Query 009523
Match_columns 532
No_of_seqs 562 out of 3552
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 07:07:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009523.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009523hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ri6_A O-acetylhomoserine sulf 100.0 4.8E-66 1.6E-70 551.2 37.4 385 141-530 24-430 (430)
2 3ndn_A O-succinylhomoserine su 100.0 7.7E-64 2.7E-68 531.8 41.8 384 143-530 26-414 (414)
3 1qgn_A Protein (cystathionine 100.0 4.3E-63 1.5E-67 530.4 44.8 396 136-532 49-445 (445)
4 3nmy_A Xometc, cystathionine g 100.0 4.8E-63 1.6E-67 523.5 39.5 376 143-530 19-397 (400)
5 2fq6_A Cystathionine beta-lyas 100.0 2.4E-61 8.1E-66 512.8 40.5 383 143-532 25-414 (415)
6 3qhx_A Cystathionine gamma-syn 100.0 7.8E-59 2.7E-63 489.4 43.3 375 143-530 17-392 (392)
7 3acz_A Methionine gamma-lyase; 100.0 2.2E-57 7.6E-62 477.5 44.0 384 143-532 5-389 (389)
8 3cog_A Cystathionine gamma-lya 100.0 7E-57 2.4E-61 476.5 42.0 377 143-531 18-397 (403)
9 2ctz_A O-acetyl-L-homoserine s 100.0 2.7E-55 9.4E-60 466.6 39.0 384 144-530 3-421 (421)
10 1n8p_A Cystathionine gamma-lya 100.0 1.4E-54 4.7E-59 457.3 37.3 376 143-531 7-390 (393)
11 1gc0_A Methionine gamma-lyase; 100.0 4.1E-54 1.4E-58 453.5 39.1 386 143-531 9-396 (398)
12 1e5e_A MGL, methionine gamma-l 100.0 4.7E-52 1.6E-56 439.3 42.6 385 143-531 7-394 (404)
13 2cb1_A O-acetyl homoserine sul 100.0 1.9E-51 6.5E-56 435.3 43.3 381 144-532 3-412 (412)
14 2rfv_A Methionine gamma-lyase; 100.0 3.9E-49 1.3E-53 415.0 42.2 386 143-531 8-395 (398)
15 1cs1_A CGS, protein (cystathio 100.0 2E-47 6.7E-52 400.2 42.9 378 143-531 4-382 (386)
16 1ibj_A CBL, cystathionine beta 100.0 3E-47 1E-51 410.0 41.3 374 144-531 87-461 (464)
17 1pff_A Methionine gamma-lyase; 100.0 1.6E-40 5.4E-45 339.5 35.4 326 205-532 2-330 (331)
18 3i16_A Aluminum resistance pro 100.0 6.1E-35 2.1E-39 310.5 27.6 324 190-532 65-425 (427)
19 3hvy_A Cystathionine beta-lyas 100.0 2.5E-34 8.4E-39 305.8 28.2 324 190-532 66-425 (427)
20 3jzl_A Putative cystathionine 100.0 7.7E-34 2.6E-38 300.6 27.0 320 190-531 51-407 (409)
21 3cai_A Possible aminotransfera 100.0 1.5E-27 5E-32 249.7 27.8 303 193-532 61-405 (406)
22 1bs0_A Protein (8-amino-7-oxon 100.0 8E-27 2.7E-31 242.5 33.0 284 200-531 83-382 (384)
23 1t3i_A Probable cysteine desul 100.0 2.3E-27 7.8E-32 248.6 28.1 305 193-530 64-407 (420)
24 3lvm_A Cysteine desulfurase; s 100.0 3.1E-27 1E-31 248.6 29.0 305 195-530 62-397 (423)
25 3euc_A Histidinol-phosphate am 100.0 2.4E-27 8.2E-32 245.0 27.7 285 195-530 61-366 (367)
26 4hvk_A Probable cysteine desul 100.0 1.1E-27 3.6E-32 247.0 24.9 307 192-530 34-371 (382)
27 3get_A Histidinol-phosphate am 100.0 3E-27 1E-31 244.1 27.8 282 195-529 59-364 (365)
28 3ffh_A Histidinol-phosphate am 100.0 9.3E-27 3.2E-31 240.2 31.4 281 195-530 61-360 (363)
29 1fc4_A 2-amino-3-ketobutyrate 100.0 6.4E-27 2.2E-31 244.7 30.1 284 200-530 89-395 (401)
30 3op7_A Aminotransferase class 100.0 4.2E-27 1.4E-31 243.9 27.3 285 200-531 62-370 (375)
31 1jg8_A L-ALLO-threonine aldola 100.0 2.1E-27 7.3E-32 243.2 24.0 284 199-530 36-344 (347)
32 3tqx_A 2-amino-3-ketobutyrate 100.0 1.7E-26 5.7E-31 240.6 31.1 286 199-531 86-395 (399)
33 3ly1_A Putative histidinol-pho 100.0 6.8E-27 2.3E-31 240.1 26.8 283 195-530 45-350 (354)
34 1kmj_A Selenocysteine lyase; p 100.0 9.3E-27 3.2E-31 242.5 28.0 295 199-530 65-399 (406)
35 3ht4_A Aluminum resistance pro 100.0 2.8E-27 9.7E-32 252.0 24.5 258 198-471 62-345 (431)
36 3dzz_A Putative pyridoxal 5'-p 100.0 1.7E-26 5.8E-31 239.9 28.8 297 192-531 57-388 (391)
37 2w8t_A SPT, serine palmitoyltr 100.0 3E-26 1E-30 242.9 30.4 284 200-529 108-408 (427)
38 3vax_A Putative uncharacterize 100.0 2.5E-27 8.4E-32 247.3 21.6 307 192-530 54-398 (400)
39 2dr1_A PH1308 protein, 386AA l 100.0 5.7E-26 1.9E-30 235.3 31.2 293 195-530 47-377 (386)
40 1fg7_A Histidinol phosphate am 100.0 4.9E-26 1.7E-30 235.4 30.5 279 196-531 53-353 (356)
41 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 3.9E-27 1.3E-31 243.0 22.0 289 193-529 45-363 (371)
42 3a2b_A Serine palmitoyltransfe 100.0 1.4E-25 4.9E-30 234.4 33.4 284 199-530 86-390 (398)
43 4eb5_A Probable cysteine desul 99.9 1.5E-26 5.3E-31 239.2 24.9 303 198-530 40-371 (382)
44 4dq6_A Putative pyridoxal phos 99.9 7.9E-26 2.7E-30 234.9 28.7 280 191-515 61-374 (391)
45 3nra_A Aspartate aminotransfer 99.9 1.1E-26 3.8E-31 242.9 22.4 290 197-530 78-403 (407)
46 3zrp_A Serine-pyruvate aminotr 99.9 6.2E-26 2.1E-30 234.5 27.4 287 199-530 33-361 (384)
47 1elu_A L-cysteine/L-cystine C- 99.9 7.8E-26 2.7E-30 234.5 28.1 290 197-531 53-387 (390)
48 3hdo_A Histidinol-phosphate am 99.9 5E-26 1.7E-30 234.9 25.7 282 195-530 59-349 (360)
49 1eg5_A Aminotransferase; PLP-d 99.9 3.6E-26 1.2E-30 236.3 23.4 303 199-531 42-375 (384)
50 3kax_A Aminotransferase, class 99.9 2.5E-25 8.4E-30 230.5 29.5 280 192-515 54-366 (383)
51 3kki_A CAI-1 autoinducer synth 99.9 1.8E-25 6.2E-30 234.9 28.4 281 201-530 104-402 (409)
52 3frk_A QDTB; aminotransferase, 99.9 2.1E-26 7.2E-31 238.8 21.0 303 198-531 33-363 (373)
53 3ftb_A Histidinol-phosphate am 99.9 3.4E-25 1.1E-29 227.9 29.5 283 196-531 56-360 (361)
54 1lc5_A COBD, L-threonine-O-3-p 99.9 1.5E-25 5.3E-30 231.6 27.1 282 197-530 55-358 (364)
55 2z61_A Probable aspartate amin 99.9 1.1E-25 3.6E-30 233.1 25.9 264 202-515 67-352 (370)
56 1j32_A Aspartate aminotransfer 99.9 1.1E-25 3.7E-30 234.3 25.6 283 202-530 68-385 (388)
57 1b5p_A Protein (aspartate amin 99.9 5.3E-25 1.8E-29 229.6 30.7 271 202-520 69-370 (385)
58 2dou_A Probable N-succinyldiam 99.9 3E-25 1E-29 230.2 28.6 272 197-515 58-359 (376)
59 1c7n_A Cystalysin; transferase 99.9 3.2E-25 1.1E-29 231.6 28.9 285 203-530 68-391 (399)
60 1b9h_A AHBA synthase, protein 99.9 1.7E-25 6E-30 233.0 26.0 260 195-477 32-322 (388)
61 3uwc_A Nucleotide-sugar aminot 99.9 6.4E-26 2.2E-30 234.7 21.3 302 199-530 36-365 (374)
62 1o4s_A Aspartate aminotransfer 99.9 3.3E-25 1.1E-29 231.5 26.8 264 202-515 79-370 (389)
63 3nyt_A Aminotransferase WBPE; 99.9 4.2E-25 1.4E-29 228.9 27.3 302 199-531 33-359 (367)
64 3g0t_A Putative aminotransfera 99.9 2.3E-25 7.7E-30 235.6 25.6 295 197-530 77-435 (437)
65 3h14_A Aminotransferase, class 99.9 2.7E-25 9.2E-30 231.8 25.5 282 203-530 70-380 (391)
66 3l8a_A METC, putative aminotra 99.9 3.4E-25 1.2E-29 234.0 26.3 296 191-529 90-419 (421)
67 3fkd_A L-threonine-O-3-phospha 99.9 3.4E-25 1.2E-29 227.5 25.5 282 195-530 44-340 (350)
68 3ruy_A Ornithine aminotransfer 99.9 5.4E-25 1.9E-29 229.5 27.3 289 192-530 69-388 (392)
69 2o1b_A Aminotransferase, class 99.9 4.8E-25 1.6E-29 231.8 27.0 284 201-530 85-401 (404)
70 3isl_A Purine catabolism prote 99.9 2.9E-25 1E-29 232.5 25.2 289 200-531 43-389 (416)
71 2x5d_A Probable aminotransfera 99.9 8.8E-25 3E-29 229.9 28.6 285 200-530 74-396 (412)
72 1v2d_A Glutamine aminotransfer 99.9 1.8E-24 6.3E-29 224.7 30.7 284 197-529 56-368 (381)
73 3lws_A Aromatic amino acid bet 99.9 2.7E-25 9.2E-30 228.7 24.1 255 200-477 46-319 (357)
74 3ju7_A Putative PLP-dependent 99.9 5.2E-25 1.8E-29 230.3 26.4 304 200-531 35-370 (377)
75 2r2n_A Kynurenine/alpha-aminoa 99.9 2.6E-24 8.8E-29 227.7 32.0 273 218-530 110-422 (425)
76 1gd9_A Aspartate aminotransfer 99.9 9.9E-25 3.4E-29 227.1 28.1 283 202-530 64-384 (389)
77 3fvs_A Kynurenine--oxoglutarat 99.9 3.9E-25 1.3E-29 232.7 25.2 289 203-531 69-421 (422)
78 3ffr_A Phosphoserine aminotran 99.9 1.1E-24 3.9E-29 223.2 27.9 282 201-531 43-359 (362)
79 3dyd_A Tyrosine aminotransfera 99.9 1.4E-24 4.8E-29 230.1 29.4 284 200-530 95-422 (427)
80 3fdb_A Beta C-S lyase, putativ 99.9 1.4E-25 4.7E-30 232.1 21.0 281 204-531 61-375 (377)
81 3e2y_A Kynurenine-oxoglutarate 99.9 7.4E-25 2.5E-29 229.5 26.8 293 196-530 55-407 (410)
82 3jtx_A Aminotransferase; NP_28 99.9 1.7E-24 5.9E-29 225.6 29.1 275 203-520 68-383 (396)
83 3p1t_A Putative histidinol-pho 99.9 1.2E-24 4.2E-29 221.5 27.3 276 195-529 45-334 (337)
84 2z9v_A Aspartate aminotransfer 99.9 9.5E-25 3.2E-29 227.0 26.9 288 201-530 42-369 (392)
85 1u08_A Hypothetical aminotrans 99.9 4.4E-24 1.5E-28 222.2 31.5 284 203-531 69-385 (386)
86 3aow_A Putative uncharacterize 99.9 1.9E-24 6.5E-29 231.0 29.3 286 202-530 119-443 (448)
87 3nnk_A Ureidoglycine-glyoxylat 99.9 4.7E-25 1.6E-29 230.5 24.1 287 201-530 46-388 (411)
88 2aeu_A Hypothetical protein MJ 99.9 5.1E-25 1.8E-29 229.9 24.1 205 203-417 60-279 (374)
89 3ele_A Amino transferase; RER0 99.9 7.9E-25 2.7E-29 228.5 25.6 279 202-530 77-394 (398)
90 3cq5_A Histidinol-phosphate am 99.9 1.5E-24 5.1E-29 224.8 27.4 278 197-529 65-365 (369)
91 3pj0_A LMO0305 protein; struct 99.9 5.4E-25 1.8E-29 226.4 23.6 285 199-526 46-353 (359)
92 2zyj_A Alpha-aminodipate amino 99.9 7.3E-25 2.5E-29 229.1 24.8 287 201-530 74-391 (397)
93 3f9t_A TDC, L-tyrosine decarbo 99.9 1.2E-24 4E-29 225.4 25.9 277 200-530 68-392 (397)
94 1vjo_A Alanine--glyoxylate ami 99.9 6.9E-25 2.4E-29 228.4 24.2 259 200-478 66-359 (393)
95 2bwn_A 5-aminolevulinate synth 99.9 4.2E-24 1.5E-28 223.4 29.9 282 199-530 89-394 (401)
96 1iug_A Putative aspartate amin 99.9 1.8E-24 6.1E-29 221.2 26.3 280 201-529 34-341 (352)
97 1yiz_A Kynurenine aminotransfe 99.9 7.4E-24 2.5E-28 223.8 31.0 288 203-530 79-427 (429)
98 3ezs_A Aminotransferase ASPB; 99.9 5.6E-25 1.9E-29 227.7 22.0 277 203-530 61-373 (376)
99 2oga_A Transaminase; PLP-depen 99.9 2.1E-24 7.1E-29 226.4 26.0 212 200-421 62-297 (399)
100 2x5f_A Aspartate_tyrosine_phen 99.9 3.5E-24 1.2E-28 226.6 27.9 284 197-531 83-428 (430)
101 2huf_A Alanine glyoxylate amin 99.9 2E-24 6.9E-29 224.6 25.6 293 195-530 46-381 (393)
102 2zc0_A Alanine glyoxylate tran 99.9 2.3E-24 7.9E-29 225.7 26.2 287 202-531 76-403 (407)
103 3kgw_A Alanine-glyoxylate amin 99.9 9E-25 3.1E-29 226.5 22.8 290 200-531 55-387 (393)
104 1m32_A 2-aminoethylphosphonate 99.9 8.8E-25 3E-29 224.1 22.4 285 201-530 37-359 (366)
105 1vp4_A Aminotransferase, putat 99.9 1E-24 3.5E-29 230.6 23.3 286 202-530 86-416 (425)
106 1xi9_A Putative transaminase; 99.9 4.3E-24 1.5E-28 224.2 27.9 284 202-531 79-402 (406)
107 1d2f_A MALY protein; aminotran 99.9 1.7E-23 5.9E-28 218.0 31.9 284 203-530 65-387 (390)
108 3ppl_A Aspartate aminotransfer 99.9 2.8E-24 9.5E-29 227.3 26.1 288 201-530 78-418 (427)
109 1iay_A ACC synthase 2, 1-amino 99.9 2.8E-24 9.7E-29 227.1 26.2 290 196-530 77-425 (428)
110 3dr4_A Putative perosamine syn 99.9 3.5E-24 1.2E-28 223.5 26.4 305 198-531 53-388 (391)
111 2gb3_A Aspartate aminotransfer 99.9 8.4E-24 2.9E-28 222.3 28.6 285 202-530 80-400 (409)
112 2o0r_A RV0858C (N-succinyldiam 99.9 1.6E-23 5.6E-28 220.1 29.2 253 203-479 64-351 (411)
113 1mdo_A ARNB aminotransferase; 99.9 1.1E-23 3.7E-28 219.3 27.5 302 199-530 37-380 (393)
114 2ch1_A 3-hydroxykynurenine tra 99.9 5.8E-24 2E-28 221.4 24.7 294 195-530 45-381 (396)
115 1bw0_A TAT, protein (tyrosine 99.9 2E-23 6.7E-28 219.5 28.5 283 201-530 75-411 (416)
116 2yrr_A Aminotransferase, class 99.9 7E-24 2.4E-28 216.3 24.4 284 201-530 33-351 (353)
117 2bkw_A Alanine-glyoxylate amin 99.9 2.1E-23 7.3E-28 215.8 28.2 286 202-531 39-383 (385)
118 3b46_A Aminotransferase BNA3; 99.9 3.2E-23 1.1E-27 221.0 30.3 273 203-515 97-428 (447)
119 3ez1_A Aminotransferase MOCR f 99.9 1.7E-23 5.8E-28 220.6 27.9 288 201-530 70-413 (423)
120 2fnu_A Aminotransferase; prote 99.9 1.2E-23 4.1E-28 217.1 25.9 303 200-530 31-366 (375)
121 3if2_A Aminotransferase; YP_26 99.9 7.5E-24 2.6E-28 224.7 24.7 297 201-530 83-438 (444)
122 4adb_A Succinylornithine trans 99.9 9.2E-24 3.1E-28 220.8 24.9 291 193-530 73-398 (406)
123 2eh6_A Acoat, acetylornithine 99.9 7.8E-24 2.7E-28 219.0 23.4 280 197-530 66-372 (375)
124 3piu_A 1-aminocyclopropane-1-c 99.9 2E-23 6.9E-28 221.2 26.9 288 197-530 81-430 (435)
125 3f0h_A Aminotransferase; RER07 99.9 2.2E-23 7.4E-28 215.5 26.4 168 201-373 52-229 (376)
126 3nx3_A Acoat, acetylornithine 99.9 3E-23 1E-27 216.7 27.4 290 191-531 68-394 (395)
127 1v72_A Aldolase; PLP-dependent 99.9 1.2E-22 4.1E-27 207.9 31.0 277 199-530 41-347 (356)
128 3g7q_A Valine-pyruvate aminotr 99.9 3.6E-23 1.2E-27 217.1 27.1 294 201-530 75-411 (417)
129 3a9z_A Selenocysteine lyase; P 99.9 3E-23 1E-27 219.1 26.0 307 200-530 60-426 (432)
130 2c81_A Glutamine-2-deoxy-scyll 99.9 1.1E-22 3.9E-27 214.3 30.1 211 201-422 42-290 (418)
131 3t18_A Aminotransferase class 99.9 5.3E-23 1.8E-27 216.1 25.4 274 203-531 81-409 (413)
132 3tcm_A Alanine aminotransferas 99.9 1.4E-22 4.9E-27 219.5 29.3 287 202-531 135-493 (500)
133 3d6k_A Putative aminotransfera 99.9 5.2E-23 1.8E-27 217.5 25.2 292 197-530 71-416 (422)
134 1qz9_A Kynureninase; kynurenin 99.9 9E-23 3.1E-27 214.0 26.7 252 200-473 70-365 (416)
135 1uu1_A Histidinol-phosphate am 99.9 1.1E-22 3.8E-27 207.9 26.4 265 197-531 52-333 (335)
136 3e9k_A Kynureninase; kynurenin 99.9 3.6E-23 1.2E-27 221.4 22.5 284 201-530 111-459 (465)
137 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.2E-22 1.1E-26 208.8 29.1 302 199-529 32-389 (390)
138 1vef_A Acetylornithine/acetyl- 99.9 4.8E-23 1.7E-27 215.0 21.9 283 197-530 83-391 (395)
139 3qgu_A LL-diaminopimelate amin 99.9 5E-23 1.7E-27 218.9 22.2 283 201-530 111-438 (449)
140 3mad_A Sphingosine-1-phosphate 99.9 1.5E-22 5.3E-27 219.6 25.5 274 205-531 143-468 (514)
141 3rq1_A Aminotransferase class 99.9 2.4E-22 8.2E-27 211.5 26.1 274 203-531 82-414 (418)
142 3ihj_A Alanine aminotransferas 99.9 4E-22 1.4E-26 216.0 28.1 201 217-422 154-406 (498)
143 2ord_A Acoat, acetylornithine 99.9 3.4E-23 1.2E-27 216.5 18.5 283 198-532 79-397 (397)
144 2dkj_A Serine hydroxymethyltra 99.9 1.9E-22 6.6E-27 210.6 23.7 291 199-530 63-386 (407)
145 3hbx_A GAD 1, glutamate decarb 99.9 3.4E-22 1.2E-26 216.8 26.4 285 205-531 99-443 (502)
146 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 7.1E-22 2.4E-26 209.9 28.0 310 198-531 59-431 (437)
147 1z7d_A Ornithine aminotransfer 99.9 9.2E-22 3.2E-26 209.2 27.9 289 198-530 104-427 (433)
148 3mc6_A Sphingosine-1-phosphate 99.9 4E-22 1.4E-26 215.1 25.4 276 204-531 110-436 (497)
149 2po3_A 4-dehydrase; external a 99.9 3.3E-21 1.1E-25 203.6 31.3 210 200-421 51-283 (424)
150 2oat_A Ornithine aminotransfer 99.9 1.9E-21 6.3E-26 207.3 29.6 288 198-531 115-438 (439)
151 1svv_A Threonine aldolase; str 99.9 4.5E-22 1.5E-26 203.6 23.8 285 192-530 40-352 (359)
152 3ke3_A Putative serine-pyruvat 99.9 8.9E-22 3.1E-26 205.2 26.2 290 201-531 35-375 (379)
153 2pb2_A Acetylornithine/succiny 99.9 1.4E-21 4.7E-26 206.8 27.8 285 197-531 95-417 (420)
154 3ei9_A LL-diaminopimelate amin 99.9 7.7E-22 2.6E-26 208.7 25.7 278 196-521 92-414 (432)
155 3f6t_A Aspartate aminotransfer 99.9 7.4E-22 2.5E-26 215.7 23.1 158 203-366 140-330 (533)
156 1o69_A Aminotransferase; struc 99.9 9.4E-21 3.2E-25 198.3 29.9 302 200-530 31-381 (394)
157 2c0r_A PSAT, phosphoserine ami 99.9 6E-22 2E-26 204.2 20.3 274 202-530 50-355 (362)
158 3n0l_A Serine hydroxymethyltra 99.9 2.9E-21 9.9E-26 202.3 25.7 286 205-530 75-387 (417)
159 3bwn_A AT1G70560, L-tryptophan 99.9 1.3E-21 4.6E-26 205.1 22.5 269 204-515 71-368 (391)
160 7aat_A Aspartate aminotransfer 99.9 4E-21 1.4E-25 200.8 25.4 212 202-418 72-336 (401)
161 1w23_A Phosphoserine aminotran 99.9 2.8E-22 9.7E-27 205.9 15.7 274 202-530 49-354 (360)
162 2dgk_A GAD-beta, GADB, glutama 99.9 6.9E-21 2.4E-25 203.2 26.8 287 203-530 83-432 (452)
163 3dxv_A Alpha-amino-epsilon-cap 99.9 4.8E-21 1.6E-25 203.1 25.0 292 192-531 77-424 (439)
164 1ajs_A Aspartate aminotransfer 99.9 6.5E-21 2.2E-25 199.9 25.7 215 199-418 72-344 (412)
165 3meb_A Aspartate aminotransfer 99.9 7.2E-21 2.5E-25 203.1 26.3 224 192-418 87-371 (448)
166 3b1d_A Betac-S lyase; HET: PLP 99.8 3E-24 1E-28 224.3 0.0 284 203-529 68-390 (392)
167 2vi8_A Serine hydroxymethyltra 99.9 1.9E-21 6.4E-26 203.0 20.5 292 199-530 63-385 (405)
168 1s0a_A Adenosylmethionine-8-am 99.9 9.9E-21 3.4E-25 200.1 26.2 285 195-529 80-417 (429)
169 1ax4_A Tryptophanase; tryptoph 99.9 5.3E-21 1.8E-25 204.1 23.5 253 199-476 74-390 (467)
170 3asa_A LL-diaminopimelate amin 99.9 1E-20 3.6E-25 198.1 25.0 255 200-479 74-359 (400)
171 3gbx_A Serine hydroxymethyltra 99.9 4.9E-21 1.7E-25 200.6 22.4 252 202-476 77-349 (420)
172 1sff_A 4-aminobutyrate aminotr 99.9 1E-20 3.5E-25 199.1 24.7 286 196-530 79-422 (426)
173 2ez2_A Beta-tyrosinase, tyrosi 99.9 2E-20 6.8E-25 199.2 25.7 211 199-418 73-332 (456)
174 1rv3_A Serine hydroxymethyltra 99.9 1.6E-20 5.5E-25 202.6 24.6 211 205-422 94-347 (483)
175 2eo5_A 419AA long hypothetical 99.9 3.3E-20 1.1E-24 195.9 26.3 283 196-531 81-417 (419)
176 3fsl_A Aromatic-amino-acid ami 99.9 2.5E-20 8.6E-25 194.1 25.1 213 201-418 70-333 (397)
177 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.2E-20 1.1E-24 198.6 26.5 210 202-419 134-370 (456)
178 1wyu_B Glycine dehydrogenase s 99.9 3.1E-20 1.1E-24 199.7 26.5 211 202-418 108-363 (474)
179 3ecd_A Serine hydroxymethyltra 99.9 3.1E-20 1.1E-24 194.7 25.8 250 205-477 82-351 (425)
180 3a8u_X Omega-amino acid--pyruv 99.9 6.2E-20 2.1E-24 195.3 28.0 288 197-531 89-446 (449)
181 2q7w_A Aspartate aminotransfer 99.9 2.1E-20 7E-25 194.7 23.4 215 199-418 67-332 (396)
182 3h7f_A Serine hydroxymethyltra 99.9 5.3E-20 1.8E-24 196.3 25.9 205 208-418 98-321 (447)
183 2fyf_A PSAT, phosphoserine ami 99.9 2.4E-20 8.3E-25 195.2 22.8 283 201-531 78-397 (398)
184 1yaa_A Aspartate aminotransfer 99.9 3.8E-20 1.3E-24 194.2 24.2 214 200-418 72-344 (412)
185 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5.2E-21 1.8E-25 204.4 17.0 166 192-369 48-230 (446)
186 4f4e_A Aromatic-amino-acid ami 99.9 6.6E-20 2.3E-24 193.4 25.3 213 201-418 92-355 (420)
187 2a7v_A Serine hydroxymethyltra 99.9 3.5E-20 1.2E-24 200.0 23.6 263 192-477 85-396 (490)
188 4eu1_A Mitochondrial aspartate 99.9 4.4E-20 1.5E-24 193.7 23.3 214 200-418 78-344 (409)
189 2hox_A ALLIIN lyase 1; cystein 99.9 1.4E-20 4.7E-25 199.9 19.3 269 203-515 102-406 (427)
190 2ay1_A Aroat, aromatic amino a 99.8 2.9E-20 1E-24 193.6 20.6 213 201-418 69-329 (394)
191 4a6r_A Omega transaminase; tra 99.8 3.4E-19 1.2E-23 190.6 29.3 289 193-530 86-447 (459)
192 1zod_A DGD, 2,2-dialkylglycine 99.8 1.9E-19 6.5E-24 190.3 27.1 290 196-530 80-430 (433)
193 3gju_A Putative aminotransfera 99.8 3.8E-19 1.3E-23 190.3 29.4 291 193-530 87-454 (460)
194 3vp6_A Glutamate decarboxylase 99.8 1.5E-19 5.2E-24 196.4 26.3 222 198-424 128-414 (511)
195 3i4j_A Aminotransferase, class 99.8 2.8E-19 9.5E-24 189.0 27.3 295 196-531 67-427 (430)
196 3tfu_A Adenosylmethionine-8-am 99.8 6.9E-20 2.4E-24 196.3 22.6 290 194-531 111-452 (457)
197 1c4k_A Protein (ornithine deca 99.8 1.5E-19 5E-24 203.6 26.1 218 199-422 171-443 (730)
198 2epj_A Glutamate-1-semialdehyd 99.8 8.5E-20 2.9E-24 193.4 22.4 259 197-477 92-401 (434)
199 1js3_A DDC;, DOPA decarboxylas 99.8 9.2E-20 3.1E-24 196.3 22.7 245 200-468 108-428 (486)
200 3l44_A Glutamate-1-semialdehyd 99.8 1.1E-19 3.8E-24 192.3 22.8 285 197-530 91-428 (434)
201 2zy4_A L-aspartate beta-decarb 99.8 1.5E-19 5.1E-24 198.0 23.4 150 218-371 167-338 (546)
202 4e77_A Glutamate-1-semialdehyd 99.8 2.2E-19 7.7E-24 189.8 24.0 258 198-477 90-399 (429)
203 3n5m_A Adenosylmethionine-8-am 99.8 4.5E-19 1.5E-23 188.9 25.9 296 193-531 83-451 (452)
204 3dod_A Adenosylmethionine-8-am 99.8 2.9E-19 9.9E-24 190.4 24.3 286 196-530 82-441 (448)
205 3oks_A 4-aminobutyrate transam 99.8 3E-19 1E-23 190.7 24.3 291 193-530 96-449 (451)
206 2okj_A Glutamate decarboxylase 99.8 3.9E-19 1.3E-23 192.4 25.4 218 201-422 128-409 (504)
207 3hmu_A Aminotransferase, class 99.8 1E-18 3.5E-23 187.9 26.4 288 193-530 91-450 (472)
208 2qma_A Diaminobutyrate-pyruvat 99.8 3.1E-19 1.1E-23 192.9 22.2 241 192-455 129-433 (497)
209 1wyu_A Glycine dehydrogenase ( 99.8 8.7E-19 3E-23 186.2 24.9 279 201-531 108-435 (438)
210 4ffc_A 4-aminobutyrate aminotr 99.8 1.6E-18 5.4E-23 185.4 26.9 292 192-530 98-447 (453)
211 3k28_A Glutamate-1-semialdehyd 99.8 2.9E-19 1E-23 189.1 21.1 286 197-531 89-426 (429)
212 2cy8_A D-phgat, D-phenylglycin 99.8 6.7E-19 2.3E-23 187.6 23.7 235 198-455 94-367 (453)
213 2e7u_A Glutamate-1-semialdehyd 99.8 6.8E-19 2.3E-23 185.8 23.3 257 198-477 89-397 (424)
214 2oqx_A Tryptophanase; lyase, p 99.8 2.6E-19 8.8E-24 191.0 19.8 295 200-530 73-440 (467)
215 4e1o_A HDC, histidine decarbox 99.8 1.2E-18 4.1E-23 187.8 25.0 253 192-468 107-432 (481)
216 2vyc_A Biodegradative arginine 99.8 5.9E-19 2E-23 199.9 23.6 218 195-420 199-466 (755)
217 2cjg_A L-lysine-epsilon aminot 99.8 9.1E-19 3.1E-23 186.9 23.7 281 196-530 96-446 (449)
218 2jis_A Cysteine sulfinic acid 99.8 2.8E-18 9.5E-23 186.4 27.5 215 203-423 150-425 (515)
219 3i5t_A Aminotransferase; pyrid 99.8 4.8E-18 1.6E-22 182.9 29.1 292 193-530 88-452 (476)
220 3k40_A Aromatic-L-amino-acid d 99.8 1.9E-18 6.5E-23 186.1 23.7 249 199-469 107-426 (475)
221 3fq8_A Glutamate-1-semialdehyd 99.8 1.4E-18 4.8E-23 183.5 20.8 258 198-477 89-397 (427)
222 3k7y_A Aspartate aminotransfer 99.8 8.4E-18 2.9E-22 177.5 25.9 217 192-416 65-333 (405)
223 3e77_A Phosphoserine aminotran 99.8 8.9E-19 3E-23 183.0 17.3 281 200-531 57-370 (377)
224 3qm2_A Phosphoserine aminotran 99.8 2.5E-18 8.5E-23 180.3 17.2 282 196-531 67-380 (386)
225 3m5u_A Phosphoserine aminotran 99.7 7.2E-17 2.4E-21 167.8 21.2 275 200-531 49-355 (361)
226 2yky_A Beta-transaminase; tran 99.6 1.4E-19 4.7E-24 194.2 0.0 240 197-455 136-398 (465)
227 3n75_A LDC, lysine decarboxyla 99.7 1.2E-16 4.2E-21 178.7 21.4 213 198-419 192-443 (715)
228 1ohv_A 4-aminobutyrate aminotr 99.7 2.7E-16 9.1E-21 169.1 20.7 275 202-529 111-464 (472)
229 4h51_A Aspartate aminotransfer 99.7 1.1E-14 3.9E-19 154.2 25.1 220 192-418 80-351 (420)
230 4ao9_A Beta-phenylalanine amin 99.6 2.9E-14 1E-18 152.1 22.1 234 199-454 125-383 (454)
231 3ou5_A Serine hydroxymethyltra 99.6 5.7E-14 1.9E-18 147.3 23.3 254 192-468 85-390 (490)
232 4atq_A 4-aminobutyrate transam 99.6 9.8E-14 3.3E-18 148.4 24.3 291 199-531 105-454 (456)
233 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 4.1E-13 1.4E-17 142.4 24.5 218 196-419 89-338 (450)
234 4e3q_A Pyruvate transaminase; 99.5 8.2E-13 2.8E-17 141.8 23.6 284 199-531 109-467 (473)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 2.3E-13 7.9E-18 143.3 17.7 194 219-418 137-355 (501)
236 4a0g_A Adenosylmethionine-8-am 99.5 3.9E-13 1.3E-17 153.6 16.8 286 197-531 420-827 (831)
237 3dr5_A Putative O-methyltransf 56.6 93 0.0032 28.5 11.4 122 199-326 37-165 (221)
238 2yxb_A Coenzyme B12-dependent 52.2 26 0.00089 31.0 6.3 66 250-317 31-97 (161)
239 3gi1_A LBP, laminin-binding pr 48.3 34 0.0012 33.3 7.0 70 239-322 178-256 (286)
240 1qop_A Tryptophan synthase alp 48.3 49 0.0017 31.7 8.1 89 234-324 116-212 (268)
241 3vnd_A TSA, tryptophan synthas 48.2 45 0.0015 32.2 7.7 90 232-323 115-212 (267)
242 2yvq_A Carbamoyl-phosphate syn 46.1 29 0.001 30.0 5.5 87 227-322 37-130 (143)
243 1tks_A 3,4-dihydroxy-2-butanon 45.1 25 0.00086 32.6 5.0 36 287-322 159-194 (204)
244 3i6i_A Putative leucoanthocyan 44.4 60 0.0021 31.7 8.3 86 233-322 27-116 (346)
245 3sho_A Transcriptional regulat 44.2 61 0.0021 28.5 7.6 42 300-347 97-140 (187)
246 1xrs_B D-lysine 5,6-aminomutas 43.6 1.4E+02 0.0049 28.6 10.4 82 261-345 152-241 (262)
247 2xhz_A KDSD, YRBH, arabinose 5 42.5 1.2E+02 0.0041 26.4 9.3 40 299-344 105-146 (183)
248 3tla_A MCCF; serine protease, 41.7 65 0.0022 32.6 8.1 69 237-305 40-127 (371)
249 1pq4_A Periplasmic binding pro 41.4 61 0.0021 31.5 7.6 70 239-322 189-265 (291)
250 2o1e_A YCDH; alpha-beta protei 41.3 44 0.0015 32.9 6.6 69 239-321 189-266 (312)
251 4h1h_A LMO1638 protein; MCCF-l 41.1 48 0.0016 32.9 6.9 70 236-305 8-96 (327)
252 1vhx_A Putative holliday junct 40.6 31 0.0011 30.2 4.8 54 275-328 43-102 (150)
253 3ruf_A WBGU; rossmann fold, UD 40.2 1.6E+02 0.0053 28.4 10.6 73 219-293 27-106 (351)
254 3ic5_A Putative saccharopine d 39.6 1.3E+02 0.0046 23.4 9.2 90 218-321 7-97 (118)
255 2r6j_A Eugenol synthase 1; phe 39.4 66 0.0023 30.8 7.6 83 233-322 28-112 (318)
256 1qyd_A Pinoresinol-lariciresin 38.6 1.1E+02 0.0038 28.9 9.1 84 233-319 21-110 (313)
257 3ecs_A Translation initiation 38.4 2.5E+02 0.0086 27.6 11.5 102 215-323 120-229 (315)
258 3c85_A Putative glutathione-re 38.1 56 0.0019 28.7 6.3 88 217-317 40-130 (183)
259 4e5s_A MCCFLIKE protein (BA_56 38.1 59 0.002 32.3 7.0 69 236-304 8-95 (331)
260 2avd_A Catechol-O-methyltransf 38.1 2.2E+02 0.0075 25.4 11.3 123 200-326 54-181 (229)
261 3inp_A D-ribulose-phosphate 3- 37.6 93 0.0032 29.6 8.0 81 260-343 129-221 (246)
262 1y80_A Predicted cobalamin bin 37.4 66 0.0023 29.3 6.8 71 253-325 104-179 (210)
263 3tr6_A O-methyltransferase; ce 37.4 2.2E+02 0.0076 25.3 10.9 123 199-326 48-176 (225)
264 3nav_A Tryptophan synthase alp 36.6 79 0.0027 30.5 7.4 88 233-322 118-213 (271)
265 3mfq_A TROA, high-affinity zin 36.2 22 0.00076 34.5 3.4 71 241-322 164-243 (282)
266 3tfw_A Putative O-methyltransf 36.2 2.6E+02 0.0089 25.7 11.1 122 200-326 48-172 (248)
267 3dm5_A SRP54, signal recogniti 36.0 1.6E+02 0.0056 30.4 10.2 93 234-327 122-225 (443)
268 3sr3_A Microcin immunity prote 35.8 70 0.0024 31.8 7.2 69 236-304 9-96 (336)
269 3c3y_A Pfomt, O-methyltransfer 35.7 2.6E+02 0.0088 25.5 11.3 123 200-326 55-183 (237)
270 1zco_A 2-dehydro-3-deoxyphosph 35.4 1.2E+02 0.0042 28.9 8.6 67 264-330 129-205 (262)
271 2xw6_A MGS, methylglyoxal synt 34.6 30 0.001 29.8 3.6 58 264-322 48-110 (134)
272 3llv_A Exopolyphosphatase-rela 34.4 1.3E+02 0.0043 24.9 7.8 73 217-296 7-79 (141)
273 3ujp_A Mn transporter subunit; 34.0 78 0.0027 31.1 7.0 67 240-320 190-265 (307)
274 1b93_A Protein (methylglyoxal 32.7 53 0.0018 28.9 4.9 58 264-322 56-118 (152)
275 3r3h_A O-methyltransferase, SA 32.5 1.6E+02 0.0055 27.2 8.8 123 200-327 45-173 (242)
276 1sui_A Caffeoyl-COA O-methyltr 32.3 3E+02 0.01 25.3 12.6 123 200-326 64-192 (247)
277 4af0_A Inosine-5'-monophosphat 32.1 1E+02 0.0034 32.9 7.7 117 234-353 287-419 (556)
278 1vb5_A Translation initiation 31.9 2.3E+02 0.0079 27.1 10.0 109 206-322 99-216 (276)
279 3cbg_A O-methyltransferase; cy 31.3 3E+02 0.01 24.9 12.8 121 199-326 56-184 (232)
280 1xvl_A Mn transporter, MNTC pr 30.4 99 0.0034 30.5 7.2 68 240-321 204-280 (321)
281 1vmd_A MGS, methylglyoxal synt 30.4 54 0.0018 29.7 4.7 44 278-322 89-134 (178)
282 3tnl_A Shikimate dehydrogenase 30.0 1.9E+02 0.0066 28.3 9.2 79 217-298 155-237 (315)
283 4df3_A Fibrillarin-like rRNA/T 29.9 66 0.0022 30.3 5.5 125 197-325 53-184 (233)
284 2g1u_A Hypothetical protein TM 29.3 2.6E+02 0.0087 23.5 9.4 96 215-323 18-117 (155)
285 2zcu_A Uncharacterized oxidore 29.2 1.4E+02 0.0049 27.6 8.0 53 264-318 44-96 (286)
286 3keo_A Redox-sensing transcrip 29.0 1.9E+02 0.0065 26.7 8.4 104 202-325 67-180 (212)
287 3a11_A Translation initiation 28.6 2.1E+02 0.0072 28.4 9.3 104 213-323 138-249 (338)
288 3tha_A Tryptophan synthase alp 28.6 1.9E+02 0.0064 27.6 8.5 89 232-322 108-204 (252)
289 1iv0_A Hypothetical protein; r 28.6 67 0.0023 25.9 4.6 53 275-327 39-96 (98)
290 3duw_A OMT, O-methyltransferas 28.5 3.1E+02 0.011 24.3 11.5 124 200-327 43-170 (223)
291 1qyc_A Phenylcoumaran benzylic 28.3 94 0.0032 29.4 6.5 51 262-317 54-104 (308)
292 3e48_A Putative nucleoside-dip 28.0 1.5E+02 0.005 27.7 7.8 55 262-318 42-98 (289)
293 3hh8_A Metal ABC transporter s 27.7 68 0.0023 31.2 5.4 67 241-321 184-259 (294)
294 1g57_A DHBP synthase, 3,4-dihy 27.6 86 0.0029 29.3 5.7 35 287-322 167-201 (217)
295 3cx3_A Lipoprotein; zinc-bindi 27.5 53 0.0018 31.7 4.5 69 239-321 176-253 (284)
296 3c1o_A Eugenol synthase; pheny 27.5 1.1E+02 0.0038 29.1 6.9 56 262-322 54-110 (321)
297 2yva_A DNAA initiator-associat 27.4 2.8E+02 0.0097 24.2 9.3 37 280-321 104-140 (196)
298 2jl1_A Triphenylmethane reduct 27.0 2.4E+02 0.0083 26.0 9.2 92 220-318 3-99 (287)
299 1m3s_A Hypothetical protein YC 26.4 2.7E+02 0.0091 24.2 8.8 39 300-344 89-129 (186)
300 4gqr_A Pancreatic alpha-amylas 26.4 33 0.0011 35.2 3.0 85 238-325 7-98 (496)
301 1lss_A TRK system potassium up 26.4 2.5E+02 0.0086 22.5 9.1 89 218-317 6-94 (140)
302 1ccw_A Protein (glutamate muta 25.8 61 0.0021 27.6 4.1 75 249-325 15-93 (137)
303 1xp8_A RECA protein, recombina 25.6 2.6E+02 0.0089 27.9 9.4 23 221-243 54-77 (366)
304 3mio_A DHBP synthase, 3,4-dihy 25.6 99 0.0034 28.6 5.6 36 287-322 158-194 (206)
305 3kts_A Glycerol uptake operon 25.5 86 0.0029 28.7 5.2 82 274-374 17-100 (192)
306 2i2x_B MTAC, methyltransferase 25.1 78 0.0027 30.1 5.1 83 240-324 123-211 (258)
307 2gas_A Isoflavone reductase; N 25.1 1.6E+02 0.0056 27.6 7.6 51 262-317 53-103 (307)
308 2ioj_A Hypothetical protein AF 24.8 99 0.0034 26.1 5.3 48 268-322 55-103 (139)
309 3khj_A Inosine-5-monophosphate 24.7 3.9E+02 0.013 26.6 10.5 81 262-343 142-234 (361)
310 3f4w_A Putative hexulose 6 pho 24.7 2.4E+02 0.0083 25.1 8.4 100 241-343 79-185 (211)
311 3bo9_A Putative nitroalkan dio 24.6 4.2E+02 0.014 25.7 10.7 82 260-343 119-203 (326)
312 2cvh_A DNA repair and recombin 24.1 3.2E+02 0.011 23.9 9.1 40 281-321 100-150 (220)
313 3tsm_A IGPS, indole-3-glycerol 24.1 1.8E+02 0.0061 28.0 7.5 96 242-342 97-193 (272)
314 1snn_A DHBP synthase, 3,4-dihy 24.1 84 0.0029 29.6 4.9 35 287-322 178-212 (227)
315 1lu0_A CMTI-I, trypsin inhibit 23.9 17 0.00059 22.6 0.1 15 7-29 2-16 (29)
316 3nzo_A UDP-N-acetylglucosamine 23.9 4.7E+02 0.016 25.9 11.1 87 208-295 27-120 (399)
317 1zl0_A Hypothetical protein PA 23.7 1.8E+02 0.0062 28.5 7.6 75 236-310 13-106 (311)
318 1jeo_A MJ1247, hypothetical pr 23.3 2.6E+02 0.0091 24.0 8.1 39 300-345 92-132 (180)
319 3u81_A Catechol O-methyltransf 22.8 2.4E+02 0.0081 25.3 7.9 124 199-327 42-173 (221)
320 2ekc_A AQ_1548, tryptophan syn 22.1 1.4E+02 0.0047 28.4 6.3 89 233-323 115-212 (262)
321 3enk_A UDP-glucose 4-epimerase 22.0 2E+02 0.007 27.4 7.7 75 219-293 7-84 (341)
322 2prs_A High-affinity zinc upta 21.6 58 0.002 31.4 3.5 69 239-321 173-250 (284)
323 1mct_I Trypsin inhibitor A; co 21.5 19 0.00064 22.2 -0.1 15 7-29 2-16 (28)
324 3dqp_A Oxidoreductase YLBE; al 21.0 4.3E+02 0.015 23.2 9.3 77 232-317 16-97 (219)
325 8abp_A L-arabinose-binding pro 21.0 1E+02 0.0036 28.9 5.2 63 254-322 21-87 (306)
326 1toa_A Tromp-1, protein (perip 20.9 1.9E+02 0.0064 28.3 7.1 70 240-320 197-277 (313)
327 1ry2_A Acetyl-coenzyme A synth 20.9 3.1E+02 0.01 29.5 9.5 74 237-311 136-210 (663)
328 1xgk_A Nitrogen metabolite rep 20.8 2.7E+02 0.0093 27.2 8.4 81 233-317 22-103 (352)
329 1g94_A Alpha-amylase; beta-alp 20.4 48 0.0016 34.1 2.7 32 295-326 56-87 (448)
330 3dhn_A NAD-dependent epimerase 20.3 4.4E+02 0.015 23.1 9.5 55 232-294 20-74 (227)
331 3lyu_A Putative hydrogenase; t 20.2 99 0.0034 26.3 4.3 97 217-321 19-135 (142)
No 1
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=4.8e-66 Score=551.21 Aligned_cols=385 Identities=32% Similarity=0.487 Sum_probs=308.9
Q ss_pred CCCccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEE
Q 009523 141 LSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTV 220 (532)
Q Consensus 141 ~~~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i 220 (532)
|.+++|++||+|..++ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.++||++||+++|.+.++
T Consensus 24 m~~~~t~~~h~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v 101 (430)
T 3ri6_A 24 MRGFTTRALHVPKAKR--DVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVL 101 (430)
T ss_dssp -CCHHHHHHCCC----------------------------------------------CCHHHHHHHHHHHHHHTCSEEE
T ss_pred cCCcchhheeCCCCCC--CCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEE
Confidence 4568999999997653 34789999999999999999988777776667789999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCC
Q 009523 221 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 300 (532)
Q Consensus 221 ~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~Npt 300 (532)
+++||++|+.+++++++++||+|+++++.|+++...+...++..|+++++++.+|+++|++++++ +|++|++|+|+||+
T Consensus 102 ~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~-~t~~v~~e~p~Npt 180 (430)
T 3ri6_A 102 ALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDE-TTKLLFLETISNPQ 180 (430)
T ss_dssp EESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTT
T ss_pred EECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCC-CCeEEEEECCCCCC
Confidence 99999999999999999999999999999999988776677888999999999999999999987 79999999999999
Q ss_pred CcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe--ChHH-----------
Q 009523 301 LRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG--SGKL----------- 367 (532)
Q Consensus 301 G~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~--~~~l----------- 367 (532)
|.+.|+++|+++|+++|+++|+|++|+.+..+++...|+|++++|+||+++||+++++|+++. +..+
T Consensus 181 G~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~ 260 (430)
T 3ri6_A 181 LQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYA 260 (430)
T ss_dssp CCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHH
T ss_pred CeecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhh
Confidence 999999999999999999999999999988889999999999999999999999999999994 3222
Q ss_pred -------HHHHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHh
Q 009523 368 -------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 439 (532)
Q Consensus 368 -------i~~l~-~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~ 439 (532)
+++++ .....+|..++++.+|+++++++++..|++++.+|+++++++|+++|.|.+|.||+++++|+|++++
T Consensus 261 ~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~ 340 (430)
T 3ri6_A 261 KAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAK 340 (430)
T ss_dssp HHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHH
T ss_pred hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHH
Confidence 33333 2345678889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCccc-EEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH
Q 009523 440 QQMTGFGG-VVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF 518 (532)
Q Consensus 440 ~~~~g~G~-~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~ 518 (532)
+|+ |+|+ |+||+++ +.+.+.+|+++++++++++|+|+.+|++++|++++|..++++++.+.|+++++||||||+|++
T Consensus 341 ~~~-g~Gg~~lsf~l~-~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~ 418 (430)
T 3ri6_A 341 RQF-RYAGSILTFELE-SKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEI 418 (430)
T ss_dssp HHC-SSCCSEEEEECS-SHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCH
T ss_pred HhC-CCCceEEEEEEC-CHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCH
Confidence 999 9999 9999998 567889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 009523 519 EDLKADVLQALH 530 (532)
Q Consensus 519 ~dli~dL~~AL~ 530 (532)
+|+++||++||+
T Consensus 419 ~dl~~dl~~al~ 430 (430)
T 3ri6_A 419 EDLKEDILQALC 430 (430)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 999999999984
No 2
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-64 Score=531.81 Aligned_cols=384 Identities=33% Similarity=0.546 Sum_probs=360.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|++||+|...+ .++++.||||+|++|.|++.+++.+.+.+...+|.|+||++|+.++|+++|++++|.++++++
T Consensus 26 ~~~t~~~~~~~~~~---~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~ 102 (414)
T 3ndn_A 26 SQATVGVRGGMLRS---GFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFAT 102 (414)
T ss_dssp CHHHHHHHTTCCCC---TTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCCCC---CCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEE
Confidence 58899999997652 379999999999999999998888888777788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+.+++++++++||+|+++++.|+++...+...++..|+++++++.+|+++|++++++ +|++|++|+|+||+|.
T Consensus 103 ~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~-~t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 103 ASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSV-PTQAVFFETPSNPMQS 181 (414)
T ss_dssp SSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSS-CCSEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999887776667788999999999999999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHH-HHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~G~~ 381 (532)
+.|+++|+++|+++|+++|+|++|+.+....++..|+|++++|+||+++++|++++|+++++++.+. .++.....+|..
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~ 261 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 261 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999876677888999999999999999999888999999988776 677666778888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----H
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----L 457 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~ 457 (532)
+++..+++++++++++..|++++.+++++++++|+++|.+..+.||+++++|+|++++++++|+|++++|+++++ .
T Consensus 262 ~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~ 341 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAK 341 (414)
T ss_dssp CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876 6
Q ss_pred HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+.+.+|+++++++++++|+|+.+|++++|++++|..++++++.++|+++++||||+|+|+++|+++||++||+
T Consensus 342 ~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al~ 414 (414)
T 3ndn_A 342 QRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS 414 (414)
T ss_dssp HHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999984
No 3
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=4.3e-63 Score=530.37 Aligned_cols=396 Identities=87% Similarity=1.319 Sum_probs=366.4
Q ss_pred hhcccCCCccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhC
Q 009523 136 NEASFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG 215 (532)
Q Consensus 136 ~~~~~~~~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~g 215 (532)
++++|++..+|++||+|...+....++++.+|||+|+||.|++.+++.+.+.++..+|.|+|+++|+.+++|++|++++|
T Consensus 49 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g 128 (445)
T 1qgn_A 49 KYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEG 128 (445)
T ss_dssp CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHT
T ss_pred cccccCCCcccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhC
Confidence 56777765599999999765311357999999999999999999887777766677899999999999999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCe-eEEEEe
Q 009523 216 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV-SLFFTE 294 (532)
Q Consensus 216 a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~t-klV~le 294 (532)
+++.++++||++|+.+++++++++||+||++++.|++++.++...++..|+++++++.+|+++|++++++ +| ++|++|
T Consensus 129 ~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~-~tv~lV~le 207 (445)
T 1qgn_A 129 AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQ-KKVNLFFTE 207 (445)
T ss_dssp CSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHH-SCEEEEEEE
T ss_pred CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhcc-CCCCEEEEe
Confidence 9999999999999999999999999999999999999887776667888999999999999999999987 68 999999
Q ss_pred CCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH
Q 009523 295 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL 374 (532)
Q Consensus 295 sP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~ 374 (532)
+|+||+|.+.|+++|+++|+++|+++|+|++|+.++...++.+|+|++++|+||+++|++++++|++++++++++.++..
T Consensus 208 ~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~ 287 (445)
T 1qgn_A 208 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 287 (445)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHH
Confidence 99999999999999999999999999999999988777788889999999999999999988899999999999998887
Q ss_pred hhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 375 HHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 375 ~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
...+|+.++++.+|+++++++++..|++++.+++++++++|+++|.+.++.||+++++|+|+++++++++.|++++|+++
T Consensus 288 ~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~ 367 (445)
T 1qgn_A 288 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 367 (445)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred HHHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEEC
Confidence 77788889999999999999999999999999999999999999999899999999999999999999999999999998
Q ss_pred CCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 455 GDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 455 g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
++.+.+.+|++.++++++++|+|+++|++.+|+.++|..++++.+.++|+++++||||+|+|++++++++|+++|+++
T Consensus 368 ~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 368 GDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 445 (445)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 765678999999999999999999999999999999999999999999999999999999999999999999999865
No 4
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=4.8e-63 Score=523.48 Aligned_cols=376 Identities=39% Similarity=0.668 Sum_probs=349.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|+|..++ ..+++++||||++++|.|++.+ ...+|.|+|+++|+.++|+++|++++|+++++++
T Consensus 19 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~--------~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~ 88 (400)
T 3nmy_A 19 SLATLAIHGGQSPD--PSTGAVMPPIYATSTYAQSSPG--------EHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAF 88 (400)
T ss_dssp CHHHHHHHTTCCCC--TTTCBSSCCBCCCSBBBCSBTT--------BSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcchheeeCCCCCC--CCCCCcCCCccccceeeccCcc--------ccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 47899999997763 3589999999999999998753 3467999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHh-cccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 301 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~-l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG 301 (532)
+||++|+.+ +..++++||+|+++++.|++++..+... ++..|+++.+++.+|+++|++++++ ++++|++|+|+||+|
T Consensus 89 ~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~G 166 (400)
T 3nmy_A 89 ASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRA-DTKMVWIETPTNPML 166 (400)
T ss_dssp SSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred cCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhcc-CCCEEEEECCCCCCC
Confidence 999999998 5778999999999999999988877666 7778999999999999999999987 799999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEE-EEE-eChHHHHHHHHHhhhcC
Q 009523 302 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-SIS-GSGKLVTQIRNLHHVLG 379 (532)
Q Consensus 302 ~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG-~lv-~~~~li~~l~~~~~~~G 379 (532)
.+.|+++|+++|+++|+++|+|++|++++...++.+|+|++++|+||+++|+++.++| +++ .+++++++++.....+|
T Consensus 167 ~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g 246 (400)
T 3nmy_A 167 KLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIG 246 (400)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHC
T ss_pred eeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999987777888899999999999999999998899 555 46788888888888889
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH
Q 009523 380 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 459 (532)
Q Consensus 380 ~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~ 459 (532)
..++++.+|+++++++++..|++++.+++++++++|+++|.|..|.||+++++|+|++++++++|+|+|++|+++++.+.
T Consensus 247 ~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~ 326 (400)
T 3nmy_A 247 GVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDA 326 (400)
T ss_dssp CBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHH
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876677
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+.+|+++++++++++|+|+.+|++++|+.++|..++++.+.++|+++++||||+|+|+++|+++||++||+
T Consensus 327 ~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 327 AKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp HHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999985
No 5
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=2.4e-61 Score=512.84 Aligned_cols=383 Identities=27% Similarity=0.451 Sum_probs=349.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcc-cCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVI 221 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~ 221 (532)
+++|+++|+|..++ ..+++++||||+|+||.|++.+++.+.+.+. ..+|.|+|+++|+.++||++||+++|++++++
T Consensus 25 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~ 102 (415)
T 2fq6_A 25 KLDTQLVNAGRSKK--YTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVL 102 (415)
T ss_dssp CHHHHHHHTTCCHH--HHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Confidence 47899999997643 2478999999999999999998887777554 56799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC
Q 009523 222 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 301 (532)
Q Consensus 222 ~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG 301 (532)
++||++|+++++.+++++||+||++.+.|+++...+...++..|+++++++.+|+++|++++++ +|++|++|+|+||+|
T Consensus 103 ~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~-~tklV~~e~~~NptG 181 (415)
T 2fq6_A 103 FPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQP-NTKIVFLESPGSITM 181 (415)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCT-TEEEEEEESSCTTTC
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhcc-CCcEEEEECCCCCCC
Confidence 9999999999999999999999999999999988887777888999999999999999999987 799999999999999
Q ss_pred cccCHHHHHHHHHh--CCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcC
Q 009523 302 RCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 379 (532)
Q Consensus 302 ~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G 379 (532)
.++|+++|+++|++ +|+++|+|++|+.++...++.+|+|++++|+||+++|++++++|+++++++++++++......|
T Consensus 182 ~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G 261 (415)
T 2fq6_A 182 EVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMG 261 (415)
T ss_dssp CCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTT
T ss_pred EeecHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcC
Confidence 99999999999999 9999999999998877788889999999999999999998889999999888888887777778
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC--H
Q 009523 380 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--L 457 (532)
Q Consensus 380 ~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~--~ 457 (532)
..+++..+++++++++++..|++++.+|++.++++|+++|.+.++.||+++++|+|+++++++++.|++++|+++++ .
