-...|++.-
T Consensus 82 ~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~ 160 (449)
T COG0161 82 GGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGP 160 (449)
T ss_pred cccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCc
Confidence 4445567 8899999999987 3 578888999999999997543 233 34888888998731
Q ss_pred -HHHHHhcccCCcEEEEeCC-----------------CCHHHHHHhhcC---CCeeEEEEeCCCCC-CCcccC----HHH
Q 009523 255 -IFIETVLPKMGITATVIDP-----------------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKL 308 (532)
Q Consensus 255 -~~~~~~l~~~Gv~v~~vd~-----------------~dle~Le~al~~---~~tklV~lesP~Np-tG~v~d----l~~ 308 (532)
..........-..+.+++. ...++|++.+.. +++.++++|....- .|.+.| +++
T Consensus 161 ~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 161 VALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHH
Confidence 1111111111111112211 114567777754 46899999998876 676665 889
Q ss_pred HHHHHHhCCCEEEEECCCC------CCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-h----hh
Q 009523 309 VSDLCHKKGAIVCIDGTFA------TPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H----HV 377 (532)
Q Consensus 309 I~~la~~~gi~lIvDet~a------~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-~----~~ 377 (532)
+.++|++|||++|.||+.. ..+.......-.||++ ++|.+.++.-. .|.++.++++.+.+..- . ..
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY~P-l~a~l~~~~I~~~~~~~~~~~f~HG 317 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGYLP-LSAVLTSDRIYEAFSDGDAGAFMHG 317 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccchh-hHhHhhhHHHHHHHhcccCCeeccC
Confidence 9999999999999999932 1222333344578988 88999877643 44555667777776542 1 11
Q ss_pred cCCCccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEE
Q 009523 378 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 451 (532)
Q Consensus 378 ~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf 451 (532)
+.-+-+|.+|..++..++.+.. .+++..+...++.+.|++ +|.|..| ++.|.|..+
T Consensus 318 ~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV------------------R~~Gli~~i 379 (449)
T COG0161 318 HTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDV------------------RGLGLIGAI 379 (449)
T ss_pred CccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEe------------------eccceEEEE
Confidence 2234578899888888776542 223333444455555543 2344333 556778889
Q ss_pred EEcCCHH--------HHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009523 452 EVDGDLT--------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 523 (532)
Q Consensus 452 ~l~g~~~--------~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~ 523 (532)
|+..+.. ...++.......|+-+...+. .+...|. +.+..|+.+++++
T Consensus 380 Elv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~-~i~~~PP-----------------------liit~~eid~l~~ 435 (449)
T COG0161 380 ELVADKATKTPFEARVGARVRAAALERGLLIRPLGD-VIYLMPP-----------------------LIITREEIDELVD 435 (449)
T ss_pred EEecccccccchhhhHHHHHHHHHHHCCeEEeecCC-EEEEcCC-----------------------ccCCHHHHHHHHH
Confidence 9864322 244555555445555553322 2222332 4455678889999
Q ss_pred HHHHHHhh
Q 009523 524 DVLQALHA 531 (532)
Q Consensus 524 dL~~AL~~ 531 (532)
.+.++|+.
T Consensus 436 ~l~~al~~ 443 (449)
T COG0161 436 ALREALDE 443 (449)
T ss_pred HHHHHHHH
Confidence 99988874
No 332
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.49 E-value=1.7e-11 Score=121.08 Aligned_cols=212 Identities=19% Similarity=0.211 Sum_probs=152.7
Q ss_pred HHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-----C
Q 009523 204 VVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----D 275 (532)
Q Consensus 204 ~~Le~~lA~l~ga~--~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-----d 275 (532)
+++.+-+...+... . -++-++|..+.+.++..++.|||.|++-...-.+.+ +...++++|++|..++.+ .
T Consensus 53 ~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~~~ 130 (385)
T KOG2862|consen 53 DEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQAVP 130 (385)
T ss_pred HHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccCcc
Confidence 34445555555532 2 345578889999999999999999887655433322 335688999999988643 6
Q ss_pred HHHHHHhhcCCCeeEEEEeCCCCCCCcccC-HHHHHHHHHhCCCEEEEECCCCC-CCcccccccCCcEEEECCccccCCC
Q 009523 276 MEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGH 353 (532)
Q Consensus 276 le~Le~al~~~~tklV~lesP~NptG~v~d-l~~I~~la~~~gi~lIvDet~a~-~~~~~~l~~gaDivv~S~sK~lgg~ 353 (532)
++.+++.+.++++++|+++.--.-||.++| ++.+-++||+|+++++||.+..- ...+...++|+|+......|.+|++
T Consensus 131 le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP 210 (385)
T KOG2862|consen 131 LEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAP 210 (385)
T ss_pred HHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCC
Confidence 899999999989999999988889999999 67788999999999999998432 3345566889999999999999988
Q ss_pred CCcEEEEEEeChHHHHHHHHHhh--------------hcCC---------CccHH-----HHHHHHHhHHHHHHHHHHHH
Q 009523 354 NDVLAGSISGSGKLVTQIRNLHH--------------VLGG---------ALNPN-----AAYLIIRGMKTLHLRVQQQN 405 (532)
Q Consensus 354 gd~~gG~lv~~~~li~~l~~~~~--------------~~G~---------~~~~~-----~a~l~l~~l~tl~~r~~~~~ 405 (532)
.+ .+.+..++...++++.... .+|. +.+.. .+++.+-.-+.++.+.++|.
T Consensus 211 ~G--LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~ 288 (385)
T KOG2862|consen 211 AG--LSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHR 288 (385)
T ss_pred CC--cceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 3567777777676653221 1111 11111 22232333345677888999
Q ss_pred HHHHHHHHHHHhCC
Q 009523 406 STALRMAKILEAHP 419 (532)
Q Consensus 406 ~~a~~la~~L~~~p 419 (532)
++++++...|+++.
T Consensus 289 e~s~~l~~~l~~~G 302 (385)
T KOG2862|consen 289 EMSKWLKLSLEALG 302 (385)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999888863
No 333
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.48 E-value=1.3e-11 Score=133.67 Aligned_cols=215 Identities=16% Similarity=0.164 Sum_probs=141.1
Q ss_pred CchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHh----------cccCC
Q 009523 199 GNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV----------LPKMG 265 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~g-a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~----------l~~~G 265 (532)
.++...+|.++|.+... .+.+.+++||++|+..+++... ...++||.....|++....+... ....|
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 56667788888888775 4678899999999999987542 23367888888898853221100 00112
Q ss_pred c------EEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC----
Q 009523 266 I------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 329 (532)
Q Consensus 266 v------~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~---- 329 (532)
+ .+..++.+|++++++.++. +++.+|++|...+..|.+.| +++|.++|++||+++|+||++...
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~ 296 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY 296 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc
Confidence 1 2344566789999988853 25899999999888888876 568999999999999999996321
Q ss_pred -CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-hhcCCC--ccHHHHHHHHHhHHHHHH--HHHH
Q 009523 330 -LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGA--LNPNAAYLIIRGMKTLHL--RVQQ 403 (532)
Q Consensus 330 -~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~~~G~~--~~~~~a~l~l~~l~tl~~--r~~~ 403 (532)
..+.......|+++ ++|.+|++ ...|.+++++++++.+.... ..++++ .+|..+.+++..++.+.. ..++
T Consensus 297 ~ga~~~~gv~PDi~t--~gK~lggG--~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~ 372 (474)
T PLN02482 297 GGAQEYFGITPDLTT--LGKVIGGG--LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEY 372 (474)
T ss_pred chHhHHhCCCCCEEE--ecchhhCC--CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHH
Confidence 11122233468865 79999864 34566688999888775311 112333 356666656666665532 3344
Q ss_pred HHHHHHHHHHHHHh
Q 009523 404 QNSTALRMAKILEA 417 (532)
Q Consensus 404 ~~~~a~~la~~L~~ 417 (532)
..+..+++.+.|++
T Consensus 373 ~~~~g~~l~~~L~~ 386 (474)
T PLN02482 373 LDKITKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555556555554
No 334
>PRK07036 hypothetical protein; Provisional
Probab=99.47 E-value=3.1e-11 Score=130.76 Aligned_cols=239 Identities=13% Similarity=0.168 Sum_probs=147.7
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHHhcc-----
Q 009523 198 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP----- 262 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~~~~~~l~----- 262 (532)
..++...+|.++|+++... +.+++++||++|+..+++.... + ..+|+.-...|++........-.
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 5678888899999988753 5688889999999999875321 2 25788888888884321111100
Q ss_pred -cCC---cEEEEeCCCC-----------------HHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 263 -KMG---ITATVIDPAD-----------------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 263 -~~G---v~v~~vd~~d-----------------le~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
.++ ..+.+++..+ ++.+++.+. ..++.+|++|......|.+.| +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 000 1122222111 234555553 236999999999877888877 899999999
Q ss_pred hCCCEEEEECCCCCC------Cccc-ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH---h--hhcCC--
Q 009523 315 KKGAIVCIDGTFATP------LNQK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H--HVLGG-- 380 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~-~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~---~--~~~G~-- 380 (532)
+||+++|+||++... +... ....-.||++ ++|.++++- +..|.+++++++.+.+... . ...+.
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSGY-QPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccCc-cccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999996321 1111 2344578887 789998641 2356777888888776521 0 11221
Q ss_pred CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 381 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
..+|..+..++..++.+.. .+++..+..+++.+.|+.. . .+|.+ ...+|.|.|+.+++.
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l---~--~~~~v----------~~vrG~Gl~~~ve~~ 389 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL---R--ELPLV----------GDVRGDHLMACVECV 389 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh---c--cCCCE----------EEEEeeceEEEEEEc
Confidence 2367777777777776642 2333344445555555431 1 12211 123678999999995
No 335
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=1.2e-11 Score=133.91 Aligned_cols=288 Identities=14% Similarity=0.136 Sum_probs=172.6
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHhcc-----
Q 009523 198 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP----- 262 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~l~----- 262 (532)
+.++...+|.++|+++... +.+++++||++|+..+++.... +| .+||.-...|++.......+-.
T Consensus 96 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 96 LANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccc
Confidence 4677788899999998753 5788899999999999875431 33 5788889999884321111100
Q ss_pred -cCC---cEEEEeCC-----------------CCHHHHHHhhcC--CCeeEEEEeC-CCCCCCcccC----HHHHHHHHH
Q 009523 263 -KMG---ITATVIDP-----------------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 263 -~~G---v~v~~vd~-----------------~dle~Le~al~~--~~tklV~les-P~NptG~v~d----l~~I~~la~ 314 (532)
.++ ..+..++. .+++++++.++. +++.+|++|. +....|.+.+ +++|.++|+
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~ 255 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCT 255 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHH
Confidence 000 01112211 124566777742 3699999998 5766676654 789999999
Q ss_pred hCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH----h-hhcCCC--
Q 009523 315 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----H-HVLGGA-- 381 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~-~~~G~~-- 381 (532)
++|+++|+||++... +.......-.|+++ +.|.++|+. +..|++++++++.+.+..- . ...+.+
T Consensus 256 ~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~ 332 (460)
T PRK06916 256 KYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGGY-LPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYT 332 (460)
T ss_pred HcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcCc-cccceeeecHHHHHHhhccccccCccccCCCCC
Confidence 999999999995321 11223344578887 799998642 2467788888887765421 0 112222
Q ss_pred ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--
Q 009523 382 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-- 457 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-- 457 (532)
.+|..+..++..++.+.. ..++..+..+++.+.|++.. . +|.+ ...+|.|.|+.+++..+.
T Consensus 333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~---~--~~~v----------~~vrG~Glm~giel~~~~~~ 397 (460)
T PRK06916 333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLF---A--LKHV----------GDIRQLGLMVGIELVKNKET 397 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh---c--CCCe----------EEeecCCceeeEEeeccccc
Confidence 367777766666665532 23344444555555555421 1 2211 123678899999985321
Q ss_pred --------HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHH
Q 009523 458 --------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADV 525 (532)
Q Consensus 458 --------~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS----vG~ed~~dli~dL 525 (532)
.....+...+...++-+... .+.+||. +..++.+.+++.|
T Consensus 398 ~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------g~~l~~~Ppl~it~~~id~~~~~l 449 (460)
T PRK06916 398 KEPFEWTERVGVQVCKRSRELGMLTRPL----------------------------GNTIVFMPPLASTIDELDEMLRIL 449 (460)
T ss_pred ccCCCchhhHHHHHHHHHHHCCeEEEec----------------------------CCEEEEeCCcccCHHHHHHHHHHH
Confidence 11234555554444332211 2356665 3446677777777
Q ss_pred HHHHhh
Q 009523 526 LQALHA 531 (532)
Q Consensus 526 ~~AL~~ 531 (532)
+++|++
T Consensus 450 ~~~l~~ 455 (460)
T PRK06916 450 YKAISD 455 (460)
T ss_pred HHHHHh
Confidence 777764
No 336
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.47 E-value=1.9e-11 Score=131.11 Aligned_cols=216 Identities=13% Similarity=0.169 Sum_probs=141.0
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-CC-CEEEEcCCCCcchHHH-HHH-hcc---------
Q 009523 198 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-AG-GHIVTTTDCYRKTRIF-IET-VLP--------- 262 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~-~G-d~VIv~~~~y~~t~~~-~~~-~l~--------- 262 (532)
..++...+|.++|.++.+. +.+.+++||++|+..+++.... .| .+|+.-...|+|.... +.. .+.
T Consensus 90 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~ 169 (433)
T PRK00615 90 LTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTH 169 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCC
Confidence 4577788888999988754 4788899999999999875421 23 5788888888884211 100 000
Q ss_pred cC-----CcEEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC-C
Q 009523 263 KM-----GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L 330 (532)
Q Consensus 263 ~~-----Gv~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~-~ 330 (532)
.. ......++.+|++++++.+.. .++.+|++|......|.+.| +++|.++|++||+++|+||++... .
T Consensus 170 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~ 249 (433)
T PRK00615 170 LVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRV 249 (433)
T ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 00 011223355688999988853 35889999999888888877 559999999999999999997321 1
Q ss_pred c----ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcCCC--ccHHHHHHHHHhHHHHHH--HH
Q 009523 331 N----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTLHL--RV 401 (532)
Q Consensus 331 ~----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~~--~~~~~a~l~l~~l~tl~~--r~ 401 (532)
. ........|+++ ++|.+|++ ..+|++++++++++.+..... ..+++ .+|..+..++..++.+.. .+
T Consensus 250 G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~ 325 (433)
T PRK00615 250 AQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFY 325 (433)
T ss_pred cHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 1 122233568876 89999864 357889999998887753211 12222 467777777777765532 23
Q ss_pred HHHHHHHHHHHHHHHh
Q 009523 402 QQQNSTALRMAKILEA 417 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~ 417 (532)
++..++.+++.+.|++
T Consensus 326 ~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 326 TQLSTLEQNFLSPIEE 341 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444445555444443
No 337
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.47 E-value=6.8e-12 Score=134.86 Aligned_cols=227 Identities=21% Similarity=0.215 Sum_probs=153.2
Q ss_pred HHHHHHHhhhCC-C--cEEEeCCHHHHHHHHHHHhcc-----C---CC------EEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 205 VVEEKMSALEGA-E--STVIMASGMSASTVMLLALVP-----A---GG------HIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 205 ~Le~~lA~l~ga-~--~~i~~sSG~~Ai~~al~all~-----~---Gd------~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
++-..++++++. + ...++++|++|+.+++.+... . +. .|+++...|.+... .+..+|++
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~K----aa~~lG~~ 180 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEK----AARYLGLG 180 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHH----HHHHhCCC
Confidence 344566667776 3 368899999999887764411 1 11 69999988887553 44445555
Q ss_pred EEEeC--C----CCHHHHHHhhcCCCeeE--EEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc--ccc---
Q 009523 268 ATVID--P----ADMEGLEAALNNNNVSL--FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKA--- 334 (532)
Q Consensus 268 v~~vd--~----~dle~Le~al~~~~tkl--V~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~--~~~--- 334 (532)
.+.++ . .|+++|+++++++ +.. |+....+-++|.+-|+++|+++|++++++++||++++..+. .++
T Consensus 181 ~~~v~~~~~~~~id~~~l~~~i~~~-t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~ 259 (460)
T COG0076 181 LRRVPTVPTDYRIDVDALEEAIDEN-TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR 259 (460)
T ss_pred ceeEEeccCccccCHHHHHHHHHhh-ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccch
Confidence 54443 2 2899999999884 555 77778889999999999999999999999999999887532 111
Q ss_pred --cc-cCCcEEEECCccccCCCCCcEEEEEEeChH--HHHHHHHHhhhc-----------CCCc--cHHHHHHHHHhH--
Q 009523 335 --LS-LGADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIRNLHHVL-----------GGAL--NPNAAYLIIRGM-- 394 (532)
Q Consensus 335 --l~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--li~~l~~~~~~~-----------G~~~--~~~~a~l~l~~l-- 394 (532)
.. .++|-++.++||++..+- .+|+++.+++ +.+.+....... +... ....+|..++.+
T Consensus 260 ~~f~l~~vdSIt~d~HK~g~aP~--~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~ 337 (460)
T COG0076 260 WDFGLEGVDSITVDGHKYGLAPI--GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGR 337 (460)
T ss_pred hhcCCCCceEEEECcccccCCCC--CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCH
Confidence 11 278999999999987654 3566665443 333332111111 1111 223455554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 395 KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 395 ~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
+.+...+++..++++++++.|++.+...-+.-|. .++|+|.+++
T Consensus 338 eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-----------------l~~V~fr~~~ 381 (460)
T COG0076 338 EGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-----------------LPIVAFRLKD 381 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-----------------cceEEEEcCC
Confidence 5566777788899999999999887665565554 3589999864
No 338
>PRK06149 hypothetical protein; Provisional
Probab=99.46 E-value=3.1e-11 Score=141.54 Aligned_cols=288 Identities=14% Similarity=0.147 Sum_probs=177.8
Q ss_pred CCCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHh-c--------
Q 009523 195 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-L-------- 261 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~-l-------- 261 (532)
.+|+.++...+|.++|+++.. .+.+++++||++|+..+++.. .....+||+.+..|+|.......+ .
T Consensus 618 ~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~ 697 (972)
T PRK06149 618 NSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQA 697 (972)
T ss_pred cccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccc
Confidence 356777888999999999884 467899999999999999832 123356888888888732111000 0
Q ss_pred -cc--CCcEEEEeC--------CCC-----HHHHHHhhc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009523 262 -PK--MGITATVID--------PAD-----MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 316 (532)
Q Consensus 262 -~~--~Gv~v~~vd--------~~d-----le~Le~al~-----~~~tklV~lesP~NptG~v~d----l~~I~~la~~~ 316 (532)
.. .++.....+ ..+ .+++++.++ ..++.+|++|......|.+.+ +++|.++|++|
T Consensus 698 ~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 698 LETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred cCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 00 011111001 011 234333332 236899999999888888887 99999999999
Q ss_pred CCEEEEECCCCC-CC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhc-CCCccHHHHH
Q 009523 317 GAIVCIDGTFAT-PL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGALNPNAAY 388 (532)
Q Consensus 317 gi~lIvDet~a~-~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~-G~~~~~~~a~ 388 (532)
|+++|+||++.. +- .........||++ ++|.+|++ ...|++++++++.+.+......+ +...+|..+.
T Consensus 778 g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~G--~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~a 853 (972)
T PRK06149 778 GGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGNG--HPLGAVITRREIAEALEAEGYFFSSTGGSPVSCR 853 (972)
T ss_pred CCEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccCC--eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHH
Confidence 999999999632 11 1122234578885 89999864 45788889998888775311111 1235788887
Q ss_pred HHHHhHHHHHHHHHHHHHHH----HHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-----
Q 009523 389 LIIRGMKTLHLRVQQQNSTA----LRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----- 455 (532)
Q Consensus 389 l~l~~l~tl~~r~~~~~~~a----~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g----- 455 (532)
.++..++.+.. ++..+++ +++.+.|++ +|.+. ..+|.|.|+.+++..
T Consensus 854 aala~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~gvel~~~~~~~ 913 (972)
T PRK06149 854 IGMAVLDVLRE--EKLQENARRVGDHLKARLEALADRHPLIG------------------AVHGMGLYLGVELVRDRQTL 913 (972)
T ss_pred HHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE------------------EEeecceEEEEEEecCcccC
Confidence 77777776542 1233444 444444443 22222 235788999999842
Q ss_pred --CHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHH
Q 009523 456 --DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQAL 529 (532)
Q Consensus 456 --~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS----vG~ed~~dli~dL~~AL 529 (532)
..+....+.+.+...|+-+... |...+.|||. +..++.+.+++.|+++|
T Consensus 914 ~~~~~~~~~i~~~l~~~Gvl~~~~-------------------------g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l 968 (972)
T PRK06149 914 EPATEETAAICDRLLELGVIMQPT-------------------------GDHLNILKIKPPLCLDRESADFFVDMLDRVL 968 (972)
T ss_pred CCChHHHHHHHHHHHhCCeEEeec-------------------------CCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 1233556666665555443321 1123567754 44567778888888887
Q ss_pred hh
Q 009523 530 HA 531 (532)
Q Consensus 530 ~~ 531 (532)
.+
T Consensus 969 ~~ 970 (972)
T PRK06149 969 TE 970 (972)
T ss_pred Hh
Confidence 64
No 339
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.46 E-value=1e-11 Score=141.60 Aligned_cols=212 Identities=15% Similarity=0.156 Sum_probs=145.5
Q ss_pred HHHHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~--------~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..++++.|+++.|-+.+ +..++|+.|..+.++++-. ..+.|+++...|+.+.. .+...|++++.++.
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa----sa~~~G~~Vv~V~~ 607 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA----SAAMAGMQVVPVNC 607 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH----HHHHCCCEEEEecc
Confidence 45578999999998754 5556666666555554421 23578999999977653 34556888888875
Q ss_pred C-----CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC-HHHHHHHHHhCCCEEEEECCCCC-C-CcccccccCCcEEE
Q 009523 274 A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT-P-LNQKALSLGADLVL 343 (532)
Q Consensus 274 ~-----dle~Le~al~~--~~tklV~lesP~NptG~v~d-l~~I~~la~~~gi~lIvDet~a~-~-~~~~~l~~gaDivv 343 (532)
+ |+++|++++++ .++++|++.+|+| +|.+.| +++|+++||++|.++++|.++.. . ....|.++|+|+++
T Consensus 608 d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~ 686 (939)
T TIGR00461 608 DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCH 686 (939)
T ss_pred CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEE
Confidence 3 89999999974 3799999999999 798877 99999999999999999999744 2 33566789999999
Q ss_pred ECCccccCCC---CCcEEEEEEeChHHHHHHHH--Hh---------hhcCCC----ccH----HHHHHHH--HhHHHHHH
Q 009523 344 HSATKFIGGH---NDVLAGSISGSGKLVTQIRN--LH---------HVLGGA----LNP----NAAYLII--RGMKTLHL 399 (532)
Q Consensus 344 ~S~sK~lgg~---gd~~gG~lv~~~~li~~l~~--~~---------~~~G~~----~~~----~~a~l~l--~~l~tl~~ 399 (532)
.|.||+|+++ |+...|++..++.+...+.. .. ...|.. .+. ..+|..+ -|-+.+..
T Consensus 687 ~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~ 766 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPK 766 (939)
T ss_pred ecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHH
Confidence 9999977622 22236888887655443321 00 001111 111 2333332 23444555
Q ss_pred HHHHHHHHHHHHHHHHHhCC
Q 009523 400 RVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p 419 (532)
..+....|+.++++.|+++.
T Consensus 767 ~a~~ailnAnYl~~rL~~~~ 786 (939)
T TIGR00461 767 ASVVAILNANYMATRLKDHY 786 (939)
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 55666789999999998754
No 340
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.46 E-value=5.3e-12 Score=131.39 Aligned_cols=237 Identities=16% Similarity=0.210 Sum_probs=153.0
Q ss_pred CCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc-------c-CCCEEEEcCCCCcchHH-HH-------
Q 009523 196 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV-------P-AGGHIVTTTDCYRKTRI-FI------- 257 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all-------~-~Gd~VIv~~~~y~~t~~-~~------- 257 (532)
..+.++...+|.++|.++.+ .+.+++++||++|++.+++... . ...+|+.....|++... .+
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 133 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPP 133 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTH
T ss_pred cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcc
Confidence 66788899999999999994 4678899999999999997554 2 33689999999987321 11
Q ss_pred -HHhcccCCcEEEEeCCCCHHH----------HHH---hhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCE
Q 009523 258 -ETVLPKMGITATVIDPADMEG----------LEA---ALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 319 (532)
Q Consensus 258 -~~~l~~~Gv~v~~vd~~dle~----------Le~---al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~ 319 (532)
..........+..++..++.. +++ .....++.+|++|......|...+ +++|.++|++||++
T Consensus 134 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 134 YRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp HHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 111122223445666666554 222 222336999999998877676653 78999999999999
Q ss_pred EEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009523 320 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 393 (532)
Q Consensus 320 lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~ 393 (532)
+|+||++... +........+|+++ ++|.++++ ...|.+++++++.+.+...........+|..+..++..
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~--~gK~l~gG--~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVT--FGKGLGGG--LPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEE--EEGGGGTT--SSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred eecccccccccccCCccceecccccCcccc--cccchhhh--hhcccccccchhhccccccccccccccchHhhhhhhhH
Confidence 9999995432 22344556689999 56999976 46777888888776653322111122357777766666
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 394 MKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 394 l~tl~~r--~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
++.+... .++..+...++.+.|++ ++.+..| +|.|.|+.+++.
T Consensus 290 l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~Gl~~~ie~~ 338 (339)
T PF00202_consen 290 LEILEEEDLLERVRELGERLREGLRELAARYPLIGEV------------------RGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEE------------------EEETTEEEEEES
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eeeCeEEEEEEE
Confidence 6655432 33333444444444432 2444333 567889999885
No 341
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.45 E-value=1.7e-11 Score=139.08 Aligned_cols=147 Identities=16% Similarity=0.233 Sum_probs=114.2
Q ss_pred HHHHHHHHHhhhCCCcEEEeC-CHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALEGAESTVIMA-SGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~~i~~s-SG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..+|++.++++.|.+.+-+.. +|+.+..++++++.. + .++|+++...|+.+... +...|++++.++.
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~GieVv~Vp~ 620 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMAGMRVVIVEC 620 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHHCCCEEEEecc
Confidence 567899999999998775554 777776666665432 2 35788999899776532 4456899988875
Q ss_pred C-----CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCC-CCc-ccccccCCcEEEE
Q 009523 274 A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLN-QKALSLGADLVLH 344 (532)
Q Consensus 274 ~-----dle~Le~al~~--~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~-~~~-~~~l~~gaDivv~ 344 (532)
+ |+++|++++++ .++++|.+.+|++-.+...|+++|+++||++|+++++|.+... ... ..|.++|+|+++.
T Consensus 621 D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~ 700 (954)
T PRK12566 621 DPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHM 700 (954)
T ss_pred CCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEe
Confidence 3 89999999872 2688899989987766667799999999999999999999653 233 3467899999999
Q ss_pred CCccccCCC
Q 009523 345 SATKFIGGH 353 (532)
Q Consensus 345 S~sK~lgg~ 353 (532)
++||+|+++
T Consensus 701 s~HKtf~~P 709 (954)
T PRK12566 701 NLHKTFCIP 709 (954)
T ss_pred cCCcccCcC
Confidence 999999744
No 342
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=2.9e-11 Score=130.93 Aligned_cols=240 Identities=13% Similarity=0.170 Sum_probs=147.9
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHHhc-----
Q 009523 197 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVL----- 261 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~-Gd~VIv~~~~y~~t~~~~~~~l----- 261 (532)
.+.++...+|.++|+++.. .+.+++++||++|+..+++.... + ..+||.....|++.......+-
T Consensus 86 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 4567888889999999874 35788889999999999885421 2 3578888888888431110100
Q ss_pred -ccCC---cEEEEeCCC-----------------CHHHHHHhhcC--CCeeEEEEeC-CCCCCCcccC----HHHHHHHH
Q 009523 262 -PKMG---ITATVIDPA-----------------DMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLC 313 (532)
Q Consensus 262 -~~~G---v~v~~vd~~-----------------dle~Le~al~~--~~tklV~les-P~NptG~v~d----l~~I~~la 313 (532)
..++ ..+..++.. +++++++.+.. +++.+|++|. .....|.+.+ +++|.++|
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 0000 012222211 24567777742 3699999998 5665676654 78999999
Q ss_pred HhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-----hhhcCCC-
Q 009523 314 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGA- 381 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-----~~~~G~~- 381 (532)
+++|+++|+||++... +.......-.|+++ +.|.++|+- ...|.+++++++.+.+... ...++.+
T Consensus 246 ~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 246 DRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALTGGY-LPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhccCCc-ccceEEEecHHHHHHHhcccccccccccCCCC
Confidence 9999999999995321 11233445579998 689998641 2467788888888766421 0112222
Q ss_pred -ccHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 382 -LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 382 -~~~~~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
.+|..+.+++..++.+... .++..+..+++.+.|++.. .+|.+ ...+|.|.|+.+++.
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-----~~~~v----------~~vrG~Gl~~gie~~ 383 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-----DHPHV----------AEVRQTGMILAIEMV 383 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-----cCCCE----------EEeEeceeEEEEEec
Confidence 3677777777777665431 2222333344444444321 12211 123578899999985
No 343
>PRK07483 hypothetical protein; Provisional
Probab=99.43 E-value=3.1e-11 Score=130.05 Aligned_cols=294 Identities=15% Similarity=0.190 Sum_probs=172.5
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHhc-----
Q 009523 197 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL----- 261 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~l----- 261 (532)
.+.++...+|.++|+++.. .+.+.+++||++|+..+++.... +| .+||.....|++.......+-
T Consensus 69 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~ 148 (443)
T PRK07483 69 FFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWR 148 (443)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCccc
Confidence 3567888899999999874 36788899999999999874321 33 468888888888431110100
Q ss_pred -ccCC---cEEEEeCC----CC--------------HHHHHHhhc---CCCeeEEEEeCCCC-CCCcccC----HHHHHH
Q 009523 262 -PKMG---ITATVIDP----AD--------------MEGLEAALN---NNNVSLFFTESPTN-PFLRCVD----VKLVSD 311 (532)
Q Consensus 262 -~~~G---v~v~~vd~----~d--------------le~Le~al~---~~~tklV~lesP~N-ptG~v~d----l~~I~~ 311 (532)
..++ ..+..++. .+ ++++++++. ..++.+|++|.... ..|.+.+ +++|.+
T Consensus 149 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~ 228 (443)
T PRK07483 149 REPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIRE 228 (443)
T ss_pred ccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHH
Confidence 0011 11122221 11 256666553 23689999998874 3465554 889999
Q ss_pred HHHhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCC--
Q 009523 312 LCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA-- 381 (532)
Q Consensus 312 la~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~-- 381 (532)
+|++||+++|+||++... +.......-.||++ ++|.++++- ...|.+++++++.+.+.... ..++.+
T Consensus 229 lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~ 305 (443)
T PRK07483 229 VCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGAGY-QPIGAVLASDRIYDAIADGSGFFQHGHTYL 305 (443)
T ss_pred HHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhccCc-cccEEEEEcHHHHHHHhcCCCccccCCCCC
Confidence 999999999999995422 11223344578888 789998651 23677778888877765311 012222
Q ss_pred ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 382 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
-+|..+.+++..++.+.. .+++..+..+++.+.|++ +|.+. +.+|.|.|+.+++..
T Consensus 306 gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vRG~Glm~gie~~~ 367 (443)
T PRK07483 306 GHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVG------------------DIRGRGLFVGVELVA 367 (443)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCee------------------eEeecccEEEEEEee
Confidence 367777776666665532 123333334444444443 22222 235788899999853
Q ss_pred CH----------HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHH
Q 009523 456 DL----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDL 521 (532)
Q Consensus 456 ~~----------~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv----G~ed~~dl 521 (532)
+. .....+...+...++-+...+. . .-|..++.|||.- ..++.++.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~--------~------------~~~~~~~~l~~~PpL~it~~eid~~ 427 (443)
T PRK07483 368 DRATKAPFDPALKLHARIKREAMARGLMVYPMGG--------T------------IDGVRGDHVLLAPPFIITAAQIDEI 427 (443)
T ss_pred cccccCCCCchhhHHHHHHHHHHHCCcEEEecCc--------c------------ccCCCCCEEEEECCCCCCHHHHHHH
Confidence 21 1234555555444433221100 0 0011135778654 44677778
Q ss_pred HHHHHHHHhh
Q 009523 522 KADVLQALHA 531 (532)
Q Consensus 522 i~dL~~AL~~ 531 (532)
++.|+++|.+
T Consensus 428 ~~~l~~~l~~ 437 (443)
T PRK07483 428 VERLGDAIDA 437 (443)
T ss_pred HHHHHHHHHH
Confidence 8888888764
No 344
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.43 E-value=5.3e-11 Score=127.89 Aligned_cols=287 Identities=12% Similarity=0.118 Sum_probs=167.1
Q ss_pred CCCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHhcc--------C------CCEEEEcCCCCcchHHHHHH
Q 009523 197 RYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTRIFIET 259 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~---ga~~~i~~sSG~~Ai~~al~all~--------~------Gd~VIv~~~~y~~t~~~~~~ 259 (532)
.+.++...++.++|+++. +.+.+++++||++|++.+++.... . +.+||.....|+|.......
T Consensus 81 ~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als 160 (431)
T TIGR03251 81 DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLS 160 (431)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhh
Confidence 455677777888888875 236788999999999999875421 1 36799999999884322111
Q ss_pred hcc------cCC-------cEEEEe--C-------------CCCHHHHHHhhc--CCCeeEEEEeCCCCCCCcccC----
Q 009523 260 VLP------KMG-------ITATVI--D-------------PADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---- 305 (532)
Q Consensus 260 ~l~------~~G-------v~v~~v--d-------------~~dle~Le~al~--~~~tklV~lesP~NptG~v~d---- 305 (532)
.-. .+. +...+. + ..+++++++.+. .+++.+|++|......|.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~ 240 (431)
T TIGR03251 161 LTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEF 240 (431)
T ss_pred ccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHH
Confidence 100 000 000000 0 012445555663 236999999998887887753
Q ss_pred HHHHHHHHHhCCCEEEEECCCCCC-C-----cccccccCCcEEEECCccccCCCCCcEEEEEEeCh--HHHHHHHHHhhh
Q 009523 306 VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHV 377 (532)
Q Consensus 306 l~~I~~la~~~gi~lIvDet~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~~~~~~ 377 (532)
+++|.++|++||+++|+||++... . ..+......|+++ ++|.+. ++|++.+++ ++..........
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~~~~i~~~~~~~~~~~~~ 313 (431)
T TIGR03251 241 LRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMAGRRVDEVADNVFAVPSR 313 (431)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEecchHHHhhhhcccCccc
Confidence 889999999999999999996531 1 1223344678887 678762 357776543 222111110111
Q ss_pred cCC--CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEE
Q 009523 378 LGG--ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 453 (532)
Q Consensus 378 ~G~--~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l 453 (532)
.+. ..+|..+.++...++.+.. ..++..+..+++.+.|++.-. .+|.+. ...+|.|.|+.+++
T Consensus 314 ~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~i---------~~vrg~G~~~~i~~ 380 (431)
T TIGR03251 314 LNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAA----EFPHLV---------SNPRGRGLMCAFDL 380 (431)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCccce---------ecccccceeEEEEe
Confidence 122 2356666666666665432 123333444455544443100 112111 01245688999999
Q ss_pred cCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 454 DGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 454 ~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
++ ......+...+...++-+... ..+.|||+..+..+++.++.+.++|++
T Consensus 381 ~~-~~~~~~~~~~l~~~Gvl~~~~---------------------------g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 381 PS-TADRDEVIRQLYREGVLLLGC---------------------------GERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CC-HHHHHHHHHHHHhCCeEEecC---------------------------CCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 64 234456666665555433211 125699999998888888888888765
No 345
>PRK06148 hypothetical protein; Provisional
Probab=99.42 E-value=1.1e-10 Score=137.21 Aligned_cols=288 Identities=16% Similarity=0.127 Sum_probs=176.8
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHH-HH----HhcccCC-
Q 009523 196 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IE----TVLPKMG- 265 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~-~~----~~l~~~G- 265 (532)
+++.+|...+|.++|+++... +.+.+++||++|+..+++... ....+||+....|+|.... +. ..-...+
T Consensus 658 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 737 (1013)
T PRK06148 658 TRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGK 737 (1013)
T ss_pred CCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCC
Confidence 477889999999999998754 568899999999999987542 2345788888888884211 10 0000111
Q ss_pred ---cEEEEe--------CCC--C-------HHHHHHhhc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009523 266 ---ITATVI--------DPA--D-------MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 316 (532)
Q Consensus 266 ---v~v~~v--------d~~--d-------le~Le~al~-----~~~tklV~lesP~NptG~v~d----l~~I~~la~~~ 316 (532)
-.+..+ +.. + .+.+++.++ ..++.+|++|......|.+.+ +++|.++|+++
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~ 817 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA 817 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh
Confidence 011111 111 1 134555443 136999999998877787776 88999999999
Q ss_pred CCEEEEECCCCCC-------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC--ccHHHH
Q 009523 317 GAIVCIDGTFATP-------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAA 387 (532)
Q Consensus 317 gi~lIvDet~a~~-------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~~~~~a 387 (532)
|+++|.||++... +.+.....-.||++ +.|.+|++ ...|++++++++.+.+.... .++++ .+|..+
T Consensus 818 g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lggG--~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~ 892 (1013)
T PRK06148 818 GGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGNG--HPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSC 892 (1013)
T ss_pred CCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccCC--cceEEEEEcHHHHhhccCCC-ccccCCCCCHHHH
Confidence 9999999995321 11222344578887 79999875 35777888888887764311 12222 367777
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----
Q 009523 388 YLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----- 456 (532)
Q Consensus 388 ~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----- 456 (532)
.+++..++.+.. .+++..+..+++.+.|++ +|.+. ..+|.|.|+.+++..+
T Consensus 893 aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~VrG~Gl~~gvel~~~~~~~~ 954 (1013)
T PRK06148 893 AIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIG------------------DVRGMGLFLGIELVTDRKTKA 954 (1013)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCce------------------EEeeeceEEEEEecCCccccC
Confidence 777777766532 122233333444444433 22222 2357889999999632
Q ss_pred --HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 457 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 457 --~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
.+....+++.+...|+-+... |..++.|||...+ ++.+.+++.|+++|.