T Consensus 262 ~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~ 341 (415)
T 2fq6_A 262 QMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNN 341 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCH
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCH
Confidence 88899999999999999999999999999999999999999999999999999999999999988999999999873 6
Q ss_pred HHHHHHHHHcCCCceeecCCCccccccc--CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVDQ--PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~~--pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+++.+|++.++++++++|+|+++|++.+ |+.++|.... .++|+.+++||||+|+|+++|+|++|.++|+++
T Consensus 342 ~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~----~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 342 EELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQ----GEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp HHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTT----CCCCCCSCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccch----hhcCCCCCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 7899999999999999999999999998 8777664211 246888899999999999999999999999863
No 6
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=7.8e-59 Score=489.41 Aligned_cols=375 Identities=37% Similarity=0.583 Sum_probs=348.7
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|+|..++ ..++++.||||++++|.|++.+ +...+|.|+|+++|+.++|+++||+++|.++++++
T Consensus 17 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~ 87 (392)
T 3qhx_A 17 GLATRAIHSGYRPD--PATGAVNAPIYASSTFAQDGVG-------GLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAF 87 (392)
T ss_dssp CHHHHHHHSSCCCC--TTTCBSSCCBCCCSBBCCSSTT-------CCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcchhheeCCCCCC--CCCCCccCCcccCcceEecCcc-------cccCCccccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 47899999997653 3588999999999999998753 23457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+..++.+++++||+|+++.+.|+++...+...++..|+++.+++.+|+++|++++++ ++++|++++|+||+|.
T Consensus 88 ~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 166 (392)
T 3qhx_A 88 SSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRP-TTRLIWVETPTNPLLS 166 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCC-CCeEEEEECCCCCCcE
Confidence 999999999999999999999999999999888777777889999999999999999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~ 381 (532)
+.|+++|+++|+++|+++|+|++|+.++...+...|+|++++|+||++++++++++|+++++ +++++.++......|..
T Consensus 167 ~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 246 (392)
T 3qhx_A 167 IADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAV 246 (392)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCC
T ss_pred EecHHHHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999998888888899999999999999999998889999997 58888888887778888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
.+++.+++++++++++..|++++.+++++++++|+++|.+..+.||+++++|+|++++++++|.|++++|+++++.+.++
T Consensus 247 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~ 326 (392)
T 3qhx_A 247 PGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAE 326 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHH
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997667889
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+|++.++++++++|+|+.++++++|..++|..++.+ .+|+.+++||||+|+|+++|+|++|.++|+
T Consensus 327 ~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~g~~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 327 QLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp HHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTT---BCCCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHhCCCceECCCCCCCCceeeCcccccccccCHH---HcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999888765 789999999999999999999999999984
No 7
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=2.2e-57 Score=477.46 Aligned_cols=384 Identities=35% Similarity=0.562 Sum_probs=355.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|+| .. ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|...+|+++|++++|.++++++
T Consensus 5 ~~~t~~~~~~-~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 5 DITTTLLHPK-GD---HVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp CHHHHHHSCS-SC---CSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecC-CC---CCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 4689999999 32 3479999999999999999998888877666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+..++.+++++||+|+++++.|+++...+...++..|+++.+++..|+++|++++++ ++++|++|+|+||+|.
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 159 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKP-NTKMVYLESPANPTCK 159 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCT-TEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCe
Confidence 999999999999999999999999999999887766667788999999999999999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~ 381 (532)
+.|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++++++.++|++++++ +++++++.....+|..
T Consensus 160 ~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 239 (389)
T 3acz_A 160 VSDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSL 239 (389)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCC
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999887766778889999999999999999877789999998 8999888777667888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
.++..+++++++++++..|++++.++++.++++|++++.+.++.+|+++++|+++++.+++++.|++++|++++ .+...
T Consensus 240 ~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-~~~~~ 318 (389)
T 3acz_A 240 MAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-FEAAK 318 (389)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-HHHHH
T ss_pred CCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-HHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999986 67788
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
++++.++++.+++|+|+.+|++++|+.++|..++++++..+|+++++||||+|.|++++++++|.++|+++
T Consensus 319 ~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~~ 389 (389)
T 3acz_A 319 KLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALELW 389 (389)
T ss_dssp HHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999889999999999999999999999999999999999999999999999999999999999864
No 8
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=7e-57 Score=476.46 Aligned_cols=377 Identities=36% Similarity=0.609 Sum_probs=336.5
Q ss_pred CccccccccCCcCCCCCCC-CcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE
Q 009523 143 SDGSLAIHAGERLGRGIVT-DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 221 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~-~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~ 221 (532)
+++|+++|+|...+ ..+ +++.||||+|+||.+++..+ ..+|.|+||++|+..+||++||+++|.++.++
T Consensus 18 ~~~t~~~h~g~~~~--~~~~~~~~~pi~~stt~~~~~~~~--------~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~ 87 (403)
T 3cog_A 18 HFATQAIHVGQDPE--QWTSRAVVPPISLSTTFKQGAPGQ--------HSGFEYSRSGNPTRNCLEKAVAALDGAKYCLA 87 (403)
T ss_dssp THHHHHHHTTCCGG--GSTTCBSSCCBCCCSCBCCC----------------------CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcccEEEeCCCCCC--cCCCCCccCCeeccceeecCCccc--------cCCCcccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 47899999997653 246 89999999999999987532 23588999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCC
Q 009523 222 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 301 (532)
Q Consensus 222 ~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG 301 (532)
++||++|+..++. ++++||+|+++++.|++++..+...++..|+++.+++.+|+++|++++++ ++++|++++|+||+|
T Consensus 88 ~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~-~t~~v~~~~p~nptG 165 (403)
T 3cog_A 88 FASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITP-ETKLVWIETPTNPTQ 165 (403)
T ss_dssp ESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred ECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCC
Confidence 9999999999999 89999999999999999887776667888999999999899999999987 799999999999999
Q ss_pred cccCHHHHHHHHHhCC-CEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcC
Q 009523 302 RCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 379 (532)
Q Consensus 302 ~v~dl~~I~~la~~~g-i~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G 379 (532)
.+.|+++|+++|+++| +++|+|++|+.+....++.+|+|++++|+||+++|++++++|+++++ +++++.++.....+|
T Consensus 166 ~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g 245 (403)
T 3cog_A 166 KVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLG 245 (403)
T ss_dssp CCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_pred eeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999 99999999998876677788999999999999999988778999985 788888888777778
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH
Q 009523 380 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 459 (532)
Q Consensus 380 ~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~ 459 (532)
...+++.+++++++++++..|++++.+|++.++++|++++.|+++.+|+|+++|+++++.+++++.|++++|.+++..+.
T Consensus 246 ~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~ 325 (403)
T 3cog_A 246 AVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQH 325 (403)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHH
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999989999999999866577
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+|+++++++.+++|+|+++|++++|+.++|..++.+.+..+|+++++||||+|+|+.+++|++|.++|++
T Consensus 326 ~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 326 AEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp HHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 889999999998899999999999999999999999999999999999999999999999999999999975
No 9
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=2.7e-55 Score=466.57 Aligned_cols=384 Identities=31% Similarity=0.459 Sum_probs=343.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|+|...+ ..++++.||||+|++|.|++.++..+.+.++..+|.|+|+++|..++++++|++++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~ 80 (421)
T 2ctz_A 3 FETLQLHAGYEPE--PTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATA 80 (421)
T ss_dssp HHHHHHHTTCCCC--TTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred cceeeeeCCCCCC--cCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEec
Confidence 6799999997653 24799999999999999999988777766666789999999999999999999999998899999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe-CCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v-d~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
||++|+..++.+++++||+|+++.+.|+++...+...++..|+++.++ +.+|+++|++++++ +|++|++++|+||+|.
T Consensus 81 sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~n~~G~ 159 (421)
T 2ctz_A 81 SGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDE-KTRAWWVESIGNPALN 159 (421)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhcc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999998776655567789999999 98899999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCC-CCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC--hHH----HHHHHH--
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS--GKL----VTQIRN-- 373 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~-a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~--~~l----i~~l~~-- 373 (532)
+.|+++|.++|+++|+++|+|+++ +.++..+++..++|++++|+||+++++++.+||+++.+ .++ ++.++.
T Consensus 160 ~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~ 239 (421)
T 2ctz_A 160 IPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQ 239 (421)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCB
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhcccc
Confidence 999999999999999999999999 77665677788999999999999999887778888873 222 112210
Q ss_pred ------------------------HhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009523 374 ------------------------LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 429 (532)
Q Consensus 374 ------------------------~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl 429 (532)
....+|..+++..+|+++++++++..|++++.++++++.++|+++|+|..+.||++
T Consensus 240 ~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~ 319 (421)
T 2ctz_A 240 PGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGL 319 (421)
T ss_dssp GGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTS
T ss_pred chhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCC
Confidence 12346778899999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009523 430 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 508 (532)
Q Consensus 430 ~s~p~~~l~~~~~-~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~ 508 (532)
+++|+|+++++++ ++.|+|++|++++..+.+.+|+++++++++++++|+.++++.+|+.++|..++++.+..+|+++++
T Consensus 320 ~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~ 399 (421)
T 2ctz_A 320 PHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEM 399 (421)
T ss_dssp TTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTE
T ss_pred CCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCe
Confidence 9999999999999 789999999998644678899999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHh
Q 009523 509 VRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 509 IRlSvG~ed~~dli~dL~~AL~ 530 (532)
||+|+|+|++++++++|++||+
T Consensus 400 vRlS~g~e~~~~li~~l~~al~ 421 (421)
T 2ctz_A 400 VRLSVGLEHVEDLKAELKEALA 421 (421)
T ss_dssp EEEECCSSCHHHHHHHHHHHTC
T ss_pred EEEEeCCCCHHHHHHHHHHHhC
Confidence 9999999999999999999984
No 10
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=1.4e-54 Score=457.33 Aligned_cols=376 Identities=34% Similarity=0.587 Sum_probs=340.1
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|+|...+ .+++++||||+++||.|++.+ ....+|.|+|++++..+++|++||+++|.++.+++
T Consensus 7 ~~~t~~~~~~~~~~---~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~ 76 (393)
T 1n8p_A 7 KFATKAIHAGEHVD---VHGSVIEPISLSTTFKQSSPA-------NPIGTYEYSRSQNPNRENLERAVAALENAQYGLAF 76 (393)
T ss_dssp CHHHHHHHTTCCCC---SSCCSSCCBCCCSBCCBSSSS-------SBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CccceEEecCCCcc---CCCCcCCCcccccceeecccc-------ccccCcceecCCChhHHHHHHHHHHHhCCCcEEEE
Confidence 47899999997642 479999999999999997642 12257999999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+++++. ++++||+|+++.+.|+++...+...++..|+++++++.+| ++|++++++ +|++|++++|+||+|.
T Consensus 77 ~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~-~t~lv~~~~~~nptG~ 153 (393)
T 1n8p_A 77 SSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKE-NTKLVWIETPTNPTLK 153 (393)
T ss_dssp SCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCS-SEEEEEECSSCTTTCC
T ss_pred CChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhccc-CceEEEEECCCCCcce
Confidence 999999999999 9999999999999999887766556788899999999878 999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhC----CCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhh
Q 009523 303 CVDVKLVSDLCHKK----GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV 377 (532)
Q Consensus 303 v~dl~~I~~la~~~----gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~ 377 (532)
++|+++|.++|+++ |+++|+|++|+.+...++..+|+|++++|+||++|++|++++|+++++ +++++.++.....
T Consensus 154 ~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~ 233 (393)
T 1n8p_A 154 VTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA 233 (393)
T ss_dssp CCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999 999999999987654567778999999999999999988888999985 7888888877766
Q ss_pred cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCC-ceEEeCCCCCCCchhhhHhhhcCC-c-ccEEEEEEc
Q 009523 378 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTG-F-GGVVSFEVD 454 (532)
Q Consensus 378 ~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~-v~~V~~Pgl~s~p~~~l~~~~~~g-~-G~~vsf~l~ 454 (532)
+|..+++..++++.++++++..++++..++++.+.++|++++. +..+.+|+++++|+++++.+++++ . |++++|+++
T Consensus 234 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~ 313 (393)
T 1n8p_A 234 IGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIK 313 (393)
T ss_dssp HCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEES
T ss_pred cCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeC
Confidence 7888889999988889999999999999999999999999988 888999999999999999998877 7 999999998
Q ss_pred CCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 455 GDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 455 g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+.......|++.++++++++|+|++++++.+|+.++|..++.+.+.++|++++.||||+|+|+++++|+++.++|++
T Consensus 314 ~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 314 GGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 76567899999999999999999999999999999999999888999999999999999999999999999999975
No 11
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=4.1e-54 Score=453.47 Aligned_cols=386 Identities=37% Similarity=0.574 Sum_probs=318.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|+|...+ ..++++.+|+|+++||.+++..+....+.+...+|.|+|+++|..+++++++++++|.++++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~ 86 (398)
T 1gc0_A 9 GFATRAIHHGYDPQ--DHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 86 (398)
T ss_dssp CHHHHHHHTTCCGG--GGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 57899999997653 3478999999999999999887665555566678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
+||++|+..++.+++++||+|+++.+.|+++...+...+...|+++.+++..|+++|++++++ ++++|++++|+||+|.
T Consensus 87 ~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 165 (398)
T 1gc0_A 87 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTP-ATRVIYFESPANPNMH 165 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCcc
Confidence 999999999999999999999999999999887765556778999999999999999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHH-HHHHHhhh-cCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHV-LGG 380 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~-~G~ 380 (532)
+.|+++|.++|+++|+++|+|++|+.+....++..++|+++.|+||+++++++.++|+++++++.++ .++..... +|+
T Consensus 166 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 245 (398)
T 1gc0_A 166 MADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA 245 (398)
T ss_dssp CCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCC
Confidence 9999999999999999999999998765556677899999999999999998777899999987766 56655555 677
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009523 381 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 460 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~ 460 (532)
..++..++++.++++++..++++..++++.+.++|++++.+..+.+|+++++|+++++.+++++.|++++|++++..+.+
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (398)
T 1gc0_A 246 VLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAG 325 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999988889999999998644668
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.++++++++.++++|+|+.++++++|..++|..++.+.+..+|+++++||||+|+++++++|++|.++|++
T Consensus 326 ~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 326 RRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp HHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999975
No 12
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=4.7e-52 Score=439.35 Aligned_cols=385 Identities=33% Similarity=0.574 Sum_probs=346.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|+|.. + ..++++.+|+|+++++.++...+..+.+.+....|.|+|.++|+.++|++++++++|.++++++
T Consensus 7 ~~~t~~~~~~~~-~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~ 83 (404)
T 1e5e_A 7 TPATACIHANPQ-K--DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 83 (404)
T ss_dssp CHHHHHHHSSCC-C--CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCC-C--CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 368999999875 3 2368999999999999999987766555555678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
++|++|+..++.+++++||+|+++.+.|+++...+...++..|+++++++.+|+++|++++++ ++++|++++|+||||.
T Consensus 84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~t~~v~l~~p~NptG~ 162 (404)
T 1e5e_A 84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKP-NTKIVYFETPANPTLK 162 (404)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CCcEEEEECCCCCCCc
Confidence 999999999999999999999999999999877665567778999999998899999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHh-CCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHH-HHHHHhhhc-C
Q 009523 303 CVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-G 379 (532)
Q Consensus 303 v~dl~~I~~la~~-~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~-G 379 (532)
+.|+++|+++|++ +|+++|+|++|+.+....++.+|+|+++.|+||+++++++.++|++++++++++ .++...... |
T Consensus 163 v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g 242 (404)
T 1e5e_A 163 IIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITG 242 (404)
T ss_dssp CCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCC
T ss_pred ccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCC
Confidence 9999999999999 999999999998876556677899999999999999998766799999998888 787766555 7
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH
Q 009523 380 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 459 (532)
Q Consensus 380 ~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~ 459 (532)
...+++.++++.++++++..+++++.++++.+.++|++++.+.++.+|+|+++|+++++.+++++.|+++.|++++..+.
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (404)
T 1e5e_A 243 SVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEG 322 (404)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHH
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHH
Confidence 77889999999999999988999999999999999999999989999999999999999999889999999999754356
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+++++++++..++++|+.+|++++|+.++|..++++++...|+++++||||+|.|+.++++++|+++++.
T Consensus 323 ~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 323 AKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDA 394 (404)
T ss_dssp HHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 778999998888899999999999999999999999999999999899999999999999999999999874
No 13
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-51 Score=435.28 Aligned_cols=381 Identities=32% Similarity=0.505 Sum_probs=340.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
++|+++|+|...+ .+++++||||++++|.|++.+++.+.+. ...+|.|+|++++..+++|+++++++|.+++++++
T Consensus 3 ~~t~~~~~~~~~~---~~~~~~~pi~~s~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~ 78 (412)
T 2cb1_A 3 YTTLAVLAGLPED---PHGAVGLPIYAVAAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGALEAVVLA 78 (412)
T ss_dssp HHHHHHHTTCCCC---TTCCSSCCCCCCSBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred ccceeeecCCCcC---CCCCcCCCccccceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999997653 4789999999999999999988777665 45679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
||++|+..++.+++++||+|+++.+.|+++...+...++..|+++.+++.+ +++|++++++ ++++|++++|+||+|.+
T Consensus 79 ~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~i~~-~~~~v~~~~~~n~~G~~ 156 (412)
T 2cb1_A 79 SGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-PEAVREALSA-KTRAVFVETVANPALLV 156 (412)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS-HHHHHHHCCT-TEEEEEEESSCTTTCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-HHHHHHHhcc-CCeEEEEeCCCCCCccc
Confidence 999999999999999999999999999988776655577789999999864 9999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCccccCCCCCcEEEEEEeCh-----------------
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------------- 365 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~----------------- 365 (532)
.|+++|.++|+++|+++|+|++++.+ +...+...++|+++.|+||+++++++.+||+++.++
T Consensus 157 ~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 236 (412)
T 2cb1_A 157 PDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKG 236 (412)
T ss_dssp CCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC----
T ss_pred ccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccc
Confidence 99999999999999999999999877 666777789999999999999998877788887763
Q ss_pred ----------HHHHHHHHHh-hhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCch
Q 009523 366 ----------KLVTQIRNLH-HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 434 (532)
Q Consensus 366 ----------~li~~l~~~~-~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~ 434 (532)
++.+.++... ...|..+++..++++..+++.+..++++..++++++.++|.+++++..+.+|+++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 237 QIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp ---HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred cchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 4455555543 44566678999999888999998888888899999999999999998899999999999
Q ss_pred hhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009523 435 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 514 (532)
Q Consensus 435 ~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG 514 (532)
|+++++++++.|++++|.+ ++.+...+++++++++. +.|+|+.++++++|+.++|..++++++.++|+.++.||+|+|
T Consensus 317 ~~~~~~~~~~~~~iv~~~~-~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g 394 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL-GDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVG 394 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC-SSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECC
T ss_pred HHHHHHhCCCCceEEEEEe-CCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEec
Confidence 9999999999999999999 67678889999998888 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhC
Q 009523 515 VEDFEDLKADVLQALHAI 532 (532)
Q Consensus 515 ~ed~~dli~dL~~AL~~l 532 (532)
.++++++|++|.++|+++
T Consensus 395 ~~~~~~~i~~l~~al~~~ 412 (412)
T 2cb1_A 395 LEDPLDLLALFEEALEAV 412 (412)
T ss_dssp SSCHHHHHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHHHHhhC
Confidence 999999999999999753
No 14
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=3.9e-49 Score=414.98 Aligned_cols=386 Identities=37% Similarity=0.639 Sum_probs=341.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
++.|+++|+|...+ ..+.++.+|+++++++.++...+....+.+....|.|+|++++..+++++++++++|.++.+++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~ 85 (398)
T 2rfv_A 8 GFNTQIVHAGQQPD--PSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85 (398)
T ss_dssp CHHHHHHHTTCCCC--TTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCceeEeecCCcCc--cCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 46799999997643 2468899999999999999887655544555678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
++|++|+..++.+++++||+|+++.+.|+++...+...++..|+++..++..|+++|++++++ ++++|++++|+||||.
T Consensus 86 ~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 164 (398)
T 2rfv_A 86 ASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRP-ETKVVYIETPANPTLS 164 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCT-TEEEEEEESSBTTTTB
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999877665555778999999999999999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHH-HHHHHhhhc-CC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-GG 380 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~-G~ 380 (532)
+.|+++|.++|+++|+++|+|++|+.+....+...++|+++.|+||+++++++.++|++++++++++ .++.....+ |.
T Consensus 165 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T 2rfv_A 165 LVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG 244 (398)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCC
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998776556677899999999999999888666799999998887 676666666 77
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009523 381 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 460 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~ 460 (532)
..++..++++.++++.+..++++..++++.+.++|++++.+..+.+|+++++|++.+..+++++.|++++|++++..+..
T Consensus 245 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 324 (398)
T 2rfv_A 245 CMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAG 324 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHH
Confidence 78899999888999988889999999999999999999999999999999999999998887888999999998544567
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+++.++..++++++|+.++++++|...+|..++.+.+...|+.++.||||+|.+++++++++|.++|++
T Consensus 325 ~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 325 RRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp HHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 88999998889999999999999999888898889999999999999999999999999999999999975
No 15
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2e-47 Score=400.16 Aligned_cols=378 Identities=33% Similarity=0.554 Sum_probs=329.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEe
Q 009523 143 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 222 (532)
Q Consensus 143 ~~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~ 222 (532)
+++|+++|.|...+ ..++++.||||++++|.|++.+ ...+|.|+||++|...+|+++|+++++.++.+++
T Consensus 4 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~ 73 (386)
T 1cs1_A 4 KQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFN--------EPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLT 73 (386)
T ss_dssp CHHHHHHHTTTTCC--TTTCBSSCCBCCCSBBCCSBTT--------BCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecCCCcc--ccCCCCCCCccccceeeccccC--------CCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 36799999997542 3479999999999999987532 2357999999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc
Q 009523 223 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 302 (532)
Q Consensus 223 sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~ 302 (532)
++|++|+..++.+++++||+|+++.+.|+++...+...++..|+++..++.+|+++|++++++ ++++|++++|+||||.
T Consensus 74 ~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 152 (386)
T 1cs1_A 74 NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLLR 152 (386)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHT-CCSEEEEECSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcc-CCcEEEEeCCCCCCCc
Confidence 999999999999999999999999999998777665556778999999998899999999987 7999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 381 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~ 381 (532)
+.|+++|.++|+++|+++|+|++++.+....+...++|+++.|+||++++++.+++|++++++ ++++.++......+..
T Consensus 153 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~ 232 (386)
T 1cs1_A 153 VVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVT 232 (386)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCB
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999877554566788999999999999988766679999886 7888888766666667
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 382 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
.++..++.+.++++.+..++++..++++.+.++|++++.+..+.+|++.+.|++.++.++.++.|++++|.+++..+...
T Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (386)
T 1cs1_A 233 GGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLR 312 (386)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHH
T ss_pred CCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHH
Confidence 78888888888888888888899999999999999999998899999999999999988888889999999986545555
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
++++..++...+.++|+.++++++|..+.|...+.+.+..+|+.++.||||++.+++++++++|.++|++
T Consensus 313 ~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 313 RFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_dssp HHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 6666555544444589999999999988888888888899999899999999999999999999999875
No 16
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=3e-47 Score=409.95 Aligned_cols=374 Identities=33% Similarity=0.585 Sum_probs=330.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCcccccccccCChHHHHHHhhcccCCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 009523 144 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 223 (532)
Q Consensus 144 ~~t~~v~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~s 223 (532)
+.|.++|.+...+ ..+++.+||++++++.++... ....|.|+|+++|..+++++++++++|.+++++++
T Consensus 87 ~~~~~i~l~~g~~---~~~~~~~~i~~a~~~~~~~~~--------~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~ 155 (464)
T 1ibj_A 87 VSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFT 155 (464)
T ss_dssp HHHHHTCCCCSSC---TTCCSSCCCCCCSBCCCSSSS--------CCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred cCCeEEECCCCCC---CCCCCCccHHhhhhhhhhccc--------ccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEEC
Confidence 6788899875321 257899999999998866432 23468899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc
Q 009523 224 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 303 (532)
Q Consensus 224 SG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v 303 (532)
+|++|+.+++. ++++||+|+++++.|+++...+...++..|+++++++..|+++|++++++ ++++|++++|+||+|.+
T Consensus 156 sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~-~tk~v~l~~p~NptG~v 233 (464)
T 1ibj_A 156 SGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGP-QTKLVWLESPTNPRQQI 233 (464)
T ss_dssp SHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCS-SEEEEEECSSCTTTCCC
T ss_pred CHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhcc-CceEEEEeCCCCCCCEe
Confidence 99999988875 88999999999999999876665567788999999999999999999987 79999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCCc
Q 009523 304 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGAL 382 (532)
Q Consensus 304 ~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~ 382 (532)
.|+++|+++|+++|+++|+|++|+.+....+..+|+|++++|+||+++|++++++|++++++ ++++.++......|...
T Consensus 234 ~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~ 313 (464)
T 1ibj_A 234 SDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL 313 (464)
T ss_dssp CCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBC
T ss_pred ecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999877655677789999999999999998777889999985 78888887776677778
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 383 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
+++.+++++++++++..|+++..+++..++++|++++.+.++.+++|.++|+++++.++.++.|++++|+++ +.+....
T Consensus 314 ~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~ 392 (464)
T 1ibj_A 314 APFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKH 392 (464)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHH
T ss_pred CHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999998888888999999996 3445667
Q ss_pred HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 463 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|++.|+..++++++|+.++++++|+.++|...+.+.+..+|+.+++||||+|+|+.++++++|+++|++
T Consensus 393 ~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 393 LVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKT 461 (464)
T ss_dssp HHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHS
T ss_pred HHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999988888777777778888889999999999999999999999975
No 17
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=1.6e-40 Score=339.53 Aligned_cols=326 Identities=36% Similarity=0.589 Sum_probs=288.0
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhc
Q 009523 205 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN 284 (532)
Q Consensus 205 ~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~ 284 (532)
+|++++|+++|.++.++++||++|+..++.+++++||+|+++.++|+++...+...++..|+++.+++..|+++++++++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68999999999999999999999999999999999999999999999877665444566799999999889999999998
Q ss_pred CCCeeEEEEeCCCCCCCcccCHHHHHHHHHh-CCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCCCcEEEEEEe
Q 009523 285 NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG 363 (532)
Q Consensus 285 ~~~tklV~lesP~NptG~v~dl~~I~~la~~-~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~ 363 (532)
+ ++++|++++|+||||.+.|+++|.++|++ +|+++|+|++|+.+....+...++|+++.|+||++++++..++|++++
T Consensus 82 ~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~ 160 (331)
T 1pff_A 82 P-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCS 160 (331)
T ss_dssp T-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEE
T ss_pred C-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEe
Confidence 7 79999999999999999999999999999 999999999998654434557789999999999999887655899999
Q ss_pred Ch-HHHHHHHHHhhh-cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhh
Q 009523 364 SG-KLVTQIRNLHHV-LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQ 441 (532)
Q Consensus 364 ~~-~li~~l~~~~~~-~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~ 441 (532)
++ ++++.++..... .|...++..++.+.++++.+..++++..++.+.+.++|++++.+..+.++++.+.|++.++..+
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~ 240 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQ 240 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhh
Confidence 98 888888876655 5667888888888888988888888999999999999999988888999999998999988887
Q ss_pred cCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009523 442 MTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 521 (532)
Q Consensus 442 ~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dl 521 (532)
.++.|++++|.++ +.+...++++..++...++|+|+.++++++|+...|...+.+.+..+|++++.||||+|.++++++
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~ 319 (331)
T 1pff_A 241 MKMFGSMIAFDVD-GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDI 319 (331)
T ss_dssp CSSCCSEEEEECS-SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHH
T ss_pred CCCCceEEEEEEC-CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHH
Confidence 7788999999997 456677777776666558899999999999988888888988888999989999999999999999
Q ss_pred HHHHHHHHhhC
Q 009523 522 KADVLQALHAI 532 (532)
Q Consensus 522 i~dL~~AL~~l 532 (532)
++++.++|+++
T Consensus 320 i~~l~~~l~~~ 330 (331)
T 1pff_A 320 IDDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999999763
No 18
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=100.00 E-value=6.1e-35 Score=310.51 Aligned_cols=324 Identities=19% Similarity=0.248 Sum_probs=258.6
Q ss_pred cCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHH-------H
Q 009523 190 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFI-------E 258 (532)
Q Consensus 190 ~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~---~sSG~~Ai~~al~all~~Gd~VIv~~-~~y~~t~~~~-------~ 258 (532)
..+|.|+|. ..++||+++|+++|++.+++ ++||++|+..++.++++|||+|++++ +.|+++...+ .
T Consensus 65 ~~gy~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 141 (427)
T 3i16_A 65 SSGYGYGDI---GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNM 141 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSS
T ss_pred CCCCCCCHH---HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchH
Confidence 456777665 48999999999999998888 89999999999999999999999999 9999887655 1
Q ss_pred HhcccCCcEEEEeCC-----CCHHHHHHhhc--CCCeeEEEEeC----CCCCCCcccCHHHHHHHHHh--CCCEEEEECC
Q 009523 259 TVLPKMGITATVIDP-----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGT 325 (532)
Q Consensus 259 ~~l~~~Gv~v~~vd~-----~dle~Le~al~--~~~tklV~les----P~NptG~v~dl~~I~~la~~--~gi~lIvDet 325 (532)
..++..|+++++++. .|+++|+++++ + +||+|++++ |+||+|.+.|+++|+++|++ +|+++++|++
T Consensus 142 ~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~-~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 142 GSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE-SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp CCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCT-TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCC-CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 446678999999987 58999999998 5 799999999 99999999999999999999 9999999999
Q ss_pred CCCCC-cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH--hhhcCCCccH-HH-HHHHHHhHHHHHHH
Q 009523 326 FATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNP-NA-AYLIIRGMKTLHLR 400 (532)
Q Consensus 326 ~a~~~-~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G~~~~~-~~-a~l~l~~l~tl~~r 400 (532)
|+.+. ...+...|+|++++|+||++||+++..+|+++++++++++++.. ...+|..+++ +. +++++++++++..|
T Consensus 221 ~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r 300 (427)
T 3i16_A 221 YGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHI 300 (427)
T ss_dssp TTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHH
T ss_pred CccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHH
Confidence 99886 67888899999999999999999888899999999999998873 3334444444 44 78899999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC---
Q 009523 401 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG--- 477 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G--- 477 (532)
++++.+++..++++|++++. +| +|+ +++|+|++ +++|.+. +.+.+.+|++.|+.+....|+-
T Consensus 301 ~~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~~----------i~~i~l~-~~~~~~~f~~~l~~~~~~~s~~~p~ 365 (427)
T 3i16_A 301 SMEALKGAILCSRIMELAGF--EV-MPK-YDEKRSDI----------IQSIKFN-DKDKLIEFCKGIQTGSPIDSFVSCE 365 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CEEEECS-SHHHHHHHHHHHHHTCSSSTTSCCC
T ss_pred HHHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCccE----------EEEEEEC-CHHHHHHHHHHHhhcCcccccccCc
Confidence 99999999999999999976 67 888 78888765 8999996 5688899999998776544432
Q ss_pred -----CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 478 -----GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 478 -----~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
|++.-+...+.+--..-+.|.-.+..+.+.++...-|-.+.+...-.+.+|++++
T Consensus 366 ~~~~~gy~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3i16_A 366 PWDMPGYTDQVIMAAGAFIQGSSIELSADAPIREPYIAYLQGGLTFDHAKIGILIALSRI 425 (427)
T ss_dssp CBCC---CCCEEEEECCSSTTCSSSSEEEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCceeeccCcCCCCccccccCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHHH
Confidence 1111111100000000011111122345678888888888888888888888764
No 19
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.5e-34 Score=305.83 Aligned_cols=324 Identities=19% Similarity=0.233 Sum_probs=257.1
Q ss_pred cCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHH-------
Q 009523 190 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------- 258 (532)
Q Consensus 190 ~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~---~sSG~~Ai~~al~all~~Gd~VIv~~-~~y~~t~~~~~------- 258 (532)
..+|.|+|+ ..++||+++|+++|++.+++ ++||++|+..++.++++|||+|++++ +.|+++..++.
T Consensus 66 ~~gy~Y~~~---g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 142 (427)
T 3hvy_A 66 SSGYGYNDI---GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKV 142 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCS
T ss_pred CcCCCCCch---hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhh
Confidence 356777776 48999999999999998888 89999999999999999999999999 99998775551
Q ss_pred HhcccCCcEEEEeCC----CCHHHHHHhhc--CCCeeEEEEeC----CCCCCCcccCHHHHHHHHHh--CCCEEEEECCC
Q 009523 259 TVLPKMGITATVIDP----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTF 326 (532)
Q Consensus 259 ~~l~~~Gv~v~~vd~----~dle~Le~al~--~~~tklV~les----P~NptG~v~dl~~I~~la~~--~gi~lIvDet~ 326 (532)
..++..|++++.++. .|+++|+++++ + +||+|++++ |+||+|.+.|+++|+++|++ +|+++++|+++
T Consensus 143 ~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~-~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~ 221 (427)
T 3hvy_A 143 GSLREYGVKYKMVDLKDGKVDINTVKEELKKDD-SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCY 221 (427)
T ss_dssp CCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCT-TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred hHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCC-CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 346678999999987 79999999998 5 799999999 99999999999999999999 89999999999
Q ss_pred CCCC-cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCCcc--HHHHHHHHHhHHHHHHHH
Q 009523 327 ATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALN--PNAAYLIIRGMKTLHLRV 401 (532)
Q Consensus 327 a~~~-~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~--~~~a~l~l~~l~tl~~r~ 401 (532)
+.+. ...+...|+|++++|+||+++|+++.+||+++++++++++++... ...|...+ ...+++++++++++..|+
T Consensus 222 ~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~ 301 (427)
T 3hvy_A 222 GEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVT 301 (427)
T ss_dssp CTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHH
Confidence 9886 578888999999999999999998888999999999999988743 22332222 233788899999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec------
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS------ 475 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs------ 475 (532)
+++.+|+..++++|++++. +| +|+ +++|+|++ +++|.+. +.+.+.+|++.|+.+....|
T Consensus 302 ~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~l----------i~~~~l~-~~~~~~~f~~~l~~~~~~~s~~~p~~ 366 (427)
T 3hvy_A 302 IEAVKGAVFCARIMELAGF--DV-LPK-YNDKRTDI----------IQAIKFN-DEKKLIDFIKGIQTASPVDSFVQCEA 366 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------EEEEECS-SHHHHHHHHHHHHHTCSSSTTCCC--
T ss_pred HHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCceE----------EEEEeCC-CHHHHHHHHHHhccccccccccCCCC
Confidence 9999999999999999975 56 788 77777654 8999996 56888999999987654333
Q ss_pred --CCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 476 --FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 476 --~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
+.|+++.+...+.+--..-+.|.-.+-.+.+.++...-|-.+.+...-.+.+|++++
T Consensus 367 ~~~~Gy~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3hvy_A 367 WDMPGYEDKVIMAAGTFVQGASIELSADAPIREPYIGYLQGGLTFDHAKLGVLIALSKL 425 (427)
T ss_dssp --------CEEEECCCSSTTCSSSSEEEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCCCCcCceeeeccccCCCccccccCCCCCCCCeeEEEcCCccHHHHHHHHHHHHHHh
Confidence 234443332211110001111111222355778889999889998888999988764
No 20
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=100.00 E-value=7.7e-34 Score=300.63 Aligned_cols=320 Identities=17% Similarity=0.191 Sum_probs=253.2
Q ss_pred cCCCCCCCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHH------H
Q 009523 190 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------T 259 (532)
Q Consensus 190 ~~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~---~sSG~~Ai~~al~all~~Gd~VIv~~-~~y~~t~~~~~------~ 259 (532)
..+|.|+|. ..+.||+++|+++|++.+++ ++||++|+..++.+++++||+|++++ +.|.++...+. .
T Consensus 51 ~~~~~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~ 127 (409)
T 3jzl_A 51 STGYGYDDE---GRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQG 127 (409)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSS
T ss_pred CcCCCCChh---HHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhh
Confidence 456777664 58899999999999998888 89999999999999999999999998 99998765542 3
Q ss_pred hcccCCcEEEEeCC-----CCHHHHHHhhcCCCeeEEEEeC----CCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCC
Q 009523 260 VLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFAT 328 (532)
Q Consensus 260 ~l~~~Gv~v~~vd~-----~dle~Le~al~~~~tklV~les----P~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~ 328 (532)
.++..|+++++++. .|+++|++++++ +|++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+.
T Consensus 128 ~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 128 SLKDFHIGYSSVPLLENGDVDFPRIAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp CTGGGTCEEEECCCCTTSCCCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred HHHHcCCEEEEeCCCCCCCcCHHHHHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 56778999999987 689999999987 799999999 99999999999999999999 9999999999998
Q ss_pred CC-cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhh------cCCCccHHHHHHHHHhHHHHHHHH
Q 009523 329 PL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV------LGGALNPNAAYLIIRGMKTLHLRV 401 (532)
Q Consensus 329 ~~-~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~------~G~~~~~~~a~l~l~~l~tl~~r~ 401 (532)
++ ..++...|+|++++|+||+++|+++.+||+++++++++++++..... .|..+. .+++++++++++..|+
T Consensus 207 ~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~--~~~~~l~gl~~~~~r~ 284 (409)
T 3jzl_A 207 FVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLY--SLLEMYQGFFLAPHVT 284 (409)
T ss_dssp TTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHHHHHHHHHHH
T ss_pred ccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHH--HHHHHHHHHhhHHHHH
Confidence 76 56788899999999999999999888899999999999998764321 222222 2466789999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC-----
Q 009523 402 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF----- 476 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~----- 476 (532)
+++.+++..++++|++++. +| +|+ +++|+|++ +++|.++ +.+.+.+|++.|+.+....|+
T Consensus 285 ~~~~~~a~~la~~L~~~g~--~v-~p~-~~~~~~~~----------i~~i~l~-~~~~~~~~~~~L~~~~~~~s~~~p~~ 349 (409)
T 3jzl_A 285 AQAIKGARFTAAMLAEFGV--EA-DPV-WDAPRTDL----------IQSVSFH-NKEKMVAFAQAIQAASPVNAHVLPIG 349 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CCEEECS-CHHHHHHHHHHHHHTSSSSTTSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCC--cc-cCC-CCCCCccE----------EEEEEeC-CHHHHHHHHHHHHhcCcccccCCCCC
Confidence 9999999999999999975 56 787 77777654 8899996 568889999999876544332
Q ss_pred ---CCcccccccCccccc-cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 477 ---GGCESIVDQPAIMSY-WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 477 ---G~~~sl~~~pa~~s~-~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.|++.-+...+. ++ ..-+.|.-.+-.+.+.++...-|-.+.+...-.+.+|+++
T Consensus 350 ~~~~gy~~~~~~~~~-~f~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (409)
T 3jzl_A 350 AYMPGYEDDVIMAAG-TFIQGASLELTADGPIREPYQLYVQGGLTYEHIKIAVTRAIQK 407 (409)
T ss_dssp BCCTTCSSCEEEECC-CSSTTCSSSCEEEEESSTTTEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceeEecc-ccCCCcceeecCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHh
Confidence 122222111111 01 0001111112234567888888988888888888888875
No 21
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.5e-27 Score=249.69 Aligned_cols=303 Identities=14% Similarity=0.086 Sum_probs=216.1
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al---l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
|.|++...+..+++++++++++|.+ +++++++|++++.+++.++ +++||+|+++.++|+++...+....+..|.+
T Consensus 61 ~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 140 (406)
T 3cai_A 61 HPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAK 140 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCE
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCe
Confidence 4454445678899999999999975 5777778889999999887 7899999999999998766554444446888
Q ss_pred EEEeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCc
Q 009523 268 ATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGAD 340 (532)
Q Consensus 268 v~~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaD 340 (532)
+.+++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|
T Consensus 141 v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d 219 (406)
T 3cai_A 141 VKWAEVDIETGELPTWQWESLISK-STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDAD 219 (406)
T ss_dssp EEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCS
T ss_pred EEEEecCcccCCcCHHHHHHHhCC-CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCC
Confidence 8888765 89999999987 799999999999999999999999999999999999999875432 333346899
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh---------hcCCCccHHHHHHHHHhHHH---------------
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------VLGGALNPNAAYLIIRGMKT--------------- 396 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------~~G~~~~~~~a~l~l~~l~t--------------- 396 (532)
+++.|+||++|+. +||++++++++++.++.... ...++.++.....+...++.
T Consensus 220 ~~~~s~~K~~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 296 (406)
T 3cai_A 220 VVTVNAHAWGGPP---IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRER 296 (406)
T ss_dssp EEEEEGGGGTSCS---CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHH
T ss_pred EEEeehhhhcCCC---cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhh
Confidence 9999999988743 24399999888776654321 11233444433222222322
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009523 397 ----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 472 (532)
Q Consensus 397 ----l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i 472 (532)
+....++..++++++.+.|++.|++. +..|. ...+++++|.+++ .....+.+.|...++
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~--~~~~~~~~~L~~~gi 359 (406)
T 3cai_A 297 LAVSMQSADAYLNRVFDYLMVSLRSLPLVM-LIGRP--------------EAQIPVVSFAVHK--VPADRVVQRLADNGI 359 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCTTEE-ECCCC--------------SSBCSEEEEEETT--BCHHHHHHHHHHTTE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCeE-EcCCc--------------cccCCEEEEEECC--cCHHHHHHHHHHCCc
Confidence 33444555677888888998877653 33221 0134589999874 223445555555577
Q ss_pred eecCCCcccccccCccccccCCCHHHHHhcCCC--CCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009523 473 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIM--DNLVRFSFGVEDFEDLKADVLQALHAI 532 (532)
Q Consensus 473 ~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~--~~~IRlSvG~ed~~dli~dL~~AL~~l 532 (532)
.++.|.... ....+|.. .+.||||++..+.++.++.+.++|+++
T Consensus 360 ~v~~g~~~~----------------~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 360 LAIANTGSR----------------VLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp ECEECCSCH----------------HHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred EEecCChHH----------------HHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 777664110 11123432 478999999887777788888887653
No 22
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.96 E-value=8e-27 Score=242.52 Aligned_cols=284 Identities=10% Similarity=0.098 Sum_probs=213.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+...+|+++|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+.. .+...|.++..++..|+++|
T Consensus 83 ~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l 158 (384)
T 1bs0_A 83 SVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLE----AASLSPSQLRRFAHNDVTHL 158 (384)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH----HHHTSSSEEEEECTTCHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHH----HHHHcCCCEEEeCCCCHHHH
Confidence 47889999999999999889999999999999999999999999999999987654 34456899999998899999
Q ss_pred HHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-------ccccccCCcEEEECCcccc
Q 009523 280 EAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALSLGADLVLHSATKFI 350 (532)
Q Consensus 280 e~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-------~~~l~~gaDivv~S~sK~l 350 (532)
++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......+.|+++.|+||++
T Consensus 159 ~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~ 238 (384)
T 1bs0_A 159 ARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF 238 (384)
T ss_dssp HHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT
T ss_pred HHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh
Confidence 9998763 389999999999999999999999999999999999999876531 1122345899999999999
Q ss_pred CCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHHHHhCCCceE
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKVKR 423 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl-----~~r~~~~~~~a~~la~~L~~~p~v~~ 423 (532)
++. ||++++++++++.++.... ..+...++..++.+...++.+ ....++..++++++.+.|+++ ++.
T Consensus 239 ~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~- 312 (384)
T 1bs0_A 239 GVS----GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT- 312 (384)
T ss_dssp SSC----CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-
T ss_pred hcc----CcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-
Confidence 954 4999999999888876432 223346666665555555443 345566667888888888876 332
Q ss_pred EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcC
Q 009523 424 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 503 (532)
Q Consensus 424 V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~g 503 (532)
+. | +.|+++++.++. ......+.+.|...++.+..|..... .
T Consensus 313 ~~-~----------------~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~--------------------~ 354 (384)
T 1bs0_A 313 LA-D----------------SCSAIQPLIVGD-NSRALQLAEKLRQQGCWVTAIRPPTV--------------------P 354 (384)
T ss_dssp EC-S----------------CCSSBCCEEEES-HHHHHHHHHHHHHTTEECCEECTTSS--------------------C
T ss_pred cc-C----------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCcEEEeecCCCC--------------------C
Confidence 21 2 135678888863 24456677776655777765532110 0
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 504 IMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 504 i~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..++.+||+++....++.++.+.++|++
T Consensus 355 ~~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 355 AGTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp TTCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 1257899999987666666777777654
No 23
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.96 E-value=2.3e-27 Score=248.56 Aligned_cols=305 Identities=16% Similarity=0.155 Sum_probs=215.4
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~al----l~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
+.|+....+...+++++|++++|. ++++++++|++|+.+++.++ +++||+|+++.++|+++...+....+..|
T Consensus 64 ~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g 143 (420)
T 1t3i_A 64 HQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTG 143 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcC
Confidence 334433356788999999999998 57888899999999999999 89999999999999997544444555678
Q ss_pred cEEEEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCC
Q 009523 266 ITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 339 (532)
Q Consensus 266 v~v~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~ga 339 (532)
+++..++. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++
T Consensus 144 ~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~ 222 (420)
T 1t3i_A 144 AVLKFVQLDEQESFDLEHFKTLLSE-KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDC 222 (420)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTC
T ss_pred cEEEEeccCCCCCcCHHHHHHhhCC-CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCC
Confidence 88888875 479999999987 799999999999999999999999999999999999999876533 23445689
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhh--------------------cCCCccHHHHHHHHH-hHHH--
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------LGGALNPNAAYLIIR-GMKT-- 396 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------------------~G~~~~~~~a~l~l~-~l~t-- 396 (532)
|+++.|+||.+|+.| +|++++++++++.++..... +....++..+++++. .++.
T Consensus 223 di~~~s~sK~~~~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 223 DWLVASGHKMCAPTG---IGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp SEEEEEGGGTTSCTT---CEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhhcCCCc---eEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 999999999888765 78999999888877543211 111122333333222 3333
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009523 397 ---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 473 (532)
Q Consensus 397 ---l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~ 473 (532)
+....++..++++++.+.|++.+++. +..|... . .+.|+++.|.+++ .....+.+.|...++.
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~---~--------~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~ 365 (420)
T 1t3i_A 300 DLGMENIHNYEVELTHYLWQGLGQIPQLR-LYGPNPK---H--------GDRAALASFNVAG--LHASDVATMVDQDGIA 365 (420)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTCTTEE-EESCCGG---G--------SCBCSEEEEEETT--BCHHHHHHHHHTTTEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeCCCcc---c--------cccCCEEEEEECC--CCHHHHHHHHHHCCeE
Confidence 33455666678888999998877664 3333200 0 0247789998874 2234566666666888
Q ss_pred ecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 474 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 474 vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+..|..+.. | ....+|. ++.||||++....++.++.+.++|+
T Consensus 366 v~~~~~~~~---~-----------~~~~~g~-~~~iRis~~~~~~~~~i~~~~~~l~ 407 (420)
T 1t3i_A 366 IRSGHHCTQ---P-----------LHRLFDA-SGSARASLYFYNTKEEIDLFLQSLQ 407 (420)
T ss_dssp CBCSCTTCH---H-----------HHHHTTC-CCCEEEECCTTCCHHHHHHHHHHHH
T ss_pred Eeeccccch---H-----------HHHhcCC-CCeEEEecCCCCCHHHHHHHHHHHH
Confidence 777643211 0 0112232 5789999997554444444444443
No 24
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=3.1e-27 Score=248.62 Aligned_cols=305 Identities=18% Similarity=0.205 Sum_probs=212.7
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhcc----CCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~----~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
+++...+..+++++++++++|.+ +++++++|++|+.+++.++.+ +||+|+++.++|+++...+.. +...|+++
T Consensus 62 ~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~ 140 (423)
T 3lvm_A 62 FGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEV 140 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-HHHTTCEE
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-HHHcCCEE
Confidence 33344566789999999999986 788889999999999998874 899999999999987665533 36678999
Q ss_pred EEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEE
Q 009523 269 TVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLV 342 (532)
Q Consensus 269 ~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDiv 342 (532)
..++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|++
T Consensus 141 ~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~ 219 (423)
T 3lvm_A 141 TYLAPQRNGIIDLKELEAAMRD-DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLM 219 (423)
T ss_dssp EEECCCTTSCCCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEE
T ss_pred EEeccCCCCccCHHHHHHhcCC-CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEE
Confidence 888765 89999999987 799999999999999999999999999999999999999876533 44455689999
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-------hcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 411 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-------~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~l 411 (532)
+.|+||.+|+.+ .|+++++++.++.+..... ...++.+......+...++. +....++..++++.+
T Consensus 220 ~~s~sK~~g~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 296 (423)
T 3lvm_A 220 SFSGHKIYGPKG---IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRL 296 (423)
T ss_dssp EEESTTTTSCSS---CEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechHHhcCCCC---eEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888765 6788887765554433211 11233344443333333332 344455666778888
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
.+.|++.|++..+..+. .+.++++.|.+++ .....+.+.|.. +.+..|..++...
T Consensus 297 ~~~L~~~~~~~~~~~~~--------------~~~~~~~~~~~~~--~~~~~l~~~l~~--i~v~~g~~~~~~~------- 351 (423)
T 3lvm_A 297 WNGIKDIEEVYLNGDLE--------------HGAPNILNVSFNY--VEGESLIMALKD--LAVSSGSACTSAS------- 351 (423)
T ss_dssp HHHHTTSTTEEEESCST--------------TBCTTEEEEEETT--SCHHHHHHHTTT--EECBCCCC------------
T ss_pred HHHHhcCCCEEEeCCcc--------------ccCCCeEEEEeCC--CCHHHHHHHHhh--heeccCccccCCC-------
Confidence 88888777764332221 1245688888864 234566666665 7777775543211
Q ss_pred cCCCHHHHHhcCCC----CCeEEEEecCCC----HHHHHHHHHHHHh
Q 009523 492 WDLSQSERLKYGIM----DNLVRFSFGVED----FEDLKADVLQALH 530 (532)
Q Consensus 492 ~~~~~~~~~~~gi~----~~~IRlSvG~ed----~~dli~dL~~AL~ 530 (532)
..+......+|+. ++.|||+++... .+.+++.|.++++
T Consensus 352 -~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~ 397 (423)
T 3lvm_A 352 -LEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIG 397 (423)
T ss_dssp -CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred -ccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 0112233445554 489999999644 4445555555543
No 25
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.96 E-value=2.4e-27 Score=244.97 Aligned_cols=285 Identities=15% Similarity=0.226 Sum_probs=209.6
Q ss_pred CCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+.+|+++...+|++++++++|. ++++++++|++|+.+++.+++++||+|+++.++|.+.... ++..|.++..+
T Consensus 61 ~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v 136 (367)
T 3euc_A 61 LNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMS----AQFAGLEFVGV 136 (367)
T ss_dssp TTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHH----HHTTTCEEEEE
T ss_pred hhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEe
Confidence 4456667789999999999997 4566667777999999999999999999999999986543 45568888887
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhC--CCEEEEECCCCCCCcc----ccccc
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLNQ----KALSL 337 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~--gi~lIvDet~a~~~~~----~~l~~ 337 (532)
+. .|+++|+++++++++++|++++|+||||.+.+ +++|+++|++| |+++|+|++|+..... .....
T Consensus 137 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 216 (367)
T 3euc_A 137 PLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDF 216 (367)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTC
T ss_pred cCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhC
Confidence 63 38999999997646999999999999999976 66777889999 9999999998753211 11234
Q ss_pred CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHH
Q 009523 338 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 338 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~ 414 (532)
+.++++.|+||+ +.+| ...|++++++++++.++.....+ ..++..++.+...++ .+..+.++..++++++.+.
T Consensus 217 ~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 292 (367)
T 3euc_A 217 GNLLVMRTVSKL-GLAG-IRLGYVAGDPQWLEQLDKVRPPY--NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEG 292 (367)
T ss_dssp TTEEEEEECCCT-TSCS-CCEEEEEECHHHHHHHGGGCCSS--CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecchhh-cccc-cCceeeeeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 567999999999 5554 46899999999988887655433 345665555554443 3556666777888899999
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 494 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~ 494 (532)
|+++|++. + +|. .|.++++.++ + ...+.+.|...++.++.|+.+.
T Consensus 293 l~~~~g~~-~-~~~----------------~~~~~~~~~~-~---~~~l~~~l~~~gi~v~~~~~~~------------- 337 (367)
T 3euc_A 293 MAAHGGVT-V-FPS----------------AANFLLARVP-D---AAQTFDRLLARKVLIKNVSKMH------------- 337 (367)
T ss_dssp HHTSTTCE-E-CCC----------------SSSEEEEECS-C---HHHHHHHHHTTTEECEECGGGC-------------
T ss_pred HHhCCCcE-E-CCC----------------CCeEEEEECC-C---HHHHHHHHHHCCeEEEECCccC-------------
Confidence 99887775 3 332 3668888886 3 3455666666688877765421
Q ss_pred CHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009523 495 SQSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 530 (532)
Q Consensus 495 ~~~~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL~ 530 (532)
+..++.||||++. ++.+.+++.|+++++
T Consensus 338 --------~~~~~~iRis~~~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 338 --------PLLANCLRVTVSTPEENAQFLEAFAASLQ 366 (367)
T ss_dssp --------GGGTTEEEEECCCHHHHHHHHHHHHHHTC
T ss_pred --------CCCCCEEEEecCCHHHHHHHHHHHHHHhc
Confidence 0125799999994 334555666665543
No 26
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=1.1e-27 Score=247.04 Aligned_cols=307 Identities=14% Similarity=0.128 Sum_probs=209.1
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all----~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
.|.|++...+..+++++++++++|.+ +++++++|++|+.+++.++. ++||+|+++++.|+++...+. .+...|
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g 112 (382)
T 4hvk_A 34 VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQG 112 (382)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcC
Confidence 35556666788889999999999975 46777778899999999987 999999999999998776553 345679
Q ss_pred cEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCC
Q 009523 266 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 339 (532)
Q Consensus 266 v~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~ga 339 (532)
+++..++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+ +|+|++++.+.. .+....++
T Consensus 113 ~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~ 190 (382)
T 4hvk_A 113 FEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGA 190 (382)
T ss_dssp CEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTC
T ss_pred CEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCC
Confidence 999988754 89999999987 79999999999999999999999999999999 999999876533 33334689
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-------hhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 408 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a 408 (532)
|+++.|+||++|+.| .|+++.+++. .++... ....++.+....+.+..+++ .+....++..+++
T Consensus 191 d~~~~s~~K~~g~~g---~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 265 (382)
T 4hvk_A 191 DMLTISSNDIYGPKG---VGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLR 265 (382)
T ss_dssp SEEEEESGGGTSCTT---CEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeHHHhcCCCc---eEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999887665 4555554432 111111 11123334444443333333 2344455666777
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
+++.+.|++.|++. +..|.- .+.+++++|.+++. ....+.+.|...++.++.|..++....
T Consensus 266 ~~l~~~L~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~--- 326 (382)
T 4hvk_A 266 DRIIDNVLKIEESY-LNGHPE-------------KRLPNNVNVRFSYI--EGESIVLSLDMAGIQASTGSACSSKTL--- 326 (382)
T ss_dssp HHHHHHHTTSTTEE-ECSCSS-------------SBCTTEEEEEETTC--CHHHHHHHHHHTTCBCBCC-----------
T ss_pred HHHHHHHhcCCCeE-EeCCcc-------------ccCCCEEEEEECCC--CHHHHHHHHHHCCEEEeeCCccCCCCC---
Confidence 88888888777653 322210 12356889988752 234556666666888888865432111
Q ss_pred ccccCCCHHHHHhcCCC----CCeEEEEecCCC----HHHHHHHHHHHHh
Q 009523 489 MSYWDLSQSERLKYGIM----DNLVRFSFGVED----FEDLKADVLQALH 530 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~----~~~IRlSvG~ed----~~dli~dL~~AL~ 530 (532)
.+......+|++ ++.|||+++... .+++++.|.++++
T Consensus 327 -----~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~ 371 (382)
T 4hvk_A 327 -----QPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp -----CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----cchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 112223445554 589999999644 4455555555544
No 27
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.96 E-value=3e-27 Score=244.09 Aligned_cols=282 Identities=13% Similarity=0.188 Sum_probs=210.9
Q ss_pred CCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.+|+++...+|++++|+++|. ++++++++|++|+..++.+++++||+|+++.++|.+... .++..|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~ 134 (365)
T 3get_A 59 AHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEI----YAKQCGAKCYKTQ 134 (365)
T ss_dssp TTSCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHH----HHHHHTCEEEECS
T ss_pred hccCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHH----HHHHcCCEEEEEe
Confidence 4455666568999999999995 578888888999999999999999999999999987653 3455688998888
Q ss_pred C-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHH--hCCCEEEEECCCCCCC---c----cccc---
Q 009523 273 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFATPL---N----QKAL--- 335 (532)
Q Consensus 273 ~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~--~~gi~lIvDet~a~~~---~----~~~l--- 335 (532)
. .|+++|++++++ ++++|++++|+||||.+.|++++.++++ ++|+++|+|++|+... . ....
T Consensus 135 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 213 (365)
T 3get_A 135 SITHNLDEFKKLYETHKD-EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELI 213 (365)
T ss_dssp SSSCCHHHHHHHHHHTTT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHH
T ss_pred cCCCCCCCHHHHHHHhCC-CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHh
Confidence 6 468899999986 7999999999999999999999888888 6799999999976322 1 1121
Q ss_pred -ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHH
Q 009523 336 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRM 411 (532)
Q Consensus 336 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~l 411 (532)
..+.++++.|+||.+|.+| ...|++++++++++.++.....++ .++..++.+...+ +.+..+.++..++++++
T Consensus 214 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 290 (365)
T 3get_A 214 KEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYKLRAPFN--VSNLALKAAVAAMDDDEFTEKTLENNFSQMELY 290 (365)
T ss_dssp HHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHHHSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHHhcCCCC--cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 2367799999999998665 357888889999998887665443 4555555544444 34556666777888889
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
.+.|+++ ++. + +|. .|+++++.+++. ....+.+.|...++.++.|..+
T Consensus 291 ~~~l~~~-g~~-~-~~~----------------~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~----------- 338 (365)
T 3get_A 291 KEFAKKH-NIK-I-IDS----------------YTNFITYFFDEK--NSTDLSEKLLKKGIIIRNLKSY----------- 338 (365)
T ss_dssp HHHHHHT-TCE-E-CCC----------------SSSEEEEECSSS--CHHHHHHHHHTTTEECEECGGG-----------
T ss_pred HHHHHhC-CCE-E-CCC----------------CCeEEEEECCCC--CHHHHHHHHHHCCEEEEECccC-----------
Confidence 9999887 443 2 221 356789998753 3456666666668877766431
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009523 492 WDLSQSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 529 (532)
Q Consensus 492 ~~~~~~~~~~~gi~~~~IRlSvG~-ed~~dli~dL~~AL 529 (532)
+ ++.+|||++. ++.+.+++.|++++
T Consensus 339 -----------~--~~~iRis~~~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 339 -----------G--LNAIRITIGTSYENEKFFTEFDKIL 364 (365)
T ss_dssp -----------T--CSEEEEECCCHHHHHHHHHHHHHHH
T ss_pred -----------C--CCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 2 5789999994 34555666666554
No 28
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.96 E-value=9.3e-27 Score=240.19 Aligned_cols=281 Identities=15% Similarity=0.184 Sum_probs=206.6
Q ss_pred CCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.+|+++...++++++++++|. ++++++++|++|+..++.+++++||+|+++.++|.+... .++..|.++..++
T Consensus 61 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~ 136 (363)
T 3ffh_A 61 TEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQ----NALIEGAEVREIP 136 (363)
T ss_dssp CCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHH----HHHHHTCEEEEEE
T ss_pred hhcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHH----HHHHcCCEEEEec
Confidence 4566777889999999999996 568888888999999999999999999999999987543 3455688888887
Q ss_pred CC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCCc------cc-ccccC
Q 009523 273 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN------QK-ALSLG 338 (532)
Q Consensus 273 ~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~~------~~-~l~~g 338 (532)
.+ |+++|++++++ ++++|++++|+||||.+.|++++.++++.+ |+++|+|++|+.... .. ....+
T Consensus 137 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (363)
T 3ffh_A 137 LLQDGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYK 215 (363)
T ss_dssp CCTTSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCT
T ss_pred CCCCCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCC
Confidence 65 89999999987 799999999999999999999999999887 999999999873221 11 11234
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L 415 (532)
.++++.|+||.+|.+| ...|++++++++++.++..... ...++..++.+...+ +.+..+.++..++++++.+.|
T Consensus 216 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 292 (363)
T 3ffh_A 216 NLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNIVRPP--FNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFA 292 (363)
T ss_dssp TEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHHTCCS--CCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhhcCch-hceeeeecCHHHHHHHHHhCCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999998665 3568888899999988876543 345666666655555 445566667778888899999
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++++++. + +|. .|+++++.++.+ ...+.+.|...++.++.|..+
T Consensus 293 ~~~~g~~-~-~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~--------------- 336 (363)
T 3ffh_A 293 KRFEKVK-L-YPA----------------NGNFVLIDLGIE---AGTIFSYLEKNGYITRSGAAL--------------- 336 (363)
T ss_dssp HHCTTCE-E-CCC----------------CSSEEEEECSSC---HHHHHHHHHHTTEECEETTTT---------------
T ss_pred hhCCCce-E-CCC----------------CCeEEEEECCCC---HHHHHHHHHHCCeEEEeCccC---------------
Confidence 8876654 2 222 356889998753 344555555457777766432
Q ss_pred HHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
|. ++.||||++. ++.++.+.++|+
T Consensus 337 -------~~-~~~iRis~~~---~~~i~~~~~~l~ 360 (363)
T 3ffh_A 337 -------GF-PTAVRITIGK---EEDNSAVIALLE 360 (363)
T ss_dssp -------TC-TTEEEEECCC---HHHHHHHHHHHH
T ss_pred -------CC-CCeEEEECCC---HHHHHHHHHHHH
Confidence 11 5799999993 233344444443
No 29
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.96 E-value=6.4e-27 Score=244.69 Aligned_cols=284 Identities=15% Similarity=0.121 Sum_probs=212.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+...+|+++|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+++.. .++..|+++..++..|+++|
T Consensus 89 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l 164 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIID----GVRLCKAKRYRYANNDMQEL 164 (401)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHTSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHH----HHHHcCCceEEECCCCHHHH
Confidence 68889999999999999888999999999999999999999999999999987653 34567899999988899999
Q ss_pred HHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-c--------cccccCCcEEEEC
Q 009523 280 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-Q--------KALSLGADLVLHS 345 (532)
Q Consensus 280 e~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~--------~~l~~gaDivv~S 345 (532)
++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.++. . ..+..+.|+++.|
T Consensus 165 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s 244 (401)
T 1fc4_A 165 EARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT 244 (401)
T ss_dssp HHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEec
Confidence 9988641 589999999999999999999999999999999999999863321 1 1112357999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCCC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+||++++.. ||++++++++++.++.... .++...++..++.+...++.+. ...++..++++++.+.|+++ +
T Consensus 245 ~sK~~~~~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 320 (401)
T 1fc4_A 245 LGKALGGAS---GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-G 320 (401)
T ss_dssp SSSTTCSSS---CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred chhhccCCC---CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 999995443 5999999999988876542 2355667777777776776653 45666778888888888876 3
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+. + +| +.|+++++.+++ ......+.+.|...++.+..|..+.. +
T Consensus 321 ~~-~-~~----------------~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~------------~----- 364 (401)
T 1fc4_A 321 FT-L-AG----------------ADHAIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVV------------P----- 364 (401)
T ss_dssp CC-B-CC----------------SSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSS------------C-----
T ss_pred Cc-c-cC----------------CCCCEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCC------------C-----
Confidence 32 1 12 147799999974 23455666666555777665533210 0
Q ss_pred hcCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009523 501 KYGIMDNLVRFSFGVEDF----EDLKADVLQALH 530 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~ed~----~dli~dL~~AL~ 530 (532)
-.++.+||+++.... +.+++.|.++++
T Consensus 365 ---~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 395 (401)
T 1fc4_A 365 ---KGQARIRTQMSAAHTPEQITRAVEAFTRIGK 395 (401)
T ss_dssp ---TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 024689999996433 444455555544
No 30
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.96 E-value=4.2e-27 Score=243.85 Aligned_cols=285 Identities=13% Similarity=0.154 Sum_probs=205.6
Q ss_pred chhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 200 NPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.+...+|+++++++++. +++++++||++|+..++.+++++||+|+++.+.|+++... +...|.++..++.+
T Consensus 62 ~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~ 137 (375)
T 3op7_A 62 IEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDI----PKSLGAEVDLWQIEEE 137 (375)
T ss_dssp TTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHH----HHHTTCEEEEEEEEGG
T ss_pred CCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEecccc
Confidence 45567899999998742 6788888889999999999999999999999999986543 44567777777632
Q ss_pred -----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc---c-ccccCCcEE
Q 009523 275 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K-ALSLGADLV 342 (532)
Q Consensus 275 -----dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~---~-~l~~gaDiv 342 (532)
|+++|++++++ ++++|++++|+||||.+.| +++|.++|++||+++|+|++|+..... . ....+.+++
T Consensus 138 ~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~ 216 (375)
T 3op7_A 138 NGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIA 216 (375)
T ss_dssp GTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEE
T ss_pred CCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEE
Confidence 89999999987 7999999999999999999 999999999999999999998763221 1 112356799
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHhC
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL----RVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~----r~~~~~~~a~~la~~L~~~ 418 (532)
+.|+||.++.+| ..+|++++++++++.++......+...++..++++...++.... +.++..++++.+.+.|+++
T Consensus 217 ~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 295 (375)
T 3op7_A 217 VNSLSKTYSLPG-IRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEE 295 (375)
T ss_dssp EEESSSSSSCGG-GCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeEChhhcCCcc-cceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999998555 45789999999999988766655555667766666555554332 2333457788888889887
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccccccCccccccCCCHH
Q 009523 419 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 419 p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
+.+..+ .|. .|.++++.++.+ .....+...+ +..++.+..|..+.
T Consensus 296 ~~~~~~-~~~----------------~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~---------------- 341 (375)
T 3op7_A 296 PLVSYI-RPA----------------VVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFE---------------- 341 (375)
T ss_dssp TTEEEC-CCS----------------SSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGT----------------
T ss_pred CCceEe-cCC----------------CeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhC----------------
Confidence 776432 221 234556666532 1233444443 34466665553321
Q ss_pred HHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009523 498 ERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 531 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~~ 531 (532)
.++.+||+++.. +.++.++.|.+++++
T Consensus 342 -------~~~~iRi~~~~~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 342 -------RDGYVRLGFACEQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp -------CTTEEEECCCSCHHHHHHHHHHHHHHHGG
T ss_pred -------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 157899999975 345556666666653
No 31
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.96 E-value=2.1e-27 Score=243.23 Aligned_cols=284 Identities=18% Similarity=0.178 Sum_probs=199.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----C
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----~ 274 (532)
.++...+||++||+++|.++.++++||++|+.+++.+++++||+|++++++|.+++... ......|+++..++. .
T Consensus 36 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 114 (347)
T 1jg8_A 36 EDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPVPGKNGAM 114 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEECEETTEE
T ss_pred CChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhcccc-chhhccCeEEEEecCCCCcc
Confidence 57889999999999999998999999999999999999999999999999997654211 123445777777621 2
Q ss_pred CHHHHHHhhcCC-----CeeEEEEeCCCCCC-CcccCH---HHHHHHHHhCCCEEEEECCCCC------CCcccccccCC
Q 009523 275 DMEGLEAALNNN-----NVSLFFTESPTNPF-LRCVDV---KLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGA 339 (532)
Q Consensus 275 dle~Le~al~~~-----~tklV~lesP~Npt-G~v~dl---~~I~~la~~~gi~lIvDet~a~------~~~~~~l~~ga 339 (532)
|+++|++++++. ++++|++++|+||| |.++|. ++|.++|+++|+++|+|+++.. +.....+..++
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 194 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA 194 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccc
Confidence 899999999751 59999999999999 999875 6888999999999999998531 12222333468
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCc--cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~ 417 (532)
|.++.|+||+++++ +||+++++++++++++..+..+++.. +...++++..+++....++++..++++++.+.|++
T Consensus 195 d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 271 (347)
T 1jg8_A 195 DSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKE 271 (347)
T ss_dssp SEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889999999865 46678889989888876655555433 44555555556665444556666778888888887
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 497 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~ 497 (532)
+ ++. +..+ ...++++++.++........|.+.|...++.++.+
T Consensus 272 ~-~~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~-------------------- 314 (347)
T 1jg8_A 272 I-GYS-VNPE---------------DVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAV-------------------- 314 (347)
T ss_dssp H-TCB-CCGG---------------GCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEE--------------------
T ss_pred c-Cce-eccC---------------CCcceEEEEEcccccCCHHHHHHHHHHCCCEEecC--------------------
Confidence 5 332 2111 01367899998731122445666665446555421
Q ss_pred HHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHh
Q 009523 498 ERLKYGIMDNLVRFSFGVED----FEDLKADVLQALH 530 (532)
Q Consensus 498 ~~~~~gi~~~~IRlSvG~ed----~~dli~dL~~AL~ 530 (532)
..+.|||+++... .+.+++.|.++++
T Consensus 315 -------~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 315 -------SDTEIRLVTHKDVSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp -------ETTEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 1357999997543 3444455555443
No 32
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.95 E-value=1.7e-26 Score=240.60 Aligned_cols=286 Identities=16% Similarity=0.147 Sum_probs=212.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
..+...++++++++++|.++.+++++|++|+..++.+++++||+|+++.+.|+++.. .++..|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~ 161 (399)
T 3tqx_A 86 TQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIID----GIRLCKAQRYRYKNNAMGD 161 (399)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHSCCSEEEEECTTCTTH
T ss_pred CchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHH----HHHHcCCceeEeCCCCHHH
Confidence 457789999999999999999999999999999999999999999999999988553 4556788999999889999
Q ss_pred HHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-c------cccc--cCCcEEEE
Q 009523 279 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-Q------KALS--LGADLVLH 344 (532)
Q Consensus 279 Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~------~~l~--~gaDivv~ 344 (532)
|++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.++. . .... .+.|+++.
T Consensus 162 l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~ 241 (399)
T 3tqx_A 162 LEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTG 241 (399)
T ss_dssp HHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEE
T ss_pred HHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEe
Confidence 99988652 599999999999999999999999999999999999999864331 1 1112 26799999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHHHHHhC
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl----~~r~~~~~~~a~~la~~L~~~ 418 (532)
|+||+++|. .||++++++++++.+..... .+++..++..++.+...++.+ ....++..++++++.+.|++.
T Consensus 242 s~sK~~~g~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 242 TLGKALGGA---SGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp ESSSSSCSS---CCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhcccC---ceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 999999943 36999999999988876432 234566776666555555544 444556667788888888775
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHH
Q 009523 419 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 498 (532)
Q Consensus 419 p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~ 498 (532)
++. +. + ..|+++++.++. ......+.+.|...++.+..+.. +..
T Consensus 319 -g~~-~~-~----------------~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~------~~~---------- 362 (399)
T 3tqx_A 319 -GFQ-LV-P----------------GNHPIIPVMLGD-AQLATNMADHLLQEGIYVVGFSY------PVV---------- 362 (399)
T ss_dssp -TCC-BC-C----------------CSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECT------TTS----------
T ss_pred -CCC-cC-C----------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCC------CCC----------
Confidence 221 11 1 146789999975 24556677766655766654321 100
Q ss_pred HHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009523 499 RLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 531 (532)
Q Consensus 499 ~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~~ 531 (532)
...++.+||+++.. +.+.+++.|.+++++
T Consensus 363 ----~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 363 ----PMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp ----CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 01246899999843 345556666666553
No 33
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.95 E-value=6.8e-27 Score=240.13 Aligned_cols=283 Identities=14% Similarity=0.174 Sum_probs=209.5
Q ss_pred CCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
..+|+++...+|++++|+++|. ++++++++|++|+..++.+++++||+|+++.++|++... .++..|.++..++
T Consensus 45 ~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~ 120 (354)
T 3ly1_A 45 ANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEH----FAKIAGMKVTKVK 120 (354)
T ss_dssp TTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEEC
T ss_pred CcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHH----HHHHcCCEEEEec
Confidence 4556788899999999999996 467777888899999999999999999999999998653 4456789999988
Q ss_pred CC-----CHHHHHHhhcC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEECCCCCCCcc----ccc----c
Q 009523 273 PA-----DMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----S 336 (532)
Q Consensus 273 ~~-----dle~Le~al~~-~~tklV~lesP~NptG~v~dl~~I~~la~~--~gi~lIvDet~a~~~~~----~~l----~ 336 (532)
.+ |+++|++++++ .++++|++++|+||||.+.|++++.++++. +|+++|+|++|+..... ... .
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 200 (354)
T 3ly1_A 121 MLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQ 200 (354)
T ss_dssp CCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHT
T ss_pred CCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhh
Confidence 76 89999999982 279999999999999999999888888877 99999999997643211 111 1
Q ss_pred c-CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHH
Q 009523 337 L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMA 412 (532)
Q Consensus 337 ~-gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la 412 (532)
. +.++++.|+||.+|.+| ...|++++++++++.++..... ...++..++.+...+ +.+..+.++..++++++.
T Consensus 201 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 201 GAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGRYVAG--EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILL 277 (354)
T ss_dssp TCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGGGTTC--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 66799999999997454 4578999999999888776554 345565555544444 335556666778888888
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccccc
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 492 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~ 492 (532)
+.|+++ ++. + +|. .|.++++.++++ ...+.+.|...++.++ |...
T Consensus 278 ~~l~~~-~~~-~-~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gi~v~-g~~~------------ 322 (354)
T 3ly1_A 278 KALEDL-KLP-Y-LPS----------------EGNFVFHQLVVP---LKDYQTHMADAGVLIG-RAFP------------ 322 (354)
T ss_dssp HHHHHH-TCC-B-CCC----------------CSSEEEEECSSC---HHHHHHHHHHTTEECC-CCCT------------
T ss_pred HHHHHC-CCe-E-CCC----------------CceEEEEECCCC---HHHHHHHHHHCCEEEe-ecCC------------
Confidence 888875 332 1 121 366889998753 3345555544577776 5331
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009523 493 DLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 530 (532)
Q Consensus 493 ~~~~~~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~AL~ 530 (532)
+ .++.||||++.+ +.+.+++.|.++++
T Consensus 323 ----------~-~~~~iRis~~~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 323 ----------P-ADNWCRISLGTPQEMQWVADTMREFRK 350 (354)
T ss_dssp ----------T-CTTEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred ----------C-CCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 0 257999999853 45666666766665
No 34
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=9.3e-27 Score=242.54 Aligned_cols=295 Identities=16% Similarity=0.173 Sum_probs=207.0
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 199 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~al----l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
..+...+++++|++++|. ++++++++|++|+.+++.++ +++||+|+++.++|+++...+....+..|.++..+
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 144 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI 144 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE
Confidence 456788999999999998 46777788889999999999 89999999999999987665555566678888888
Q ss_pred CCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEEC
Q 009523 272 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 345 (532)
Q Consensus 272 d~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S 345 (532)
+.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s 223 (406)
T 1kmj_A 145 PLNPDGTLQLETLPTLFDE-KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFS 223 (406)
T ss_dssp CBCTTSCBCGGGHHHHCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEE
T ss_pred ecCCCCCcCHHHHHHHhcc-CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEE
Confidence 753 78999999987 799999999999999999999999999999999999999876432 23334589999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhh---------------------hc-CCCccHHHHHHHHHhHHHH-----H
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VL-GGALNPNAAYLIIRGMKTL-----H 398 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~-G~~~~~~~a~l~l~~l~tl-----~ 398 (532)
+||.+|+.| .|++++++++++.++.... .+ .++.+......+...++.+ .
T Consensus 224 ~~K~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 300 (406)
T 1kmj_A 224 GHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN 300 (406)
T ss_dssp GGGTTSCTT---CEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHH
T ss_pred chhccCCCC---cEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 999997765 5899999988887654321 01 1122222222221333332 2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCC
Q 009523 399 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGG 478 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~ 478 (532)
...++..++++++.+.|++.|++. +..|. +.|+++.|.+++. ....+.+.|...++.+..|.
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~ 362 (406)
T 1kmj_A 301 NIAEYEQNLMHYALSQLESVPDLT-LYGPQ---------------NRLGVIAFNLGKH--HAYDVGSFLDNYGIAVRTGH 362 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEE-EESCT---------------TCCSEEEEEETTC--CHHHHHHHHHHTTEECEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-EecCC---------------CcCCEEEEEECCC--CHHHHHHHHhhCCcEEEecc
Confidence 344555577888888888877653 32221 0367888888641 23345555555577776654
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.++. .....+|. ++.||||++...+++.++.+.++|+
T Consensus 363 ~~~~--------------~~~~~~g~-~~~iRis~~~~~t~~~i~~~~~~l~ 399 (406)
T 1kmj_A 363 HCAM--------------PLMAYYNV-PAMCRASLAMYNTHEEVDRLVTGLQ 399 (406)
T ss_dssp TTCH--------------HHHHHTTC-SCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ccch--------------HHHHhcCC-CCeEEEEeecCCCHHHHHHHHHHHH
Confidence 3210 01112332 5799999998644444444444443
No 35
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.95 E-value=2.8e-27 Score=252.01 Aligned_cols=258 Identities=19% Similarity=0.237 Sum_probs=208.0
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHH------HhcccCCcE
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TVLPKMGIT 267 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~---~sSG~~Ai~~al~all~~Gd~VIv~~-~~y~~t~~~~~------~~l~~~Gv~ 267 (532)
|+++..+++++.+++++|.+..++ ++||++|+..++.+++++||+|++++ +.|+++...+. ..++..|++
T Consensus 62 y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~ 141 (431)
T 3ht4_A 62 YDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIG 141 (431)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCE
T ss_pred CChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCE
Confidence 445668999999999999987766 88999999999999999999999998 99998765442 345678999
Q ss_pred EEEeCC-----CCHHHHHHhhcCCCeeEEEEeC-CCCCC---CcccCHHHHHHHHHh--CCCEEEEECCCCCCC-ccccc
Q 009523 268 ATVIDP-----ADMEGLEAALNNNNVSLFFTES-PTNPF---LRCVDVKLVSDLCHK--KGAIVCIDGTFATPL-NQKAL 335 (532)
Q Consensus 268 v~~vd~-----~dle~Le~al~~~~tklV~les-P~Npt---G~v~dl~~I~~la~~--~gi~lIvDet~a~~~-~~~~l 335 (532)
+++++. .|+++|++++++ ++++|++++ |+||+ |.+.|+++|+++|++ +|+++|+|++|+.+. ..++.
T Consensus 142 ~~~v~~~~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 142 YNAVPLTEGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EEECCBCTTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred EEEeCCCCCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 999987 389999999987 799999995 55554 555678899999999 999999999998875 36778
Q ss_pred ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccH--HHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009523 336 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRM 411 (532)
Q Consensus 336 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~--~~a~l~l~~l~tl~~r~~~~~~~a~~l 411 (532)
..|+|+++.|++|++||+.+..||++++++++++.++..... .|...++ ..+++++++++++..+++++.+++..+
T Consensus 221 ~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l 300 (431)
T 3ht4_A 221 HVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT 300 (431)
T ss_dssp GTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHH
Confidence 889999999999999997767789999999999988764432 2322222 235667889999999999999999999
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 471 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~ 471 (532)
+++|++++. .+ +|. ++++. .+-+++|.++ +.+.+.+|++.|+.+.
T Consensus 301 ~~~L~~~g~--~v-~p~-~~~~~----------~~li~~i~l~-~~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 301 AAFLEKLGM--NT-SPA-WNAPR----------TDLIQSVQFD-DKDRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHHHHTC--CE-ESC-TTSCC----------SSSCCEEECC-CHHHHHHHHHHHHHTS
T ss_pred HHHHHhCcC--Ee-cCC-CCCCC----------ccEEEEEEeC-CHHHHHHHHHHHHhcC
Confidence 999998764 34 565 44443 3448899986 4577889999887654
No 36
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.95 E-value=1.7e-26 Score=239.88 Aligned_cols=297 Identities=17% Similarity=0.135 Sum_probs=207.7
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~g----a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
.+.|+....+..+++++.+++.+| .++++++++|++|+.+++.+++++||+|+++.++|++... .+...|.+
T Consensus 57 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~ 132 (391)
T 3dzz_A 57 AFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYS----VIEGNGRR 132 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHH----HHHHTTCE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHH----HHHHcCCE
Confidence 456666656667777777777777 2567778888999999999999999999999999998654 34456888
Q ss_pred EEEeCC--------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcc---cCHHHHHHHHHhCCCEEEEECCCCCCCc-----
Q 009523 268 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----- 331 (532)
Q Consensus 268 v~~vd~--------~dle~Le~al~~~~tklV~lesP~NptG~v---~dl~~I~~la~~~gi~lIvDet~a~~~~----- 331 (532)
+..++. .|+++|++++++.++++|++++|+||||.+ .++++|+++|+++|+++|+|++|+....
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 212 (391)
T 3dzz_A 133 VISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDI 212 (391)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred EEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCc
Confidence 888765 589999999984479999999999999999 4688999999999999999999874321
Q ss_pred ccccccC---Cc--EEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcC-CCccHHHHHHHHHhHHH----HHHH
Q 009523 332 QKALSLG---AD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGMKT----LHLR 400 (532)
Q Consensus 332 ~~~l~~g---aD--ivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G-~~~~~~~a~l~l~~l~t----l~~r 400 (532)
......+ .| +++.|+||.+|.+| ...|+++++ +++++.++......+ ...++..++.+...++. +..+
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 291 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLREL 291 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHH
T ss_pred eehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 1122222 45 99999999997554 357888886 888888876644332 23444444444444433 4555
Q ss_pred HHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCC
Q 009523 401 VQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGG 478 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~ 478 (532)
.++..++++++.+.|++ .|++. +..|. .+.++++.++........+.+.| +..++.+..|.
T Consensus 292 ~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 354 (391)
T 3dzz_A 292 KQVLRDNFAYAREFLAKEVPEVK-VLDSN----------------ASYLAWVDISALGMNAEDFCKYLREKTGLIISAGN 354 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSE-ECCCC----------------BSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESG
T ss_pred HHHHHHHHHHHHHHHHhhCCCcE-EeccC----------------ceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCch
Confidence 66677888889999988 67764 32221 34466788763112344555555 35577777775
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 531 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~~ 531 (532)
.+.. ..++.+|||++.. +.++.++.|.+++++
T Consensus 355 ~~~~---------------------~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 355 GYRG---------------------NGHEFVRINLACPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp GGCT---------------------TGGGEEEEECCSCHHHHHHHHHHHHHHHHT
T ss_pred hhCC---------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4321 0257899999952 234455666666654
No 37
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=3e-26 Score=242.87 Aligned_cols=284 Identities=15% Similarity=0.136 Sum_probs=211.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+...+|+++|++++|.+++++++||++|+..++.+++++||.|+++.+.|+++... ++..|.++..++..|+++|
T Consensus 108 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l 183 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDG----CQQGNAEIVRFRHNSVEDL 183 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHH----HHHSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHH----HHHcCCeeEEeCCCCHHHH
Confidence 578899999999999999999999999999999999999999999999999886543 3456888888998999999
Q ss_pred HHhhcCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---------cccccCCcEEEECCc
Q 009523 280 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHSAT 347 (532)
Q Consensus 280 e~al~~~---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~---------~~l~~gaDivv~S~s 347 (532)
++++++. ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... ..+..++|+++.|+|
T Consensus 184 e~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~s 263 (427)
T 2w8t_A 184 DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFS 263 (427)
T ss_dssp HHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESS
T ss_pred HHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecch
Confidence 9999753 5899999999999999999999999999999999999998764321 111235799999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCce
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVK 422 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v~ 422 (532)
|++|+. ||++++++++++.++... ..++...++..+..+...++.+ ..+.++..++++++.+.|++. ++.
T Consensus 264 K~~g~~----gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 338 (427)
T 2w8t_A 264 KSVGTV----GGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-GFR 338 (427)
T ss_dssp STTCSC----CEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TCE
T ss_pred hhhccC----CCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 999844 599999988887776532 2334556777666655666655 556667778888888888875 332
Q ss_pred EEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhc
Q 009523 423 RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKY 502 (532)
Q Consensus 423 ~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~ 502 (532)
+..+. +.|+++++.+++ ......+.+.|...++.+..|..+.. +
T Consensus 339 -~~~~~---------------~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~------------~------- 382 (427)
T 2w8t_A 339 -LGTET---------------CDSAIVAVMLED-QEQAAMMWQALLDGGLYVNMARPPAT------------P------- 382 (427)
T ss_dssp -ESCSS---------------CCSSEEEEEESS-HHHHHHHHHHHHHTTEECEEECTTTS------------C-------
T ss_pred -ccCCC---------------CCCCEEEEEECC-HHHHHHHHHHHHHCCeEEeeeCCCCC------------C-------
Confidence 22111 136799999964 34566677777655776665432110 0
Q ss_pred CCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 503 GIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 503 gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
...+.|||+++....++.++.+.++|
T Consensus 383 -~~~~~lRi~~~~~~t~e~i~~~~~~l 408 (427)
T 2w8t_A 383 -AGTFLLRCSICAEHTPAQIQTVLGMF 408 (427)
T ss_dssp -TTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred -CCCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 12468999999754444444444433
No 38
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=2.5e-27 Score=247.25 Aligned_cols=307 Identities=15% Similarity=0.152 Sum_probs=204.4
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCC-EEEEcCCCCcchHHHHHHhcccC
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all----~~Gd-~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
.|.|+++..+..+++++++++++|.+ +++++++|++|+.+++.+++ ++|| +|++++++|+++...+.. +...
T Consensus 54 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~-~~~~ 132 (400)
T 3vax_A 54 RHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEH-LAGR 132 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHH-HHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHH-HHhc
Confidence 35566667788899999999999975 67888888899999999988 8999 999999999987766543 3567
Q ss_pred CcEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccC
Q 009523 265 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLG 338 (532)
Q Consensus 265 Gv~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~g 338 (532)
|+++..++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....
T Consensus 133 g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~- 210 (400)
T 3vax_A 133 GFEVDFLTPGPSGRISVEGVMERLRP-DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP- 210 (400)
T ss_dssp TCEEEEECCCTTCCCCHHHHHTTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-
T ss_pred CCeEEEEccCCCCCcCHHHHHHhcCC-CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-
Confidence 9999988764 89999999987 799999999999999999999999999999999999999876532 222234
Q ss_pred CcEEEECCccccCCCCCcEEEEEE-eCh-HHH---HHHHHHh-------hhcCCCccHHHHHHHHHhHHHH----HHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSIS-GSG-KLV---TQIRNLH-------HVLGGALNPNAAYLIIRGMKTL----HLRVQ 402 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv-~~~-~li---~~l~~~~-------~~~G~~~~~~~a~l~l~~l~tl----~~r~~ 402 (532)
+|+++.|+||.+|+.+ .|+++ .++ ++. ..+.... ....++.+....+.+..+++.+ ....+
T Consensus 211 ~d~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 287 (400)
T 3vax_A 211 IDMISISGHKIGAPKG---VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQV 287 (400)
T ss_dssp CSEEEEETGGGTSCSS---CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CcEEEEeHHHhCCCCc---eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHH
Confidence 8999999999777654 45555 544 111 1111111 1123334555444444444433 33445
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
+..++++++.+.|+ .+++. +..|. ..+.+++++|.+++ .....+.+.|. .++.++.|..++.
T Consensus 288 ~~~~~~~~l~~~L~-~~~~~-~~~~~-------------~~~~~~~~~~~~~~--~~~~~l~~~L~-~gi~v~~g~~~~~ 349 (400)
T 3vax_A 288 AAQDLRSRLLAGLA-STSFQ-VNGDQ-------------DHVVPHILNLSFED--VDAEAFLVTLK-DLVAVATGSASTS 349 (400)
T ss_dssp HHHHHHHHHHHHHT-TTTCE-ECSCT-------------TSBCTTEEEEECTT--CCHHHHHHHHH-HHHHHTTTTEEEE
T ss_pred HHHHHHHHHHHhhC-CCCEE-EeCCc-------------ccCCCCEEEEEeCC--CCHHHHHHHHh-cCcEEEecccccC
Confidence 55566777777777 66653 22221 01246789998875 23456677777 7888888865442
Q ss_pred cccCccccccCCCHHHHHhcCCC----CCeEEEEe-cCCC----HHHHHHHHHHHHh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIM----DNLVRFSF-GVED----FEDLKADVLQALH 530 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~----~~~IRlSv-G~ed----~~dli~dL~~AL~ 530 (532)
... .+......+|++ ++.|||++ +... .+++++.|.++++
T Consensus 350 ~~~--------~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 350 ASF--------TPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp EEE--------CCHHHHHTTTCCHHHHTSEEEEEEEEC-------------------
T ss_pred CCC--------CccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 211 122334455655 48999999 8544 4445555555443
No 39
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.95 E-value=5.7e-26 Score=235.27 Aligned_cols=293 Identities=12% Similarity=0.071 Sum_probs=207.6
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~--~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
|+....+..+++++.+++++|.+ + +++++||++|+..++.+++++||+|++++++|++.. +...+...|+++..+
T Consensus 47 ~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 124 (386)
T 2dr1_A 47 RSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVL 124 (386)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEE
Confidence 43333577889999999999976 4 566778889999999999999999999999998731 224455678888888
Q ss_pred CC-----CCHHHHHHhhcC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEE
Q 009523 272 DP-----ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLH 344 (532)
Q Consensus 272 d~-----~dle~Le~al~~-~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~ 344 (532)
+. .|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.
T Consensus 125 ~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 204 (386)
T 2dr1_A 125 EYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFS 204 (386)
T ss_dssp ECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEE
T ss_pred ecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEE
Confidence 75 589999999942 2699999999999999999999999999999999999999876532 2333457899999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHH----------------HHh--hhcCCCccHHHHHHHHHhHHH------HHHH
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIR----------------NLH--HVLGGALNPNAAYLIIRGMKT------LHLR 400 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~----------------~~~--~~~G~~~~~~~a~l~l~~l~t------l~~r 400 (532)
|+||+++++.+ +|++++++++++.++ ... .....+.++..++.+...++. +...
T Consensus 205 s~sK~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~ 282 (386)
T 2dr1_A 205 SSQKAFGVPPG--LAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKW 282 (386)
T ss_dssp ETTSTTCCCSS--CEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred eccccccCCCc--eEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999997642 689999998887762 111 122334555555554445543 2345
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009523 401 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 480 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~ 480 (532)
.++..++++++.+.|+++ ++. +..|. . ...+++++|.++.+ .....+.+.|...++.+..|...
T Consensus 283 ~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~ 346 (386)
T 2dr1_A 283 LEMYEKRAKMVREGVREI-GLD-ILAEP-----G--------HESPTITAVLTPPG-IKGDEVYEAMRKRGFELAKGYGS 346 (386)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCC-BSSCT-----T--------CBCSSEEEEECCTT-CCHHHHHHHHHHTTEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHc-CCe-eCcCc-----c--------ccCCceEEEEcCCC-CCHHHHHHHHHHCCeEEecCccc
Confidence 566678888888888876 432 21120 0 01467899998732 23445666665457777665321
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
..++.|||+++.. +.+++++.|.++++
T Consensus 347 -----------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 347 -----------------------VKEKTFRIGHMGYMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp -----------------------GTTTEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------cCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 0257899999963 34455555555554
No 40
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.95 E-value=4.9e-26 Score=235.36 Aligned_cols=279 Identities=15% Similarity=0.208 Sum_probs=200.4
Q ss_pred CCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.+|+++...+|++++|+++|.+ +++++++|++++..++.+++++| |+|+++.|+|++.... ++..|.++..++
T Consensus 53 ~~Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~----~~~~g~~~~~v~ 128 (356)
T 1fg7_A 53 NRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVS----AETIGVECRTVP 128 (356)
T ss_dssp TSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHH----HHHHTCEEEECC
T ss_pred ccCCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHH----HHHcCCEEEEee
Confidence 4667666789999999999874 45566666799999999999999 9999999999986543 344688888776
Q ss_pred C-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHH---HHHHhCCCEEEEECCCCCCCc-cccc----ccCC
Q 009523 273 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS---DLCHKKGAIVCIDGTFATPLN-QKAL----SLGA 339 (532)
Q Consensus 273 ~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~---~la~~~gi~lIvDet~a~~~~-~~~l----~~ga 339 (532)
. .|+++|+++++ ++++|++++|+||||.+.|.+++. ++|+ +|+++|+||+|..... .... ..+.
T Consensus 129 ~~~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~ 205 (356)
T 1fg7_A 129 TLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPH 205 (356)
T ss_dssp CCTTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTT
T ss_pred CCCCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCC
Confidence 4 37899999886 599999999999999999866555 4555 8999999999875431 1111 2356
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t-----l~~r~~~~~~~a~~la~~ 414 (532)
++++.|+||++|.+| ...|++++++++++.++.....+ ..++..++.+...++. +....++..++++++.+.
T Consensus 206 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 282 (356)
T 1fg7_A 206 LAILRTLSKAFALAG-LRCGFTLANEEVINLLMKVIAPY--PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA 282 (356)
T ss_dssp EEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHHHSCSS--CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchHhhcCch-hhhEEEEeCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998655 45789999999998888765444 3556655555544433 444555666788888899
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC-CCcccccccCccccccC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF-GGCESIVDQPAIMSYWD 493 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~-G~~~sl~~~pa~~s~~~ 493 (532)
|++++.+..+ .|. .|+++++.++ + ...+.+.|...++.+.. |..+
T Consensus 283 L~~~~~~~~~-~~~----------------~~~~~~~~~~-~---~~~l~~~L~~~gI~v~~~g~~~------------- 328 (356)
T 1fg7_A 283 LKEIPCVEQV-FDS----------------ETNYILARFK-A---SSAVFKSLWDQGIILRDQNKQP------------- 328 (356)
T ss_dssp HHHSTTEEEE-CCC----------------SSSEEEEEET-T---HHHHHHHHHHTTEECEECTTST-------------
T ss_pred HHhCCCceEE-CCC----------------CCeEEEEECC-C---HHHHHHHHHHCCEEEEECCCCC-------------
Confidence 9887754322 332 3668899986 2 34455555555777665 5321
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 494 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
|. ++++|||++. ++.++.+.++|++
T Consensus 329 ---------~~-~~~iRis~~~---~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 329 ---------SL-SGCLRITVGT---REESQRVIDALRA 353 (356)
T ss_dssp ---------TC-TTEEEEECCC---HHHHHHHHHHHHT
T ss_pred ---------CC-CCeEEEEeCC---HHHHHHHHHHHHh
Confidence 11 4689999984 3445666666654
No 41
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=3.9e-27 Score=242.98 Aligned_cols=289 Identities=14% Similarity=0.163 Sum_probs=203.1
Q ss_pred CCCCCCCchhHHHHHHH-HHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 193 FEYGRYGNPTTVVVEEK-MSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~-lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+.++++..+...+++++ +++++|.+..+++++|++|+..++.+++++||+|+++.++|++.... +...|+++..+
T Consensus 45 ~~~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v 120 (371)
T 2e7j_A 45 GRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVA----AERAGLNIALV 120 (371)
T ss_dssp --------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHHTTCEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHH----HHHcCCeEEEe
Confidence 34556678889999999 99999988445555557999999999999999999999999986643 45678888888
Q ss_pred C--CC-----CHHHHHHhhc-----CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccC
Q 009523 272 D--PA-----DMEGLEAALN-----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLG 338 (532)
Q Consensus 272 d--~~-----dle~Le~al~-----~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~g 338 (532)
+ .+ |+++|+++++ + ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......+
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 199 (371)
T 2e7j_A 121 PKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG 199 (371)
T ss_dssp CCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHT
T ss_pred ecccCCCCCcCHHHHHHHHHhhcccC-CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcC
Confidence 8 54 7999999997 5 699999999999999999999999999999999999999876543 3444568
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeChHHHHH-HHHHhh--hc-----CCCccHHHHHHHHHhHHHHH-HHHHHH--HHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHH--VL-----GGALNPNAAYLIIRGMKTLH-LRVQQQ--NST 407 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~-l~~~~~--~~-----G~~~~~~~a~l~l~~l~tl~-~r~~~~--~~~ 407 (532)
+|+++.|+||+++++. .+|++++++++++. ++.... .. .++.++...+.+...++.+. ...++. .++
T Consensus 200 ~di~~~s~sK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 277 (371)
T 2e7j_A 200 ADFIVGSGHKSMAASG--PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEK 277 (371)
T ss_dssp CSEEEEEHHHHSSCCS--SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred CCEEEecCCcCCCCCC--CcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999888764 46899999887776 654332 11 23344444444444555444 234455 678
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
++++.+.|++. ++. +..|. .+.+++++|.++ ....+.+.|...++.+.. ..
T Consensus 278 ~~~l~~~L~~~-~~~-~~~~~--------------~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~-------- 328 (371)
T 2e7j_A 278 ARRFAAEMEKL-GIK-QLGDN--------------PHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-EL-------- 328 (371)
T ss_dssp HHHHHHHHHHT-TCE-EESSS--------------SCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HH--------
T ss_pred HHHHHHHHHHc-CcE-EecCC--------------CccCceEEEECC----CHHHHHHHHHHCCEEEEe-cc--------
Confidence 88888899886 553 22221 012568999885 456677777755544322 00
Q ss_pred cccccCCCHHHHHhc---CCCCCeEE-EEecCC-CHHHHHHHHHHHH
Q 009523 488 IMSYWDLSQSERLKY---GIMDNLVR-FSFGVE-DFEDLKADVLQAL 529 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~---gi~~~~IR-lSvG~e-d~~dli~dL~~AL 529 (532)
... |..++.|| |+++.. ..++.++.+.++|
T Consensus 329 ------------~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l 363 (371)
T 2e7j_A 329 ------------KSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAF 363 (371)
T ss_dssp ------------HHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHH
T ss_pred ------------ccccccCCCCCceEEEEeeccCCCHHHHHHHHHHH
Confidence 011 34468899 999975 4344344444433
No 42
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=1.4e-25 Score=234.41 Aligned_cols=284 Identities=14% Similarity=0.152 Sum_probs=209.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 278 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~ 278 (532)
..+..+++++.++++.|.++++++++|++|+..++.+++++||+|+++.+.|+++... +...|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~----~~~~g~~~~~v~~~d~~~ 161 (398)
T 3a2b_A 86 TLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDG----SRLSFSKVIKYGHNNMED 161 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHH----HHHSSSEEEEECTTCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHH----HHHcCCceEEeCCCCHHH
Confidence 4578899999999999998899999999999999999999999999999999986543 445688999999889999
Q ss_pred HHHhhcCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc----ccccc-c----CCcEEEECC
Q 009523 279 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS-L----GADLVLHSA 346 (532)
Q Consensus 279 Le~al~~~---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~----~~~l~-~----gaDivv~S~ 346 (532)
|++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ..... . ++|+++.|+
T Consensus 162 l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~ 241 (398)
T 3a2b_A 162 LRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTF 241 (398)
T ss_dssp HHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecc
Confidence 99999763 589999999999999999999999999999999999999876522 11111 1 369999999
Q ss_pred ccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCc
Q 009523 347 TKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 347 sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v 421 (532)
||++++.| |++++++++++.++... .......++.....+...++.+ ....++..++++++.+.|++. ++
T Consensus 242 sK~~~~~G----G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 316 (398)
T 3a2b_A 242 SKSLASLG----GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GF 316 (398)
T ss_dssp SSTTCSSC----EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred cccccCCC----cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 99999653 89999999988887642 2233344555443333444433 344556667788888888875 33
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHh
Q 009523 422 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 501 (532)
Q Consensus 422 ~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~ 501 (532)
. + ++ +.|.++++.++. ......+.+.|...++.+..|..+.. +
T Consensus 317 ~-~-~~----------------~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~---~--------------- 359 (398)
T 3a2b_A 317 D-L-GA----------------TESPILPIFIRS-NEKTFWVTKMLQDDGVFVNPVVSPAV---P--------------- 359 (398)
T ss_dssp C-B-CS----------------CCSSEEEEECCC-HHHHHHHHHHHHHTTEECEEECTTTS---C---------------
T ss_pred C-c-CC----------------CCCCEEEEEcCC-HHHHHHHHHHHHHCCcEEEeeCCCCC---C---------------
Confidence 2 1 11 125789999864 23456677766555777766543210 0
Q ss_pred cCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 502 YGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 502 ~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
..++.+||+++.. +.+.+++.|.++++
T Consensus 360 --~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 360 --AEESLIRFSLMATHTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp --GGGCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 0257899999963 34455555555554
No 43
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=1.5e-26 Score=239.19 Aligned_cols=303 Identities=14% Similarity=0.119 Sum_probs=204.2
Q ss_pred CCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 198 YGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all----~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
...+...++++++++++|.+ +++++++|++|+.+++.++. ++||+|++++++|+++...+. .+...|++++.+
T Consensus 40 ~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v 118 (382)
T 4eb5_A 40 KAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYI 118 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEEEe
Confidence 34567889999999999975 56777888899999999987 899999999999998765553 345578998888
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEEC
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 345 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S 345 (532)
+. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|++ |+|++++.+.. .+....++|+++.|
T Consensus 119 ~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s 196 (382)
T 4eb5_A 119 PVGKYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTIS 196 (382)
T ss_dssp CBCTTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEE
T ss_pred ccCCCCccCHHHHHHHhcC-CCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEee
Confidence 75 389999999987 699999999999999999999999999999999 99999874321 22223478999999
Q ss_pred CccccCCCCCcEEEEEEeChHH-HHHHHH----HhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHH
Q 009523 346 ATKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILE 416 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~l-i~~l~~----~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L~ 416 (532)
+||++|+.| .|+++.+++. +..+.. ......++.+....+.+..+++. +....++..++++++.+.|+
T Consensus 197 ~sK~~g~~g---~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 273 (382)
T 4eb5_A 197 SNDIYGPKG---VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVL 273 (382)
T ss_dssp TGGGTCCSS---CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHhcCCCc---eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 999987654 3666665542 111100 01111233444433333333332 34455566677888888888
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCH
Q 009523 417 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 496 (532)
Q Consensus 417 ~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~ 496 (532)
+.|++. +..|. . ...+++++|.+++ .....+.+.|...++.+..|..++... ..+.
T Consensus 274 ~~~~~~-~~~~~-----~--------~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~--------~~~~ 329 (382)
T 4eb5_A 274 KIEESY-LNGHP-----E--------KRLPNNVNVRFSY--IEGESIVLSLDMAGIQASTGSACSSKT--------LQPS 329 (382)
T ss_dssp TSTTEE-ECSCS-----S--------SBCTTEEEEEETT--SCHHHHHHHHHHHTCBCBCCCGGGTSS--------CCCC
T ss_pred hCCCeE-EeCCc-----c--------cCCCCEEEEEeCC--cCHHHHHHHHHHCCEEEeccccccCCC--------Cccc
Confidence 876653 32221 0 0136789999874 223455555555577777775533210 0122
Q ss_pred HHHHhcCCC----CCeEEEEecCCC----HHHHHHHHHHHHh
Q 009523 497 SERLKYGIM----DNLVRFSFGVED----FEDLKADVLQALH 530 (532)
Q Consensus 497 ~~~~~~gi~----~~~IRlSvG~ed----~~dli~dL~~AL~ 530 (532)
.....+|++ ++.|||+++... .+++++.|.++++
T Consensus 330 ~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (382)
T 4eb5_A 330 HVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp HHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 233445653 689999999643 4445555555543
No 44
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.95 E-value=7.9e-26 Score=234.86 Aligned_cols=280 Identities=14% Similarity=0.108 Sum_probs=201.8
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhhC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 191 ASFEYGRYGNPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 191 ~~~~Y~R~~~p~~~~Le~~lA~l~g--a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
..+.|+.+..+..+++++.+++++| . ++++++++|++|+..++.+++++||+|+++.++|++... .+...|.
T Consensus 61 ~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~ 136 (391)
T 4dq6_A 61 EIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS----VVKNNNR 136 (391)
T ss_dssp CCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHH----HHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH----HHHHcCC
Confidence 3567887777888889999999888 2 568888888999999999999999999999999998654 3445688
Q ss_pred EEEEeCCC---------CHHHHHHhhcCCCeeEEEEeCCCCCCCccc---CHHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 267 TATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 267 ~v~~vd~~---------dle~Le~al~~~~tklV~lesP~NptG~v~---dl~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
++..++.+ |+++|++++++ +++|++++|+||||.+. ++++|+++|+++|+++|+|++|+....
T Consensus 137 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 214 (391)
T 4dq6_A 137 ELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH 214 (391)
T ss_dssp EEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred eEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC
Confidence 88887654 89999999976 99999999999999995 477889999999999999999865321
Q ss_pred --cccccc-----CCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcC-CCccHHHHHHHHHhHHH----HH
Q 009523 332 --QKALSL-----GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLG-GALNPNAAYLIIRGMKT----LH 398 (532)
Q Consensus 332 --~~~l~~-----gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G-~~~~~~~a~l~l~~l~t----l~ 398 (532)
...... +.++++.|+||.+|.+| ...|++++++ ++++.++......+ .+.++..+..+...++. +.
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 293 (391)
T 4dq6_A 215 KHIPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLE 293 (391)
T ss_dssp CCCCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHH
T ss_pred CccCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHH
Confidence 111122 33489999999997555 4578888775 88888877654433 24566655554444443 44
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecC
Q 009523 399 LRVQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSF 476 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~ 476 (532)
.+.++..++++.+.+.|++ .|++..+ .|. .+.++++.++........+.+.|... ++.+..
T Consensus 294 ~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 356 (391)
T 4dq6_A 294 SFLEYLESNIDFAIKYINENMPKLKVR-KPE----------------GTYLLWVDFSALGLSDEELESILVQKGKVALNQ 356 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEC-CCS----------------BSSEEEEECGGGCCCHHHHHHHHHHTTCEECEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEec-CCC----------------ccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeC
Confidence 5556666788888888887 5766422 221 24456788863112344566666544 777776
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
|..+.. ..++.+|||++.
T Consensus 357 g~~~~~---------------------~~~~~iRis~~~ 374 (391)
T 4dq6_A 357 GNSFGI---------------------GGSGYQRINLAC 374 (391)
T ss_dssp GGGGCT---------------------TCTTEEEEECCS
T ss_pred chhhCC---------------------CCCCeEEEEEcC
Confidence 644320 125799999995
No 45
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.95 E-value=1.1e-26 Score=242.85 Aligned_cols=290 Identities=16% Similarity=0.185 Sum_probs=207.7
Q ss_pred CCCchhHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 197 RYGNPTTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga-----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+...+..+++++.+++++|. ++++++++|++|+..++.+++++||+|+++.+.|.+... .++..|.++..+
T Consensus 78 ~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~ 153 (407)
T 3nra_A 78 RGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRK----LVEFFEGEMVPV 153 (407)
T ss_dssp TCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHH----HHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHH----HHHHcCCEEEEe
Confidence 34456778888889988886 567888888899999999999999999999999997553 345567887777
Q ss_pred CC-----------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc------
Q 009523 272 DP-----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN------ 331 (532)
Q Consensus 272 d~-----------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~------ 331 (532)
+. .|+++|++++++ ++++|++++|+||||.+.| +++|+++|++||+++|+|++|+....
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~ 232 (407)
T 3nra_A 154 QLDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYT 232 (407)
T ss_dssp EBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCC
T ss_pred ecccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 64 289999999987 7999999999999999999 88999999999999999999875321
Q ss_pred -cccc---ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHH
Q 009523 332 -QKAL---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQ 403 (532)
Q Consensus 332 -~~~l---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~ 403 (532)
...+ ..+.++++.|+||.+|.+| ...|++++++++++.++..........++..++.+...++ .+..+.++
T Consensus 233 ~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 311 (407)
T 3nra_A 233 HLRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIAR 311 (407)
T ss_dssp CGGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHH
T ss_pred ChhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHH
Confidence 1111 1446799999999998554 3578999999999988877666665556665555444432 35556667
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESI 482 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl 482 (532)
..++++++.+.|+++|++.. ..| ..|.++++.++........+.+.|. ..++.+..|..+.
T Consensus 312 ~~~~~~~l~~~L~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~- 373 (407)
T 3nra_A 312 HQAIRDELLHVLRGCEGVFA-RTP----------------QAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS- 373 (407)
T ss_dssp HHHHHHHHHHHHHTSTTCBC-CCC----------------SBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC-
T ss_pred HHHHHHHHHHHHhcCCCcee-ccC----------------CeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC-
Confidence 77888889999988765531 111 1346777777641123345555552 2467776664432
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
+ ..++.||||++. ++.++.++.|.++++
T Consensus 374 ---~-----------------~~~~~iRis~~~~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 374 ---P-----------------HTADSVRLNFSQDHEAAVAAARRIVTLVE 403 (407)
T ss_dssp ---T-----------------TCTTBEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ---C-----------------CCCCEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 1 135799999996 123344555555554
No 46
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=6.2e-26 Score=234.53 Aligned_cols=287 Identities=15% Similarity=0.102 Sum_probs=204.1
Q ss_pred CchhHHHHHHHHHhhhCCCc----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 199 GNPTTVVVEEKMSALEGAES----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~----~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
..+..+++++++++++|.+. +++++||++|+. ++.+++++||+|+++++.|++.. +...+...|+++..++.+
T Consensus 33 ~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~ 109 (384)
T 3zrp_A 33 FVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDR--WEQIFKRYPVNVKVLRPS 109 (384)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHH--HHHHHTTSSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHH--HHHHHHHcCCcEEEecCC
Confidence 35678889999999999754 677888889999 99999999999999999997632 334556789999988754
Q ss_pred -----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCcc
Q 009523 275 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 348 (532)
Q Consensus 275 -----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~sK 348 (532)
|+++|+++++++++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|+||
T Consensus 110 ~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 189 (384)
T 3zrp_A 110 PGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQK 189 (384)
T ss_dssp TTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTS
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcc
Confidence 899999999875699999999999999999999999999999999999999875432 33345679999999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHH-------------HHHhh---h----c---CCCccHHHHHHHHHhHHH-----HHHH
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQI-------------RNLHH---V----L---GGALNPNAAYLIIRGMKT-----LHLR 400 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l-------------~~~~~---~----~---G~~~~~~~a~l~l~~l~t-----l~~r 400 (532)
+++++.+ .|++++++++++.+ ..+.. . . .++.+......+...++. +...
T Consensus 190 ~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~ 267 (384)
T 3zrp_A 190 ALGSAAG--LGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENR 267 (384)
T ss_dssp TTCCCSS--EEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cccCCCc--eEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 8875432 68899999888776 22211 1 0 023444443333333332 3345
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009523 401 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 480 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~ 480 (532)
.++..++++++.+.|+++ ++. +..|. +. ...+++++|.+++ .....+.+.|...++.+..|...
T Consensus 268 ~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~ 331 (384)
T 3zrp_A 268 IKRHTMVASAIRAGLEAL-GLE-IVARR----PE--------SYSNTVTGVILKV--ADPQKVLAGTVNEGVEFAPGVHP 331 (384)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCC-BSCSS----GG--------GBCSSEEEEECSS--SCHHHHHHHHHTTTCCCEECCCT
T ss_pred HHHHHHHHHHHHHHHHHC-CCe-EccCc----cc--------ccCccEEEEECCC--CCHHHHHHHHHHCCEEEecCCCC
Confidence 556667788888888876 432 21111 00 1246788999875 33456666666557666655310
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
. .+.|||+++.. +.+++++.|.++++
T Consensus 332 ~------------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 361 (384)
T 3zrp_A 332 A------------------------FKYFRIGHMGWVTPNDAIIAISVIERTLR 361 (384)
T ss_dssp T------------------------CCEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred C------------------------cCEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 0 17899999853 44555666666554
No 47
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.95 E-value=7.8e-26 Score=234.53 Aligned_cols=290 Identities=14% Similarity=0.105 Sum_probs=209.6
Q ss_pred CCCc--hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 197 RYGN--PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 197 R~~~--p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+|+. +...+++++|++++|.+ +++++++|++|+..++.++ +++||+|+++.++|++....+....+..|.++..+
T Consensus 53 ~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v 132 (390)
T 1elu_A 53 ANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF 132 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEE
Confidence 4444 77889999999999975 6888889999999999999 89999999999999987655444455668888888
Q ss_pred CCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHH----hCCCEEEEECCCCCCCc-ccccccCC
Q 009523 272 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLN-QKALSLGA 339 (532)
Q Consensus 272 d~~-------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~----~~gi~lIvDet~a~~~~-~~~l~~ga 339 (532)
+.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+ ++|+++|+|++++.+.. ......++
T Consensus 133 ~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~ 211 (390)
T 1elu_A 133 PVAATLNQGDAAAVLANHLGP-KTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEV 211 (390)
T ss_dssp CCGGGSSSSCHHHHHHTTCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCC
T ss_pred cCCCCCCccchHHHHHHhcCC-CceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCC
Confidence 752 68999999987 7999999999999999999999999999 99999999999875422 22224578
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh----------------------hhcCCCccHHHHHHHHHhHH--
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAYLIIRGMK-- 395 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----------------------~~~G~~~~~~~a~l~l~~l~-- 395 (532)
|+++.|+||++.++.+ .|++++++++++.++... ....++.++.....+..+++
T Consensus 212 d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l 289 (390)
T 1elu_A 212 DYYAFTGHKWFAGPAG--VGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLH 289 (390)
T ss_dssp SEEEEESSSTTCCCTT--CEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred CEEEccccccccCCCc--eEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHH
Confidence 9999999995544432 588888888776654311 11122344443332222333
Q ss_pred -H---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCc
Q 009523 396 -T---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 471 (532)
Q Consensus 396 -t---l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~ 471 (532)
. +....++..++++++.+.|++.+++. +..|. .+.|+++.|+++.+ .....+.+.|...+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~g 353 (390)
T 1elu_A 290 QRQGTAEERYQAICQRSEFLWRGLNQLPHVH-CLATS--------------APQAGLVSFTVDSP-LGHRAIVQKLEEQR 353 (390)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHSTTEE-ESCSS--------------CCSSSEEEEEECSS-SCHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHhcCCcE-EecCc--------------cccccEEEEEcCCC-CCHHHHHHHHHHCC
Confidence 2 44456677788889999998877653 33331 12467888988532 22345555555446
Q ss_pred eeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 472 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 472 i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+.+..|. .++.||||++....++.++.+.++|++
T Consensus 354 i~v~~~~--------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 354 IYLRTIA--------------------------DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp EECEEET--------------------------TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred EEEEecC--------------------------CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 6554431 147899999877777777888877765
No 48
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=5e-26 Score=234.89 Aligned_cols=282 Identities=13% Similarity=0.145 Sum_probs=201.7
Q ss_pred CCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.+|+++...+|++++|+++|. ++++++++|++|+..++.+++++||+|+++.++|.+... .++..|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~v~ 134 (360)
T 3hdo_A 59 LRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGT----LAEVQGARVRTFG 134 (360)
T ss_dssp GGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHH----HHHHHTCEEEEEC
T ss_pred hhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHH----HHHHCCCEEEEee
Confidence 4566777778999999999995 578888999999999999999999999999999998653 3455688888887
Q ss_pred CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccc----cccCCcEEEECCcc
Q 009523 273 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSLGADLVLHSATK 348 (532)
Q Consensus 273 ~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~----l~~gaDivv~S~sK 348 (532)
.++...+++.++..++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+....... ...+.++++.|+||
T Consensus 135 ~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK 214 (360)
T 3hdo_A 135 LTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSK 214 (360)
T ss_dssp BCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTT
T ss_pred CCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchH
Confidence 65322222222222467999999999999999999999999999999999999874211111 12456799999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVH 425 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v~~V~ 425 (532)
.+|.+| ...|++++++++++.++.....+ ..++..++.+...++ .+..+.++..++++++.+.|+++ ++. +
T Consensus 215 ~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~- 288 (360)
T 3hdo_A 215 SYSLAG-MRIGLAIARPEVIAALDKIRDHY--NLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYD-V- 288 (360)
T ss_dssp TTSCTT-SCCEEEECCHHHHHHHHHHSCSC--CSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-
T ss_pred hhcCCc-cceeeEeeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-
Confidence 998655 45789999999999888765443 356665555554444 34556666778888889999887 443 2
Q ss_pred CCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCC
Q 009523 426 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 505 (532)
Q Consensus 426 ~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~ 505 (532)
+|. .|+++++.+++. ....+.+.|...++.++.|+. +. .