T Consensus 955 ~~~~~~~~i~~~~~~~Gvl~~~~-------------------------g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~ 1009 (1013)
T PRK06148 955 PATAIARYVKNGARERGILIGTE-------------------------GPHDNVLKIRPPLIFSRADADHLLEVLDDVLA 1009 (1013)
T ss_pred ccHHHHHHHHHHHHhCCeEEecc-------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH
Confidence 123456666665555443221 1124677777664 556667777777765
Q ss_pred h
Q 009523 531 A 531 (532)
Q Consensus 531 ~ 531 (532)
+
T Consensus 1010 ~ 1010 (1013)
T PRK06148 1010 A 1010 (1013)
T ss_pred H
Confidence 4
No 346
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.42 E-value=3.5e-13 Score=137.84 Aligned_cols=177 Identities=22% Similarity=0.317 Sum_probs=50.8
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC---CcchHHHHHHhcccCCcEEEEeCC---CCHHH
Q 009523 205 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---ADMEG 278 (532)
Q Consensus 205 ~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~---y~~t~~~~~~~l~~~Gv~v~~vd~---~dle~ 278 (532)
.+++.++++.|+++++++++..+|+.+++.++. +|.+||+++.. +++.++. ...++.-|..++.|-. ..+++
T Consensus 51 ~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRi-p~vm~~sGa~lvEVGttN~t~~~D 128 (367)
T PF03841_consen 51 HVEELLCELTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRI-PDVMRQSGARLVEVGTTNRTHLSD 128 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 467889999999999999999999999888876 47788888654 4554432 2455666776665543 35889
Q ss_pred HHHhhcCCCeeEEEEeCCCCCCCc----ccCHHHHHHHHHhCCCEEEEECCCC------------CCCcccccccCCcEE
Q 009523 279 LEAALNNNNVSLFFTESPTNPFLR----CVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLGADLV 342 (532)
Q Consensus 279 Le~al~~~~tklV~lesP~NptG~----v~dl~~I~~la~~~gi~lIvDet~a------------~~~~~~~l~~gaDiv 342 (532)
++++|++ +|.+++--+++|..-. -.+++++++++++|++++++|..-+ .+-....+..|+|+|
T Consensus 129 ye~AI~e-~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV 207 (367)
T PF03841_consen 129 YEKAITE-NTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLV 207 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEE
T ss_pred ccccccc-cccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEE
Confidence 9999998 6888877688887322 3589999999999999999998731 122234467899999
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAA 387 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a 387 (532)
++|.-|.+||+. +|+++|++++++++++..-......+-...
T Consensus 208 ~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~pl~RalrvdK~tl 249 (367)
T PF03841_consen 208 TFSGDKLLGGPQ---AGIIVGKKELIEKLKKHPLGRALRVDKLTL 249 (367)
T ss_dssp EEETTSSSSS-S----EEEEEEHHHHHHHHHHHHTTT-B--HHHH
T ss_pred EEECCCcCCCCC---eEEEEeCHHHHHHHhhCCCcceEeeCHHHH
Confidence 999999999986 899999999999998654333333343333
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.42 E-value=2e-10 Score=124.23 Aligned_cols=233 Identities=13% Similarity=0.107 Sum_probs=140.4
Q ss_pred CCCchhHHHHHHHHHhhhCCC----cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc--------
Q 009523 197 RYGNPTTVVVEEKMSALEGAE----STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-------- 261 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~----~~i~~-sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l-------- 261 (532)
.+.++...+|.++|+++.+.. ..+++ +||++|+..+++... ...++||.....|++........-
T Consensus 97 ~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~ 176 (459)
T PRK06931 97 DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNA 176 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccC
Confidence 356788888999999887532 24455 799999999987442 234678888888988543221110
Q ss_pred -ccCCcEEEEeCCC-------------CHHHH----HHhhc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 262 -PKMGITATVIDPA-------------DMEGL----EAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 262 -~~~Gv~v~~vd~~-------------dle~L----e~al~-----~~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
......+.+++.. +.+.+ ++.+. ..++.+|++|......|.+.+ +++|.++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 177 VNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 0001122333321 12222 33332 125899999998877777665 789999999
Q ss_pred hCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCC--CccHHH
Q 009523 315 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNA 386 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~--~~~~~~ 386 (532)
+||+++|.||++... +.......-.||++ ++|.++++ ...|++++++++ +.+... .+++ ..+|..
T Consensus 257 ~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~gG--~Pi~av~~~~~~-~~~~~~--~~~~T~~gnpla 329 (459)
T PRK06931 257 KHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGGG--LPLAVLGIKKEF-DAWQPG--GHTGTFRGNQLA 329 (459)
T ss_pred HcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccCC--cceeeeeeHHHH-hhccCC--CCCCCCCCCHHH
Confidence 999999999995422 12233344578988 78999875 345667766653 443221 1222 246777
Q ss_pred HHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 387 AYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 387 a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
+..++..++.+.. ..++..+..+++.+.|++ +|.+.. .+|.|.|+.+++.
T Consensus 330 ~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------vrG~Glm~giel~ 385 (459)
T PRK06931 330 MATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGN------------------VRGRGLMIGIEIV 385 (459)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEe------------------EecCceEEEEEEc
Confidence 7777777765532 122222333444444433 332222 3577889999995
No 348
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.40 E-value=1.6e-10 Score=124.02 Aligned_cols=287 Identities=14% Similarity=0.119 Sum_probs=172.0
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHhcc----
Q 009523 197 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP---- 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~l~---- 262 (532)
...++...++.++|+++.+. +.+++++||++|+..+++.... +| .+||+....|++.......+..
T Consensus 84 ~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~ 163 (427)
T TIGR00508 84 GFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENS 163 (427)
T ss_pred ccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccc
Confidence 34567778888999988754 5788899999999998875431 23 5789999999885322111100
Q ss_pred ---cCC--c-EEEEeC-----------CCCHHHHHHhhcC--CCeeEEEEeCC-CCCCCccc----CHHHHHHHHHhCCC
Q 009523 263 ---KMG--I-TATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGA 318 (532)
Q Consensus 263 ---~~G--v-~v~~vd-----------~~dle~Le~al~~--~~tklV~lesP-~NptG~v~----dl~~I~~la~~~gi 318 (532)
.++ . .+..++ ..|++++++.+.. .++.+|++|.. ++..|.+. .+++|.++|++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~ 243 (427)
T TIGR00508 164 MHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDI 243 (427)
T ss_pred ccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC
Confidence 000 0 011111 1146677777742 25889999986 55445433 48899999999999
Q ss_pred EEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh---hhcCC--CccHHHH
Q 009523 319 IVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNAA 387 (532)
Q Consensus 319 ~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~--~~~~~~a 387 (532)
++|+||++... +.........|+++ ++|.++|+ -...+.+++++++.+.++... ..++. ..+|..+
T Consensus 244 llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG-~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~ 320 (427)
T TIGR00508 244 LLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGG-YMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLAC 320 (427)
T ss_pred EEEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcC-cccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHH
Confidence 99999996321 11222344578887 79999653 234677888888888776321 01111 2357777
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009523 388 YLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 465 (532)
Q Consensus 388 ~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~ 465 (532)
..++..++.+.. ..++..+...++.+.|++... +|.+ ...+|.|.++.+++... .....+.+
T Consensus 321 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~i----------~~vrg~G~~~~i~~~~~-~~~~~~~~ 384 (427)
T TIGR00508 321 AVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-----NPVV----------KDVRVLGAIGVVEMYKP-VNVEELQK 384 (427)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCE----------EeEeccccEEEEEECCc-cCHHHHHH
Confidence 666666665432 234445566666666665311 2211 11256788999999632 23445665
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 530 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~ 530 (532)
.+...++-+... .+.+|++..+ ++++.+++.|+++|.
T Consensus 385 ~l~~~Gv~~~~~----------------------------~~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 385 KFVEQGVWIRPF----------------------------GKLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred HHHHCCeEEEec----------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 655444433210 1357776654 455666666666664
No 349
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.40 E-value=2.8e-11 Score=134.80 Aligned_cols=149 Identities=13% Similarity=0.198 Sum_probs=118.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
+.....+.++..|+++|++++.++.+|+ .+|.+++++++++||.|++++++|.+.+. .+...|+..+++.+.
T Consensus 193 ~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h----aLilsga~PVYl~P~rn~ 268 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH----LMMMSDVTPIYFRPTRNA 268 (714)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeEEEecccccc
Confidence 4455678899999999999999999997 88999999999999999999999998664 344567777776432
Q ss_pred -------C-----HHHHHHhhcCC-Cee---EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc------
Q 009523 275 -------D-----MEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------ 332 (532)
Q Consensus 275 -------d-----le~Le~al~~~-~tk---lV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~------ 332 (532)
+ .+.++++++++ +.+ .+++.+|+ ..|.+.|+++|+++|+.++ +++||+|+....+
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~ 345 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG 345 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCC
Confidence 3 78899888653 233 68887885 7899999999999999887 6899998764322
Q ss_pred -cccccCC---c--EEEECCccccCCCC
Q 009523 333 -KALSLGA---D--LVLHSATKFIGGHN 354 (532)
Q Consensus 333 -~~l~~ga---D--ivv~S~sK~lgg~g 354 (532)
.++..|+ | +++.|.||.+++.+
T Consensus 346 ~sam~~ga~~~~~i~vtQStHKtL~alT 373 (714)
T PRK15400 346 KCGMSGGRVEGKVIYETQSTHKLLAAFS 373 (714)
T ss_pred cChhhcCCCCCCceEEEEchhhcccchh
Confidence 2334566 5 99999999999765
No 350
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=6.2e-11 Score=116.53 Aligned_cols=295 Identities=16% Similarity=0.157 Sum_probs=162.8
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHhc---cCCC--EEEEc-CCCCcchHHHH--HHhcccCCcEE
Q 009523 201 PTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV---PAGG--HIVTT-TDCYRKTRIFI--ETVLPKMGITA 268 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga---~~~i~~sSG~-~Ai~~al~all---~~Gd--~VIv~-~~~y~~t~~~~--~~~l~~~Gv~v 268 (532)
+..+.|.+.+-+-+|- ++.|..++|+ .+...++.-+. ..|+ +|+.+ .|.|-+.-..- .+.+-...-++
T Consensus 78 ~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~i 157 (417)
T COG3977 78 VLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNI 157 (417)
T ss_pred HHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCc
Confidence 3444455555555564 5678888998 55555554442 2343 45554 66776532110 00110011111
Q ss_pred EEeC------CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc------c
Q 009523 269 TVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------K 333 (532)
Q Consensus 269 ~~vd------~~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~------~ 333 (532)
..++ ..|.++|. +.+ ++.+|++.-|+||||.+.. +.+|.++|++||+++++|++|+.|++- .
T Consensus 158 el~~~g~FKY~vDF~~l~--i~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~ 234 (417)
T COG3977 158 ELLPAGQFKYHVDFEHLH--IGE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDAT 234 (417)
T ss_pred ccccccceeeccCHHHcc--ccc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccc
Confidence 1111 12566654 234 6999999999999999985 556677789999999999999987652 1
Q ss_pred ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcC---CCccHHHHHHHHH-h-HHHHHHHH-HHH-HH
Q 009523 334 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG---GALNPNAAYLIIR-G-MKTLHLRV-QQQ-NS 406 (532)
Q Consensus 334 ~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G---~~~~~~~a~l~l~-~-l~tl~~r~-~~~-~~ 406 (532)
++-...-+.+.|+||.--++ .+.|++++++++++.+..+..... +.+++..+.-++. + +..+...+ +-. ..
T Consensus 235 ~~w~~NiilC~SLSK~GLPG--~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~ 312 (417)
T COG3977 235 PLWNENIILCMSLSKLGLPG--SRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRN 312 (417)
T ss_pred ccCCCCEEEEeehhhcCCCC--cceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHH
Confidence 22112347889999975444 478999999999998876554333 3334432222211 1 11111111 111 12
Q ss_pred HHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccE-EEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccc
Q 009523 407 TALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGV-VSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD 484 (532)
Q Consensus 407 ~a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~-vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~ 484 (532)
.++...+.|+. .|..+...+ ++-|.+ +|+-+++-+.....+.++|+..|+-+-.|..+....
T Consensus 313 ~~q~~~~~l~~~lp~~~~~iH----------------kpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl 376 (417)
T COG3977 313 RVQTTIAILRRYLPEYRCLIH----------------KPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGL 376 (417)
T ss_pred HHHHHHHHHHHhcCccceeee----------------cCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCC
Confidence 23333344443 232222211 112444 456565444567788899998888888887654221
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHh
Q 009523 485 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED--FEDLKADVLQALH 530 (532)
Q Consensus 485 ~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed--~~dli~dL~~AL~ 530 (532)
+. .+.-...++|+|+--++ .+.-++.|.+..+
T Consensus 377 -~~-------------ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve 410 (417)
T COG3977 377 -DK-------------EWPHTHQCMRMNYVPEPEKIEKGVAILAEEVE 410 (417)
T ss_pred -CC-------------CCCCccceEEEecCCCHHHHHHHHHHHHHHHH
Confidence 01 11123578999987544 3444555555444
No 351
>PRK06917 hypothetical protein; Provisional
Probab=99.39 E-value=5e-10 Score=120.83 Aligned_cols=294 Identities=13% Similarity=0.149 Sum_probs=173.8
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchHHHHHHhcc----
Q 009523 197 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRIFIETVLP---- 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all-------~~G-d~VIv~~~~y~~t~~~~~~~l~---- 262 (532)
.+.++...+|.++|+++... +.+++++||++|+..+++... .+| .+|+.....|++........-.
T Consensus 70 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 70 QFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 46778888999999998754 457888999999999998542 133 5788888888884322111100
Q ss_pred --cC-----CcEEEEeCC---------------CCHHHHHHhhcC---CCeeEEEEeCCCCC-CCcccC----HHHHHHH
Q 009523 263 --KM-----GITATVIDP---------------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLVSDL 312 (532)
Q Consensus 263 --~~-----Gv~v~~vd~---------------~dle~Le~al~~---~~tklV~lesP~Np-tG~v~d----l~~I~~l 312 (532)
.+ ++.....+. .+++.++++++. +++.+|++|..... -|.+.+ +++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~l 229 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEI 229 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHH
Confidence 00 111100110 124567777752 25999999987653 345544 7899999
Q ss_pred HHhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCC--c
Q 009523 313 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGA--L 382 (532)
Q Consensus 313 a~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~--~ 382 (532)
|++||+++|+||++... +.......-.|+++ ++|.++++- ...|++++++++.+.+..... ..+.+ .
T Consensus 230 c~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~G~-~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~g 306 (447)
T PRK06917 230 CDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGAGY-TPIAATVVSDRVMEPILRGSRSIMSGHTLSA 306 (447)
T ss_pred HHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhccCC-cceEEEEEcHHHHHHHhccCcccccccCCCC
Confidence 99999999999995421 11222344578876 799998641 236777888888877653111 12222 4
Q ss_pred cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC
Q 009523 383 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 456 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~ 456 (532)
+|..+..++..++.+.. .+++..+..+++.+.|++ +|.+. ..+|.|.|+.+++..+
T Consensus 307 npl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~~ie~~~~ 368 (447)
T PRK06917 307 NPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIG------------------DVRGKGLLIGVEFVAD 368 (447)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEE------------------EEeecceEEEEEEecc
Confidence 67777777777766532 233444444555555543 22222 2356788999998421
Q ss_pred ----------HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHH
Q 009523 457 ----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLK 522 (532)
Q Consensus 457 ----------~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli 522 (532)
.+....+...+...++-+...+.. ..|...+.|||+..+ ++.+.++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~--------------------~~g~~~~~i~l~Ppl~it~~eid~~~ 428 (447)
T PRK06917 369 KKTKQPFSKSQAVASELISVAAKNGLLLYPAVAG--------------------QDGKEGDAVIIAPPMTITYSELDELL 428 (447)
T ss_pred CCcCCCCcchhHHHHHHHHHHHhCCcEEEecccc--------------------cCCCCCCEEEEECCCcCCHHHHHHHH
Confidence 123455655554444333211000 001124678887553 5566667
Q ss_pred HHHHHHHhh
Q 009523 523 ADVLQALHA 531 (532)
Q Consensus 523 ~dL~~AL~~ 531 (532)
+.|+++|++
T Consensus 429 ~~l~~~l~~ 437 (447)
T PRK06917 429 SIFAKSVEE 437 (447)
T ss_pred HHHHHHHHH
Confidence 777776653
No 352
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.38 E-value=9.1e-11 Score=126.39 Aligned_cols=286 Identities=13% Similarity=0.139 Sum_probs=163.9
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhcc--------CC------CEEEEcCCCCcchHHHHHH
Q 009523 197 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP--------AG------GHIVTTTDCYRKTRIFIET 259 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g---a~~~i~~sSG~~Ai~~al~all~--------~G------d~VIv~~~~y~~t~~~~~~ 259 (532)
.+.++...+|.++|+++.+ .+.+.+++||++|++.+++...+ .| .+||.-...|+|.......
T Consensus 88 ~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als 167 (443)
T PRK08297 88 DVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLS 167 (443)
T ss_pred CcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhh
Confidence 4556777788888988762 35788999999999999985421 12 5799999999884322111
Q ss_pred hc--c---c--CC------cEEEEe--C--C-----------CCHHHHHHhhc--CCCeeEEEEeCCCCCCCcccC----
Q 009523 260 VL--P---K--MG------ITATVI--D--P-----------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---- 305 (532)
Q Consensus 260 ~l--~---~--~G------v~v~~v--d--~-----------~dle~Le~al~--~~~tklV~lesP~NptG~v~d---- 305 (532)
.- . . +. +....+ + . .+++++++.+. .+++.+|++|......|.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~y 247 (443)
T PRK08297 168 LTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEF 247 (443)
T ss_pred hcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHH
Confidence 10 0 0 00 100001 0 0 12355566664 236999999988877777643
Q ss_pred HHHHHHHHHhCCCEEEEECCCCCC-C-----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH-H--hh
Q 009523 306 VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-L--HH 376 (532)
Q Consensus 306 l~~I~~la~~~gi~lIvDet~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-~--~~ 376 (532)
+++|.++|++||+++|.||++... - .......-.|+++ ++|.++ ++|++.+++ +.+.... . ..
T Consensus 248 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~~-i~~~~~~~~~~~~ 319 (443)
T PRK08297 248 FAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGRR-VDEVEDNVFAVSS 319 (443)
T ss_pred HHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecchH-HHHhhhhhccCcc
Confidence 889999999999999999996432 1 1122334578887 789985 356665543 2221111 1 01
Q ss_pred hcCCC--ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEE
Q 009523 377 VLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 452 (532)
Q Consensus 377 ~~G~~--~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~ 452 (532)
..+++ .+|..+.+++..++.+.. .+++..+..+++.+.|++... .+|.+ ....+|.|.|+.++
T Consensus 320 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~---------~~~vrg~G~~~~i~ 386 (443)
T PRK08297 320 RINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAA----EFPAV---------VSNVRGRGLMCAFD 386 (443)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----HCCCc---------ceeeeccceEEEEE
Confidence 12222 467776666666665432 233444444455554543200 01211 01224578899999
Q ss_pred EcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHH
Q 009523 453 VDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQA 528 (532)
Q Consensus 453 l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~A 528 (532)
+.. ......+...+...|+-+..+ ..+.+||+..+ ++.+.+++.|+++
T Consensus 387 ~~~-~~~~~~~~~~l~~~Gvl~~~~---------------------------~~~~lr~~P~l~~t~~eid~~l~~l~~~ 438 (443)
T PRK08297 387 LPT-TADRDEVIRRLWEEGVLVLPC---------------------------GERSIRFRPALTVTTEEIDAAIDALRRA 438 (443)
T ss_pred ecC-HHHHHHHHHHHHHCCEEEecC---------------------------CCCeEEEECCccCCHHHHHHHHHHHHHH
Confidence 964 344556666665445433211 12457886554 4556666666666
Q ss_pred Hhh
Q 009523 529 LHA 531 (532)
Q Consensus 529 L~~ 531 (532)
|..
T Consensus 439 l~~ 441 (443)
T PRK08297 439 LPE 441 (443)
T ss_pred HHh
Confidence 654
No 353
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=8.8e-11 Score=116.81 Aligned_cols=251 Identities=19% Similarity=0.217 Sum_probs=163.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc------c--CCC--EEEEcCCCCcc-hHH---------HHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV------P--AGG--HIVTTTDCYRK-TRI---------FIET 259 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all------~--~Gd--~VIv~~~~y~~-t~~---------~~~~ 259 (532)
|....++++.+++++|.+.++-+++|.||.+.++.-.. + |.| .|+.....|++ |.. -+..
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 44566789999999999999999999999999886432 1 323 45555666655 111 1111
Q ss_pred hcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC------
Q 009523 260 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------ 329 (532)
Q Consensus 260 ~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~------ 329 (532)
+-.-....+..++-.|.++|+.+++..+++++++|..+..-|.+.| ++++.++|.+|++++|.||++...
T Consensus 180 fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~ 259 (427)
T KOG1402|consen 180 FGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKL 259 (427)
T ss_pred cCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcE
Confidence 1111111256677789999999998878999999999999999987 889999999999999999996431
Q ss_pred CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHHHHHHHHHHHH
Q 009523 330 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLHLRVQQQNST 407 (532)
Q Consensus 330 ~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~ 407 (532)
+..+....-.|+++ +.|.++|+--...+ ++++++++-.++... ..+|+ +|+.+..+...++.+.+ ++..++
T Consensus 260 la~d~env~PDivi--lgKalSGG~~Pvsa-vl~~~~im~~~~pgeHgsTygg--NpLg~~vaiAalevi~e--ekL~er 332 (427)
T KOG1402|consen 260 LACDYENVRPDIVI--LGKALSGGVYPVSA-VLADDDIMLNIKPGEHGSTYGG--NPLGCAVAIAALEVIVE--EKLVER 332 (427)
T ss_pred EEeehhhcCCCeEE--EeccccCCeeeeEE-EEecHHHHhccCCCccccccCC--ChHHHHHHHHHHHHHHH--HHHHHH
Confidence 22333344679999 88999976433344 455666665554322 22333 67777777777776543 455666
Q ss_pred HHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCC
Q 009523 408 ALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIP 470 (532)
Q Consensus 408 a~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~---~~~~~~~l~~L~~~ 470 (532)
+..|.+.|. +.+. ..|+ +.+..+|.|.+..+++... ..++-...-.++..
T Consensus 333 a~~lG~~l~~~L~~l~~----~~p~---------~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~ 389 (427)
T KOG1402|consen 333 AAKLGEILRDQLNKLQK----KFPH---------VVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKEN 389 (427)
T ss_pred HHHHHHHHHHHHHhccc----cccc---------hhheeeccceEEEEEeccccccchhHHHHHHccccc
Confidence 666655544 3321 1222 1233467788888888632 23344444444443
No 354
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.35 E-value=4.8e-11 Score=125.67 Aligned_cols=225 Identities=18% Similarity=0.226 Sum_probs=145.6
Q ss_pred CCchhHHHHHH----HHHhhhCCC---------cEEEeCCHHHHHHHHHHHhcc--------CC-----C-EEEEcCCCC
Q 009523 198 YGNPTTVVVEE----KMSALEGAE---------STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCY 250 (532)
Q Consensus 198 ~~~p~~~~Le~----~lA~l~ga~---------~~i~~sSG~~Ai~~al~all~--------~G-----d-~VIv~~~~y 250 (532)
...|....+|+ .+++++|.+ ..+++++|++++..++.+..+ .| . .|++++..|
T Consensus 72 ~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH 151 (373)
T PF00282_consen 72 EASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAH 151 (373)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-
T ss_pred ccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccc
Confidence 34577766764 555666655 378999999998877754321 12 2 577777788
Q ss_pred cchHHHHHHhcccCCcEEEEeCCC-----CHHHHHHhhcCC----C-eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEE
Q 009523 251 RKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN----N-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 320 (532)
Q Consensus 251 ~~t~~~~~~~l~~~Gv~v~~vd~~-----dle~Le~al~~~----~-tklV~lesP~NptG~v~dl~~I~~la~~~gi~l 320 (532)
.+.. ..+..+|+.++.++.+ |+++|++++++. + +-+|+....+..+|.+-|+++|+++|+++++++
T Consensus 152 ~S~~----Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wl 227 (373)
T PF00282_consen 152 YSIE----KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWL 227 (373)
T ss_dssp THHH----HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EE
T ss_pred cHHH----HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceee
Confidence 7744 4556667777777543 788888877531 2 336666777888999999999999999999999
Q ss_pred EEECCCCCCCcc----cccc---cCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHH----HHhh------------
Q 009523 321 CIDGTFATPLNQ----KALS---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIR----NLHH------------ 376 (532)
Q Consensus 321 IvDet~a~~~~~----~~l~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~----~~~~------------ 376 (532)
+||++|+..... +... ..+|-+..++||+++-+-+ .|+++.++ ....... .+..
T Consensus 228 HVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~ 305 (373)
T PF00282_consen 228 HVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDY 305 (373)
T ss_dssp EEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCE
T ss_pred eecccccccccccccccccccccccccccccchhhhhcCCcc--ceeEEeecccchHHHhccChhhhccccccccccccc
Confidence 999998873221 2222 2579999999999997753 56666544 3332211 0000
Q ss_pred ----hcCCC-ccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCC
Q 009523 377 ----VLGGA-LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPG 428 (532)
Q Consensus 377 ----~~G~~-~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pg 428 (532)
..++. ...+..|..++ |.+.+..++++..+.++++++.|++.+.++.+.-|.
T Consensus 306 ~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~ 364 (373)
T PF00282_consen 306 GDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPD 364 (373)
T ss_dssp EEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTS
T ss_pred ccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 00111 12345665554 667788899999999999999999999876554443
No 355
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.35 E-value=6.3e-11 Score=132.05 Aligned_cols=172 Identities=13% Similarity=0.148 Sum_probs=127.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
+.....+.++..|+++|++...++.+|+ .+|.+++++++++||.|++++++|.+.+. .+...|+..+++.+.
T Consensus 193 ~~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~----aLilsga~PVYl~P~~n~ 268 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH----LLMMSDVVPIWLKPTRNA 268 (713)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeeEEecccccc
Confidence 4455677899999999999999999997 88999999999999999999999998664 344567777776532
Q ss_pred -------C-----HHHHHHhhcCC----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEE-EEECCCCCCCcccc---
Q 009523 275 -------D-----MEGLEAALNNN----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV-CIDGTFATPLNQKA--- 334 (532)
Q Consensus 275 -------d-----le~Le~al~~~----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~l-IvDet~a~~~~~~~--- 334 (532)
+ .+.++++++++ +++++++.+|+ ..|.+.|+++|+++| |+.+ ++||+|+....+.+
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~ 344 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQ 344 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccC
Confidence 2 38888888653 23688888886 789999999999998 6666 69999876432222
Q ss_pred ----ccc--CCcEE---EECCccccCCCCCcEEEEEEeChHH-HHHHHHHhhhcCC
Q 009523 335 ----LSL--GADLV---LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGG 380 (532)
Q Consensus 335 ----l~~--gaDiv---v~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~~~~~G~ 380 (532)
+.. |+|.+ +.|.||.+++.+ .+.++-.+..+ .++++.....+.+
T Consensus 345 ~~sam~~~~~aD~~i~~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~S 398 (713)
T PRK15399 345 GKSGMSGERVPGKVIFETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTS 398 (713)
T ss_pred CcChhhCCCCCCeeeeeeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcC
Confidence 222 57877 999999999876 45565544332 2445554444443
No 356
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.34 E-value=6.3e-10 Score=126.92 Aligned_cols=238 Identities=15% Similarity=0.166 Sum_probs=146.2
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhcc---------------------CCCEEEEcCCCCcc
Q 009523 197 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP---------------------AGGHIVTTTDCYRK 252 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all~---------------------~Gd~VIv~~~~y~~ 252 (532)
.+.++...+|.++|.+..+. +.+++++||++|++.+++...+ ...+||.-...|+|
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG 484 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHG 484 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCC
Confidence 45677788899999887652 4688889999999998874421 12369999999988
Q ss_pred h-HHHHHHh--------c-cc----CCcEE----EE---------eCCC-------------------------------
Q 009523 253 T-RIFIETV--------L-PK----MGITA----TV---------IDPA------------------------------- 274 (532)
Q Consensus 253 t-~~~~~~~--------l-~~----~Gv~v----~~---------vd~~------------------------------- 274 (532)
. ...+... . .. .+..+ .. ++..
T Consensus 485 ~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 564 (817)
T PLN02974 485 DTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKA 564 (817)
T ss_pred CCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHH
Confidence 2 2111100 0 00 01000 00 0000
Q ss_pred CHHHHHHhhc-------CCCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC------Ccccccc
Q 009523 275 DMEGLEAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALS 336 (532)
Q Consensus 275 dle~Le~al~-------~~~tklV~lesP-~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~------~~~~~l~ 336 (532)
..+.+++.|+ ..++.+|++|.. .+-.|.+.+ +++|.++|++||+++|.||++... +..+.+.
T Consensus 565 ~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 565 YRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC
Confidence 0145666664 236899999985 566677764 789999999999999999996432 2233344
Q ss_pred cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH----hhhcC--CCccHHHHHHHHHhHHHHHHH--HHHHHHHH
Q 009523 337 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLG--GALNPNAAYLIIRGMKTLHLR--VQQQNSTA 408 (532)
Q Consensus 337 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~G--~~~~~~~a~l~l~~l~tl~~r--~~~~~~~a 408 (532)
.-.||++ +.|.++|+- +..|++++++++.+.+..- ...+| ...+|..+..++..++.+... .+...++.
T Consensus 645 v~PDIi~--~gKgLtgG~-~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~ 721 (817)
T PLN02974 645 CKPDIAC--YAKLLTGGL-VPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPG 721 (817)
T ss_pred CCCCEEe--ecccccCCC-CccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 4579998 889998752 3467778888888876421 01122 234688888877777765431 11222333
Q ss_pred HHHH--------HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 409 LRMA--------KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 409 ~~la--------~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
.++. +.|.++|.|..| +|.|.|+.+++..
T Consensus 722 ~~l~~~l~~~l~~~l~~~p~V~~V------------------Rg~Gl~~~iel~~ 758 (817)
T PLN02974 722 SRLRELWDEELVRAISSLPNVERV------------------VSLGTVLALELDA 758 (817)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEE------------------EeeeeEEEEEEec
Confidence 3332 223445555444 4578899999964
No 357
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.32 E-value=3.9e-10 Score=115.25 Aligned_cols=284 Identities=15% Similarity=0.138 Sum_probs=151.9
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHH-HHHHHHH-HHhcc--C----------CCEEEEcCCCCcchHHHHHHhcccC
Q 009523 201 PTTVVVEEKMSALEGA--ESTVIMASGM-SASTVML-LALVP--A----------GGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--~~~i~~sSG~-~Ai~~al-~all~--~----------Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
....++++.+|+++|. +++|+..+.+ .-+.-++ .+++. + .=+.+++-|.|-... .+.+.+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF----ai~E~~ 144 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF----AITEHF 144 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH----HHHHHC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH----HHHHhh
Confidence 3567889999999997 4566665555 2222222 12211 1 126899999997654 356778
Q ss_pred CcEEEEeCC----CCHHHHHHhhc-CCCeeEEEEeCC--CCCCCcccCHHHHHHHHH----hCCCEEEEECCCCCCCcc-
Q 009523 265 GITATVIDP----ADMEGLEAALN-NNNVSLFFTESP--TNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLNQ- 332 (532)
Q Consensus 265 Gv~v~~vd~----~dle~Le~al~-~~~tklV~lesP--~NptG~v~dl~~I~~la~----~~gi~lIvDet~a~~~~~- 332 (532)
|++...|+. .|++.+|+++. +..+|.||+ .| +||||.++.-+.+.++|. ..+..++.||+|+.....
T Consensus 145 Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWc-VP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~ 223 (425)
T PF12897_consen 145 GIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWC-VPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYD 223 (425)
T ss_dssp T-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE--SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSS
T ss_pred CcEEEecCCCCCCCCHHHHHHHHhcCCccceEEe-CCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccc
Confidence 999988864 38999999984 336899997 55 499999999777777763 468999999998765331
Q ss_pred --------cccc----c---CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC---ccHHHHHHHHHhH
Q 009523 333 --------KALS----L---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA---LNPNAAYLIIRGM 394 (532)
Q Consensus 333 --------~~l~----~---gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~---~~~~~a~l~l~~l 394 (532)
+.+. . +..+++.|+||.--++++ .+++.++++-++.+++......-. ++++.-...++..
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG--va~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~ 301 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAG--VAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDA 301 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS---EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSH
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcc--eeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcCh
Confidence 1111 1 234788899996544432 578888887777766544333222 2222222233344
Q ss_pred H-HHHHHHHHHHHH----HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009523 395 K-TLHLRVQQQNST----ALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 465 (532)
Q Consensus 395 ~-tl~~r~~~~~~~----a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~ 465 (532)
+ .+...|++|.+. .+.+.+.|+++ .++..+..|. +|.+|+|++..+ .+.+.++
T Consensus 302 ~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~----------------GGYFIsld~~~G--~AkrvV~ 363 (425)
T PF12897_consen 302 EGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK----------------GGYFISLDVLDG--TAKRVVE 363 (425)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S----------------BSS-EEEEESTT---HHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC----------------CceEEEEecCCC--hHHHHHH
Confidence 4 455566666533 22333444432 2466666664 678999998763 4567777
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 526 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~ 526 (532)
..+..|+.....|. ..|..- .-.+..|||.-.....+++-.+++
T Consensus 364 lakeAGV~LT~AGA----tfPyg~-------------DP~D~nIRiAPS~P~leel~~Am~ 407 (425)
T PF12897_consen 364 LAKEAGVALTPAGA----TFPYGK-------------DPRDSNIRIAPSYPSLEELETAMD 407 (425)
T ss_dssp HHHHTTEE---TTT----TSGGG---------------TTS-EEEE--SSS-HHHHHHHHH
T ss_pred HHHHhCceeCCCCC----CCCCCC-------------CCCCCcEEecCCCCCHHHHHHHHH
Confidence 77777776655332 123210 113679999999988877655544
No 358
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.32 E-value=1.2e-10 Score=125.46 Aligned_cols=280 Identities=11% Similarity=0.050 Sum_probs=160.6
Q ss_pred CCchhHHHHHHHHHh----hhC--CCcEEEeCCHHHHHHHHHHHhcc--------------------------CC---CE
Q 009523 198 YGNPTTVVVEEKMSA----LEG--AESTVIMASGMSASTVMLLALVP--------------------------AG---GH 242 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~----l~g--a~~~i~~sSG~~Ai~~al~all~--------------------------~G---d~ 242 (532)
+.++....|.++|++ +.. .+.+++++||++|+..+++.... +| .+
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 567777777777754 443 25788889999999999875421 11 26
Q ss_pred EEEcCCCCcchHHHHHHhc-----ccCCc---EEEEeCC-------------------CCHHHHHHhhcC--CCeeEEEE
Q 009523 243 IVTTTDCYRKTRIFIETVL-----PKMGI---TATVIDP-------------------ADMEGLEAALNN--NNVSLFFT 293 (532)
Q Consensus 243 VIv~~~~y~~t~~~~~~~l-----~~~Gv---~v~~vd~-------------------~dle~Le~al~~--~~tklV~l 293 (532)
||.....|++......... ...+. .+..++. .+++++++++++ .++.+|++
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~ 257 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV 257 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 9999999988432211110 00011 1111110 135667777743 26999999
Q ss_pred eCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC------CcccccccC--CcEEEECCccccCCCCCcEEEEE
Q 009523 294 ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLG--ADLVLHSATKFIGGHNDVLAGSI 361 (532)
Q Consensus 294 esP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~------~~~~~l~~g--aDivv~S~sK~lgg~gd~~gG~l 361 (532)
|......|.+.+ +++|.++|++||+++|+||++... +........ .|+++ ++|.+++. |++
T Consensus 258 EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g-----G~~ 330 (464)
T TIGR00699 258 EPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA-----GYF 330 (464)
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC-----Ccc
Confidence 999888898887 899999999999999999995321 112222222 78877 78999633 333
Q ss_pred EeChHHHHHHHHHhhhcCC--CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CC-CceEEeCCCCCCC
Q 009523 362 SGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HP-KVKRVHYPGLKSH 432 (532)
Q Consensus 362 v~~~~li~~l~~~~~~~G~--~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p-~v~~V~~Pgl~s~ 432 (532)
++++ .+..... ...++ ..+|..+..++..++.+.. ..++..+..+++.+.|++ +| .|..|..
T Consensus 331 ~~~~-~~~~~~~--~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg------ 401 (464)
T TIGR00699 331 FHDP-AFRPNKP--YRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRG------ 401 (464)
T ss_pred ccch-hccCCCC--cccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc------
Confidence 3332 2111001 11222 2356666666666665532 112222223444444443 33 2222210
Q ss_pred chhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE
Q 009523 433 PEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS 512 (532)
Q Consensus 433 p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS 512 (532)
.|.|.|+.++++. .....++++.+...|+-+... ..+.|||.
T Consensus 402 ----------~G~Glm~gie~~~-~~~~~~i~~~~~~~Gvl~~~~---------------------------g~~~ir~~ 443 (464)
T TIGR00699 402 ----------KGRGTFIAWDTPD-EAKRDKLLKKARNNGVNIGGC---------------------------GVKAIRLR 443 (464)
T ss_pred ----------cCeEEEEEEecCC-HHHHHHHHHHHHHCCcEEecC---------------------------CCCeEEEe
Confidence 1578899999964 344566776665545433210 13678998
Q ss_pred ecCCCHHHHHHHHHHHHhh
Q 009523 513 FGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 513 vG~ed~~dli~dL~~AL~~ 531 (532)
..+--.++.++.+.++|++
T Consensus 444 Ppl~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 444 PMLVFQKHHADIFLEIISK 462 (464)
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 8776666666666666553
No 359
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.32 E-value=3.2e-10 Score=112.93 Aligned_cols=161 Identities=19% Similarity=0.249 Sum_probs=116.8
Q ss_pred HHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcch-HHHHHHhcccCCcEEEEeCCCCHH
Q 009523 203 TVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKT-RIFIETVLPKMGITATVIDPADME 277 (532)
Q Consensus 203 ~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t-~~~~~~~l~~~Gv~v~~vd~~dle 277 (532)
-+.|-.+||-+.|+ .+++++.+-+--++-++.+.+ ++|+.||+++-.-.++ +...+......++.....-.+.++
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 35577888999997 345555544455556666554 3588888876544443 322323333334332222234678
Q ss_pred HHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCccccCCCCCc
Q 009523 278 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDV 356 (532)
Q Consensus 278 ~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~lgg~gd~ 356 (532)
++++++++ ++.+|++.+.+--||...|+.+|.+++|++|++++-|=+++.+ ++.+.-..|+|+-|.+.+||++|+.+.
T Consensus 158 ~~~~~~~d-d~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 158 ALEEAITD-DVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred HHHHhhcc-ceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCC
Confidence 99999988 7999999999888999999999999999999999999997665 455666789999999999999988767
Q ss_pred EEEEEEeC
Q 009523 357 LAGSISGS 364 (532)
Q Consensus 357 ~gG~lv~~ 364 (532)
.+|+.+.+
T Consensus 237 pa~l~v~~ 244 (407)
T COG3844 237 PAGLFVAP 244 (407)
T ss_pred ceeEEecc
Confidence 77776654
No 360
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.31 E-value=7.3e-11 Score=121.87 Aligned_cols=187 Identities=22% Similarity=0.320 Sum_probs=134.1
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCc--chHHHHHHhcccCCcEEEEeCC---CCHHHH
Q 009523 205 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYR--KTRIFIETVLPKMGITATVIDP---ADMEGL 279 (532)
Q Consensus 205 ~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~--~t~~~~~~~l~~~Gv~v~~vd~---~dle~L 279 (532)
.+.+.++.+.|++++.++++-+.|+..++.++.+ +.+||++...-- +.. -+...++..|.++..+.. ....++
T Consensus 72 ~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~-~v~d~~~~aG~~l~EvG~tn~t~~~d~ 149 (395)
T COG1921 72 ELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAF-RVPDIIRLAGAKLVEVGTTNRTHLKDY 149 (395)
T ss_pred HHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCC-ChhHHHHHcCCEEEEecccCcCCHHHH
Confidence 4566667777788999999999999999888876 556665532111 111 133456667888777753 368899
Q ss_pred HHhhcCCCeeEEEEeCCCC-CCCcccCHHHHHHHHHhCCCEEEEECCCCCC-----CcccccccCCcEEEECCccccCCC
Q 009523 280 EAALNNNNVSLFFTESPTN-PFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGGH 353 (532)
Q Consensus 280 e~al~~~~tklV~lesP~N-ptG~v~dl~~I~~la~~~gi~lIvDet~a~~-----~~~~~l~~gaDivv~S~sK~lgg~ 353 (532)
+.+|.+ +|++++=..-+| +.-...+.++++++||++|+++++|.+-+.. -....+..|+|+|++|..|.|||+
T Consensus 150 ~~AIne-~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGP 228 (395)
T COG1921 150 ELAINE-NTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGP 228 (395)
T ss_pred HHHhcc-CCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCC
Confidence 999998 466555433333 2223457889999999999999999986543 224456789999999999999998
Q ss_pred CCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH
Q 009523 354 NDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 397 (532)
Q Consensus 354 gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl 397 (532)
. +|+++|++++++++++..-..+...+......+.+.++.+
T Consensus 229 q---aGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y 269 (395)
T COG1921 229 Q---AGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALELY 269 (395)
T ss_pred c---cceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHH
Confidence 5 9999999999999987665556556655555555555544
No 361
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.31 E-value=3e-10 Score=115.59 Aligned_cols=261 Identities=18% Similarity=0.209 Sum_probs=164.5
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCCcchHHHHHHh--ccc--C
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETV--LPK--M 264 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~al-l~~G-d~VIv~~~~y~~t~~~~~~~--l~~--~ 264 (532)
|...-|-+|...++.++|++.+.. ..+++++||++|++++++.. +-.| -+||.-+..|++....-..+ +.. .
T Consensus 84 H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~ 163 (442)
T KOG1404|consen 84 HTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQ 163 (442)
T ss_pred EeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccc
Confidence 556667788888888888888765 45788899999999988744 2222 36888888888843211000 110 0
Q ss_pred ---Cc--EEEEeC-CC--------C---------HHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 265 ---GI--TATVID-PA--------D---------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 265 ---Gv--~v~~vd-~~--------d---------le~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
+. .+.... ++ + .++++..+. +.++.+.+.|+.....|.+.+ +++..++|+
T Consensus 164 ~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 164 NFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred cCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 01 011111 10 1 234444442 236889999999988888875 889999999
Q ss_pred hCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh---hhcCCCccHH
Q 009523 315 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPN 385 (532)
Q Consensus 315 ~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~~~~~~ 385 (532)
++|.++|.||++... +.++....-.||+. +.|.+|.+ ...|.++..+++.+.+.+.. ..+|+ +|.
T Consensus 244 k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvT--mAKgiGnG--~Pl~AVvtt~EIa~v~~~~~~~fnTygg--nP~ 317 (442)
T KOG1404|consen 244 KRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVT--MAKGIGNG--FPLGAVVTTPEIADVLNQKSSHFNTYGG--NPV 317 (442)
T ss_pred HcCCEEEehhhhhccccccccccccccCCCccHHH--HHhhccCC--CcceeeecCHHHHHHHHhccccccccCC--Cch
Confidence 999999999995431 22232333356765 99999866 35677778888888776533 23343 677
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--------CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH
Q 009523 386 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEA--------HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 457 (532)
Q Consensus 386 ~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~--------~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~ 457 (532)
.+...+..++-+.+ ++..+|+..+..+|.+ +|-|.. .+|.|.|+.+|+-++.
T Consensus 318 a~avg~aVL~Vike--e~LqE~aa~vG~yl~~~l~~l~d~h~iIGd------------------VRG~GLm~GvE~V~dk 377 (442)
T KOG1404|consen 318 ACAVGLAVLKVIKE--ENLQENAAEVGSYLLEKLAALKDKHPIIGD------------------VRGRGLMLGVELVSDK 377 (442)
T ss_pred hHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHhhcCCceee------------------cccceeEEEEEEeccc
Confidence 77776666665443 4566777766666543 233322 2678899999986432
Q ss_pred --------HHHHHHHHHcCCCceeecCCCc
Q 009523 458 --------TATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 458 --------~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
.....+.+.++..|+-+.-|+.
T Consensus 378 ~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i 407 (442)
T KOG1404|consen 378 SEPKPPATAEGAVIGEQCKELGVLVGKGGI 407 (442)
T ss_pred CCCCCcchHHHHHHHHHHHHhCeeeecccc
Confidence 2345566666666666655543
No 362
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.28 E-value=7e-10 Score=116.62 Aligned_cols=249 Identities=14% Similarity=0.156 Sum_probs=151.8
Q ss_pred hhHHHHHHHHHhhhCCC--c-E-EEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHHhcccCCc-EEEEeCC-
Q 009523 201 PTTVVVEEKMSALEGAE--S-T-VIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDP- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~-~-i~~sSG~~Ai~~al~all-~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv-~v~~vd~- 273 (532)
....+.++.|.++++.+ . + ++.+||+.++++++..++ ++||++++.. .|+. ++..+.++.+|+ ++..++.
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~--r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK--GWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH--HHHHHHHHhcCCCCcEEEcCC
Confidence 34556688888888853 2 3 456889999999999999 5898888754 4433 233356777888 4665543
Q ss_pred ----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCcc
Q 009523 274 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 348 (532)
Q Consensus 274 ----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK 348 (532)
.|+++++. ++ . |++.+--..||...|++++.+.. +++++|||.+-+.+ .+.+.. ++|+++.|..|
T Consensus 116 ~g~~~~~~~ve~--~~-~---v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK 185 (374)
T TIGR01365 116 YGKLPDLKKVDF--KN-D---VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDVVTFSWQK 185 (374)
T ss_pred CCCCCCHHHcCC--CC-C---EEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcEEEEechh
Confidence 26777762 22 2 33433334579999987666332 58999999994332 222222 49999999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHH---------hh----------hc-CCC---ccHHHHHHHHHhHH------HHHH
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNL---------HH----------VL-GGA---LNPNAAYLIIRGMK------TLHL 399 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~---------~~----------~~-G~~---~~~~~a~l~l~~l~------tl~~ 399 (532)
.++++++ .++++.+++.+++.... .. .. +.+ ++....+.+...++ .++.
T Consensus 186 ~L~~ppG--ls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~ 263 (374)
T TIGR01365 186 VLGGEGA--HGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKP 263 (374)
T ss_pred ccCCCCc--eEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHH
Confidence 9998863 56777788777654421 00 01 212 22223333333342 2677
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH-----H-----HHHHHHHcCC
Q 009523 400 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT-----A-----TIKFIDALKI 469 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~-----~-----~~~~l~~L~~ 469 (532)
+.+++.++++.+.+++++.+.+. + ++ .++.+ ....++.+.++.+.. . ...|.+.++.
T Consensus 264 ~~~Rh~~~a~~l~~~l~~lg~l~-~-~~---~~~~~--------rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 330 (374)
T TIGR01365 264 LIARADDNLAVLEAFVAKNNWIH-F-LA---ETPEI--------RSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEK 330 (374)
T ss_pred HHHHHHHHHHHHHHHHHHCCCcc-c-CC---CChhh--------cCCCeEEEEeCCccccccccchhhHHHHHHHHHHHH
Confidence 88899999999999999875322 1 11 10111 123456677743211 2 4667777766
Q ss_pred CceeecCC
Q 009523 470 PYIAPSFG 477 (532)
Q Consensus 470 ~~i~vs~G 477 (532)
.++.+..|
T Consensus 331 ~gi~i~~G 338 (374)
T TIGR01365 331 EGVAYDIG 338 (374)
T ss_pred CCEEEecc
Confidence 56655544
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.26 E-value=9e-10 Score=118.39 Aligned_cols=211 Identities=16% Similarity=0.188 Sum_probs=126.0
Q ss_pred hHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc-cCC-CEEEEc-CCCCcchHHHHHH-hcccCCc------EEEE
Q 009523 202 TTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV-PAG-GHIVTT-TDCYRKTRIFIET-VLPKMGI------TATV 270 (532)
Q Consensus 202 ~~~~Le~~lA~l~g-a~~~i~~sSG~~Ai~~al~all-~~G-d~VIv~-~~~y~~t~~~~~~-~l~~~Gv------~v~~ 270 (532)
...+|.++|+++.. .+.+.+++||++|+..+++... -.| .+|+.. ...|++....+.. .....+. .+..
T Consensus 89 ~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~ 168 (431)
T PRK06209 89 IELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT 168 (431)
T ss_pred HHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccc
Confidence 33467888888874 4678899999999999988432 134 345554 3334331111100 0000111 1233
Q ss_pred eCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc------cccccCCcEE
Q 009523 271 IDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLGADLV 342 (532)
Q Consensus 271 vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~------~~l~~gaDiv 342 (532)
++..|+++|+++++. .++.+|++|......+..-.+++|.++|++||+++|+||++. ++.. ......+|++
T Consensus 169 ~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~PDi~ 247 (431)
T PRK06209 169 FRYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDLS 247 (431)
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCccee
Confidence 456689999998853 258899998876443333348999999999999999999863 2211 1123346775
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHH--HHHH--hh--hcCCCc--cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQ--IRNL--HH--VLGGAL--NPNAAYLIIRGMKTLHL--RVQQQNSTALRMA 412 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~--l~~~--~~--~~G~~~--~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la 412 (532)
+ ++|.+|++ ..+|++++++++++. +... .. .++.+. +|..+..++..++.+.. .+++..++.+++.
T Consensus 248 t--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 323 (431)
T PRK06209 248 C--FGKALGNG--FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLA 323 (431)
T ss_pred e--ehhhhcCC--cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 5 89999974 357888888888775 2111 11 133333 45666666666665532 2344445555555
Q ss_pred HHHHh
Q 009523 413 KILEA 417 (532)
Q Consensus 413 ~~L~~ 417 (532)
+.|++
T Consensus 324 ~~L~~ 328 (431)
T PRK06209 324 AGVNE 328 (431)
T ss_pred HHHHH
Confidence 55543
No 364
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.26 E-value=8.2e-10 Score=118.90 Aligned_cols=158 Identities=23% Similarity=0.332 Sum_probs=122.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
.....+.++..|+.+|+++..+..+|+ .|+..++++++++||.|++++++|.+.... +-..|...+++.+
T Consensus 69 ~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~g----lilaGa~Pvyl~p~~np~ 144 (557)
T COG1982 69 EGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHG----LILAGATPVYLEPSRNPL 144 (557)
T ss_pred CccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHH----HHHcCCceEEecCCCCcc
Confidence 345677899999999999999998888 899999999999999999999999886543 3334666555542
Q ss_pred ------CCHHHHHHhhcCC-Ce-eEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC------cccccccCC
Q 009523 274 ------ADMEGLEAALNNN-NV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLGA 339 (532)
Q Consensus 274 ------~dle~Le~al~~~-~t-klV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~------~~~~l~~ga 339 (532)
.+.+.+++++.++ .. |++++.+|+ ..|.+.++++|.+.++++++++.+|++..... +....+.|+
T Consensus 145 ~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~ 223 (557)
T COG1982 145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGA 223 (557)
T ss_pred ccccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCc
Confidence 2678888877543 34 788887776 67999999999999999999999999954322 222334689
Q ss_pred cEEEECCccccCCCCCcEEEEEEeC
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGS 364 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~ 364 (532)
|+++.|.||.+++.+ .+-++-.+
T Consensus 224 ~~~tqS~HK~l~alS--QaS~iHv~ 246 (557)
T COG1982 224 DFVTQSTHKLLAALS--QASMIHVK 246 (557)
T ss_pred eEEEechhhhhhhhh--hhHHHhhC
Confidence 999999999999765 34444443
No 365
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.24 E-value=1.3e-09 Score=124.54 Aligned_cols=161 Identities=20% Similarity=0.258 Sum_probs=120.6
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-c--cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 204 VVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-V--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 204 ~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al-l--~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
-+++..++++.|.+ .+-++..++++.++++++. . +++++|++++..|+.+...++..++..|++++.++ +++
T Consensus 112 ~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~~ 188 (939)
T TIGR00461 112 LNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CSD 188 (939)
T ss_pred HHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HHH
Confidence 34678899999976 4567777776666665553 2 23489999999999998888777888999998875 566
Q ss_pred HHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCC-CCcccccccCCcEEEECCccccCCC--CC
Q 009523 279 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGH--ND 355 (532)
Q Consensus 279 Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~-~~~~~~l~~gaDivv~S~sK~lgg~--gd 355 (532)
|++.+ ++..|++.+|+ -+|.+.|+++|++++|++|++++++.-... .+...|-++|+||++.+..++.-++ |+
T Consensus 189 l~~~~---~~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GG 264 (939)
T TIGR00461 189 IKKAV---DVFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGG 264 (939)
T ss_pred HhhcC---CEEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCC
Confidence 76665 37889998887 689999999999999999999999665333 3456788999999988766543311 11
Q ss_pred cEEEEEEeChHHHHHH
Q 009523 356 VLAGSISGSGKLVTQI 371 (532)
Q Consensus 356 ~~gG~lv~~~~li~~l 371 (532)
.-+|++..++++...+
T Consensus 265 P~aG~~a~~~~l~r~l 280 (939)
T TIGR00461 265 PHAAFFAVKDEYNRKM 280 (939)
T ss_pred CceeeeeecHhhHhhC
Confidence 2378888877665543
No 366
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=2.5e-10 Score=115.96 Aligned_cols=185 Identities=17% Similarity=0.168 Sum_probs=138.4
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHH
Q 009523 201 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 280 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le 280 (532)
..+-.||+.||+++|.+++++++-|-+++..++.++.+.||.|++......+.. ..++...-.+.++..+|+++++
T Consensus 139 DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq----~GlqlSRS~i~~Fkhndm~~le 214 (467)
T KOG1358|consen 139 DVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQ----KGLQLSRSTISYFKHNDMEDLE 214 (467)
T ss_pred eeecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHH----HHHhhhhheeEEecCCCHHHHH
Confidence 345679999999999999999999999999999999999999999887766544 3334344567788899999998
Q ss_pred HhhcCCC------------eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc----------ccccC
Q 009523 281 AALNNNN------------VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----------ALSLG 338 (532)
Q Consensus 281 ~al~~~~------------tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~----------~l~~g 338 (532)
..+.+.. -+.|++|...-++|.+.|+.+|.++..+|...+++|+++..+..-+ .-...
T Consensus 215 rll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~ 294 (467)
T KOG1358|consen 215 RLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITD 294 (467)
T ss_pred HhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccc
Confidence 8775421 3678889999899999999999999999999999999976543211 11124
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHH--HHHHHHhhhcCCCccHHHHHHHHHh
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLV--TQIRNLHHVLGGALNPNAAYLIIRG 393 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li--~~l~~~~~~~G~~~~~~~a~l~l~~ 393 (532)
+|+++.|+.-.++.. ||+.+|+.-++ +++......+...+.|..+-.+...
T Consensus 295 iDiv~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~a 347 (467)
T KOG1358|consen 295 IDIVTASMETALASG----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKA 347 (467)
T ss_pred eeeeeeccccccccc----CceeecceeeEeeeeccccceeeeccCchhhhhhHHHH
Confidence 689999999888865 57777754322 4444444455556666554444333
No 367
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.22 E-value=8.7e-10 Score=116.06 Aligned_cols=238 Identities=19% Similarity=0.147 Sum_probs=148.6
Q ss_pred ccccccc-cCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEc
Q 009523 169 VNTSAYF-FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTT 246 (532)
Q Consensus 169 ~~sst~~-~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~-~Gd~VIv~ 246 (532)
.+|.|.+ -++.++..+...+ .-.|+ ++|+..+|++.+++++|.+.++.+.+|..+...++..+++ +||++++.
T Consensus 46 LrSDTgT~apS~~m~aAM~~G---DD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~ 120 (467)
T TIGR02617 46 LLTDSGTGAVTQSMQAAMMRG---DEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_pred CccCCCCCCCCHHHHHHHHcC---Ccccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccccccccccc
Confidence 3455665 3666666665542 22344 7899999999999999999999999999999999888888 78877754
Q ss_pred CC-------CCcchHHHHHHhcccCCcEEEEe--------------C-CCCHHHHHHhhcC---CCeeEEEEeCCCCC-C
Q 009523 247 TD-------CYRKTRIFIETVLPKMGITATVI--------------D-PADMEGLEAALNN---NNVSLFFTESPTNP-F 300 (532)
Q Consensus 247 ~~-------~y~~t~~~~~~~l~~~Gv~v~~v--------------d-~~dle~Le~al~~---~~tklV~lesP~Np-t 300 (532)
.. .|..+.. ......|+.+..+ + ..|+++|+++|++ .++..+.++-.+|- -
T Consensus 121 ~~~~~v~hn~~fett~---g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~G 197 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQ---GHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAG 197 (467)
T ss_pred ccccccceEEEEecch---HHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCC
Confidence 43 1222110 1122234443322 1 1289999999975 23344444333343 4
Q ss_pred CcccC---HHHHHHHHHhCCCEEEEECC--C--C----------CCCccccc----ccCCcEEEECCccccCCCCCcEEE
Q 009523 301 LRCVD---VKLVSDLCHKKGAIVCIDGT--F--A----------TPLNQKAL----SLGADLVLHSATKFIGGHNDVLAG 359 (532)
Q Consensus 301 G~v~d---l~~I~~la~~~gi~lIvDet--~--a----------~~~~~~~l----~~gaDivv~S~sK~lgg~gd~~gG 359 (532)
|.+.+ ++++.++|++||++++.|.+ + + .......+ ...+|.+..|++|-++.+ +||
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vGg 274 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MGG 274 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---ccc
Confidence 66776 56888899999999999997 1 1 11111111 146899999999999877 588
Q ss_pred EEEeChH----HHHHHHHHh------hhcCCCccHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009523 360 SISGSGK----LVTQIRNLH------HVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 360 ~lv~~~~----li~~l~~~~------~~~G~~~~~~~a~l~l~~l~tl--~~r~~~~~~~a~~la~~L~~~ 418 (532)
+++++++ +.++++... ..+|+ ++.-+...+..||+.. ...+.......++|.+.|.+.
T Consensus 275 ~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGG-lagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 275 LLCFKDDSFFDVYTECRTLCVVQEGFPTYGG-LEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred eEEecchhHHHHHHHHHhhcccccCCcCcCc-hhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 9998764 334444322 12333 3333333333455431 223344456678888888775
No 368
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.20 E-value=1.4e-08 Score=104.90 Aligned_cols=158 Identities=24% Similarity=0.384 Sum_probs=121.5
Q ss_pred HHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHH
Q 009523 206 VEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 280 (532)
Q Consensus 206 Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al---l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le 280 (532)
+...+++|.|-+ .+=++-.|+++-++++++. -++..+++++...|+.+...++..++.+|+++..++.+|+++|+
T Consensus 125 fQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~ 204 (450)
T COG0403 125 FQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLE 204 (450)
T ss_pred HHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhh
Confidence 467889999864 4556666775555555544 22357999999999999999988899999999999999999999
Q ss_pred HhhcCCCeeEEEEeCCCCCCC-cccCHHHHHHHHHhCCCEEEEECC-CCCCCcccccccCCcEEEECCccc-----cCCC
Q 009523 281 AALNNNNVSLFFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF-----IGGH 353 (532)
Q Consensus 281 ~al~~~~tklV~lesP~NptG-~v~dl~~I~~la~~~gi~lIvDet-~a~~~~~~~l~~gaDivv~S~sK~-----lgg~ 353 (532)
+. .+.++..|+++.|+ -.| ...|+++|.+.+|++|+++++=.- .+-.+...|-++|+||++.+..-+ |||+
T Consensus 205 ~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGP 282 (450)
T COG0403 205 SA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGP 282 (450)
T ss_pred hc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCc
Confidence 98 54469999999998 567 667799999999999998876322 222344577889999999997763 4544
Q ss_pred CCcEEEEEEeChHHH
Q 009523 354 NDVLAGSISGSGKLV 368 (532)
Q Consensus 354 gd~~gG~lv~~~~li 368 (532)
. +|+...++++.
T Consensus 283 h---ag~fA~~~~~~ 294 (450)
T COG0403 283 H---AGYFAVKDEFK 294 (450)
T ss_pred c---eeeeeEhHhHh
Confidence 3 78887766553
No 369
>PLN02452 phosphoserine transaminase
Probab=99.20 E-value=2.8e-09 Score=111.86 Aligned_cols=244 Identities=11% Similarity=0.018 Sum_probs=154.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe---C-
Q 009523 201 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---D- 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~-sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v---d- 272 (532)
...++.++.|.++++.+ +++++ +||+.++.+++..++.+||++++....+.+.. +...++++|...+.. +
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r--~~~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK--AAKEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCCcEEEecCCC
Confidence 45667788999999863 35555 77789999999999999998877766555533 224556666544333 1
Q ss_pred ----CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECC
Q 009523 273 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 346 (532)
Q Consensus 273 ----~~dle~Le~al~~~~tklV~lesP~NptG~v-~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~ 346 (532)
..++++++ ..+ +.+.|++++-.-.||.. .|++++. ++++|+|.+...+ .+++..++|+|+ .|.
T Consensus 130 ~~~~~~~~~~~~--~~~-~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~sa 198 (365)
T PLN02452 130 KYTKIPSVSEWE--LTP-DAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGA 198 (365)
T ss_pred CCCCCCChHHcC--CCC-CCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--Eec
Confidence 12344432 122 47778775555568884 7777664 3899999996543 345555666644 699
Q ss_pred ccccCCCCCcEEEEEEeChHHHHHHHHH-------hh--hcC---CCccHHHHHHHHHhHHH------HHHHHHHHHHHH
Q 009523 347 TKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH--VLG---GALNPNAAYLIIRGMKT------LHLRVQQQNSTA 408 (532)
Q Consensus 347 sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~~--~~G---~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a 408 (532)
+|.+|++| .|+++.++++++++... .. ..+ .+++....+.+...++. +..+.+++.+.+
T Consensus 199 qK~lGP~G---l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 199 QKNVGPSG---VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccccCCCC---eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99999776 67888888887664321 00 001 23344444444444443 344556677888
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 474 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~v 474 (532)
+.+.++|++.+++ +.+.. .+.+ ....+++|.+++. +...+|++.++..|+..
T Consensus 276 ~~l~~~l~~~~G~---y~~~~--~~~~--------rs~~~vsF~~~~~-~~~~~f~~~~~~~g~~~ 327 (365)
T PLN02452 276 DLLYDAIDESNGF---YVCPV--EKSV--------RSLMNVPFTLGGS-ELEAEFVKEAAKAGMVQ 327 (365)
T ss_pred HHHHHHHHhCCCc---ccCCC--ChHH--------hCCeEEEEEcCCc-hhHHHHHHHHHHCCCcc
Confidence 8889999886654 11111 1111 1345889998764 46788999888766443
No 370
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=6.4e-09 Score=106.70 Aligned_cols=221 Identities=19% Similarity=0.196 Sum_probs=145.2
Q ss_pred CCCCCCCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHhccCC--C------EEEEcCCCCcc-hHHHHHH-
Q 009523 193 FEYGRYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVPAG--G------HIVTTTDCYRK-TRIFIET- 259 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~---ga~~~i~~sSG~~Ai~~al~all~~G--d------~VIv~~~~y~~-t~~~~~~- 259 (532)
|..+-+-.-....|++.|.+.. .++.+.+++||++|+..+|....+.. + .+|.-..+|++ +...+..
T Consensus 90 hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~ 169 (433)
T KOG1401|consen 90 HSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT 169 (433)
T ss_pred eccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh
Confidence 4444433333667788888887 45788999999999999997543321 2 38888888887 3333321
Q ss_pred hcccCCc-------EEEEeCCCCHHHHHHhhcCCC--eeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCC
Q 009523 260 VLPKMGI-------TATVIDPADMEGLEAALNNNN--VSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 260 ~l~~~Gv-------~v~~vd~~dle~Le~al~~~~--tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~ 326 (532)
.-..++. ++.....+|..++++.++.++ +.+|++|......|.+.. +..|.++|+++|+++|.||++
T Consensus 170 ~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~ 249 (433)
T KOG1401|consen 170 GNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQ 249 (433)
T ss_pred cccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhh
Confidence 1122222 344445668999999998754 799999999977776653 668999999999999999996
Q ss_pred CCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcCCC--ccHHHHHHHHHhHHHH
Q 009523 327 ATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTL 397 (532)
Q Consensus 327 a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~~--~~~~~a~l~l~~l~tl 397 (532)
.... .+..+..-.||.+ +.|.++|+ +..|+..+++++.+.+..-.. .+|++ -+|+++..+...++++
T Consensus 250 tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~gG--lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l 325 (433)
T KOG1401|consen 250 TGLGRLGYGWAQEYFGVTPDITT--VAKPLGGG--LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDEL 325 (433)
T ss_pred hCccccchHHHHHHhCcCCccee--ehhhccCC--ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHH
Confidence 5321 1233334567777 89999976 578888899988888764221 22333 3577777766666665
Q ss_pred H--HHHHHHHHHHHHHHHHHHh
Q 009523 398 H--LRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 398 ~--~r~~~~~~~a~~la~~L~~ 417 (532)
. ..+++..+..+.|.+.|.+
T Consensus 326 ~~~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 326 KDPETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 3 2333444444444444443
No 371
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.18 E-value=8e-09 Score=109.16 Aligned_cols=209 Identities=18% Similarity=0.217 Sum_probs=128.9
Q ss_pred HHHHHHHHHhhhCCCcE--EEeCCHH---HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHH
Q 009523 203 TVVVEEKMSALEGAEST--VIMASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 277 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~~--i~~sSG~---~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle 277 (532)
.-+++..|+++.|-+-+ =+...++ +|+.++.+.--+.+++|+++...|+.+...++..+...|++++.++.++..
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~ 191 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG 191 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC
Confidence 44568999999998642 3444444 444444443333456999999999999888887888899999988754211
Q ss_pred HHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC--CCCCCcccccccCCcEEEECCccccCCC--
Q 009523 278 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATKFIGGH-- 353 (532)
Q Consensus 278 ~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet--~a~~~~~~~l~~gaDivv~S~sK~lgg~-- 353 (532)
... .+ ++.+|++++|| -.|.+.|+++|.+++|++|+++++ .+ -+-.....|-++|+||++.+ +|.||-+
T Consensus 192 ~~d---~~-~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 192 TTD---DD-DTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp SB----ST-TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---C
T ss_pred Ccc---cc-CeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCC
Confidence 111 34 79999999998 589999999999999999999988 55 22234567889999999877 7776622
Q ss_pred -CCcEEEEEEeChHHHHHHHHH-------------------------hh---h--cCCCcc----HHHHHHHHHhHHHHH
Q 009523 354 -NDVLAGSISGSGKLVTQIRNL-------------------------HH---V--LGGALN----PNAAYLIIRGMKTLH 398 (532)
Q Consensus 354 -gd~~gG~lv~~~~li~~l~~~-------------------------~~---~--~G~~~~----~~~a~l~l~~l~tl~ 398 (532)
|+.-+|++..+++++.++-.. ++ . .++... ....|+...|-+.+.
T Consensus 265 ~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~ 344 (429)
T PF02347_consen 265 FGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLR 344 (429)
T ss_dssp CC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHH
Confidence 222368888777655443210 00 0 111111 113445555666666
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 009523 399 LRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~ 418 (532)
..-++...++.++++.|.+.
T Consensus 345 ~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 345 EIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 66677788999999999875
No 372
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.01 E-value=6.7e-08 Score=97.75 Aligned_cols=254 Identities=19% Similarity=0.178 Sum_probs=153.8
Q ss_pred CCCCCCCC--CchhHHHHH----HHHHhhhCCC---c--EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHH--HH
Q 009523 191 ASFEYGRY--GNPTTVVVE----EKMSALEGAE---S--TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI--FI 257 (532)
Q Consensus 191 ~~~~Y~R~--~~p~~~~Le----~~lA~l~ga~---~--~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~--~~ 257 (532)
.+|-=.|| ||...+++| ++--+.++.+ + .+-.-||+.|+..+..++++|+|+|.--+..+++... +.
T Consensus 70 EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~ 149 (477)
T KOG2467|consen 70 EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ 149 (477)
T ss_pred cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccc
Confidence 34554554 566666553 2222345542 2 3445699999999999999999999888777766321 11
Q ss_pred HHhcccCCcEEEEe-------CC----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC
Q 009523 258 ETVLPKMGITATVI-------DP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 258 ~~~l~~~Gv~v~~v-------d~----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~ 326 (532)
.. -++.-..-+++ ++ .|.|.||+.....++|+|+.- .+-.-+..|..++.++|.+.|++++.|-++
T Consensus 150 T~-~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG--~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAH 226 (477)
T KOG2467|consen 150 TP-TKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAG--TSAYSRLIDYARFRKIADKVGAYLMADMAH 226 (477)
T ss_pred cC-CceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEec--cccchhhccHHHHHHHHHhcCceeehhhhh
Confidence 01 11111111111 21 278899887766678888862 234567889999999999999999999995
Q ss_pred CC-----CCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh---------------HHHHHHHHH--hhhcCC-Ccc
Q 009523 327 AT-----PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNL--HHVLGG-ALN 383 (532)
Q Consensus 327 a~-----~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~---------------~li~~l~~~--~~~~G~-~~~ 383 (532)
.+ .+..+|+++ +|||..+.||.+-|+. ||++.-++ ++-+++... ....|+ .-.
T Consensus 227 ISgLVAA~vipsPFey-~DiVTTTTHKsLRGPR---g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNh 302 (477)
T KOG2467|consen 227 ISGLVAAGVIPSPFEY-CDIVTTTTHKSLRGPR---GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNH 302 (477)
T ss_pred HHHHHhcccCCCcccc-cceeeccccccccCCc---ceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcc
Confidence 43 344567777 8999999999999984 77776432 122333321 112222 111
Q ss_pred HHHH-HHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---CH
Q 009523 384 PNAA-YLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DL 457 (532)
Q Consensus 384 ~~~a-~l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---~~ 457 (532)
...+ +.++... ..+....++..+|++.+++.|.++.- ++..-|..+ .++-+.|.. +.
T Consensus 303 tIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy--~lvtgGTDn---------------HlvLvDLr~~G~dG 365 (477)
T KOG2467|consen 303 TIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGY--KLVTGGTDN---------------HLVLVDLRPKGVDG 365 (477)
T ss_pred hHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCc--eEecCCccc---------------eEEEEeccccCCch
Confidence 2211 1122222 23455667778999999999987532 122223222 266666653 23
Q ss_pred HHHHHHHHHcC
Q 009523 458 TATIKFIDALK 468 (532)
Q Consensus 458 ~~~~~~l~~L~ 468 (532)
..++++++.+.
T Consensus 366 arvE~vle~~~ 376 (477)
T KOG2467|consen 366 ARVEKVLELCH 376 (477)
T ss_pred HHHHHHHHHhh
Confidence 56778887764
No 373
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.98 E-value=2.4e-07 Score=96.85 Aligned_cols=242 Identities=12% Similarity=0.032 Sum_probs=143.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEE-EcCCCCcchHHHHHHhcccCCcEEEEeCC--
Q 009523 201 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVIDP-- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~-sSG~~Ai~~al~all~~Gd~VI-v~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-- 273 (532)
...++.++.|.++++.+ +++++ +||+.+..++...++.+||+++ +....+.+.. +. ..++++| ++..+..