T Consensus 289 ~~~----------------~~~~~~~~~~~~--~~~~l~~~l~~~gi~v~~~~~------~~-----------------~ 327 (360)
T 3hdo_A 289 IPS----------------QGNYLFATPPDR--DGKRVYDGLYARKVLVRHFSD------PL-----------------L 327 (360)
T ss_dssp CCC----------------SSSEEEEECTTC--CHHHHHHHHHHTTEECBCCCS------TT-----------------T
T ss_pred cCC----------------CccEEEEECCCC--CHHHHHHHHHHCCEEEEECCC------CC-----------------C
Confidence 221 366888888742 234555556555777765532 10 2
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 506 DNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 506 ~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
++.+|||++. ++.++.|.++|+
T Consensus 328 ~~~iRis~~~---~~e~~~l~~al~ 349 (360)
T 3hdo_A 328 AHGMRISIGT---REEMEQTLAALK 349 (360)
T ss_dssp TTSEEEECCC---HHHHHHHHHHHH
T ss_pred CCEEEEEcCC---HHHHHHHHHHHH
Confidence 4789999993 333455555554
No 49
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.94 E-value=3.6e-26 Score=236.35 Aligned_cols=303 Identities=16% Similarity=0.095 Sum_probs=205.2
Q ss_pred CchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 199 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all----~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
..+...++++++++++|.+ +++++++|++|+..++.++. ++||+|+++.++|++....+. .+...|.++..++
T Consensus 42 ~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~ 120 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVP 120 (384)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEc
Confidence 3456788999999999974 67888888999999999987 799999999999998765442 3455688888887
Q ss_pred C-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC--CEEEEECCCCCCC-cccccccCCcEEEE
Q 009523 273 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPL-NQKALSLGADLVLH 344 (532)
Q Consensus 273 ~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g--i~lIvDet~a~~~-~~~~l~~gaDivv~ 344 (532)
. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++| +++|+|++++.+. ..+....++|+++.
T Consensus 121 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~ 199 (384)
T 1eg5_A 121 VDSRGVVKLEELEKLVDE-DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASF 199 (384)
T ss_dssp BCTTSCBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEE
T ss_pred cCCCCccCHHHHHHHhCC-CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEe
Confidence 5 379999999987 7999999999999999999999999999999 9999999976321 12222347899999
Q ss_pred CCccccCCCCCcEEEEEEeChHH--HHHHHHH---hhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q 009523 345 SATKFIGGHNDVLAGSISGSGKL--VTQIRNL---HHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~l--i~~l~~~---~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L 415 (532)
|+||++|++| .|++++++++ ...+... .....++.++...+.+...++. +....++..++++++.+.|
T Consensus 200 s~sK~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 276 (384)
T 1eg5_A 200 SAHKFHGPKG---VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGL 276 (384)
T ss_dssp EGGGGTSCTT---CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHhcCCCc---eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 9999988766 4888888765 2211111 0112234555554444444443 3344556667788888888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++ +++. +..|.- .+.+.+++|.+++. ....+.+.|...++.+..|..++... . .+
T Consensus 277 ~~-~g~~-~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~--~------~~ 331 (384)
T 1eg5_A 277 MN-LGAH-IITPLE-------------ISLPNTLSVSFPNI--RGSTLQNLLSGYGIYVSTSSACTSKD--E------RL 331 (384)
T ss_dssp HT-TTCE-ECSCTT-------------SBCTTEEEEECTTC--CHHHHHHHHHHTTEECBC-------------------
T ss_pred CC-CCeE-EeCCcc-------------cCCCCEEEEEeCCC--CHHHHHHHHhhCCeEEeccccccCCC--C------cc
Confidence 87 5553 322210 11356888888642 23456666666688888775432110 0 01
Q ss_pred HHHHHhcCCC----CCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 496 QSERLKYGIM----DNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 496 ~~~~~~~gi~----~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
......+|++ ++.|||+++. ++.+.+++.|.+++++
T Consensus 332 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 332 RHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp -CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1123344543 4799999995 3445566666666553
No 50
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.94 E-value=2.5e-25 Score=230.48 Aligned_cols=280 Identities=16% Similarity=0.085 Sum_probs=202.7
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~g--a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
.+.|+....+..+++++.+++.+| . ++++++++|++|+..++.+++++||+|+++.++|++... .+...|.+
T Consensus 54 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~----~~~~~g~~ 129 (383)
T 3kax_A 54 IFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFE----MVTTNNRQ 129 (383)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHH----HHHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH----HHHHcCCE
Confidence 466777677888889999999887 2 468888888899999999999999999999999998653 34556888
Q ss_pred EEEeCC--------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCc-----
Q 009523 268 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN----- 331 (532)
Q Consensus 268 v~~vd~--------~dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~----- 331 (532)
+..++. .|+++|++++++ ++++|++++|+||||.+.|. ++|+++|+++|+++|+|++|+....
T Consensus 130 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 208 (383)
T 3kax_A 130 LCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTH 208 (383)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccceecCCcEEEcHHHHHHHhCc-CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc
Confidence 887764 489999999966 79999999999999999984 5666669999999999999865321
Q ss_pred ccccc-----cCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCC-CccHHHHHHHHHhHHH----HHHH
Q 009523 332 QKALS-----LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMKT----LHLR 400 (532)
Q Consensus 332 ~~~l~-----~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~-~~~~~~a~l~l~~l~t----l~~r 400 (532)
..... .+.++++.|+||.++.+| ...|++++ ++++++.++......+. +.++..++.+...++. +..+
T Consensus 209 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 287 (383)
T 3kax_A 209 TPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEI 287 (383)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred eeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHH
Confidence 11111 255699999999998555 35788887 67888888776554433 5566665555544432 4555
Q ss_pred HHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCC
Q 009523 401 VQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGG 478 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~ 478 (532)
.++..++++++.+.|++ .|++. +..|. .+.++++.++........+.+.|. ..++.++.|.
T Consensus 288 ~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 350 (383)
T 3kax_A 288 RFYIEDNAKFACEYIKDHIPTLS-VMKPE----------------GSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGE 350 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCE-ECCCS----------------BSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESG
T ss_pred HHHHHHHHHHHHHHHHhhCCCce-EecCC----------------ceEEEEEEccccCCCHHHHHHHHHhhCCEEeECch
Confidence 56667788888888987 57663 22221 244567887631123456666664 5688887775
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
.+.. ..++.+|||++.
T Consensus 351 ~~~~---------------------~~~~~iRi~~~~ 366 (383)
T 3kax_A 351 KYGL---------------------GGEEHIGINIGC 366 (383)
T ss_dssp GGCT---------------------TCTTEEEEECSS
T ss_pred hhcC---------------------CCCCeEEEEEcC
Confidence 4321 125899999995
No 51
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=1.8e-25 Score=234.86 Aligned_cols=281 Identities=13% Similarity=0.113 Sum_probs=205.0
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHH
Q 009523 201 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 280 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le 280 (532)
+..+++++++++++|.+..+++++|++|+..++.+++++||.|+++++.|+++... +...|.++..++..|+++|+
T Consensus 104 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~le 179 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEG----ARYANAQAHPFMHNNCDHLR 179 (409)
T ss_dssp TTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHH----HHHTTCEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHH----HHHcCCeEEEecCCCHHHHH
Confidence 55678999999999999899999999999999999999999999999999886543 34458888888888999999
Q ss_pred HhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-------cc--cccCCcEEEECCccccC
Q 009523 281 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KA--LSLGADLVLHSATKFIG 351 (532)
Q Consensus 281 ~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~-------~~--l~~gaDivv~S~sK~lg 351 (532)
++++++++++|++++|+||||.+.|+++|.++|++||+++|+|++++.+... .. ...++|+++.|++|.++
T Consensus 180 ~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~ 259 (409)
T 3kki_A 180 MLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFA 259 (409)
T ss_dssp HHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC
T ss_pred HHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhC
Confidence 9997645899999999999999999999999999999999999998653210 11 12257899999999999
Q ss_pred CCCCcEEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009523 352 GHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHY 426 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v~~V~~ 426 (532)
++ +|++++++++++.++... ..++...++..+..+...++.+ ....++..++++++.+.|++.. +. .
T Consensus 260 ~~----gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~---~ 331 (409)
T 3kki_A 260 YR----AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLG-LT---I 331 (409)
T ss_dssp SS----CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTT-CC---C
T ss_pred CC----ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-Cc---c
Confidence 76 589999988887776532 2344456666655555555543 3444556677888888888752 11 1
Q ss_pred CCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCC
Q 009523 427 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 506 (532)
Q Consensus 427 Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~ 506 (532)
+ +.+.++++.++. ......+.+.|...++.+..+.. |.. ....
T Consensus 332 ~----------------~~~~~~~~~~~~-~~~~~~~~~~L~~~Gv~v~~~~~------~~~--------------~~~~ 374 (409)
T 3kki_A 332 R----------------SESQIIGLETGD-ERNTEKVRDYLESNGVFGSVFCR------PAT--------------SKNK 374 (409)
T ss_dssp C----------------CSSSEEEEEEES-HHHHHHHHHHHHHTTEECEEECT------TSS--------------CTTC
T ss_pred C----------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCceEeeeCC------CCc--------------CCCC
Confidence 1 146789999874 23455666666555665543211 110 1135
Q ss_pred CeEEEEecCCCH----HHHHHHHHHHHh
Q 009523 507 NLVRFSFGVEDF----EDLKADVLQALH 530 (532)
Q Consensus 507 ~~IRlSvG~ed~----~dli~dL~~AL~ 530 (532)
+.|||+++...+ +++++.|.++++
T Consensus 375 ~~iRi~~~~~~t~e~i~~~~~~l~~~l~ 402 (409)
T 3kki_A 375 NIIRLSLNSDVNDEQIAKIIEVCSDAVN 402 (409)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cEEEEEccCCCCHHHHHHHHHHHHHHHh
Confidence 799999986444 444455555543
No 52
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=2.1e-26 Score=238.85 Aligned_cols=303 Identities=14% Similarity=0.130 Sum_probs=213.2
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
+.++..+++|+++++++|.+++++++||++|+..++.++ +++||+|+++.++|+++... +...|.++.+++.+
T Consensus 33 ~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~----~~~~g~~~~~~~~~~~ 108 (373)
T 3frk_A 33 ILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALA----VSYTGAKPIFVEPDIR 108 (373)
T ss_dssp SSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHH----HHHHSCEEEEECEETT
T ss_pred cCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEecccc
Confidence 356889999999999999999999999999999999999 99999999999999986643 34558888888754
Q ss_pred ----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--CcEEEECCc-
Q 009523 275 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT- 347 (532)
Q Consensus 275 ----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aDivv~S~s- 347 (532)
|+++|++++++ ++++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+...+....| .|+++.|++
T Consensus 109 ~~~~d~~~l~~~l~~-~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 184 (373)
T 3frk_A 109 TYNIDPSLIESAITE-KTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYP 184 (373)
T ss_dssp TTEECGGGTGGGCCT-TEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCT
T ss_pred ccCcCHHHHHHhcCC-CCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcC
Confidence 89999999987 799988 6889999999999999999999999999998865444444445 799999966
Q ss_pred -cccCCCCCcEEEEEEeCh-HHHHHHHHHhhh------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 009523 348 -KFIGGHNDVLAGSISGSG-KLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAK 413 (532)
Q Consensus 348 -K~lgg~gd~~gG~lv~~~-~li~~l~~~~~~------------~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~ 413 (532)
|++++++ .+|++++++ ++++.++..... +...+++..+.+.+..++.+....++..++++++.+
T Consensus 185 ~K~l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (373)
T 3frk_A 185 AKNLGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIA 262 (373)
T ss_dssp TSSSCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCccCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998855 378888764 577776654321 112346666666666666666666777777888888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccccc-
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW- 492 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~- 492 (532)
.|++.+ + ..|..+.... ....++.+... + ...+.+.|...++.++.+....+.+.|......
T Consensus 263 ~l~~~~-~---~~~~~~~~~~---------~~~~~~~~~~~-~---~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~ 325 (373)
T 3frk_A 263 GINNPN-V---IIPVEADYAK---------HVWYTFVIRSE-K---RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGF 325 (373)
T ss_dssp HCCCTT-E---ECCCCCTTEE---------CCCSSEEEEES-S---HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCC
T ss_pred HhccCc-e---EeccCCCCCc---------eeeEEEEEEeC-C---HHHHHHHHHHCCCCcccCcCCccccChHHHhcCC
Confidence 777665 3 2232211100 01122344443 2 344555555557777755422333333221110
Q ss_pred ---CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 493 ---DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 493 ---~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.++..+. +..+.|||+++...+++.++.+.++|++
T Consensus 326 ~~~~~~~~~~----~~~~~lrl~~~~~~t~~di~~~~~~l~~ 363 (373)
T 3frk_A 326 KTGNFPIAEK----IANEILSIPIWYGMKNEEIEYVIDKINA 363 (373)
T ss_dssp CTTSSHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 1111111 1246899999999999889999888875
No 53
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.94 E-value=3.4e-25 Score=227.87 Aligned_cols=283 Identities=16% Similarity=0.164 Sum_probs=205.9
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 196 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
.+|+++...+++++++++++. ++++++++|++|+.+++..+ |+|+++.++|++... .++..|.++..++.
T Consensus 56 ~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~----~~~~~g~~~~~~~~ 127 (361)
T 3ftb_A 56 GVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEI----NAKKHGVSVVFSYL 127 (361)
T ss_dssp GSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHH----HHHHTTCEEEEEEC
T ss_pred cCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHH----HHHHcCCeEEEeec
Confidence 455677789999999999985 45677788889999999877 999999999998654 34456888888764
Q ss_pred -----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc---cccc----ccC
Q 009523 274 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---QKAL----SLG 338 (532)
Q Consensus 274 -----~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~---~~~l----~~g 338 (532)
.++++|++++++ +++|++++|+||||.+.| +++|+++|+++|+++|+|++++.... .... ..+
T Consensus 128 ~~~~~~~~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 205 (361)
T 3ftb_A 128 DENMCIDYEDIISKIDD--VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYS 205 (361)
T ss_dssp CTTSCCCHHHHHHHTTT--CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCS
T ss_pred CcccCCCHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCC
Confidence 367899999976 899999999999999997 55677788899999999999764322 1111 224
Q ss_pred CcEEEECCccccCCCCCcEEEEEE-eChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~ 414 (532)
.++++.|+||.++.+| ...|+++ +++++++.++.....+ ..++..++.+...+ +.+..+.++..++++++.+.
T Consensus 206 ~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 282 (361)
T 3ftb_A 206 CLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKAKQNPW--NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEE 282 (361)
T ss_dssp SEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHTTSCTT--CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHhhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5588999999998555 3467777 8889988887655433 45666555555444 34555666777888899999
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 494 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~ 494 (532)
|+++|++..+..| .|+++++.+++ .....+.+.|...++.++.|..+.
T Consensus 283 l~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~~------------- 330 (361)
T 3ftb_A 283 LNKIGFIKRVFSP-----------------HANFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNFI------------- 330 (361)
T ss_dssp HHHSSSEEEEECC-----------------SSSEEEEEESS--SCHHHHHHHHHTTTEECEECTTST-------------
T ss_pred HHhCCCCceecCC-----------------CCeEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccCC-------------
Confidence 9988876523322 36688999975 234556666655588877765431
Q ss_pred CHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHhh
Q 009523 495 SQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQALHA 531 (532)
Q Consensus 495 ~~~~~~~~gi~~~~IRlSvG~ed-~~dli~dL~~AL~~ 531 (532)
+..++++|||++.++ .+++++.|++.++.
T Consensus 331 --------~~~~~~iRis~~~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 331 --------GLDDSFVRFAIKDEKKNTKFLRALKGVENN 360 (361)
T ss_dssp --------TCCTTEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred --------CCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 123689999999643 36677777766554
No 54
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.94 E-value=1.5e-25 Score=231.57 Aligned_cols=282 Identities=16% Similarity=0.153 Sum_probs=201.6
Q ss_pred CCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 197 RYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
+|+++...++++++++++|.+ +.+++++|++++.+++.++ +||+|+++.|+|++... .++..|.++..++.+
T Consensus 55 ~y~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 128 (364)
T 1lc5_A 55 RYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGR----ALAQSGCEIRRWSLR 128 (364)
T ss_dssp SCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHH----HHHHTTCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHH----HHHHcCCeEEEEeCC
Confidence 445566789999999999863 5777778889999999988 78999999999998653 344568888877654
Q ss_pred C------HHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----ccc-cccCC
Q 009523 275 D------MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKA-LSLGA 339 (532)
Q Consensus 275 d------le~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~-l~~ga 339 (532)
+ ++++.+.+++ ++++|++++|+||||.+.| +++|+++|+++|+++|+|++|..+.. ... ...+.
T Consensus 129 ~~~~~~~l~~~~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 207 (364)
T 1lc5_A 129 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPH 207 (364)
T ss_dssp GGGTTCCCTTHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTT
T ss_pred cccccchhHHHHHhccC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCC
Confidence 2 3556666655 6899999999999999999 88999999999999999999864321 111 12467
Q ss_pred cEEEECCccccCCCCCcEEEEEE-eChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 415 (532)
|+++.|+||++|.+| ...|+++ +++++++.++..... ...++..++.+...++. +....++..++++++.+.|
T Consensus 208 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 284 (364)
T 1lc5_A 208 IWVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRRQQMP--WSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQAL 284 (364)
T ss_dssp EEEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHHHSCT--TCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECchhhcCCc-cceEEEEECCHHHHHHHHHhCCC--CCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998655 4568898 999999888776543 34566666666655543 4445555667788888999
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
+++|++. + +|. .|+++++.++.+ ...+.+.|...++.+..|..+.
T Consensus 285 ~~~~~~~-~-~~~----------------~g~~~~~~~~~~---~~~l~~~l~~~gi~v~~g~~~~-------------- 329 (364)
T 1lc5_A 285 CQLPLLT-V-YPG----------------RANYLLLRCERE---DIDLQRRLLTQRILIRSCANYP-------------- 329 (364)
T ss_dssp HTSTTEE-E-CCC----------------SSSEEEEEESCT---TCCHHHHHHTTTEECEECTTST--------------
T ss_pred hcCCCCE-E-CCC----------------CCeEEEEECCCc---HHHHHHHHHHCCcEEeeCcccC--------------
Confidence 8877654 2 221 356888988742 2244555545577777664421
Q ss_pred HHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~AL~ 530 (532)
+..++++|||++.+ +.+.+++.|++.++
T Consensus 330 -------~~~~~~iRis~~~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 330 -------GLDSRYYRVAIRSAAQNERLLAALRNVLT 358 (364)
T ss_dssp -------TCCTTEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred -------CCCCCEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 11357999999853 33556666666554
No 55
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.94 E-value=1.1e-25 Score=233.08 Aligned_cols=264 Identities=16% Similarity=0.220 Sum_probs=194.3
Q ss_pred hHHHHHHHHHhhhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~g------a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+++++++++++ . ++++++++|++|+..++.+++++||+|++++++|++.... ++..|.++..++
T Consensus 67 ~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~- 141 (370)
T 2z61_A 67 GILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNF----IRFLGAKPVFCD- 141 (370)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeC-
Confidence 46778888888874 2 5688888899999999999999999999999999986543 455788888888
Q ss_pred CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc----ccccc----cCCcEEEEC
Q 009523 274 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS----LGADLVLHS 345 (532)
Q Consensus 274 ~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~----~~~l~----~gaDivv~S 345 (532)
.|+++|++++++ ++++|++++|+||||.+.|++ |.++|+++|+++|+|+++..+.. ..... .+.|+++.|
T Consensus 142 ~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s 219 (370)
T 2z61_A 142 FTVESLEEALSD-KTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILING 219 (370)
T ss_dssp SSHHHHHHHCCS-SEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEE
T ss_pred CCHHHHHHhccc-CceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEec
Confidence 789999999987 799999999999999999999 99999999999999999875421 11222 367999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t-----l~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+||++|.+| ...|++++++++++.++........+.++..++.+...++. +....++..++.+.+.+.|+++ +
T Consensus 220 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 297 (370)
T 2z61_A 220 FSKLYAMTG-WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-G 297 (370)
T ss_dssp STTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred ChhccCCcc-ceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 999998555 45799999999999888766555555667666655555532 3334455567778888888875 3
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccccccCCCHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
+. +..| ..|.+++++++. ....+.+.|. ..++.+..|..+..
T Consensus 298 ~~-~~~~----------------~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~----------------- 340 (370)
T 2z61_A 298 WE-VNNP----------------IGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGS----------------- 340 (370)
T ss_dssp CB-CCCC----------------CBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCG-----------------
T ss_pred Ce-ecCC----------------CcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCC-----------------
Confidence 32 1111 134567777764 2344555553 34677666543210
Q ss_pred HhcCCCCCeEEEEecC
Q 009523 500 LKYGIMDNLVRFSFGV 515 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~ 515 (532)
-.++.+|||++.
T Consensus 341 ----~~~~~~Ri~~~~ 352 (370)
T 2z61_A 341 ----KGKNYIRISYAN 352 (370)
T ss_dssp ----GGSSBEEEECCS
T ss_pred ----CCCCEEEEEEeC
Confidence 025789999994
No 56
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.94 E-value=1.1e-25 Score=234.31 Aligned_cols=283 Identities=15% Similarity=0.174 Sum_probs=195.8
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...++++++++++ |. ++++++++|++|+..++.+++++||+|++++++|++... .++..|.++..++.
T Consensus 68 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~~ 143 (388)
T 1j32_A 68 GEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPE----MVKLAEGTPVILPT 143 (388)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH----HHHHTTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCEEEEecC
Confidence 3567777777776 32 456777777899999999999999999999999998553 34456888888764
Q ss_pred C-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-------ccccc
Q 009523 274 A-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKALS 336 (532)
Q Consensus 274 ~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-------~~~l~ 336 (532)
+ |+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ...+.
T Consensus 144 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 222 (388)
T 1j32_A 144 TVETQFKVSPEQIRQAITP-KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAAS 222 (388)
T ss_dssp CGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred CcccCCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHcc
Confidence 2 78999999987 7999999999999999976 88999999999999999999865321 11111
Q ss_pred ---cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHH
Q 009523 337 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTAL 409 (532)
Q Consensus 337 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a~ 409 (532)
.+.|+++.|+||+++++| ...|++++++++++.++..........++..++.+...++ .+....++..++++
T Consensus 223 ~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 301 (388)
T 1j32_A 223 PEAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRR 301 (388)
T ss_dssp HHHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 457899999999997665 4579999999998888776554444556665555444443 24445556667888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccccccCcc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~G~~~sl~~~pa~ 488 (532)
.+.+.|++.|++. +..|. .|.++++.++........+.+.|.. .++.+..|..+.
T Consensus 302 ~l~~~L~~~~g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------- 357 (388)
T 1j32_A 302 YMLDALNAMPGLE-CPKPD----------------GAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG------- 357 (388)
T ss_dssp HHHHHHHTCTTCB-CCCCC----------------BTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT-------
T ss_pred HHHHHHhhCCCCc-ccCCC----------------eeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC-------
Confidence 8888998876553 21111 2345666664200123445555432 466666553211
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
.++.+|||++. ++.++.++.|.++++
T Consensus 358 ----------------~~~~iRis~~~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 358 ----------------ADDCIRLSYATDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp ----------------CTTBEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ----------------CCCcEEEEecCCHHHHHHHHHHHHHHHH
Confidence 14689999984 223344455555554
No 57
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.94 E-value=5.3e-25 Score=229.62 Aligned_cols=271 Identities=14% Similarity=0.133 Sum_probs=189.7
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+|++++++++ |. ++++++++|++|+.+++.+++++||+|+++.|+|.+... .++..|.++..++.
T Consensus 69 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~ 144 (385)
T 1b5p_A 69 GIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPE----MVRFAGGVVVEVET 144 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEeec
Confidence 3567788888776 32 456777777899999999999999999999999987553 34556888877764
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccccc--
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL-- 337 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~~-- 337 (532)
.|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.... .....+
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 223 (385)
T 1b5p_A 145 LPEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP 223 (385)
T ss_dssp CGGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT
T ss_pred CcccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC
Confidence 378999999987 6999999999999999987 78899999999999999999875422 111222
Q ss_pred CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-------HHHHHHHHHHHHHHH
Q 009523 338 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-------TLHLRVQQQNSTALR 410 (532)
Q Consensus 338 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-------tl~~r~~~~~~~a~~ 410 (532)
+.++++.|+||.+|.+| ...|++++++++++.++..........+....+.+...++ .+....++..++++.
T Consensus 224 ~~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 302 (385)
T 1b5p_A 224 EHTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDL 302 (385)
T ss_dssp TTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHH
Confidence 56899999999998665 4579999999999888776554433455555544433442 233444555567777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.|+++ ++. +..|. .|.++++.++........+.+.|...++.+..|..+
T Consensus 303 l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f---------- 354 (385)
T 1b5p_A 303 LLEGLTAL-GLK-AVRPS----------------GAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDF---------- 354 (385)
T ss_dssp HHHHHHHH-TCC-BCCCS----------------BTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGG----------
T ss_pred HHHHHHHC-CCe-ecCCC----------------eeEEEEEecCCCCCCHHHHHHHHHHCCeEEeccccc----------
Confidence 88888765 332 21111 244677777521012345555555557777766432
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGVEDFED 520 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~ed~~d 520 (532)
+. ++++|||++. +.++
T Consensus 355 ------------~~-~~~iRis~~~-~~~~ 370 (385)
T 1b5p_A 355 ------------AA-FGHVRLSYAT-SEEN 370 (385)
T ss_dssp ------------TC-TTEEEEECCS-CHHH
T ss_pred ------------CC-CCeEEEEecC-CHHH
Confidence 11 4689999993 4444
No 58
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.94 E-value=3e-25 Score=230.17 Aligned_cols=272 Identities=16% Similarity=0.127 Sum_probs=195.9
Q ss_pred CCCc-hhHHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 197 RYGN-PTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 197 R~~~-p~~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
+|+. +...+|++++++++ |. + +++++++|++|+.+++.+++++||+|+++.|+|++.... +...|.
T Consensus 58 ~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~ 133 (376)
T 2dou_A 58 GYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGA----ARVASL 133 (376)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHH----HHHcCC
Confidence 4555 46788999999987 75 3 577777778999999999999999999999999986543 445688
Q ss_pred EEEEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccc
Q 009523 267 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKA 334 (532)
Q Consensus 267 ~v~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~ 334 (532)
++..++. .|+++|++++++ ++++|++++|+||||.+.| +++|+++|+++|+++|+|++|..... ...
T Consensus 134 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 212 (376)
T 2dou_A 134 RTFLIPLREDGLADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSP 212 (376)
T ss_dssp EEEEECBCTTSSBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCG
T ss_pred EEEEeeCCCCCCCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCh
Confidence 8887764 378889888876 6999999999999999987 57888999999999999999765321 112
Q ss_pred cc----cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHH
Q 009523 335 LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNS 406 (532)
Q Consensus 335 l~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~ 406 (532)
.. .+.++++.|+||.+|.+| ...|++++++++++.++......+...++..++.+...++. +....++..+
T Consensus 213 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 291 (376)
T 2dou_A 213 LALPGAKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRE 291 (376)
T ss_dssp GGSTTGGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred hhcCCCCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 22 256799999999998555 45789999999999888766655545566665555555543 3344455567
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
+++.+.+.|+++ + .+..|. .|.+++++++.+ .....+.+.|...++.+..|..+. +
T Consensus 292 ~~~~l~~~L~~~--~-~~~~~~----------------~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~f~----~ 347 (376)
T 2dou_A 292 RALGMAEALKGV--L-SLLPPR----------------ATMYLWGRLPEG-VDDLEFGLRLVERGVALAPGRGFG----P 347 (376)
T ss_dssp HHHHHHHHHTTT--S-EECCCC----------------BSSEEEEECCTT-CCHHHHHHHHHHTTEECEEGGGGC----G
T ss_pred HHHHHHHHHHHh--c-CccCCC----------------eeEEEEEECCCC-CCHHHHHHHHHHCCEEEcCchhhC----C
Confidence 778888888775 3 232221 355788998742 123455555544477776664321 0
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
..++.+|||++.
T Consensus 348 -----------------~~~~~~Ris~~~ 359 (376)
T 2dou_A 348 -----------------GGKGFVRIALVR 359 (376)
T ss_dssp -----------------GGTTEEEEECCS
T ss_pred -----------------CCCCeEEEEecC
Confidence 025789999987
No 59
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.94 E-value=3.2e-25 Score=231.58 Aligned_cols=285 Identities=12% Similarity=0.038 Sum_probs=198.2
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 203 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----g----a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
..++++++++++ | .++++++++|++|+.+++.+++++||+|+++.|+|++.... +...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMA----IKNQERKIIECELL 143 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH----HHTTTCEEEECCCE
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHH----HHHcCCEEEecccc
Confidence 667888888764 5 24678888888999999999999999999999999986543 3456788777754
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----ccccc--
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS-- 336 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~-- 336 (532)
.|+++|++++++.++++|++++|+||||.+.| +++|+++|+++|+++|+|++|..... .....
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSID 223 (399)
T ss_dssp EETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred cCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcC
Confidence 47999999998337999999999999999999 88999999999999999999875321 11111
Q ss_pred ---cCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCC-CccHHHHHHHHHhHH----HHHHHHHHHHHH
Q 009523 337 ---LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMK----TLHLRVQQQNST 407 (532)
Q Consensus 337 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~-~~~~~~a~l~l~~l~----tl~~r~~~~~~~ 407 (532)
.+.++++.|+||.++.+| ...|+++++ +++++.++......+. +.++..++.+...++ .+....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (399)
T 1c7n_A 224 EQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKN 302 (399)
T ss_dssp HHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 356799999999998555 356888886 5788888776555432 456665555544443 244444556677
Q ss_pred HHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCccccccc
Q 009523 408 ALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 408 a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~ 485 (532)
++.+.+.|++ +|++.. ..| ..+.+++++++........+.+.|. ..++.+..|..+.
T Consensus 303 ~~~l~~~L~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---- 361 (399)
T 1c7n_A 303 QRIVKDFFEVNHPEIKA-PLI----------------EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFG---- 361 (399)
T ss_dssp HHHHHHHHHHHCTTSBC-CCC----------------SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGC----
T ss_pred HHHHHHHHHhhCCCCeE-ecC----------------CceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccC----
Confidence 8888888887 666531 111 1244567888631012345666663 5577666654321
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 530 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~ 530 (532)
+ ..++.||||++.. +.++.++.|.++++
T Consensus 362 ~-----------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 362 D-----------------GGIGFERINLAAPSSVIQESLERLNKALK 391 (399)
T ss_dssp G-----------------GGTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred C-----------------CCCCeEEEEeccCHHHHHHHHHHHHHHHH
Confidence 0 0257899999975 23344445555544
No 60
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=1.7e-25 Score=232.96 Aligned_cols=260 Identities=15% Similarity=0.174 Sum_probs=194.0
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
|+++..+...+||+++++++|.++.++++||++|+.+++.++ +++||+|+++.++|+++... +...|+++++++.
T Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~----~~~~g~~~~~v~~ 107 (388)
T 1b9h_A 32 WWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQA----AQRLGAVTVPVDV 107 (388)
T ss_dssp CBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECB
T ss_pred eeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHHH----HHHcCCEEEEEec
Confidence 455677889999999999999988999999999999999999 89999999999999987643 4556888888764
Q ss_pred C------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---cccccCCcEEEE
Q 009523 274 A------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALSLGADLVLH 344 (532)
Q Consensus 274 ~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~---~~l~~gaDivv~ 344 (532)
+ |+++|++++++ ++++|+ |+||||.+.|+++|.++|+++|+++|+|++++.+... ....++ |+++.
T Consensus 108 ~~~~~~~d~~~l~~~i~~-~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~ 182 (388)
T 1b9h_A 108 DAATYNLDPEAVAAAVTP-RTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATF 182 (388)
T ss_dssp CTTTCCBCHHHHHHHCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEE
T ss_pred CCCcCCCCHHHHHHhcCc-CceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEE
Confidence 2 79999999987 699888 8999999999999999999999999999999865432 122233 67777
Q ss_pred CCc--cccCCCCCcEEEEEEeChH-H--HHHHHHHhhh-------------cCC--CccHHHHHHHHHhHHHHHHHHHHH
Q 009523 345 SAT--KFIGGHNDVLAGSISGSGK-L--VTQIRNLHHV-------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQ 404 (532)
Q Consensus 345 S~s--K~lgg~gd~~gG~lv~~~~-l--i~~l~~~~~~-------------~G~--~~~~~~a~l~l~~l~tl~~r~~~~ 404 (532)
|+| |+++|+ .+|+++++++ + ++.++..... .|. .+++..++++...++.+..++++.
T Consensus 183 S~s~~K~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~ 259 (388)
T 1b9h_A 183 SFQNGKLMTAG---EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVR 259 (388)
T ss_dssp ECCTTSSSCSS---SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHH
T ss_pred EccCCCcccCC---CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 766 777664 3788888775 5 5665543210 022 256676666666777777777888
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCC
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G 477 (532)
.++++++.+.|+++|++. +..+.-... ...+.+++|.+++. ......+.+.|...++.++.|
T Consensus 260 ~~~~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~ 322 (388)
T 1b9h_A 260 DERWTLLSRLLGAIDGVV-PQGGDVRAD----------RNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAA 322 (388)
T ss_dssp HHHHHHHHHHHHTSTTCE-ECCCCTTCC----------BCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHhccCCCcc-ccCCCcCCC----------ccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccc
Confidence 888999999999887764 222110000 11367899999752 234566777776567777654
No 61
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=6.4e-26 Score=234.65 Aligned_cols=302 Identities=16% Similarity=0.148 Sum_probs=206.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
.++...+|+++++++++.+++++++||++|+..++.++ +++||+|+++.++|+++.. .+...|+++.+++.+
T Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~ 111 (374)
T 3uwc_A 36 LGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVG----AIVQAGATPVLVDSENGY 111 (374)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHH----HHHHTTCEEEEECBCTTS
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCC
Confidence 57889999999999999999999999999999999999 9999999999999998654 345678899888865
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--CcEEEECCc--c
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT--K 348 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aDivv~S~s--K 348 (532)
|+++|++++++ ++++|+ |+||||.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|+| |
T Consensus 112 ~~d~~~l~~~~~~-~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K 187 (374)
T 3uwc_A 112 VIDPEKIEAAITD-KTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLK 187 (374)
T ss_dssp SBCGGGTGGGCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSS
T ss_pred CcCHHHHHHhCCC-CceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCC
Confidence 89999999987 799888 8999999999999999999999999999998865433333333 799999977 9
Q ss_pred ccCCCCCcEEEEEEeCh-HHHHHHHHHhhh------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGSG-KLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~-~li~~l~~~~~~------------~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L 415 (532)
++++++. +|++++++ ++.+.++..... ....+.+..+.+....++.+....++..++++++.+.|
T Consensus 188 ~l~~~g~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 188 NLNVWSD--AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp SSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccce--eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998553 78887654 676776654321 11224566666555555556666677778888888888
Q ss_pred HhCCC-ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccc---
Q 009523 416 EAHPK-VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY--- 491 (532)
Q Consensus 416 ~~~p~-v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~--- 491 (532)
++.+. +. .|..+.... ..-..+.+... + ...+.+.|...++.++.|....+.+.|.....
T Consensus 266 ~~~~~~~~---~~~~~~~~~---------~~~~~~~~~~~-~---~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~ 329 (374)
T 3uwc_A 266 VDLSEFID---VPVRREGVY---------HVFHIYVLRVK-Y---RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQ 329 (374)
T ss_dssp GGGTTTEE---CCCCCTTEE---------CCCSSEEEEET-T---HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCC
T ss_pred ccCCCeEE---eccCCCCCc---------eeeEEEEEEcC-C---HHHHHHHHHHCCCccccCCCCccccChhhhhcCCc
Confidence 87765 42 222111000 00012334333 2 34455555555777776643333333322110
Q ss_pred -cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 492 -WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 492 -~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..++... .+..+.|||+++...+++.++.+.++|+
T Consensus 330 ~~~~~~~~----~~~~~~lrl~~~~~~t~edi~~~~~~l~ 365 (374)
T 3uwc_A 330 QGDFPMAE----KHGEAVITLPAHPYLTEEEINYIIKKVR 365 (374)
T ss_dssp TTSCHHHH----HHHHHEEEECCCTTSCHHHHHHHHHHHH
T ss_pred cCCCccHH----HHHhCEEEccCCCCCCHHHHHHHHHHHH
Confidence 0111111 1123689999987666555555555554
No 62
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=3.3e-25 Score=231.53 Aligned_cols=264 Identities=17% Similarity=0.185 Sum_probs=190.0
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...++++++++++ |. ++++++++|++|+..++.+++++||+|++++++|++.... ++..|.++..++.
T Consensus 79 g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 154 (389)
T 1o4s_A 79 GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQ----IILAGGTVNVVET 154 (389)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEec
Confidence 4678888888877 53 4677778888999999999999999999999999986543 3456888877754
Q ss_pred C-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccccc---
Q 009523 274 A-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--- 336 (532)
Q Consensus 274 ~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~--- 336 (532)
+ |+++|++++++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|+.+.. .....
T Consensus 155 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 233 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSE 233 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCS
T ss_pred CCccCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCC
Confidence 2 78999999987 7999999999999999988 88999999999999999999875432 11111
Q ss_pred -cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHH
Q 009523 337 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-LHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 337 -~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t-l~~r~~~~~~~a~~la~~ 414 (532)
.+.|+++.|+||++|.+| ...|++++++++++.++..........++..++.+...++. +....++..++++.+.+.
T Consensus 234 ~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~ 312 (389)
T 1o4s_A 234 GFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVER 312 (389)
T ss_dssp SSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 368999999999998554 45799999999988887765544444566655555544432 333445566778888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccccccC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWD 493 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~ 493 (532)
|++. ++. +..| ..|.++++.++. ....+.+.|. ..++.+..|..+
T Consensus 313 L~~~-g~~-~~~~----------------~~~~~~~~~~~~---~~~~l~~~l~~~~gi~v~~g~~f------------- 358 (389)
T 1o4s_A 313 LKKM-GVK-FVEP----------------EGAFYLFFKVRG---DDVKFCERLLEEKKVALVPGSAF------------- 358 (389)
T ss_dssp HHHT-TCC-CCCC----------------SBSSEEEEECSS---CHHHHHHHHHHHHCEECEEGGGG-------------
T ss_pred HHhc-CCe-eecC----------------CcceEEEEeCCC---CHHHHHHHHHHHCCEEEeCchhc-------------
Confidence 8875 332 1111 135577888751 2334555543 446666555332
Q ss_pred CCHHHHHhcCCCCCeEEEEecC
Q 009523 494 LSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
+. ++.+|||++.
T Consensus 359 ---------~~-~~~~Ris~~~ 370 (389)
T 1o4s_A 359 ---------LK-PGFVRLSFAT 370 (389)
T ss_dssp ---------TC-TTEEEEECCS
T ss_pred ---------CC-CCeEEEEEeC
Confidence 11 3689999996
No 63
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=4.2e-25 Score=228.94 Aligned_cols=302 Identities=17% Similarity=0.205 Sum_probs=217.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
.++...++|+++++++|.+++++++||++|+..++.++ +++||+|+++.++|+++... +...|.++++++.+
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~----~~~~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAET----VALLGAKPVYVDIDPRT 108 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHH----HHHcCCEEEEEecCCcc
Confidence 57889999999999999999999999999999999999 89999999999999987644 34568888888743
Q ss_pred ---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCC--cEEEECC--c
Q 009523 275 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVLHSA--T 347 (532)
Q Consensus 275 ---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~ga--Divv~S~--s 347 (532)
|+++|++++++ ++++|+ |+||+|...|+++|.++|+++|+++|+|++++.+........+. |+++.|+ +
T Consensus 109 ~~~d~~~l~~~i~~-~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~ 184 (367)
T 3nyt_A 109 YNLDPQLLEAAITP-RTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPS 184 (367)
T ss_dssp CSBCGGGTGGGCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCcCHHHHHHhcCc-CCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCC
Confidence 78999999987 799888 78899999999999999999999999999987654444333444 9999996 8
Q ss_pred cccCCCCCcEEEEEEe-ChHHHHHHHHHhhh------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~-~~~li~~l~~~~~~------------~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~ 414 (532)
|++++.|. +|+++. ++++.+.++..... ++..+++..+++++..++.+....++..++++++.+.
T Consensus 185 K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~ 262 (367)
T 3nyt_A 185 APLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLS 262 (367)
T ss_dssp SSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998663 788887 46777777664431 2345678888887878887777778888888999999
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccc-cccC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM-SYWD 493 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~-s~~~ 493 (532)
|++.+ + ..|..+... .....++.+.++ + ...+.+.|+..++.++.+....+...|... ....
T Consensus 263 L~~~~-~---~~~~~~~~~---------~~~~~~~~~~~~-~---~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~ 325 (367)
T 3nyt_A 263 LKQVG-I---GTPFIEVNN---------ISVYAQYTVRMD-N---RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAK 325 (367)
T ss_dssp HHHTT-C---CCCCCCTTE---------ECCCSSEEEECS-S---HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCC
T ss_pred hccCC-e---eccCCCCCC---------ceeeEEEEEEeC-C---HHHHHHHHHHCCCceeccCCCccccChhhhccCCC
Confidence 98864 2 122211100 001224455554 2 234455555446666655332232333321 1111
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 494 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
++..+. +.++.|||+++...+++.++.+.+++.+
T Consensus 326 ~~~~~~----~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 326 LPVGDK----AATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp CHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred ChHHHH----HHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 222111 2356899999998888888888888764
No 64
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.94 E-value=2.3e-25 Score=235.56 Aligned_cols=295 Identities=16% Similarity=0.147 Sum_probs=205.0
Q ss_pred CCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhc--cCCC--EEEEcCCCCcchHHHHHHhccc
Q 009523 197 RYGNPT-TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALV--PAGG--HIVTTTDCYRKTRIFIETVLPK 263 (532)
Q Consensus 197 R~~~p~-~~~Le~~lA~l~g--------a~~~i~~sSG~~Ai~~al~all--~~Gd--~VIv~~~~y~~t~~~~~~~l~~ 263 (532)
+|+.+. ..+++++++++++ .++++++++|++|+.+++.+++ ++|| +|+++.++|.+.... +..
T Consensus 77 ~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~----~~~ 152 (437)
T 3g0t_A 77 IYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQ----CRI 152 (437)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHH----HHH
T ss_pred CCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHH----HHH
Confidence 344443 4788888888876 3467777888899999999998 9999 999999999986543 344
Q ss_pred CCcEEEEeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 264 MGITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 264 ~Gv~v~~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
.|.++..++.+ |+++|+++++..++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+....
T Consensus 153 ~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~ 232 (437)
T 3g0t_A 153 LGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD 232 (437)
T ss_dssp HTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC
T ss_pred cCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC
Confidence 57777777643 7899999994337999999999999999997 66789999999999999999864211
Q ss_pred --c-------ccc--ccCCcEEEECCccccCCCCCcEEEEEEeChHHHH-H-----------------HHHHhhhcCCCc
Q 009523 332 --Q-------KAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-Q-----------------IRNLHHVLGGAL 382 (532)
Q Consensus 332 --~-------~~l--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~-----------------l~~~~~~~G~~~ 382 (532)
. ..+ ..+.++++.|+||.++.+| ...|++++++++++ . +...........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T 3g0t_A 233 YSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGA 311 (437)
T ss_dssp CCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSS
T ss_pred cCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCC
Confidence 1 111 2467799999999998554 45789999998888 7 655544444456
Q ss_pred cHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 383 NPNAAYLIIRGMKT-------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 383 ~~~~a~l~l~~l~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
++..++.+...++. +..+.++..++++.+.+.|+++ ++. +.+|.-...| ...|.++++.+++
T Consensus 312 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~---------~~~~~~~~~~~~~ 380 (437)
T 3g0t_A 312 THSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFN-IVYDKDGNEP---------LADGFYFTVGYKG 380 (437)
T ss_dssp CHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE-ESSCEETTEE---------CCSSSEEEEEETT
T ss_pred CHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE-EeccccCCCC---------CceeEEEEEecCC
Confidence 66666666555554 4455666778888889999887 442 3211000000 0146688999873
Q ss_pred CHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHh
Q 009523 456 DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALH 530 (532)
Q Consensus 456 ~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~---ed~~dli~dL~~AL~ 530 (532)
.....+.+.|...++.+..|..+.. ..++.+|||++. ++.+.+++.|.++++
T Consensus 381 --~~~~~l~~~L~~~gi~v~~~~~~~~---------------------~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 381 --MDSSKLIEKFVRYGMCAITLKTTGS---------------------KRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp --CCHHHHHHHHHHTTEECEESTTTTC---------------------CCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHcCeEEeeccccCC---------------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 2344555665555777766543210 013789999995 445666666666554
No 65
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=2.7e-25 Score=231.77 Aligned_cols=282 Identities=15% Similarity=0.120 Sum_probs=197.7
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC
Q 009523 203 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 274 (532)
Q Consensus 203 ~~~Le~~lA~l~g--------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~ 274 (532)
..+++++++++++ .++++++++|++|+.+++.+++++||+|+++.++|.+... .++..|+++..++.+
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~~~ 145 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQ----ILRALGLVPVDLPTA 145 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH----HHHHTTCEEEEEECC
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEeecC
Confidence 5678888888763 2568888888999999999999999999999999988653 345568888887653
Q ss_pred -------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccccc-cCC
Q 009523 275 -------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS-LGA 339 (532)
Q Consensus 275 -------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~-~ga 339 (532)
|+++|+++ ++++|++++|+||||.+.| +++|+++|+++|+++|+|++|+.... ..... .+.
T Consensus 146 ~~~~~~~d~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 221 (391)
T 3h14_A 146 PENRLQPVPADFAGL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE 221 (391)
T ss_dssp GGGTTSCCHHHHTTS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSS
T ss_pred cccCCCCCHHHHHhc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCC
Confidence 77777765 5899999999999999998 78899999999999999999875321 12222 246
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR---GMKTLHLRVQQQNSTALRMAKILE 416 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~---~l~tl~~r~~~~~~~a~~la~~L~ 416 (532)
++++.|+||.+|.+| ...|++++++++++.++......+.+.++..++.+.. ..+.+..+.++..++++.+.+.|+
T Consensus 222 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 300 (391)
T 3h14_A 222 CYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLP 300 (391)
T ss_dssp SEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEechhccCCcc-ceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999998555 4578999999999988877666666666665554433 334555666677788888888888
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccccccCccccccCCC
Q 009523 417 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 417 ~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
+++.+ .+..|. .+.++++.++........+.+.|.. .++.++.|..+..
T Consensus 301 ~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------------- 350 (391)
T 3h14_A 301 KAGFT-RIAPPD----------------GAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP------------- 350 (391)
T ss_dssp HHTCC-CBCCCC----------------BTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT-------------
T ss_pred HcCCC-cccCCC----------------eeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC-------------
Confidence 76432 111111 3457788886311233445555332 3677777654321
Q ss_pred HHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~ 530 (532)
+..++.||||++.. +.++.++.|.++++
T Consensus 351 -------~~~~~~iRis~~~~~~~i~~~l~~l~~~~~ 380 (391)
T 3h14_A 351 -------ERGAGTLRFSYARATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp -------TTGGGEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 01257999999982 23334455555544
No 66
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.94 E-value=3.4e-25 Score=234.02 Aligned_cols=296 Identities=16% Similarity=0.137 Sum_probs=204.8
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhhC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 191 ASFEYGRYGNPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 191 ~~~~Y~R~~~p~~~~Le~~lA~l~g--a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
..+.|+....+..+++++.+++.+| . +.++++++|++|+..++++++++||+|++..+.|++.... +...|.
T Consensus 90 ~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~----~~~~g~ 165 (421)
T 3l8a_A 90 HIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFART----IRLNDH 165 (421)
T ss_dssp CCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHH----HHHTTE
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHH----HHHCCC
Confidence 3577877777778888888888877 2 4577788888999999999999999999999999986543 344577
Q ss_pred EEEEeCC--------CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc---CHHHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 267 TATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 267 ~v~~vd~--------~dle~Le~al~~~~tklV~lesP~NptG~v~---dl~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
++..++. .|+++|++++++.++++|++++|+||+|.+. ++++|+++|+++|+++|+||+|.....
T Consensus 166 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~ 245 (421)
T 3l8a_A 166 RLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT 245 (421)
T ss_dssp EEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred EEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 7776653 3899999999833799999999999999994 588999999999999999999764321
Q ss_pred -ccccc-----cCCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcCC-CccHHHHHHHHHhHH----HHHH
Q 009523 332 -QKALS-----LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMK----TLHL 399 (532)
Q Consensus 332 -~~~l~-----~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~-~~~~~~a~l~l~~l~----tl~~ 399 (532)
..... .+.++++.|++|.+|.+| ...|+++.+ +++.+.++......+. ..++..+..+...++ .+..
T Consensus 246 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~ 324 (421)
T 3l8a_A 246 HHSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEE 324 (421)
T ss_dssp CCCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred CccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHH
Confidence 11111 245699999999998555 457888887 7888888765533332 456665555444443 2455
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCC
Q 009523 400 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGG 478 (532)
Q Consensus 400 r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~ 478 (532)
..++..++.+++.+.|+++|++..+. |. .+.++|++++........+.+.| +..++.++.|.
T Consensus 325 ~~~~~~~~~~~l~~~L~~~~~i~~~~-~~----------------~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~ 387 (421)
T 3l8a_A 325 LKTVIEGNIKLVIKELEAKTKIKVME-PE----------------GTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGA 387 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCEEEC-CS----------------BSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEeC-CC----------------eeEEEEEeccccCCCHHHHHHHHHHhCCEEEECch
Confidence 55666778888888888777665432 21 23456688763101233445555 34577777665
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 529 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL 529 (532)
.+.. ..++.|||+++.. +.++.++.|.+++
T Consensus 388 ~f~~---------------------~~~~~iRi~~~~~~~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 388 HFGK---------------------EGKYFARLNVATPKNTVQEALSRIISVF 419 (421)
T ss_dssp GGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred hhCC---------------------CCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 4320 1268999999952 2333444444444
No 67
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.94 E-value=3.4e-25 Score=227.54 Aligned_cols=282 Identities=10% Similarity=0.085 Sum_probs=206.1
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.+|+++...+|++++|+++|.+ +++++++|++|+.+++.++. ||+|+++.|+|.+.. ..++..|.++..++
T Consensus 44 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~----~~~~~~g~~~~~v~ 117 (350)
T 3fkd_A 44 IRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYE----DACRMYEHEVCFYP 117 (350)
T ss_dssp GGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHH----HHHHHTTCEEEEEE
T ss_pred HhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHH----HHHHHcCCeEEEEe
Confidence 45566666689999999999973 67777777899999999887 999999999998855 34556789999888
Q ss_pred C-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC-CEEEEECCCCCCCccc------ccccCCcEEEE
Q 009523 273 P-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQK------ALSLGADLVLH 344 (532)
Q Consensus 273 ~-~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g-i~lIvDet~a~~~~~~------~l~~gaDivv~ 344 (532)
. ++.+.+.. + ++++|++++|+||||.++|++++.++++.++ .++|+|++|....... ....+.++++.
T Consensus 118 ~~~~~~~~~~---~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (350)
T 3fkd_A 118 SNEDIGEADF---S-NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVY 193 (350)
T ss_dssp TTSCGGGSCC---T-TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEE
T ss_pred cCCccccCcc---C-CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEe
Confidence 7 44333321 3 6999999999999999999999999998875 7999999986532211 11235669999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCc
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v 421 (532)
|+||.++.+| ...|++++++++++.++..... ...++..++.+...++.. ..++++..++++++.+.|+++|++
T Consensus 194 S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 194 SFSHAYGIPG-LRIGYIVANKDFMKRVAAFSTP--WAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGV 270 (350)
T ss_dssp ESHHHHSCGG-GCCEEEECCHHHHHHHHTTCCT--TCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTE
T ss_pred cCchhccCcc-hheEeEEeCHHHHHHHHHhCCC--CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999998554 4578999999999988776543 345667666666666542 244555568888999999988776
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccccccCccccccCCCHHHHH
Q 009523 422 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 422 ~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
. + +|. .|+++++.++.. ....+.+.|.. .++.++.|..+.
T Consensus 271 ~-~-~~~----------------~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~~g~~f~------------------- 311 (350)
T 3fkd_A 271 E-V-HPS----------------GTTFFLLRLKKG--TAAELKKYMLEEYNMLIRDASNFR------------------- 311 (350)
T ss_dssp E-E-CCC----------------SSSEEEEEESSS--CHHHHHHHHHHTTCEECEECTTST-------------------
T ss_pred E-E-CCC----------------CCcEEEEECCCC--CHHHHHHHHHHHCCEEEEeCccCC-------------------
Confidence 4 2 232 366888999753 34566666665 688888775531
Q ss_pred hcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009523 501 KYGIMDNLVRFSFGVE-DFEDLKADVLQALH 530 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~e-d~~dli~dL~~AL~ 530 (532)
+..+++||||++.+ +.+++++.|++.++
T Consensus 312 --~~~~~~iRis~~~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 312 --GLDESYVRITTQRPAQNQLFIKALETFLE 340 (350)
T ss_dssp --TCCTTEEEEECCCHHHHHHHHHHHHHHHT
T ss_pred --CCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 12368999999963 34566666666654
No 68
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.94 E-value=5.4e-25 Score=229.55 Aligned_cols=289 Identities=16% Similarity=0.149 Sum_probs=201.9
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccC----------CCEEEEcCCCCcchHHHHHHhc
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA----------GGHIVTTTDCYRKTRIFIETVL 261 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~----------Gd~VIv~~~~y~~t~~~~~~~l 261 (532)
.+.+..+.++..+++++++++++|.+++++++||++|+..++..+..+ ||+|++..++|++.........
T Consensus 69 ~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 148 (392)
T 3ruy_A 69 TLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMS 148 (392)
T ss_dssp SCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTC
T ss_pred cccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhcc
Confidence 344455778999999999999999888999999999999999877654 6799999999987543322211
Q ss_pred cc---------CCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCC
Q 009523 262 PK---------MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 262 ~~---------~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~ 328 (532)
.. ....+..++.+|+++|++++++ ++++|++++|+||||.+.| +++|.++|++||+++|+|+++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 227 (392)
T 3ruy_A 149 SNEEYKRGFGPMLPGIIVIPYGDLEALKAAITP-NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTG 227 (392)
T ss_dssp SCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCT-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTT
T ss_pred CChhhccccCCCCCCCeeeCcccHHHHHHHhcc-CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC
Confidence 11 1123566677799999999986 7999999999999999998 99999999999999999999853
Q ss_pred C------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HH
Q 009523 329 P------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LR 400 (532)
Q Consensus 329 ~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r 400 (532)
. ..........|+++ +||.++| |...+|++++++++++.+...........++..++.+...++.+. ..
T Consensus 228 ~~~~g~~~~~~~~~~~~d~~~--~SK~l~g-G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 304 (392)
T 3ruy_A 228 LGRTGKVFACDWDNVTPDMYI--LGKALGG-GVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKL 304 (392)
T ss_dssp TTTTSSSSGGGGGTCCCSEEE--ECGGGGT-TTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred CCccccchhhhccCCCCCEEE--EchhhhC-ChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 2 11222334568775 5699987 324579999999888776654443444567777777766666553 33
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009523 401 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 480 (532)
Q Consensus 401 ~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~ 480 (532)
.++..++++++.+.|++... |.+. ...+.|+++++.+++ ....+.+.|...++.++.|+
T Consensus 305 ~~~~~~~~~~l~~~L~~~~~------~~~~----------~~~~~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~-- 363 (392)
T 3ruy_A 305 TERSLQLGEKLVGQLKEIDN------PMIT----------EVRGKGLFIGIELNE---PARPYCEQLKAAGLLCKETH-- 363 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCC------TTEE----------EEEEETTEEEEEESS---CSHHHHHHHHTTTEECCCBT--
T ss_pred HHHHHHHHHHHHHHHHHhcC------CCce----------EEEeeeeEEEEEEcc---hHHHHHHHHHHCCcEEecCC--
Confidence 44555677777777776421 1110 012247789998875 23456666665666655431
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
++.|||+++...+++.++.+.++|+
T Consensus 364 -------------------------~~~iRi~~~~~~~~~~i~~~~~~l~ 388 (392)
T 3ruy_A 364 -------------------------ENVIRIAPPLVISEEDLEWAFQKIK 388 (392)
T ss_dssp -------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred -------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4789999776544444444444443
No 69
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.94 E-value=4.8e-25 Score=231.79 Aligned_cols=284 Identities=10% Similarity=0.061 Sum_probs=199.0
Q ss_pred hhHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 201 PTTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 201 p~~~~Le~~lA~l~----ga-----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+...+|++++++++ |. ++++++++|++|+.+++.+++++||+|+++.|.|++.... +...|.++..+
T Consensus 85 ~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v 160 (404)
T 2o1b_A 85 HGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAG----VLLADGKPVPL 160 (404)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHH----HHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHCCCEEEEe
Confidence 34677888888887 75 3567777778999999999999999999999999986643 34567777776
Q ss_pred CC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccccc-
Q 009523 272 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL- 337 (532)
Q Consensus 272 d~------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~~- 337 (532)
+. .|+++|++++++ ++++|++++|+||||.+.| +++|+++|+++|+++|+|++|..... ......
T Consensus 161 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 239 (404)
T 2o1b_A 161 NLEPPHYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASE 239 (404)
T ss_dssp ECCTTTCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGST
T ss_pred ccCcccCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcC
Confidence 53 367889888876 6999999999999999996 67899999999999999999875421 112222
Q ss_pred ---CCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009523 338 ---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 410 (532)
Q Consensus 338 ---gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~ 410 (532)
+.|+++.|+||++|.+| ...|++++++++++.++..........++..++.+...++. +....++..++++.