T Consensus 49 ~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r-~~-~ea~~~g-~v~~~~~~~ 125 (364)
T PRK12462 49 SLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK-AI-GEASRVA-AMRVVWDGA 125 (364)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH-HH-HHHHhcC-CceEecCcC
Confidence 34566778888889863 35555 4567999999999999999654 3333343332 22 3455565 3443321
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEEC
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 345 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S 345 (532)
.+++++ .+.+ +.+.|++++-.-.+|...| ++.+.+++++|+|.+-... .+++..++ |+++.+
T Consensus 126 ~~~~~~~p~~~~~--~~~~-d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~ag 195 (364)
T PRK12462 126 ASGYRTLPSLAEL--DWDA-RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAH 195 (364)
T ss_pred CCCCCcCCCHHHh--ccCC-CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEee
Confidence 133443 1223 4677777554456788876 3333468999999984322 12333344 899999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHH----------hh--hcCCCccHHHHHHHHHhHHHH-------HHHHHHHHH
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNL----------HH--VLGGALNPNAAYLIIRGMKTL-------HLRVQQQNS 406 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~----------~~--~~G~~~~~~~a~l~l~~l~tl-------~~r~~~~~~ 406 (532)
..|.+|++| .++++.+++++++.... .. ..-.+++.+..|++...++.+ ..+.+++.+
T Consensus 196 sQKnlgP~G---ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ 272 (364)
T PRK12462 196 AQKNLGPAG---VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINAR 272 (364)
T ss_pred ccccCCCCc---eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999776 56778888777654321 00 111234445555544444433 345567778
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 472 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i 472 (532)
.++.+.+++++.++. |+... .+.+ +.--.+.|.+.+ .+...+|+...+..|+
T Consensus 273 ka~~ly~~id~~~~~----~~~~~-~~~~--------RS~mnv~f~~~~-~~l~~~f~~~a~~~gl 324 (364)
T PRK12462 273 KAAMLYATLDALNEV----IDCHA-HRAA--------RSTMNVAFRFRQ-PRLDTLFKEQSTEAGF 324 (364)
T ss_pred HHHHHHHHHHhCCCc----ccCCC-Chhh--------cCcceEEEEcCC-HHHHHHHHHHHHHCCC
Confidence 888888999887542 22211 1111 112256777764 4567788888776653
No 374
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.98 E-value=1.5e-06 Score=96.49 Aligned_cols=171 Identities=12% Similarity=0.023 Sum_probs=110.7
Q ss_pred EEEEcCCCCcchHHHHHHhcccCCc---EEEEeCC-----CCHHHHHHhhcC----C-CeeEEEEeCCCCCCCcccCHHH
Q 009523 242 HIVTTTDCYRKTRIFIETVLPKMGI---TATVIDP-----ADMEGLEAALNN----N-NVSLFFTESPTNPFLRCVDVKL 308 (532)
Q Consensus 242 ~VIv~~~~y~~t~~~~~~~l~~~Gv---~v~~vd~-----~dle~Le~al~~----~-~tklV~lesP~NptG~v~dl~~ 308 (532)
.++++...|.+... .+...|+ .++.++. .|+++|+++|++ . .+-+|+....+-.+|.+-|+++
T Consensus 224 ~vl~s~~aHyS~~K----Aa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~e 299 (608)
T TIGR03811 224 KWLVPQTKHYSWLK----AADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDK 299 (608)
T ss_pred EEEECCCccHHHHH----HHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHH
Confidence 57777777877543 3334454 2444443 288999888853 1 2455666677788999999999
Q ss_pred HHHHH---HhCCC--EEEEECCCCCCC---ccc------c----------------------------c--ccCCcEEEE
Q 009523 309 VSDLC---HKKGA--IVCIDGTFATPL---NQK------A----------------------------L--SLGADLVLH 344 (532)
Q Consensus 309 I~~la---~~~gi--~lIvDet~a~~~---~~~------~----------------------------l--~~gaDivv~ 344 (532)
|+++| +++|+ +++||++|+... ..+ | + -..+|-++.
T Consensus 300 I~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItv 379 (608)
T TIGR03811 300 IVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTI 379 (608)
T ss_pred HHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEe
Confidence 99998 66887 699999988642 111 0 0 026899999
Q ss_pred CCccccCCCCCcEEEEE-EeChHHHHHHHH---Hhh--------------hcCCCcc--HHHHHHHHHhH----HHHHHH
Q 009523 345 SATKFIGGHNDVLAGSI-SGSGKLVTQIRN---LHH--------------VLGGALN--PNAAYLIIRGM----KTLHLR 400 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~l-v~~~~li~~l~~---~~~--------------~~G~~~~--~~~a~l~l~~l----~tl~~r 400 (532)
.+||++.-+- .+|++ +.++++.+.+.. +.. ..|...+ ....|+.++.+ +.+...
T Consensus 380 DpHK~g~~Py--~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~ 457 (608)
T TIGR03811 380 DPHKMGYIPY--SAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKL 457 (608)
T ss_pred CcccccccCC--CeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999987664 35544 444544433321 000 1122222 45566666543 457778
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 009523 401 VQQQNSTALRMAKILEAH 418 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~ 418 (532)
+++..++++++.+.|+++
T Consensus 458 i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 458 IGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 888889999999999884
No 375
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=1.4e-06 Score=89.26 Aligned_cols=213 Identities=17% Similarity=0.144 Sum_probs=129.9
Q ss_pred hHHHHHHHHHhhh-CCC---------cEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEE
Q 009523 202 TTVVVEEKMSALE-GAE---------STVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 269 (532)
Q Consensus 202 ~~~~Le~~lA~l~-ga~---------~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~ 269 (532)
....+.+.++++. |.+ ..+-+.+|+.|+..+..-+ ..+...|.+++|+|+..... +...|.++.
T Consensus 70 G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~I----f~~aGl~v~ 145 (396)
T COG1448 70 GLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAI----FEAAGLEVE 145 (396)
T ss_pred CcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHH----HHhcCCcee
Confidence 3455666666654 532 2467789999988876654 44566799999999876644 445677776
Q ss_pred EeC---C----CCHHHHHHhhcCC-CeeEEEE-eCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCC---CCCcccc
Q 009523 270 VID---P----ADMEGLEAALNNN-NVSLFFT-ESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA---TPLNQKA 334 (532)
Q Consensus 270 ~vd---~----~dle~Le~al~~~-~tklV~l-esP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a---~~~~~~~ 334 (532)
.++ . .|.+.+.+.|+.- +-.+|++ ...+||||.-.. .++|.++.++.|.+-++|-+|- .++..+.
T Consensus 146 ~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa 225 (396)
T COG1448 146 TYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDA 225 (396)
T ss_pred eeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHH
Confidence 554 2 2666666655431 2334444 445799998876 5688899999999999999953 3333222
Q ss_pred c------ccCC-cEEEECCccccCCCCCcEEEEEEe--ChHHHHH----HHHHhhhcCCCccHHHHHHH----------H
Q 009523 335 L------SLGA-DLVLHSATKFIGGHNDVLAGSISG--SGKLVTQ----IRNLHHVLGGALNPNAAYLI----------I 391 (532)
Q Consensus 335 l------~~ga-Divv~S~sK~lgg~gd~~gG~lv~--~~~li~~----l~~~~~~~G~~~~~~~a~l~----------l 391 (532)
. ..+. -+|+.|+||.||--+.++|++.+. +.+..++ ++...+..-+.++...+.++ .
T Consensus 226 ~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra 305 (396)
T COG1448 226 YALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRA 305 (396)
T ss_pred HHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHH
Confidence 1 1122 478999999999888877775554 3344433 33322222222222222221 1
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 392 RGMKTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 392 ~~l~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.....+...+++..+.++.+.+.|+++
T Consensus 306 ~W~~El~~Mr~Ri~~mR~~lv~~L~~~ 332 (396)
T COG1448 306 EWEQELEEMRQRILEMRQALVDALKAL 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 122334444556667777788888763
No 376
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.87 E-value=6.3e-07 Score=102.48 Aligned_cols=155 Identities=18% Similarity=0.248 Sum_probs=111.0
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh--cc-CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 204 VVVEEKMSALEGAE--STVIMASGMSASTVMLLAL--VP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 204 ~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al--l~-~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
-+++..+++|.|-+ .+=++-.++++-++++++. .+ +..+|++++..|+.+...++..++..|++++. ++
T Consensus 127 ~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~ 200 (954)
T PRK12566 127 LNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DA 200 (954)
T ss_pred HHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cc
Confidence 34578999999976 4455555554333333332 11 24689999999999998888888899999875 34
Q ss_pred HHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC--CCCCCcccccccCCcEEEECCc-----cccC
Q 009523 279 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSAT-----KFIG 351 (532)
Q Consensus 279 Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet--~a~~~~~~~l~~gaDivv~S~s-----K~lg 351 (532)
+++.+.+ ++..|++.+|+ -.|.+.|+++|.+++|++|+++|+ .+ .+-.+...|-++|+||++.+.. =.||
T Consensus 201 ~~~~~~~-~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~G 277 (954)
T PRK12566 201 VDNLAAH-AVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYG 277 (954)
T ss_pred hhhcCCC-CEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCC
Confidence 4555655 69999999997 689999999999999999998664 33 2223445778899999998643 2445
Q ss_pred CCCCcEEEEEEeChHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQ 370 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~ 370 (532)
|+. +|++..++++..+
T Consensus 278 GP~---ag~~a~~~~~~R~ 293 (954)
T PRK12566 278 GPH---AAYFACRDDYKRA 293 (954)
T ss_pred CCC---eeeeeehHHHHhh
Confidence 553 7888887765544
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.81 E-value=3.1e-07 Score=95.16 Aligned_cols=144 Identities=16% Similarity=0.230 Sum_probs=108.2
Q ss_pred hHHHHHHHHHhhhCCCcE-EEeCCHHHHHHHHH---HHh-ccCC----CEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALEGAEST-VIMASGMSASTVML---LAL-VPAG----GHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga~~~-i~~sSG~~Ai~~al---~al-l~~G----d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
...+|++.|.++.|-+.+ +--++|+++=.+-+ ++. -..| +.+++++-.|+.+.. .+...|.+|+.|+
T Consensus 110 li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA----SAam~G~~VV~V~ 185 (496)
T COG1003 110 LIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA----SAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh----hHhhcCceEEEEe
Confidence 456788888988888765 44567775444333 333 2233 579999999987652 3455688888887
Q ss_pred CC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEECCCCCC--CcccccccCCcEEEE
Q 009523 273 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLH 344 (532)
Q Consensus 273 ~~-----dle~Le~al~~~~tklV~lesP~NptG~v-~dl~~I~~la~~~gi~lIvDet~a~~--~~~~~l~~gaDivv~ 344 (532)
.+ |+++|++.+.+ ++.++.+.+||. .|.. .++.+|+++.|++|..|..|.+-.-. -..+|-+.|.|++=.
T Consensus 186 ~~~~G~VDlddLk~k~~~-~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~Hl 263 (496)
T COG1003 186 CDENGNVDLDDLRAKAED-NLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHL 263 (496)
T ss_pred cCCCCCccHHHHHHHhcc-ceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEe
Confidence 54 89999999987 799999988883 3433 47999999999999999999983221 135788999999999
Q ss_pred CCccccC
Q 009523 345 SATKFIG 351 (532)
Q Consensus 345 S~sK~lg 351 (532)
-+||.|.
T Consensus 264 NLHKTF~ 270 (496)
T COG1003 264 NLHKTFC 270 (496)
T ss_pred ecccccc
Confidence 9999987
No 378
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=2.9e-06 Score=86.84 Aligned_cols=157 Identities=16% Similarity=0.225 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHhhhCC-------CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHHhcccCCc-EEEE
Q 009523 201 PTTVVVEEKMSALEGA-------ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATV 270 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga-------~~~i~~sSG~-~Ai~~al~all-~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv-~v~~ 270 (532)
..++.+|+.+|++... .+-|+.|+|. .|+..++..++ .+.+-|+++-|-|+=....+ ..+|. .|.+
T Consensus 113 qGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti----~l~~~~~v~Y 188 (475)
T KOG0258|consen 113 QGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATI----SLLGGTQVPY 188 (475)
T ss_pred cCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHH----HHhCCcccce
Confidence 4466677888877632 2345666665 88888887764 46788999998886433222 22222 2222
Q ss_pred -eC-----CCCHHHHHHhhcC----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCccc----
Q 009523 271 -ID-----PADMEGLEAALNN----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---- 333 (532)
Q Consensus 271 -vd-----~~dle~Le~al~~----~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~---- 333 (532)
.| ..|.++|++.+++ -+++++++-+|.||||.+.. +++|.++|+++|+.++.||+|-..+...
T Consensus 189 yLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skF 268 (475)
T KOG0258|consen 189 YLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKF 268 (475)
T ss_pred eeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcch
Confidence 23 2377888776643 25788888899999999985 7899999999999999999954322111
Q ss_pred -----cc-ccC---C----cEEEECCccccCCCCCcEEEEE
Q 009523 334 -----AL-SLG---A----DLVLHSATKFIGGHNDVLAGSI 361 (532)
Q Consensus 334 -----~l-~~g---a----Divv~S~sK~lgg~gd~~gG~l 361 (532)
.+ ++| . -+.++|.||.+.|--+-+||++
T Consensus 269 hSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 269 HSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred HhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 00 111 2 1567899998876644567876
No 379
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.66 E-value=3.4e-06 Score=88.08 Aligned_cols=267 Identities=16% Similarity=0.245 Sum_probs=161.6
Q ss_pred HHHHhhcccCCCCCCCCCchhHHHHHHHHH----hhhCC-----------CcEEEeCCHHHHHHHHHHHh-------ccC
Q 009523 182 LIDFKEKRRASFEYGRYGNPTTVVVEEKMS----ALEGA-----------ESTVIMASGMSASTVMLLAL-------VPA 239 (532)
Q Consensus 182 ~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA----~l~ga-----------~~~i~~sSG~~Ai~~al~al-------l~~ 239 (532)
+.+...+.-+...++...+|...+||..+. ++++- ...++.+|.+++...++.+. .+.
T Consensus 90 ladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~ 169 (511)
T KOG0628|consen 90 LADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKS 169 (511)
T ss_pred HHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhc
Confidence 334444445566778889999999985444 44431 24688888888877776543 122
Q ss_pred C-----------C-EEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-----CHHHHHHhhcCC----CeeEEEEeCCCC
Q 009523 240 G-----------G-HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN----NVSLFFTESPTN 298 (532)
Q Consensus 240 G-----------d-~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-----dle~Le~al~~~----~tklV~lesP~N 298 (532)
+ + .+.+++..|.+.. ..+-..|++.+.++.+ +.+.|+++|++. -+-.+++-+..
T Consensus 170 ~~p~~~e~~~~~~lV~Y~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G- 244 (511)
T KOG0628|consen 170 RPPELHESSVLARLVAYCSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG- 244 (511)
T ss_pred CCCcccchhhhhhheEEecCcccchHH----HhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-
Confidence 2 1 2344555665533 3334446777766543 577888888652 13334443332
Q ss_pred CCCcc--cCHHHHHHHHHhCCCEEEEECCCCCCCcc----cccccC---CcEEEECCccccCCCCCcEEEEEEe------
Q 009523 299 PFLRC--VDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG---ADLVLHSATKFIGGHNDVLAGSISG------ 363 (532)
Q Consensus 299 ptG~v--~dl~~I~~la~~~gi~lIvDet~a~~~~~----~~l~~g---aDivv~S~sK~lgg~gd~~gG~lv~------ 363 (532)
-|+.+ -++.+|..+|+++|++++||++|++.... +.+-.| +|-+-.-.||++--+-|.-.=|+-.
T Consensus 245 TT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~ 324 (511)
T KOG0628|consen 245 TTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSR 324 (511)
T ss_pred CccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeee
Confidence 34444 46999999999999999999999864332 222223 4667777888887655443222221
Q ss_pred ----ChHHHH--------HHHHHhhhcCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009523 364 ----SGKLVT--------QIRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 429 (532)
Q Consensus 364 ----~~~li~--------~l~~~~~~~G~~~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl 429 (532)
++...+ .++.++-.+|-..-.+-.|..+| |.+.+..+++++.+.++.+-+.+.+-+..+-+.-.
T Consensus 325 ~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~-- 402 (511)
T KOG0628|consen 325 AFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR-- 402 (511)
T ss_pred eeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc--
Confidence 111111 01222223344444556676665 66788888888888888777777665554322211
Q ss_pred CCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC
Q 009523 430 KSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 470 (532)
Q Consensus 430 ~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~ 470 (532)
.=|++.|.+++..+..+.|++++...
T Consensus 403 ---------------~lgLvcFRlk~~N~~ne~Ll~~in~~ 428 (511)
T KOG0628|consen 403 ---------------ILGLVCFRLKGDNEINEALLNRLNSS 428 (511)
T ss_pred ---------------ccceeEEeecCCcHHHHHHHHHHHhc
Confidence 22589999998767788899888653
No 380
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.55 E-value=1.2e-06 Score=91.45 Aligned_cols=216 Identities=16% Similarity=0.143 Sum_probs=134.7
Q ss_pred hhHHHHH----HHHHhhhCCCc---EEEeCCHHHHHHHHHHHh---ccC--C---CEEEEcCCCCcchHHHHHHhcccCC
Q 009523 201 PTTVVVE----EKMSALEGAES---TVIMASGMSASTVMLLAL---VPA--G---GHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 201 p~~~~Le----~~lA~l~ga~~---~i~~sSG~~Ai~~al~al---l~~--G---d~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
|....++ ..++.+++++. ...+++|++++.++.+.. .+. | -.++++...|. .++.+...++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~----a~eK~a~yf~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHA----AFEKAARYFE 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHH----HHHHHHhhEE
Confidence 4444444 56677787743 244566778855554422 111 2 13555444443 3455666677
Q ss_pred cEEEEeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh-CCCEEEEECCCCCCCcc----c-
Q 009523 266 ITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQ----K- 333 (532)
Q Consensus 266 v~v~~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~-~gi~lIvDet~a~~~~~----~- 333 (532)
++++.++.+ |+..+.+.+++ +|.+|+.+.|+-|+|.+-|+++|.++.-+ +++++++|.+-+.++.. .
T Consensus 192 v~l~~V~~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 192 VELREVPLDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred EEEEeeeccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 877777644 89999999998 69999999999999999999999999988 99999999996554331 1
Q ss_pred -cccc---CCcEEEECCccccC-CCCCcEEEEEE-eChHHH-HHHHHHhhh----------cCCCcc--HHHHHHHHH--
Q 009523 334 -ALSL---GADLVLHSATKFIG-GHNDVLAGSIS-GSGKLV-TQIRNLHHV----------LGGALN--PNAAYLIIR-- 392 (532)
Q Consensus 334 -~l~~---gaDivv~S~sK~lg-g~gd~~gG~lv-~~~~li-~~l~~~~~~----------~G~~~~--~~~a~l~l~-- 392 (532)
+.++ |..-+..+.|||-- +.| .|+++ .++++. .++.-.... .|+..+ ...+|..+-
T Consensus 271 ~~fdFr~p~V~Sisa~~HKYGl~~~G---~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l 347 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKYGLAPAG---SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSL 347 (491)
T ss_pred cccccCCCCceeEeeccceeeeeecC---cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHh
Confidence 2222 33345567899743 333 34444 343332 222111111 122222 234554432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009523 393 GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 424 (532)
Q Consensus 393 ~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V 424 (532)
|-+.....+++..+++..|.+.+++.+++.-+
T Consensus 348 G~eGY~~~~~~ive~~~~l~egie~i~~i~i~ 379 (491)
T KOG1383|consen 348 GEEGYRENTQNIVETARKLREGIENIKGIKIV 379 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhccccceec
Confidence 44556778888899999999999987665433
No 381
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.55 E-value=4.1e-06 Score=85.12 Aligned_cols=271 Identities=14% Similarity=0.143 Sum_probs=129.9
Q ss_pred HHHHHHHHHhhh---C-C---CcEEEeCCHH-HHHHHHHHHhccC---C---CEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 203 TVVVEEKMSALE---G-A---ESTVIMASGM-SASTVMLLALVPA---G---GHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 203 ~~~Le~~lA~l~---g-a---~~~i~~sSG~-~Ai~~al~all~~---G---d~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
..+|++.|-+|. | + +.-|++++|+ +.+++++.+|... . -+|+...|-|..... ...+++....+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~-qt~~f~s~~y~w 123 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPE-QTDFFDSRLYKW 123 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHH-HCCCT-BTTEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHH-HHHhccccCccc
Confidence 455666666654 4 2 4578888887 8888888887543 1 278888887765432 223343322222
Q ss_pred EEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCc
Q 009523 269 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 347 (532)
Q Consensus 269 ~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~s 347 (532)
. -|... ....-.. .+-+=++++||||.|.+-. .+++.-+..+|.|=+|.-|.. .-+....-||.++|+|
T Consensus 124 ~-Gda~~---~~~~~~~-~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~S 193 (363)
T PF04864_consen 124 A-GDASN---FKNSDNP-SPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTLS 193 (363)
T ss_dssp E-EECCC---GTT-S-C-CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEEHH
T ss_pred c-ccHHh---hccCCCC-CCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceEEEEEe
Confidence 1 11111 1111111 3456677899999998731 123555677899999765432 1112334589999999
Q ss_pred cccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--------------HHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--------------RVQQQNSTALRMA 412 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--------------r~~~~~~~a~~la 412 (532)
|.-| |.+.+.||.+. ++++.+++...........+-..+.-++.-|+.+-. -.+...+.-++|.
T Consensus 194 K~TG-HAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~ 272 (363)
T PF04864_consen 194 KLTG-HAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLR 272 (363)
T ss_dssp HHCS--GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHH
T ss_pred cccC-ccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHH
Confidence 9875 54456666655 456777777655433333343333222222222111 1112223344555
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhc-CCcccEEEEEEcC-CHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~-~g~G~~vsf~l~g-~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.... +..+|.++ |+|.-+-++. ...+..-|+.-.. +.+++..++.+.++.+ .-|
T Consensus 273 ~~~~~S~---rFSLq~~~--~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~t---r~G------------- 331 (363)
T PF04864_consen 273 AAVSASK---RFSLQKFS--PQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIIT---RSG------------- 331 (363)
T ss_dssp HHHCCSS---SEEE---S--CEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEE---EEG-------------
T ss_pred HHHHhcC---ceecCcCC--chhccccccccCCCCCeEEEecCCcccccHHHHHHhCCccc---CCC-------------
Confidence 5554432 23444442 3443222222 3457788888763 2357888887665433 222
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
..+|.+..++|||+--
T Consensus 332 ---------~~fga~~ryVRlSml~ 347 (363)
T PF04864_consen 332 ---------VLFGADSRYVRLSMLK 347 (363)
T ss_dssp ---------GGGTS-TTEEEEESSS
T ss_pred ---------CccCCCCCeEEEeccC
Confidence 1245667899999864
No 382
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.51 E-value=2e-06 Score=85.11 Aligned_cols=284 Identities=15% Similarity=0.198 Sum_probs=165.5
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHHh----c-ccCCc---EEEEe
Q 009523 203 TVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETV----L-PKMGI---TATVI 271 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al---l~~Gd~VIv~~~~y~~t~~~~~~~----l-~~~Gv---~v~~v 271 (532)
++..++..+.+-+-+-+++++||++|+.++++-. .+..| +|+-+..|++.....-++ + +.-++ +.+.+
T Consensus 89 v~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHV 167 (452)
T KOG1403|consen 89 VQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHV 167 (452)
T ss_pred HHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEe
Confidence 3444444455555567899999999999998743 34445 555667777743221111 0 00111 11111
Q ss_pred -CC---------------CC-----HHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEE
Q 009523 272 -DP---------------AD-----MEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVC 321 (532)
Q Consensus 272 -d~---------------~d-----le~Le~al~~-----~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lI 321 (532)
+. .| .+.+++.+++ ..+.+.+.|+-.+-.|.+.| .+++++..+.+|-+.|
T Consensus 168 APcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~I 247 (452)
T KOG1403|consen 168 APCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCI 247 (452)
T ss_pred cCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEE
Confidence 10 01 2334444421 24667778888888898887 5688888899999999
Q ss_pred EECCCCCC-------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH----HhhhcCCCccHHHHHHH
Q 009523 322 IDGTFATP-------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LHHVLGGALNPNAAYLI 390 (532)
Q Consensus 322 vDet~a~~-------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~----~~~~~G~~~~~~~a~l~ 390 (532)
.||++..+ +.+.....-.|||+ +.|-+|-+. ..+.++..+++.+.+.. +.+.+|+ +|..++..
T Consensus 248 aDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNGh--PVa~VattkeIA~Af~atgv~YFNTyGG--nPVsCAv~ 321 (452)
T KOG1403|consen 248 ADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNGH--PVAAVATTKEIAQAFHATGVEYFNTYGG--NPVSCAVG 321 (452)
T ss_pred eehhhhcccccchhhhhhhhhccccchhe--ecccCCCCC--eeeEEeccHHHHHHhccccceehhccCC--CchhHHHH
Confidence 99995432 12233344568887 889887433 46788888888887754 3345555 67777776
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHH
Q 009523 391 IRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKF 463 (532)
Q Consensus 391 l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------~~~~~~~ 463 (532)
+.-++... -+..+++++++.++|+..-+-.+..++.+ ...+|.|.++.++|-.+ ...+..+
T Consensus 322 laVm~v~e--~E~Lq~ha~~vG~~L~~lL~~~k~kh~~I----------GDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~ 389 (452)
T KOG1403|consen 322 LAVMRVCE--DENLQEHAQQVGEKLEVLLRRLKQKHECI----------GDVRGVGLFIGIDLVKDRKTRTPDTKEAHWV 389 (452)
T ss_pred HHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHhhhccce----------eccccceEEEeeeeecccccCCCcHHHHHHH
Confidence 66665443 23455666666665543211001122211 12367788888987532 3455667
Q ss_pred HHHcCCCc-eeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEE----EEecCCCHHHHHHHHHHHHh
Q 009523 464 IDALKIPY-IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR----FSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 464 l~~L~~~~-i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IR----lSvG~ed~~dli~dL~~AL~ 530 (532)
+.+|+... +-.|.-|. .++.+. ++|..|+.++.+..|++.|.
T Consensus 390 v~rlke~y~VLlsaDGP-------------------------h~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 390 VNRLKELYRVLLSADGP-------------------------HRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHHHhhhEEEecCCC-------------------------CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 77776432 44443222 122222 57788898888888888774
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.12 E-value=4e-05 Score=79.81 Aligned_cols=152 Identities=15% Similarity=0.200 Sum_probs=94.1
Q ss_pred CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC--------CCHHHHHHhhcC
Q 009523 217 ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNN 285 (532)
Q Consensus 217 ~~~i~~sSG~-~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--------~dle~Le~al~~ 285 (532)
..+++++-.+ .++.+.+.++- ..++.||.+...+.+.+.. ....|.++..++. .|.+.+++.+++
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~ka----i~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~ 150 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKA----IERAGLEPVVVENVLEGDELITDLEAIEAKIEE 150 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHH----HHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHH
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHH----HHhcCCeEEEeeccCCCCeeeccHHHHHHHHHH
Confidence 4567774443 34566666663 4578999998888765533 3445777776662 257777777753
Q ss_pred --CCeeEEEEeCCCCCCCcccC-HHHHHHHHHhCCCEEEEECCCCCCCc------ccccccC-CcEEEECCccccCCCCC
Q 009523 286 --NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLHSATKFIGGHND 355 (532)
Q Consensus 286 --~~tklV~lesP~NptG~v~d-l~~I~~la~~~gi~lIvDet~a~~~~------~~~l~~g-aDivv~S~sK~lgg~gd 355 (532)
.+..+.++.+++--.++..| +++|+++|++||++.++-++|+.... .+....| .|+++.|+-|-|--+.
T Consensus 151 ~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPv- 229 (389)
T PF05889_consen 151 LGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPV- 229 (389)
T ss_dssp HCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEES-
T ss_pred hCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecC-
Confidence 13578888888888899998 99999999999999999999875211 1223343 5899999999665332
Q ss_pred cEEEEEEeC-hHHHHHHHHH
Q 009523 356 VLAGSISGS-GKLVTQIRNL 374 (532)
Q Consensus 356 ~~gG~lv~~-~~li~~l~~~ 374 (532)
.++.+.+. +..+..+...
T Consensus 230 -Ggai~As~~~~~i~~vs~~ 248 (389)
T PF05889_consen 230 -GGAIMASFDPSGILAVSKE 248 (389)
T ss_dssp -SHEEEEESSHHHHHHHHHT
T ss_pred -CCcEEEecCHHHHHHHHHH
Confidence 13444443 4566666543
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.00 E-value=9.8e-05 Score=76.63 Aligned_cols=203 Identities=12% Similarity=0.120 Sum_probs=124.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhc---cC-----C-----C-EEEEcCCCCcchHHHHHHhcccCC---cEEEEeCCC-----
Q 009523 217 ESTVIMASGMSASTVMLLALV---PA-----G-----G-HIVTTTDCYRKTRIFIETVLPKMG---ITATVIDPA----- 274 (532)
Q Consensus 217 ~~~i~~sSG~~Ai~~al~all---~~-----G-----d-~VIv~~~~y~~t~~~~~~~l~~~G---v~v~~vd~~----- 274 (532)
.+.|+.++|+-++..++.... -| | + .+.+++.+|.+... ....+| -.+..|+.+
T Consensus 160 ~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k----aAa~lg~gtd~c~~v~t~e~Gkm 235 (510)
T KOG0629|consen 160 GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK----AAAFLGLGTDHCIKVKTDERGKM 235 (510)
T ss_pred CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH----HHHHhccCCceeEEecccccCcc
Confidence 468999999855554443221 11 1 2 34455666766443 233333 234445433
Q ss_pred CHHHHHHhhcCCC-----eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccccc----c---cCCcEE
Q 009523 275 DMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL----S---LGADLV 342 (532)
Q Consensus 275 dle~Le~al~~~~-----tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l----~---~gaDiv 342 (532)
++++||+.|...+ +-+|-...-+...|..-|++.|+++|++|+.+++||++++.++..... - .-+|-|
T Consensus 236 ~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~Sv 315 (510)
T KOG0629|consen 236 IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSV 315 (510)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCce
Confidence 6888988774322 334444444567788999999999999999999999999886543221 1 136789
Q ss_pred EECCccccCCCCCcEEEEEEeCh-HHHHHHHHHh---------------------hhcCCCccHHHHHHHHH--hHHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLH---------------------HVLGGALNPNAAYLIIR--GMKTLH 398 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~---------------------~~~G~~~~~~~a~l~l~--~l~tl~ 398 (532)
..+.||++|.+- -.++...+. .+.++..+.. ...|-....+-.|+..+ |.+.+.
T Consensus 316 twnpHK~~gapl--qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe 393 (510)
T KOG0629|consen 316 TWNPHKLMGAPL--QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFE 393 (510)
T ss_pred eecHHHhhcCcc--hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHH
Confidence 999999998653 223333222 2333222111 01233455666777654 455577
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEe
Q 009523 399 LRVQQQNSTALRMAKILEAHPKVKRVH 425 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~p~v~~V~ 425 (532)
..+++..++++++.+.|++.+....+.
T Consensus 394 ~~v~k~~~lA~yl~~~lrer~~~~~l~ 420 (510)
T KOG0629|consen 394 AQVDKCLRLAEYLYDRLREREGFEMLF 420 (510)
T ss_pred HHHHHHHHHHHHHHHHHHhcccceehh
Confidence 788888899999999998876654443
No 385
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.74 E-value=0.00059 Score=69.46 Aligned_cols=178 Identities=16% Similarity=0.251 Sum_probs=101.3
Q ss_pred HHHHHHhhcCC-----CeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC------Ccc--cccccC
Q 009523 276 MEGLEAALNNN-----NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQ--KALSLG 338 (532)
Q Consensus 276 le~Le~al~~~-----~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~------~~~--~~l~~g 338 (532)
++++|+.|.++ .+.+|++|......|.-.- +..|.+++++||+.+||||++..+ +.. -.+..-
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 56677776432 4789999999988886642 789999999999999999995321 111 123345
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHH--HHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVT--QIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 416 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~--~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~ 416 (532)
+|+|. |||-|- .||+.. +++++. ..+.....+| .|.-..++...++.+. .+...+|...+.+.|.
T Consensus 335 pD~vT--FSKK~q-----~gGffh-~~~frpn~pYrifNTWmG---dP~k~lll~~vv~~I~--~~~Ll~n~~~vG~~l~ 401 (484)
T KOG1405|consen 335 PDVVT--FSKKFQ-----TGGFFH-DEEFRPNEPYRIFNTWMG---DPSKNLLLEEVVQEIK--REDLLNNVAHVGKALL 401 (484)
T ss_pred cccee--hhhhhh-----cCcccc-CcccCCCchHHHhhhhcC---ChHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHH
Confidence 78887 677665 356544 333331 1121111122 3443333333333222 2334455554444433
Q ss_pred hC-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009523 417 AH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 417 ~~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
+- ..+ .-.||+.- ...+|.|-++++..+.+ ..-.+|+..+++. |+..||+
T Consensus 402 ~gL~~L-q~~~p~~~---------~~~RGrGTF~a~d~ps~-~~Rdk~i~~~~~n--Gv~~GGC 452 (484)
T KOG1405|consen 402 KGLLEL-QAKYPGKI---------NNLRGRGTFIAWDCPSG-SIRDKLILIARLN--GVNLGGC 452 (484)
T ss_pred HHHHHH-HHhCchhh---------hcccccceEEEEeCCCh-HHHHHHHHHHHHc--Cceeccc
Confidence 21 011 12344421 23467899999999864 4556788777754 5677776
No 386
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00041 Score=75.23 Aligned_cols=214 Identities=20% Similarity=0.215 Sum_probs=129.5
Q ss_pred HHHHHHHHHhhhCCCc-EEEeCCHHHHHH---HHHHHhc-cCCC----EEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALEGAES-TVIMASGMSAST---VMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~~-~i~~sSG~~Ai~---~al~all-~~Gd----~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...|++.|+++.|-+. ++--+||.++-. .++++.+ ..|+ .-+++-..|+.+. ..+...|.+|+.|+.
T Consensus 584 f~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNP----ASA~MagmkvvpV~~ 659 (1001)
T KOG2040|consen 584 FTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNP----ASAAMAGMKVVPVGC 659 (1001)
T ss_pred HHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCCh----hhHHhcCCEEEEeec
Confidence 4567888888888765 455577774433 3344443 3443 3566666777654 234556888887764
Q ss_pred C-----CHHHHHHhhcCC--CeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEECCCCC-C-CcccccccCCcEEE
Q 009523 274 A-----DMEGLEAALNNN--NVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFAT-P-LNQKALSLGADLVL 343 (532)
Q Consensus 274 ~-----dle~Le~al~~~--~tklV~lesP~NptG~v-~dl~~I~~la~~~gi~lIvDet~a~-~-~~~~~l~~gaDivv 343 (532)
+ |..+|++..+++ +..++.+..|+. .|.. ..+++++++.|+||--+..|.+-.. . -..+|-+.|+|+.-
T Consensus 660 ~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~H 738 (1001)
T KOG2040|consen 660 DANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCH 738 (1001)
T ss_pred cCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcccccccee
Confidence 3 778887776543 578899989984 3444 4699999999999999999998322 1 13578889999998
Q ss_pred ECCccccCC-CC--CcEEEEEEeChHHHHHHHHHh----------h--------hcCCC--ccHHHHHHHHHhHHHHHHH
Q 009523 344 HSATKFIGG-HN--DVLAGSISGSGKLVTQIRNLH----------H--------VLGGA--LNPNAAYLIIRGMKTLHLR 400 (532)
Q Consensus 344 ~S~sK~lgg-~g--d~~gG~lv~~~~li~~l~~~~----------~--------~~G~~--~~~~~a~l~l~~l~tl~~r 400 (532)
--+||.|.- || +..+|=+..++.+...+.... . .+|+. +...-+|.-+-|.+.+...
T Consensus 739 LNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~a 818 (1001)
T KOG2040|consen 739 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDA 818 (1001)
T ss_pred ecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchh
Confidence 899998862 22 111233333333322221100 0 11111 1111233333333334433
Q ss_pred HHHHHHHHHHHHHHHHhCCCc
Q 009523 401 VQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v 421 (532)
-+...-|+.+++++|+.|-++
T Consensus 819 s~~AiLNaNYMakRLe~hYki 839 (1001)
T KOG2040|consen 819 SKIAILNANYMAKRLESHYKI 839 (1001)
T ss_pred hHHHhhhhHHHHHHHhhccce
Confidence 344557889999999998554
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.60 E-value=0.0086 Score=61.69 Aligned_cols=272 Identities=14% Similarity=0.070 Sum_probs=144.3
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCH-HHHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHHhcccCCcEEEEeC--
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMASG-MSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVID-- 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~sSG-~~Ai~~al~all~~Gd~--VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd-- 272 (532)
....+.++.+.++++.+ +++++.+| +....++...|+..+.. |.. ..|...- + ...+.++......+
T Consensus 50 ~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a--~-~eA~~~~~~~~~~~~~ 124 (365)
T COG1932 50 NVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFA--I-KEAKKVGKQPKLIDAR 124 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhH--H-HHHHHhcccccccccc
Confidence 34566788899999874 35666555 47888888888865542 333 2332211 1 11222222111111
Q ss_pred -----C---CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC-HHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEE
Q 009523 273 -----P---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLV 342 (532)
Q Consensus 273 -----~---~dle~Le~al~~~~tklV~lesP~NptG~v~d-l~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDiv 342 (532)
. .+++.+. +.+ +...|+.++=..-+|.-.+ ...+ .. +.++|+|.+-... ..++.. .-|++
T Consensus 125 ~~~~~~~~iP~~~~~~--~~~-~~ayv~~~~NeTi~Gv~v~~~p~~---~~--~~~~v~D~SS~ilsr~iDvs--k~dvi 194 (365)
T COG1932 125 IEEAGYGSIPDLSKWD--FSD-NDAYVHFCWNETISGVEVPELPDI---GS--DGLLVADASSAILSRPIDVS--KYDVI 194 (365)
T ss_pred eeccCccCCCChhhcc--cCC-CccEEEEecCCcccceEccCCCCC---CC--CceEEEecccHHhcCCCChh--HcceE
Confidence 1 1233222 222 2333544222223455444 1111 11 2789999883321 112222 34799
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHH--h--------hhcC---CCccHHHHHHHHHhHHHH------HHHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--H--------HVLG---GALNPNAAYLIIRGMKTL------HLRVQQ 403 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~--------~~~G---~~~~~~~a~l~l~~l~tl------~~r~~~ 403 (532)
..+..|.+||-| .++++.++++++++... . ...+ .+++.+.-++..-.++++ ....++
T Consensus 195 yagaQKnlGpaG---ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~r 271 (365)
T COG1932 195 YAGAQKNLGPAG---LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEAR 271 (365)
T ss_pred EEehhhccCccc---eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999887 67888899888776542 0 1112 234444444443344432 344456
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~ 483 (532)
..++++.|.+++++.+.......|... .--.+.|.+. +.+..+.|+..+...+...--|
T Consensus 272 n~~ka~~LY~~id~s~fy~~~v~~~~R--------------S~mnV~f~~~-~~~ld~~fv~eae~~gl~~lkG------ 330 (365)
T COG1932 272 NQAKAQLLYDWIDKSDFYRNLVAKANR--------------SRMNVTFTLV-DAELDKGFVAEAEAAGLIYLKG------ 330 (365)
T ss_pred HHHHHHHHHHHHHhCCccccccchhhc--------------cceeEEEEcC-cHHHHHHHHHHHHHcCCceecc------
Confidence 668899999999987543322222211 1124677776 3355577777776555322222
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALH 530 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG----~ed~~dli~dL~~AL~ 530 (532)
|. . .+-+|+|++ +|+.+.|++-++...+
T Consensus 331 -------hr-----------~-vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 331 -------HR-----------S-VGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred -------cc-----------C-CCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 11 1 233999987 3566666666555443
No 388
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.42 E-value=0.047 Score=55.16 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=92.4
Q ss_pred EEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhcccCCc----EEEEeCC----CCHHHHHHhhcCCC-
Q 009523 219 TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGI----TATVIDP----ADMEGLEAALNNNN- 287 (532)
Q Consensus 219 ~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv----~v~~vd~----~dle~Le~al~~~~- 287 (532)
.+-.-||+.|+..+..-+ .-+...|.+++|++......+ +..|. +..+.+. .|++.+...|+...
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if----~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe 177 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF----EKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPE 177 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH----HHcCCceeeeeeeecCCCceecHHHHHHHHhhCCC
Confidence 455678888877665433 223567999999998765443 44552 2334443 26777766665322
Q ss_pred eeEEEEeCC-CCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcccc----------cccCC-cEEEECCccccCC
Q 009523 288 VSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGA-DLVLHSATKFIGG 352 (532)
Q Consensus 288 tklV~lesP-~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~~----------l~~ga-Divv~S~sK~lgg 352 (532)
-..+++... +||||.=.. ..+|++..++.+...+.|-+|.+...-++ .+.|. -+|+.||+|-+|-
T Consensus 178 ~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGl 257 (410)
T KOG1412|consen 178 GSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGL 257 (410)
T ss_pred CcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccc
Confidence 234444444 799997654 45777878888999999999544322221 12233 3788999999997
Q ss_pred CCCcEEE--EEEeChHHHHHHH
Q 009523 353 HNDVLAG--SISGSGKLVTQIR 372 (532)
Q Consensus 353 ~gd~~gG--~lv~~~~li~~l~ 372 (532)
-+...|- +++-++..+..+.
T Consensus 258 YneRvGnltvv~~n~a~i~~v~ 279 (410)
T KOG1412|consen 258 YNERVGNLTVVVNNPAVIAGVK 279 (410)
T ss_pred ccccccceEEEecChhHHHHHH
Confidence 7766544 3334555555443
No 389
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.33 E-value=0.0098 Score=60.99 Aligned_cols=213 Identities=20% Similarity=0.190 Sum_probs=123.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccC-----CCEEEEcCCCCcchHHHHHHhcccCCcEEEEe--
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRKTRIFIETVLPKMGITATVI-- 271 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~-----Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v-- 271 (532)
++.....|++.+.+.+|-+..+-+.-|-.|=+..+..++++ |.+.++..+.|..|.+.- .+..|..+.-+
T Consensus 77 gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h---~~~ng~~~~n~~~ 153 (471)
T COG3033 77 GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGH---IQINGATPRNVYV 153 (471)
T ss_pred ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHH---HHhcCCccccccc
Confidence 34457789999999999888888877776666666666554 555666666666654321 12223222111
Q ss_pred C-------------CCCHHHHHHhhcC---CCeeEEEEeCCCCC-CCccc---CHHHHHHHHHhCCCEEEEECC-CCCC-
Q 009523 272 D-------------PADMEGLEAALNN---NNVSLFFTESPTNP-FLRCV---DVKLVSDLCHKKGAIVCIDGT-FATP- 329 (532)
Q Consensus 272 d-------------~~dle~Le~al~~---~~tklV~lesP~Np-tG~v~---dl~~I~~la~~~gi~lIvDet-~a~~- 329 (532)
+ ..|++.|+++|++ .++..|++.--+|- .|... .++++.++|++|+++++.|.+ |+..
T Consensus 154 ~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENa 233 (471)
T COG3033 154 DEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENA 233 (471)
T ss_pred cccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhh
Confidence 1 1278999998864 24666666433443 34443 477999999999999999999 4432
Q ss_pred Ccccccc----------------cCCcEEEECCccccCCCCCcEEEEEEeChH----HHHHHHHHh------hhcCCCcc
Q 009523 330 LNQKALS----------------LGADLVLHSATKFIGGHNDVLAGSISGSGK----LVTQIRNLH------HVLGGALN 383 (532)
Q Consensus 330 ~~~~~l~----------------~gaDivv~S~sK~lgg~gd~~gG~lv~~~~----li~~l~~~~------~~~G~~~~ 383 (532)
+.++.-+ .-+|-.+.|+-|----. +||+++.+++ +...++... ..+|+..+
T Consensus 234 YFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~G 310 (471)
T COG3033 234 YFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAG 310 (471)
T ss_pred hhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceec---cccEEEecCccHHHHHHHHHhheEeeccccccCcccc
Confidence 1111000 12577777887742211 6899888764 555555322 23344333
Q ss_pred HHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009523 384 PNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 384 ~~~a~l~l~~l~tl--~~r~~~~~~~a~~la~~L~~~ 418 (532)
-.... +..||+.- ...++...+..++|++.|++.
T Consensus 311 rdmea-lAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 311 RDMEA-LAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred hhHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 22222 22344321 122333345568889988875
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.28 E-value=0.0014 Score=71.18 Aligned_cols=137 Identities=20% Similarity=0.351 Sum_probs=96.5
Q ss_pred HHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhh
Q 009523 207 EEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAAL 283 (532)
Q Consensus 207 e~~lA~l~ga~--~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al 283 (532)
...++++.|-+ .+-+.--|++|-++..++. ..++.++++...+|+.+...++...+.+|++++..+ +++.....
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---~~~~~~s~ 245 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---IKEADYSS 245 (1001)
T ss_pred HHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---HHHhhccc
Confidence 45677777753 4556667775555444333 455677999999999999888777788888866543 44333322
Q ss_pred cCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC-CCCCCcccccccCCcEEEECCccc
Q 009523 284 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF 349 (532)
Q Consensus 284 ~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet-~a~~~~~~~l~~gaDivv~S~sK~ 349 (532)
+ ++..|++..|. --|.+.|.+++++.+++.|.++++--- .+--+...|-++|+||++.|...+
T Consensus 246 -~-~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 246 -K-DVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred -c-ceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 2 58899998887 579999999999999999988765322 122234567789999999987654
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.07 E-value=0.0018 Score=64.92 Aligned_cols=160 Identities=16% Similarity=0.214 Sum_probs=113.7
Q ss_pred HHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCC---EEEEcCCCCcchHHHHHHhcccCCcEEE----EeCCC--
Q 009523 206 VEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITAT----VIDPA-- 274 (532)
Q Consensus 206 Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd---~VIv~~~~y~~t~~~~~~~l~~~Gv~v~----~vd~~-- 274 (532)
.-..++.+.|+. ++-+++|=+.-+..++..+.+|-. +|+...-.|++-.-.+...++..|+.+. .+.+.
T Consensus 116 il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG 195 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG 195 (465)
T ss_pred hhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccc
Confidence 345677788873 344555555666777778887753 6899988898866666566666676532 12211
Q ss_pred ----CHHHHHHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCc
Q 009523 275 ----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 347 (532)
Q Consensus 275 ----dle~Le~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~s 347 (532)
..+++...|+.+ ...+|++...+-.||...|+.+|...-+..|+++=.|=+++.+ ++.....+|+|+.+....
T Consensus 196 EetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSY 275 (465)
T KOG3846|consen 196 EETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSY 275 (465)
T ss_pred ccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeee
Confidence 234444444332 4889999889999999999999997667789999999987654 445556789999999999
Q ss_pred cccCCCCCcEEEEEEeCh
Q 009523 348 KFIGGHNDVLAGSISGSG 365 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~ 365 (532)
||++.+.+-+||+.+-.+
T Consensus 276 KYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 276 KYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred cccccCCCccceeeeehh
Confidence 999876656788777543
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.24 E-value=0.28 Score=50.41 Aligned_cols=181 Identities=19% Similarity=0.199 Sum_probs=103.3
Q ss_pred ccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhh-hCC------Cc---EEEeCCHHHHHHH--HHHHhccCC
Q 009523 173 AYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSAL-EGA------ES---TVIMASGMSASTV--MLLALVPAG 240 (532)
Q Consensus 173 t~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l-~ga------~~---~i~~sSG~~Ai~~--al~all~~G 240 (532)
.|.+++..+.+....+..-.-+|--.. ...++.+.-+++ +|. +. .+-+-||+.|+.. .+.+..-++
T Consensus 69 p~vL~~VrkAE~ql~~~~ldKEYlpI~--Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~ 146 (427)
T KOG1411|consen 69 PYVLPSVRKAEQQLASLSLDKEYLPIT--GLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS 146 (427)
T ss_pred eeeeHHHHHHHHHHhhhcccchhcccc--chHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccc
Confidence 456666665555443333334554332 234455555554 332 11 2334577755544 444445578
Q ss_pred CEEEEcCCCCcchHHHHHHhcccCCcEEEEe---CC----CCHHHHHHhhcCC-CeeEEEE-eCCCCCCCcccC---HHH
Q 009523 241 GHIVTTTDCYRKTRIFIETVLPKMGITATVI---DP----ADMEGLEAALNNN-NVSLFFT-ESPTNPFLRCVD---VKL 308 (532)
Q Consensus 241 d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v---d~----~dle~Le~al~~~-~tklV~l-esP~NptG~v~d---l~~ 308 (532)
..|.+++|+|+.... .....|+.+.++ +. .|.+.+.+.+.+. .-..|++ ...+||||.=.. .++
T Consensus 147 ~~I~ip~PTWgNh~~----if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 147 RDIYIPDPTWGNHKN----IFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred cceeecCCcccccCc----cccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 899999999987553 344556665443 32 2444433333221 1123333 245799997653 668
Q ss_pred HHHHHHhCCCEEEEECCCCCCCcccc----------cccCCc-EEEECCccccCCCCCcEEE
Q 009523 309 VSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGAD-LVLHSATKFIGGHNDVLAG 359 (532)
Q Consensus 309 I~~la~~~gi~lIvDet~a~~~~~~~----------l~~gaD-ivv~S~sK~lgg~gd~~gG 359 (532)
|.++.++.+.+-+.|-+|.++..-+. .+.|.. +++.|+.|.+|--|...|.
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa 284 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGA 284 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccce
Confidence 88889999999999999654322111 122433 6778999999977665443
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.09 E-value=0.016 Score=53.50 Aligned_cols=50 Identities=14% Similarity=0.339 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhh----C--C----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcc
Q 009523 203 TVVVEEKMSALE----G--A----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK 252 (532)
Q Consensus 203 ~~~Le~~lA~l~----g--a----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~ 252 (532)
..+|++++|+++ | . +++++++++++|+..++.+++.|||.|++++|.|++
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 345566666554 4 1 245555555699999999999999999999999974
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=93.89 E-value=0.39 Score=47.56 Aligned_cols=162 Identities=16% Similarity=0.255 Sum_probs=89.7
Q ss_pred HHHHHHhhhCC---CcEEEe--CCHHHHHHHHHHHhc--cCCC-EEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 206 VEEKMSALEGA---ESTVIM--ASGMSASTVMLLALV--PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 206 Le~~lA~l~ga---~~~i~~--sSG~~Ai~~al~all--~~Gd-~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
+.+..-.+.|. ..++++ .+|| .+.+.+..+. +|.. -|+-.+..-.+... . .-..|.+...++.
T Consensus 62 ~a~~~i~l~glhav~nc~vvpl~tgm-slslc~~s~r~krpkakyiiw~ridqks~~k---s-i~~agfepiiie~i~d~ 136 (432)
T KOG3843|consen 62 FAKDAIHLAGLHAVANCFVVPLATGM-SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFK---S-IIHAGFEPIIIENILDG 136 (432)
T ss_pred HHHHHHHHhhhhhhhceeEEeccccc-cHHHHHHHHhhcCCcccEEEEEecchHHHHH---H-HHhcCCCceeeeccccc
Confidence 33333344553 455555 5666 3445555442 3433 34444433322221 1 1123555554432
Q ss_pred ----CCHHHHHHhhcCCCee-EEEEeCCCCC-CCccc-CHHHHHHHHHhCCCEEEEECCCCCCCc------ccccccC-C
Q 009523 274 ----ADMEGLEAALNNNNVS-LFFTESPTNP-FLRCV-DVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-A 339 (532)
Q Consensus 274 ----~dle~Le~al~~~~tk-lV~lesP~Np-tG~v~-dl~~I~~la~~~gi~lIvDet~a~~~~------~~~l~~g-a 339 (532)
.|++.+++.+++.... ++.+.+-+.- .-+.. .+++|+.+|..|+++-+|.++|+.... ....+.| +
T Consensus 137 d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~gri 216 (432)
T KOG3843|consen 137 DELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRI 216 (432)
T ss_pred hHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccH
Confidence 2788888877653233 3333222221 12223 389999999999999999999875321 1112233 5
Q ss_pred cEEEECCccccCCCCCcEEEEEEe--ChHHHHHHHHHh
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLH 375 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~--~~~li~~l~~~~ 375 (532)
|.++.|+-|.|--+ +||.++. ++.+++.+.+..
T Consensus 217 da~vqsldknf~vp---vggaiia~fk~n~iq~iak~y 251 (432)
T KOG3843|consen 217 DAFVQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKMY 251 (432)
T ss_pred HHHHHHhhhcceee---cchhHhhHhHHHHHHHHHHhC
Confidence 88999999998755 4676664 456777766543
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=87.10 E-value=1.8 Score=37.50 Aligned_cols=88 Identities=18% Similarity=0.249 Sum_probs=59.4
Q ss_pred HHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCc
Q 009523 255 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 331 (532)
Q Consensus 255 ~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~ 331 (532)
..+...+++.|.++.+++.+ +.+++.+.+.+.++++|.+.... +.......++++..++. ++.+++=+.+.+..+
T Consensus 18 ~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~~ 95 (121)
T PF02310_consen 18 LYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATADP 95 (121)
T ss_dssp HHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHHH
T ss_pred HHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcCh
Confidence 34455678889999998765 46788777765578888885443 34444567777777775 789998776655444
Q ss_pred ccccc--cCCcEEEE
Q 009523 332 QKALS--LGADLVLH 344 (532)
Q Consensus 332 ~~~l~--~gaDivv~ 344 (532)
...++ .++|.++.
T Consensus 96 ~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 96 EEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHTSEEEEE
T ss_pred HHHhccCcCcceecC
Confidence 34343 57887764
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=82.27 E-value=6.8 Score=33.91 Aligned_cols=90 Identities=13% Similarity=0.066 Sum_probs=55.9
Q ss_pred HHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC---CCEEEEECCCCCCC
Q 009523 255 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATPL 330 (532)
Q Consensus 255 ~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~---gi~lIvDet~a~~~ 330 (532)
.++..+++..|.++.+.... .++++.+.+.+.++.+|.++.-. +.....+.++.+.+++. ++.+++=.......
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~ 94 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRD 94 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCChh
Confidence 44556788889999876543 56777776666578888884432 23335567777777765 56666655433322
Q ss_pred cccccccCCcEEEECC
Q 009523 331 NQKALSLGADLVLHSA 346 (532)
Q Consensus 331 ~~~~l~~gaDivv~S~ 346 (532)
.......|+|.++...
T Consensus 95 ~~~~~~~G~D~~~~~~ 110 (119)
T cd02067 95 FKFLKEIGVDAYFGPA 110 (119)
T ss_pred HHHHHHcCCeEEECCH
Confidence 2233456888877543
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=78.32 E-value=8.4 Score=37.29 Aligned_cols=91 Identities=23% Similarity=0.213 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHHhccCCCEEEE-cCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 224 SGMSASTVMLLALVPAGGHIVT-TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv-~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+|..+ ..++.+|+++|-+|.+ .++. ..... ..++..|+++...|.+|.+.|.++++. ...|++..+......
T Consensus 7 tG~~G-~~v~~~L~~~~~~V~~l~R~~---~~~~~-~~l~~~g~~vv~~d~~~~~~l~~al~g--~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 7 TGNQG-RSVVRALLSAGFSVRALVRDP---SSDRA-QQLQALGAEVVEADYDDPESLVAALKG--VDAVFSVTPPSHPSE 79 (233)
T ss_dssp TSHHH-HHHHHHHHHTTGCEEEEESSS---HHHHH-HHHHHTTTEEEES-TT-HHHHHHHHTT--CSEEEEESSCSCCCH
T ss_pred ccHHH-HHHHHHHHhCCCCcEEEEecc---chhhh-hhhhcccceEeecccCCHHHHHHHHcC--CceEEeecCcchhhh
Confidence 45533 2334445556654433 3333 11112 335567999998999999999999985 566666666544333
Q ss_pred ccCHHHHHHHHHhCCCEEE
Q 009523 303 CVDVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lI 321 (532)
..-...+++.|++.|+-.+
T Consensus 80 ~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEE
T ss_pred hhhhhhHHHhhhccccceE
Confidence 3335578888888775443
No 398
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=75.33 E-value=29 Score=36.40 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=37.7
Q ss_pred CHHHHHHhh----cCCCeeEEEEeC-----CCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 275 DMEGLEAAL----NNNNVSLFFTES-----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 275 dle~Le~al----~~~~tklV~les-----P~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
+++++..++ ...+..+++++. -+..+-...|+..|..+-+.++.++|+|-+++.+.
T Consensus 220 t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 220 TIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 455444433 233457777766 22233466789999988777799999999988764
No 399
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=72.18 E-value=20 Score=30.92 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=50.4
Q ss_pred HHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---CHHHHHHhhcC-CCeeEEEEeCCC--CCCCccc
Q 009523 231 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---DMEGLEAALNN-NNVSLFFTESPT--NPFLRCV 304 (532)
Q Consensus 231 ~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---dle~Le~al~~-~~tklV~lesP~--NptG~v~ 304 (532)
..+..+..-|=+|+.+. +|.. +++..|+++..+... .-.++.+.+.+ .++.+|+. .|+ +......
T Consensus 16 ~~a~~l~~~G~~i~AT~----gTa~----~L~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn-~~~~~~~~~~~~ 86 (112)
T cd00532 16 DLAPKLSSDGFPLFATG----GTSR----VLADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVIN-LRDPRRDRCTDE 86 (112)
T ss_pred HHHHHHHHCCCEEEECc----HHHH----HHHHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEE-cCCCCcccccCC
Confidence 33444445566666543 3333 234467776655321 12445666666 67888765 444 2112455
Q ss_pred CHHHHHHHHHhCCCEEEEEC
Q 009523 305 DVKLVSDLCHKKGAIVCIDG 324 (532)
Q Consensus 305 dl~~I~~la~~~gi~lIvDe 324 (532)
+-..|.+.|-+++++++.+-
T Consensus 87 dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 87 DGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred ChHHHHHHHHHcCCCEEECH
Confidence 67899999999999998763
No 400
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=71.92 E-value=19 Score=34.73 Aligned_cols=123 Identities=16% Similarity=0.150 Sum_probs=72.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCC
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~--~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~ 274 (532)
..|...++-+.+++..++..++-+++++ .++.++ ..+.++.+|++-+..- ......+..+++.|. .+.++..+
T Consensus 29 i~~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la--~~l~~~g~i~tiE~~~-~~~~~A~~~~~~ag~~~~I~~~~gd 105 (205)
T PF01596_consen 29 ISPETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLA--EALPEDGKITTIEIDP-ERAEIARENFRKAGLDDRIEVIEGD 105 (205)
T ss_dssp HHHHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHH--HTSTTTSEEEEEESSH-HHHHHHHHHHHHTTGGGGEEEEES-
T ss_pred cCHHHHHHHHHHHHhcCCceEEEeccccccHHHHHH--HhhcccceEEEecCcH-HHHHHHHHHHHhcCCCCcEEEEEec
Confidence 4566667778888889988887776555 555544 2345566777766543 223344445555554 35544444
Q ss_pred CHHHHHHhhcCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 275 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 275 dle~Le~al~~~---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
-.+.|.+...+. +-.+||+...- ......++.+.++.+ .|.++|+||+..
T Consensus 106 a~~~l~~l~~~~~~~~fD~VFiDa~K--~~y~~y~~~~~~ll~-~ggvii~DN~l~ 158 (205)
T PF01596_consen 106 ALEVLPELANDGEEGQFDFVFIDADK--RNYLEYFEKALPLLR-PGGVIIADNVLW 158 (205)
T ss_dssp HHHHHHHHHHTTTTTSEEEEEEESTG--GGHHHHHHHHHHHEE-EEEEEEEETTTG
T ss_pred cHhhHHHHHhccCCCceeEEEEcccc--cchhhHHHHHhhhcc-CCeEEEEccccc
Confidence 455555555432 47999997642 223333555555554 477999999954
No 401
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=66.23 E-value=20 Score=39.39 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=55.8
Q ss_pred HhcccCC-cEEEEeCCC----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCc
Q 009523 259 TVLPKMG-ITATVIDPA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 331 (532)
Q Consensus 259 ~~l~~~G-v~v~~vd~~----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~ 331 (532)
..++..| .+|.++|.. +.+++.+.+.+.++.+|.+... |.......++++.+++. ++++|+=+.+++..+
T Consensus 30 a~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~~~ 106 (497)
T TIGR02026 30 GALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTFMF 106 (497)
T ss_pred HHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCcCH
Confidence 3466778 688888743 5677777776556888888432 34444566788888875 899999887766554
Q ss_pred ccccc--cCCcEEEE
Q 009523 332 QKALS--LGADLVLH 344 (532)
Q Consensus 332 ~~~l~--~gaDivv~ 344 (532)
...+. .++|+++.
T Consensus 107 ~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 107 HQVLTEAPWIDFIVR 121 (497)
T ss_pred HHHHhcCCCccEEEe
Confidence 44332 25787765
No 402
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=65.96 E-value=1.1e+02 Score=30.49 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=30.8
Q ss_pred CeeEEEEe-CC---CCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC
Q 009523 287 NVSLFFTE-SP---TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 287 ~tklV~le-sP---~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~ 329 (532)
+.++++++ .. .+++-...|+..|..+.+..+.++|+|-++..+
T Consensus 150 n~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 150 KSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 45677776 21 133334678888888888799999999997655
No 403
>PLN02476 O-methyltransferase
Probab=64.42 E-value=51 Score=33.49 Aligned_cols=123 Identities=16% Similarity=0.257 Sum_probs=70.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEe--CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE--EEEeCCC
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIM--ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~--sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~--v~~vd~~ 274 (532)
..|...++...++++.++..++=+ ..|..++.++. .+.++.+|+.-+..- ......+..+++.|+. +..+..+
T Consensus 102 v~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~--al~~~G~V~TiE~d~-e~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 102 VSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL--VLPESGCLVACERDS-NSLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH--hCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 457777888999999998776544 44556665443 244556666654432 2233444456666664 4444433
Q ss_pred CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 275 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 275 dle~Le~al~---~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
-.+.|.+... ..+-.+||+...- .....-++.+.++.+ .|.++|+||+..
T Consensus 179 A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~-~GGvIV~DNvL~ 231 (278)
T PLN02476 179 AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVR-VGGVIVMDNVLW 231 (278)
T ss_pred HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEecCcc
Confidence 3444544332 1246899996653 122222445555554 467788899853
No 404
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=62.82 E-value=1.9e+02 Score=30.21 Aligned_cols=125 Identities=19% Similarity=0.162 Sum_probs=69.5
Q ss_pred EEEeCCHH-HHHHHHHHHhccCC--CEEEEcCCCCcchHHHHH---HhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEE
Q 009523 219 TVIMASGM-SASTVMLLALVPAG--GHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 291 (532)
Q Consensus 219 ~i~~sSG~-~Ai~~al~all~~G--d~VIv~~~~y~~t~~~~~---~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV 291 (532)
.+.++.|+ +.-.--+..|++.| -.+|+-+..|+-....++ .+-+.+ +..+..-+..++++.+.+++. ....|
T Consensus 97 ~~~vsvG~~~~d~er~~~L~~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~a-GAD~i 175 (343)
T TIGR01305 97 NVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILS-GADIV 175 (343)
T ss_pred eEEEEeccCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHc-CCCEE
Confidence 44556666 33333445555543 345555666665433332 222222 344443345578888888875 46666
Q ss_pred EEe-CC-CCCCCccc-----C----HHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEE
Q 009523 292 FTE-SP-TNPFLRCV-----D----VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 344 (532)
Q Consensus 292 ~le-sP-~NptG~v~-----d----l~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~ 344 (532)
.+. .| +|-+++.. | +.++++.++++++++|.|.-.-.+ -..+.+..|+|.|+-
T Consensus 176 kVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMl 240 (343)
T TIGR01305 176 KVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVML 240 (343)
T ss_pred EEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEE
Confidence 653 12 23344432 2 445566666789999999874332 235677889998873
No 405
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=61.70 E-value=83 Score=30.97 Aligned_cols=69 Identities=20% Similarity=0.241 Sum_probs=39.1
Q ss_pred CCCCHHHHHHhhcCCCeeEEEEeCCCCC--CCcc-cC-----HHHHHHHHHhC--CCEEEEECCCCCCCcccccccCCcE
Q 009523 272 DPADMEGLEAALNNNNVSLFFTESPTNP--FLRC-VD-----VKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADL 341 (532)
Q Consensus 272 d~~dle~Le~al~~~~tklV~lesP~Np--tG~v-~d-----l~~I~~la~~~--gi~lIvDet~a~~~~~~~l~~gaDi 341 (532)
+.+.++.++..+.. +..|.+.+.+ | .|.- .+ ++++.++.+++ +..+-+|.-....-.....+.|+|+
T Consensus 127 P~Tp~~~i~~~l~~--vD~VLiMtV~-PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGaD~ 203 (228)
T PRK08091 127 PETPISLLEPYLDQ--IDLIQILTLD-PRTGTKAPSDLILDRVIQVENRLGNRRVEKLISIDGSMTLELASYLKQHQIDW 203 (228)
T ss_pred CCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCE
Confidence 45678899888864 4555554443 3 2322 22 34455555554 4778899753221112334679998
Q ss_pred EE
Q 009523 342 VL 343 (532)
Q Consensus 342 vv 343 (532)
++
T Consensus 204 ~V 205 (228)
T PRK08091 204 VV 205 (228)
T ss_pred EE
Confidence 77
No 406
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=60.75 E-value=37 Score=29.64 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=49.0
Q ss_pred HHhcccCCcEEEEeCCCCHHHHHHhhcC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC--CEEEEECCCCCCCccc-
Q 009523 258 ETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQK- 333 (532)
Q Consensus 258 ~~~l~~~Gv~v~~vd~~dle~Le~al~~-~~tklV~lesP~NptG~v~dl~~I~~la~~~g--i~lIvDet~a~~~~~~- 333 (532)
...++..|+++...+....++..+.+.. .+.++|.+.. .+.......++++..++.+ +++++=..+.+..+..
T Consensus 9 aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~~ 85 (127)
T cd02068 9 AAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEEI 85 (127)
T ss_pred HHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHHH
Confidence 3456667888887776666655555543 3678888843 2233335677788888754 8888766655433322
Q ss_pred ccccCCcEEE
Q 009523 334 ALSLGADLVL 343 (532)
Q Consensus 334 ~l~~gaDivv 343 (532)
....++|+++
T Consensus 86 ~~~~~~D~vv 95 (127)
T cd02068 86 LEEPGVDFVV 95 (127)
T ss_pred hcCCCCCEEE
Confidence 1223455554
No 407
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=58.44 E-value=1.2e+02 Score=28.56 Aligned_cols=108 Identities=17% Similarity=0.064 Sum_probs=57.2
Q ss_pred HHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE--eCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC---cccCHH
Q 009523 234 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFL---RCVDVK 307 (532)
Q Consensus 234 ~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~--vd~~dle~Le~al~~~~tklV~lesP~NptG---~v~dl~ 307 (532)
..+.+.| |.|++...........+-..++..|+.+.. ....+++++.+++.. ....|.+ .|...++ .....+
T Consensus 71 ~~~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~~~~~-~~d~v~~-~~~~~~~~~~~~~~~~ 148 (202)
T cd04726 71 EMAFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGVEDPEKRAKLLKL-GVDIVIL-HRGIDAQAAGGWWPED 148 (202)
T ss_pred HHHHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHC-CCCEEEE-cCcccccccCCCCCHH
Confidence 3334444 666665433222222222345567877764 456677777666654 3555555 3432222 234467
Q ss_pred HHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEE
Q 009523 308 LVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 343 (532)
Q Consensus 308 ~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv 343 (532)
.+.++.+..++++++|.=....-.......|+|.++
T Consensus 149 ~i~~~~~~~~~~i~~~GGI~~~~i~~~~~~Gad~vv 184 (202)
T cd04726 149 DLKKVKKLLGVKVAVAGGITPDTLPEFKKAGADIVI 184 (202)
T ss_pred HHHHHHhhcCCCEEEECCcCHHHHHHHHhcCCCEEE
Confidence 777777667889998864321111233456788665
No 408
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=58.08 E-value=2.4e+02 Score=29.49 Aligned_cols=140 Identities=15% Similarity=0.119 Sum_probs=76.4
Q ss_pred EEEeCCHH-HHHHHHHHHhcc--CCCEEEEcCCCCcchHHHH---HHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEE
Q 009523 219 TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 291 (532)
Q Consensus 219 ~i~~sSG~-~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~---~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV 291 (532)
.+..+.|+ +.-.--+..|+. +|-.+|+-+..|+-....+ +.+-+.+ .+.+.--+..+.+..++++.. ....|
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~a-GAD~v 176 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILS-GADIV 176 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHc-CCCEE
Confidence 34446665 332333344544 4644555566676543333 2222222 344443345578888887765 34444
Q ss_pred EE-------eCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCC-CCCcccccccCCcEEEECCccccCCCCCcEEE
Q 009523 292 FT-------ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHNDVLAG 359 (532)
Q Consensus 292 ~l-------esP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a-~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG 359 (532)
-+ |+---.+|.-.| +.+.++.|+++|+++|.|.-.- .+-..+.+..|+|.|+ +...|+|+-...|-
T Consensus 177 KVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM--lGsllAGt~EsPGe 254 (346)
T PRK05096 177 KVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM--LGGMLAGHEESGGE 254 (346)
T ss_pred EEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE--eChhhcCcccCCCc
Confidence 32 222233444444 5567777889999999998632 2333567788999887 44455555433333
Q ss_pred EE
Q 009523 360 SI 361 (532)
Q Consensus 360 ~l 361 (532)
++
T Consensus 255 ~~ 256 (346)
T PRK05096 255 IV 256 (346)
T ss_pred EE
Confidence 33
No 409
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=58.01 E-value=53 Score=34.17 Aligned_cols=131 Identities=18% Similarity=0.234 Sum_probs=82.2
Q ss_pred HHHHHHHHHhccCCCEEEE-cCCCCcc-hHHHHHHhcccCCcEEEEe-CCCCH-----HHHHHhhcCCCeeEEEEeCCC-
Q 009523 227 SASTVMLLALVPAGGHIVT-TTDCYRK-TRIFIETVLPKMGITATVI-DPADM-----EGLEAALNNNNVSLFFTESPT- 297 (532)
Q Consensus 227 ~Ai~~al~all~~Gd~VIv-~~~~y~~-t~~~~~~~l~~~Gv~v~~v-d~~dl-----e~Le~al~~~~tklV~lesP~- 297 (532)
..|.-+..-+.+.|-.|++ ...+|.. ..+.++...++.|+++..- ...|+ ++++.+..+ +..+|++.+..
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar-~~DvvliDTAGR 232 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKAR-GIDVVLIDTAGR 232 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHc-CCCEEEEeCccc
Confidence 4555555566677866544 4556654 3444555567889888753 24454 567777776 68999998764
Q ss_pred --CCCCcccCHHHHHHHHHhCC------CEEEEECCCCCCCcc--ccc--ccCCcEEEECCccccCCCCCcEEEEEEe
Q 009523 298 --NPFLRCVDVKLVSDLCHKKG------AIVCIDGTFATPLNQ--KAL--SLGADLVLHSATKFIGGHNDVLAGSISG 363 (532)
Q Consensus 298 --NptG~v~dl~~I~~la~~~g------i~lIvDet~a~~~~~--~~l--~~gaDivv~S~sK~lgg~gd~~gG~lv~ 363 (532)
|-..-+-.++.|.+++++.. ++++.|.+.+..... +.+ ..+.|-++ +||.=|.. .||.++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgtA---KGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGTA---KGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccCC---Ccceeee
Confidence 55555556888888888754 778889996643211 111 23556566 67876533 5787764
No 410
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=56.69 E-value=1.4e+02 Score=28.04 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=54.0
Q ss_pred cEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCC
Q 009523 218 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 218 ~~i~~s-SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP 296 (532)
.++++. +|..+- .+...+.+.|.+|++..........+...+....+.++..++..+.+++.+++++ ..+|+..+|
T Consensus 30 ~vlVlGgtG~iG~-~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~diVi~at~ 106 (194)
T cd01078 30 TAVVLGGTGPVGQ-RAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG--ADVVFAAGA 106 (194)
T ss_pred EEEEECCCCHHHH-HHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc--CCEEEECCC
Confidence 466665 365442 3334455667676665443222222222122234666666777788888888864 567777555
Q ss_pred CCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 297 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 297 ~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
. |...+. +.+... ....+++|-.+....
T Consensus 107 ~---g~~~~~--~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 107 A---GVELLE--KLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred C---Cceech--hhhccc-CceeEEEEccCCCCC
Confidence 4 332111 111111 124689998765543
No 411
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=56.63 E-value=59 Score=29.46 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=33.9
Q ss_pred HHHHHhhcCCCeeEEEEeCC--CCCCCcccCHHHHHHHHHhCCCEEEEECC
Q 009523 277 EGLEAALNNNNVSLFFTESP--TNPFLRCVDVKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP--~NptG~v~dl~~I~~la~~~gi~lIvDet 325 (532)
.++.+.+.+.++.+|+. +| .++.+...|...|.+.|-++|++++..-.