T Consensus 240 ~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 318 (404)
T 2o1b_A 240 NGKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDR 318 (404)
T ss_dssp THHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 45799999999998554 45789999999999888766555555666666665555544 33444555677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~ 489 (532)
+.+.|+++ ++. +..|. .|.++++.++.+ .....+.+.|. ..++.+..|..+..
T Consensus 319 l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~------- 372 (404)
T 2o1b_A 319 FEAMLAKA-DLP-FVHAK----------------GGIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGE------- 372 (404)
T ss_dssp HHHHHHHT-TCC-EECCC----------------BSSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCG-------
T ss_pred HHHHHHhc-CCe-ecCCC----------------cceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCc-------
Confidence 88888876 443 22121 244688888632 12334454432 34666666644210
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
..++.+|||++. ++.++.++.|.++++
T Consensus 373 --------------~~~~~iRis~~~~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 373 --------------NGNRYVRISLALDDQKLDEAAIRLTELAY 401 (404)
T ss_dssp --------------GGTTEEEEECCSCTTHHHHHHHHHHGGGG
T ss_pred --------------CCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 025789999996 234444555555544
No 70
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=2.9e-25 Score=232.47 Aligned_cols=289 Identities=11% Similarity=0.081 Sum_probs=201.9
Q ss_pred chhHHHHHHHHHhhhCCCc--EE-EeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 200 NPTTVVVEEKMSALEGAES--TV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~--~i-~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.+..+++++++++++|.+. .+ +++||++|+..++.+++++||+|+++++.|++.. +...++..|++++.++.+
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 120 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWG 120 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCC
Confidence 5668899999999999743 34 6678889999999999999999999999998732 334566778898888754
Q ss_pred ---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCcccc
Q 009523 275 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 350 (532)
Q Consensus 275 ---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK~l 350 (532)
|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. ..+....++|+++.|+||++
T Consensus 121 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l 200 (416)
T 3isl_A 121 TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCL 200 (416)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCcccc
Confidence 89999999973369999999999999999999999999999999999999987543 23444568999999999985
Q ss_pred CCCCCcEEEEEEeChHHHHHHHHHh--------------------------------------hhcCCCccHHHHHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRNLH--------------------------------------HVLGGALNPNAAYLIIR 392 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~~~--------------------------------------~~~G~~~~~~~a~l~l~ 392 (532)
+++. ..|+++.++++++.+.... ....++.+......+..
T Consensus 201 ~g~~--g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 278 (416)
T 3isl_A 201 SVPS--GMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALRE 278 (416)
T ss_dssp CCCS--SEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHH
T ss_pred CCCC--CeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHH
Confidence 5543 2688999999888776321 00112334443333333
Q ss_pred hHHH-----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc
Q 009523 393 GMKT-----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL 467 (532)
Q Consensus 393 ~l~t-----l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L 467 (532)
+++. +....++..++++++.+.|++. ++. +..|. . ...+++++|.++.+ .....+.+.|
T Consensus 279 al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~~~-~~~~~l~~~L 342 (416)
T 3isl_A 279 GVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLR-LFGDD-----S--------CKMPVVTCVEIPGG-IDGESVRDML 342 (416)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BCSCG-----G--------GBCTTEEEEECCTT-CCHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE-eccCc-----c--------ccCCcEEEEeCCCC-CCHHHHHHHH
Confidence 3332 3445566667788888888874 332 11111 0 12467899998632 2234555555
Q ss_pred CCC-ceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CC-HHHHHHHHHHHHhh
Q 009523 468 KIP-YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----ED-FEDLKADVLQALHA 531 (532)
Q Consensus 468 ~~~-~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed-~~dli~dL~~AL~~ 531 (532)
... ++.++.|.. ...++.|||+++. ++ .+++++.|.+++++
T Consensus 343 ~~~~gi~v~~g~~-----------------------~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 343 LAQFGIEIASSFG-----------------------PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp HHHHCEECBCCCS-----------------------TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEecCCC-----------------------CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 433 677666531 1236799999932 33 56666667666653
No 71
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.94 E-value=8.8e-25 Score=229.86 Aligned_cols=285 Identities=13% Similarity=0.111 Sum_probs=199.2
Q ss_pred chhHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 200 NPTTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~----ga-----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
.+...+|++++++++ |. ++++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..
T Consensus 74 ~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~ 149 (412)
T 2x5d_A 74 SRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYG----AVIAGAQVRS 149 (412)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHHHTCEEEE
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEE
Confidence 344678888888888 63 4688888889999999999999999999999999986543 3445777777
Q ss_pred eCCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----cccc
Q 009523 271 IDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKAL 335 (532)
Q Consensus 271 vd~~-------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l 335 (532)
++.+ |+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.. ....
T Consensus 150 ~~~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 228 (412)
T 2x5d_A 150 VPLVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIM 228 (412)
T ss_dssp EECSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred eecCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChh
Confidence 6543 46889999886 6999999999999999987 57899999999999999999875431 1111
Q ss_pred c----cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHH
Q 009523 336 S----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNST 407 (532)
Q Consensus 336 ~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~ 407 (532)
. .+.|+++.|+||++|.+| ...|++++++++++.++......+.+.++..++.+...++. +....++..++
T Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 307 (412)
T 2x5d_A 229 QVPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQR 307 (412)
T ss_dssp GSTTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHH
T ss_pred hccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1 367899999999998555 35789999999999888766554555667666655555543 34445556677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHc-CCCceeecCCCcccccc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGCESIVD 484 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~--~~~~~~l~~L-~~~~i~vs~G~~~sl~~ 484 (532)
++.+.+.|+++ ++. +..| ..|.++++.++.+. .....+.+.| +..++.+..|..+.
T Consensus 308 ~~~l~~~L~~~-g~~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~--- 366 (412)
T 2x5d_A 308 RDVLVKGLREA-GWM-VENP----------------KASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFG--- 366 (412)
T ss_dssp HHHHHHHHHHH-TCC-CCCC----------------SBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGC---
T ss_pred HHHHHHHHHHC-CCE-ecCC----------------CeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhC---
Confidence 78888888775 332 1111 12457888886321 0234555555 23467666664321
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009523 485 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 530 (532)
Q Consensus 485 ~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~---~dli~dL~~AL~ 530 (532)
+ ..++.||||++. +. ++.++.|.++++
T Consensus 367 -~-----------------~~~~~iRis~~~-~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 367 -D-----------------YGDDHVRFALIE-NRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp -G-----------------GGTTEEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred -C-----------------CCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 0 025789999997 33 334444555554
No 72
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.94 E-value=1.8e-24 Score=224.66 Aligned_cols=284 Identities=16% Similarity=0.145 Sum_probs=200.5
Q ss_pred CCCch-hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 197 RYGNP-TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 197 R~~~p-~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
+|+.+ ...+|+++++++++. ++++++++|++|+..++.+++++||+|+++.++|++... .++..|.++..++.
T Consensus 56 ~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~ 131 (381)
T 1v2d_A 56 QYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP----DAFLAGAKARLVRL 131 (381)
T ss_dssp SCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHcCCEEEEEeC
Confidence 34443 577899999999987 368888888999999999999999999999999998653 34556788777764
Q ss_pred C--------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccc--c
Q 009523 274 A--------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL--S 336 (532)
Q Consensus 274 ~--------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l--~ 336 (532)
+ |+++|++++++ ++++|++++|+||||.+.| +++|.++|+++|+++|+|+++..... .... .
T Consensus 132 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~ 210 (381)
T 1v2d_A 132 DLTPEGFRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFA 210 (381)
T ss_dssp EEETTEEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHC
T ss_pred CCCCccCCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhc
Confidence 3 79999999986 7999999999999999987 78999999999999999999875421 1122 3
Q ss_pred cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHHH
Q 009523 337 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 410 (532)
Q Consensus 337 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a~~ 410 (532)
.+.|+++.|+||+++.+| ...|++++++++++.++........+.++...+.+...++. +....++..+++++
T Consensus 211 ~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 289 (381)
T 1v2d_A 211 PERTFTVGSAGKRLEATG-YRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDL 289 (381)
T ss_dssp TTTEEEEEEHHHHTTCGG-GCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Confidence 478999999999998555 45789999998988887655544444555555544444443 23344556677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.|++. ++. +..|. .|.++++.+++. + . ...+...++.+..|..+.. .
T Consensus 290 l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~-~-~---~~~l~~~gi~v~~g~~~~~--~----- 339 (381)
T 1v2d_A 290 LAGGLRAM-GLR-VYVPE----------------GTYFLMAELPGW-D-A---FRLVEEARVALIPASAFYL--E----- 339 (381)
T ss_dssp HHHHHHHT-TCC-EECCS----------------BSSEEEEECTTC-C-H---HHHHHHTCEECEEGGGGCS--S-----
T ss_pred HHHHHHHC-CCE-ecCCC----------------cceEEEEecChH-h-H---HHHHHhCCEEEecchHhCC--C-----
Confidence 88888773 443 22221 355788888753 2 2 3333344666665543210 0
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHH---HHHHHHHHHH
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGVEDFE---DLKADVLQAL 529 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~ed~~---dli~dL~~AL 529 (532)
+..++.+|||++. +.+ ++++.|.+++
T Consensus 340 ------------~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l 368 (381)
T 1v2d_A 340 ------------DPPKDLFRFAFCK-TEEELHLALERLGRVV 368 (381)
T ss_dssp ------------SCCTTEEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred ------------CCCCCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 0135799999997 433 3344444443
No 73
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.94 E-value=2.7e-25 Score=228.71 Aligned_cols=255 Identities=15% Similarity=0.134 Sum_probs=185.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd--~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
++...+|+++|++++|.+..+++++|++|+..++.+++.+|| .|+++.+.|...+... ......|+++..++.
T Consensus 46 ~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 124 (357)
T 3lws_A 46 GAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQD-GLKELHPIETILVGAADRL 124 (357)
T ss_dssp ETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHSSCEEEECSCTTSC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccc-hhhhccCcEEEEecCCCCC
Confidence 588999999999999998889999999999999999999998 6777666654432110 012334888887764
Q ss_pred CCHHHHHHhhcCCCeeEEEEeCCCCCC-CcccC---HHHHHHHHHhCCCEEEEECCCCC------CCcccccccCCcEEE
Q 009523 274 ADMEGLEAALNNNNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGADLVL 343 (532)
Q Consensus 274 ~dle~Le~al~~~~tklV~lesP~Npt-G~v~d---l~~I~~la~~~gi~lIvDet~a~------~~~~~~l~~gaDivv 343 (532)
.|+++|+++. ++++|++++|+||+ |.+.+ +++|+++|++||+++|+|+++.. +.....+..+.|+++
T Consensus 125 ~d~~~l~~~~---~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~ 201 (357)
T 3lws_A 125 MTLDEIKALP---DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIY 201 (357)
T ss_dssp CCHHHHHTCC---SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEE
T ss_pred cCHHHHhcCc---CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEE
Confidence 3789998873 38999999999998 99886 88899999999999999998651 111222334578999
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCc--cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v 421 (532)
.|+||+++++. +|++++++++++.++.....++... ....+..+..+++....++++..++++++.+.|+++|++
T Consensus 202 ~s~sK~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 202 ISFYKGLGGIA---GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGV 278 (357)
T ss_dssp EESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTE
T ss_pred EeccccCCCCc---eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999996654 5999999999998887665555332 222233334556665566666778889999999998877
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCC
Q 009523 422 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 422 ~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G 477 (532)
.....|. .++++++.+++.. .....+.+.|...++.+..|
T Consensus 279 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g 319 (357)
T 3lws_A 279 HTTPEVP----------------VSNMFHLHFDGQAADISPKLEQVQEETGLGFVGY 319 (357)
T ss_dssp EEESSSC----------------SSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSC
T ss_pred eeccCCC----------------cceEEEEEecCChHHHHHHHHHHHHhcCeEEecc
Confidence 5323332 3678999997642 22456666666667777766
No 74
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=5.2e-25 Score=230.34 Aligned_cols=304 Identities=15% Similarity=0.155 Sum_probs=220.1
Q ss_pred chhHHHHHHHH-HhhhC-CCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 200 NPTTVVVEEKM-SALEG-AESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 200 ~p~~~~Le~~l-A~l~g-a~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.|...+||+++ |+++| .+++++++||++|+.+++.++ +++||+||++.++|.++... +...|+++++++.+
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~----~~~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLA----AIWCGLEPYFIDISID 110 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEecCCc
Confidence 48899999999 99999 788999999999999999998 89999999999999987643 44568999888743
Q ss_pred ----CHHHHHHhh-cCCC--eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccccccc---CCcEEEE
Q 009523 275 ----DMEGLEAAL-NNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSL---GADLVLH 344 (532)
Q Consensus 275 ----dle~Le~al-~~~~--tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~---gaDivv~ 344 (532)
|+++|++++ ++ + |++|+ |+||+|.+.|+++|.++|+ +|+++|+|++++.+........ ..|+.++
T Consensus 111 ~~~~d~~~l~~~i~~~-~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~ 185 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEEL-KEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIY 185 (377)
T ss_dssp TCSBCHHHHHHHHHHH-GGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEE
T ss_pred cCCcCHHHHHHHHhcC-CCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEE
Confidence 899999988 44 5 89887 6889999999999999999 9999999999876543333333 3688888
Q ss_pred CC--ccccCCCCCcEEEEEEe-ChHHHHHHHHHhhh------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 009523 345 SA--TKFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 409 (532)
Q Consensus 345 S~--sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~------------~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~ 409 (532)
|+ +|++++ + .||+++. ++++.++++..+.. ++..++++.+++.+..++++..+++++.++++
T Consensus 186 S~~~~K~l~~-g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~ 262 (377)
T 3ju7_A 186 SFHATKPFGI-G--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISE 262 (377)
T ss_dssp ECBTTSSSCC-B--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ECCCCCcCCC-C--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 85 699997 4 3777776 46777777765431 23457888888888999999999999999999
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
++.+.|++++.+.....|.-..+. ...++.+.+++. ...+.+++.|+..+|.++.+....+..+|...
T Consensus 263 ~~~~~L~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~ 330 (377)
T 3ju7_A 263 WYKQLLQSNGLMKKGWQLQKTEAV-----------IQQFMPILCPEE-VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFR 330 (377)
T ss_dssp HHHHHHHHTTTTTTTCBCCCCSCB-----------CCSSEEEECCTT-SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGT
T ss_pred HHHHHhcCCCCccccccCCCCCcc-----------eEEEEEEEeCCh-hhHHHHHHHHHHCCCceecccCCccccchhhh
Confidence 999999988754211112111111 112345555532 22567777777778887766422222333322
Q ss_pred cc--cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 490 SY--WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 490 s~--~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+| ..++..+. +.++.|||+++...+++.++.+.++|.+
T Consensus 331 ~~~~~~~p~~~~----~~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 331 NYKSTDLTRTNK----IAKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp TSCBSCCHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred cCCCCCCHHHHH----HHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 22 12222222 2356899999987777777777777654
No 75
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.94 E-value=2.6e-24 Score=227.73 Aligned_cols=273 Identities=12% Similarity=0.104 Sum_probs=185.8
Q ss_pred cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----CCHHHHHHhhcC--------
Q 009523 218 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNN-------- 285 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----~dle~Le~al~~-------- 285 (532)
+.+++++|++|+.+++.+++++||+|+++.|+|++... .++..|.++..++. .|+++|+++++.
T Consensus 110 ~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~ 185 (425)
T 2r2n_A 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ----SLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKN 185 (425)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH----HHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSS
T ss_pred cEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH----HHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhcccccc
Confidence 34555566799999999999999999999999988553 34566888887764 378999998862
Q ss_pred ---CCeeEEEE-eCCCCCCCcccCHH---HHHHHHHhCCCEEEEECCCCCCCc-------cccc-ccCCcEEEECCcccc
Q 009523 286 ---NNVSLFFT-ESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN-------QKAL-SLGADLVLHSATKFI 350 (532)
Q Consensus 286 ---~~tklV~l-esP~NptG~v~dl~---~I~~la~~~gi~lIvDet~a~~~~-------~~~l-~~gaDivv~S~sK~l 350 (532)
.++++|++ ++|+||||.+++.+ +|+++|+++|+++|+|++|+.... ...+ ..+.++++.|+||++
T Consensus 186 ~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~ 265 (425)
T 2r2n_A 186 PQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKII 265 (425)
T ss_dssp TTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTT
T ss_pred ccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhc
Confidence 25889877 68999999999865 899999999999999999763211 1111 124579999999999
Q ss_pred CCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---------HHHHHHHHHHHHHHHHHHHHh-CCC
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------LHLRVQQQNSTALRMAKILEA-HPK 420 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---------l~~r~~~~~~~a~~la~~L~~-~p~ 420 (532)
+ +| ...|++++++++++.+.........+.++..++++...++. +....++..++++.+.+.|++ .|+
T Consensus 266 ~-~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 343 (425)
T 2r2n_A 266 S-SG-LRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTG 343 (425)
T ss_dssp C-ST-TCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred c-Cc-cceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 7 44 56799999999999888766655555677666655555543 222233445667777888877 455
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 500 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~ 500 (532)
+..+..|. .|.++++++++.......+.+.+...++.+..|..+.. +.
T Consensus 344 ~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~---~~------------- 391 (425)
T 2r2n_A 344 LAEWHVPA----------------AGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYV---DS------------- 391 (425)
T ss_dssp SEEECCCS----------------BSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSS---ST-------------
T ss_pred CeEEeCCC----------------ceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcC---CC-------------
Confidence 54343332 46789999975211111123344445777777654321 00
Q ss_pred hcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009523 501 KYGIMDNLVRFSFGVED---FEDLKADVLQALH 530 (532)
Q Consensus 501 ~~gi~~~~IRlSvG~ed---~~dli~dL~~AL~ 530 (532)
+..+++||||++..+ .++.++.|.++++
T Consensus 392 --~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 392 --SAPSPYLRASFSSASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp --TSCCCEEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred --CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 012579999998433 4455556666554
No 76
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.94 E-value=9.9e-25 Score=227.10 Aligned_cols=283 Identities=12% Similarity=0.137 Sum_probs=197.8
Q ss_pred hHHHHHHHHHhhh----CC----Cc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALE----GA----ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
...++++++++++ |. ++ ++++++|++|+..++.+++++||+|++++++|++.... ++..|.++..++
T Consensus 64 g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 139 (389)
T 1gd9_A 64 GLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPA----VILAGGKPVEVP 139 (389)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHH----HHHHTCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHCCCEEEEec
Confidence 4567888888877 62 46 88888889999999999999999999999999986543 344577777765
Q ss_pred C-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----cccc-
Q 009523 273 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS- 336 (532)
Q Consensus 273 ~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-----~~l~- 336 (532)
. .|+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.+... ....
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 218 (389)
T 1gd9_A 140 TYEEDEFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASL 218 (389)
T ss_dssp CCGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred cCCccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhc
Confidence 3 278999999987 7999999999999999985 889999999999999999998754321 1112
Q ss_pred ---cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHH
Q 009523 337 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNST 407 (532)
Q Consensus 337 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~ 407 (532)
.+.|+++.|+||.++.+| ...|++++++++++.++........+.++...+.+...++. +....++..++
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (389)
T 1gd9_A 219 DGMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRR 297 (389)
T ss_dssp TTCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Confidence 357899999999998555 45799999999998888765544445566655555444432 33344555677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccC
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~p 486 (532)
++.+.+.|+++ ++. +..| ..|.++++.++........+.+.|. ..++.+..|..+. +
T Consensus 298 ~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~ 355 (389)
T 1gd9_A 298 RKLVWKRLNEM-GLP-TVKP----------------KGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFG----K 355 (389)
T ss_dssp HHHHHHHHHHT-TCC-CCCC----------------CBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGC----G
T ss_pred HHHHHHHHHHc-CCe-ecCC----------------CeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC----C
Confidence 78888888876 332 1111 1244677777520012345555554 5577766654321 0
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 530 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~---~dli~dL~~AL~ 530 (532)
..++.+|||++. +. ++.++.|.++++
T Consensus 356 -----------------~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~ 384 (389)
T 1gd9_A 356 -----------------AGEGYVRISYAT-AYEKLEEAMDRMERVLK 384 (389)
T ss_dssp -----------------GGTTBEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 025789999996 33 334455555554
No 77
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.94 E-value=3.9e-25 Score=232.66 Aligned_cols=289 Identities=14% Similarity=0.166 Sum_probs=200.3
Q ss_pred HHHHHHHHHhhhC------C---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALEG------A---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~g------a---~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...++++++++++ . ++++++++|++|+..++.+++++||+|+++.|+|++... .+...|.++..++.
T Consensus 69 ~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 144 (422)
T 3fvs_A 69 YPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP----MTMMAGGRPVFVSL 144 (422)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH----HHHHcCCEEEEEec
Confidence 4566777776654 2 357777777899999999999999999999999998654 34456777776643
Q ss_pred -----------------CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc---CHHHHHHHHHhCCCEEEEECCCCCCCc--
Q 009523 274 -----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN-- 331 (532)
Q Consensus 274 -----------------~dle~Le~al~~~~tklV~lesP~NptG~v~---dl~~I~~la~~~gi~lIvDet~a~~~~-- 331 (532)
.|+++|++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|+....
T Consensus 145 ~~~~~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 223 (422)
T 3fvs_A 145 KPGPIQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG 223 (422)
T ss_dssp BCCCCCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT
T ss_pred ccccccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC
Confidence 378999999987 799999999999999999 488999999999999999999875321
Q ss_pred ---ccccc----cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH--------
Q 009523 332 ---QKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------- 396 (532)
Q Consensus 332 ---~~~l~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t-------- 396 (532)
..... .+.++++.|+||.+|.+| ...|++++++++++.+...........++..++.+...++.
T Consensus 224 ~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 302 (422)
T 3fvs_A 224 HQHISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP 302 (422)
T ss_dssp CCCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT
T ss_pred CCCCChhhcccccCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch
Confidence 11111 245699999999998554 45799999999998887766544555566666665555543
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH------------HH
Q 009523 397 ---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA------------TI 461 (532)
Q Consensus 397 ---l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~------------~~ 461 (532)
+....++..++++.+.+.|+++ ++. +..|. .|.++++.++..... ..
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (422)
T 3fvs_A 303 SSYFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQ----------------GSYFLITDISDFKRKMPDLPGAVDEPYDR 364 (422)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----------------BSSEEEEECHHHHHHCCCCCCCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCC----------------eeeEEEEechhhcccccccccccccccHH
Confidence 3445566667888888999876 443 33332 466788877531000 22
Q ss_pred HHHHH-cCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhh
Q 009523 462 KFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHA 531 (532)
Q Consensus 462 ~~l~~-L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~~ 531 (532)
.+... ++..++.++.|+.+... + .....+++||||++. ++.++.++.|.+++++
T Consensus 365 ~~~~~ll~~~gv~v~~g~~f~~~--~--------------~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 365 RFVKWMIKNKGLVAIPVSIFYSV--P--------------HQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHCEECEEGGGGSCH--H--------------HHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCEEEeCcHHhcCC--c--------------CCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 34443 33347777777553210 0 001236899999997 2334556666666654
No 78
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.94 E-value=1.1e-24 Score=223.24 Aligned_cols=282 Identities=11% Similarity=0.043 Sum_probs=200.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 201 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
+..+++++++++++|.. ++++++||++|+.+++.++.++ +.+++..+.|. . .+...++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~-~--~~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFS-K--RFYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHH-H--HHHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHH-H--HHHHHHHHhCCCeEEEecCCCC
Confidence 55778899999999862 4677788889999999999988 55555555554 2 1223456678888887643
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC-CCEEEEECCCCCCCcccccccCCcEEEECCccccC
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~-gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lg 351 (532)
|+++|+ +++ +|++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+........ +|+++.|+||+++
T Consensus 119 ~~d~~~l~--~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~ 194 (362)
T 3ffr_A 119 GFYPADIT--VPA-DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFG 194 (362)
T ss_dssp CCCGGGCC--CCT-TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTC
T ss_pred CCCHHHHh--ccC-CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccC
Confidence 788888 555 799999999999999999999999999999 999999999875432111222 8999999999999
Q ss_pred CCCCcEEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHH-----HHHHHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQN 405 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~~~~~a~l~l~~l~t-----l~~r~~~~~ 405 (532)
++.+ +|+++.+++++++++.... ....+.+....+.+...++. +..+.++..
T Consensus 195 ~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 195 LPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp CCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4432 5788888888887765432 00233344433333333332 355667777
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccccc
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~ 485 (532)
++++++.+.|+++|++.. ..|. +. ...+.+++|.+++ ....+.+.|...++.++.|...
T Consensus 273 ~~~~~l~~~L~~~~g~~~-~~~~----~~--------~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~----- 331 (362)
T 3ffr_A 273 EKAALINTYIESSKVFSF-GVED----AK--------LRSMTTIVANTTM---LPGEINKILEPFDMAVGAGYGS----- 331 (362)
T ss_dssp HHHHHHHHHHHHCSSEEE-SSSC----GG--------GBCSSEEEEEESS---CHHHHHHHHGGGTEEEEECSGG-----
T ss_pred HHHHHHHHHHHHccCcee-ccCC----hh--------hcCCceEEEecCC---CHHHHHHHHHHCCeEEecCccc-----
Confidence 889999999999877643 2211 11 1135689999975 4566777777668877765210
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..++.||||++..+.++.++.+.++|++
T Consensus 332 ------------------~~~~~iRis~~~~~~~e~i~~l~~~l~~ 359 (362)
T 3ffr_A 332 ------------------KKETQIRIANFPAHSLEQVHKLVQTLKE 359 (362)
T ss_dssp ------------------GTTTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ------------------cCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 1257999999988777778888887764
No 79
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.94 E-value=1.4e-24 Score=230.06 Aligned_cols=284 Identities=13% Similarity=0.112 Sum_probs=198.6
Q ss_pred chhHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 200 NPTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~g-------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
.+...+++++++++++ .++++++++|++|+.+++..++++||+|+++.|+|.+... .+...|+++..++
T Consensus 95 ~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 170 (427)
T 3dyd_A 95 SIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT----LAESMGIEVKLYN 170 (427)
T ss_dssp TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHTTCEEEEEE
T ss_pred CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEEe
Confidence 4567899999999988 3568888888999999999999999999999999987543 4455688877765
Q ss_pred C-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----cccccc
Q 009523 273 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL 337 (532)
Q Consensus 273 ~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~ 337 (532)
. .|+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ......
T Consensus 171 ~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~ 249 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLIDE-KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATL 249 (427)
T ss_dssp EEGGGTTEECHHHHHSSCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGG
T ss_pred cccccCCCCCHHHHHHHhcc-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHh
Confidence 3 289999999987 6999999999999999999 99999999999999999999875321 111222
Q ss_pred CC---cEEEECCccccCCCCCcEEEEEEeC-------hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHH
Q 009523 338 GA---DLVLHSATKFIGGHNDVLAGSISGS-------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQ 402 (532)
Q Consensus 338 ga---Divv~S~sK~lgg~gd~~gG~lv~~-------~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~~ 402 (532)
+. .+++.|+||.++.+|. ..|+++++ +++++.+....... ...++..+..+...++ .+..+.+
T Consensus 250 ~~~~~vi~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~a~~~~L~~~~~~~~~~~~~ 327 (427)
T 3dyd_A 250 STDVPILSCGGLAKRWLVPGW-RLGWILIHDRRDIFGNEIRDGLVKLSQRI-LGPCTIVQGALKSILCRTPGEFYHNTLS 327 (427)
T ss_dssp CSSCCEEEEEESTTTSSCGGG-CCEEEEEECSTTSSHHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCCCcEEEEeeccccCCCcCc-ceEEEEecCcchhhHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 33 3778999999887764 45777765 35666666544322 3345555555444444 3455666
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHc-CCCceeecCC
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFG 477 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~l~~L-~~~~i~vs~G 477 (532)
+..++++.+.+.|+++|++. +..|. .|.++++.++.. ......+++.| +..++.+..|
T Consensus 328 ~~~~~~~~l~~~L~~~~g~~-~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g 390 (427)
T 3dyd_A 328 FLKSNADLCYGALAAIPGLR-PVRPS----------------GAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPA 390 (427)
T ss_dssp HHHHHHHHHHHHHHHSTTEE-EECCS----------------BTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHhcCCCce-ecCCC----------------eeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECC
Confidence 67788889999999887764 33332 356778887611 01223444444 2346666665
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 530 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~ 530 (532)
+.+. .++++|||++.. +.++.++.|.++++
T Consensus 391 ~~~~-----------------------~~~~iRis~~~~~e~i~~~l~~l~~~l~ 422 (427)
T 3dyd_A 391 TCFE-----------------------YPNFIRVVITVPEVMMLEACSRIQEFCE 422 (427)
T ss_dssp GGGT-----------------------CTTEEEEESCSCHHHHHHHHHHHHHHHH
T ss_pred cccC-----------------------CCCeEEEEECCCHHHHHHHHHHHHHHHH
Confidence 4321 157999999852 23444555555554
No 80
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.94 E-value=1.4e-25 Score=232.13 Aligned_cols=281 Identities=13% Similarity=0.113 Sum_probs=194.8
Q ss_pred HHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-
Q 009523 204 VVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 274 (532)
Q Consensus 204 ~~Le~~lA~l~g--------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~- 274 (532)
.+++++++++++ .++++++++|++|+..++.+++++||+|+++.++|++... .+...|.++..++.+
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~ 136 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFH----LLSATQREGIFIDATG 136 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHH----HHHHHTCCEEEEECTT
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHH----HHHHcCCEEEEccCCC
Confidence 456666666654 3578888889999999999999999999999999998654 344568888888765
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----ccc----ccCCc
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL----SLGAD 340 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-----~~l----~~gaD 340 (532)
|+++|++++++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|...... .++ ..+.+
T Consensus 137 ~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 215 (377)
T 3fdb_A 137 GINLHDVEKGFQA-GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVC 215 (377)
T ss_dssp SCCHHHHHHHHHT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHE
T ss_pred CCCHHHHHHHhcc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcE
Confidence 89999999987 6999999999999999986 567777799999999999997652211 111 12345
Q ss_pred EEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q 009523 341 LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L 415 (532)
+++.|+||.+|.+| ...|+++. ++++++.++..........++..++.+...++. +..+.++..++++.+.+.|
T Consensus 216 i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 294 (377)
T 3fdb_A 216 ITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEI 294 (377)
T ss_dssp EEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChHhccCcc-hhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999997665 34676554 788888887765544455666666655555543 4455566678888888888
Q ss_pred Hh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCceeecCCCcccccccCccccc
Q 009523 416 EA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 491 (532)
Q Consensus 416 ~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~---~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~ 491 (532)
++ .|++. +..|. .+.++++.++.. .+....++++ .++.+..|..+...
T Consensus 295 ~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~~---~gi~v~~g~~~~~~-------- 346 (377)
T 3fdb_A 295 PKRIPGAK-ITPMQ----------------ATYLMWIDFRDTTIEGSPSEFFIEK---AKVAMNDGAWFGED-------- 346 (377)
T ss_dssp HHHSTTCE-ECCCS----------------BCSEEEEECTTSCCCSCHHHHHHHH---HCEECEEGGGGCGG--------
T ss_pred HhhCCCce-EecCC----------------eeEEEEEECcccCCCHHHHHHHHHh---CCEEecCChhccCC--------
Confidence 87 66653 22221 244667888642 1223333332 25666666443210
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009523 492 WDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 531 (532)
Q Consensus 492 ~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~~ 531 (532)
.++.+|||++.. +.++.++.|.+++++
T Consensus 347 -------------~~~~~Ris~~~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 347 -------------GTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp -------------GTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred -------------CCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 257999999962 233445555565543
No 81
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.94 E-value=7.4e-25 Score=229.46 Aligned_cols=293 Identities=16% Similarity=0.181 Sum_probs=200.4
Q ss_pred CCCCch-hHHHHHHHHHhhhC--------C-CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 196 GRYGNP-TTVVVEEKMSALEG--------A-ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 196 ~R~~~p-~~~~Le~~lA~l~g--------a-~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
.+|+.+ ...+++++++++++ . ++++++++|++|+..++.+++++||+|+++.+.|++.... +...|
T Consensus 55 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g 130 (410)
T 3e2y_A 55 NQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPM----VRMAG 130 (410)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTT
T ss_pred cCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHH----HHHcC
Confidence 344443 35678888888765 2 4677777778999999999999999999999999986543 34457
Q ss_pred cEEEEeCC----------------CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc---CHHHHHHHHHhCCCEEEEECCC
Q 009523 266 ITATVIDP----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 266 v~v~~vd~----------------~dle~Le~al~~~~tklV~lesP~NptG~v~---dl~~I~~la~~~gi~lIvDet~ 326 (532)
.++..++. .|+++|++++++ ++++|++++|+||||.++ ++++|+++|+++|+++|+|++|
T Consensus 131 ~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~ 209 (410)
T 3e2y_A 131 AVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVY 209 (410)
T ss_dssp CEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred CEEEEEeccccccccccccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhh
Confidence 77776653 289999999987 799999999999999996 5889999999999999999998
Q ss_pred CCCCc-----ccccc----cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-
Q 009523 327 ATPLN-----QKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT- 396 (532)
Q Consensus 327 a~~~~-----~~~l~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t- 396 (532)
..... ..... .+.++++.|+||.+|.+| ...|++++++++++.++..........++..++.+...++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 288 (410)
T 3e2y_A 210 EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWID 288 (410)
T ss_dssp TTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Confidence 64321 11111 244599999999998555 46789999999999888766554555666666665555542
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---H------
Q 009523 397 ----------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---L------ 457 (532)
Q Consensus 397 ----------l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~---~------ 457 (532)
+....++..++++.+.+.|+++ ++. +..|. .|.++++.+... .
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 350 (410)
T 3e2y_A 289 IKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK-PIVPD----------------GGYFIIADVSSLGADLSDMNSD 350 (410)
T ss_dssp HTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----------------BSSEEEEECGGGCCCCTTCCSS
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----------------ccEEEEEEchhhhccccccccc
Confidence 4445556667888888889876 443 33332 456778877531 0
Q ss_pred -HHHHHHHHH-cCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 458 -TATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 458 -~~~~~~l~~-L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.....+... ++..++.+..|+.+... + ... ..+++||||++. +.+ .++...++|+
T Consensus 351 ~~~~~~~~~~ll~~~gv~v~~g~~f~~~--~--------~~~------~~~~~iRis~~~-~~e-~l~~~l~~l~ 407 (410)
T 3e2y_A 351 EPYDYKFVKWMTKHKKLTAIPVSAFCDS--K--------SKP------HFEKLVRFCFIK-KDS-TLDAAEEIFR 407 (410)
T ss_dssp CCHHHHHHHHHHHHHSEECEEGGGGSCT--T--------THH------HHTTEEEEECCC-CHH-HHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHcCEEEeCchhhCCC--C--------CCC------CCCCEEEEEEcC-CHH-HHHHHHHHHH
Confidence 011233332 23346777777553210 0 000 025899999998 433 3444444444
No 82
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.94 E-value=1.7e-24 Score=225.58 Aligned_cols=275 Identities=16% Similarity=0.121 Sum_probs=193.0
Q ss_pred HHHHHHHHHhhh----C-----CC-cEEEeCCHHHHHHHHHHHhccCC-----CEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 203 TVVVEEKMSALE----G-----AE-STVIMASGMSASTVMLLALVPAG-----GHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 203 ~~~Le~~lA~l~----g-----a~-~~i~~sSG~~Ai~~al~all~~G-----d~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
..++++++++++ | .+ +++++++|++|+.+++.+++++| |+|+++.|+|++... .+...|.+
T Consensus 68 ~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~----~~~~~g~~ 143 (396)
T 3jtx_A 68 LPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG----ATLLGGGE 143 (396)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH----HHHHTTCE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH----HHHHcCCE
Confidence 355666666554 5 34 67888888899999999999997 799999999987553 34556888
Q ss_pred EEEeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHH---HHHHHHhCCCEEEEECCCCCCCcc-----c
Q 009523 268 ATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPLNQ-----K 333 (532)
Q Consensus 268 v~~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~---I~~la~~~gi~lIvDet~a~~~~~-----~ 333 (532)
+..++.+ |+++|++++++ ++++|++++|+||||.+++.++ |+++|+++|+++|+|++|...... .
T Consensus 144 ~~~v~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 222 (396)
T 3jtx_A 144 IHFANCPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLG 222 (396)
T ss_dssp EEEEECCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCC
T ss_pred EEEeecCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCch
Confidence 8877642 78899998887 7999999999999999998655 888999999999999998753221 1
Q ss_pred cc--------ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHH
Q 009523 334 AL--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQ 402 (532)
Q Consensus 334 ~l--------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~ 402 (532)
.. ..+.++++.|+||.++.+| ...|++++++++++.++......+...++..++.+...++ .+....+
T Consensus 223 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 301 (396)
T 3jtx_A 223 CLQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRR 301 (396)
T ss_dssp HHHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHH
Confidence 11 2567899999999887665 4578999999999998877666666677776666655553 3444555
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCES 481 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~~i~vs~G~~~s 481 (532)
+..++.+.+.+.|+++.. +..| ..|.++++.++. .....+.+.| +..++.++.|..+.
T Consensus 302 ~~~~~~~~l~~~l~~~~~---~~~~----------------~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~ 360 (396)
T 3jtx_A 302 LYQEKFERVIPILQQVFD---VKLP----------------DASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLA 360 (396)
T ss_dssp HHHHHHHHHHHHHTTTSC---CCCC----------------SSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHhcCC---ccCC----------------CeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhC
Confidence 566677777777776421 1111 136688999874 1233444444 33477777776543
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009523 482 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 520 (532)
Q Consensus 482 l~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~d 520 (532)
.-.. ..+...+.||||++. +.++
T Consensus 361 ~~~~---------------~~~~~~~~iRis~~~-~~~~ 383 (396)
T 3jtx_A 361 RDTE---------------QGNPGEGYVRIALVA-DVAT 383 (396)
T ss_dssp CCCT---------------TCCTTTTEEEEECCS-CHHH
T ss_pred Cccc---------------ccCCCCCeEEEEEcC-CHHH
Confidence 2100 001236899999997 4443
No 83
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.94 E-value=1.2e-24 Score=221.55 Aligned_cols=276 Identities=16% Similarity=0.148 Sum_probs=194.4
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
+.+|+++...+|++++|+++|.+ +.++++++++++.+++..+ +||+|+++.|+|.+.. ..++..|+++..++
T Consensus 45 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~ 118 (337)
T 3p1t_A 45 INRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYR----ARIAVSGLRHFEIG 118 (337)
T ss_dssp TTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHH----HHHTTSCCEEEEEC
T ss_pred hccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHH----HHHHHcCCEEEEec
Confidence 45667889999999999999974 4555555558999988887 9999999999999854 34566799988887
Q ss_pred CC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc---cccccCCcEEEE
Q 009523 273 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALSLGADLVLH 344 (532)
Q Consensus 273 ~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~---~~l~~gaDivv~ 344 (532)
.+ |+++|+++ . ++++|++++|+||||.++|++++.++|+++++ +|+|++|...... .....+.++++.
T Consensus 119 ~~~~~~~d~~~l~~~--~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~ 194 (337)
T 3p1t_A 119 LTDDLLLDPNDLAQV--S-RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFR 194 (337)
T ss_dssp BCTTSSBCHHHHTTC--C-TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEE
T ss_pred CCCCCCCCHHHHHhh--c-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEe
Confidence 43 78888876 2 58999999999999999999999999999997 5669998743211 112235689999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKV 421 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~p~v 421 (532)
|+||.+|.+| ...|++++++++++.++...... ..++.....+...+ +.+..++++..++++++.+.|+++ ++
T Consensus 195 S~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 270 (337)
T 3p1t_A 195 SFSKSYGLAG-LRLGALFGPSELIAAMKRKQWFC--NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GY 270 (337)
T ss_dssp ESSSTTCCTT-TCCEEEECCHHHHHHHHTTSCTT--CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred eCchhccCcc-hheEEEEeCHHHHHHHHhhcCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cC
Confidence 9999998555 35789999999998887654332 33444443333333 345566667777888888888876 33
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHh
Q 009523 422 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 501 (532)
Q Consensus 422 ~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~ 501 (532)
. + +| ..|+++++.++.. +. +.+.|...++.++.|..+.
T Consensus 271 ~-~-~~----------------~~~~~~~~~~~~~-~~---~~~~l~~~gi~v~~g~~~~-------------------- 308 (337)
T 3p1t_A 271 R-V-AS----------------SEANFVLVENAAG-ER---TLRFLRERGIQVKDAGQFG-------------------- 308 (337)
T ss_dssp C-B-CC----------------CSSSEEEEECTTT-HH---HHHHHHHTTEECEEGGGGT--------------------
T ss_pred E-E-CC----------------CCCeEEEEEcCCH-HH---HHHHHHHCCeEEEECccCC--------------------
Confidence 2 1 11 1356888887643 22 3334444577777664421
Q ss_pred cCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009523 502 YGIMDNLVRFSFGV-EDFEDLKADVLQAL 529 (532)
Q Consensus 502 ~gi~~~~IRlSvG~-ed~~dli~dL~~AL 529 (532)
. ++.+|||++. ++.+.+++.|++.+
T Consensus 309 --~-~~~iRis~~~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 309 --L-HHHIRISIGREEDNDRLLAALAEYS 334 (337)
T ss_dssp --C-CSEEEEECCCHHHHHHHHHHHHHHT
T ss_pred --C-CCeEEEecCCHHHHHHHHHHHHHHh
Confidence 1 4799999995 34455555555443
No 84
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.94 E-value=9.5e-25 Score=227.03 Aligned_cols=288 Identities=10% Similarity=0.024 Sum_probs=196.9
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
+...++++++++++|.+ .++++++|++|+.+++.+++++||+|++++++|++.. +...++..|.++..++.
T Consensus 42 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 119 (392)
T 2z9v_A 42 LLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEA 119 (392)
T ss_dssp HHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCC
Confidence 45788999999999974 5677788889999999999999999999999998763 22344556878777764
Q ss_pred CCHHHHHHhhcC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCccccC
Q 009523 274 ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 274 ~dle~Le~al~~-~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~sK~lg 351 (532)
.|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|+||+++
T Consensus 120 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~ 199 (392)
T 2z9v_A 120 IDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLG 199 (392)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTC
T ss_pred CCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCccccc
Confidence 379999999942 2689999999999999999999999999999999999999875422 23334578999999999766
Q ss_pred CCCCcEEEEEEeChHHHHHHHHHh--------------------hhcCCCccHHHHHHHHHhHHH-----HHHHHHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNS 406 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~~~~--------------------~~~G~~~~~~~a~l~l~~l~t-----l~~r~~~~~~ 406 (532)
++.+ .|++++++++++.++... ....++.+......+...++. +....++..+
T Consensus 200 ~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 277 (392)
T 2z9v_A 200 APPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHAL 277 (392)
T ss_dssp CCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 5432 389999998888776421 011223344433333333332 3344556667
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCccccccc
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQ 485 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~~~sl~~~ 485 (532)
+++++.+.|++. ++. +..|. +. ...+++++|.++.+ .....+.+.|... ++.+..|...
T Consensus 278 ~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~----- 337 (392)
T 2z9v_A 278 TAKAMRAGVTAM-GLS-VWAAS----DS--------IASPTTTAVRTPDG-VDEKALRQAARARYGVVFSSGRGE----- 337 (392)
T ss_dssp HHHHHHHHHHHT-TCC-BSSSS----GG--------GBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECEECCGG-----
T ss_pred HHHHHHHHHHHc-CCe-eccCC----cc--------ccCCceEEEECCCC-CCHHHHHHHHHhcCCEEEecCCCC-----
Confidence 788888888775 432 21111 00 11467889998632 1234555555443 6666655320
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEE-ec-C---CCHHHHHHHHHHHHh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFS-FG-V---EDFEDLKADVLQALH 530 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlS-vG-~---ed~~dli~dL~~AL~ 530 (532)
..++.+||| ++ . ++.+.+++.|.++++
T Consensus 338 ------------------~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 338 ------------------TLGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp ------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCCeEEEeCcccccCHHHHHHHHHHHHHHHH
Confidence 025789999 46 2 344555666666654
No 85
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.93 E-value=4.4e-24 Score=222.17 Aligned_cols=284 Identities=14% Similarity=0.103 Sum_probs=196.7
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..++++++++++ |. + +++++++|++|+..++.+++++||+|+++.+.|++... .++..|.++..++.
T Consensus 69 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~~ 144 (386)
T 1u08_A 69 VQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP----AIALSGGIVKRMAL 144 (386)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEeec
Confidence 567777777774 52 4 68888888899999999999999999999999998654 34556888777754
Q ss_pred ------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-------cccc--
Q 009523 274 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL-- 335 (532)
Q Consensus 274 ------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-------~~~l-- 335 (532)
.|+++|++++++ ++++|++++|+||||.+.| +++|+++|+++|+++|+|++|..... ...+
T Consensus 145 ~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 223 (386)
T 1u08_A 145 QPPHFRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQ 223 (386)
T ss_dssp CTTTCCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHH
T ss_pred CcccCcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccC
Confidence 479999999976 7999999999999999986 68899999999999999999865221 1112
Q ss_pred ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q 009523 336 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 411 (532)
Q Consensus 336 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~l 411 (532)
..+.|+++.|+||+++++| ...|++++++++++.++..........++..+..+...++. +....++..++++.+
T Consensus 224 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (386)
T 1u08_A 224 LRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDIL 302 (386)
T ss_dssp HHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHH
T ss_pred ccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 3478999999999998655 45789999999998887765444444455555555555543 333344555667777
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcC-CCceeecCCCcccccccCccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALK-IPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~ 489 (532)
.+.|+++ ++. +..|. .|.++++.+++.. .....+.+.|. ..++.+..|..+.. .+
T Consensus 303 ~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~--- 359 (386)
T 1u08_A 303 VNALNES-RLE-ILPCE----------------GTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCA--DP--- 359 (386)
T ss_dssp HHHTTSS-SCE-ECCCC----------------BSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCS--SC---
T ss_pred HHHHHHC-CCe-ecCCC----------------ceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCC--CC---
Confidence 7777765 332 22221 3568899987420 12344555442 34676666543210 00
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..++.+|||++. + ++.++.+.+.|.+
T Consensus 360 --------------~~~~~iRis~~~-~-~~~i~~~~~~l~~ 385 (386)
T 1u08_A 360 --------------FPHKLIRLCFAK-K-ESTLLAAAERLRQ 385 (386)
T ss_dssp --------------CCSCEEEEECCS-C-HHHHHHHHHHHTT
T ss_pred --------------CCCCEEEEEEcC-C-HHHHHHHHHHHhh
Confidence 135789999995 3 4445555555543
No 86
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.93 E-value=1.9e-24 Score=231.00 Aligned_cols=286 Identities=15% Similarity=0.113 Sum_probs=199.9
Q ss_pred hHHHHHHHHHhhh----CC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 202 TTVVVEEKMSALE----GA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga---~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
...+|+++|++++ |. ++++++++|++|+..++.+++++||+|+++.|+|.+.... +...|.++..++.
T Consensus 119 g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~ 194 (448)
T 3aow_A 119 GFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQA----FNFYEPQYIQIPLD 194 (448)
T ss_dssp CCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTCCEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEeccC
Confidence 4678888888888 75 4567777778999999999999999999999999986543 4456787777754
Q ss_pred ---CCHHHHHHhhc----C-CCeeEEE-EeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----ccccc
Q 009523 274 ---ADMEGLEAALN----N-NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS 336 (532)
Q Consensus 274 ---~dle~Le~al~----~-~~tklV~-lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~ 336 (532)
.|+++|+++++ + .++++|+ +++|+||||.+++ +++|.++|+++|+++|+|++|..... .....
T Consensus 195 ~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~ 274 (448)
T 3aow_A 195 DEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKA 274 (448)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGG
T ss_pred CCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHh
Confidence 37999999987 4 2699985 6899999999998 46899999999999999999875321 11112
Q ss_pred ---cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHH
Q 009523 337 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNST 407 (532)
Q Consensus 337 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~ 407 (532)
.+.++++.|+||.++ +| ...|++++++++++.+...........++..++++...++. +....++..++
T Consensus 275 ~~~~~~vi~~~S~SK~~~-~G-lriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 352 (448)
T 3aow_A 275 LDNEGRVIYLGTFSKILA-PG-FRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPR 352 (448)
T ss_dssp GCTTSCEEEEEESTTTTC-GG-GCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEccchhhcc-cc-ccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 256799999999998 44 56899999999999887655443333456655555444442 33333444467
Q ss_pred HHHHHHHHHh-CC-CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccccc
Q 009523 408 ALRMAKILEA-HP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 408 a~~la~~L~~-~p-~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~ 485 (532)
++.+.+.|++ .| ++. +..|. .|.++|++++.+ .....+.+.|...++.+..|..+..
T Consensus 353 ~~~l~~~L~~~~~~g~~-~~~p~----------------~g~~~~v~~~~~-~~~~~l~~~l~~~gV~v~pg~~f~~--- 411 (448)
T 3aow_A 353 RDAMLEALEEFMPEGVK-WTKPE----------------GGMFIWVTLPDG-IDSKKMLERAIKKGVAYVPGEAFYA--- 411 (448)
T ss_dssp HHHHHHHHHHHCCTTCE-ECCCS----------------BSSEEEEECSTT-CCHHHHHHHHHHTTEECEEGGGGST---
T ss_pred HHHHHHHHHHhCCCCeE-EeCCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCcEEEcchhhcC---
Confidence 7788888876 35 343 32232 467889999742 1234555555444777776654321
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHHHHHHh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVE---DFEDLKADVLQALH 530 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e---d~~dli~dL~~AL~ 530 (532)
. +..++++|||++.. +.++.++.|.++++
T Consensus 412 -~---------------~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 412 -H---------------RDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp -T---------------CCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred -C---------------CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 0 11357999999863 45566666666664
No 87
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.93 E-value=4.7e-25 Score=230.54 Aligned_cols=287 Identities=11% Similarity=0.063 Sum_probs=198.7
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 201 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
+..+++++++++++|.+ + .++++||++|+..++.+++++||+|+++.++|++.. +...++..|++++.++.+
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 123 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGE 123 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCC
Confidence 45688999999999974 2 456678899999999999999999999999998742 234556678888888754
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCccccC
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK~lg 351 (532)
|+++|+++++++++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. ..+....++|+++.|+||+++
T Consensus 124 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 124 VFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTC
T ss_pred CCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccC
Confidence 89999999975369999999999999999999999999999999999999976542 234445689999999999865
Q ss_pred CCCCcEEEEEEeChHHHHHHHHHh------------------------------------hhcCCCccHHHHHHHHHhHH
Q 009523 352 GHNDVLAGSISGSGKLVTQIRNLH------------------------------------HVLGGALNPNAAYLIIRGMK 395 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~~~~------------------------------------~~~G~~~~~~~a~l~l~~l~ 395 (532)
++. ..|+++.++++++.++... ....++.+......+...++
T Consensus 204 ~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 281 (411)
T 3nnk_A 204 GPS--GTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECAR 281 (411)
T ss_dssp CCS--SEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred CCC--ceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHH
Confidence 543 2689999999988876532 00112334443333333333
Q ss_pred H-----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-
Q 009523 396 T-----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI- 469 (532)
Q Consensus 396 t-----l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~- 469 (532)
. +....++..++++++.+.|++. ++. +..| +. ...+.+++|.++.+ .....+.+.|..
T Consensus 282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-----~~--------~~~~~~~~~~~~~~-~~~~~l~~~l~~~ 345 (411)
T 3nnk_A 282 LILQEGLDYGIARHKLHGDALVKGIQAM-GLE-TFGD-----LK--------HKMNNVLGVVIPQG-INGDQARKLMLED 345 (411)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BCSC-----GG--------GBCSSEEEEECCTT-CCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE-eCCC-----cc--------cccccEEEEECCCC-CCHHHHHHHHHHh
Confidence 2 3445556667788888888875 322 1111 00 12467899998632 123344444432
Q ss_pred CceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCCC----HHHHHHHHHHHHh
Q 009523 470 PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVED----FEDLKADVLQALH 530 (532)
Q Consensus 470 ~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv-G~ed----~~dli~dL~~AL~ 530 (532)
.++.+..|.. ...++.|||++ +..+ .+++++.|+++++
T Consensus 346 ~gi~v~~g~~-----------------------~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~ 388 (411)
T 3nnk_A 346 FGIEIGTSFG-----------------------PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLN 388 (411)
T ss_dssp HSEEEEECCG-----------------------GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred cCeEEeCccC-----------------------CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHH
Confidence 2666655411 01357999998 7543 4555566666554
No 88
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.93 E-value=5.1e-25 Score=229.88 Aligned_cols=205 Identities=21% Similarity=0.198 Sum_probs=167.3
Q ss_pred HHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHH
Q 009523 203 TVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 279 (532)
Q Consensus 203 ~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~L 279 (532)
.+.+++.+++++|. +++++++||++|+..++.++ +||+|+++.+.|+++...+. .++..|+++..+ .|+++|
T Consensus 60 ~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l 134 (374)
T 2aeu_A 60 AEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEI 134 (374)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHH
T ss_pred HHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHH
Confidence 35667777788898 67899999999999999987 99999999999988766554 556779998888 689999
Q ss_pred HHhhcCCCeeE-EEEeCCCCCCC-cccCHHHHHHHHHhCCCEEEEECCCCCCC--c-cc--ccccCCcEEEECCccccCC
Q 009523 280 EAALNNNNVSL-FFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGTFATPL--N-QK--ALSLGADLVLHSATKFIGG 352 (532)
Q Consensus 280 e~al~~~~tkl-V~lesP~NptG-~v~dl~~I~~la~~~gi~lIvDet~a~~~--~-~~--~l~~gaDivv~S~sK~lgg 352 (532)
+++ ++ ++++ |++++|+|||| ...++++|.++|+++|+++|+|++++..+ . .. +...++|+++.|+||+++|
T Consensus 135 ~~~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g 212 (374)
T 2aeu_A 135 LNK-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG 212 (374)
T ss_dssp HTT-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS
T ss_pred Hhc-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccC
Confidence 988 65 7999 99999999999 88899999999999999999999976543 1 11 4556889999999999987
Q ss_pred CCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH-HHHHHHHHHHHH----HHHHHh
Q 009523 353 HNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL-RVQQQNSTALRM----AKILEA 417 (532)
Q Consensus 353 ~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~-r~~~~~~~a~~l----a~~L~~ 417 (532)
. .+|++++++++++.++.....++...++..++++..+++.+.. +++++.++++.+ .+.|.+
T Consensus 213 ~---~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (374)
T 2aeu_A 213 P---RGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNK 279 (374)
T ss_dssp C---SCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred c---ceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4799999999999988877667777788888887888876544 566777777666 455544
No 89
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.93 E-value=7.9e-25 Score=228.53 Aligned_cols=279 Identities=14% Similarity=0.125 Sum_probs=191.4
Q ss_pred hHHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~----g----a~~~i~~sSG~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
...+|++++++++ | .++++++++|++|+..++.+++++| |+|+++.|.|++... .++..|.++..++
T Consensus 77 g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~----~~~~~g~~~~~v~ 152 (398)
T 3ele_A 77 GDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKV----FVNAAGARLVEVP 152 (398)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHH----HHHHTTCEEEEEC
T ss_pred CcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHH----HHHHcCCEEEEEe
Confidence 3456666666654 3 2567788888899999999999999 999999999998653 3455688888887
Q ss_pred CC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHh------CCCEEEEECCCCCCCc------
Q 009523 273 PA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLN------ 331 (532)
Q Consensus 273 ~~------dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~------~gi~lIvDet~a~~~~------ 331 (532)
.+ |+++|++++++ ++++|++++|+||||.+.+ +++|+++|++ +|+++|+|++|+....
T Consensus 153 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~ 231 (398)
T 3ele_A 153 ADTEHFQIDFDALEERINA-HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVP 231 (398)
T ss_dssp CCTTTSSCCHHHHHHTCCT-TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCC
T ss_pred cCCcCCcCCHHHHHHHhCc-CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcC
Confidence 54 89999999987 7999999999999999998 6677788998 9999999999875321
Q ss_pred ccccccCCcEEEECCccccCCCCCcEEEEEEeChHH------HHHHHHHhhhcC-CCccHHHHHHHHHhHHHHHHHHHHH
Q 009523 332 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL------VTQIRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQ 404 (532)
Q Consensus 332 ~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l------i~~l~~~~~~~G-~~~~~~~a~l~l~~l~tl~~r~~~~ 404 (532)
......+.++++.|+||.+|.+| ...|++++++++ .+.+.......+ ...++..++.+...++... ..++.
T Consensus 232 ~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~ 309 (398)
T 3ele_A 232 FVTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAY 309 (398)
T ss_dssp CGGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHH
T ss_pred ChHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHH
Confidence 11122356799999999998555 457888888763 333333333322 2344455554444443221 23455
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccc
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD 484 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~ 484 (532)
.++++.+.+.|++. ++. +..|. .|.++++.+++. ....+.+.|...++.+..|..+.
T Consensus 310 ~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~--- 366 (398)
T 3ele_A 310 KENRDLLYEGLTRI-GYH-CFKPD----------------GAFYMFVKALED--DSNAFCEKAKEEDVLIVAADGFG--- 366 (398)
T ss_dssp HHHHHHHHHHHHHH-TCC-EECCS----------------BSSEEEEECSSS--CHHHHHHHHHTTTEECEESGGGT---
T ss_pred HHHHHHHHHHHHHc-CCe-ecCCC----------------eeEEEEEEcCCC--CHHHHHHHHHHCCEEEeCccccC---
Confidence 67777888888765 332 22221 244588988753 34566666766788887765431
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 485 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 485 ~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
.++.+|||++. |+.++.++.|.++++
T Consensus 367 --------------------~~~~iRis~~~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 367 --------------------CPGWVRISYCVDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp --------------------CTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 14689999985 233445566666654
No 90
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.93 E-value=1.5e-24 Score=224.77 Aligned_cols=278 Identities=15% Similarity=0.125 Sum_probs=195.9
Q ss_pred CCCchhHHHHHHHHHhh------hCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 197 RYGNPTTVVVEEKMSAL------EGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l------~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
+|+++...+++++++++ .+. ++.+++++|++++..++.+++++||+|+++.++|++... .+...|.++
T Consensus 65 ~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~----~~~~~g~~~ 140 (369)
T 3cq5_A 65 RYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPI----LAKGTHTEF 140 (369)
T ss_dssp SCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHH----HHHHTTCEE
T ss_pred cCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHH----HHHHcCCEE
Confidence 44444446899999998 443 345556666699999999999999999999999987653 345568887
Q ss_pred EEeCC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-cccc----ccC
Q 009523 269 TVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL----SLG 338 (532)
Q Consensus 269 ~~vd~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l----~~g 338 (532)
..++. .|+++|++++++.++++|++++|+||||.+.|++++.++++.+++++|+|++|+.+.. .... ..+
T Consensus 141 ~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 220 (369)
T 3cq5_A 141 IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYP 220 (369)
T ss_dssp EEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCT
T ss_pred EEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCC
Confidence 77753 3789999998753589999999999999999999999999999999999999865432 1112 235
Q ss_pred -CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHH
Q 009523 339 -ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 339 -aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~ 414 (532)
.++++.|+||+++.+| ...|++++++++++.++.....++ .++..++.+...++ .+..+.++..++++++.+.