T Consensus 65 ~~i~~~I~~g~i~lVIn-t~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 65 QQIGALIAEGKIDMLIF-FRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hhHHHHHHcCceeEEEE-ecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 44666676667777765 44 54444456788999999999999986543
No 412
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=55.91 E-value=95 Score=26.64 Aligned_cols=31 Identities=13% Similarity=0.055 Sum_probs=20.2
Q ss_pred CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEE
Q 009523 287 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 287 ~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lI 321 (532)
+..+|++ + .+|...++-++++.++++|+.++
T Consensus 61 ~~~~i~i-S---~~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 61 GDVVIAI-S---FSGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CCEEEEE-e---CCCCCHHHHHHHHHHHHcCCeEE
Confidence 3445554 3 34665677788888999886554
No 413
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=55.49 E-value=1.5e+02 Score=31.85 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=52.2
Q ss_pred HhccCCCEEEEcCCCCcchHHHHHHhcccCCc---EEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC---CCC-----Ccc
Q 009523 235 ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDPADMEGLEAALNNNNVSLFFTESPT---NPF-----LRC 303 (532)
Q Consensus 235 all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv---~v~~vd~~dle~Le~al~~~~tklV~lesP~---Npt-----G~v 303 (532)
.+.+.+ +|++-..+-.. ..++..+.++|+ .+......+++++.+.+++.+++++++.+.+ ++. |.+
T Consensus 116 ~lA~~~-~vLYVsGEES~--~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsV 192 (456)
T COG1066 116 RLAKRG-KVLYVSGEESL--QQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSV 192 (456)
T ss_pred HHHhcC-cEEEEeCCcCH--HHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcH
Confidence 345566 55544333322 223233455554 2333445689999999987789999998875 333 555
Q ss_pred cCHH----HHHHHHHhCCCEEEE
Q 009523 304 VDVK----LVSDLCHKKGAIVCI 322 (532)
Q Consensus 304 ~dl~----~I~~la~~~gi~lIv 322 (532)
..++ +|.++|++.|+.++.
T Consensus 193 sQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 193 SQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEE
Confidence 4443 688899999976554
No 414
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=54.28 E-value=54 Score=34.59 Aligned_cols=86 Identities=15% Similarity=0.050 Sum_probs=54.8
Q ss_pred HHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC--CCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-ccc
Q 009523 257 IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQK 333 (532)
Q Consensus 257 ~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~--NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~ 333 (532)
++.+-+..+..+..-...+.++.+.+++- ....|++.+-. +-.+...+++.|.++++..++.+++|.-.-.+. ..+
T Consensus 228 i~~ir~~~~~pviiKgV~~~eda~~a~~~-G~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g~Dv~K 306 (361)
T cd04736 228 LRWLRDLWPHKLLVKGIVTAEDAKRCIEL-GADGVILSNHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRGSDIVK 306 (361)
T ss_pred HHHHHHhCCCCEEEecCCCHHHHHHHHHC-CcCEEEECCCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCHHHHHH
Confidence 33333444555555556788888888876 58888884332 112222348888888888889999997654432 235
Q ss_pred ccccCCcEEE
Q 009523 334 ALSLGADLVL 343 (532)
Q Consensus 334 ~l~~gaDivv 343 (532)
.+.+|+|.|.
T Consensus 307 ALaLGA~aV~ 316 (361)
T cd04736 307 ALALGANAVL 316 (361)
T ss_pred HHHcCCCEEE
Confidence 5667776665
No 415
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=52.11 E-value=1.1e+02 Score=26.47 Aligned_cols=58 Identities=14% Similarity=0.169 Sum_probs=37.0
Q ss_pred CCcEEEEeCC---CCHHHHHHhhcCCCeeEEEEeCCC--CCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 264 MGITATVIDP---ADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 264 ~Gv~v~~vd~---~dle~Le~al~~~~tklV~lesP~--NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
.|+++..+.. ..-.++.+.+...++.+|+. +|+ .......|-..|.+.|-+++++++.
T Consensus 44 ~Gi~v~~vk~~~~~g~~~i~~~i~~g~i~~VIn-t~~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGGDQQIGALIAEGEIDAVIF-FRDPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCchhHHHHHHHcCceeEEEE-cCCCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 4666555521 12245666776667777754 554 3333255788999999999998874
No 416
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=51.56 E-value=1.4e+02 Score=29.29 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=43.7
Q ss_pred hcccCCcEEEE--eCCCCHHHHHHhhcCCCeeEEEEeCCCCC--CCccc-C-----HHHHHHHHHhC--CCEEEEECCCC
Q 009523 260 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCV-D-----VKLVSDLCHKK--GAIVCIDGTFA 327 (532)
Q Consensus 260 ~l~~~Gv~v~~--vd~~dle~Le~al~~~~tklV~lesP~Np--tG~v~-d-----l~~I~~la~~~--gi~lIvDet~a 327 (532)
..+..|++.-. -+...++.++..+.. +..|.+.+.+ | .|.-. + ++++.++..++ ++.+-||.--.
T Consensus 105 ~Ir~~g~k~GlalnP~T~~~~i~~~l~~--vD~VlvMtV~-PGf~GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeVDGGI~ 181 (223)
T PRK08745 105 LIKSHGCQAGLVLNPATPVDILDWVLPE--LDLVLVMSVN-PGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVK 181 (223)
T ss_pred HHHHCCCceeEEeCCCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHHHHHHHHHHHHHHHhcCCCeeEEEECCCC
Confidence 34555555433 244678888888864 5555554443 3 23222 2 34444554554 47788997432
Q ss_pred CCCcccccccCCcEEE
Q 009523 328 TPLNQKALSLGADLVL 343 (532)
Q Consensus 328 ~~~~~~~l~~gaDivv 343 (532)
..-.....+.|+|+++
T Consensus 182 ~eti~~l~~aGaDi~V 197 (223)
T PRK08745 182 ADNIGAIAAAGADTFV 197 (223)
T ss_pred HHHHHHHHHcCCCEEE
Confidence 2111233467999887
No 417
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=51.40 E-value=1.2e+02 Score=32.01 Aligned_cols=80 Identities=23% Similarity=0.217 Sum_probs=49.3
Q ss_pred cccCCcEEEEeCC--CCHHHHHHhhc----CCCeeEEEEe-CCCC-C--CCcccCHHHHHHHHHhCCCEEEEECCCCCC-
Q 009523 261 LPKMGITATVIDP--ADMEGLEAALN----NNNVSLFFTE-SPTN-P--FLRCVDVKLVSDLCHKKGAIVCIDGTFATP- 329 (532)
Q Consensus 261 l~~~Gv~v~~vd~--~dle~Le~al~----~~~tklV~le-sP~N-p--tG~v~dl~~I~~la~~~gi~lIvDet~a~~- 329 (532)
+...|..|..-.. .++++++.+++ ..+.++++++ ..++ | +-...|+..|..+-+.+++++++|-.+..+
T Consensus 221 ~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~ 300 (360)
T PRK12595 221 AGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGR 300 (360)
T ss_pred HHccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcc
Confidence 3445666554443 36666665542 2345677776 2222 2 233358999998888899999999988765
Q ss_pred --Cc----ccccccCCc
Q 009523 330 --LN----QKALSLGAD 340 (532)
Q Consensus 330 --~~----~~~l~~gaD 340 (532)
+. ......|+|
T Consensus 301 r~~~~~~a~aAva~GAd 317 (360)
T PRK12595 301 RDLLLPTAKAALAIGAD 317 (360)
T ss_pred hhhHHHHHHHHHHcCCC
Confidence 21 223456777
No 418
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=51.32 E-value=1.1e+02 Score=29.92 Aligned_cols=81 Identities=21% Similarity=0.330 Sum_probs=43.1
Q ss_pred hcccCCcEEEEe--CCCCHHHHHHhhcCCCeeEEEEeCCCCC-CCc--ccC-----HHHHHHHHHhC--CCEEEEECCCC
Q 009523 260 VLPKMGITATVI--DPADMEGLEAALNNNNVSLFFTESPTNP-FLR--CVD-----VKLVSDLCHKK--GAIVCIDGTFA 327 (532)
Q Consensus 260 ~l~~~Gv~v~~v--d~~dle~Le~al~~~~tklV~lesP~Np-tG~--v~d-----l~~I~~la~~~--gi~lIvDet~a 327 (532)
..+..|++.-.. +.+.++.++..+.. +..|.+.+.+ | +|- ..+ ++++.++.+++ ++++.+|.--.
T Consensus 101 ~ik~~g~k~GlalnP~Tp~~~i~~~l~~--~D~vlvMtV~-PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vdGGI~ 177 (220)
T PRK08883 101 LIKEHGCQAGVVLNPATPLHHLEYIMDK--VDLILLMSVN-PGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVK 177 (220)
T ss_pred HHHHcCCcEEEEeCCCCCHHHHHHHHHh--CCeEEEEEec-CCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEECCCC
Confidence 345556554332 44578888888764 5556555443 3 222 222 34444444444 37888986432
Q ss_pred CCCcccccccCCcEEE
Q 009523 328 TPLNQKALSLGADLVL 343 (532)
Q Consensus 328 ~~~~~~~l~~gaDivv 343 (532)
..-.....+.|+|+++
T Consensus 178 ~eni~~l~~aGAd~vV 193 (220)
T PRK08883 178 VDNIREIAEAGADMFV 193 (220)
T ss_pred HHHHHHHHHcCCCEEE
Confidence 1111233467888776
No 419
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=51.29 E-value=58 Score=28.39 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=52.4
Q ss_pred HHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC---CCEEEEECCCCCC
Q 009523 254 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 329 (532)
Q Consensus 254 ~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~---gi~lIvDet~a~~ 329 (532)
..++..+++..|.++.+.-.+ .++++.+++.+.++.+|.++.... -....++++.+..++. ++.+++=......
T Consensus 16 ~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~ 93 (122)
T cd02071 16 AKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGGGIIPPE 93 (122)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEECCCCHH
Confidence 344556688889999887643 466666666555788888855442 2233467777777665 5566664431110
Q ss_pred CcccccccCCcEEEECC
Q 009523 330 LNQKALSLGADLVLHSA 346 (532)
Q Consensus 330 ~~~~~l~~gaDivv~S~ 346 (532)
........|.|-+++..
T Consensus 94 ~~~~~~~~G~d~~~~~~ 110 (122)
T cd02071 94 DYELLKEMGVAEIFGPG 110 (122)
T ss_pred HHHHHHHCCCCEEECCC
Confidence 01112245766666443
No 420
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=51.03 E-value=1.9e+02 Score=28.77 Aligned_cols=123 Identities=16% Similarity=0.166 Sum_probs=70.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCH--HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCCC
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASG--MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 275 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG--~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~d 275 (532)
.|...+|-..+++..++..++=++++ ..++.++. + +.++.+|++-+..- ......+..++..|+ .+..+..+-
T Consensus 64 ~~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~-a-l~~~g~v~tiE~~~-~~~~~Ar~~~~~ag~~~~I~~~~G~a 140 (247)
T PLN02589 64 SADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATAL-A-LPEDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHh-h-CCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEeccH
Confidence 46667777888888888877665544 45554432 2 45566777776542 223333344555553 344444433
Q ss_pred HHHHHHhhcC----CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCC
Q 009523 276 MEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 276 le~Le~al~~----~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~ 328 (532)
.+.|.++... .+..+||+..- .......++.+.++.+ .|.++|+||+...
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~-~GGviv~DNvl~~ 194 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK-VGGVIGYDNTLWN 194 (247)
T ss_pred HHHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC-CCeEEEEcCCCCC
Confidence 4555554321 25789998543 3333334555555554 4777999999543
No 421
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=50.83 E-value=86 Score=31.54 Aligned_cols=91 Identities=12% Similarity=0.141 Sum_probs=54.1
Q ss_pred HHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEe-CCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCccc---
Q 009523 231 VMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCV--- 304 (532)
Q Consensus 231 ~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v-d~~-dle~Le~al~~~~tklV~lesP~NptG~v~--- 304 (532)
..+..+.+.| |-|++++..+.....+. ..++.+|+...++ .+. ..+.++...+. ....||+.+-...||.-.
T Consensus 110 ~F~~~~~~aGvdgviipDLP~ee~~~~~-~~~~~~gi~~I~lv~PtT~~eri~~i~~~-a~gFIY~vS~~GvTG~~~~~~ 187 (263)
T CHL00200 110 KFIKKISQAGVKGLIIPDLPYEESDYLI-SVCNLYNIELILLIAPTSSKSRIQKIARA-APGCIYLVSTTGVTGLKTELD 187 (263)
T ss_pred HHHHHHHHcCCeEEEecCCCHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHh-CCCcEEEEcCCCCCCCCcccc
Confidence 3344444555 77888887665433333 4567778776553 333 45666665554 244778767666788742
Q ss_pred -CHHHHHHHHHhC-CCEEEEE
Q 009523 305 -DVKLVSDLCHKK-GAIVCID 323 (532)
Q Consensus 305 -dl~~I~~la~~~-gi~lIvD 323 (532)
.++++.+..+++ +.++++|
T Consensus 188 ~~~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 188 KKLKKLIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHHHHHHhcCCCEEEE
Confidence 255556555554 6777775
No 422
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=50.75 E-value=2.5e+02 Score=27.46 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=63.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE--EEEeCCC
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~--~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~--v~~vd~~ 274 (532)
..|...++-..+++..++..++=+++|+ .++.+ ...+.++.+|+.-+..-. .....+..++..|+. +..+..+
T Consensus 52 v~~~~g~~L~~l~~~~~~~~vLEiGt~~G~s~l~l--a~~~~~~g~v~tiD~d~~-~~~~A~~n~~~~gl~~~i~~~~gd 128 (234)
T PLN02781 52 VPVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTT--ALALPEDGRITAIDIDKE-AYEVGLEFIKKAGVDHKINFIQSD 128 (234)
T ss_pred cCHHHHHHHHHHHHHhCCCEEEEecCcccHHHHHH--HHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcc
Confidence 3455566777888888888776666555 44433 233444457766654432 223344445555543 3333333
Q ss_pred CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 275 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 275 dle~Le~al~---~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
-.+.|.+... ..+..+||+...-.+.- .-++.+.++.+ .|.++++||+..
T Consensus 129 a~~~L~~l~~~~~~~~fD~VfiDa~k~~y~--~~~~~~~~ll~-~GG~ii~dn~l~ 181 (234)
T PLN02781 129 ALSALDQLLNNDPKPEFDFAFVDADKPNYV--HFHEQLLKLVK-VGGIIAFDNTLW 181 (234)
T ss_pred HHHHHHHHHhCCCCCCCCEEEECCCHHHHH--HHHHHHHHhcC-CCeEEEEEcCCc
Confidence 2333433321 12478899854321111 11344444444 466888899854
No 423
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=50.67 E-value=75 Score=29.04 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
+|.-+- .++..+++.|-+|.+....-.. ... ..++++...|..|++.+.+++.. ...|+...+.++. ..
T Consensus 7 tG~vG~-~l~~~L~~~~~~V~~~~R~~~~----~~~---~~~~~~~~~d~~d~~~~~~al~~--~d~vi~~~~~~~~-~~ 75 (183)
T PF13460_consen 7 TGFVGR-ALAKQLLRRGHEVTALVRSPSK----AED---SPGVEIIQGDLFDPDSVKAALKG--ADAVIHAAGPPPK-DV 75 (183)
T ss_dssp TSHHHH-HHHHHHHHTTSEEEEEESSGGG----HHH---CTTEEEEESCTTCHHHHHHHHTT--SSEEEECCHSTTT-HH
T ss_pred CChHHH-HHHHHHHHCCCEEEEEecCchh----ccc---ccccccceeeehhhhhhhhhhhh--cchhhhhhhhhcc-cc
Confidence 344332 3455666777666554333221 111 56888888899999999999985 4555554433222 33
Q ss_pred cCHHHHHHHHHhCCC
Q 009523 304 VDVKLVSDLCHKKGA 318 (532)
Q Consensus 304 ~dl~~I~~la~~~gi 318 (532)
...+.+.+.|++.|+
T Consensus 76 ~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred ccccccccccccccc
Confidence 335677777777664
No 424
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=50.57 E-value=1.7e+02 Score=29.94 Aligned_cols=103 Identities=11% Similarity=0.094 Sum_probs=54.1
Q ss_pred hhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEc--CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCe
Q 009523 213 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 288 (532)
Q Consensus 213 l~ga~~~i~~sSG~~Ai~~al~all~~Gd--~VIv~--~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~t 288 (532)
+....+.|++-+-+..+...+....+.|. +|++. +|.+.| ..+. ..|...|++++++... .+-..+. ++
T Consensus 112 ~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a-~~L~~~gI~vtlI~Ds---a~~~~m~--~v 184 (301)
T TIGR00511 112 RIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITA-KELRDYGIPVTLIVDS---AVRYFMK--EV 184 (301)
T ss_pred HcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHH-HHHHHCCCCEEEEehh---HHHHHHH--hC
Confidence 34334566665544444444444444443 45444 344444 3333 4566789999987532 3333343 25
Q ss_pred eEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEE
Q 009523 289 SLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 289 klV~lesP~-NptG~v~d---l~~I~~la~~~gi~lIv 322 (532)
..|++-.=. -..|.+.. --.++-+|+.++++++|
T Consensus 185 d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 185 DHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 555551110 12344433 23677788999998886
No 425
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=50.34 E-value=1.6e+02 Score=30.36 Aligned_cols=104 Identities=12% Similarity=0.128 Sum_probs=55.2
Q ss_pred hhhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEc--CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCC
Q 009523 212 ALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNN 287 (532)
Q Consensus 212 ~l~ga~~~i~~sSG~~Ai~~al~all~~Gd--~VIv~--~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~ 287 (532)
++....+.|++-+-+..+...+....+.|. +|++. +|...| ..+. ..|...|++++.+... .+-..+. +
T Consensus 116 ~~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a-~~L~~~GI~vtlI~Ds---av~~~m~--~ 188 (310)
T PRK08535 116 KRIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITA-KELAEYGIPVTLIVDS---AVRYFMK--D 188 (310)
T ss_pred HHcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHH-HHHHHCCCCEEEEehh---HHHHHHH--h
Confidence 344434566665545444444554444443 45554 333344 3333 4466779999987633 3333343 3
Q ss_pred eeEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEE
Q 009523 288 VSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 288 tklV~lesP~-NptG~v~d---l~~I~~la~~~gi~lIv 322 (532)
+..|++-.=. -..|.+.. --.++-+|+.++++++|
T Consensus 189 vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 189 VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 5556652110 23354443 23677788999998886
No 426
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=49.77 E-value=76 Score=28.32 Aligned_cols=72 Identities=14% Similarity=0.018 Sum_probs=44.9
Q ss_pred CCcchHHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC---CCEEEE
Q 009523 249 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCI 322 (532)
Q Consensus 249 ~y~~t~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~---gi~lIv 322 (532)
.|---.++...+++..|++|.....+ .++++.++..+++..+|.+++-. +....-++++.+..++. ++.+++
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 34333455666788889999876543 45555444444478888885554 33334467788777775 355655
No 427
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=49.60 E-value=1.3e+02 Score=30.12 Aligned_cols=92 Identities=11% Similarity=0.072 Sum_probs=51.2
Q ss_pred HHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEE-EeCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcc----
Q 009523 231 VMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRC---- 303 (532)
Q Consensus 231 ~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~-~vd~-~dle~Le~al~~~~tklV~lesP~NptG~v---- 303 (532)
..+..+.+.| |.|++++..+..... +...++..|+... .+.+ .+.+.++..++. ....||+.+.+..||.-
T Consensus 106 ~f~~~~~~aGvdgviipDlp~ee~~~-~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~-~~gfiy~vs~~G~TG~~~~~~ 183 (256)
T TIGR00262 106 EFYAKCKEVGVDGVLVADLPLEESGD-LVEAAKKHGVKPIFLVAPNADDERLKQIAEK-SQGFVYLVSRAGVTGARNRAA 183 (256)
T ss_pred HHHHHHHHcCCCEEEECCCChHHHHH-HHHHHHHCCCcEEEEECCCCCHHHHHHHHHh-CCCCEEEEECCCCCCCcccCC
Confidence 3344444555 678887766543323 2245677787755 3433 456666666654 23367776666677763
Q ss_pred cCHHHHHHHHHh-CCCEEEEEC
Q 009523 304 VDVKLVSDLCHK-KGAIVCIDG 324 (532)
Q Consensus 304 ~dl~~I~~la~~-~gi~lIvDe 324 (532)
.++.+..+..++ .+.++++|.
T Consensus 184 ~~~~~~i~~lr~~~~~pi~vgf 205 (256)
T TIGR00262 184 SALNELVKRLKAYSAKPVLVGF 205 (256)
T ss_pred hhHHHHHHHHHhhcCCCEEEeC
Confidence 234444444444 466777764
No 428
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=49.37 E-value=1.8e+02 Score=29.94 Aligned_cols=88 Identities=9% Similarity=0.062 Sum_probs=48.1
Q ss_pred HHHHhccCCC--EEEEc--CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC-CCCCcccC-
Q 009523 232 MLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD- 305 (532)
Q Consensus 232 al~all~~Gd--~VIv~--~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~-NptG~v~d- 305 (532)
++....+.|. +|++. +|.+.|...+. ..|...|++++++.. ..+...+...++..|++-.=. -..|.+..
T Consensus 142 ~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a-~~L~~~gI~vtlI~D---sa~~~~m~~~~vd~VlvGAd~v~~nG~v~nk 217 (303)
T TIGR00524 142 VIRSAWEDGKRIRVIACETRPRNQGSRLTA-WELMQDGIDVTLITD---SMAAYFMQKGEIDAVIVGADRIARNGDVANK 217 (303)
T ss_pred HHHHHHHcCCceEEEECCCCCccchHHHHH-HHHHHCCCCEEEECh---hHHHHHccccCCCEEEEcccEEecCCCEeEh
Confidence 3444444443 45554 45555534333 346678999998752 334444442246666662111 23344433
Q ss_pred --HHHHHHHHHhCCCEEEEE
Q 009523 306 --VKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 306 --l~~I~~la~~~gi~lIvD 323 (532)
--.++-+|+.+++++++=
T Consensus 218 ~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 218 IGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred hhHHHHHHHHHHhCCCEEEe
Confidence 236777789999988873
No 429
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=47.99 E-value=67 Score=35.28 Aligned_cols=110 Identities=20% Similarity=0.162 Sum_probs=62.1
Q ss_pred HHHhccCCCEEEEcCCCCcchH---HHHHHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEE-eCCC-CCCCcc---
Q 009523 233 LLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-ESPT-NPFLRC--- 303 (532)
Q Consensus 233 l~all~~Gd~VIv~~~~y~~t~---~~~~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~l-esP~-NptG~v--- 303 (532)
+..++..|-.+++-+..|+... ..++.+...+ ++.+..-+..+.++.+.+++- ....|-+ -.|. +-+++.
T Consensus 233 a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~~p~~~vi~g~v~t~e~a~~l~~a-Gad~i~vg~g~gs~~~~r~~~~ 311 (486)
T PRK05567 233 AEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAKYPDVQIIAGNVATAEAARALIEA-GADAVKVGIGPGSICTTRIVAG 311 (486)
T ss_pred HHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhhCCCCCEEEeccCCHHHHHHHHHc-CCCEEEECCCCCccccceeecC
Confidence 3445555644555554454322 2233333333 555555566678888887765 4666644 1232 223331
Q ss_pred ---cCHH---HHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEE
Q 009523 304 ---VDVK---LVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 343 (532)
Q Consensus 304 ---~dl~---~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv 343 (532)
.++. ++++.++++++++|.|.=...+. ..+.+.+|+|.++
T Consensus 312 ~g~p~~~~~~~~~~~~~~~~~~viadGGi~~~~di~kAla~GA~~v~ 358 (486)
T PRK05567 312 VGVPQITAIADAAEAAKKYGIPVIADGGIRYSGDIAKALAAGASAVM 358 (486)
T ss_pred CCcCHHHHHHHHHHHhccCCCeEEEcCCCCCHHHHHHHHHhCCCEEE
Confidence 2344 44555667899999998755442 3567788999887
No 430
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=47.78 E-value=12 Score=31.27 Aligned_cols=79 Identities=16% Similarity=0.126 Sum_probs=43.2
Q ss_pred HHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe----CCC-CHH---HHHHhhcCCCeeEEEEeCCCCCCCccc-
Q 009523 234 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI----DPA-DME---GLEAALNNNNVSLFFTESPTNPFLRCV- 304 (532)
Q Consensus 234 ~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v----d~~-dle---~Le~al~~~~tklV~lesP~NptG~v~- 304 (532)
+.+..-|=+|+.+. +|. .+++..|+++..+ ... .++ ++.+.++.+++.+|+. +|..-.....
T Consensus 7 ~~l~~lG~~i~AT~----gTa----~~L~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~IdlVIn-~~~~~~~~~~~ 77 (95)
T PF02142_consen 7 KRLAELGFEIYATE----GTA----KFLKEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGKIDLVIN-TPYPFSDQEHT 77 (95)
T ss_dssp HHHHHTTSEEEEEH----HHH----HHHHHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTSEEEEEE-E--THHHHHTH
T ss_pred HHHHHCCCEEEECh----HHH----HHHHHcCCCceeeeeecccCccCCchhHHHHHHHcCCeEEEEE-eCCCCcccccC
Confidence 34445565666543 333 2345667773333 222 112 3677777777887765 5553333333
Q ss_pred CHHHHHHHHHhCCCEEE
Q 009523 305 DVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 305 dl~~I~~la~~~gi~lI 321 (532)
|-..|.+.|-+++++++
T Consensus 78 dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 78 DGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHHHHHTTSHEE
T ss_pred CcHHHHHHHHHcCCCCc
Confidence 67789999999999875
No 431
>PRK14057 epimerase; Provisional
Probab=47.43 E-value=1.5e+02 Score=29.81 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=40.9
Q ss_pred eCCCCHHHHHHhhcCCCeeEEEEeCCCCC--CCcc-cC-----HHHHHHHHHhCC--CEEEEECCCCCCCcccccccCCc
Q 009523 271 IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRC-VD-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGAD 340 (532)
Q Consensus 271 vd~~dle~Le~al~~~~tklV~lesP~Np--tG~v-~d-----l~~I~~la~~~g--i~lIvDet~a~~~~~~~l~~gaD 340 (532)
-+...++.++..+.. +..|.+.+.+ | .|.- .+ ++++.++.+++| +.+-+|.-....-.....+.|+|
T Consensus 140 nP~Tp~e~i~~~l~~--vD~VLvMtV~-PGfgGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGad 216 (254)
T PRK14057 140 CPATPLDVIIPILSD--VEVIQLLAVN-PGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGID 216 (254)
T ss_pred CCCCCHHHHHHHHHh--CCEEEEEEEC-CCCCchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCC
Confidence 355678999988865 5555554443 3 2322 22 444555555554 78899975432222234567999
Q ss_pred EEE
Q 009523 341 LVL 343 (532)
Q Consensus 341 ivv 343 (532)
+++
T Consensus 217 ~~V 219 (254)
T PRK14057 217 RVV 219 (254)
T ss_pred EEE
Confidence 887
No 432
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=47.22 E-value=86 Score=25.58 Aligned_cols=44 Identities=9% Similarity=-0.013 Sum_probs=28.6
Q ss_pred HHHHHhhcCCCeeEEEEeCCCC-CCCcccCHHHHHHHHHhCCCEEE
Q 009523 277 EGLEAALNNNNVSLFFTESPTN-PFLRCVDVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP~N-ptG~v~dl~~I~~la~~~gi~lI 321 (532)
..+.+.++..++.+|+. +|.. ..-...|-..|.+.|-+++++++
T Consensus 45 ~~i~~~i~~g~id~VIn-~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 45 LAILDLIKNGEIDLVIN-TLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred HHHHHHhcCCCeEEEEE-CCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 34666676667888775 4442 11123356689999999998875
No 433
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=46.35 E-value=92 Score=31.19 Aligned_cols=100 Identities=24% Similarity=0.302 Sum_probs=56.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcc----hHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEE
Q 009523 217 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK----TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 292 (532)
Q Consensus 217 ~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~----t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~ 292 (532)
.-.|.|++|.....++..+.-.-||.|+.-.-..+- ...-....++..|++..+++.+-++ ++ +
T Consensus 19 kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~-------~~-----~ 86 (269)
T COG1606 19 KVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD-------PE-----F 86 (269)
T ss_pred eEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc-------hh-----h
Confidence 347889999855444444433346765443322222 2222333466778888777643222 10 1
Q ss_pred EeCCCCCCCcccC--HHHHHHHHHhCCCEEEEECCCCC
Q 009523 293 TESPTNPFLRCVD--VKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 293 lesP~NptG~v~d--l~~I~~la~~~gi~lIvDet~a~ 328 (532)
..+|.|+.-.+-. .+.|.+.++++|.-+|+|.|-++
T Consensus 87 ~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 87 KENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 2244444333322 56789999999999999999443
No 434
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=45.67 E-value=1.5e+02 Score=29.82 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=52.3
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEc--CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeE
Q 009523 215 GAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSL 290 (532)
Q Consensus 215 ga~~~i~~sSG~~Ai~~al~all~~Gd--~VIv~--~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tkl 290 (532)
...+.|++-+-+..+..++....+.|. +|++. +|.+.| ..+. ..+...|+++++++. ..+-..+.. ++..
T Consensus 106 ~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~~~a-~~L~~~gi~v~~i~d---~~~~~~m~~-~vd~ 179 (282)
T PF01008_consen 106 NDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-RLMA-KELAEAGIPVTLIPD---SAVGYVMPR-DVDK 179 (282)
T ss_dssp -TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-HTHH-HHHHHTT-EEEEE-G---GGHHHHHHC-TESE
T ss_pred cCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhh-hhHH-HHhhhcceeEEEEec---hHHHHHHHH-hCCe
Confidence 334566666666556666665555553 34444 333333 3333 345667999998863 334444443 2566
Q ss_pred EEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEEE
Q 009523 291 FFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 291 V~lesP~-NptG~v~d---l~~I~~la~~~gi~lIvD 323 (532)
|++-.=. -..|.+.. -..++-+|++++++++|=
T Consensus 180 VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 180 VLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp EEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred eEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 6652211 12343332 346777889999998874
No 435
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=45.31 E-value=1.1e+02 Score=24.01 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=29.4
Q ss_pred CcEEEEeCCCCHHHHH--HhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 265 GITATVIDPADMEGLE--AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 265 Gv~v~~vd~~dle~Le--~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
|.++..++.......+ ..+++ +.-+|++ + ..|...++.++++.++++|+.+|.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~i-S---~sg~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 25 GIEVVALIATELEHASLLSLLRK-GDVVIAL-S---YSGRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcCCC-CCEEEEE-E---CCCCCHHHHHHHHHHHHcCCeEEE
Confidence 6655555433332222 23333 3344444 2 335566778888999998877653
No 436
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=45.04 E-value=2.1e+02 Score=29.40 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=58.6
Q ss_pred hhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEc--CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCe
Q 009523 213 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 288 (532)
Q Consensus 213 l~ga~~~i~~sSG~~Ai~~al~all~~Gd--~VIv~--~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~t 288 (532)
+....+.|++-+-+.++..++....+.|. +|++. .|.+.|. .+...|+..|+++..+.- .++-..++ ++
T Consensus 116 ~i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~--~~ak~L~~~gI~~~~I~D---sa~~~~~~--~v 188 (301)
T COG1184 116 RIHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGR--IMAKELRQSGIPVTVIVD---SAVGAFMS--RV 188 (301)
T ss_pred hccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHH--HHHHHHHHcCCceEEEec---hHHHHHHH--hC
Confidence 33334677777767666666666666665 45554 4666553 233567888998887642 22333343 24
Q ss_pred eEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEE
Q 009523 289 SLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 289 klV~lesP~-NptG~v~d---l~~I~~la~~~gi~lIv 322 (532)
..|++-.=. --.|.+.. --.|+..||+.++++++
T Consensus 189 d~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 189 DKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred CEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 555551110 01233332 24678889999988775
No 437
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=43.44 E-value=1.1e+02 Score=23.67 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=35.1
Q ss_pred HhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEE
Q 009523 259 TVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 259 ~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvD 323 (532)
..++..|+++..+... .++++. . +..+|++ .|.-..-.-.++++|.++.++=|-++|+|
T Consensus 12 ~~L~~~g~~v~~~~~~-~~~l~~---~-~~tll~i-~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 12 QLLEEQGVKVERWRKP-YEALEA---D-DGTLLVI-GPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHCCCeeEEeccc-HHHhCC---C-CCEEEEE-eCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 5667779998876543 444432 2 3455555 44412111245788999888777777764
No 438
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=42.56 E-value=1.3e+02 Score=33.21 Aligned_cols=109 Identities=19% Similarity=0.176 Sum_probs=66.6
Q ss_pred HHhccCCCEEEEcCCCCcchHH---HHHHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEEeC-CC----CC--C--
Q 009523 234 LALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTES-PT----NP--F-- 300 (532)
Q Consensus 234 ~all~~Gd~VIv~~~~y~~t~~---~~~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~les-P~----Np--t-- 300 (532)
..+++.|--||+-+..++-... .++.+-+.+ +..+..-+..+.++-+.+++. ...+|.+.. +. ++ +
T Consensus 254 ~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~a-GaD~i~vg~g~G~~~~t~~~~~~ 332 (505)
T PLN02274 254 EHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQA-GVDGLRVGMGSGSICTTQEVCAV 332 (505)
T ss_pred HHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHc-CcCEEEECCCCCccccCcccccc
Confidence 4566677555665666655433 333332333 455554466778888888766 467776621 11 11 2
Q ss_pred C--cccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEE
Q 009523 301 L--RCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 343 (532)
Q Consensus 301 G--~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv 343 (532)
| ...++..+.+++++.++++|.|.-...+ -..+.+..|+|.|+
T Consensus 333 g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 333 GRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred CCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 2 2235777888999999999999875543 23466778988776
No 439
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=41.95 E-value=1.6e+02 Score=24.97 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=51.1
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC--CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc
Q 009523 227 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCV 304 (532)
Q Consensus 227 ~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--~dle~Le~al~~~~tklV~lesP~NptG~v~ 304 (532)
+.+...+..+.+-|=+|..+. +|.. .++..|+.+..+.. ..-.++.+.+++.+..+|+. .|+... ...
T Consensus 13 ~~~~~~~~~l~~~G~~l~aT~----gT~~----~l~~~gi~~~~v~~~~~~~~~i~~~i~~~~id~vIn-~~~~~~-~~~ 82 (110)
T cd01424 13 PEAVEIAKRLAELGFKLVATE----GTAK----YLQEAGIPVEVVNKVSEGRPNIVDLIKNGEIQLVIN-TPSGKR-AIR 82 (110)
T ss_pred hHHHHHHHHHHHCCCEEEEch----HHHH----HHHHcCCeEEEEeecCCCchhHHHHHHcCCeEEEEE-CCCCCc-cCc
Confidence 334444555566677776543 3333 34446777655432 22355666776656776664 454222 233
Q ss_pred CHHHHHHHHHhCCCEEEEE
Q 009523 305 DVKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 305 dl~~I~~la~~~gi~lIvD 323 (532)
+-..|.+.|-++|++++..
T Consensus 83 ~~~~iRR~Av~~~ipl~T~ 101 (110)
T cd01424 83 DGFSIRRAALEYKVPYFTT 101 (110)
T ss_pred cHHHHHHHHHHhCCCEEec
Confidence 4568999999999999854
No 440
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=41.69 E-value=1.6e+02 Score=24.94 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=50.9
Q ss_pred HHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCc
Q 009523 255 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 331 (532)
Q Consensus 255 ~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~ 331 (532)
..+...++..|.++.+.... ..+++.+.+.+.++++|.+..-. +.....++.+.++.+++ ++.+++=....+..+
T Consensus 17 ~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~--~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~~~ 94 (125)
T cd02065 17 NIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS--TTHMEAMKLVIEALKELGIDIPVVVGGAHPTADP 94 (125)
T ss_pred HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch--HhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCccc
Confidence 34445677889998887644 45666666655578888884332 11223456666666666 588888776554433
Q ss_pred ccccccCCcEEE
Q 009523 332 QKALSLGADLVL 343 (532)
Q Consensus 332 ~~~l~~gaDivv 343 (532)
.. ...|+++
T Consensus 95 ~~---~~~d~~~ 103 (125)
T cd02065 95 EE---PKVDAVV 103 (125)
T ss_pred cc---cccceee
Confidence 22 3456655
No 441
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=40.49 E-value=4.4e+02 Score=27.29 Aligned_cols=109 Identities=22% Similarity=0.146 Sum_probs=57.9
Q ss_pred HHHhccCCCEEEEcCCCCcch---HHHHHHhcccCC--cEEEEeCCCCHHHHHHhhcCCCeeEEEEe-CCC-CC-----C
Q 009523 233 LLALVPAGGHIVTTTDCYRKT---RIFIETVLPKMG--ITATVIDPADMEGLEAALNNNNVSLFFTE-SPT-NP-----F 300 (532)
Q Consensus 233 l~all~~Gd~VIv~~~~y~~t---~~~~~~~l~~~G--v~v~~vd~~dle~Le~al~~~~tklV~le-sP~-Np-----t 300 (532)
+..+++.|=.+|.-+..++.. ...++. ++..+ +.+..-...+.+..+++++. ....|.+. .|. +- +
T Consensus 99 ~~~l~eagv~~I~vd~~~G~~~~~~~~i~~-ik~~~p~v~Vi~G~v~t~~~A~~l~~a-GaD~I~vg~g~G~~~~t~~~~ 176 (325)
T cd00381 99 AEALVEAGVDVIVIDSAHGHSVYVIEMIKF-IKKKYPNVDVIAGNVVTAEAARDLIDA-GADGVKVGIGPGSICTTRIVT 176 (325)
T ss_pred HHHHHhcCCCEEEEECCCCCcHHHHHHHHH-HHHHCCCceEEECCCCCHHHHHHHHhc-CCCEEEECCCCCcCcccceeC
Confidence 445566664444444444432 222322 22222 45443355677777777765 47777662 121 11 1
Q ss_pred CcccC----HHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEE
Q 009523 301 LRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 343 (532)
Q Consensus 301 G~v~d----l~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv 343 (532)
|.-.| +.++.+.++++++++|.|.=...+ -..+.+..|+|.+.