T Consensus 221 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 297 (369)
T 3cq5_A 221 TKLVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVMLVRLPYH--LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAAR 297 (369)
T ss_dssp TTEEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHTTSCTTC--SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCEEEEEechHhcCCcc-cceEEEEeCHHHHHHHHHcCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999998555 457899999998888876544333 56666655555554 3444555666778888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 494 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~ 494 (532)
|++. ++..+ |. .|+++++.++.+ ...+.+.|...++.+..|+
T Consensus 298 L~~~-g~~~~--~~----------------~~~~~~~~~~~~---~~~l~~~l~~~gi~v~~~~---------------- 339 (369)
T 3cq5_A 298 LEEL-GYAVV--PS----------------ESNFVFFGDFSD---QHAAWQAFLDRGVLIRDVG---------------- 339 (369)
T ss_dssp HHHH-TCEEE--CC----------------SSSEEEEECCSS---HHHHHHHHHHTTEECBCCS----------------
T ss_pred HHhC-CCEEC--CC----------------CCeEEEEECCCC---HHHHHHHHHHCCEEEEECC----------------
Confidence 8763 44322 21 356888888622 3445555554566665541
Q ss_pred CHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009523 495 SQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQAL 529 (532)
Q Consensus 495 ~~~~~~~~gi~~~~IRlSvG~e-d~~dli~dL~~AL 529 (532)
.++.+|||++.+ +.+.+++.|.+++
T Consensus 340 ----------~~~~iRis~~~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 340 ----------IAGHLRTTIGVPEENDAFLDAAAEII 365 (369)
T ss_dssp ----------CTTEEEEECCCHHHHHHHHHHHHHHH
T ss_pred ----------CCCeEEEEeCCHHHHHHHHHHHHHHH
Confidence 146899999932 2344555555544
No 91
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.93 E-value=5.4e-25 Score=226.41 Aligned_cols=285 Identities=15% Similarity=0.101 Sum_probs=199.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~--VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.++...+|++++++++|.+..++++||++|+..++++++.+||+ |+++.+.|....... ......|.++..++..
T Consensus 46 ~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 124 (359)
T 3pj0_A 46 NGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQD-GLKELQQITPLLLGTANQ 124 (359)
T ss_dssp BSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHHCCEEEECSCTTS
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcc-hHHHhcCceEEecCCcCC
Confidence 46889999999999999988899999999999999999999987 555555443221100 0112348888887753
Q ss_pred --CHHHHHHhhcCCCeeEEEEeCCCCCC-CcccCHHHH---HHHHHhCCCEEEEECCCCCCC------cccccccCCcEE
Q 009523 275 --DMEGLEAALNNNNVSLFFTESPTNPF-LRCVDVKLV---SDLCHKKGAIVCIDGTFATPL------NQKALSLGADLV 342 (532)
Q Consensus 275 --dle~Le~al~~~~tklV~lesP~Npt-G~v~dl~~I---~~la~~~gi~lIvDet~a~~~------~~~~l~~gaDiv 342 (532)
|+++|+++ .+ ++++|++++|+||+ |.+.|.+++ .++|++||+++|+|+++.... ....+..+.|++
T Consensus 125 ~~d~~~l~~~-~~-~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~ 202 (359)
T 3pj0_A 125 LLTIDDIKSL-RE-PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSV 202 (359)
T ss_dssp CCCHHHHHTC-SS-CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEE
T ss_pred CcCHHHHHhc-cC-CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEE
Confidence 79999988 55 79999999999998 798886655 999999999999999865321 122233578999
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCc--cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+.|+||+++++. +|++++++++++.++......+... ....+..+...++....++++..++++++.+.|+++|+
T Consensus 203 ~~s~sK~~~~~~---gg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g 279 (359)
T 3pj0_A 203 YVSFYKGIGGIA---GAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSG 279 (359)
T ss_dssp EEESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTT
T ss_pred EEeccccCCCcc---eEEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCC
Confidence 999999998774 5889999999999887655444322 22222223345555556677777889999999999877
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHH
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
+.....|. .++++++.++... .....+.+.|...++.+..|..+.. +
T Consensus 280 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~---~------------- 327 (359)
T 3pj0_A 280 VKTVPEVP----------------VSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKS---A------------- 327 (359)
T ss_dssp EEEESSSC----------------SSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEE---T-------------
T ss_pred ceeeccCC----------------cceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccC---C-------------
Confidence 64332332 3567888886432 3355666667666777777643210 1
Q ss_pred HhcCCCCCeEEEEecCC----CHHHHHHHHH
Q 009523 500 LKYGIMDNLVRFSFGVE----DFEDLKADVL 526 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~e----d~~dli~dL~ 526 (532)
..+++|++++.. +.+++.+.++
T Consensus 328 -----~~~~~r~~i~~~~~~~~~e~l~~~l~ 353 (359)
T 3pj0_A 328 -----DVCAFEVSVGDAFAEIPAKNLELVFR 353 (359)
T ss_dssp -----TEEEEEEECCTTGGGSCHHHHHHHHH
T ss_pred -----CceEEEEEecCccccCCHHHHHHHHH
Confidence 246899999854 3444444443
No 92
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.93 E-value=7.3e-25 Score=229.14 Aligned_cols=287 Identities=15% Similarity=0.125 Sum_probs=199.4
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----C
Q 009523 201 PTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----~ 274 (532)
+...+|++++++++|. ++++++++|++|+..++.+++++||+|+++.++|++.... ++..|.++..++. .
T Consensus 74 ~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~ 149 (397)
T 2zyj_A 74 EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQA----FRLQGPRFLTVPAGEEGP 149 (397)
T ss_dssp TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTCCEEEEEEEETTEE
T ss_pred CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEEecCcCCCCC
Confidence 3568899999999986 3566666667999999999999999999999999986543 4456777777654 3
Q ss_pred CHHHHHHhhcCCCeeEEE-EeCCCCCCCcccCHH---HHHHHHHhCCCEEEEECCCCCCCc-----cccccc------CC
Q 009523 275 DMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN-----QKALSL------GA 339 (532)
Q Consensus 275 dle~Le~al~~~~tklV~-lesP~NptG~v~dl~---~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~------ga 339 (532)
|+++|++++++.++++|+ +++|+||||.+.|.+ +|+++|+++|+++|+|++|..... .....+ +.
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPG 229 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCC
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCe
Confidence 799999998753588885 689999999999855 899999999999999999876421 111222 34
Q ss_pred cEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~~ 414 (532)
++++.|+||+++ +| ...|++++++++++.++..........++..++.+...++ .+....++..++++.+.+.
T Consensus 230 ~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 230 VIYLGSFSKVLS-PG-LRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp EEEEEESTTTTC-GG-GCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccc-cc-ceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999 43 4679999999998888765543322335665555554443 2333444555777788888
Q ss_pred HHh-CC-CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccccc
Q 009523 415 LEA-HP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 492 (532)
Q Consensus 415 L~~-~p-~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~ 492 (532)
|++ .| ++. +..|. .|.+++++++.+ .....+.+.|...++.+..|..+.. .
T Consensus 308 L~~~~~~g~~-~~~~~----------------~g~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~f~~----~----- 360 (397)
T 2zyj_A 308 LDREVPKEVR-YTRPK----------------GGMFVWMELPKG-LSAEGLFRRALEENVAFVPGGPFFA----N----- 360 (397)
T ss_dssp HHHHSCTTSE-ECCCS----------------BSSEEEEECSTT-CCHHHHHHHHHHTTEEEEESGGGCT----T-----
T ss_pred HHHHCCCCeE-EccCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCCEEechHHhcC----C-----
Confidence 876 35 343 22232 467889998742 1234555555545777776644220 0
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHHHHHHh
Q 009523 493 DLSQSERLKYGIMDNLVRFSFGVE---DFEDLKADVLQALH 530 (532)
Q Consensus 493 ~~~~~~~~~~gi~~~~IRlSvG~e---d~~dli~dL~~AL~ 530 (532)
+..++.+|||++.. +.++.++.|.++++
T Consensus 361 ----------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 391 (397)
T 2zyj_A 361 ----------GGGENTLRLSYATLDREGIAEGVRRLGRALK 391 (397)
T ss_dssp ----------SCCTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 11357999999975 34455666666654
No 93
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=1.2e-24 Score=225.43 Aligned_cols=277 Identities=13% Similarity=0.062 Sum_probs=191.4
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccC-------------CCEEEEcCCCCcchHHHHHHhcccC
Q 009523 200 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPA-------------GGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~-------------Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
....+++++.+++++|.+ +.+++++|++|+..++.++..+ ||+|+++.+.|+++... ++..
T Consensus 68 ~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~ 143 (397)
T 3f9t_A 68 KLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKG----REMM 143 (397)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHH----HHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHH----HHHc
Confidence 445667899999999874 4588889999999999998776 99999999999986543 3445
Q ss_pred CcEEEEeCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC---------
Q 009523 265 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--------- 330 (532)
Q Consensus 265 Gv~v~~vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~--------- 330 (532)
|++++.++.+ |+++|++++++.++++|++++|+||||.+.|+++|.++|++||+++|+|++|+.+.
T Consensus 144 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 144 DLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp TCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred CceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence 8888888765 89999999976358999999999999999999999999999999999999986421
Q ss_pred ------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhc---------CCC--ccHHHHHHHHHh
Q 009523 331 ------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL---------GGA--LNPNAAYLIIRG 393 (532)
Q Consensus 331 ------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~---------G~~--~~~~~a~l~l~~ 393 (532)
...... ++|+++.|+||+++++.. +|++++.++.+.+.++...... +.. .+...++.++..
T Consensus 224 ~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 301 (397)
T 3f9t_A 224 KKGVNYKFDFSL-GVDSITIDPHKMGHCPIP-SGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRY 301 (397)
T ss_dssp CTTCCCCCSGGG-TCSEEECCTTTTTCCCSS-CEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHH
T ss_pred cccccccccccc-cCCeEEEccccccCCCCC-ceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHH
Confidence 112223 889999999999966542 3444444555554443211111 111 133444444433
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCc
Q 009523 394 M--KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 471 (532)
Q Consensus 394 l--~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~ 471 (532)
+ ..+..++++..++++++.+.|+++ ++..+ .| ..+++++|.++. ...+.+.|...+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~~----~~~~~~~l~~~g 359 (397)
T 3f9t_A 302 LGREGQRKIVNECMENTLYLYKKLKEN-NFKPV-IE----------------PILNIVAIEDED----YKEVCKKLRDRG 359 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SC----------------CSSSEEEEECTT----HHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cC----------------CCccEEEEEeCC----HHHHHHHHHhCC
Confidence 3 344556677778889999999886 43222 12 135688888764 234444444445
Q ss_pred eeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 472 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 472 i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+.+..|. .++.|||+++...+++.++.+.++|+
T Consensus 360 i~v~~~~--------------------------~~~~~Ri~~~~~~~~e~i~~~~~~l~ 392 (397)
T 3f9t_A 360 IYVSVCN--------------------------CVKALRIVVMPHIKREHIDNFIEILN 392 (397)
T ss_dssp CBCEECS--------------------------SSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred eEEeccC--------------------------CCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 5554432 14789999997555555555555544
No 94
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=6.9e-25 Score=228.38 Aligned_cols=259 Identities=14% Similarity=0.117 Sum_probs=185.9
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 200 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
.+..+++++.+++++|.+ ++++++||++|+..++.+++++||+|++++++|++. .+...++..|.++..++.
T Consensus 66 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~ 143 (393)
T 1vjo_A 66 LALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGN--RLVDMAGRYGADVRTISKPWG 143 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHH--HHHHHHHHcCCceEEEecCCC
Confidence 467788999999999974 466777888999999999999999999999999872 122345567888888763
Q ss_pred --CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCcccc
Q 009523 274 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 350 (532)
Q Consensus 274 --~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK~l 350 (532)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. .......++|+++.|+||++
T Consensus 144 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l 223 (393)
T 1vjo_A 144 EVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGL 223 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccc
Confidence 589999999875248999999999999999999999999999999999999987332 12223457899999999999
Q ss_pred CCCCCcEEEEEEeChHHHHHHHHH----h----------------hhcCCCccHHHHHHHHHhHHHH-----HHHHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRNL----H----------------HVLGGALNPNAAYLIIRGMKTL-----HLRVQQQN 405 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~~----~----------------~~~G~~~~~~~a~l~l~~l~tl-----~~r~~~~~ 405 (532)
++++ ..|++++++++++.++.. . ...+++.++...+.+...++.+ ....++..
T Consensus 224 ~~~~--~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 301 (393)
T 1vjo_A 224 GCSP--GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQ 301 (393)
T ss_dssp CSCS--SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cCCC--ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 8776 358999999888877431 0 1111145565555555555443 34455666
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCC
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGG 478 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~ 478 (532)
++++++.+.|++. ++. +..|. .+ ..+++++|.++.+ .....+.+.|... ++.+..|.
T Consensus 302 ~~~~~l~~~L~~~-g~~-~~~~~-----~~--------~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~ 359 (393)
T 1vjo_A 302 KNVEYLWERLEDI-GLS-LHVEK-----EY--------RLPTLTTVCIPDG-VDGKAVARRLLNEHNIEVGGGL 359 (393)
T ss_dssp HHHHHHHHHHHHT-TCC-BSSCG-----GG--------BCSSEEEEECCTT-CCHHHHHHHHHHHHCEECEECC
T ss_pred HHHHHHHHHHHHc-CCc-ccCCc-----cc--------cCCcEEEEEcCCC-CCHHHHHHHHHhhCCEEEecCc
Confidence 7888888888875 432 21110 10 1457889988632 2234566666544 67776664
No 95
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=4.2e-24 Score=223.44 Aligned_cols=282 Identities=16% Similarity=0.083 Sum_probs=199.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 276 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dl 276 (532)
..+...+++++||+++|.++.+++++|++++..++..+. .+||+|+++.+.|+++... ++..|+++..++.+|+
T Consensus 89 ~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~d~ 164 (401)
T 2bwn_A 89 TTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEG----IKRNAGPKRIFRHNDV 164 (401)
T ss_dssp CBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHH----HHHSCCCEEEECTTCH
T ss_pred ChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHH----HHHcCCeEEEEcCCCH
Confidence 346789999999999999889999999998777776654 5899999999999886643 3456889999998899
Q ss_pred HHHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc------c-cccc--cCCcEEEE
Q 009523 277 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------Q-KALS--LGADLVLH 344 (532)
Q Consensus 277 e~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~------~-~~l~--~gaDivv~ 344 (532)
++|+++++. .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. . .... ...|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~ 244 (401)
T 2bwn_A 165 AHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNG 244 (401)
T ss_dssp HHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEE
T ss_pred HHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEe
Confidence 999998861 2689999999999999999999999999999999999999874321 0 0111 13589999
Q ss_pred CCccccCCCCCcEEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHHHHh
Q 009523 345 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 345 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~~~~~a~l~l~~l~tl-----~~r~~~~~~~a~~la~~L~~ 417 (532)
|++|.++++ ||++++++++++.++.... .+....++..++.+...++.+ ....++..++++++.+.|++
T Consensus 245 s~sK~~~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (401)
T 2bwn_A 245 TLAKAYGVF----GGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA 320 (401)
T ss_dssp ESSSTTCSC----CEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhccCC----CCEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999965 4899999888887765322 222223445444444455433 34455666778888888876
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCccccccCCCH
Q 009523 418 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQ 496 (532)
Q Consensus 418 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~ 496 (532)
. ++. +..| .+++++|.++. ......+.+.|. ..++.+..+...
T Consensus 321 ~-g~~-~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~---------------- 364 (401)
T 2bwn_A 321 L-GMP-IIDH-----------------GSHIVPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFP---------------- 364 (401)
T ss_dssp H-TCC-BCCC-----------------SSSCEEEECCC-HHHHHHHHHHHHHHHCEECCEECTT----------------
T ss_pred C-CCc-ccCC-----------------CCCeEEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCC----------------
Confidence 5 332 1111 14588998864 234556666662 446666543211
Q ss_pred HHHHhcCC--CCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 497 SERLKYGI--MDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 497 ~~~~~~gi--~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+. ..+.+|||++...+++.++.+.++|+
T Consensus 365 ------~~~~~~~~iRis~~~~~t~~~i~~~~~~l~ 394 (401)
T 2bwn_A 365 ------TVPRGTERLRFTPSPVHDLKQIDGLVHAMD 394 (401)
T ss_dssp ------TSCTTCCEEEECCCTTSCHHHHHHHHHHHH
T ss_pred ------CCCCCCceEEEEeeCCCCHHHHHHHHHHHH
Confidence 11 13689999997655555555555554
No 96
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=1.8e-24 Score=221.17 Aligned_cols=280 Identities=11% Similarity=0.034 Sum_probs=193.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---- 274 (532)
+...++++++++++|.+ +++++++|++|+..++.+++++||+|+++.+.|++.. +...++..|.++..++.+
T Consensus 34 ~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 111 (352)
T 1iug_A 34 EVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDT 111 (352)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCC
Confidence 45788999999999985 5677778889999999999999999999999998865 223455678888887642
Q ss_pred -CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCC-cccccccCCcEEEECCcccc
Q 009523 275 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 350 (532)
Q Consensus 275 -dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK~l 350 (532)
|+++|++ + ++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+. .......++|+++.|+||++
T Consensus 112 ~d~~~l~~---~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 187 (352)
T 1iug_A 112 PRPEDVAK---E-GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGL 187 (352)
T ss_dssp CCTTTSCC---S-SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTT
T ss_pred CCHHHHhc---c-CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccc
Confidence 5666655 3 689999999999999999999999999999 99999999986432 12223457899999999966
Q ss_pred CCCCCcEEEEEEeChHHHHH---------HHH----H-hhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQ---------IRN----L-HHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMA 412 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~---------l~~----~-~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~~la 412 (532)
+++.+ .|+++.+++++++ ++. . .....++.+......+...++. +....++..++++++.
T Consensus 188 ~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 265 (352)
T 1iug_A 188 MCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLY 265 (352)
T ss_dssp CCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred cCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65432 5888888887654 221 1 1122234455444433334433 3345566667888888
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccccc
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 492 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~ 492 (532)
+.|++. ++. +..|. ..+++++|.++.+ .....+.+.|...++.+..|.. +
T Consensus 266 ~~L~~~-g~~-~~~~~---------------~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~------~------ 315 (352)
T 1iug_A 266 GVGEEG-GLR-PVPKR---------------FSPAVAAFYLPEG-VPYARVKEAFAQRGAVIAGGQG------P------ 315 (352)
T ss_dssp HHHHHT-TCE-ESCSS---------------BCTTCEEEECCTT-CCHHHHHHHHHTTTEECEECCG------G------
T ss_pred HHHHHC-CCc-ccccc---------------cCCeEEEEEcCCC-CCHHHHHHHHHHCCEEEEeCCC------c------
Confidence 888876 543 32221 1366899998732 2245566666666777766531 1
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 493 DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 493 ~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
..++.|||+++....++.++.+.++|
T Consensus 316 -----------~~~~~iRi~~~~~~~~~~i~~~~~~l 341 (352)
T 1iug_A 316 -----------LKGKVFRLSLMGAYDRYEALGVAGMF 341 (352)
T ss_dssp -----------GTTTEEEECCCSSCCHHHHHHHHHHH
T ss_pred -----------cCCCEEEEEccccCCHHHHHHHHHHH
Confidence 02578999999654333334443333
No 97
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.93 E-value=7.4e-24 Score=223.78 Aligned_cols=288 Identities=15% Similarity=0.141 Sum_probs=197.5
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..++++++++++ |. + +++++++|++|+.+++.+++++||+|+++.+.|++.... ++..|.++..++.
T Consensus 79 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 154 (429)
T 1yiz_A 79 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPM----VKAAGGIPRFIPL 154 (429)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEeC
Confidence 567777777775 52 4 677777778999999999999999999999999986543 3456777776642
Q ss_pred ---------------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 274 ---------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 274 ---------------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
.|+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 233 (429)
T 1yiz_A 155 KPNKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE 233 (429)
T ss_dssp BCCCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSC
T ss_pred CcccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC
Confidence 478999999986 7999999999999999996 88999999999999999999874321
Q ss_pred ---cccc--ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----------
Q 009523 332 ---QKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------- 396 (532)
Q Consensus 332 ---~~~l--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---------- 396 (532)
...+ ..+.|+++.|+||.++++| ...|++++++++++.++..........++..+..+...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 312 (429)
T 1yiz_A 234 HIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPEC 312 (429)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred CcChhhccCCcCceEEEecchhccCCCC-cceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHH
Confidence 1112 3467999999999998665 45799999999998887765444444556555555555544
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-----------HHHHHHH
Q 009523 397 -LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-----------TATIKFI 464 (532)
Q Consensus 397 -l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-----------~~~~~~l 464 (532)
+....++..++++.+.+.|+++ ++. +..|. .|.++++++++.. .....+.
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (429)
T 1yiz_A 313 YFNSISGELMAKRDYMASFLAEV-GMN-PTVPQ----------------GGYFMVADWSSLDSKVDLTQETDARKDYRFT 374 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCE-EEECS----------------BSSEEEEECCSSCTTTTCCSSSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEEEEEcccccccccccccccCCCHHHHH
Confidence 2333344556777777888765 343 22221 3568899987420 2345566
Q ss_pred HHcC-CCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 465 DALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 465 ~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
+.|. ..++.+..|..+... + ..+..++.||||++. ++.++.++.|.++++
T Consensus 375 ~~l~~~~gv~v~~g~~f~~~--~--------------~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 375 KWMTKSVGLQGIPPSAFYSE--P--------------NKHLGEDFVRYCFFKKDENLQKAAEILRKWKG 427 (429)
T ss_dssp HHHHHHTSEECBCGGGGSCG--G--------------GGGGTTTEEEEECCSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCEEEeCchHhCCC--c--------------ccCCCCCeEEEEecCCHHHHHHHHHHHHHhcc
Confidence 6553 457777766443210 0 001125799999996 123334444444443
No 98
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.93 E-value=5.6e-25 Score=227.70 Aligned_cols=277 Identities=13% Similarity=0.054 Sum_probs=190.0
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccC--CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 203 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~--Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
..++++++++++ |. ++.+++++|++|+..++.+++++ ||+|+++.++|++... .+...|.++..++
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 136 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG----AAKFIKAKSLLMP 136 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH----HHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH----HHHHcCCEEEEcc
Confidence 456777777665 63 56888888899999999999999 9999999999997553 3456788888887
Q ss_pred CCCHH----HHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----cccc------
Q 009523 273 PADME----GLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL------ 335 (532)
Q Consensus 273 ~~dle----~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l------ 335 (532)
.++.+ ++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ....
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (376)
T 3ezs_A 137 LTKENDFTPSLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLA 215 (376)
T ss_dssp CCGGGTSCCCCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHT
T ss_pred cCCCCCcchhHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccc
Confidence 54322 56666766 6899999999999999998 56777779999999999999875321 1111
Q ss_pred ---ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHH
Q 009523 336 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTAL 409 (532)
Q Consensus 336 ---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~ 409 (532)
..+.++++.|+||.+|.+| ...|++++++++++.++......+...++..++.+...++. +....++..++.+
T Consensus 216 ~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 294 (376)
T 3ezs_A 216 GNEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLK 294 (376)
T ss_dssp TCTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred cccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3577899999999997554 45789999999999988776655666677766665555543 3333344445555
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccccccCcc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~G~~~sl~~~pa~ 488 (532)
.+.+.|+ ++. .| ..|.++++.++ + ...+.+.|.. .++.+..|..+...
T Consensus 295 ~l~~~l~---~~~---~~----------------~~~~~~~~~~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~----- 343 (376)
T 3ezs_A 295 LARKIFK---NTL---IY----------------PYSFYVYLPVQ-N---GENFAKTLYQNEGIITLPALYLGRN----- 343 (376)
T ss_dssp HHHHHST---TCC---CC----------------SBSSEEEEECS-C---HHHHHHHHHHHHCCBCEEGGGGCST-----
T ss_pred HHHHHhc---CCC---CC----------------CcceEEEEECC-C---HHHHHHHHHHhCCEEEeCcHHhCCC-----
Confidence 5555554 111 11 24678899887 2 2334444433 46666666443210
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
+..++.||||++. ++.++.++.|.++++
T Consensus 344 --------------~~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 344 --------------RIGADYVRLALVYDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp --------------TTTTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred --------------CCCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 1236899999976 233444555555554
No 99
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.93 E-value=2.1e-24 Score=226.41 Aligned_cols=212 Identities=18% Similarity=0.266 Sum_probs=170.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----- 273 (532)
.+...++++++++++|.++.+++++|++|+..++.++ +++||+|+++.++|+++.. .+...|+++..++.
T Consensus 62 ~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~ 137 (399)
T 2oga_A 62 GPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWL----AVSATGATPVPVEPHEDHP 137 (399)
T ss_dssp SHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCSSSS
T ss_pred chhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHH----HHHHCCCEEEEEecCCCCC
Confidence 4788999999999999988999999999999999999 8999999999999998654 34456888888763
Q ss_pred -CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--CcEEEECC--cc
Q 009523 274 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 348 (532)
Q Consensus 274 -~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aDivv~S~--sK 348 (532)
.|+++|++++++ ++++|+ |+||||.+.|+++|.++|+++|+++|+|++++.+...+....+ .|+++.|+ +|
T Consensus 138 ~~d~~~l~~~i~~-~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK 213 (399)
T 2oga_A 138 TLDPLLVEKAITP-RTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGK 213 (399)
T ss_dssp SBCHHHHHHHCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTS
T ss_pred CcCHHHHHHhcCC-CCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCc
Confidence 279999999987 699887 5789999999999999999999999999999765332322334 69999999 69
Q ss_pred ccCCCCCcEEEEEEeC-hHHHHHHHHHhhhc----------C--CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~----------G--~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L 415 (532)
+++++| .+|+++.+ +++++.++...... | ..+++..++++..+++.+....++..++++++.+.|
T Consensus 214 ~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L 291 (399)
T 2oga_A 214 NLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGL 291 (399)
T ss_dssp SSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999866 47888875 78888777644321 1 245677777777778777766777777888888888
Q ss_pred HhCCCc
Q 009523 416 EAHPKV 421 (532)
Q Consensus 416 ~~~p~v 421 (532)
++.|++
T Consensus 292 ~~~~g~ 297 (399)
T 2oga_A 292 AGLPGI 297 (399)
T ss_dssp TTCTTC
T ss_pred ccCCCc
Confidence 876654
No 100
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.93 E-value=3.5e-24 Score=226.58 Aligned_cols=284 Identities=12% Similarity=0.063 Sum_probs=201.3
Q ss_pred CCCch-hHHHHHHHHHhhh-----CC--Cc---EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhccc-C
Q 009523 197 RYGNP-TTVVVEEKMSALE-----GA--ES---TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK-M 264 (532)
Q Consensus 197 R~~~p-~~~~Le~~lA~l~-----ga--~~---~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~-~ 264 (532)
+|+.+ ...+|++++|+++ +. ++ ++++++|++|+.+++.+++++||+|+++.|+|++... .+.. .
T Consensus 83 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~ 158 (430)
T 2x5f_A 83 PYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL----VFNTRN 158 (430)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH----HHTTTT
T ss_pred ccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH----HHHHhc
Confidence 44443 4678999999998 64 45 6777777899999999999999999999999998653 3455 7
Q ss_pred CcEEEEeCC------CCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC---HHHHHHHHHh-----CCCEEEEECCCCC
Q 009523 265 GITATVIDP------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDGTFAT 328 (532)
Q Consensus 265 Gv~v~~vd~------~dle~Le~al~~~--~tklV~lesP~NptG~v~d---l~~I~~la~~-----~gi~lIvDet~a~ 328 (532)
|.++..++. .|+++|++++++. ++++|++++|+||||.++| +++|.++|++ +|+++|+|++|..
T Consensus 159 g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~ 238 (430)
T 2x5f_A 159 GANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYG 238 (430)
T ss_dssp CCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTT
T ss_pred CCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhccc
Confidence 888887763 3689999988652 5899999999999999999 8899999999 9999999999875
Q ss_pred CCc----c-c---cc-c-cCC---cEEEECCccccCCCCCcEEEEEEe---ChHHHHHHHHHhhh----cCCCccHHHHH
Q 009523 329 PLN----Q-K---AL-S-LGA---DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHV----LGGALNPNAAY 388 (532)
Q Consensus 329 ~~~----~-~---~l-~-~ga---Divv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~~~----~G~~~~~~~a~ 388 (532)
... . . .+ . .+. ++++.|+||.++.+| ...|++++ ++++++.+...... .....++..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (430)
T 2x5f_A 239 LFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQS 317 (430)
T ss_dssp CBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred ccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCC-CCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHH
Confidence 321 1 1 11 1 345 788999999998665 35688888 88998888765543 34446677666
Q ss_pred HHHHhHH----HHHH---HHHHHHHHHHHHHHHHHhC---CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH
Q 009523 389 LIIRGMK----TLHL---RVQQQNSTALRMAKILEAH---PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT 458 (532)
Q Consensus 389 l~l~~l~----tl~~---r~~~~~~~a~~la~~L~~~---p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~ 458 (532)
.+...++ .... ..++..++++.+.+.|+++ .++. +..| ..|.++++.+++ .
T Consensus 318 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~-~~~~----------------~~g~~~~~~~~~--~ 378 (430)
T 2x5f_A 318 AVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQ-AYDF----------------NSGYFMAIKVHD--V 378 (430)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEE-ECCC----------------CBSSEEEEEESS--S
T ss_pred HHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCce-eeCC----------------CceEEEEeCCCC--C
Confidence 6666665 2222 4455556777788888732 1232 2111 134568999873 2
Q ss_pred HHHHHHHHcCC-CceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec---CCCHHHHHHHHHHHHhh
Q 009523 459 ATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG---VEDFEDLKADVLQALHA 531 (532)
Q Consensus 459 ~~~~~l~~L~~-~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG---~ed~~dli~dL~~AL~~ 531 (532)
....+.+.|.. .++.+..| .++.+|||++ .++.+++++.|.+++++
T Consensus 379 ~~~~~~~~l~~~~gi~v~~g---------------------------~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 379 DPEALRKHLIDKYSIGVIAL---------------------------NATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp CHHHHHHHHHHHHCEECEEC---------------------------SSSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEecC---------------------------CCCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 23455555543 46655543 1468999999 35577778888887764
No 101
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=2e-24 Score=224.62 Aligned_cols=293 Identities=14% Similarity=0.129 Sum_probs=199.3
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
|+.+..+..+++++++++++|.+ +.+++++|++|+..++.+++++||+|+++.+.|++.. +...++..|.+++.+
T Consensus 46 ~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 123 (393)
T 2huf_A 46 LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVV 123 (393)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEE
Confidence 33444567889999999999974 3456678889999999999999999999999998742 223445678888887
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEEC
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 345 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S 345 (532)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|+++..+.. ......++|+++.|
T Consensus 124 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 203 (393)
T 2huf_A 124 KSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTG 203 (393)
T ss_dssp ECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECC
T ss_pred eCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEEC
Confidence 63 4899999998752589999999999999999999999999999999999999764322 22234578999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHh----h-h---------cC---------CCccHHHHHHHHHhHHH-----H
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----H-V---------LG---------GALNPNAAYLIIRGMKT-----L 397 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----~-~---------~G---------~~~~~~~a~l~l~~l~t-----l 397 (532)
+||+++|+.+ .|++++++++++.++... . . ++ ++.+......+...++. +
T Consensus 204 ~sK~l~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 281 (393)
T 2huf_A 204 SQKVLGAPPG--ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGL 281 (393)
T ss_dssp SSSTTCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCcccccCCC--eEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 9998654332 288889998888876531 0 0 11 23333333322223332 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecC
Q 009523 398 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSF 476 (532)
Q Consensus 398 ~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~ 476 (532)
....++..++++++.+.|++. ++. +..|. . ...+++++|.++.+ .....+.+.|.. .++.+..
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~ 345 (393)
T 2huf_A 282 PALIARHEDCAKRLYRGLQDA-GFE-LYADP-----K--------DRLSTVTTIKVPQG-VDWLKAAQYAMKTYLVEISG 345 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCC-BSSCG-----G--------GBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBC
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCe-eccCc-----c--------ccCCcEEEEEcCCC-CCHHHHHHHHHHhCCEEEec
Confidence 345566667888888888876 432 21110 0 01345888988622 123445555532 3666665
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCC----CHHHHHHHHHHHHh
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVE----DFEDLKADVLQALH 530 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv-G~e----d~~dli~dL~~AL~ 530 (532)
|..+ ..++.|||++ +.. +.+.+++.|.++++
T Consensus 346 g~~~-----------------------~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 346 GLGP-----------------------TAGQVFRIGLMGQNATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp CCGG-----------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred Cccc-----------------------ccCCEEEEEcccCcCCHHHHHHHHHHHHHHHH
Confidence 5321 0257899999 632 34556666666654
No 102
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.93 E-value=2.3e-24 Score=225.70 Aligned_cols=287 Identities=17% Similarity=0.195 Sum_probs=200.4
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...++++++++++ |. ++++++++|++|+.+++.+++++||+|+++.++|++... .+...|.++..++.
T Consensus 76 ~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 76 GIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLL----AFEQLGAKIEGVPV 151 (407)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH----HHHTTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHHcCCEEEEccc
Confidence 4678899999888 72 456677777899999999999999999999999998653 34556888777754
Q ss_pred ----CCHHHHHHhhc----C-CCeeEEE-EeCCCCCCCcccCHH---HHHHHHHhCCCEEEEECCCCCCCc-----cccc
Q 009523 274 ----ADMEGLEAALN----N-NNVSLFF-TESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN-----QKAL 335 (532)
Q Consensus 274 ----~dle~Le~al~----~-~~tklV~-lesP~NptG~v~dl~---~I~~la~~~gi~lIvDet~a~~~~-----~~~l 335 (532)
.|+++|+++++ + .++++|+ +++|+||||.+.|++ +|+++|+++|+++|+|++|+.... ....
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 231 (407)
T 2zc0_A 152 DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLK 231 (407)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGG
T ss_pred CCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChh
Confidence 37999999987 4 2689874 789999999999976 899999999999999999875421 1111
Q ss_pred c---cCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-------HHHHHHHHH
Q 009523 336 S---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LHLRVQQQN 405 (532)
Q Consensus 336 ~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t-------l~~r~~~~~ 405 (532)
. .+.++++.|+||+++ +| ..+|++++++++++.++......+...++.....+...++. +....++..
T Consensus 232 ~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (407)
T 2zc0_A 232 ALDNEGRVIVAGTLSKVLG-TG-FRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYK 309 (407)
T ss_dssp GGCSSCCEEEEEESTTTTC-TT-SCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHH
T ss_pred hcCCCCCEEEEcccccccC-CC-cceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 2 245689999999999 44 45899999999998888765544444466655555444443 222334455
Q ss_pred HHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCccccc
Q 009523 406 STALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIV 483 (532)
Q Consensus 406 ~~a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~~~sl~ 483 (532)
++++.+.+.|++ .|++. +..|. .|.++++.++.+ .....+.+.|... ++.+..|..+..
T Consensus 310 ~~~~~l~~~L~~~~~~~~-~~~~~----------------~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~- 370 (407)
T 2zc0_A 310 EKRDIMLKALENHLPNAE-FTKPI----------------AGMFVMFFLPEG-ADGISFANELMEREGVVVVPGKPFYT- 370 (407)
T ss_dssp HHHHHHHHHHHHHCTTSC-BCCCS----------------BSSEEEEECSTT-CCHHHHHHHHHHHTCEECBCSGGGCS-
T ss_pred HHHHHHHHHHHHhCCCCE-EecCC----------------CcEEEEEEcCCC-CCHHHHHHHHHHhCCeEEECchhccC-
Confidence 677778888876 35432 21221 356889998642 1234555555444 777776643210
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHhh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALHA 531 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~---ed~~dli~dL~~AL~~ 531 (532)
. +..++.+|||++. ++.+.+++.|.+++++
T Consensus 371 ---~---------------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 371 ---D---------------ESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp ---S---------------SCCTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred ---C---------------CCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0125799999986 4566777777777654
No 103
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=9e-25 Score=226.51 Aligned_cols=290 Identities=14% Similarity=0.176 Sum_probs=202.1
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 200 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
.+...++++++++++|.+ .+++++||++|+..++++++++||+|+++.+.|.+.. +...+...|.++..++.
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~ 132 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPG 132 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCC
Confidence 456778999999999874 3566788889999999999999999999988876432 22445667888887763
Q ss_pred --CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCcccc
Q 009523 274 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFI 350 (532)
Q Consensus 274 --~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~sK~l 350 (532)
.|+++|+++++++++++|++++|+||||.+.|+++|.++|++||+++|+|++++.+ ........++|+++.|+||++
T Consensus 133 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~ 212 (393)
T 3kgw_A 133 EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVL 212 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccc
Confidence 48999999997645999999999999999999999999999999999999998743 233334567899999999987
Q ss_pred CCCCCcEEEEEEeChHHHHHHHHHhh--------------h---------cCCCccHHHHHHHHHhHHH-----HHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRNLHH--------------V---------LGGALNPNAAYLIIRGMKT-----LHLRVQ 402 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~~~~--------------~---------~G~~~~~~~a~l~l~~l~t-----l~~r~~ 402 (532)
+++.+ .|++++++++++.+..... . ..++.+....+.+...++. +....+
T Consensus 213 ~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 290 (393)
T 3kgw_A 213 NAPPG--ISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWR 290 (393)
T ss_dssp CCCSS--CEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCCc--eeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 65432 6889999998888764221 0 1123344444433333332 345566
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCES 481 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~~~s 481 (532)
+..++++++.+.|++. ++. +..|. +. ...+.+++|.++.+ .....+.+.|... ++.+..|...
T Consensus 291 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~- 354 (393)
T 3kgw_A 291 RHREATAHLHKHLQEM-GLK-FFVKD----PE--------IRLPTITTVTVPAG-YNWRDIVSYVLDHFSIEISGGLGP- 354 (393)
T ss_dssp HHHHHHHHHHHHHHHT-TCC-BSSSS----GG--------GBCSSEEEEECCTT-BCHHHHHHHHHHHHCEECBCCCGG-
T ss_pred HHHHHHHHHHHHHHHc-CCe-eccCC----hh--------hcCCeEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCCccc-
Confidence 6778888888889876 332 11111 00 12456788988632 2234455555433 6666665320
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEe-cC----CCHHHHHHHHHHHHhh
Q 009523 482 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 482 l~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv-G~----ed~~dli~dL~~AL~~ 531 (532)
..++.|||++ +. ++.+++++.|.+++++
T Consensus 355 ----------------------~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 355 ----------------------TEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp ----------------------GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 1257999998 64 4556677777777654
No 104
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.93 E-value=8.8e-25 Score=224.10 Aligned_cols=285 Identities=16% Similarity=0.126 Sum_probs=194.5
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHHHhcccCCcEEEEeCC--
Q 009523 201 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIETVLPKMGITATVIDP-- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~----~~i~~sSG~~Ai~~al~all~~Gd~VIv~~-~~y~~t~~~~~~~l~~~Gv~v~~vd~-- 273 (532)
+...++++++++++|.+ +++++++|++|+..++.+++++||+|++.. +.|+..+ ...+...|+++..++.
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~ 113 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGE 113 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCC
Confidence 67889999999999953 478888899999999999999999988776 4444322 2334556777777754
Q ss_pred ---CCHHHHHHhhcCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCcc
Q 009523 274 ---ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 348 (532)
Q Consensus 274 ---~dle~Le~al~~~-~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~sK 348 (532)
.|+++|+++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|+||
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K 193 (366)
T 1m32_A 114 VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANK 193 (366)
T ss_dssp TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSS
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcc
Confidence 4799999999753 489999999999999999999999999999999999999875422 22223578999999999
Q ss_pred ccCCCCCcEEEEEEeChHHHHHHHHHh---------------hh---cCCCccHHHHHHHHHhHHHH------HHHHHHH
Q 009523 349 FIGGHNDVLAGSISGSGKLVTQIRNLH---------------HV---LGGALNPNAAYLIIRGMKTL------HLRVQQQ 404 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~~~li~~l~~~~---------------~~---~G~~~~~~~a~l~l~~l~tl------~~r~~~~ 404 (532)
+++++.+ .|++++++++++.++... .. ...+.++...+.+...++.+ ....++.
T Consensus 194 ~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 271 (366)
T 1m32_A 194 CIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRY 271 (366)
T ss_dssp TTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccCCCc--eEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHH
Confidence 8855432 499999888776553210 00 01244555444444444432 3345666
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CHHHHHHHHHHcCCCceeecCCCcccc
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g--~~~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
.++++++.+.|++. ++. +..|. . ...|.+++|.++. + .....+.+.|...++.+..|..+
T Consensus 272 ~~~~~~l~~~L~~~-~~~-~~~~~-----~--------~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~-- 333 (366)
T 1m32_A 272 QQNQRSLVAGMRAL-GFN-TLLDD-----E--------LHSPIITAFYSPEDPQ-YRFSEFYRRLKEQGFVIYPGKVS-- 333 (366)
T ss_dssp HHHHHHHHHHHHHT-TCC-BSSCG-----G--------GBCSSEEEEECCCCTT-CCHHHHHHHHHHTTEECEECCCS--
T ss_pred HHHHHHHHHHHHHC-CCe-eccCc-----h--------hcCceEEEEEcCccCC-CCHHHHHHHHHHCCEEEECCcCC--
Confidence 67888888888876 332 21110 0 1135689999873 2 23445556655557766655321
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..+.|||+++...+++.++.+.++|+
T Consensus 334 ----------------------~~~~iRi~~~~~~~~~~i~~~~~~l~ 359 (366)
T 1m32_A 334 ----------------------QSDCFRIGNIGEVYAADITALLTAIR 359 (366)
T ss_dssp ----------------------SSCEEEEECCSSCCHHHHHHHHHHHH
T ss_pred ----------------------CCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 24789999997655554555555543
No 105
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=1e-24 Score=230.64 Aligned_cols=286 Identities=13% Similarity=0.114 Sum_probs=196.2
Q ss_pred hHHHHHHHHHhhh----C---C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALE----G---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~----g---a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
...+|++++|+++ | . ++++++++|++|+.+++.+++++||+|+++.|+|++.... +...|.++..++
T Consensus 86 g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~ 161 (425)
T 1vp4_A 86 GDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINA----FRQYLANFVVVP 161 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEEEec
Confidence 4677888888888 7 3 3566666667999999999999999999999999986543 445677777765
Q ss_pred C----CCHHHHHHhhcC-------CCeeEEE-EeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----c
Q 009523 273 P----ADMEGLEAALNN-------NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----Q 332 (532)
Q Consensus 273 ~----~dle~Le~al~~-------~~tklV~-lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~ 332 (532)
. .|+++|++++++ .++++|+ +++|+||||.+.+ +++|+++|+++|+++|+|++|+.... .
T Consensus 162 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 241 (425)
T 1vp4_A 162 LEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD 241 (425)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC
T ss_pred cCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc
Confidence 4 379999998864 2589985 7899999999997 56888999999999999999875321 1
Q ss_pred cc--c-ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHHH
Q 009523 333 KA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQ 403 (532)
Q Consensus 333 ~~--l-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~r~~~ 403 (532)
.. + ..+.++++.|+||+++ +| ...|++++++++++.++..........++..++.+...++. +....++
T Consensus 242 ~~~~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (425)
T 1vp4_A 242 PIFKIGGPERVVLLNTFSKVLA-PG-LRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL 319 (425)
T ss_dssp CHHHHHCTTTEEEEEESTTTTC-GG-GCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred CHHHhCCCCCEEEEeccccccc-cc-cceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 11 1 1256799999999999 44 56899999999998887655444334466666666555554 2333444
Q ss_pred HHHHHHHHHHHHHhC-C---CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009523 404 QNSTALRMAKILEAH-P---KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 404 ~~~~a~~la~~L~~~-p---~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
..++++.+.+.|+++ | ++. +..|. .|.++++.++.+ .....+.+.|...++.+..|..
T Consensus 320 ~~~~~~~l~~~L~~~~~~~~g~~-~~~~~----------------~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~ 381 (425)
T 1vp4_A 320 YRRKRTVMLNALEEYFSDIPGVK-WVKSE----------------GGLFIWLTLPEG-FDTWEMFEYAKRKKVFYVPGRV 381 (425)
T ss_dssp HHHHHHHHHHHHHHHSTTSTTCE-ECCCS----------------BSSEEEEECCTT-CCTTTTHHHHHHHTEECEEGGG
T ss_pred HHHHHHHHHHHHHHhCCCCCceE-EecCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCCEEECchh
Confidence 556777888888764 4 342 22221 466899998742 1122333443333666666543
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHHHHHHh
Q 009523 480 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE---DFEDLKADVLQALH 530 (532)
Q Consensus 480 ~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e---d~~dli~dL~~AL~ 530 (532)
+.. . +..++.||||++.. +.+++++.|.++++
T Consensus 382 f~~----~---------------~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 382 FKV----Y---------------DEPSPSMRLSFCLPPDEKIVEGIKRLREVVL 416 (425)
T ss_dssp GCT----T---------------CCCCSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred hcC----C---------------CCCCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 210 0 11357899999974 34555666666654
No 106
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.93 E-value=4.3e-24 Score=224.18 Aligned_cols=284 Identities=13% Similarity=0.089 Sum_probs=194.0
Q ss_pred hHHHHHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~----g--a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...++++++++++ | . ++++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 79 g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 154 (406)
T 1xi9_A 79 GLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGL----VKFYGGKPVEYRT 154 (406)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHHTTCEEEEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeec
Confidence 3567888888876 2 2 4677778888999999999999999999999999885533 3456777776653
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccccc--c
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--L 337 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~--~ 337 (532)
.|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.. ..... .
T Consensus 155 ~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 233 (406)
T 1xi9_A 155 IEEEDWQPDIDDIRKKITD-RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTK 233 (406)
T ss_dssp EGGGTSEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCS
T ss_pred CCCcCCcCCHHHHHHhhCc-CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCC
Confidence 279999999987 7999999999999999987 88999999999999999999875421 11112 3
Q ss_pred CC-cEEEECCccccCCCCCcEEEEEE--eCh----HHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHH
Q 009523 338 GA-DLVLHSATKFIGGHNDVLAGSIS--GSG----KLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNS 406 (532)
Q Consensus 338 ga-Divv~S~sK~lgg~gd~~gG~lv--~~~----~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~ 406 (532)
+. |+++.|+||+++++| ...|+++ +++ ++++.++...... ...++..++.+...++ .+....++..+
T Consensus 234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 311 (406)
T 1xi9_A 234 DVPVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKE 311 (406)
T ss_dssp SSCEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred CceEEEEeccccccCCCc-cEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 56 899999999998555 3468887 888 8998887655433 3445555554444443 23444455567
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CHHHHHHHHHHcC-CCceeecCCCccccc
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTATIKFIDALK-IPYIAPSFGGCESIV 483 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g--~~~~~~~~l~~L~-~~~i~vs~G~~~sl~ 483 (532)
+++.+.+.|++.|++. +..|. .|.++++.++. + .....+.+.|. ..++.+..|..+..
T Consensus 312 ~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~- 372 (406)
T 1xi9_A 312 RRDYIYKRLNEIPGIS-TTKPQ----------------GAFYIFPKIEVGPW-KNDKEFVLDVLHNAHVLFVHGSGFGE- 372 (406)
T ss_dssp HHHHHHHHHHTSTTEE-CCCCC----------------BSSEECCEECSCSC-SSHHHHHHHHHHHHCEECEEGGGGCG-
T ss_pred HHHHHHHHHHhCCCCe-eecCC----------------eeEEEEEecCccCC-CCHHHHHHHHHHhCCEEEeCchhcCC-
Confidence 7788888888776543 21111 24466667763 1 12344555543 44666665543210
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 531 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~~ 531 (532)
..++.||||++.. +.++.++.|.+++++
T Consensus 373 --------------------~~~~~lRis~~~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 373 --------------------YGAGHFRAVFLPPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp --------------------GGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 0257899999931 233445555555543
No 107
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.93 E-value=1.7e-23 Score=217.99 Aligned_cols=284 Identities=16% Similarity=0.085 Sum_probs=192.7
Q ss_pred HHH-HHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVV-VEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~-Le~~lA~l~----g--a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..+ |++++++++ | . ++++++++|++|+.+++.+++++||+|+++.|.|++.... +...|.++..++.
T Consensus 65 ~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~v~~ 140 (390)
T 1d2f_A 65 KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKA----IEGNQRTVMPVAL 140 (390)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHH----HHHTTCEEEEEEC
T ss_pred ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHH----HHHCCCEEEEeec
Confidence 445 777777764 4 2 4677788888999999999999999999999999986543 3456777777653
Q ss_pred --------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----cccccc
Q 009523 274 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL 337 (532)
Q Consensus 274 --------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~ 337 (532)
.|+++|++++++.++++|++++|+||||.+.| +++|+++|+++|+++|+|++|..... .....+
T Consensus 141 ~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 220 (390)
T 1d2f_A 141 EKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV 220 (390)
T ss_dssp EECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGT
T ss_pred ccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHc
Confidence 48999999997546999999999999999988 88999999999999999999875321 111222
Q ss_pred C--C-cEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhh-hcC-CCccHHHHHHHHHhHHH----HHHHHHHHHHH
Q 009523 338 G--A-DLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH-VLG-GALNPNAAYLIIRGMKT----LHLRVQQQNST 407 (532)
Q Consensus 338 g--a-Divv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~-~~G-~~~~~~~a~l~l~~l~t----l~~r~~~~~~~ 407 (532)
. . |. +.|+||.+|.+| ...|+++++ +++++.++.... ... ++.++..++.+...++. +....++..++
T Consensus 221 ~~~~~d~-~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 298 (390)
T 1d2f_A 221 ARGDWAL-LTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDN 298 (390)
T ss_dssp CCSSEEE-EECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chhhHhh-ccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2 2 67 999999998554 457888875 688888876554 223 24566655554444442 33444555677
Q ss_pred HHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCccccccc
Q 009523 408 ALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 408 a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~ 485 (532)
++.+.+.|++ .|++. +..| ..|.+++++++........+.+.|. ..++.+..|..+.
T Consensus 299 ~~~l~~~L~~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---- 357 (390)
T 1d2f_A 299 LTYIADKMNAAFPELN-WQIP----------------QSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYG---- 357 (390)
T ss_dssp HHHHHHHHHHHCSSCC-CCCC----------------SBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC----
T ss_pred HHHHHHHHHhhCCCCE-EecC----------------CccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccC----
Confidence 7888888887 56542 1111 1244568888631012345666665 5677777664431
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVED--FEDLKADVLQALH 530 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed--~~dli~dL~~AL~ 530 (532)
+ ..++.+|||++..+ .++.++.|.++++
T Consensus 358 ~-----------------~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (390)
T 1d2f_A 358 E-----------------EGRGFVRLNAGCPRSKLEKGVAGLINAIR 387 (390)
T ss_dssp G-----------------GGTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred C-----------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 0 02578999999742 2333344444443
No 108
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.93 E-value=2.8e-24 Score=227.29 Aligned_cols=288 Identities=13% Similarity=0.067 Sum_probs=195.8
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHH--HHHHHHhcc--C----------CCEEEEcCCCCcchHHHHHHhcccC
Q 009523 201 PTTVVVEEKMSALEGA--ESTVIMASGMSAS--TVMLLALVP--A----------GGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai--~~al~all~--~----------Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
....+|+++||++++. ++.++++++++++ .+++.+++. | ||+|+++.|+|.+... .++..
T Consensus 78 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~----~~~~~ 153 (427)
T 3ppl_A 78 DGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS----ITERF 153 (427)
T ss_dssp SCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH----HHHHT
T ss_pred CCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH----HHHHc
Confidence 3567899999999986 3566666667899 578888877 6 9999999999998654 34556
Q ss_pred CcEEEEeCCC----CHHHHHHhhcCCCeeEEEEe-CCCCCCCcccCHH---HHHHHH-HhCCCEEEEECCCCCCCc----
Q 009523 265 GITATVIDPA----DMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 265 Gv~v~~vd~~----dle~Le~al~~~~tklV~le-sP~NptG~v~dl~---~I~~la-~~~gi~lIvDet~a~~~~---- 331 (532)
|.++..++.+ |+++|+++++..++++|+++ +|+||||.+++.+ +|+++| +++|+++|+|++|+....
T Consensus 154 g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~ 233 (427)
T 3ppl_A 154 GFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEF 233 (427)
T ss_dssp TCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCC
Confidence 8887777543 89999999954479999976 7899999999977 888888 999999999999875211
Q ss_pred ---cccc-------ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-----
Q 009523 332 ---QKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----- 396 (532)
Q Consensus 332 ---~~~l-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----- 396 (532)
.+.. ..+.++++.|+||+++ +| ...|++++++++++.++......+...++..+..+...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 311 (427)
T 3ppl_A 234 PEVIDIVGLGEAAGNPNRFWAFTSTSKITL-AG-AGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVR 311 (427)
T ss_dssp CCCCCHHHHHHHTTCTTSEEEEEESTTTSC-TT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHH
T ss_pred CCccchhhhhhccCCCCcEEEEechhhccC-cC-ccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHH
Confidence 1111 2357799999999944 33 45789999999999988776666655666655554444332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhC-C---CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC
Q 009523 397 --LHLRVQQQNSTALRMAKILEAH-P---KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 470 (532)
Q Consensus 397 --l~~r~~~~~~~a~~la~~L~~~-p---~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~ 470 (532)
+....+...++.+.+.+.|.++ + .+ .+..|. .|.++++.+++. ....+.+.|...
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~-~~~~p~----------------~g~~~~~~~~~~--~~~~~~~~l~~~ 372 (427)
T 3ppl_A 312 AVMRKHAASLAPKFNKVLEILDSRLAEYGVA-QWTVPA----------------GGYFISLDVVPG--TASRVAELAKEA 372 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGTCC-EECCCS----------------BSSCEEEECSTT--CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCce-EEeCCC----------------ccEEEEEECCcc--hHHHHHHHHHHC
Confidence 2222223334555566666542 2 22 222231 467899999753 244566666666
Q ss_pred ceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009523 471 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 530 (532)
Q Consensus 471 ~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed---~~dli~dL~~AL~ 530 (532)
++.+..|+.+... . .+..++.||||++..+ .++.++.|.++++
T Consensus 373 gv~v~~~g~~~~~---~--------------~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 373 GIALTGAGSSYPL---R--------------QDPENKNLRLAPSLPPVEELEVAMDGVATCVL 418 (427)
T ss_dssp TEECCCTTTTSGG---G--------------CCTTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred CCEEecCcCcCCC---C--------------CCCCCCeEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 8888875432110 0 0113689999999754 3444555555554
No 109
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.93 E-value=2.8e-24 Score=227.09 Aligned_cols=290 Identities=13% Similarity=0.152 Sum_probs=196.8
Q ss_pred CCCCchh-HHHHHHHHHhhhC--------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC
Q 009523 196 GRYGNPT-TVVVEEKMSALEG--------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 196 ~R~~~p~-~~~Le~~lA~l~g--------a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
.+|+++. ..+|++++|++++ . +..+++++|++++..++.+++++||+|++++|+|++... ......
T Consensus 77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~~ 153 (428)
T 1iay_A 77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR---DLRWRT 153 (428)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH---HTTTTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH---HHHHhc
Confidence 4566665 7889999999876 2 345666666699999999999999999999999998542 133456
Q ss_pred CcEEEEeCCC-------CHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCC
Q 009523 265 GITATVIDPA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 265 Gv~v~~vd~~-------dle~Le~al~~-----~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~ 329 (532)
|+++..++.+ |+++|++++++ .++++|++++|+||||.+.| +++|+++|+++|+++|+|++|...
T Consensus 154 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 154 GVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp CCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred CCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 8888887642 78999988863 26999999999999999999 889999999999999999998652
Q ss_pred Cc----c-c--ccccC-------Cc--EEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHH
Q 009523 330 LN----Q-K--ALSLG-------AD--LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR 392 (532)
Q Consensus 330 ~~----~-~--~l~~g-------aD--ivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~ 392 (532)
.. . . .+... .| +++.|+||.+|.+| ...|++++ ++++++.++.....+ ..++..+.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~ 310 (428)
T 1iay_A 234 VFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARKMSSFG--LVSTQTQYFLAA 310 (428)
T ss_dssp CCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHHHHTTS--CCCHHHHHHHHH
T ss_pred ccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHHHHhcc--cCCHHHHHHHHH
Confidence 11 1 1 11112 57 89999999998555 45688887 678888887654433 234444444443
Q ss_pred hHHH-------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----HHHH
Q 009523 393 GMKT-------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTAT 460 (532)
Q Consensus 393 ~l~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-----~~~~ 460 (532)
.++. +....++..++++.+.+.|+++ ++. + ++. ..|.++++++++. ....