T Consensus 177 g~g~p~~~~i~~v~~~~~~~~vpVIA~GGI~~~~di~kAla~GA~~Vm 224 (325)
T cd00381 177 GVGVPQATAVADVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVM 224 (325)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 11122 456666677789999988654432 22455678888765
No 442
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=40.40 E-value=40 Score=35.43 Aligned_cols=120 Identities=19% Similarity=0.226 Sum_probs=66.8
Q ss_pred HHhccCCCEEEEcCCCCcchHHH---HHHhcccCC-cEEEEeCCCCHHHHHHhhcCCCeeEEEEe-CCCC------CCCc
Q 009523 234 LALVPAGGHIVTTTDCYRKTRIF---IETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PFLR 302 (532)
Q Consensus 234 ~all~~Gd~VIv~~~~y~~t~~~---~~~~l~~~G-v~v~~vd~~dle~Le~al~~~~tklV~le-sP~N------ptG~ 302 (532)
..|++.|-.+|+-+..|+.+... ++.+-+.++ +.+.--+..+.+..+.+++. ....|-+- .|.. .+|.
T Consensus 114 ~~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~~~~~~viaGNV~T~e~a~~L~~a-Gad~vkVGiGpGsiCtTr~v~Gv 192 (352)
T PF00478_consen 114 EALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKKFPDVPVIAGNVVTYEGAKDLIDA-GADAVKVGIGPGSICTTREVTGV 192 (352)
T ss_dssp HHHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHHSTTSEEEEEEE-SHHHHHHHHHT-T-SEEEESSSSSTTBHHHHHHSB
T ss_pred HHHHHcCCCEEEccccCccHHHHHHHHHHHHHhCCCceEEecccCCHHHHHHHHHc-CCCEEEEeccCCccccccccccc
Confidence 34555664455555555544332 223333444 55554445578888888876 46666661 1211 1222
Q ss_pred ccC----HHHHHHHHHhCCCEEEEECCCC-CCCcccccccCCcEEEECCccccCCCCCc
Q 009523 303 CVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHNDV 356 (532)
Q Consensus 303 v~d----l~~I~~la~~~gi~lIvDet~a-~~~~~~~l~~gaDivv~S~sK~lgg~gd~ 356 (532)
=.| +.+.++.++++++++|.|.=.- .+-..+.+..|+|.|+ +...|+|.-..
T Consensus 193 G~PQ~tAv~~~a~~a~~~~v~iIADGGi~~sGDi~KAla~GAd~VM--lG~llAgt~Es 249 (352)
T PF00478_consen 193 GVPQLTAVYECAEAARDYGVPIIADGGIRTSGDIVKALAAGADAVM--LGSLLAGTDES 249 (352)
T ss_dssp SCTHHHHHHHHHHHHHCTTSEEEEESS-SSHHHHHHHHHTT-SEEE--ESTTTTTBTTS
T ss_pred CCcHHHHHHHHHHHhhhccCceeecCCcCcccceeeeeeeccccee--echhhccCcCC
Confidence 233 5577777888999999998532 2333577889999888 55666665443
No 443
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=39.14 E-value=1.8e+02 Score=30.35 Aligned_cols=115 Identities=13% Similarity=0.070 Sum_probs=59.2
Q ss_pred HHHHHHHHhhhC--C--Cc-EEEeCCHHHHHHHHHHHhccCCCEE--EEcCCCCcch--HHHHHHhcccCCcEEEEeCCC
Q 009523 204 VVVEEKMSALEG--A--ES-TVIMASGMSASTVMLLALVPAGGHI--VTTTDCYRKT--RIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 204 ~~Le~~lA~l~g--a--~~-~i~~sSG~~Ai~~al~all~~Gd~V--Iv~~~~y~~t--~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
.+|++.+.++-+ . -+ .|.+++|..+..++....-.-|..+ +.-++.+..- ...++.+++.+|++...+..
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~- 121 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI- 121 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC-
Confidence 345555555432 1 23 4556677644333321111224433 3445555432 22455567778988876654
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCCCCccc--CHHHHHHHHHhCCCEEEEECC
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~NptG~v~--dl~~I~~la~~~gi~lIvDet 325 (532)
|.+.+...... ..+ ...+|...+. ....+.++|+++|+.+|+.+.
T Consensus 122 d~~~~~~l~~~-~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~ 168 (343)
T TIGR03573 122 NPETFRKLQRA-YFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGE 168 (343)
T ss_pred CHHHHHHHHHH-HHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCC
Confidence 34444443322 111 2233433322 256788999999999998876
No 444
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=39.06 E-value=2.7e+02 Score=29.80 Aligned_cols=109 Identities=15% Similarity=0.051 Sum_probs=54.0
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE--eCCCCH-HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHH
Q 009523 233 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 308 (532)
Q Consensus 233 l~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~--vd~~dl-e~Le~al~~~~tklV~lesP~NptG~v~dl~~ 308 (532)
+..+.+.| |.+.+..-.-..+........+.+|+.+.. +.+.++ +.++.. .. .+..|.+.+--+|.+.-...+.
T Consensus 243 v~~~a~aGAD~vTVH~ea~~~ti~~ai~~akk~GikvgVD~lnp~tp~e~i~~l-~~-~vD~Vllht~vdp~~~~~~~~k 320 (391)
T PRK13307 243 ARMAADATADAVVISGLAPISTIEKAIHEAQKTGIYSILDMLNVEDPVKLLESL-KV-KPDVVELHRGIDEEGTEHAWGN 320 (391)
T ss_pred HHHHHhcCCCEEEEeccCCHHHHHHHHHHHHHcCCEEEEEEcCCCCHHHHHHHh-hC-CCCEEEEccccCCCcccchHHH
Confidence 33444555 555543322111222222446677877653 123334 444443 33 4677777554455444334455
Q ss_pred HHHHHH-hCCCEEEEECCCCCCCcccccccCCcEEE
Q 009523 309 VSDLCH-KKGAIVCIDGTFATPLNQKALSLGADLVL 343 (532)
Q Consensus 309 I~~la~-~~gi~lIvDet~a~~~~~~~l~~gaDivv 343 (532)
|.++.+ ..++.+.+|.=-...-.......|+|+++
T Consensus 321 I~~ikk~~~~~~I~VdGGI~~eti~~l~~aGADivV 356 (391)
T PRK13307 321 IKEIKKAGGKILVAVAGGVRVENVEEALKAGADILV 356 (391)
T ss_pred HHHHHHhCCCCcEEEECCcCHHHHHHHHHcCCCEEE
Confidence 555443 34678899864221111233467888776
No 445
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=38.72 E-value=1.5e+02 Score=30.55 Aligned_cols=97 Identities=18% Similarity=0.188 Sum_probs=56.0
Q ss_pred EEEeCCHHHHH-HHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEE----
Q 009523 219 TVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT---- 293 (532)
Q Consensus 219 ~i~~sSG~~Ai-~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~l---- 293 (532)
.|++++|..=| ..++..|++.|-.|++-+....+....+.. .-++....|..|-+.|.+.+.++++.+|+=
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----LQFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----ccCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 35666665222 344556778898777777766665543322 114555667778888999888766665543
Q ss_pred ----eCCCCCCCc----ccCHHHHHHHHHhCCCE
Q 009523 294 ----ESPTNPFLR----CVDVKLVSDLCHKKGAI 319 (532)
Q Consensus 294 ----esP~NptG~----v~dl~~I~~la~~~gi~ 319 (532)
|+..+|.-. +.---.|.+.++++|+.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 333333110 01112567777787764
No 446
>PLN02591 tryptophan synthase
Probab=38.38 E-value=2.3e+02 Score=28.25 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=56.7
Q ss_pred HHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEeC-C-CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-
Q 009523 229 STVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID-P-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV- 304 (532)
Q Consensus 229 i~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd-~-~dle~Le~al~~~~tklV~lesP~NptG~v~- 304 (532)
+...+..+.+.| |-||+++..+.....+ ...++.+|+...++- + .+.+.+++.... ....||+-+-...||.-.
T Consensus 95 ~~~F~~~~~~aGv~GviipDLP~ee~~~~-~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~-~~gFIY~Vs~~GvTG~~~~ 172 (250)
T PLN02591 95 IDKFMATIKEAGVHGLVVPDLPLEETEAL-RAEAAKNGIELVLLTTPTTPTERMKAIAEA-SEGFVYLVSSTGVTGARAS 172 (250)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHHHHHHH-HHHHHHcCCeEEEEeCCCCCHHHHHHHHHh-CCCcEEEeeCCCCcCCCcC
Confidence 333444444555 7899998877544433 355778888866542 3 345556665554 467788766666777643
Q ss_pred ---CHHHHHHHHHh-CCCEEEE
Q 009523 305 ---DVKLVSDLCHK-KGAIVCI 322 (532)
Q Consensus 305 ---dl~~I~~la~~-~gi~lIv 322 (532)
+++++.+.+++ .++++++
T Consensus 173 ~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 173 VSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred CchhHHHHHHHHHhcCCCceEE
Confidence 36665556665 4777776
No 447
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=38.10 E-value=1.4e+02 Score=32.93 Aligned_cols=111 Identities=16% Similarity=0.148 Sum_probs=65.3
Q ss_pred HHHHhccCCCEEEEcCCCCcchH---HHHHHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEEe-CCCC------CC
Q 009523 232 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 300 (532)
Q Consensus 232 al~all~~Gd~VIv~~~~y~~t~---~~~~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~le-sP~N------pt 300 (532)
.+.++++.|-.+|+-+..++.+. ..++.+-+.+ ++.+..-+..+.++.+.+++- ....|.+. .|.. .+
T Consensus 245 ~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~a-Gad~I~vg~g~Gs~~~t~~~~ 323 (495)
T PTZ00314 245 RAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDA-GADGLRIGMGSGSICITQEVC 323 (495)
T ss_pred HHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHc-CCCEEEECCcCCcccccchhc
Confidence 34556777766666566665333 2333333332 344443355678888888876 46777652 2221 01
Q ss_pred Cccc----CHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEE
Q 009523 301 LRCV----DVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 343 (532)
Q Consensus 301 G~v~----dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv 343 (532)
|.-. .+.++.++|+++|+++|.|.=..++. ..+.+.+|+|.|+
T Consensus 324 ~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm 371 (495)
T PTZ00314 324 AVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVM 371 (495)
T ss_pred cCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 1111 24567788889999999998755432 2466788999876
No 448
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=37.84 E-value=1.6e+02 Score=29.38 Aligned_cols=70 Identities=16% Similarity=0.222 Sum_probs=41.3
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC--CC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 311 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd--~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~ 311 (532)
++..+++..+.|. .+++.+|+++..+. .. ++.++.+.++++++++||.|.-.++ +.+..
T Consensus 169 ~~~~~v~~H~af~-------Y~~~~ygl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 234 (266)
T cd01018 169 KQRAFMVYHPAWG-------YFARDYGLTQIPIEEEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST-------KSAEA 234 (266)
T ss_pred CCCeEEEECchhH-------HHHHHcCCEEEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc-------HHHHH
Confidence 3556776544442 34667788766542 11 3566666677667888888643322 33446
Q ss_pred HHHhCCCEEEE
Q 009523 312 LCHKKGAIVCI 322 (532)
Q Consensus 312 la~~~gi~lIv 322 (532)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 77788876653
No 449
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.83 E-value=92 Score=25.90 Aligned_cols=62 Identities=15% Similarity=0.068 Sum_probs=39.7
Q ss_pred HHHHhcccCCcEEEEe--C-CCCH--HHHHHhhcCCCeeEEEEeCCCCCCCccc--CHHHHHHHHHhCCCEEEEEC
Q 009523 256 FIETVLPKMGITATVI--D-PADM--EGLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDG 324 (532)
Q Consensus 256 ~~~~~l~~~Gv~v~~v--d-~~dl--e~Le~al~~~~tklV~lesP~NptG~v~--dl~~I~~la~~~gi~lIvDe 324 (532)
.+...++.+|.+..+. + .... ..|+..+.. +.+|++- |+.+- -...+.+.|+++|++++.=.
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~--aD~VIv~-----t~~vsH~~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKK--ADLVIVF-----TDYVSHNAMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCC--CCEEEEE-----eCCcChHHHHHHHHHHHHcCCcEEEEC
Confidence 3556678889988887 2 2222 347877764 5666662 22222 25678889999999887533
No 450
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=37.12 E-value=2.4e+02 Score=28.50 Aligned_cols=79 Identities=14% Similarity=0.051 Sum_probs=35.5
Q ss_pred CEEEEcCCCCcchHHHHHHhcccCCcEEEEe-CCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009523 241 GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 314 (532)
Q Consensus 241 d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v-d~~-dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~ 314 (532)
|-+++++.-+.-... +...++++|+...++ .++ +.+.|++..+. ....||+-+-+..||.-.+ +.++.+..|
T Consensus 124 dGlivpDLP~ee~~~-~~~~~~~~gi~~I~lvaPtt~~~rl~~i~~~-a~GFiY~vs~~GvTG~~~~~~~~~~~~v~~vr 201 (265)
T COG0159 124 DGLLVPDLPPEESDE-LLKAAEKHGIDPIFLVAPTTPDERLKKIAEA-ASGFIYYVSRMGVTGARNPVSADVKELVKRVR 201 (265)
T ss_pred CEEEeCCCChHHHHH-HHHHHHHcCCcEEEEeCCCCCHHHHHHHHHh-CCCcEEEEecccccCCCcccchhHHHHHHHHH
Confidence 556666544433222 223445556655443 222 33444443332 2345555555555665544 344444444
Q ss_pred hC-CCEEE
Q 009523 315 KK-GAIVC 321 (532)
Q Consensus 315 ~~-gi~lI 321 (532)
++ +++++
T Consensus 202 ~~~~~Pv~ 209 (265)
T COG0159 202 KYTDVPVL 209 (265)
T ss_pred HhcCCCeE
Confidence 43 34443
No 451
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=36.65 E-value=1.1e+02 Score=30.66 Aligned_cols=93 Identities=16% Similarity=0.229 Sum_probs=50.6
Q ss_pred EEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCC
Q 009523 220 VIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 298 (532)
Q Consensus 220 i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~N 298 (532)
|++-+|+ +|..++=.-...+++.++++-..|+... +...+. ++..-..+.+.|.+.++++++++++ -.+.
T Consensus 5 ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l------~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llI--DATH 75 (257)
T COG2099 5 ILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAKL------AEQIGP-VRVGGFLGAEGLAAFLREEGIDLLI--DATH 75 (257)
T ss_pred EEEEeccHHHHHHHHHhhccCccEEEEEcccccccc------hhccCC-eeecCcCCHHHHHHHHHHcCCCEEE--ECCC
Confidence 4444565 6655443333345678888888887632 333333 3333445677777777766666554 2333
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEE
Q 009523 299 PFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 299 ptG~v~dl~~I~~la~~~gi~lIv 322 (532)
|.-.... +-..+.|++.|++.+.
T Consensus 76 PyAa~iS-~Na~~aake~gipy~r 98 (257)
T COG2099 76 PYAARIS-QNAARAAKETGIPYLR 98 (257)
T ss_pred hHHHHHH-HHHHHHHHHhCCcEEE
Confidence 4332222 2345667777776654
No 452
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=36.27 E-value=1.5e+02 Score=29.79 Aligned_cols=69 Identities=19% Similarity=0.326 Sum_probs=40.7
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHH
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 309 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I 309 (532)
++..+++..+.|. .+++.+|+++..+.. .++.++.+.++++++++||.|.-.|+ +.+
T Consensus 170 ~~~~~v~~H~af~-------Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 235 (282)
T cd01017 170 KGKTFVTQHAAFG-------YLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KIA 235 (282)
T ss_pred CCCeEEEecccHH-------HHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 3556776555443 345677887654321 14556666666667888888554432 344
Q ss_pred HHHHHhCCCEEE
Q 009523 310 SDLCHKKGAIVC 321 (532)
Q Consensus 310 ~~la~~~gi~lI 321 (532)
..++++.|+.++
T Consensus 236 ~~la~~~g~~v~ 247 (282)
T cd01017 236 ETLAKETGAKLL 247 (282)
T ss_pred HHHHHHcCCcEE
Confidence 456777776654
No 453
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=36.26 E-value=3e+02 Score=26.18 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=55.3
Q ss_pred HHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC----CCEEEEECCCCC
Q 009523 254 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK----GAIVCIDGTFAT 328 (532)
Q Consensus 254 ~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~----gi~lIvDet~a~ 328 (532)
..++..+++..|.++.+...+ .++++.+++.+.++.+|.+..-.. .....+.++.+..++. ++.+++=.....
T Consensus 99 ~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~ 176 (201)
T cd02070 99 KNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMT--TTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN 176 (201)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC
Confidence 344556788899999876543 578888887766788888844332 2345677777777764 466776443211
Q ss_pred CCcccccccCCcEEEECC
Q 009523 329 PLNQKALSLGADLVLHSA 346 (532)
Q Consensus 329 ~~~~~~l~~gaDivv~S~ 346 (532)
. .-....|+|.+..++
T Consensus 177 ~--~~~~~~GaD~~~~da 192 (201)
T cd02070 177 Q--EFADEIGADGYAEDA 192 (201)
T ss_pred H--HHHHHcCCcEEECCH
Confidence 1 112245777776543
No 454
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=36.19 E-value=4.5e+02 Score=26.43 Aligned_cols=68 Identities=15% Similarity=0.047 Sum_probs=38.7
Q ss_pred ccCCcEEEEeCCC--CHHHHHHhh----cCCCeeEEEEeC----CCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC
Q 009523 262 PKMGITATVIDPA--DMEGLEAAL----NNNNVSLFFTES----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 262 ~~~Gv~v~~vd~~--dle~Le~al----~~~~tklV~les----P~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~ 329 (532)
...|..|..-... +++++..+. ...+..+++++- .+|..-...|+..|..+-+..+.++++|-.+..+
T Consensus 131 a~~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 131 GKTKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred hcCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 3445544433321 444444333 223455666653 3334444557777777777779999999887654
No 455
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=36.18 E-value=1.6e+02 Score=31.66 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=62.2
Q ss_pred HHHHhccCCCEEEEcCCCCcchH---HHHHHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEEe-CCCC------CC
Q 009523 232 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 300 (532)
Q Consensus 232 al~all~~Gd~VIv~~~~y~~t~---~~~~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~le-sP~N------pt 300 (532)
-+..++..|-.||+-+..++... .+++.+-+.+ ++.+..-+..+.++.+.+++- ...+|.+- .|.. .+
T Consensus 157 ~v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~V~T~e~a~~l~~a-GaD~I~vG~g~Gs~c~tr~~~ 235 (404)
T PRK06843 157 RVEELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISV-GADCLKVGIGPGSICTTRIVA 235 (404)
T ss_pred HHHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEEEecCCHHHHHHHHHc-CCCEEEECCCCCcCCcceeec
Confidence 34456667755555455554322 2232222223 344444456678877777765 36666552 2211 12
Q ss_pred Ccc-c---CHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEE
Q 009523 301 LRC-V---DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 343 (532)
Q Consensus 301 G~v-~---dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv 343 (532)
|.- . .+..+.+++++.++++|.|.=...+ -..+.+.+|+|.|+
T Consensus 236 g~g~p~ltai~~v~~~~~~~~vpVIAdGGI~~~~Di~KALalGA~aVm 283 (404)
T PRK06843 236 GVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_pred CCCCChHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 221 1 2445677777889999999865443 23567788999876
No 456
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=36.12 E-value=1.3e+02 Score=27.07 Aligned_cols=60 Identities=12% Similarity=0.174 Sum_probs=40.7
Q ss_pred HHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC
Q 009523 255 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 316 (532)
Q Consensus 255 ~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~ 316 (532)
.++..+++..|.++.+.-.+ .++++.+++.+.++.+|.+..... .....++++.+.+++.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 44555678889999987654 467887777666789999844442 2334566777777665
No 457
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=36.06 E-value=2.9e+02 Score=27.87 Aligned_cols=43 Identities=23% Similarity=0.159 Sum_probs=29.8
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEEC
Q 009523 299 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 345 (532)
Q Consensus 299 ptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S 345 (532)
-+|....+-++++.++++|+.+|. -+.....|+..-+|+++..
T Consensus 186 ~sG~t~e~i~~a~~ak~~ga~vIa----iT~~~~spla~~Ad~~L~~ 228 (281)
T COG1737 186 FSGYTREIVEAAELAKERGAKVIA----ITDSADSPLAKLADIVLLV 228 (281)
T ss_pred CCCCcHHHHHHHHHHHHCCCcEEE----EcCCCCCchhhhhceEEec
Confidence 458888888999999999987774 2223345555557777644
No 458
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=36.04 E-value=1.7e+02 Score=32.99 Aligned_cols=94 Identities=18% Similarity=0.220 Sum_probs=56.0
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH---hcccCCcEEEEeCCC-C---HHHHHHhhcCCCeeEEEEe
Q 009523 222 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET---VLPKMGITATVIDPA-D---MEGLEAALNNNNVSLFFTE 294 (532)
Q Consensus 222 ~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~---~l~~~Gv~v~~vd~~-d---le~Le~al~~~~tklV~le 294 (532)
.|+|.=.+-.-+.+++.+|=.+|+++. ..+++. .+...|+.+..++.. + ...+...+.....+++|+
T Consensus 40 PTGgGKSlCyQiPAll~~G~TLVVSPL-----iSLM~DQV~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l~~g~~klLyi- 113 (590)
T COG0514 40 PTGGGKSLCYQIPALLLEGLTLVVSPL-----ISLMKDQVDQLEAAGIRAAYLNSTLSREERQQVLNQLKSGQLKLLYI- 113 (590)
T ss_pred cCCCCcchHhhhHHHhcCCCEEEECch-----HHHHHHHHHHHHHcCceeehhhcccCHHHHHHHHHHHhcCceeEEEE-
Confidence 344445566667788889988877642 333332 366789888877654 3 344555555556899999
Q ss_pred CCCCCCCcccCHHHHHHHH-HhCCCEEEEECCC
Q 009523 295 SPTNPFLRCVDVKLVSDLC-HKKGAIVCIDGTF 326 (532)
Q Consensus 295 sP~NptG~v~dl~~I~~la-~~~gi~lIvDet~ 326 (532)
+|- ....+ .+.+.. +-.=.++++||++
T Consensus 114 sPE---rl~~~--~f~~~L~~~~i~l~vIDEAH 141 (590)
T COG0514 114 SPE---RLMSP--RFLELLKRLPISLVAIDEAH 141 (590)
T ss_pred Cch---hhcCh--HHHHHHHhCCCceEEechHH
Confidence 443 11111 222222 3345689999994
No 459
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=36.04 E-value=2.7e+02 Score=27.36 Aligned_cols=81 Identities=14% Similarity=0.246 Sum_probs=45.4
Q ss_pred hcccCCcEEEE--eCCCCHHHHHHhhcCCCeeEEEEeCCCCC--CCccc-C-----HHHHHHHHHhCC--CEEEEECCCC
Q 009523 260 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCV-D-----VKLVSDLCHKKG--AIVCIDGTFA 327 (532)
Q Consensus 260 ~l~~~Gv~v~~--vd~~dle~Le~al~~~~tklV~lesP~Np--tG~v~-d-----l~~I~~la~~~g--i~lIvDet~a 327 (532)
..+..|+++-. -+.+.++.++..+.. +..|.+.+.+ | .|.-. + ++++.++..++| +.+-||.-..
T Consensus 103 ~Ik~~G~kaGlalnP~T~~~~l~~~l~~--vD~VLvMsV~-PGf~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~ 179 (229)
T PRK09722 103 EIRRAGMKVGLVLNPETPVESIKYYIHL--LDKITVMTVD-PGFAGQPFIPEMLDKIAELKALRERNGLEYLIEVDGSCN 179 (229)
T ss_pred HHHHcCCCEEEEeCCCCCHHHHHHHHHh--cCEEEEEEEc-CCCcchhccHHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 34555655433 245678888888864 5555555543 3 23322 2 344555555554 7789997533
Q ss_pred CCCcccccccCCcEEE
Q 009523 328 TPLNQKALSLGADLVL 343 (532)
Q Consensus 328 ~~~~~~~l~~gaDivv 343 (532)
..-.....+.|+|+++
T Consensus 180 ~~~i~~~~~aGad~~V 195 (229)
T PRK09722 180 QKTYEKLMEAGADVFI 195 (229)
T ss_pred HHHHHHHHHcCCCEEE
Confidence 2111234567999887
No 460
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=35.84 E-value=1.5e+02 Score=29.33 Aligned_cols=77 Identities=13% Similarity=0.106 Sum_probs=45.3
Q ss_pred HHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcC----CC-eeEEEEeCCCCCCCcccCHH
Q 009523 233 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NN-VSLFFTESPTNPFLRCVDVK 307 (532)
Q Consensus 233 l~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~----~~-tklV~lesP~NptG~v~dl~ 307 (532)
+..|++.|.+|.+....-.. ....++++...|..|.+.|.++++. .. ...|++..|..+ .......
T Consensus 16 v~~L~~~g~~V~~~~R~~~~--------~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~~~~~~ 86 (285)
T TIGR03649 16 ARLLQAASVPFLVASRSSSS--------SAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DLAPPMI 86 (285)
T ss_pred HHHHHhCCCcEEEEeCCCcc--------ccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-ChhHHHH
Confidence 34566677665543322111 1123566666788899999988841 13 567776666422 2233456
Q ss_pred HHHHHHHhCCC
Q 009523 308 LVSDLCHKKGA 318 (532)
Q Consensus 308 ~I~~la~~~gi 318 (532)
.+.+.|++.|+
T Consensus 87 ~~i~aa~~~gv 97 (285)
T TIGR03649 87 KFIDFARSKGV 97 (285)
T ss_pred HHHHHHHHcCC
Confidence 77888888886
No 461
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=35.76 E-value=4.3e+02 Score=26.78 Aligned_cols=104 Identities=22% Similarity=0.218 Sum_probs=54.8
Q ss_pred HhhhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCC
Q 009523 211 SALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN 286 (532)
Q Consensus 211 A~l~ga~~~i~~sSG~~Ai~~al~all~~Gd--~VIv~~--~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~ 286 (532)
+++....+.|++-+-+.....++....+.|. +|++.+ |.+.|.. + ...|...|++++.+...-...+ +.
T Consensus 104 ~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~-l-a~eL~~~GI~vtlI~Dsa~~~~---m~-- 176 (275)
T PRK08335 104 SELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLA-L-ANELEFLGIEFEVITDAQLGLF---AK-- 176 (275)
T ss_pred HHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHH-H-HHHHHHCCCCEEEEeccHHHHH---HH--
Confidence 4444444566665444333444444444554 555553 5454433 3 3446677999988753333322 32
Q ss_pred CeeEEEEe--CCCCCCCcccC-H--HHHHHHHHhCCCEEEE
Q 009523 287 NVSLFFTE--SPTNPFLRCVD-V--KLVSDLCHKKGAIVCI 322 (532)
Q Consensus 287 ~tklV~le--sP~NptG~v~d-l--~~I~~la~~~gi~lIv 322 (532)
++..|++- ... ..|.+.. + -.++-+|+.||++++|
T Consensus 177 ~vd~VivGAD~I~-~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 177 EATLALVGADNVT-RDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred hCCEEEECccEEe-cCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 24555551 111 2243332 2 3567778999999887
No 462
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=35.63 E-value=1e+02 Score=31.22 Aligned_cols=67 Identities=19% Similarity=0.367 Sum_probs=41.6
Q ss_pred CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHH
Q 009523 240 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 310 (532)
Q Consensus 240 Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~ 310 (532)
+..+++..+.|. .+++++|+++..+-. .++.++.+.++++++++||.|.-.++ +.+.
T Consensus 177 ~~~~v~~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~ 242 (287)
T cd01137 177 KRKLVTSEGAFS-------YFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMK 242 (287)
T ss_pred cCEEEEecccHH-------HHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHH
Confidence 456776555443 345677887654311 14566666777667999998554433 4456
Q ss_pred HHHHhCCCEE
Q 009523 311 DLCHKKGAIV 320 (532)
Q Consensus 311 ~la~~~gi~l 320 (532)
.++++.|+.+
T Consensus 243 ~ia~~~gv~v 252 (287)
T cd01137 243 QVAKETGAKI 252 (287)
T ss_pred HHHHHhCCcc
Confidence 7788888765
No 463
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=35.61 E-value=1.2e+02 Score=33.00 Aligned_cols=108 Identities=22% Similarity=0.193 Sum_probs=63.2
Q ss_pred HhccCCCEEEEcCCCCcchHHHH---HHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEEe-CCC--CCC----Ccc
Q 009523 235 ALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT--NPF----LRC 303 (532)
Q Consensus 235 all~~Gd~VIv~~~~y~~t~~~~---~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~le-sP~--Npt----G~v 303 (532)
.+...|-.+|.-+..|+.....+ +.+-+.+ .+.+..-+..+.++.+.+++. ....|-+. .|. ..| |.-
T Consensus 231 ~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~~~~vi~G~v~t~~~a~~l~~a-Gad~i~vg~g~G~~~~t~~~~~~g 309 (450)
T TIGR01302 231 ALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDA-GADGLRVGIGPGSICTTRIVAGVG 309 (450)
T ss_pred HHHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHh-CCCEEEECCCCCcCCccceecCCC
Confidence 55666755666566665433322 2222222 444444356678888888876 46777653 232 111 111
Q ss_pred c----CHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEE
Q 009523 304 V----DVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 343 (532)
Q Consensus 304 ~----dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv 343 (532)
. .+.++++.|+++++++|.|.=...+. ..+.+..|+|.++
T Consensus 310 ~p~~~~i~~~~~~~~~~~vpviadGGi~~~~di~kAla~GA~~V~ 354 (450)
T TIGR01302 310 VPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVM 354 (450)
T ss_pred ccHHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 1 24567777888999999998654432 3567788999876
No 464
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=35.47 E-value=3.7e+02 Score=26.69 Aligned_cols=42 Identities=24% Similarity=0.128 Sum_probs=26.5
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEE
Q 009523 299 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 344 (532)
Q Consensus 299 ptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~ 344 (532)
..|...++.++++.|+++|+.+|+ -+.....++...+|+++.
T Consensus 184 ~sg~~~~~~~~~~~ak~~ga~iI~----IT~~~~s~la~~ad~~l~ 225 (278)
T PRK11557 184 YSGERRELNLAADEALRVGAKVLA----ITGFTPNALQQRASHCLY 225 (278)
T ss_pred CCCCCHHHHHHHHHHHHcCCCEEE----EcCCCCCchHHhCCEEEE
Confidence 457777788899999999876553 122223344445777764
No 465
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=35.40 E-value=3e+02 Score=27.07 Aligned_cols=91 Identities=4% Similarity=-0.103 Sum_probs=46.7
Q ss_pred HHHhccCC-CEEEEcCCCCc--chHHHHHHhcccCCcEEEEe-C-CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC--
Q 009523 233 LLALVPAG-GHIVTTTDCYR--KTRIFIETVLPKMGITATVI-D-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-- 305 (532)
Q Consensus 233 l~all~~G-d~VIv~~~~y~--~t~~~~~~~l~~~Gv~v~~v-d-~~dle~Le~al~~~~tklV~lesP~NptG~v~d-- 305 (532)
+..+...| |.|++.+..+. ....-+...++..|+++... . ..+.+.++..++. -..++|+ +.++.+|...+
T Consensus 94 i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~-~~~~l~m-sv~~~~g~~~~~~ 171 (244)
T PRK13125 94 LNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKL-SPLFIYY-GLRPATGVPLPVS 171 (244)
T ss_pred HHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHh-CCCEEEE-EeCCCCCCCchHH
Confidence 33344444 67777653331 11112224567778876543 3 3457788887765 2445555 66666675432
Q ss_pred HHHHHHHHHhC--CCEEEEECC
Q 009523 306 VKLVSDLCHKK--GAIVCIDGT 325 (532)
Q Consensus 306 l~~I~~la~~~--gi~lIvDet 325 (532)
+.+..+.+++. +..+++|.=
T Consensus 172 ~~~~i~~lr~~~~~~~i~v~gG 193 (244)
T PRK13125 172 VERNIKRVRNLVGNKYLVVGFG 193 (244)
T ss_pred HHHHHHHHHHhcCCCCEEEeCC
Confidence 22222333332 356777743
No 466
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=35.35 E-value=2.1e+02 Score=30.58 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=43.9
Q ss_pred cCCCEEEEcCCCCcchH-----HHHHHhcccCCcEEEE-eC---CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHH
Q 009523 238 PAGGHIVTTTDCYRKTR-----IFIETVLPKMGITATV-ID---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 308 (532)
Q Consensus 238 ~~Gd~VIv~~~~y~~t~-----~~~~~~l~~~Gv~v~~-vd---~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~ 308 (532)
++||.|+.+.+..++.. ..++..+.+.|+++.. +. ..+.++|...++--+++.++. .+ |.-..+..
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ip--vH---ge~~~~~~ 391 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIP--VH---GEYRMLIN 391 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEe--cC---CcHHHHHH
Confidence 47899999887777754 1122134556776643 21 224556655554223454442 23 66556777
Q ss_pred HHHHHHhCCC
Q 009523 309 VSDLCHKKGA 318 (532)
Q Consensus 309 I~~la~~~gi 318 (532)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 8888887764
No 467
>PRK13937 phosphoheptose isomerase; Provisional
Probab=35.31 E-value=3.6e+02 Score=25.30 Aligned_cols=41 Identities=12% Similarity=-0.056 Sum_probs=26.6
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEE
Q 009523 299 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 343 (532)
Q Consensus 299 ptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv 343 (532)
.+|...++-++++.|+++|+.+|. -+.....++..-+|+++
T Consensus 115 ~sG~t~~~~~~~~~ak~~g~~~I~----iT~~~~s~L~~~ad~~l 155 (188)
T PRK13937 115 TSGNSPNVLAALEKARELGMKTIG----LTGRDGGKMKELCDHLL 155 (188)
T ss_pred CCCCcHHHHHHHHHHHHCCCeEEE----EeCCCCChhHHhCCEEE
Confidence 347777888999999999987764 12222344444456655
No 468
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=35.08 E-value=1.8e+02 Score=30.50 Aligned_cols=93 Identities=18% Similarity=0.214 Sum_probs=50.0
Q ss_pred EEeCCHHHHHHHHHHHhccCCC--EEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC
Q 009523 220 VIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 297 (532)
Q Consensus 220 i~~sSG~~Ai~~al~all~~Gd--~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~ 297 (532)
+++.+|.-+- .++..|.+.++ +|++.+..-........ .+....++...+|..|.++|++.+++ .++|+-+.|.
T Consensus 2 lvlG~G~vG~-~~~~~L~~~~~~~~v~va~r~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~--~dvVin~~gp 77 (386)
T PF03435_consen 2 LVLGAGRVGS-AIARLLARRGPFEEVTVADRNPEKAERLAE-KLLGDRVEAVQVDVNDPESLAELLRG--CDVVINCAGP 77 (386)
T ss_dssp EEE--SHHHH-HHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTT--SSEEEE-SSG
T ss_pred EEEcCcHHHH-HHHHHHhcCCCCCcEEEEECCHHHHHHHHh-hccccceeEEEEecCCHHHHHHHHhc--CCEEEECCcc
Confidence 4555555332 22344555443 66665544332221111 11334677788899999999999986 4677654443
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEEEE
Q 009523 298 NPFLRCVDVKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 298 NptG~v~dl~~I~~la~~~gi~lIvD 323 (532)
. .-..+++.|-++|+. .+|
T Consensus 78 ~------~~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 78 F------FGEPVARACIEAGVH-YVD 96 (386)
T ss_dssp G------GHHHHHHHHHHHT-E-EEE
T ss_pred c------hhHHHHHHHHHhCCC-eec
Confidence 2 345788889888886 456
No 469
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=35.02 E-value=99 Score=26.01 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=31.6
Q ss_pred EEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 268 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 268 v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
+..+..+..+.+..++.. ..++++++ |...+-+++.++|++.+++++.