T Consensus 311 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~---------------~~g~~~~~~~~~~~~~~~~~~~ 372 (428)
T 1iay_A 311 MLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIK-C-LKN---------------NAGLFCWMDLRPLLRESTFDSE 372 (428)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-B-CCC---------------SSSSEEEEECGGGCSSSSHHHH
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCC---------------CeeEEEEEechhhcCCCchhHH
Confidence 3332 2334445557778888888876 332 2 111 1366889988642 1234
Q ss_pred HHHHHHcCC-CceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHh
Q 009523 461 IKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALH 530 (532)
Q Consensus 461 ~~~l~~L~~-~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~---ed~~dli~dL~~AL~ 530 (532)
..+.+.|.. .++.+..|+.+.. ..++++||+++. ++.+.+++.|.++++
T Consensus 373 ~~l~~~l~~~~gi~v~~~~~~~~---------------------~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 373 MSLWRVIINDVKLNVSPGSSFEC---------------------QEPGWFRVCFANMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp HHHHHHHHHTSCEECEEGGGGTC---------------------SSSSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 466666643 3777766543210 015789999993 234445555555554
No 110
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=3.5e-24 Score=223.49 Aligned_cols=305 Identities=14% Similarity=0.102 Sum_probs=213.1
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
..++...+|++++++++|.+++++++||++|+..++.++ +++||+|+++.++|+++... +...|.++.+++.+
T Consensus 53 ~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~ 128 (391)
T 3dr4_A 53 SVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANS----VTYCGATPVLVDNDPR 128 (391)
T ss_dssp SCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTT
T ss_pred CCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHH----HHHCCCEEEEEecCcc
Confidence 357889999999999999999999999999999999999 99999999999999987543 34568888888754
Q ss_pred ----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--CcEEEECCc-
Q 009523 275 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT- 347 (532)
Q Consensus 275 ----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aDivv~S~s- 347 (532)
|+++|++++++ ++++|+ |+||||.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|++
T Consensus 129 ~~~~d~~~l~~~~~~-~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~ 204 (391)
T 3dr4_A 129 TFNLDAAKLEALITP-RTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFG 204 (391)
T ss_dssp TCSBCGGGSGGGCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBT
T ss_pred ccCcCHHHHHHhcCC-CceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCC
Confidence 78999999987 799888 5789999999999999999999999999998865433222222 478888855
Q ss_pred -cccCCCCCcEEEEEEeC-hHHHHHHHHHhhhc--------------CCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009523 348 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 411 (532)
Q Consensus 348 -K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~--------------G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~l 411 (532)
|+++++ .+|+++.+ +++.+.++...... ...+.+..+.+.+..++.+....++..++++++
T Consensus 205 ~K~l~~g---~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l 281 (391)
T 3dr4_A 205 NAIITTG---EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWY 281 (391)
T ss_dssp TSSSCCB---SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcCCcC---CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999873 37777765 45777666543211 123455666655555666666677777888888
Q ss_pred HHHHHhCCCceEEeC--CCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccccccCcc
Q 009523 412 AKILEAHPKVKRVHY--PGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 412 a~~L~~~p~v~~V~~--Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
.+.|++. ++..... +... ...+.++++.++.. ......+.+.|...++.++.|. ..+.+.|..
T Consensus 282 ~~~L~~~-g~~~~~~~~~~~~------------~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~-~p~~~~~~~ 347 (391)
T 3dr4_A 282 EQKLARL-GNRVTKPHVALTG------------RHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVF-HPMHIMPPY 347 (391)
T ss_dssp HHHHGGG-TTSEECCCCCTTS------------CCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECC-CCGGGSGGG
T ss_pred HHHhhcC-CccccCcCCCCCC------------cceeEEEEEEECCccchhHHHHHHHHHHCCCceeecC-CccccChhh
Confidence 8888876 5433222 1100 11234677877641 1224456666655577777553 223333332
Q ss_pred ccc--cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 489 MSY--WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 489 ~s~--~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+ ..++.... +.++.|||+++...+++.++.+.++|++
T Consensus 348 ~~~~~~~~~~~~~----~~~~~lrl~~~~~~t~edi~~~~~~l~~ 388 (391)
T 3dr4_A 348 AHLATDDLKIAEA----CGVDGLNLPTHAGLTEADIDRVIAALDQ 388 (391)
T ss_dssp GGGCCTTCHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred hhcCcCCChHHHH----HHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 111 11222111 1246899999988888888888888765
No 111
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=8.4e-24 Score=222.34 Aligned_cols=285 Identities=14% Similarity=0.136 Sum_probs=196.2
Q ss_pred hHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 202 TTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga--------~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
...+++++++++++. +++++++||++|+..++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 80 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 155 (409)
T 2gb3_A 80 GIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAF----AKIAGVKLIPVTR 155 (409)
T ss_dssp CCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHHTCEEEEEEC
T ss_pred CcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecc
Confidence 456788888887641 5678888888999999999999999999999999986543 4456788887765
Q ss_pred CC------HHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----ccccc--cC
Q 009523 274 AD------MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--LG 338 (532)
Q Consensus 274 ~d------le~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----~~~l~--~g 338 (532)
++ +++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++++.... ...+. .+
T Consensus 156 ~~~~~~~~~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~ 234 (409)
T 2gb3_A 156 RMEEGFAIPQNLESFINE-RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESD 234 (409)
T ss_dssp CGGGTSCCCTTGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCT
T ss_pred CCCCCCccHHHHHHhhCc-CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCC
Confidence 42 7888988877 7999999999999999975 78999999999999999999875421 11122 36
Q ss_pred CcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHH
Q 009523 339 ADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAK 413 (532)
Q Consensus 339 aDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~~~~~a~l~l~~l~----tl~~r~~~~~~~a~~la~ 413 (532)
.|+++.|+||++|.+| ...|++++++ ++++.++....... ..++..++.+...++ .+....++..++++.+.+
T Consensus 235 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 2gb3_A 235 KVVVIDSVSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLK 312 (409)
T ss_dssp TEEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecchhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999998554 4578999988 89888877655443 556665555544442 234444556677788888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC------ceeecCCCcccccccCc
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP------YIAPSFGGCESIVDQPA 487 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~------~i~vs~G~~~sl~~~pa 487 (532)
.|+++ ++..+..| ..|.++++.+++ .....+.+.|... ++.+..|..+.. .
T Consensus 313 ~L~~~-g~~~~~~~----------------~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~--~-- 369 (409)
T 2gb3_A 313 KLEEH-GLKRFTKP----------------SGAFYITAELPV--EDAEEFARWMLTDFNMDGETTMVAPLRGFYL--T-- 369 (409)
T ss_dssp HHHHT-TCCCBCCC----------------SBSSEEEEECSS--SCHHHHHHHHHHSCCBTTEEEECEEGGGGCS--S--
T ss_pred HHHHc-CceeeeCC----------------CeeEEEEEEeCC--CCHHHHHHHHHhccccccCcEEEeCchHhCC--C--
Confidence 88876 33210111 135577778863 1234455555432 666665533210 0
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
.+..++.+||+++. ++.+++++.|.++++
T Consensus 370 --------------~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 400 (409)
T 2gb3_A 370 --------------PGLGKKEIRIACVLEKDLLSRAIDVLMEGLK 400 (409)
T ss_dssp --------------TTTTSSEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 01236799999994 223445555555554
No 112
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.6e-23 Score=220.06 Aligned_cols=253 Identities=15% Similarity=0.151 Sum_probs=176.6
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 203 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga----~-~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
..+|++++++++ |. + +++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 64 ~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~----~~~~g~~~~~v~~ 139 (411)
T 2o0r_A 64 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPV----VAMAGAHRVTVPL 139 (411)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH----HHHcCCEEEEeec
Confidence 467777777775 52 3 677777778999999999999999999999999986543 4456777777653
Q ss_pred --------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCc-------cccc
Q 009523 274 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN-------QKAL 335 (532)
Q Consensus 274 --------~dle~Le~al~~~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~-------~~~l 335 (532)
.|+++|++++++ ++++|++++|+||||.+.|. ++|+++|+++|+++|+|++|+.... ...+
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 218 (411)
T 2o0r_A 140 VPDGRGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGF 218 (411)
T ss_dssp EEETTEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred cccccCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhc
Confidence 489999999987 79999999999999999874 8999999999999999999875321 1111
Q ss_pred --ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHH
Q 009523 336 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTAL 409 (532)
Q Consensus 336 --~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t----l~~r~~~~~~~a~ 409 (532)
..+.|+++.|+||.++.+| ...|++++++++++.+.......+...++.....+...++. +....++..++++
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 219 DGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD 297 (411)
T ss_dssp TTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 1467999999999998665 46799999999988887655433333333333333333332 3344455557777
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcC-CCceeecCCCc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALK-IPYIAPSFGGC 479 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~-~~~i~vs~G~~ 479 (532)
.+.+.|++. ++. +..|. .|.++++.++.. ......+.+.|. ..++.+..|..
T Consensus 298 ~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 351 (411)
T 2o0r_A 298 RLAAGLTEI-GFA-VHDSY----------------GTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSA 351 (411)
T ss_dssp HHHHHHHHH-TCE-ECCCC----------------BSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGG
T ss_pred HHHHHHHHc-CCE-ecCCC----------------eeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhh
Confidence 788888765 332 22121 355889988641 011334555442 34666666644
No 113
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.92 E-value=1.1e-23 Score=219.31 Aligned_cols=302 Identities=18% Similarity=0.187 Sum_probs=210.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
..+...++++++++++|.+++++++||++|+..++.++ +++||+|+++.++|+++... ++..|++++.++.
T Consensus 37 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~ 112 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNM----IVLLGANPVMVDVDRDT 112 (393)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHH----HHHCCCEEEEEeccCCc
Confidence 45889999999999999999999999999999999999 99999999999999986543 4457888888763
Q ss_pred --CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC-CcEEEECCc--c
Q 009523 274 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG-ADLVLHSAT--K 348 (532)
Q Consensus 274 --~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g-aDivv~S~s--K 348 (532)
.|+++|++++++ ++++|+++ ||+|.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|+| |
T Consensus 113 ~~~d~~~l~~~l~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K 188 (393)
T 1mdo_A 113 LMVTPEHIEAAITP-QTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIK 188 (393)
T ss_dssp CCBCHHHHHHHCCT-TEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTS
T ss_pred CCCCHHHHHHhcCC-CceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCC
Confidence 378999999987 79999874 58999999999999999999999999999865332222345 899999999 9
Q ss_pred ccCCCCCcEEEEEEeC-hHHHHHHHHHhhhc----------------------C--CCccHHHHHHHHHhHHHHHHHHHH
Q 009523 349 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------------------G--GALNPNAAYLIIRGMKTLHLRVQQ 403 (532)
Q Consensus 349 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~----------------------G--~~~~~~~a~l~l~~l~tl~~r~~~ 403 (532)
+++|+ .+|+++.+ +++++.++...... | ..+++..+.++...++.+....++
T Consensus 189 ~l~~~---~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~ 265 (393)
T 1mdo_A 189 NITCA---EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNAR 265 (393)
T ss_dssp SSCSS---SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred ccccc---cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99864 47888886 78888876543210 1 124666666666667767777777
Q ss_pred HHHHHHHHHHHHHhCCCceEEeC-CCCCCCchhhhHhhhcCCcccEEEEEEcC---CHHHHHHHHHHcCCCceeecCCCc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHY-PGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALKIPYIAPSFGGC 479 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~-Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---~~~~~~~~l~~L~~~~i~vs~G~~ 479 (532)
..++++++.+.|.+.+ +. +.. |.. .. .+.+.+++|.++. + .....+.+.|...++.++.|..
T Consensus 266 ~~~~~~~l~~~L~~~~-~~-~~~~~~~-~~----------~~~~~~~~v~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~ 331 (393)
T 1mdo_A 266 RAAIAAQYHQAMADLP-FQ-PLSLPSW-EH----------IHAWHLFIIRVDEARCG-ITRDALMASLKTKGIGTGLHFR 331 (393)
T ss_dssp HHHHHHHHHHHHHTSS-CE-ECCCCSS-CE----------ECCCSCEEEECCHHHHS-SCHHHHHHHHHHTTBCCBCCCC
T ss_pred HHHHHHHHHHHHhcCC-cc-cccCCCC-CC----------CceeEEEEEEecccccc-cCHHHHHHHHHhCCCCcccccC
Confidence 7788889999998876 43 221 210 00 1234578888862 1 1244566666556777776643
Q ss_pred ccccccCcccc---ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 480 ESIVDQPAIMS---YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 480 ~sl~~~pa~~s---~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.. ...|.... ...++...+ +..+.|||+++...+++.++.+.++|+
T Consensus 332 ~~-~~~~~~~~~~~~~~~~~~~~----~~~~~lRi~~~~~~t~~~i~~~~~~l~ 380 (393)
T 1mdo_A 332 AA-HTQKYYRERFPTLTLPDTEW----NSERICSLPLFPDMTESDFDRVITALH 380 (393)
T ss_dssp CG-GGSHHHHHHSTTCCCHHHHH----HHTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cc-ccChhhhccCCccCChhHHH----HHhCEEEecCCCCCCHHHHHHHHHHHH
Confidence 21 00010000 000111000 124689999996555555555555554
No 114
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=5.8e-24 Score=221.36 Aligned_cols=294 Identities=15% Similarity=0.138 Sum_probs=198.2
Q ss_pred CCCCCchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
|+.+..+...++++++++++|.+ +++++++|++|+..++.+++++||+|+++.++|++.. +...++..|++++.+
T Consensus 45 ~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 45 FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTI 122 (396)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEe
Confidence 44444456889999999999974 3556677889999999999999999999999998853 123456678888887
Q ss_pred CC-----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEEC
Q 009523 272 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 345 (532)
Q Consensus 272 d~-----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S 345 (532)
+. .|+++|+++++++++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. .......++|+++.|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 202 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTG 202 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECC
T ss_pred cCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEc
Confidence 63 489999999875358999999999999999999999999999999999999987432 122234578999999
Q ss_pred CccccCCCCCcEEEEEEeChHHHHHHHHHh-----------------------hhcCCCccHHHHHHHHHhHHH-----H
Q 009523 346 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----------------------HVLGGALNPNAAYLIIRGMKT-----L 397 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----------------------~~~G~~~~~~~a~l~l~~l~t-----l 397 (532)
++|+++++.+ .|+++.++++++.++... ....++.+......+...++. +
T Consensus 203 ~~K~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 280 (396)
T 2ch1_A 203 AQKVLGAPPG--ITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGL 280 (396)
T ss_dssp CC-CCCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCccccCCCC--eEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhH
Confidence 9998776543 388888988887764310 001122344333333333333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecC
Q 009523 398 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSF 476 (532)
Q Consensus 398 ~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~-~~i~vs~ 476 (532)
....++..++++++.+.|+++ ++. +..|. ..+ ..+.+++|.++.+ .....+.+.|.. .++.+..
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~~~--------~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~ 345 (396)
T 2ch1_A 281 ENQIKRRIECAQILYEGLGKM-GLD-IFVKD----PRH--------RLPTVTGIMIPKG-VDWWKVSQYAMNNFSLEVQG 345 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCC-BSSCS----GGG--------BCTTEEEEECCTT-CCHHHHHHHHHHHHCBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCe-eccCC----ccc--------cCCceEEEEcCCC-CCHHHHHHHHHHhCCEEEec
Confidence 345566667788888888875 332 21111 000 1356889988632 123445555432 2555554
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cC----CCHHHHHHHHHHHHh
Q 009523 477 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GV----EDFEDLKADVLQALH 530 (532)
Q Consensus 477 G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv-G~----ed~~dli~dL~~AL~ 530 (532)
|.. + ..++.|||++ +. |+.+.+++.|.++++
T Consensus 346 g~~------~-----------------~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 346 GLG------P-----------------TFGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp CCG------G-----------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred Ccc------c-----------------cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 421 0 1257899999 63 345666666666664
No 115
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.92 E-value=2e-23 Score=219.45 Aligned_cols=283 Identities=11% Similarity=0.085 Sum_probs=191.0
Q ss_pred hhHHHHHHHHHhhhC--------------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 201 PTTVVVEEKMSALEG--------------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 201 p~~~~Le~~lA~l~g--------------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
....++++++|++++ .++++++++|++|+.+++.+++++||+|+++.++|++... .++..|+
T Consensus 75 ~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~ 150 (416)
T 1bw0_A 75 VGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET----VCKAYGI 150 (416)
T ss_dssp TCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHTTC
T ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH----HHHHcCc
Confidence 356788999998887 2467777777899999999999999999999999998653 3455677
Q ss_pred EEEEeCC-------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----
Q 009523 267 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----- 331 (532)
Q Consensus 267 ~v~~vd~-------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~----- 331 (532)
++..++. .|+++|++++++ ++++|++++|+||||.+.| +++|+++|+++|+++|+|++|.....
T Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 229 (416)
T 1bw0_A 151 GMHFYNCRPENDWEADLDEIRRLKDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDP 229 (416)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCT
T ss_pred EEEEeecCcccCCCCCHHHHHHHhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 7776652 378999999987 6999999999999999999 88999999999999999999875321
Q ss_pred ---c-cccc---cCCcEEEECCccccCCCCCcEEEEEEeCh--HHHHHHH----HHhhhcCCCccHHHHHHHHHhHH---
Q 009523 332 ---Q-KALS---LGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIR----NLHHVLGGALNPNAAYLIIRGMK--- 395 (532)
Q Consensus 332 ---~-~~l~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~----~~~~~~G~~~~~~~a~l~l~~l~--- 395 (532)
. .... .+.++++.|+||.++.+| ...|++++++ ++++.+. .... .....++..++.+...++
T Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~ 307 (416)
T 1bw0_A 230 NATFTSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLNTP 307 (416)
T ss_dssp TCCCCCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHSSC
T ss_pred CCCccCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHhccc
Confidence 1 1111 123588999999987665 3467887755 2444333 2221 122345555555554443
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHc-C
Q 009523 396 --TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-K 468 (532)
Q Consensus 396 --tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----~~~~~~~l~~L-~ 468 (532)
.+....++..++++.+.+.|+++|++. +..|. .|.++++.++.. ......+.+.| +
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (416)
T 1bw0_A 308 QEHLDQIVAKIEESAMYLYNHIGECIGLA-PTMPR----------------GAMYLMSRIDLEKYRDIKTDVEFFEKLLE 370 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECCCC----------------BTTEEEEEECGGGBSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCC----------------eeEEEEEeCCHHHcCCCCCHHHHHHHHHH
Confidence 344455666678888888888776654 32221 356788888521 01234455544 3
Q ss_pred CCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009523 469 IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 530 (532)
Q Consensus 469 ~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL~ 530 (532)
..++.+..|..+. .++.+|||++.. +.++.++.|.++++
T Consensus 371 ~~gi~v~~g~~f~-----------------------~~~~iRis~~~~~e~l~~~l~~l~~~l~ 411 (416)
T 1bw0_A 371 EENVQVLPGTIFH-----------------------APGFTRLTTTRPVEVYREAVERIKAFCQ 411 (416)
T ss_dssp HHCEECEEGGGGT-----------------------CTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred HCCEEEecccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 4466666554321 146899999852 23344444455543
No 116
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.92 E-value=7e-24 Score=216.31 Aligned_cols=284 Identities=13% Similarity=0.108 Sum_probs=194.9
Q ss_pred hhHHHHHHHHHhhhCCC---c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 201 PTTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
+...++++++++++|.+ + .+++++|++|+..++.++++ |+|+++++.|++. . +...++..|+++..++.
T Consensus 33 ~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~-~-~~~~~~~~g~~~~~v~~~~~ 108 (353)
T 2yrr_A 33 RVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQ-R-VAEMAALHGLDPEVLDFPPG 108 (353)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHH-H-HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchH-H-HHHHHHHcCCceEEEeCCCC
Confidence 44788999999999973 4 45556778999999998876 8999999999875 2 22445667888888764
Q ss_pred --CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCcccc
Q 009523 274 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 350 (532)
Q Consensus 274 --~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~sK~l 350 (532)
.|+++|+++++++++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|++|++
T Consensus 109 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 188 (353)
T 2yrr_A 109 EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCL 188 (353)
T ss_dssp SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTT
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccc
Confidence 4799999998753589999999999999999999999999999999999999864322 2223457899999999977
Q ss_pred CCCCCcEEEEEEeChHHHHHHHH-------------H--hhhcCCCccHHHHHHHHHhHHH-----HHHHHHHHHHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRN-------------L--HHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALR 410 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~-------------~--~~~~G~~~~~~~a~l~l~~l~t-----l~~r~~~~~~~a~~ 410 (532)
+++.+ .|++++++++++.++. . .....++.+......+...++. +....++..+++++
T Consensus 189 ~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 266 (353)
T 2yrr_A 189 SAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAW 266 (353)
T ss_dssp CCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 65432 4899999988876641 0 1122234455444433333333 33445666678888
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s 490 (532)
+.+.|++. ++. +..|. ...+.+++|.++.+ .....+.+.|...++.+..|..+
T Consensus 267 l~~~L~~~-g~~-~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~---------- 319 (353)
T 2yrr_A 267 VLEELKAR-GFR-PYPKA--------------SPLPTVLVVRPPEG-VDADRLVRALYAEGVAVAGGIGP---------- 319 (353)
T ss_dssp HHHHHHHT-TCE-ESCSS--------------SBCTTEEEEECCTT-CCHHHHHHHHHHTTEECEECCGG----------
T ss_pred HHHHHHHC-CCc-cccCc--------------cCCCeEEEEECCCC-CCHHHHHHHHHHCCEEEeCCccc----------
Confidence 88888876 543 22121 01356788988632 12345566665557777666421
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEec-C---CCHH-HHHHHHHHHHh
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFG-V---EDFE-DLKADVLQALH 530 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG-~---ed~~-dli~dL~~AL~ 530 (532)
..++.+|||++ . ++.+ .+++.|.++++
T Consensus 320 -------------~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 320 -------------TRGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp -------------GTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred -------------cCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 02468999993 2 3344 55666666654
No 117
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=2.1e-23 Score=215.79 Aligned_cols=286 Identities=14% Similarity=0.147 Sum_probs=195.1
Q ss_pred hHHHHHHHHHhhhCC------CcEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCC-CCcchHHHHHHhcccCCcEEEEe
Q 009523 202 TTVVVEEKMSALEGA------ESTVIMASGMSASTVMLLALV---PAGGHIVTTTD-CYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga------~~~i~~sSG~~Ai~~al~all---~~Gd~VIv~~~-~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
...+++++++++++. +++++++||++|+.+++.++. ++||+|++..+ .|+... ...++..|.+++.+
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v 115 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVV 115 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEE
Confidence 356688888888875 346677788899999999997 89999988744 554432 13455678898888
Q ss_pred CC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEECCCCCCC-cccccccCCcEE
Q 009523 272 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPL-NQKALSLGADLV 342 (532)
Q Consensus 272 d~------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~--gi~lIvDet~a~~~-~~~~l~~gaDiv 342 (532)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+. ..+....++|++
T Consensus 116 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~ 195 (385)
T 2bkw_A 116 RPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFA 195 (385)
T ss_dssp CCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEE
T ss_pred ecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEE
Confidence 76 3799999999753589999999999999999999999999999 99999999987442 223334578999
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHH-HHH------------------HH--hhhcC-----CCccHHHHHHHHHhHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVT-QIR------------------NL--HHVLG-----GALNPNAAYLIIRGMKT 396 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~-~l~------------------~~--~~~~G-----~~~~~~~a~l~l~~l~t 396 (532)
+.|+||+++++.+ .|++++++++++ .++ .. ....+ ++.+....+.+...++.
T Consensus 196 ~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 273 (385)
T 2bkw_A 196 LTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE 273 (385)
T ss_dssp EEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred EecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999997765432 388888888776 442 11 01111 23455444433334433
Q ss_pred -----HHHHHHHHHHHHHHHHHHH-HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC
Q 009523 397 -----LHLRVQQQNSTALRMAKIL-EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 470 (532)
Q Consensus 397 -----l~~r~~~~~~~a~~la~~L-~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~ 470 (532)
+....++..++++++.+.| ++. ++. +..|. +.. ...+++++|.+++ ...+.+.|...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~-~~~~~----~~~-------~~~~~~~~~~~~~----~~~~~~~l~~~ 336 (385)
T 2bkw_A 274 ILEEGLHKRWDLHREMSDWFKDSLVNGL-QLT-SVSRY----PSN-------MSAHGLTAVYVAD----PPDVIAFLKSH 336 (385)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCE-ESSCS----SST-------TBCSSCEEEECSC----HHHHHHHHHHT
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhc-Cce-ecccC----ccc-------ccCCceEEEecCC----HHHHHHHHHHC
Confidence 3344566667888888888 765 442 22221 000 0146789999874 34556666555
Q ss_pred ceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE-ec-------CCCHHHHHHHHHHHHhh
Q 009523 471 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS-FG-------VEDFEDLKADVLQALHA 531 (532)
Q Consensus 471 ~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS-vG-------~ed~~dli~dL~~AL~~ 531 (532)
++.++.|..+ ...++.+||| ++ .|+.+.+++.|.+++++
T Consensus 337 gi~v~~g~~~----------------------~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 337 GVVIAGGIHK----------------------DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp TEECBCCCCT----------------------TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CeEEeCCCCc----------------------ccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 7777665321 0124689999 76 25667777888777654
No 118
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.2e-23 Score=220.98 Aligned_cols=273 Identities=13% Similarity=0.103 Sum_probs=189.1
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 203 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga----~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
..+|++++++++ |. ++++++++|++|+..++.+++++||+|++++|.|++.... +...|.++..++.
T Consensus 97 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~ 172 (447)
T 3b46_A 97 RPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPN----IELCGGKVVYVPIN 172 (447)
T ss_dssp CHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEeCC
Confidence 467777777775 42 3567777778999999999999999999999999986543 3445766665541
Q ss_pred ----------------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 274 ----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 274 ----------------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
.|+++|++++++ ++++|++++|+||||.+.+ +++|+++|++||+++|+|++|.....
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~ 251 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS 251 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC
T ss_pred CccccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC
Confidence 378999999986 7999999999999999975 88999999999999999999875321
Q ss_pred ---cccc---ccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HH
Q 009523 332 ---QKAL---SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LH 398 (532)
Q Consensus 332 ---~~~l---~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~ 398 (532)
...+ ..+.|+++.|+||+++.+| ...|++++ ++++++.++........+.++..++++...++. +.
T Consensus 252 ~~~~~~~~~~~~~~~i~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~ 330 (447)
T 3b46_A 252 FTRIATLSPEIGQLTLTVGSAGKSFAATG-WRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFE 330 (447)
T ss_dssp CCCGGGSCHHHHTTEEEEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcCHHHcCCCCCCcEEEEecCchhcCCcc-hhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHH
Confidence 1112 2478999999999998665 35799999 999998887655434444455555444444443 22
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC--------------HHHHHHHH
Q 009523 399 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--------------LTATIKFI 464 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~--------------~~~~~~~l 464 (532)
...++..++++.+.+.|+++ ++. +..|. .|.+++++++.. ......|.
T Consensus 331 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 392 (447)
T 3b46_A 331 KMRQEYINKFKIFTSIFDEL-GLP-YTAPE----------------GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRIS 392 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCC-EECCS----------------BSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----------------eeEEEEEecccccCccccccccccccCCCHHHHH
Confidence 33445556777788888775 332 22221 366888888631 12344566
Q ss_pred HHcC-CCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 465 DALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 465 ~~L~-~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
+.|. ..++.+..|+.+... +. .+..+++||||++.
T Consensus 393 ~~l~~~~gV~v~pg~~f~~~--~~--------------~~~~~~~iRls~~~ 428 (447)
T 3b46_A 393 HWLINELGVVAIPPTEFYIK--EH--------------EKAAENLLRFAVCK 428 (447)
T ss_dssp HHHHHHTCEECBCGGGGSCG--GG--------------GGGGTTEEEEECCS
T ss_pred HHHHHhCCEEEECchHhCCC--Cc--------------cCCCCCEEEEEEeC
Confidence 6553 357777776543210 00 00125799999996
No 119
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.92 E-value=1.7e-23 Score=220.61 Aligned_cols=288 Identities=10% Similarity=0.076 Sum_probs=194.1
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHHH--HHHHHhcc--C---------CCEEEEcCCCCcchHHHHHHhcccCC
Q 009523 201 PTTVVVEEKMSALEGA--ESTVIMASGMSAST--VMLLALVP--A---------GGHIVTTTDCYRKTRIFIETVLPKMG 265 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~--~al~all~--~---------Gd~VIv~~~~y~~t~~~~~~~l~~~G 265 (532)
+...+|+++||++++. ++.+++++|++++. +++.+++. + ||+|+++.|+|.+.... +...|
T Consensus 70 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g 145 (423)
T 3ez1_A 70 AGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLL----LQTLG 145 (423)
T ss_dssp TCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHH----HHHHT
T ss_pred CChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHH----HHHcC
Confidence 4467899999999986 35666677779997 88888887 8 59999999999886543 44457
Q ss_pred cEEEEeCC----CCHHHHHHhhc-CCCeeEEEEe-CCCCCCCcccCHH---HHHHHH-HhCCCEEEEECCCCCCCc----
Q 009523 266 ITATVIDP----ADMEGLEAALN-NNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 266 v~v~~vd~----~dle~Le~al~-~~~tklV~le-sP~NptG~v~dl~---~I~~la-~~~gi~lIvDet~a~~~~---- 331 (532)
.++..++. .|+++|+++++ ..++++|+++ +|+||||.+++.+ +|+++| +++|+++|+|++|.....
T Consensus 146 ~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~ 225 (423)
T 3ez1_A 146 FELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEED 225 (423)
T ss_dssp CEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSS
T ss_pred CEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCC
Confidence 77777654 38999999994 2379999865 8999999999977 788888 899999999999873211
Q ss_pred ----cccc-------ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----
Q 009523 332 ----QKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---- 396 (532)
Q Consensus 332 ----~~~l-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---- 396 (532)
.... ..+.++++.|+||.+.+ | ...|++++++++++.++......+...++..+..+...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (423)
T 3ez1_A 226 RAEPVNFVVLARDAGYPDRAFVFASTSKITFA-G-AGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGG 303 (423)
T ss_dssp CCCCCCHHHHHHHHTCTTSEEEEEESTTTSCS-S-SSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTH
T ss_pred CCCCcchhhhhhccCCCCeEEEEeCchhhccC-C-cceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccch
Confidence 0111 23567999999997433 3 45789999999999998877666666677666655554444
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHh-CCCc---eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC
Q 009523 397 ----LHLRVQQQNSTALRMAKILEA-HPKV---KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK 468 (532)
Q Consensus 397 ----l~~r~~~~~~~a~~la~~L~~-~p~v---~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~ 468 (532)
+....+...++.+.+.+.|.+ .+.+ ..+..|. .|.++++.+++. ....+.+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~--~~~~~~~~l~ 365 (423)
T 3ez1_A 304 LEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK----------------GGYFISLDTAEP--VADRVVKLAE 365 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCS----------------BSSCEEEEESSS--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCC----------------ccEEEEEECCCC--cHHHHHHHHH
Confidence 111122223444555555543 2221 2333332 467899999753 2345555666
Q ss_pred CCceeecC-CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009523 469 IPYIAPSF-GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 530 (532)
Q Consensus 469 ~~~i~vs~-G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed---~~dli~dL~~AL~ 530 (532)
..++.+.. |..+... .+..++.||||++..+ .++.++.|.++++
T Consensus 366 ~~gv~v~~~g~~~~~~------------------~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 366 AAGVSLTPAGATYPAG------------------QDPHNRNLRLAPTRPPVEEVRTAMQVVAACIR 413 (423)
T ss_dssp HTTEECCCTTTTSSTT------------------CCSSSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred HCCcEEecCcccccCC------------------CCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 66888877 4332110 0113689999999644 3444555555554
No 120
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.92 E-value=1.2e-23 Score=217.12 Aligned_cols=303 Identities=16% Similarity=0.176 Sum_probs=204.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al---l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.+...+++++|++++|.+++++++||++|+..++.++ +++||+|+++.++|+++...+ ...|+++.+++.+
T Consensus 31 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 106 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANML----LESGYTPVFAGIKND 106 (375)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHH----HHTTCEEEECCBCTT
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHH----HHCCCEEEEeccCCC
Confidence 6788999999999999988899999999999999999 899999999999999876443 3468888888753
Q ss_pred ---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--CcEEEECCc--
Q 009523 275 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT-- 347 (532)
Q Consensus 275 ---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aDivv~S~s-- 347 (532)
|+++|++++++ ++++|++++| +|.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|++
T Consensus 107 ~~~d~~~l~~~i~~-~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~ 182 (375)
T 2fnu_A 107 GNIDELALEKLINE-RTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAI 182 (375)
T ss_dssp SSBCGGGSGGGCCT-TEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCCCHHHHHhhcCc-CceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCC
Confidence 78999999987 7999888766 899999999999999999999999998765322211122 378888888
Q ss_pred cccCCCCCcEEEEEEeC-hHHHHHHHHHhhh--------------cC--CCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV--------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALR 410 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~--------------~G--~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~ 410 (532)
|++++ | +||+++.+ ++++++++..... .+ ..+.+..+.+.+..++.+..++++..+++++
T Consensus 183 K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 259 (375)
T 2fnu_A 183 KPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALT 259 (375)
T ss_dssp SSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99976 4 46666654 6788877664321 11 1355666666555666677777888889999
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH-HHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT-ATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~-~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
+.+.|++.|++. +..|.-.. .+.+.++++.++.... ....+.+.|...++.++.+ +......+...
T Consensus 260 l~~~L~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~-~~p~~~~~~~~ 326 (375)
T 2fnu_A 260 YDRIFKDNPYFT-PLHPLLKD-----------KSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVH-YKPIYQYQLYQ 326 (375)
T ss_dssp HHHHHTTCSSEE-ESGGGCSS-----------CCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCC-CCCGGGSHHHH
T ss_pred HHHHhhcCCCcc-ccCCCCCC-----------CcceEEEEEEeCccccchHHHHHHHHHHCCCCcccc-ccccccchhhh
Confidence 999999877653 22110000 1123456777763111 3456666666567776632 11111101000
Q ss_pred ---cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 490 ---SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 490 ---s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
....++... ...++.|||+++....++.++.+.++|+
T Consensus 327 ~~~~~~~~~~~~----~~~~~~lRi~~~~~~t~~~i~~~~~~l~ 366 (375)
T 2fnu_A 327 QLFNTAPLKSAE----DFYHAEISLPCHANLNLESVQNIAHSVL 366 (375)
T ss_dssp HHHCCCCCHHHH----HHHHHEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cCCCccCChHHH----HHHhCEEEecCCCCCCHHHHHHHHHHHH
Confidence 000011000 0124689999997666555565555554
No 121
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=7.5e-24 Score=224.74 Aligned_cols=297 Identities=13% Similarity=0.062 Sum_probs=195.4
Q ss_pred hhHHHHHHHHHhhh------C--CCcEEEeCCHHHHHHHHHHHhccCCC--------------EEEEc-CCCCcchHHHH
Q 009523 201 PTTVVVEEKMSALE------G--AESTVIMASGMSASTVMLLALVPAGG--------------HIVTT-TDCYRKTRIFI 257 (532)
Q Consensus 201 p~~~~Le~~lA~l~------g--a~~~i~~sSG~~Ai~~al~all~~Gd--------------~VIv~-~~~y~~t~~~~ 257 (532)
....+|++++|+++ + .++++++++|++|+.+++.+++++|| +|+++ .|+|.+.....
T Consensus 83 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~ 162 (444)
T 3if2_A 83 QGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVH 162 (444)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCC
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcc
Confidence 34678888888886 2 35788888889999999999999998 78876 88998754211
Q ss_pred H--HhcccCCcEEEEeC----------CCCHHHHHHh---hcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCE
Q 009523 258 E--TVLPKMGITATVID----------PADMEGLEAA---LNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAI 319 (532)
Q Consensus 258 ~--~~l~~~Gv~v~~vd----------~~dle~Le~a---l~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~ 319 (532)
. ..+...|..+..++ ..|+++|+++ +++ ++++|++++|+||||.++| +++|+++|+++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~ 241 (444)
T 3if2_A 163 VEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIP 241 (444)
T ss_dssp SSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCC
T ss_pred cccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCE
Confidence 0 02455677776665 2489999988 565 7999999999999999999 78899999999999
Q ss_pred EEEECCCCCCCc------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009523 320 VCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 393 (532)
Q Consensus 320 lIvDet~a~~~~------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~ 393 (532)
+|+|++|+.++. ..+...+.++++.|+||+ +++| ...|++++++++++.++......+...++..+.++...
T Consensus 242 li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~ 319 (444)
T 3if2_A 242 LIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPG-MRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPL 319 (444)
T ss_dssp EEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred EEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCC-CceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHH
Confidence 999999875322 111224678999999997 4443 46789999999999888766544444444444433333
Q ss_pred HHHH------HH-HHHHHHHHHHHHHHHHHh-CCCce-EEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHH
Q 009523 394 MKTL------HL-RVQQQNSTALRMAKILEA-HPKVK-RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 464 (532)
Q Consensus 394 l~tl------~~-r~~~~~~~a~~la~~L~~-~p~v~-~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l 464 (532)
++.. .. ..+...++.+.+.+.|.+ .+.+. .+..|. .|.++++.++........+.
T Consensus 320 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~l~ 383 (444)
T 3if2_A 320 VANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPE----------------GAIFLWLWFKDLPISTLDLY 383 (444)
T ss_dssp HHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCC----------------BSSEEEEEETTCSSCHHHHH
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCC----------------ccEEEEEEcCCCCCCHHHHH
Confidence 3321 11 122334556667777765 34432 233232 46788999874112345566
Q ss_pred HHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH---HHHHHHHHHHh
Q 009523 465 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE---DLKADVLQALH 530 (532)
Q Consensus 465 ~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~---dli~dL~~AL~ 530 (532)
+.|...++.++.|..+........ .....+.||||++. +.+ +.++.|.++++
T Consensus 384 ~~l~~~gi~v~~g~~~~~~~~~~~-------------~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~ 438 (444)
T 3if2_A 384 ERLKAKGTLIVPSEYFFPGVDVSD-------------YQHAHECIRMSIAA-DEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp HHHHHTTEECEEGGGSCTTCCCTT-------------CSGGGSEEEEESSS-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEecchhhcCCCCCcc-------------cccCCCeEEEEEeC-CHHHHHHHHHHHHHHHH
Confidence 666666888887765431100000 00024789999998 433 34455555544
No 122
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.92 E-value=9.2e-24 Score=220.83 Aligned_cols=291 Identities=14% Similarity=0.172 Sum_probs=202.8
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHh----
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV---- 260 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~---- 260 (532)
+.+.+++++...++++++++++|.+++++++||++|+..++..+.. +| |+|++.++.|++........
T Consensus 73 ~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~ 152 (406)
T 4adb_A 73 HTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCG
T ss_pred cccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCc
Confidence 4446678899999999999999999999999999999999998765 66 99999999999864322221
Q ss_pred -----cccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-----CHHHHHHHHHhCCCEEEEECCCCCC-
Q 009523 261 -----LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP- 329 (532)
Q Consensus 261 -----l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~-----dl~~I~~la~~~gi~lIvDet~a~~- 329 (532)
+...+..+..++..|+++|++++++ ++++|+++ |+||+|.+. ++++|.++|++||+++|+||++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 230 (406)
T 4adb_A 153 AYSQDFAPLPADIRHAAYNDINSASALIDD-STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVG 230 (406)
T ss_dssp GGTGGGCSCCSSEEEECTTCHHHHHTTCST-TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred cccccCCCCCCCceEeCCCcHHHHHHHhcC-CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 1122346677788899999999986 79999998 999999775 5889999999999999999998632
Q ss_pred -----CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH--HHHHH
Q 009523 330 -----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQ 402 (532)
Q Consensus 330 -----~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl--~~r~~ 402 (532)
+.........|++ |+||.+++ | ..+|++++++++++.++..........++..++.+...++.+ ....+
T Consensus 231 ~~g~~~~~~~~~~~~d~~--t~sK~~~~-G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 306 (406)
T 4adb_A 231 RTGELYAYMHYGVTPDLL--TTAKALGG-G-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLN 306 (406)
T ss_dssp TTSSSSHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHH
T ss_pred ccchhHHHHhcCCCCCEE--EechhhcC-C-CCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 1122334456777 57999994 3 568899999998887765443334456777777766666654 34445
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCccc
Q 009523 403 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCES 481 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~s 481 (532)
+..++++++.+.|++... .++.. ...++.|.+++|++++.. .....+.+.|...++.+..++
T Consensus 307 ~~~~~~~~l~~~l~~~~~----~~~~~----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--- 369 (406)
T 4adb_A 307 GVKQRHDWFVERLNTINH----RYGLF----------SEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG--- 369 (406)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHCCE----------EEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS---
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCc----------eEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC---
Confidence 556677777777765311 00100 011235789999997521 134556666655566554331
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 482 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 482 l~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
++.|||+++.. +.+++++.|.++++
T Consensus 370 ------------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 370 ------------------------GNVVRFAPALNVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp ------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------CCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 47899976654 34455555555554
No 123
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.92 E-value=7.8e-24 Score=219.00 Aligned_cols=280 Identities=12% Similarity=0.085 Sum_probs=193.2
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHH---hc---cCC-CEEEEcCCCCcchHHHHHHhccc----C
Q 009523 197 RYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLA---LV---PAG-GHIVTTTDCYRKTRIFIETVLPK----M 264 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga-~~~i~~sSG~~Ai~~al~a---ll---~~G-d~VIv~~~~y~~t~~~~~~~l~~----~ 264 (532)
+|+++...+|+++|++++|. +++++++||++|+.+++.. +. ++| |+|+++++.|++........... .
T Consensus 66 ~y~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~ 145 (375)
T 2eh6_A 66 LYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHK 145 (375)
T ss_dssp TBCCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTT
T ss_pred ccCCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccC
Confidence 45678889999999999998 7788889999999998865 34 788 99999999998864333222111 1
Q ss_pred CcE-----EEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 265 GIT-----ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 265 Gv~-----v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
|.. +..++..|+++|++++++ ++++|++++|+||||.+.| +++|.++|+++|+++|+|++++....
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (375)
T 2eh6_A 146 GFEPLVPGFSYAKLNDIDSVYKLLDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF 224 (375)
T ss_dssp TTCSCCSSEEEECTTCHHHHHTTCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCceeCCCchHHHHHHHhcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Confidence 222 566677799999999987 7999999999999999988 99999999999999999999874211
Q ss_pred ccccccC--CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 009523 332 QKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 409 (532)
Q Consensus 332 ~~~l~~g--aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~ 409 (532)
......| .|++ |+||+++++ ...|++++++++++.++..........++..+..+...++.+....++..++++
T Consensus 225 ~~~~~~~~~~d~~--s~SK~~~~g--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (375)
T 2eh6_A 225 YAYQHFNLKPDVI--ALAKGLGGG--VPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGN 300 (375)
T ss_dssp SGGGGGTCCCSEE--EECGGGGTT--SCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCEE--EEcccccCC--CCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112335 7887 566999863 356888888887776654211122234666666666667665545556667788
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
++.+.|++.+.. .+ .+.|.++++.++.+ ...+.+.|...++.+..+
T Consensus 301 ~l~~~L~~~~~~-~~------------------~~~g~~~~~~~~~~---~~~~~~~l~~~gi~~~~~------------ 346 (375)
T 2eh6_A 301 YFKEKLKELGKG-KV------------------KGRGLMLGLELERE---CKDYVLKALEKGLLINCT------------ 346 (375)
T ss_dssp HHHHHHHHTTSS-EE------------------EEETTEEEEECSSC---CHHHHHHHHHTTEECEEE------------
T ss_pred HHHHHHHHHhcC-Cc------------------eEEEEEEEEEEcCc---HHHHHHHHHHCCCEEecC------------
Confidence 888888875431 11 12467899998743 223444443335443321
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.++.+||+++....++.++.+.++|+
T Consensus 347 ---------------~~~~iRi~~~~~~~~~~i~~~~~~l~ 372 (375)
T 2eh6_A 347 ---------------AGKVLRFLPPLIIQKEHIDRAISVLR 372 (375)
T ss_dssp ---------------TTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ---------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 14789999886555555555555554
No 124
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=2e-23 Score=221.21 Aligned_cols=288 Identities=13% Similarity=0.119 Sum_probs=193.8
Q ss_pred CCCch-hHHHHHHHHHhhhC----------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcc-cC
Q 009523 197 RYGNP-TTVVVEEKMSALEG----------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KM 264 (532)
Q Consensus 197 R~~~p-~~~~Le~~lA~l~g----------a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~-~~ 264 (532)
+|+.+ ...+|+++|+++++ .++++++++|++|+..++.+++++||+|+++.+.|++... .+. ..
T Consensus 81 ~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~ 156 (435)
T 3piu_A 81 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR----DLKWRT 156 (435)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HTTTTT
T ss_pred ccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH----HHHHhc
Confidence 34443 35789999999887 4578888888899999999999999999999999998653 333 56
Q ss_pred CcEEEEeCCC-------CHHHHHHhhcC-----CCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCC
Q 009523 265 GITATVIDPA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 265 Gv~v~~vd~~-------dle~Le~al~~-----~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~ 329 (532)
|.++..++.+ |+++|++++++ .++++|++++|+||||.+.+. ++|+++|++||+++|+|++|+..
T Consensus 157 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 236 (435)
T 3piu_A 157 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGT 236 (435)
T ss_dssp CCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred CCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccc
Confidence 8888887643 78999998864 269999999999999999875 67888899999999999997642
Q ss_pred Cc-----cccc----c---------cCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHH
Q 009523 330 LN-----QKAL----S---------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLI 390 (532)
Q Consensus 330 ~~-----~~~l----~---------~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~ 390 (532)
.. .... + .+.++++.|+||.+|.+| ...|++++ ++++.+.++......+ .++.....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 313 (435)
T 3piu_A 237 AFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSFGL--VSSQTQHLL 313 (435)
T ss_dssp CCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHHHGGGSC--CCHHHHHHH
T ss_pred ccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHHHhhcCC--CCHHHHHHH
Confidence 11 1111 1 123388999999997554 45788888 5667777766544332 233333332
Q ss_pred HHhHH-------HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----HH
Q 009523 391 IRGMK-------TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LT 458 (532)
Q Consensus 391 l~~l~-------tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-----~~ 458 (532)
...++ .+..+.++..++++++.+.|++. ++. +..+ ..|.++++.++.. ..
T Consensus 314 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~g~~~~~~l~~~~~~~~~~ 375 (435)
T 3piu_A 314 SAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GIS-CLNG----------------NAGLFCWVDMRHLLRSNTFE 375 (435)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCE-ECCC----------------CSSSEEEEECGGGSSSSSHH
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ccCC----------------CeeEEEEEEcccccccCCch
Confidence 22222 12333445556777788888775 342 2111 1356889988642 11
Q ss_pred HHHHHHHHc-CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHHHHHHh
Q 009523 459 ATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE---DFEDLKADVLQALH 530 (532)
Q Consensus 459 ~~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e---d~~dli~dL~~AL~ 530 (532)
....+.+.| +..++.+..|..+. + ..++.+||+++.. +.++.++.|.++++
T Consensus 376 ~~~~~~~~l~~~~gi~v~~g~~~~----~-----------------~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~ 430 (435)
T 3piu_A 376 AEMELWKKIVYEVHLNISPGSSCH----C-----------------TEPGWFRVCFANLPERTLDLAMQRLKAFVG 430 (435)
T ss_dssp HHHHHHHHHHHTSCEECEEGGGGT----C-----------------SSTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCEEEeCCcccC----C-----------------CCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 344555555 33477776664422 1 1257999999873 34555666666654
No 125
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.92 E-value=2.2e-23 Score=215.55 Aligned_cols=168 Identities=14% Similarity=0.115 Sum_probs=136.0
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---
Q 009523 201 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 273 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~-~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--- 273 (532)
+..+++++++++++|.+ +.++ ++||++|+.+++.+++++||+|+++.+.|.+.. +...+...|+++..++.
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR--FVQLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 56788999999999875 4555 467789999999999999999999998777633 22345566877777653
Q ss_pred --CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCcccc
Q 009523 274 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 350 (532)
Q Consensus 274 --~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~sK~l 350 (532)
.|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. .......|+|+++.|+||++
T Consensus 130 ~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l 208 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQ-NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVL 208 (376)
T ss_dssp CCCCHHHHHTTTTS-CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTT
T ss_pred CCCCHHHHHHhhcc-CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccc
Confidence 379999998876 79999999999999999999999999999999999999976543 23333468999999999999
Q ss_pred CCCCCcEEEEEEeChHHHHHHHH
Q 009523 351 GGHNDVLAGSISGSGKLVTQIRN 373 (532)
Q Consensus 351 gg~gd~~gG~lv~~~~li~~l~~ 373 (532)
+++.+ .|+++.++++++.+..
T Consensus 209 ~~~~G--~g~~~~~~~~~~~~~~ 229 (376)
T 3f0h_A 209 ACPPG--ISVIVLAPRGVERVEK 229 (376)
T ss_dssp CCCSS--CEEEEECHHHHHHHHT
T ss_pred cCCCc--eEEEEECHHHHHHhhc
Confidence 94432 5788899988887764
No 126
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.92 E-value=3e-23 Score=216.73 Aligned_cols=290 Identities=13% Similarity=0.129 Sum_probs=202.5
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc-------cCCCEEEEcCCCCcchHHH-------
Q 009523 191 ASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-------PAGGHIVTTTDCYRKTRIF------- 256 (532)
Q Consensus 191 ~~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all-------~~Gd~VIv~~~~y~~t~~~------- 256 (532)
..|.|+++.++..+++++++++++|.+++++++||++|+..+++.+. .+||+||+.++.|++....
T Consensus 68 ~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~ 147 (395)
T 3nx3_A 68 LLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTAN 147 (395)
T ss_dssp CSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCC
T ss_pred ccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCC
Confidence 34667778899999999999999998889999999999999998765 3579999999999875321
Q ss_pred --HHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC-
Q 009523 257 --IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP- 329 (532)
Q Consensus 257 --~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~- 329 (532)
+...+...+.++..++.+|+++|++++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||++...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g 226 (395)
T 3nx3_A 148 EKYQKPFKPLISGVKFAKYNDISSVEKLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMG 226 (395)
T ss_dssp HHHHGGGCSCCSCEEEECTTCHHHHHTTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cccccccCCCCCCcEEeCCCCHHHHHHhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCC
Confidence 11223344567778888899999999986 7999999999999999987 999999999999999999997632
Q ss_pred -----CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHH-HHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHH
Q 009523 330 -----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRV 401 (532)
Q Consensus 330 -----~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~ 401 (532)
..........|++ |++|.+++ | ...|++++++++ ++.++..........++..+..+...++.+. ...
T Consensus 227 ~~g~~~~~~~~~~~~d~~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~ 302 (395)
T 3nx3_A 227 RSGKFFAYEHAQILPDIM--TSAKALGC-G-LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKIL 302 (395)
T ss_dssp TTSSSSGGGGGTCCCSEE--EECGGGTT-T-SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHH
T ss_pred cCCcchhHHhcCCCCCEE--EecccccC-C-CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHH
Confidence 1122333445666 47799986 3 467899999988 7776543322233456777776666666442 223
Q ss_pred HHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009523 402 QQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G 477 (532)
++..++.+++.+.|++ +|.+..+ ++.|.+++|++++. .....+.+.|...++.++.|
T Consensus 303 ~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~ 363 (395)
T 3nx3_A 303 ENVNKLTPYLEQSLDELINEFDFCKKR------------------KGLGFMQGLSLDKS-VKVAKVIQKCQENALLLISC 363 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEECTT-SCHHHHHHHHHHTTEECEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EeEEEEEEEEeCCc-chHHHHHHHHHHCCCEEecC
Confidence 4444555555555543 3433221 23578999999753 23456666665556554432
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 531 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~~ 531 (532)
.++.|||+++.. +.+++++.|++++++
T Consensus 364 ---------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 364 ---------------------------GENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp ---------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 147899987664 345555566665543
No 127
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.92 E-value=1.2e-22 Score=207.90 Aligned_cols=277 Identities=17% Similarity=0.164 Sum_probs=187.9
Q ss_pred CchhHHHHHHHHHhhhCCCc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC--CcEEEEeCCC-
Q 009523 199 GNPTTVVVEEKMSALEGAES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPA- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~-~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~--Gv~v~~vd~~- 274 (532)
..+..+++++++++++|.+. .+++++|++|+.+++.+++++||+|+++.+.|.++... ..+... |.++..++.+
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 118 (356)
T 1v72_A 41 TDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPA 118 (356)
T ss_dssp CSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGG
T ss_pred cchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCC
Confidence 46788999999999999655 57889999999999999999999999999988765422 013334 7888888754
Q ss_pred ---CHHHHHH-hhcCC------CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCC------Cccccc
Q 009523 275 ---DMEGLEA-ALNNN------NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 335 (532)
Q Consensus 275 ---dle~Le~-al~~~------~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~------~~~~~l 335 (532)
|+++|++ ++++. ++++|++++|+| ||.+.+ +++|.++|++||+++|+|+++..+ ......
T Consensus 119 ~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 197 (356)
T 1v72_A 119 AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM 197 (356)
T ss_dssp GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT
T ss_pred CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh
Confidence 7999999 88752 589999999987 999554 788999999999999999997531 111111
Q ss_pred --ccCCcEEEECCccccCCCCCcEE-EEEEeChHHHHHHHHHhhhcCCCcc--HHHHHHHHHhHHH--HHHHHHHHHHHH
Q 009523 336 --SLGADLVLHSATKFIGGHNDVLA-GSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKT--LHLRVQQQNSTA 408 (532)
Q Consensus 336 --~~gaDivv~S~sK~lgg~gd~~g-G~lv~~~~li~~l~~~~~~~G~~~~--~~~a~l~l~~l~t--l~~r~~~~~~~a 408 (532)
..++|+++.|+||+ +++ .| |++++++++++.++......|.... ...+..+.+.++. +....++..+++
T Consensus 198 ~~~~~~d~~~~s~sK~-g~~---~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 273 (356)
T 1v72_A 198 TWKAGVDALSFGATKN-GVL---AAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAA 273 (356)
T ss_dssp TGGGTCCEEEECCGGG-TCS---SCEEEEESSGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC-CCc---CccEEEEECHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 23689999999999 432 34 7888898888887665443332222 2222212222221 223345566778
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCcc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 488 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~ 488 (532)
+++.+.|++.+++..+ .|. .++++++.++. .+.+.|...++.+..|..
T Consensus 274 ~~l~~~L~~~~g~~~~-~~~----------------~~~~~~~~~~~------~~~~~l~~~gi~v~~g~~--------- 321 (356)
T 1v72_A 274 QRLAQGLEGLGGVEVL-GGT----------------EANILFCRLDS------AMIDALLKAGFGFYHDRW--------- 321 (356)
T ss_dssp HHHHHHHTTCTTEEEE-SCC----------------CSSEEEEEECH------HHHHHHHHTTCBCBCSSS---------
T ss_pred HHHHHHHhhCCCcEEc-cCC----------------CccEEEEEcCH------HHHHHHHhcCeEEecccc---------
Confidence 8888888877766432 332 35678888852 344444434555554420
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 489 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 489 ~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
+ ++.+||+++...+++.++.+.++|+
T Consensus 322 --------------~--~~~iRi~~~~~~~~~~i~~~~~~l~ 347 (356)
T 1v72_A 322 --------------G--PNVVRFVTSFATTAEDVDHLLNQVR 347 (356)
T ss_dssp --------------S--TTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred --------------C--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence 1 4689999987655444455544443
No 128
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.92 E-value=3.6e-23 Score=217.13 Aligned_cols=294 Identities=12% Similarity=0.078 Sum_probs=192.1
Q ss_pred hhHHHHHHHHHhhh------CC--CcEEEeCCHHHHHHHHHHHhccCCC-----EEEEc-CCCCcchHHHHHH--hcccC
Q 009523 201 PTTVVVEEKMSALE------GA--ESTVIMASGMSASTVMLLALVPAGG-----HIVTT-TDCYRKTRIFIET--VLPKM 264 (532)
Q Consensus 201 p~~~~Le~~lA~l~------ga--~~~i~~sSG~~Ai~~al~all~~Gd-----~VIv~-~~~y~~t~~~~~~--~l~~~ 264 (532)
....+|++++|+++ +. ++++++++|++|+.+++.+++++|| +|+++ .|+|++....... .....
T Consensus 75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~ 154 (417)
T 3g7q_A 75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA 154 (417)
T ss_dssp TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence 45678899999886 22 5788888888999999999999988 99997 9999875433211 12334
Q ss_pred CcEEEEeCC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 265 GITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 265 Gv~v~~vd~------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
+..+..++. .|+++|+ +++ ++++|++++|+||||.+++ +++|+++|++||+++|+|++|+.++.
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~ 231 (417)
T 3g7q_A 155 RPNIELLPEGQFKYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIF 231 (417)
T ss_dssp CCEEEEEGGGEEEEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBC
T ss_pred cCcccccCCcccccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccc
Confidence 555655543 2788887 555 6999999999999999999 88899999999999999999875321
Q ss_pred --ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHH-HHH
Q 009523 332 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHL-RVQ 402 (532)
Q Consensus 332 --~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t------l~~-r~~ 402 (532)
..+...+.++++.|+||+ +++| ...|++++++++++.++......+...++..+.++...++. +.. ..+
T Consensus 232 ~~~~~~~~~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 309 (417)
T 3g7q_A 232 SEARPLWNPNIILCMSLSKL-GLPG-SRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKP 309 (417)
T ss_dssp SCCCCCCCTTEEEEEESGGG-TCTT-SCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHH
T ss_pred cccccCCCCCEEEEEechhc-cCCC-cceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHH
Confidence 112234678999999995 5554 46789999999999988776655554555555444444432 111 122
Q ss_pred HHHHHHHHHHHHHHh-CCCc-eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009523 403 QQNSTALRMAKILEA-HPKV-KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 480 (532)
Q Consensus 403 ~~~~~a~~la~~L~~-~p~v-~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~ 480 (532)
...++.+.+.+.|++ .+.+ ..+..|. .|.++++.++........+.+.|...++.+..|..+
T Consensus 310 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f 373 (417)
T 3g7q_A 310 FYYQRVQQTIAIIRRYLSEERCLIHKPE----------------GAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYF 373 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCTTTCEEECCC----------------BSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCCceeeCCC----------------cceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhh
Confidence 334566677777766 3432 1233332 467889998741123445566665568888877654
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009523 481 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 530 (532)
Q Consensus 481 sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~---~dli~dL~~AL~ 530 (532)
....... .+..++.||||++. +. ++.++.|.++++
T Consensus 374 ~~~~~~~--------------~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 374 FPGLDKP--------------WPHTHQCMRMNYVP-EPDKIEAGVKILAEEIE 411 (417)
T ss_dssp CTTBSSC--------------CGGGGGEEEEESCS-CHHHHHHHHHHHHHHHH
T ss_pred CCCCccc--------------cccCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 3110000 00114799999997 43 344555555554
No 129
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=3e-23 Score=219.10 Aligned_cols=307 Identities=16% Similarity=0.166 Sum_probs=188.4
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcc-------------hHHH
Q 009523 200 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRK-------------TRIF 256 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all--------~~Gd~VIv~~~~y~~-------------t~~~ 256 (532)
.+..+++++++++++|.+ +++++++|++|+.+++.+++ ++||+|++..|.|++ +...