T Consensus 43 lvIt~gdR~di~~~a~~~-~i~~iIlt------g~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 43 LVITPGDREDIQLAAIEA-GIACIILT------GGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEETT-HHHHHHHCCT-TECEEEEE------TT----HHHHHHHHHHT-EEEE
T ss_pred EEEEeCCcHHHHHHHHHh-CCCEEEEe------CCCCCCHHHHHHHHHCCCEEEE
Confidence 334445667777778876 58888883 4556678999999999988875
No 470
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=34.58 E-value=2.2e+02 Score=26.91 Aligned_cols=43 Identities=14% Similarity=0.005 Sum_probs=28.6
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEEC
Q 009523 299 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 345 (532)
Q Consensus 299 ptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S 345 (532)
.+|...++-++++.|+++|+.+|.= +.....++..-+|+++..
T Consensus 120 ~SG~t~~~i~~~~~ak~~g~~iI~i----T~~~~s~l~~~ad~~l~~ 162 (192)
T PRK00414 120 TSGNSGNIIKAIEAARAKGMKVITL----TGKDGGKMAGLADIEIRV 162 (192)
T ss_pred CCCCCHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEEe
Confidence 4577788889999999999888751 222334444446766643
No 471
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=33.37 E-value=63 Score=30.31 Aligned_cols=80 Identities=16% Similarity=0.255 Sum_probs=51.2
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC--CEEEEECCCCCCCcccccccCCcEEEECCccccCC
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGG 352 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g--i~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg 352 (532)
|..+++++++. +...+++ -+|.+.+++++.+++++.| +++++|=+.+-. ..+.+++++. +...+
T Consensus 12 ~~~~le~~les-~~~~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~----~~e~~i~fi~----~~~~p 77 (181)
T COG1954 12 DNKDLEKALES-ESQYVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS----NDEVAIEFIK----EVIKP 77 (181)
T ss_pred hHHHHHHHhcC-CCeEEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcccC----CchHHHHHHH----HhccC
Confidence 67889999987 5777776 3688999999999999876 566677554322 1122233332 22222
Q ss_pred CCCcEEEEEEeChHHHHHHHH
Q 009523 353 HNDVLAGSISGSGKLVTQIRN 373 (532)
Q Consensus 353 ~gd~~gG~lv~~~~li~~l~~ 373 (532)
-|.+..+...+...++
T Consensus 78 -----dGIISTk~~~i~~Akk 93 (181)
T COG1954 78 -----DGIISTKSNVIKKAKK 93 (181)
T ss_pred -----CeeEEccHHHHHHHHH
Confidence 3677777766665544
No 472
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=33.04 E-value=1.3e+02 Score=26.74 Aligned_cols=62 Identities=13% Similarity=0.178 Sum_probs=41.7
Q ss_pred HHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009523 254 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 317 (532)
Q Consensus 254 ~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g 317 (532)
.+.+...++..|.+|...-.+ .++.+.++..+++..+|.+.+-. +.....++++.+.+++.|
T Consensus 16 kniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~g 78 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAG 78 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCC
Confidence 345556788889999876543 46666665555578888884444 344456788888888765
No 473
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=32.73 E-value=1.3e+02 Score=26.96 Aligned_cols=62 Identities=13% Similarity=0.158 Sum_probs=42.8
Q ss_pred HHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009523 254 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 317 (532)
Q Consensus 254 ~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g 317 (532)
.+.+...++..|.+|...-.+ .++++.++..++++.+|-+.+-. +.....++++.+.+++.|
T Consensus 18 k~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~g 80 (134)
T TIGR01501 18 NKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAG 80 (134)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCC
Confidence 345556788899999876543 56777666655578888885544 334446788888888765
No 474
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=32.59 E-value=3.9e+02 Score=28.93 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=52.5
Q ss_pred HhccCCCEE-EEcCCCCc-chHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcC----CCeeEEEEeCCCCCCCcccCHHH
Q 009523 235 ALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKL 308 (532)
Q Consensus 235 all~~Gd~V-Iv~~~~y~-~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~----~~tklV~lesP~NptG~v~dl~~ 308 (532)
.+...|-.| ++....|. +....+.......|+.+... .+++++.+++.. .+..+|++.++....-....+++
T Consensus 264 ~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~--~d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~E 341 (436)
T PRK11889 264 QFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV--RDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEE 341 (436)
T ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec--CCHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHH
Confidence 344556443 45555664 34444555566678776543 366677666632 13589999988743322233555
Q ss_pred HHHHHHh---CCCEEEEECCCC
Q 009523 309 VSDLCHK---KGAIVCIDGTFA 327 (532)
Q Consensus 309 I~~la~~---~gi~lIvDet~a 327 (532)
+.++.+. +.+++++|.+..
T Consensus 342 L~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 342 MIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred HHHHHhhcCCCeEEEEECCccC
Confidence 6555543 567888988743
No 475
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=32.45 E-value=2.9e+02 Score=27.24 Aligned_cols=93 Identities=11% Similarity=0.073 Sum_probs=51.6
Q ss_pred HHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE-eCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc---
Q 009523 231 VMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV--- 304 (532)
Q Consensus 231 ~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~-vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~--- 304 (532)
..+..+.+.| |-|++++..+.. ..-+...++..|++... +.+ ...+.++..++. ....|++.+.+..||.-.
T Consensus 95 ~fi~~~~~aG~~giiipDl~~ee-~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~-~~~~vy~~s~~g~tG~~~~~~ 172 (242)
T cd04724 95 RFLRDAKEAGVDGLIIPDLPPEE-AEEFREAAKEYGLDLIFLVAPTTPDERIKKIAEL-ASGFIYYVSRTGVTGARTELP 172 (242)
T ss_pred HHHHHHHHCCCcEEEECCCCHHH-HHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhh-CCCCEEEEeCCCCCCCccCCC
Confidence 3344454555 567776654432 22233456778886654 443 456777777763 356677766655565432
Q ss_pred -CH-HHHHHHHHhCCCEEEEECC
Q 009523 305 -DV-KLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 305 -dl-~~I~~la~~~gi~lIvDet 325 (532)
++ +.|.++.+..++++++|.=
T Consensus 173 ~~~~~~i~~lr~~~~~pI~vggG 195 (242)
T cd04724 173 DDLKELIKRIRKYTDLPIAVGFG 195 (242)
T ss_pred hhHHHHHHHHHhcCCCcEEEEcc
Confidence 23 3344444434788888743
No 476
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=32.42 E-value=1.8e+02 Score=29.61 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=34.5
Q ss_pred eCCCCHHHHHHhhcCCCeeEEEEeCCC-CCCCcccC-----------HHHHHHHHHhCCCEEEE
Q 009523 271 IDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD-----------VKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 271 vd~~dle~Le~al~~~~tklV~lesP~-NptG~v~d-----------l~~I~~la~~~gi~lIv 322 (532)
+|..|.+.+.+.+++.++.+|+-+... +....-.+ ...|+++|++.|+++|-
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 466688889888877567777765443 22222222 24689999999987753
No 477
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=31.35 E-value=1.6e+02 Score=27.60 Aligned_cols=59 Identities=20% Similarity=0.129 Sum_probs=31.0
Q ss_pred cccCCcEEEEeCCCC----------HHHHHHhh----cCCC-eeEEEEeCCCCCCCcccC--HHHHHHHHHhCCCEEEE
Q 009523 261 LPKMGITATVIDPAD----------MEGLEAAL----NNNN-VSLFFTESPTNPFLRCVD--VKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 261 l~~~Gv~v~~vd~~d----------le~Le~al----~~~~-tklV~lesP~NptG~v~d--l~~I~~la~~~gi~lIv 322 (532)
++..|++...+|.++ .+++++.+ +... -+++++ +|-.|...| -++...+.+..|+.++.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~Iv---SNsaGs~~d~~~~~a~~~~~~lgIpvl~ 111 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIV---SNSAGSSDDPDGERAEALEKALGIPVLR 111 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEE---ECCCCcccCccHHHHHHHHHhhCCcEEE
Confidence 677788888777542 12222222 1111 135554 455565544 45566666667776553
No 478
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=31.35 E-value=2.3e+02 Score=30.75 Aligned_cols=99 Identities=12% Similarity=0.173 Sum_probs=55.7
Q ss_pred HHHHHHHHhccCCCEE-EEcCCCCcch-HHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC
Q 009523 228 ASTVMLLALVPAGGHI-VTTTDCYRKT-RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 305 (532)
Q Consensus 228 Ai~~al~all~~Gd~V-Iv~~~~y~~t-~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d 305 (532)
+..++.......|..| ++....|... ...+.......|+.+.. ..++..+.+.+...+...|++.++..+.-....
T Consensus 240 aaKLA~~~~~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd~~~ 317 (432)
T PRK12724 240 IAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRNLEQ 317 (432)
T ss_pred HHHHHHHHHHhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccCHHH
Confidence 3333333334566555 4444555442 33333445556765432 234555555554335788999987755444455
Q ss_pred HHHHHHHHHh------CCCEEEEECCCCC
Q 009523 306 VKLVSDLCHK------KGAIVCIDGTFAT 328 (532)
Q Consensus 306 l~~I~~la~~------~gi~lIvDet~a~ 328 (532)
++++.++.+. ...++|+|.+...
T Consensus 318 l~eL~~~~~~~~~~~~~e~~LVLsAt~~~ 346 (432)
T PRK12724 318 LERMQSFYSCFGEKDSVENLLVLSSTSSY 346 (432)
T ss_pred HHHHHHHHHhhcCCCCCeEEEEEeCCCCH
Confidence 6677766653 3578999988653
No 479
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=31.19 E-value=5.1e+02 Score=25.36 Aligned_cols=128 Identities=19% Similarity=0.316 Sum_probs=65.3
Q ss_pred HHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE--eCCCCHHHHHHhhcCCCeeEEEEeCCCCC--CCcc-c
Q 009523 231 VMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRC-V 304 (532)
Q Consensus 231 ~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~--vd~~dle~Le~al~~~~tklV~lesP~Np--tG~v-~ 304 (532)
..+..+++.| |.|-+..-......+.+ +..+..|++.-. -+.+.++.++..+.. ..+|.+.+.+ | .|.- .
T Consensus 75 ~~i~~fa~agad~It~H~E~~~~~~r~i-~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~--vD~VllMsVn-PGfgGQ~Fi 150 (220)
T COG0036 75 RYIEAFAKAGADIITFHAEATEHIHRTI-QLIKELGVKAGLVLNPATPLEALEPVLDD--VDLVLLMSVN-PGFGGQKFI 150 (220)
T ss_pred HHHHHHHHhCCCEEEEEeccCcCHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHhh--CCEEEEEeEC-CCCcccccC
Confidence 3445566667 43333222121222333 334555665433 355678888888865 6777776665 4 2322 2
Q ss_pred C-----HHHHHHHHHhC-CCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh
Q 009523 305 D-----VKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH 375 (532)
Q Consensus 305 d-----l~~I~~la~~~-gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~ 375 (532)
| ++++.++..+. ++.+-||.-....-.....+.|+|+++ .|-++.+.+++.+.++.++
T Consensus 151 ~~~l~Ki~~lr~~~~~~~~~~IeVDGGI~~~t~~~~~~AGad~~V-------------aGSalF~~~d~~~~i~~~~ 214 (220)
T COG0036 151 PEVLEKIRELRAMIDERLDILIEVDGGINLETIKQLAAAGADVFV-------------AGSALFGADDYKATIRELR 214 (220)
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEeCCcCHHHHHHHHHcCCCEEE-------------EEEEEeCCccHHHHHHHHH
Confidence 2 34444444432 567778864321111223357999887 1334555555555555443
No 480
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=31.19 E-value=1e+02 Score=30.82 Aligned_cols=84 Identities=14% Similarity=0.246 Sum_probs=49.6
Q ss_pred cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC--CCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccCHHHHHHHH
Q 009523 238 PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLC 313 (532)
Q Consensus 238 ~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd--~~dle~Le~al~~--~~tklV~lesP~NptG~v~dl~~I~~la 313 (532)
--||+|+.-+.. ..+..++.+.+...|+++..+. ++|+++|.++++. .+..+|++..--.|| .|-----.+|
T Consensus 8 ~vG~ElL~G~iv-dtNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tGGLGPT---~DDiT~e~vA 83 (255)
T COG1058 8 AVGDELLSGRIV-DTNAAFLADELTELGVDLARITTVGDNPDRIVEALREASERADVVITTGGLGPT---HDDLTAEAVA 83 (255)
T ss_pred EEccceecCcee-cchHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECCCcCCC---ccHhHHHHHH
Confidence 347777654432 2344566677888899887654 5677777766642 147888883333343 3311122345
Q ss_pred HhCCCEEEEECC
Q 009523 314 HKKGAIVCIDGT 325 (532)
Q Consensus 314 ~~~gi~lIvDet 325 (532)
+..|..++.|+-
T Consensus 84 ka~g~~lv~~~~ 95 (255)
T COG1058 84 KALGRPLVLDEE 95 (255)
T ss_pred HHhCCCcccCHH
Confidence 556778888865
No 481
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=31.15 E-value=3e+02 Score=29.41 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=63.0
Q ss_pred cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCC
Q 009523 218 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP 296 (532)
.+++..+|.-+-.. +..+.+.| ..|.+.+.+-....+.... ..-.++...+|..|.+++.++|++ ..+|+-.-|
T Consensus 3 ~ilviGaG~Vg~~v-a~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~--~d~VIn~~p 77 (389)
T COG1748 3 KILVIGAGGVGSVV-AHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKD--FDLVINAAP 77 (389)
T ss_pred cEEEECCchhHHHH-HHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhc--CCEEEEeCC
Confidence 46778887744333 33444555 4565555443332221111 112577888899999999999987 377777666
Q ss_pred CCCCCccc------------------CHHHHHHHHHhCCCEEEEECCCCCC
Q 009523 297 TNPFLRCV------------------DVKLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 297 ~NptG~v~------------------dl~~I~~la~~~gi~lIvDet~a~~ 329 (532)
..-+..+. +..++.+.|++.|+..|.+.=+..+
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPG 128 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPG 128 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcc
Confidence 54333221 1245666777778777777655544
No 482
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=31.00 E-value=1.8e+02 Score=29.02 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=25.2
Q ss_pred CCCeeEEEEeCCCCCC-----C--ccc----C----HHHHHHHHHhCCCEEEEEC
Q 009523 285 NNNVSLFFTESPTNPF-----L--RCV----D----VKLVSDLCHKKGAIVCIDG 324 (532)
Q Consensus 285 ~~~tklV~lesP~Npt-----G--~v~----d----l~~I~~la~~~gi~lIvDe 324 (532)
++++++|++.+...+. | ... . ...|..+|++|++.+++=|
T Consensus 131 ~~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTN 185 (256)
T PF08423_consen 131 ESKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTN 185 (256)
T ss_dssp HSCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeec
Confidence 3479999999987542 1 111 1 2247778889998766543
No 483
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=30.71 E-value=3e+02 Score=26.33 Aligned_cols=41 Identities=10% Similarity=0.001 Sum_probs=28.2
Q ss_pred HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 277 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
.+++...+++ --+|++ + .+|...++-+++++|+++|+.+|.
T Consensus 101 ~ql~~~~~~g-Dvli~i-S---~SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAG-DVLLAI-S---TRGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCC-CEEEEE-e---CCCCCHHHHHHHHHHHHCCCEEEE
Confidence 4555556553 233444 2 357777889999999999999886
No 484
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=30.65 E-value=3.1e+02 Score=27.52 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=51.5
Q ss_pred cCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEe-CC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHH
Q 009523 238 PAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVS 310 (532)
Q Consensus 238 ~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v-d~-~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~ 310 (532)
..| |-+|+++..+..... +...+...|+....+ .+ ...+.+++..+. ....||+-+-...||.-.+ +++..
T Consensus 113 ~aGvdGlIipDLP~ee~~~-~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~-a~gFiY~vs~~GvTG~~~~~~~~l~~~i 190 (259)
T PF00290_consen 113 EAGVDGLIIPDLPPEESEE-LREAAKKHGLDLIPLVAPTTPEERIKKIAKQ-ASGFIYLVSRMGVTGSRTELPDELKEFI 190 (259)
T ss_dssp HHTEEEEEETTSBGGGHHH-HHHHHHHTT-EEEEEEETTS-HHHHHHHHHH--SSEEEEESSSSSSSTTSSCHHHHHHHH
T ss_pred HcCCCEEEEcCCChHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHh-CCcEEEeeccCCCCCCcccchHHHHHHH
Confidence 334 778999877765443 335677788876653 33 456666665554 3678888787888888653 45555
Q ss_pred HHHHhC-CCEEEE
Q 009523 311 DLCHKK-GAIVCI 322 (532)
Q Consensus 311 ~la~~~-gi~lIv 322 (532)
+..+++ +.++++
T Consensus 191 ~~ik~~~~~Pv~v 203 (259)
T PF00290_consen 191 KRIKKHTDLPVAV 203 (259)
T ss_dssp HHHHHTTSS-EEE
T ss_pred HHHHhhcCcceEE
Confidence 555654 577765
No 485
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=30.59 E-value=2.6e+02 Score=30.78 Aligned_cols=112 Identities=18% Similarity=0.137 Sum_probs=63.9
Q ss_pred HHHHHhccCCCEEEEcCCCCcchHHH---HHHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEE-------eCCCCC
Q 009523 231 VMLLALVPAGGHIVTTTDCYRKTRIF---IETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-------ESPTNP 299 (532)
Q Consensus 231 ~al~all~~Gd~VIv~~~~y~~t~~~---~~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~l-------esP~Np 299 (532)
..+..++..|-.+|+-+..|+..... ++..-+.+ ++.+.--+..+.++-+.+++. ...+|-+ |+-...
T Consensus 230 ~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~a-Gad~v~vgig~gsictt~~~ 308 (479)
T PRK07807 230 AKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEA-GADIVKVGVGPGAMCTTRMM 308 (479)
T ss_pred HHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHc-CCCEEEECccCCcccccccc
Confidence 44456667776667767777653332 32222233 445443366678877777765 2444431 233334
Q ss_pred CCcccC-HHHHHHH---HHhCCCEEEEECCCCCC-CcccccccCCcEEE
Q 009523 300 FLRCVD-VKLVSDL---CHKKGAIVCIDGTFATP-LNQKALSLGADLVL 343 (532)
Q Consensus 300 tG~v~d-l~~I~~l---a~~~gi~lIvDet~a~~-~~~~~l~~gaDivv 343 (532)
||.-.| +..|.++ |+++++++|.|.-...+ -..+.+..|+|.++
T Consensus 309 ~~~~~p~~~av~~~~~~~~~~~~~via~ggi~~~~~~~~al~~ga~~v~ 357 (479)
T PRK07807 309 TGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVM 357 (479)
T ss_pred cCCchhHHHHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHcCCCeee
Confidence 453333 5554444 55889999999875443 23456778888776
No 486
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=30.52 E-value=1.9e+02 Score=28.00 Aligned_cols=87 Identities=15% Similarity=0.118 Sum_probs=45.3
Q ss_pred HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh---CCCEE--EEECCCCCCCcccccccCCcEEEECCccccC
Q 009523 277 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIV--CIDGTFATPLNQKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~---~gi~l--IvDet~a~~~~~~~l~~gaDivv~S~sK~lg 351 (532)
+.|+++-++.+++.|++. .+.|.|...++++|.+..++ .+.++ ++|.+.+..+. +...+|.++.+-+-.+|
T Consensus 36 ~~l~~a~~d~~ik~vvL~-~~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy~---lasaad~I~a~p~~~vg 111 (222)
T cd07018 36 EALEKAAEDDRIKGIVLD-LDGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQYY---LASAADEIYLNPSGSVE 111 (222)
T ss_pred HHHHHHhcCCCeEEEEEE-CCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhhh---hhhhCCEEEECCCceEE
Confidence 344444444468999994 46688888888877765532 34444 34432222221 23346666544433333
Q ss_pred CCCCcEEEEEEeChHHHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQIR 372 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~ 372 (532)
..|++.....+-+.+.
T Consensus 112 -----~iGv~~~~~~~~~ll~ 127 (222)
T cd07018 112 -----LTGLSAETLFFKGLLD 127 (222)
T ss_pred -----eeccchhhhhHHHHHH
Confidence 2455554443333333
No 487
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=30.23 E-value=2.9e+02 Score=29.71 Aligned_cols=76 Identities=20% Similarity=0.231 Sum_probs=41.1
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCC
Q 009523 219 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 298 (532)
Q Consensus 219 ~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~N 298 (532)
++++..|-.++.+ ...+.+.|-.|.+.+.............+...|+++..-...+++.++..+.+ ..+|++ +|.-
T Consensus 3 v~viG~G~sG~s~-a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~--~d~vv~-s~gi 78 (459)
T PRK02705 3 AHVIGLGRSGIAA-ARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQ--PDLVVV-SPGI 78 (459)
T ss_pred EEEEccCHHHHHH-HHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhc--CCEEEE-CCCC
Confidence 4666666666654 55566778888777754332221111234556887754333344444444543 456666 5553
No 488
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=30.19 E-value=45 Score=37.73 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=33.9
Q ss_pred CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 287 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 287 ~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
++...| .|++..|...+++++++-||++||-||+|-+++
T Consensus 199 q~~g~y--Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 199 QGTGYY--APTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred Ccceec--cccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 344444 799999999999999999999999999999954
No 489
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=29.97 E-value=1.9e+02 Score=24.67 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=44.9
Q ss_pred HHHHhcccCCcE-EEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC
Q 009523 256 FIETVLPKMGIT-ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 256 ~~~~~l~~~Gv~-v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet 325 (532)
.++.+.+.+|+. +..+.+.--|+-+-+|+. -+-.|++..+.| .+++-|..||++.|+++.++.-
T Consensus 24 ~v~~i~~~~gI~diN~IKPGIgEaTRvLLRR-vP~~vLVr~~~~-----pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 24 EVERIAERYGISDINLIKPGIGEATRVLLRR-VPWKVLVRDPDD-----PDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHhCCCCcccccCChhHHHHHHHhc-CCCEEEECCCCC-----ccHHHHHHHHHHcCCcEEEeCC
Confidence 344556677764 334444445666667766 467788877776 4789999999999999988653
No 490
>PLN02672 methionine S-methyltransferase
Probab=29.96 E-value=2.8e+02 Score=33.78 Aligned_cols=117 Identities=11% Similarity=0.063 Sum_probs=67.3
Q ss_pred hHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHh------ccCCCEEEEcCCCCcchHHHHHHh-------
Q 009523 202 TTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLAL------VPAGGHIVTTTDCYRKTRIFIETV------- 260 (532)
Q Consensus 202 ~~~~Le~~lA~l~g--------a~~~i~~sSG~~Ai~~al~al------l~~Gd~VIv~~~~y~~t~~~~~~~------- 260 (532)
....+|+.+|.+++ .++++++.|-..||..+++-+ +..+.. .... ..++..+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~ 499 (1082)
T PLN02672 427 GSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLT----RWLP---KKWLTSLAIENATS 499 (1082)
T ss_pred cchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhh----ccCC---HHHHhHhhhhcccc
Confidence 34568888888764 257899999999998887633 222211 1111 1112111
Q ss_pred cccCCcEEEEeCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC
Q 009523 261 LPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 261 l~~~Gv~v~~vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet 325 (532)
....+..++.+.. ..-+.+.++++.-++++|++....-..-+..-++.|.+.+++.|+.++.|..
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 500 DSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred cCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 1122234444432 1223455556555678888744442222223477888899999999999987
No 491
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=29.60 E-value=99 Score=27.71 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=39.8
Q ss_pred CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH----HHHHH-HHHhC-CCEE-EEECCCCC
Q 009523 274 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV----KLVSD-LCHKK-GAIV-CIDGTFAT 328 (532)
Q Consensus 274 ~dle~Le~al~~~~tklV~lesP~NptG~v~dl----~~I~~-la~~~-gi~l-IvDet~a~ 328 (532)
.+.+.|.+.++++++..|++-.|.|..|...+. .+.++ +.+++ ++++ .+||-+.+
T Consensus 38 ~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 38 KDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred hHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 478999999988789999999999988888762 23333 33444 7765 48998765
No 492
>cd00150 PlantTI Plant trypsin inhibitors such as squash trypsin inhibitor. Plant proteinase inhibitors play important roles in natural plant defense. Proteinase inhibitors from squash seeds form an uniform family of small proteins cross-linked with three disulfide bridges.
Probab=29.57 E-value=24 Score=22.35 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=12.3
Q ss_pred ccccccccCCCCcccccCCCCCC
Q 009523 8 SQKILSFSSSCSSFECRSDPDFS 30 (532)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (532)
|||++ .+|..|.|-.
T Consensus 1 CPrIl--------m~Ck~DsDCl 15 (27)
T cd00150 1 CPRIL--------MECKRDSDCL 15 (27)
T ss_pred Ccchh--------eecccccccc
Confidence 78988 8999988853
No 493
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=29.43 E-value=6.5e+02 Score=25.96 Aligned_cols=89 Identities=12% Similarity=0.262 Sum_probs=47.5
Q ss_pred cCCCEE-EEcCCCCcc-hHHHHHHhcccCCcEEEEeC-CCCH-----HHHHHhhcCCCeeEEEEeCCCCCCCc---ccCH
Q 009523 238 PAGGHI-VTTTDCYRK-TRIFIETVLPKMGITATVID-PADM-----EGLEAALNNNNVSLFFTESPTNPFLR---CVDV 306 (532)
Q Consensus 238 ~~Gd~V-Iv~~~~y~~-t~~~~~~~l~~~Gv~v~~vd-~~dl-----e~Le~al~~~~tklV~lesP~NptG~---v~dl 306 (532)
..|.+| ++..+.|.. ....+.....+.++.+...+ ..|+ +.++.+..+ +..+|++.+|....-. +..+
T Consensus 140 ~~g~~V~Li~~D~~r~~a~eql~~~a~~~~i~~~~~~~~~dpa~~v~~~l~~~~~~-~~D~ViIDTaGr~~~~~~l~~eL 218 (318)
T PRK10416 140 AQGKKVLLAAGDTFRAAAIEQLQVWGERVGVPVIAQKEGADPASVAFDAIQAAKAR-GIDVLIIDTAGRLHNKTNLMEEL 218 (318)
T ss_pred hcCCeEEEEecCccchhhHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCCCCCcCCHHHHHHH
Confidence 445444 444555643 22223233455677665443 2243 344444444 5789999998732211 2235
Q ss_pred HHHHHHHH------hCCCEEEEECCCC
Q 009523 307 KLVSDLCH------KKGAIVCIDGTFA 327 (532)
Q Consensus 307 ~~I~~la~------~~gi~lIvDet~a 327 (532)
+++.++++ .+++++|+|.+.+
T Consensus 219 ~~~~~v~~~~~~~~p~~~~LVl~a~~g 245 (318)
T PRK10416 219 KKIKRVIKKADPDAPHEVLLVLDATTG 245 (318)
T ss_pred HHHHHHHhhhcCCCCceEEEEEECCCC
Confidence 55555553 3467899999853
No 494
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=29.34 E-value=1.3e+02 Score=31.40 Aligned_cols=68 Identities=19% Similarity=0.160 Sum_probs=42.3
Q ss_pred EEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchHHHHH---Hh-cccCCcEEEEeCCCCHHHHHHhhcCCC
Q 009523 219 TVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIE---TV-LPKMGITATVIDPADMEGLEAALNNNN 287 (532)
Q Consensus 219 ~i~~sSG~--~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~---~~-l~~~Gv~v~~vd~~dle~Le~al~~~~ 287 (532)
.+++++|. -+- .+...|++.|+.|++-+.-.......+. .. .+..++.+...|..|.+.|++..+..+
T Consensus 4 ~VLVtGgaGyiGs-ht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~ 77 (343)
T KOG1371|consen 4 HVLVTGGAGYIGS-HTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVK 77 (343)
T ss_pred EEEEecCCcceeh-HHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcC
Confidence 35555554 222 2334577889988887765444333332 22 233567788888889999999887644
No 495
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
Probab=29.22 E-value=1.9e+02 Score=30.97 Aligned_cols=116 Identities=18% Similarity=0.125 Sum_probs=59.0
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCCcchH---HHHHHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEE---------
Q 009523 227 SASTVMLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT--------- 293 (532)
Q Consensus 227 ~Ai~~al~all~~Gd~VIv~~~~y~~t~---~~~~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~l--------- 293 (532)
+.-..-+..+.++|..+|+-+-.-+... ++++..-+.+ ..++.--+....++-+++|... ...+=+
T Consensus 250 e~dK~rl~ll~~aGvdvviLDSSqGnS~~qiemik~iK~~yP~l~ViaGNVVT~~qa~nLI~aG-aDgLrVGMGsGSiCi 328 (503)
T KOG2550|consen 250 DDDKERLDLLVQAGVDVVILDSSQGNSIYQLEMIKYIKETYPDLQIIAGNVVTKEQAANLIAAG-ADGLRVGMGSGSICI 328 (503)
T ss_pred cchhHHHHHhhhcCCcEEEEecCCCcchhHHHHHHHHHhhCCCceeeccceeeHHHHHHHHHcc-CceeEeccccCceee
Confidence 3334445556778876666665544422 2222111111 2222221222456666666542 222222
Q ss_pred eCCCCCCCccc--CHHHHHHHHHhCCCEEEEECCC-CCCCcccccccCCcEEE
Q 009523 294 ESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVL 343 (532)
Q Consensus 294 esP~NptG~v~--dl~~I~~la~~~gi~lIvDet~-a~~~~~~~l~~gaDivv 343 (532)
.-----.|+.+ -+-++++.|+++|+++|.|.-. ..+...+.+.+|++.|+
T Consensus 329 Tqevma~GrpQ~TAVy~va~~A~q~gvpviADGGiq~~Ghi~KAl~lGAstVM 381 (503)
T KOG2550|consen 329 TQKVMACGRPQGTAVYKVAEFANQFGVPCIADGGIQNVGHVVKALGLGASTVM 381 (503)
T ss_pred eceeeeccCCcccchhhHHHHHHhcCCceeecCCcCccchhHhhhhcCchhhe
Confidence 10000112221 3567889999999999999863 33445577778877554
No 496
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=28.53 E-value=4.8e+02 Score=25.55 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=60.3
Q ss_pred HHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCC------CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-CCHHH
Q 009523 206 VEEKMSALEGAESTVIMASGMSASTVMLLALVPAG------GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEG 278 (532)
Q Consensus 206 Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~G------d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-~dle~ 278 (532)
++..+..+.. -+.++++|..+ +......+...+ ..+.+-. .--...++.+|+.+.+++. .+.+.
T Consensus 41 l~~~l~~l~~-~d~vvfTS~~a-v~~~~~~l~~~~~~~~~~~~i~aVG-------~~Ta~~l~~~G~~~~~~p~~~~~~~ 111 (248)
T COG1587 41 LEVALEDLDS-ADWVVFTSPNA-VRFFFEALKEQGLDALKNKKIAAVG-------EKTAEALRKLGIKVDFIPEDGDSEG 111 (248)
T ss_pred HHHHHhcccc-CCEEEEECHHH-HHHHHHHHHhhcccccccCeEEEEc-------HHHHHHHHHhCCCCCcCCCccchHH
Confidence 7777777766 56777777663 333333333333 3333321 1122467888998888865 35555
Q ss_pred HHHhhcCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCC
Q 009523 279 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 279 Le~al~~~---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~ 328 (532)
+...+... ..+++++-+.. |+ +.|.+-..+.|+-+..=++|-.
T Consensus 112 l~~~l~~~~~~~~~vl~~~~~~---~r----~~l~~~L~~~G~~v~~~~~Y~~ 157 (248)
T COG1587 112 LLEELPELLKGGKRVLILRGNG---GR----EVLEEKLEERGAEVREVEVYRT 157 (248)
T ss_pred HHHHhhhhccCCCeEEEEcCCC---ch----HHHHHHHHhCCCEEEEEeeeee
Confidence 55555432 23666653332 32 5667777788887776556543
No 497
>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=28.39 E-value=3.9e+02 Score=25.62 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
-..++||+..+++-+.. =++=.++|+.-+.+.+...+.++-..+..+..-....... ..++..++.+..+. .+
T Consensus 27 lLlDaLekd~~eL~~~~~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl-~TA~~n~~~~~~V~----td 101 (209)
T KOG3191|consen 27 LLLDALEKDAAELKGHNPEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATL-ETARCNRVHIDVVR----TD 101 (209)
T ss_pred HHHHHHHHHHHHHhhcCceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHH-HHHHhcCCccceee----hh
Confidence 46788999988887743 3445577776666666666666666666554433322222 23344444433332 22
Q ss_pred HHHhhcCCCeeEEEEeCCCCCC
Q 009523 279 LEAALNNNNVSLFFTESPTNPF 300 (532)
Q Consensus 279 Le~al~~~~tklV~lesP~Npt 300 (532)
|...|+++++.+++++.|.-||
T Consensus 102 l~~~l~~~~VDvLvfNPPYVpt 123 (209)
T KOG3191|consen 102 LLSGLRNESVDVLVFNPPYVPT 123 (209)
T ss_pred HHhhhccCCccEEEECCCcCcC
Confidence 3444444578888886665444
No 498
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=28.34 E-value=2.8e+02 Score=30.99 Aligned_cols=100 Identities=16% Similarity=0.169 Sum_probs=55.1
Q ss_pred CcEEEeCCHH-H-HHHHHHHHhccCCCE----EEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeE
Q 009523 217 ESTVIMASGM-S-ASTVMLLALVPAGGH----IVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSL 290 (532)
Q Consensus 217 ~~~i~~sSG~-~-Ai~~al~all~~Gd~----VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tkl 290 (532)
+-++++++|. . .|..++....+.... |-.....+ .-..+.+..++.+|.+.+.+. ...+++.+++.+ -+
T Consensus 232 pvg~~lSGGlDSS~Iaa~a~~~~~~~~~~~fsvg~~~~~~-~D~~~a~~~A~~lg~~h~~~~-~~~~e~~~~~~~---vv 306 (542)
T COG0367 232 PVGVFLSGGLDSSLIAAIAAEELGKEGKTTFTVGFEDSDS-PDAKYARAVAKFLGTPHHEII-LTNEELLNALPE---VV 306 (542)
T ss_pred cEEEEeCCCccHHHHHHHHHHhccccceeeeEeecCCCCC-chHHHHHHHHHHhCCCcEEEe-ecHHHHHHHHHH---HH
Confidence 4578888887 3 344433333332222 22222221 123334445555665333222 245666666643 34
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 291 FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 291 V~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
..++.|.. .....|+--+++.+++++..++.
T Consensus 307 ~~~~~p~~-~~~~~ply~~~~~a~~~g~kVvL 337 (542)
T COG0367 307 KALDTPGG-MAASIPLYLLSRKARAEGEKVVL 337 (542)
T ss_pred hhcCCCCc-ccchhHHHHHHHhhhhcCcEEee
Confidence 45667775 66777888999999999977776
No 499
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=28.06 E-value=5.5e+02 Score=25.36 Aligned_cols=99 Identities=15% Similarity=0.059 Sum_probs=57.5
Q ss_pred EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----------CCHHHHHHhhc---C
Q 009523 220 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----------ADMEGLEAALN---N 285 (532)
Q Consensus 220 i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-----------~dle~Le~al~---~ 285 (532)
+-+++.+.|+..++.++ .- .+|-+-.|.-......+..+++..|++|.-... .+++.+.+++. .
T Consensus 102 ~p~tt~~~A~~~AL~al-g~-~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~ 179 (239)
T TIGR02990 102 TPVVTPSSAAVDGLAAL-GV-RRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFD 179 (239)
T ss_pred CCeeCHHHHHHHHHHHc-CC-CEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcC
Confidence 44555666777777776 22 456555553333444455667888998876521 25666666654 2
Q ss_pred CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC
Q 009523 286 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 286 ~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet 325 (532)
.+..+|++. .+|- . -++-|.++=++.|.+++.=|.
T Consensus 180 ~~aDAifis-CTnL--r--t~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 180 PDADALFLS-CTAL--R--AATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCEEEEe-CCCc--h--hHHHHHHHHHHHCCCEEEHHH
Confidence 357888883 4432 1 133444555667888875444
No 500
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=28.05 E-value=4.6e+02 Score=26.25 Aligned_cols=43 Identities=28% Similarity=0.213 Sum_probs=26.6
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEEC
Q 009523 299 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 345 (532)
Q Consensus 299 ptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S 345 (532)
.+|...++.++++.|+++|+.+|. -+.....++..-+|+++..
T Consensus 196 ~sG~t~~~~~~~~~ak~~g~~ii~----IT~~~~s~la~~ad~~l~~ 238 (292)
T PRK11337 196 HSGRTSDVIEAVELAKKNGAKIIC----ITNSYHSPIAKLADYVICS 238 (292)
T ss_pred CCCCCHHHHHHHHHHHHCCCeEEE----EeCCCCChhHHhCCEEEEc
Confidence 346666788899999999876653 1222233444457777643
Done!