T Consensus 60 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~ 139 (432)
T 3a9z_A 60 KDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLP 139 (432)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHH
Confidence 345689999999999974 57777777899999998886 589877777766654 3333
Q ss_pred HHHhcccCCcEEEEeCC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC----------CEE
Q 009523 257 IETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----------AIV 320 (532)
Q Consensus 257 ~~~~l~~~Gv~v~~vd~------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g----------i~l 320 (532)
+....+..|.++..++. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++| +++
T Consensus 140 ~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~l 218 (432)
T 3a9z_A 140 LEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLV 218 (432)
T ss_dssp HHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred HHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEE
Confidence 33444556888888874 378999999987 7999999999999999999999999999999 999
Q ss_pred EEECCCCCCCc-ccccccCCcEEEECCccccCCCCCcEEEEEEeChHH-HHHHHHH-------hhhcCCCccHHHHHHHH
Q 009523 321 CIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNL-------HHVLGGALNPNAAYLII 391 (532)
Q Consensus 321 IvDet~a~~~~-~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~-------~~~~G~~~~~~~a~l~l 391 (532)
|+|++|+.+.. .+....++|+++.|+||++| + . +|+++++++. ...++.. .....++.++...+.+.
T Consensus 219 ivDea~~~~~~~~~~~~~~~d~~~~s~~K~~g-~--~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 294 (432)
T 3a9z_A 219 HTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-P--R-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLG 294 (432)
T ss_dssp EEECTTTTTTSCCCHHHHCCSEEEEEGGGTTC-C--S-CEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHH
T ss_pred EEEchhhhCCcccChhhcCCCEEEEehhHhcC-C--c-ceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHH
Confidence 99999876532 23334578999999999886 3 2 6888887754 2222211 11112334554444443
Q ss_pred HhHHHH----HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc
Q 009523 392 RGMKTL----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL 467 (532)
Q Consensus 392 ~~l~tl----~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L 467 (532)
.+++.+ ....++..++++++.+.|++.+++. +.+++.. ++ ....+++++|.+++.......+++.+
T Consensus 295 aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l 364 (432)
T 3a9z_A 295 KAADLVSENCETYEAHMRDIRDYLEERLEAEFGKR-IHLNSRF--PG-------VERLPNTCNFSIQGSQLRGYMVLAQC 364 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-EEESSCC--TT-------CCBCTTEEEEEECSTTCCHHHHHHHC
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccCCc-EEEeCCC--Cc-------ccCCCCEEEEEeCCCCCcHHHHHHHh
Confidence 444433 3334445566777777777654332 2211110 00 01246688999875111234566666
Q ss_pred CCCceeecCCCcccccccCccccccCCCHHHHHhcCCC----CCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 468 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM----DNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 468 ~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~----~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
. ++.+..|..++.. +...+.......|+. ++.||||++.. +.+.+++.|+++++
T Consensus 365 ~--~i~~~~G~~~~~~-------~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 365 Q--TLLASVGASCHSD-------HEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp S--SEECBSSCGGGGG-------GTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred c--CeEEeccccccCC-------CCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 4 6677776543211 000111233345553 48999999964 34555555555554
No 130
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.91 E-value=1.1e-22 Score=214.32 Aligned_cols=211 Identities=14% Similarity=0.156 Sum_probs=164.1
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-----
Q 009523 201 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~----- 274 (532)
+..+++++.+++++|.++.++++||++|+..++.++ +++||+|+++.++|.++... +...|.+++.++.+
T Consensus 42 ~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~ 117 (418)
T 2c81_A 42 SMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATA----VLNVNALPVFVDVEADTYC 117 (418)
T ss_dssp CHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTCS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHH----HHHcCCEEEEEecCCCCCC
Confidence 348899999999999988999999999999999999 89999999999999987643 34568888887643
Q ss_pred -CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc--cccccCCcEEEECC--ccc
Q 009523 275 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSA--TKF 349 (532)
Q Consensus 275 -dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~--~~l~~gaDivv~S~--sK~ 349 (532)
|+++|++++++ ++++|++ +||+|.+.|+++|.++|+++|+++|+|++++.+... .+...-.|+++.|+ ||+
T Consensus 118 ~d~~~l~~~i~~-~~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~ 193 (418)
T 2c81_A 118 IDPQLIKSAITD-KTKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKV 193 (418)
T ss_dssp BCHHHHGGGCCT-TEEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCC-CCeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcc
Confidence 79999999987 7999986 468999999999999999999999999998876422 22222247888887 999
Q ss_pred cCCCCCcEEEEEEeC-hHHHHHHHHHhhh--------------cC------------CCccHHHHHHHHHhHHHHHHHHH
Q 009523 350 IGGHNDVLAGSISGS-GKLVTQIRNLHHV--------------LG------------GALNPNAAYLIIRGMKTLHLRVQ 402 (532)
Q Consensus 350 lgg~gd~~gG~lv~~-~~li~~l~~~~~~--------------~G------------~~~~~~~a~l~l~~l~tl~~r~~ 402 (532)
+++ | .+|+++++ +++++.++..... +. ..+.+..+.+....++.+..+.+
T Consensus 194 ~~~-g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~ 270 (418)
T 2c81_A 194 LTA-G--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNA 270 (418)
T ss_dssp SCS-S--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHH
T ss_pred cCC-C--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 998 5 47898884 6787777653321 10 01344555555555666667777
Q ss_pred HHHHHHHHHHHHHHhCCCce
Q 009523 403 QQNSTALRMAKILEAHPKVK 422 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~p~v~ 422 (532)
+..++++++.+.|.+.|++.
T Consensus 271 ~~~~~~~~l~~~L~~~~g~~ 290 (418)
T 2c81_A 271 IREKNAMFLNDALSKIDGIK 290 (418)
T ss_dssp HHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHHHHHHHHHhccCCCcc
Confidence 77788889999998877654
No 131
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.91 E-value=5.3e-23 Score=216.11 Aligned_cols=274 Identities=12% Similarity=0.078 Sum_probs=181.0
Q ss_pred HHHHHHHHHhhh----CCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC--
Q 009523 203 TVVVEEKMSALE----GAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-- 273 (532)
...+++++++++ +.+ +++++++|++|+..++.+++++||+|+++.|.|.+... .++..|.++..++.
T Consensus 81 ~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~ 156 (413)
T 3t18_A 81 EKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRK----ICEEFGRNFKTFEFFT 156 (413)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHH----HHHHHTCEEEEECCBC
T ss_pred CHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHH----HHHHhCCeEEEeeccC
Confidence 445666666543 444 67777778899999999999999999999999987653 34456888888764
Q ss_pred ----CCHHHHHHhhcCC---Cee-EEEEeCC-CCCCCcccCHHHHH---HHHH------hCCCEEEEECCCCCCCcc---
Q 009523 274 ----ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKLVS---DLCH------KKGAIVCIDGTFATPLNQ--- 332 (532)
Q Consensus 274 ----~dle~Le~al~~~---~tk-lV~lesP-~NptG~v~dl~~I~---~la~------~~gi~lIvDet~a~~~~~--- 332 (532)
.|+++|++++++. +++ +|++++| +||||.+.+.+++. ++|+ ++|+++|+||+|......
T Consensus 157 ~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~ 236 (413)
T 3t18_A 157 DDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQ 236 (413)
T ss_dssp TTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSST
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhh
Confidence 2789999988641 356 8999999 99999999976555 5555 899999999997532110
Q ss_pred -cc-c----ccCCc---EEEECCccccCCCCCcEEEEEEe---ChHHHHHHHHHhhhc----CCCccHHHHHHHHHhHHH
Q 009523 333 -KA-L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVL----GGALNPNAAYLIIRGMKT 396 (532)
Q Consensus 333 -~~-l----~~gaD---ivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~~~~----G~~~~~~~a~l~l~~l~t 396 (532)
.+ . ..+.+ +++.|+||.++.+| ...|++++ ++++++.++...... ....+...+..+...++.
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 315 (413)
T 3t18_A 237 QRKFFEKFSNLPRNLFVVVAFSMSKSHTAYG-LRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERA 315 (413)
T ss_dssp TTGGGGGGTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSH
T ss_pred HHHHHHHHhhcCCCeeEEEEEecCccCCCcC-cCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcC
Confidence 11 1 11223 78899999999665 45788888 889988887654321 123455554444433322
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc
Q 009523 397 ---------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL 467 (532)
Q Consensus 397 ---------l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L 467 (532)
+....++..++.+.+.+.|++. ++. +..|. .|.++++.+. + ...|.+.|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~----------------~~~~~~~~~~-~---~~~~~~~l 373 (413)
T 3t18_A 316 ENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLT-MIPYF----------------GGFFTFIPTD-K---AFDIVKDL 373 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-CBCCC----------------SSSCEEEECS-C---HHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-ccCCC----------------ceEEEEeCCC-C---HHHHHHHH
Confidence 2223344556677777888775 332 11111 2335666553 2 23344444
Q ss_pred CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 468 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 468 ~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
...++.+..| ++.+|||++..+.+++++.|.++|++
T Consensus 374 ~~~gv~v~~g----------------------------~~~iRis~~~~~~~~~l~~l~~~l~~ 409 (413)
T 3t18_A 374 EKENIFTIPS----------------------------AKGIRVAICGVGEEKIPKLVQRLAFY 409 (413)
T ss_dssp HHTTEECEEC----------------------------SSEEEECTTTSCGGGHHHHHHHHHHH
T ss_pred HhCCEEEecC----------------------------CCceEEEEeeCCHHHHHHHHHHHHHH
Confidence 4446655543 36899999976666668889888864
No 132
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.91 E-value=1.4e-22 Score=219.53 Aligned_cols=287 Identities=13% Similarity=0.055 Sum_probs=191.5
Q ss_pred hHHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC
Q 009523 202 TTVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 272 (532)
Q Consensus 202 ~~~~Le~~lA~l~----g----a~~~i~~sSG~~Ai~~al~all-~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd 272 (532)
....|++++++++ | .++++++++|++|+..++.+++ ++||+|+++.|.|.+... .+...|.++..++
T Consensus 135 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~ 210 (500)
T 3tcm_A 135 GIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSA----SIALHGGALVPYY 210 (500)
T ss_dssp CCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHH----HHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHH----HHHHcCCEEEEEe
Confidence 3556777777765 2 2567888888899999999998 899999999999987554 3445677777765
Q ss_pred -------CCCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----
Q 009523 273 -------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 332 (532)
Q Consensus 273 -------~~dle~Le~al~~~-----~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~----- 332 (532)
..|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 211 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~ 290 (500)
T 3tcm_A 211 LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKF 290 (500)
T ss_dssp CBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCC
T ss_pred cccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCC
Confidence 34899999998752 5899999999999999987 556777799999999999998764321
Q ss_pred ccc-----cc------CCcEEEECCcccc-CCCCCcEEEEEEe---ChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---
Q 009523 333 KAL-----SL------GADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--- 394 (532)
Q Consensus 333 ~~l-----~~------gaDivv~S~sK~l-gg~gd~~gG~lv~---~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l--- 394 (532)
.++ .. ...++++|+||.+ |..| .++|++++ ++++++.+...... ..+.+....+++...+
T Consensus 291 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~ 368 (500)
T 3tcm_A 291 HSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQILASLVMNPP 368 (500)
T ss_dssp CCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHHHHHHHHSCC
T ss_pred CcHHHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHhcCc
Confidence 110 11 1137788999999 4333 56888887 88898888776542 3334444443333222
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH----
Q 009523 395 -----------KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA---- 459 (532)
Q Consensus 395 -----------~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~---- 459 (532)
+.+....++..++++.+.+.|++.|++. +..|. .|.++++.+.-....
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~----------------g~~~~~~~~~lp~~~~~~~ 431 (500)
T 3tcm_A 369 KASDESYASYKAEKDGILASLARRAKALEHAFNKLEGIT-CNEAE----------------GAMYVFPQICLPQKAIEAA 431 (500)
T ss_dssp CSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCC----------------BTTEECCEECCCHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EecCC----------------eEEEEeeeecCchhhHHHH
Confidence 3344455666788888999998877653 22221 233455444321110
Q ss_pred -------HHH-HHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHH
Q 009523 460 -------TIK-FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQAL 529 (532)
Q Consensus 460 -------~~~-~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL 529 (532)
... +.+.|+..++.+..|..+.. + ...+++|+|++. ++.++.++.|.+++
T Consensus 432 ~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~---~-----------------~g~~~iRis~~~~~e~i~~~i~~l~~~~ 491 (500)
T 3tcm_A 432 KAANKAPDAFYALRLLESTGIVVVPGSGFGQ---V-----------------PGTWHFRCTILPQEDKIPAVISRFTVFH 491 (500)
T ss_dssp HHHTSCHHHHHHHHHHHHHCEECEESTTTCC---C-----------------TTCCBEEEESCSCTTTHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHCCEEEEeCcccCC---C-----------------CCCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 111 22344445777777755421 0 125689999994 45677788887776
Q ss_pred hh
Q 009523 530 HA 531 (532)
Q Consensus 530 ~~ 531 (532)
++
T Consensus 492 ~~ 493 (500)
T 3tcm_A 492 EA 493 (500)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 133
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.91 E-value=5.2e-23 Score=217.46 Aligned_cols=292 Identities=12% Similarity=0.074 Sum_probs=192.5
Q ss_pred CCCchh-HHHHHHHHHhhhCCC--cEEEeCCHHHHH--HHHHHHhccC------------CCEEEEcCCCCcchHHHHHH
Q 009523 197 RYGNPT-TVVVEEKMSALEGAE--STVIMASGMSAS--TVMLLALVPA------------GGHIVTTTDCYRKTRIFIET 259 (532)
Q Consensus 197 R~~~p~-~~~Le~~lA~l~ga~--~~i~~sSG~~Ai--~~al~all~~------------Gd~VIv~~~~y~~t~~~~~~ 259 (532)
+|+.+. ..+|++++|++++.+ +.++++++++++ .+++..+.++ ||+|+++.|+|.+....
T Consensus 71 ~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~--- 147 (422)
T 3d6k_A 71 NYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTI--- 147 (422)
T ss_dssp SSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHH---
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHH---
Confidence 455544 788999999999873 455555556786 5666777666 34899999999886543
Q ss_pred hcccCCcEEEEeCC----CCHHHHHHhhcCCCeeEEE-EeCCCCCCCcccCHH---HHHHHHH-hCCCEEEEECCCCC-C
Q 009523 260 VLPKMGITATVIDP----ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFAT-P 329 (532)
Q Consensus 260 ~l~~~Gv~v~~vd~----~dle~Le~al~~~~tklV~-lesP~NptG~v~dl~---~I~~la~-~~gi~lIvDet~a~-~ 329 (532)
++..|.++..++. .|+++|++++++.++++|+ +++|+||||.+++.+ +|+++|+ ++|+++|+|++|.. .
T Consensus 148 -~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 148 -TEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp -HHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred -HHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 3445777777654 3799999999754689998 689999999999976 7777788 89999999999863 1
Q ss_pred Cc-----cccc--------ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH
Q 009523 330 LN-----QKAL--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT 396 (532)
Q Consensus 330 ~~-----~~~l--------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t 396 (532)
+. ..++ ..+.++++.|+||+ +++| ...|++++++++++.+.......+...++..+..+...++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-lriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAG-SGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcc-cceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence 11 1111 23568999999998 4444 45899999999999888776665555666665555544432
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHhC-CCc--eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH
Q 009523 397 -------LHLRVQQQNSTALRMAKILEAH-PKV--KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA 466 (532)
Q Consensus 397 -------l~~r~~~~~~~a~~la~~L~~~-p~v--~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~ 466 (532)
+....+...++.+.+.+.|.+. +.. ..+..|. .|.++++.+++. ....+.+.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~----------------~g~~~~~~~~~~--~~~~~~~~ 366 (422)
T 3d6k_A 305 VAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPT----------------GGYFISVDVVPG--TASRVVEL 366 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCS----------------BSSCEEEEESTT--CHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCC----------------cceEEEEECCCC--CHHHHHHH
Confidence 2222233334556666666542 211 1222332 466889999753 23345555
Q ss_pred cCCCceeecCCCc-ccccccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHh
Q 009523 467 LKIPYIAPSFGGC-ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALH 530 (532)
Q Consensus 467 L~~~~i~vs~G~~-~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~---ed~~dli~dL~~AL~ 530 (532)
+...++.+..|+. +... + .-.+++||||++. ++.++.++.|.++++
T Consensus 367 l~~~gV~v~~~g~~f~~~--~----------------~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 367 AKEAGIALTGAGSSFPLH--N----------------DPNNENIRLAPSLPPVAELEVAMDGFATCVL 416 (422)
T ss_dssp HHHTTEECCCTTTTSGGG--C----------------CTTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEEcCccccCCC--C----------------CCCCCeEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 5556888877432 2100 0 0125789999995 334555666666554
No 134
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.91 E-value=9e-23 Score=213.97 Aligned_cols=252 Identities=17% Similarity=0.172 Sum_probs=173.9
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc------cCCCE-EEEcCCCCcchHHHHHHhcccC--CcEE
Q 009523 200 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGH-IVTTTDCYRKTRIFIETVLPKM--GITA 268 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all------~~Gd~-VIv~~~~y~~t~~~~~~~l~~~--Gv~v 268 (532)
.+..+++++++++++|.+ +++++++|++++..++.+++ ++||+ |+++.+.|+++...+....+.. |.++
T Consensus 70 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~ 149 (416)
T 1qz9_A 70 RDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL 149 (416)
T ss_dssp GGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceE
Confidence 367789999999999974 67777788899988888776 89997 5555667776654443333333 8899
Q ss_pred EEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccccCCcEEEECCc
Q 009523 269 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 347 (532)
Q Consensus 269 ~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~~gaDivv~S~s 347 (532)
..++. +++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|+|
T Consensus 150 ~~v~~--~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~ 226 (416)
T 1qz9_A 150 RLVDS--PEELPQAIDQ-DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTY 226 (416)
T ss_dssp EEESS--GGGHHHHCST-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSS
T ss_pred EEeCc--HHHHHHHhCC-CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCc
Confidence 88887 8999999987 799999999999999999999999999999999999999875422 2222457899999999
Q ss_pred cccCCCCCcEE-EEEEeChHHHHHHHHHh-----------------------hhcCCCccHHHHHHHHHhHHHH-----H
Q 009523 348 KFIGGHNDVLA-GSISGSGKLVTQIRNLH-----------------------HVLGGALNPNAAYLIIRGMKTL-----H 398 (532)
Q Consensus 348 K~lgg~gd~~g-G~lv~~~~li~~l~~~~-----------------------~~~G~~~~~~~a~l~l~~l~tl-----~ 398 (532)
|+++++. .+ |++++++++++.++... ....++.++.....+...++.+ .
T Consensus 227 K~l~~g~--~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 304 (416)
T 1qz9_A 227 KYLNGGP--GSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMA 304 (416)
T ss_dssp STTCCCT--TCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHH
T ss_pred ccCCCCC--CCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 9975332 24 88888887766554311 1112234444444333344432 3
Q ss_pred HHHHHHHHHHHHHHHHHHhC-C--CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009523 399 LRVQQQNSTALRMAKILEAH-P--KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 473 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~-p--~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~ 473 (532)
...++..++++++.+.|++. | ++. +..|.- + ...+++++|.+++ ...+.+.|...++.
T Consensus 305 ~~~~~~~~~~~~l~~~L~~~~~~~g~~-~~~~~~---~---------~~~~~~~~~~~~~----~~~l~~~l~~~gi~ 365 (416)
T 1qz9_A 305 SLRRKSLALTDLFIELVEQRCAAHELT-LVTPRE---H---------AKRGSHVSFEHPE----GYAVIQALIDRGVI 365 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCE-ECSCSS---G---------GGBCSEEEEECTT----HHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeE-EeCCCC---H---------HHcCCEEEEecCC----HHHHHHHHHhCCcE
Confidence 44566667788888888774 5 443 322210 0 0135689998863 34555565544544
No 135
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.91 E-value=1.1e-22 Score=207.88 Aligned_cols=265 Identities=13% Similarity=0.141 Sum_probs=187.3
Q ss_pred CCCchhHHHHHHHHHhhhC---C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 197 RYGNPTTVVVEEKMSALEG---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g---a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+|+++...++++++|++++ . ++.+++++|++++..++.++ ||+|+++ |+|++... .++..|.++..+
T Consensus 52 ~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~----~~~~~g~~~~~v 123 (335)
T 1uu1_A 52 IYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRI----FAKAVGAKFLEV 123 (335)
T ss_dssp SCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHH----HHHHHTCEEEEC
T ss_pred cCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHH----HHHHcCCeEEEe
Confidence 3455557899999999998 4 46777777789999999887 8999999 99988653 344568888877
Q ss_pred CCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc---ccc-cccCCcEE
Q 009523 272 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKA-LSLGADLV 342 (532)
Q Consensus 272 d~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~---~~~-l~~gaDiv 342 (532)
+.+ |+++| + ++++|++++|+||||.+.|.+++.++++..| ++|+|++|..... ... ...+.+++
T Consensus 124 ~~~~~~~~d~~~l-----~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~ 196 (335)
T 1uu1_A 124 PLTKDLRIPEVNV-----G-EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAV 196 (335)
T ss_dssp CCCTTSCCCCCCC-----C-TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEE
T ss_pred ccCCCCCCCHHHc-----C-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEE
Confidence 643 34444 3 6899999999999999999999999999889 9999999763211 111 12457899
Q ss_pred EECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCC
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p 419 (532)
+.|+||++|.+| ...|++++++++++.++.....+ +.++..++.+...++. +..+.++..++++++.+.|+++
T Consensus 197 ~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 272 (335)
T 1uu1_A 197 IRTFSKAFSLAA-QRVGYVVASEKFIDAYNRVRLPF--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM- 272 (335)
T ss_dssp EEESTTTTTCGG-GCCEEEEECHHHHHHHHHHSCTT--CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EecchhhcCCcc-cCeEEEEeCHHHHHHHHHhcCCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 999999998554 45799999999998887765433 4566655555555543 4445566667788888888775
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHH
Q 009523 420 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 499 (532)
Q Consensus 420 ~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~ 499 (532)
++. + +|. .|+++++.+++ .....+.+.|...++.+..
T Consensus 273 g~~-~-~~~----------------~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~----------------------- 309 (335)
T 1uu1_A 273 GYR-I-TDS----------------RGNFVFVFMEK--EEKERLLEHLRTKNVAVRS----------------------- 309 (335)
T ss_dssp TCC-B-CCC----------------CSSEEEEECCT--HHHHHHHHHHHHHTEEEEE-----------------------
T ss_pred CcE-E-cCC----------------CCeEEEEECCC--CCHHHHHHHHHHCCEEEEE-----------------------
Confidence 332 2 221 35688898864 3445566665544554432
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 500 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 500 ~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
.++.+|||++.+ + .++.+.++|++
T Consensus 310 -----~~~~iRis~~~~--~-~i~~~~~~l~~ 333 (335)
T 1uu1_A 310 -----FREGVRITIGKR--E-ENDMILRELEV 333 (335)
T ss_dssp -----ETTEEEEECCCH--H-HHHHHHHHHHC
T ss_pred -----CCCeEEEEeCCH--H-HHHHHHHHHHh
Confidence 146899999852 3 35666666654
No 136
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.91 E-value=3.6e-23 Score=221.43 Aligned_cols=284 Identities=11% Similarity=0.088 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCE---EEEcCCCCcchHHHHHHhcccCCcEE-----EE
Q 009523 201 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGH---IVTTTDCYRKTRIFIETVLPKMGITA-----TV 270 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~---VIv~~~~y~~t~~~~~~~l~~~Gv~v-----~~ 270 (532)
+..+++++++++++|++ ++++++++++++.+++.+++++||. |+++.++|++....+...++..|+++ ..
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 45678999999999974 5777777789999999999877655 99999999987765655566667653 23
Q ss_pred eCC-----CCHHHHHHhhc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcE
Q 009523 271 IDP-----ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADL 341 (532)
Q Consensus 271 vd~-----~dle~Le~al~---~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDi 341 (532)
.+. .|+++|+++++ + ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. ..+..++++|+
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~-~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~ 269 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGD-SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDF 269 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGG-GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCE
T ss_pred ecCCCCCccCHHHHHHHHHhcCC-CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCE
Confidence 322 27999999996 4 69999999999999999999999999999999999999987653 23444578999
Q ss_pred EEECCccccC-CCCCcEEEEEEeChHHHHHHHHHh-------------------------hhcCCCccHHHHHHHHHhHH
Q 009523 342 VLHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLH-------------------------HVLGGALNPNAAYLIIRGMK 395 (532)
Q Consensus 342 vv~S~sK~lg-g~gd~~gG~lv~~~~li~~l~~~~-------------------------~~~G~~~~~~~a~l~l~~l~ 395 (532)
++.|++|+++ |++ ..|+++.++++++.+.... ....++.+......+..+++
T Consensus 270 ~~~s~~K~l~~gp~--~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~ 347 (465)
T 3e9k_A 270 ACWCSYKYLNAGAG--GIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLE 347 (465)
T ss_dssp EEECSSSTTCCCTT--CCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred EEECcccccccCCC--ceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHH
Confidence 9999999994 443 2366777777765443110 00012344444444444444
Q ss_pred HH-----HHHHHHHHHHHHHHHHHHHhC----------CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009523 396 TL-----HLRVQQQNSTALRMAKILEAH----------PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 460 (532)
Q Consensus 396 tl-----~~r~~~~~~~a~~la~~L~~~----------p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~ 460 (532)
.+ ....++..++++++.+.|+++ +++. +..|. .+ .+.|++++|.++.+ .
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~-~~~p~---~~---------~~~g~~~~~~~~~~---~ 411 (465)
T 3e9k_A 348 IFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVN-IITPS---HV---------EERGCQLTITFSVP---N 411 (465)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEE-ECSCS---SG---------GGBCSCEEEEECCT---T
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeE-EeCCC---CH---------hhcccEEEEEecCC---H
Confidence 32 333445556677777777764 3332 22221 01 12478999998732 2
Q ss_pred HHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCCCH----HHHHHHHHHHHh
Q 009523 461 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVEDF----EDLKADVLQALH 530 (532)
Q Consensus 461 ~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSv-G~ed~----~dli~dL~~AL~ 530 (532)
..+.+.|...++.+.++ .++.||||+ +..+. +++++.|+++++
T Consensus 412 ~~l~~~L~~~Gi~v~~~---------------------------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~ 459 (465)
T 3e9k_A 412 KDVFQELEKRGVVCDKR---------------------------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILD 459 (465)
T ss_dssp CCHHHHHHTTTEECEEE---------------------------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCEEEecC---------------------------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHH
Confidence 23444444445554311 247899998 55544 444555555543
No 137
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.91 E-value=3.2e-22 Score=208.80 Aligned_cols=302 Identities=15% Similarity=0.133 Sum_probs=206.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-------ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-------l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
..+...++|+++|+++|.+++++++||++|+..++.++ +++||+|+++.++|+++...+ ...|.+++++
T Consensus 32 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~~~~ 107 (390)
T 3b8x_A 32 MGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPL----QQYGLRVKFV 107 (390)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 47889999999999999999999999999999999998 789999999999999876543 3468888887
Q ss_pred CCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCC--cEEE
Q 009523 272 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVL 343 (532)
Q Consensus 272 d~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~ga--Divv 343 (532)
+.+ |+++|++++++ ++++|+++ |++|...|+++|.++|+++|+++|+|++++.+...+....|. |+.+
T Consensus 108 ~~~~~~~~~d~~~l~~~i~~-~~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~ 183 (390)
T 3b8x_A 108 DIDINTLNIDIESLKEAVTD-STKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGT 183 (390)
T ss_dssp CBCTTTCSBCHHHHHHHCCT-TEEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEE
T ss_pred ecCccccCcCHHHHHHHhCc-CCeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEE
Confidence 653 89999999987 79999996 356777999999999999999999999998654434444565 5555
Q ss_pred ECC--ccccCCCCCcEEEEEEeCh-HHHHHHHHHhhh-----------------------------cCC--CccHHHHHH
Q 009523 344 HSA--TKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----------------------------LGG--ALNPNAAYL 389 (532)
Q Consensus 344 ~S~--sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~-----------------------------~G~--~~~~~~a~l 389 (532)
.|+ +|.++++ .||++++++ ++.++++..... .|. .+++..+++
T Consensus 184 ~s~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 260 (390)
T 3b8x_A 184 FSSFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAI 260 (390)
T ss_dssp EECCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHH
T ss_pred EEccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHH
Confidence 442 3444332 368888876 666666543210 111 156777777
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcC
Q 009523 390 IIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALK 468 (532)
Q Consensus 390 ~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-~~~~~~~l~~L~ 468 (532)
++..++.+..+.++..++++++.+.|++.|++. +..+. . .....++++.++.. ......+.+.|.
T Consensus 261 ~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--~-----------~~~~~~~~i~~~~~~~~~~~~l~~~L~ 326 (390)
T 3b8x_A 261 GIEQLKKLPRFISVRRKNAEYFLDKFKDHPYLD-VQQET--G-----------ESSWFGFSFIIKKDSGVIRKQLVENLN 326 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE-ECCCC--S-----------BCCCCEEEEEECTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cCCCC--C-----------CcccEEEEEEecCcCcccHHHHHHHHH
Confidence 777788888888888899999999998877653 22111 0 01123466666620 012344555554
Q ss_pred CCceeecCCCccccccc-Cccc--cc---cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 469 IPYIAPSFGGCESIVDQ-PAIM--SY---WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 469 ~~~i~vs~G~~~sl~~~-pa~~--s~---~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
..++.++.+-.-+...+ |... .| ..++..+.. ..+.|||+++...+++.++.+.++|
T Consensus 327 ~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 327 SAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYL----DKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHH----HHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred HCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHH----hcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 45666664210111112 2211 11 112221111 2468999999998888888887776
No 138
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.90 E-value=4.8e-23 Score=214.98 Aligned_cols=283 Identities=15% Similarity=0.141 Sum_probs=189.2
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcc---------c
Q 009523 197 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---------K 263 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~---------~ 263 (532)
.|..+..++++++++++++ .+++++++||++|+.+++.++. .+||+||+.++.|++.......... .
T Consensus 83 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p 162 (395)
T 1vef_A 83 TLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLP 162 (395)
T ss_dssp TSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCS
T ss_pred ccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCC
Confidence 3578899999999999995 4567888999999999998764 6899999999999764322111111 1
Q ss_pred CCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc------cc
Q 009523 264 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QK 333 (532)
Q Consensus 264 ~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~------~~ 333 (532)
...++..++..|+++|++++++ ++++|++++++||||.+.| +++|.++|+++|+++|+|++++.... .+
T Consensus 163 ~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~ 241 (395)
T 1vef_A 163 LVEPVEFIPYNDVEALKRAVDE-ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFE 241 (395)
T ss_dssp CSSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHH
T ss_pred CCCCeeEeCCCcHHHHHHHhcc-CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhh
Confidence 1112555666799999999987 7999999888899999988 99999999999999999999873211 12
Q ss_pred ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHHHHHH
Q 009523 334 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRM 411 (532)
Q Consensus 334 ~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~l 411 (532)
....++|++ |+||++++ | ...|++++++++++.++..........++..++.+...++.+.. ..++..++++++
T Consensus 242 ~~~~~~d~~--s~sK~~~~-g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l 317 (395)
T 1vef_A 242 HFGIVPDIL--TLAKALGG-G-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWF 317 (395)
T ss_dssp HHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred hcCCCCCEE--EEcccccC-C-CceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 234457877 78999997 4 34688888887777664421122233566666666666665432 344555677777
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccccccCcccc
Q 009523 412 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMS 490 (532)
Q Consensus 412 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~pa~~s 490 (532)
.+.|++.+. |.+. ...+.|+++++.++++ ...+.+.|. ..++.+..+
T Consensus 318 ~~~l~~~~~------~~~~----------~~~~~g~~~~~~~~~~---~~~l~~~l~~~~gi~v~~~------------- 365 (395)
T 1vef_A 318 MEKLRAIPS------PKIR----------EVRGMGLMVGLELKEK---AAPYIARLEKEHRVLALQA------------- 365 (395)
T ss_dssp HHHHHTSCC------TTEE----------EEEEETTEEEEEESSC---SHHHHHHHHHHHCEECEES-------------
T ss_pred HHHHHHhhc------CceE----------EEEEEEEEEEEEEcCh---HHHHHHHHHHHCCeEEecC-------------
Confidence 778876532 1000 0112467999999753 233444443 335544432
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 491 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 491 ~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.++.|||+++....++.++.+.++|+
T Consensus 366 --------------~~~~iRi~~~~~~~~~~i~~~~~~l~ 391 (395)
T 1vef_A 366 --------------GPTVIRFLPPLVIEKEDLERVVEAVR 391 (395)
T ss_dssp --------------STTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred --------------CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 14789999886544444444444443
No 139
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.90 E-value=5e-23 Score=218.91 Aligned_cols=283 Identities=13% Similarity=0.072 Sum_probs=182.5
Q ss_pred hhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE-------
Q 009523 201 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT------- 267 (532)
Q Consensus 201 p~~~~Le~~lA~l~----ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~------- 267 (532)
+...+|++++++++ +. ++.+++++|++++..+ .+++++||+|+++.|+|++....+ ...|.+
T Consensus 111 ~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~g~~~~~~ 185 (449)
T 3qgu_A 111 QGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTS----VMMGMTGDHNGTG 185 (449)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHH----HHHTCSCCBCSSS
T ss_pred CCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHH----HHcCCcccccccc
Confidence 45688999999997 43 4567777777999888 888999999999999999866443 333544
Q ss_pred ---EEEeCCCCHHHHHHhhcC-CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-----cccc
Q 009523 268 ---ATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKAL 335 (532)
Q Consensus 268 ---v~~vd~~dle~Le~al~~-~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l 335 (532)
+..++.++.+.+...+.+ .++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..... ....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 265 (449)
T 3qgu_A 186 FDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIY 265 (449)
T ss_dssp BTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGG
T ss_pred cceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHh
Confidence 666654432222111111 26899999999999999997 67888889999999999999765211 1111
Q ss_pred ----ccCCcEEEECCccccCCCCCcEEEEEEeChHHHH--------HHHHHhhhcCCCccHHHHHHHHHhH-----HHHH
Q 009523 336 ----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT--------QIRNLHHVLGGALNPNAAYLIIRGM-----KTLH 398 (532)
Q Consensus 336 ----~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~--------~l~~~~~~~G~~~~~~~a~l~l~~l-----~tl~ 398 (532)
..+.++++.|+||.+|..| ...|++++++++++ .+...........++..+..+...+ +.+.
T Consensus 266 ~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 344 (449)
T 3qgu_A 266 EIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344 (449)
T ss_dssp GSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred hccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence 1346799999999998554 35789998887654 3333333222344555544443333 3344
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCC
Q 009523 399 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFG 477 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G 477 (532)
...++..++++.+.+.|++. ++. +..| ..|.++++.+++ .....+.+.|. ..++.+..|
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~~~~~~--~~~~~~~~~l~~~~gI~v~pg 404 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM-GFS-VYGG----------------DDAPYIWVGFPG--KPSWDVFAEILERCNIVTTPG 404 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCC-EEES----------------SSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCe-eeCC----------------CCeeEEEEECCC--CCHHHHHHHHHHHCCEEEecc
Confidence 55566678888888888876 332 2111 136688998873 12233443332 236666666
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
..+. + ..++.||||+.. ++.++.++.|.++++
T Consensus 405 ~~f~----~-----------------~~~~~iRis~~~~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 405 SGYG----P-----------------AGEGFVRASAFGSRENILEAVRRFKEAYG 438 (449)
T ss_dssp GGGC----G-----------------GGTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred hHhC----C-----------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 4432 1 025799999865 334455555555554
No 140
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=1.5e-22 Score=219.62 Aligned_cols=274 Identities=12% Similarity=0.075 Sum_probs=192.7
Q ss_pred HHHHHHHhhhCCC----cE--EEeCCHHHHHHHHHHHhccCC--------CEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 205 VVEEKMSALEGAE----ST--VIMASGMSASTVMLLALVPAG--------GHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 205 ~Le~~lA~l~ga~----~~--i~~sSG~~Ai~~al~all~~G--------d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
++++.+++++|.+ .+ +++++|++|+..+++++.++| |+|+++.+.|.+... .+...|++++.
T Consensus 143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~----~~~~~G~~v~~ 218 (514)
T 3mad_A 143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK----AAQYFGIKLVR 218 (514)
T ss_dssp HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH----HHHHHTCEEEE
T ss_pred HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH----HHHHcCCeeEE
Confidence 4556668888875 45 888999999999999998776 999999999998553 34456888888
Q ss_pred eCCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc------------cc
Q 009523 271 IDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------------QK 333 (532)
Q Consensus 271 vd~~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~------------~~ 333 (532)
++.+ |+++|++++++ ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+.. .+
T Consensus 219 v~~~~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~ 297 (514)
T 3mad_A 219 TPLDADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD 297 (514)
T ss_dssp ECBCTTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS
T ss_pred eeeCCCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc
Confidence 8755 89999999987 799999999999999999999999999999999999999875422 22
Q ss_pred ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-h-----------hhcCCCcc--HHHHHHHHHhH--HHH
Q 009523 334 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H-----------HVLGGALN--PNAAYLIIRGM--KTL 397 (532)
Q Consensus 334 ~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-~-----------~~~G~~~~--~~~a~l~l~~l--~tl 397 (532)
....|+|+++.|++|+++++. ..|+++.+++.+...... . ...|.... ...++.+++.+ ..+
T Consensus 298 ~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~ 375 (514)
T 3mad_A 298 FRLEGVTSVSADTHKYGYGAK--GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGY 375 (514)
T ss_dssp TTSTTCCEEEECTTTTTCCCS--SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEECchhccCCCC--CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHH
Confidence 334588999999999965543 257776666544332110 0 00112111 23445444433 335
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009523 398 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 398 ~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G 477 (532)
..++++..++++++.+.|++.+++..+..+ .++++|..++ .....+.+.|...++.+ .|
T Consensus 376 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~------------------~~~~~~~~~~--~~~~~l~~~L~~~Gi~v-~g 434 (514)
T 3mad_A 376 LDATRRILQAADRLKAGVRAIPSLKILGDP------------------LWVIAVASDE--LNIYQVMEEMAGRGWRL-NG 434 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTCEESSCC------------------SSEEEEECSS--SCHHHHHHHHHTTTCBC-EE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeCCC------------------eEEEEEeCCC--CCHHHHHHHHHhcCCEe-cc
Confidence 667778888999999999987776432211 2378887654 22345566665445433 11
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEec-----CCCHHHHHHHHHHHHhh
Q 009523 478 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG-----VEDFEDLKADVLQALHA 531 (532)
Q Consensus 478 ~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG-----~ed~~dli~dL~~AL~~ 531 (532)
. + .++.+|++++ .++.+++++.|.+++++
T Consensus 435 -~-----------------------~-~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 435 -L-----------------------H-RPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp -E-----------------------T-TTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred -C-----------------------C-CCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 1 0 1357999987 36778888888888753
No 141
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.90 E-value=2.4e-22 Score=211.48 Aligned_cols=274 Identities=13% Similarity=0.095 Sum_probs=178.1
Q ss_pred HHHHHHHHHhhh----CCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC--
Q 009523 203 TVVVEEKMSALE----GAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-- 273 (532)
..+|++++++++ +.+ +++++++|++|+..++.+++++||+|+++.|+|.+... .+...|.++..++.
T Consensus 82 ~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~ 157 (418)
T 3rq1_A 82 IPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV----ICSDTGRTLVTYSLFD 157 (418)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH----HHHHTTCEEEEECSBC
T ss_pred hHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH----HHHHcCCEEEEEeeeC
Confidence 456667776654 455 67777777899999999999999999999999987553 34567888888864
Q ss_pred ----CCHHHHHHhhcCC---Cee-EEEEeCC-CCCCCcccCHHHHH---HHHH------hCCCEEEEECCCCCCCcc---
Q 009523 274 ----ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKLVS---DLCH------KKGAIVCIDGTFATPLNQ--- 332 (532)
Q Consensus 274 ----~dle~Le~al~~~---~tk-lV~lesP-~NptG~v~dl~~I~---~la~------~~gi~lIvDet~a~~~~~--- 332 (532)
.|+++|++++++. +++ +|++++| +||||.+.+.+++. ++|+ ++|+++|+|++|......
T Consensus 158 ~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~ 237 (418)
T 3rq1_A 158 EHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDE 237 (418)
T ss_dssp TTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHH
T ss_pred CCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHH
Confidence 2789999988741 344 8999999 99999999966555 5555 899999999997543211
Q ss_pred -cc-c----ccCCc---EEEECCccccCCCCCcEEEEEEe---ChHHHHHHHHHhhhc----CCCccHHHHHHHHHhHHH
Q 009523 333 -KA-L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVL----GGALNPNAAYLIIRGMKT 396 (532)
Q Consensus 333 -~~-l----~~gaD---ivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~~~~----G~~~~~~~a~l~l~~l~t 396 (532)
.+ . ....| +++.|+||.+|.+|. ..|++++ ++++++.++...... ....+...+..+...++.
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 316 (418)
T 3rq1_A 238 VRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQ-RVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVAD 316 (418)
T ss_dssp HHGGGGGGTTCCTTEEEEEEEESTTTTTCCSS-CCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCcCcCC-cceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCC
Confidence 01 1 11223 788999999986663 5788887 888988887654321 123455554444433322
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH
Q 009523 397 ----------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA 466 (532)
Q Consensus 397 ----------l~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~ 466 (532)
+....++..++++.+.+.|+++ ++. +..| ..|.++++.++. ...|.+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~~~~~~----~~~~~~~ 374 (418)
T 3rq1_A 317 PAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP-MLPY----------------RGGFFITIPTDS----ANAICEE 374 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCC----------------CSSSEEEEECTT----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCC----------------CceEEEEcCCCC----HHHHHHH
Confidence 1122234446666777777764 221 1111 124466666642 2334444
Q ss_pred cCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHhh
Q 009523 467 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALHA 531 (532)
Q Consensus 467 L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~---ed~~dli~dL~~AL~~ 531 (532)
|...++.+..| .+.+|||++. ++.+++++.|.+++++
T Consensus 375 l~~~gi~v~~g----------------------------~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 375 LKKEHIYVIAL----------------------------ANGIRIAACGIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp HHHTTEECEEC----------------------------SSEEEEEGGGSCHHHHTTHHHHHHHHHHH
T ss_pred HHhCCEEEecC----------------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 44446655443 3579999983 3345567777777654
No 142
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.90 E-value=4e-22 Score=216.05 Aligned_cols=201 Identities=12% Similarity=0.141 Sum_probs=145.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCC----EEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-------CHHHHHHhhcC
Q 009523 217 ESTVIMASGMSASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNN 285 (532)
Q Consensus 217 ~~~i~~sSG~~Ai~~al~all~~Gd----~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-------dle~Le~al~~ 285 (532)
+++++++++++|+.+++.+++++|| +|+++.|.|..... .+...|.++..++.+ |+++|++++++
T Consensus 154 ~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~----~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~ 229 (498)
T 3ihj_A 154 DNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSA----VISELDAIQVNYYLDEENCWALNVNELRRAVQE 229 (498)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHH----HHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHH
T ss_pred ccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEeeccccccCCCCHHHHHHHHHh
Confidence 4677888888999999999999875 99999999987553 344567777776543 89999999875
Q ss_pred C----CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCccc-----cc-c----cC-------CcE
Q 009523 286 N----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL-S----LG-------ADL 341 (532)
Q Consensus 286 ~----~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~-----~l-~----~g-------aDi 341 (532)
. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... ++ . .+ ..+
T Consensus 230 ~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i 309 (498)
T 3ihj_A 230 AKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELA 309 (498)
T ss_dssp HTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEE
T ss_pred hhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEE
Confidence 2 4899999999999999987 5678999999999999999987643211 11 0 11 137
Q ss_pred EEECCccccCCCCCcEEEEEE---eChHHHHHHHHHhhhcCCCccHHHHHHHHHh--------------HHHHHHHHHHH
Q 009523 342 VLHSATKFIGGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLIIRG--------------MKTLHLRVQQQ 404 (532)
Q Consensus 342 vv~S~sK~lgg~gd~~gG~lv---~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~--------------l~tl~~r~~~~ 404 (532)
+++|+||.+.|..+.++||++ +++++++.+....... .+.+....+++... ++.+....++.
T Consensus 310 ~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l 388 (498)
T 3ihj_A 310 SFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVR-LCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNL 388 (498)
T ss_dssp EEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHS-CCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHH
T ss_pred EEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhcc-CCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHH
Confidence 889999999542235688887 6888888887765532 33344433333222 23334445666
Q ss_pred HHHHHHHHHHHHhCCCce
Q 009523 405 NSTALRMAKILEAHPKVK 422 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~ 422 (532)
.++++.+.+.|+++|++.
T Consensus 389 ~~~~~~l~~~L~~~~g~~ 406 (498)
T 3ihj_A 389 AKKAKLTEDLFNQVPGIH 406 (498)
T ss_dssp HHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHhcCCCcE
Confidence 788889999999877653
No 143
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.90 E-value=3.4e-23 Score=216.47 Aligned_cols=283 Identities=13% Similarity=0.130 Sum_probs=190.8
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc------C-CCEEEEcCCCCcchHH-HHHHhcccCCcE--
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------A-GGHIVTTTDCYRKTRI-FIETVLPKMGIT-- 267 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~------~-Gd~VIv~~~~y~~t~~-~~~~~l~~~Gv~-- 267 (532)
|.++..++++++|++++|.+++++++||++|+..++..+.. + +|+|++.++.|++... .+. . .|.+
T Consensus 79 ~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~-~---~g~~~~ 154 (397)
T 2ord_A 79 FWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLT-A---TGQPKY 154 (397)
T ss_dssp SEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHH-H---SBCHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhh-c---cCChhh
Confidence 56788999999999999988899999999999999988753 5 4789999999977443 222 1 2222
Q ss_pred ----------EEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCc-c---cCHHHHHHHHHhCCCEEEEECCCCCCCc--
Q 009523 268 ----------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-C---VDVKLVSDLCHKKGAIVCIDGTFATPLN-- 331 (532)
Q Consensus 268 ----------v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~-v---~dl~~I~~la~~~gi~lIvDet~a~~~~-- 331 (532)
+..++..|+++|++++++ ++++|++++|+||||. + .++++|.++|+++|+++|+|+++.....
T Consensus 155 ~~~~~p~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g 233 (397)
T 2ord_A 155 QKPFEPLVPGFEYFEFNNVEDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG 233 (397)
T ss_dssp HGGGCSCCTTEEEECTTCHHHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred ccccCCCCCCeeEecCCCHHHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc
Confidence 667777899999999987 7999999999999999 4 4588999999999999999999863211
Q ss_pred --c--cccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHH
Q 009523 332 --Q--KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQN 405 (532)
Q Consensus 332 --~--~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~ 405 (532)
. ..+....|++ |++|+++++ ...|+++++++++ .++..........++..++.+...++.+. ...++..
T Consensus 234 ~~~~~~~~~~~~d~~--s~sK~~~~G--~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 308 (397)
T 2ord_A 234 KLFAYQKYGVVPDVL--TTAKGLGGG--VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVE 308 (397)
T ss_dssp SSSHHHHHTCCCSEE--EECGGGGTT--SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHH
T ss_pred cchhhhhhCCCCCee--eeccccCCC--cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 1 1112236876 678999953 3567888887765 54322222223456777766666666543 2345555
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccccc
Q 009523 406 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 406 ~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~ 485 (532)
++++++.+.|++.+. .+|.+. ...+.|++++|++++. .....+.+.|...++.+..|
T Consensus 309 ~~~~~l~~~L~~~~~----~~~~~~----------~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~-------- 365 (397)
T 2ord_A 309 EKGNYLMKKLQEMKE----EYDVVA----------DVRGMGLMIGIQFREE-VSNREVATKCFENKLLVVPA-------- 365 (397)
T ss_dssp HHHHHHHHHHHHHHH----HCTTEE----------EEEEETTEEEEEECTT-SCHHHHHHHHHHTTEECEEE--------
T ss_pred HHHHHHHHHHHHHHH----hCCceE----------EEEEEeEEEEEEECCh-HHHHHHHHHHHHCCCEEccC--------
Confidence 667777777765310 011100 0122467899999743 12345555554446554432
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhhC
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHAI 532 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~l 532 (532)
.++.+||+++. ++.+++++.|.+++++|
T Consensus 366 -------------------~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 397 (397)
T 2ord_A 366 -------------------GNNTIRFLPPLTVEYGEIDLAVETLKKVLQGI 397 (397)
T ss_dssp -------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred -------------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHhhC
Confidence 14689999654 44566677777776654
No 144
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.90 E-value=1.9e-22 Score=210.63 Aligned_cols=291 Identities=16% Similarity=0.083 Sum_probs=193.6
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEe
Q 009523 199 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 271 (532)
Q Consensus 199 ~~p~~~~Le----~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~v 271 (532)
+++....++ +++++++|.+.. +++++|++|+..++.+++++||+|+++.++|++..... ..+...|. ....+
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 141 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSY 141 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEec
Confidence 556544555 499999998755 77899999999999999999999999999998763111 11222233 33344
Q ss_pred C------CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-----ccccccCCc
Q 009523 272 D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGAD 340 (532)
Q Consensus 272 d------~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~gaD 340 (532)
+ ..|+++|++++++.++++|++++|+|| .+.|+++|.++|+++|+++|+|++|+.++. ..+.. .+|
T Consensus 142 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~d 218 (407)
T 2dkj_A 142 GVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAH 218 (407)
T ss_dssp CCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCS
T ss_pred CCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-ccc
Confidence 2 247999999997435899999999997 678999999999999999999999875221 11122 379
Q ss_pred EEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcC-CCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHH
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAK 413 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G-~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~ 413 (532)
+++.|+||+++|+. +|+++++ +++++.++....... +..++.....+...++ .+....++..++++++.+
T Consensus 219 i~~~s~sK~l~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 295 (407)
T 2dkj_A 219 VVTSTTHKTLRGPR---GGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAE 295 (407)
T ss_dssp EEEEESSGGGCCCS---CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCC---ceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999998653 6999998 788888876543222 2334432222222332 334556667788888888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccC
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 493 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~ 493 (532)
.|++. ++. +..| .+.|+++++.++........+.+.|...++.+..|.... |..
T Consensus 296 ~L~~~-g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~---------~~~ 349 (407)
T 2dkj_A 296 ELARR-GYR-IVTG---------------GTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPF---------DPK 349 (407)
T ss_dssp HHHHT-TCE-EGGG---------------SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTT---------CSS
T ss_pred HHHhC-Cce-eecC---------------CCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcc---------ccc
Confidence 88876 443 2211 114678999987311123445555555577776664310 000
Q ss_pred CCHHHHHhcCCCCCeEEEEec--------CCCHHHHHHHHHHHHh
Q 009523 494 LSQSERLKYGIMDNLVRFSFG--------VEDFEDLKADVLQALH 530 (532)
Q Consensus 494 ~~~~~~~~~gi~~~~IRlSvG--------~ed~~dli~dL~~AL~ 530 (532)
. ...++.+|+|++ .++.+.+++.|.++++
T Consensus 350 -~-------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 386 (407)
T 2dkj_A 350 -P-------PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALL 386 (407)
T ss_dssp -C-------TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHH
T ss_pred -c-------ccCCCceeeecccccccCCCHHHHHHHHHHHHHHHh
Confidence 0 012468999984 3667788888877765
No 145
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=3.4e-22 Score=216.76 Aligned_cols=285 Identities=14% Similarity=0.034 Sum_probs=194.4
Q ss_pred HHHHHHHhhhCCC-------cEEEeCCHHHHHHHHHHHhccC--------CC-----EEEEcCCCCcchHHHHHHhcccC
Q 009523 205 VVEEKMSALEGAE-------STVIMASGMSASTVMLLALVPA--------GG-----HIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 205 ~Le~~lA~l~ga~-------~~i~~sSG~~Ai~~al~all~~--------Gd-----~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
++++.+++++|.+ ..+++++|++|+.+++.++..+ || +|+++.+.|.... ..+...
T Consensus 99 ~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~----~~~~~~ 174 (502)
T 3hbx_A 99 RCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE----KFARYF 174 (502)
T ss_dssp HHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH----HHHHHT
T ss_pred HHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH----HHHHHc
Confidence 4556688888876 3456899999999998887655 77 9999999998744 345567
Q ss_pred CcEEEEeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC------CCEEEEECCCCCCCc-
Q 009523 265 GITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPLN- 331 (532)
Q Consensus 265 Gv~v~~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~------gi~lIvDet~a~~~~- 331 (532)
|++++.++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++ |+++++|++++.+..
T Consensus 175 G~~~~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p 253 (502)
T 3hbx_A 175 EVELKEVKLSEGYYVMDPQQAVDMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAP 253 (502)
T ss_dssp TCEEEEECCBTTBCSCCHHHHHHHCCT-TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH
T ss_pred CceeEEEecCCCcCcCCHHHHHHHHhh-CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhh
Confidence 8888888642 79999999988 699999999999999999999999999999 999999999874321
Q ss_pred --ccc-----cccCCcEEEECCccccCCCCCcEEEEEEeChHHHHH-HHHHhhhcC----------CCc--cHHHHHHHH
Q 009523 332 --QKA-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHHVLG----------GAL--NPNAAYLII 391 (532)
Q Consensus 332 --~~~-----l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~-l~~~~~~~G----------~~~--~~~~a~l~l 391 (532)
... ...++|++..|+||+++++.+. |++++.+++.+.. +.......+ ... .....|.++
T Consensus 254 ~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~-G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al 332 (502)
T 3hbx_A 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGI-GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (502)
T ss_dssp HHCTTCCCSTTSTTEEEEEEETTTTTCCCSSC-EEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHH
T ss_pred hhCcccccccCCCCceEEEECcccccCCCCCe-EEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHH
Confidence 111 1247899999999999766532 3344444544422 111001111 111 233445544
Q ss_pred H--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcC
Q 009523 392 R--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALK 468 (532)
Q Consensus 392 ~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~ 468 (532)
+ +.+.+..++++..++++++.+.|++++++..+. +. + ..+++.|.++++. .....+.+.|.
T Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~----~-----------~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (502)
T 3hbx_A 333 IRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVS-KD----E-----------GVPLVAFSLKDSSCHTEFEISDMLR 396 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECS-CS----S-----------SSSEEEEEESSCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-CC----C-----------CceEEEEEecCCCcCCHHHHHHHHH
Confidence 4 445677888889999999999999988765432 21 0 2458999997531 22345666666
Q ss_pred CCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 469 IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 469 ~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
..|+.++.. ..|... .....+|++++. |+.++++++|+++++.
T Consensus 397 ~~Gi~v~~~------~~p~~~--------------~~~~~lRisv~~~~t~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 397 RYGWIVPAY------TMPPNA--------------QHITVLRVVIREDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp TTTCBCCEE------ECCTTC--------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hCCcEEeec------cCCccc--------------CCceEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 556544311 112110 024689999994 5566777777777653
No 146
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.90 E-value=7.1e-22 Score=209.85 Aligned_cols=310 Identities=15% Similarity=0.137 Sum_probs=204.3
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh---------ccCCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al---------l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
+..+...++++++++++|.+++++++||++|+..++.++ +++||+|+++.++|+++...+ ...|+++
T Consensus 59 ~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~ 134 (437)
T 3bb8_A 59 TTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIP 134 (437)
T ss_dssp BSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEE
T ss_pred CCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEE
Confidence 356789999999999999999999999999999999998 789999999999999876443 3468888
Q ss_pred EEeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccC--Cc
Q 009523 269 TVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--AD 340 (532)
Q Consensus 269 ~~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~g--aD 340 (532)
.+++.+ |+++|++++++ ++++|++++ ++|...|+++|.++|+++|+++|+|++++.+...+....| .|
T Consensus 135 ~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d 210 (437)
T 3bb8_A 135 VFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGD 210 (437)
T ss_dssp EECCEETTTTEECGGGHHHHCCT-TEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSS
T ss_pred EEEeccCccCCcCHHHHHHhcCC-CCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccC
Confidence 887643 79999999987 799999963 2355589999999999999999999999865433333445 79
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHH-HHHHhh---h----------------------------------cC--C
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHH---V----------------------------------LG--G 380 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~-l~~~~~---~----------------------------------~G--~ 380 (532)
+++.|++|..+-++. .+|+++++++.+.. ++.... . .| .
T Consensus 211 ~~~~s~~~~k~l~~g-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 289 (437)
T 3bb8_A 211 IGTVSFYPAKHITMG-EGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNL 289 (437)
T ss_dssp EEEEECSTTSSSCCS-SCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBC
T ss_pred EEEEECcCCcCCCCC-CeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCccc
Confidence 998887544433322 47999998665443 222110 0 01 1
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCc-ccEEEEEEcCCHHH
Q 009523 381 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGF-GGVVSFEVDGDLTA 459 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~-G~~vsf~l~g~~~~ 459 (532)
.+++..+.+++..++.+..+++++.++++++.+.|++.+++.. +|..+... ..+. ..++.|..+.+ ..
T Consensus 290 ~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~-~~ 358 (437)
T 3bb8_A 290 KITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFIE--LPEATENS--------DPSWFGFPITLKEDSG-VS 358 (437)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTEE--CCCCCTTE--------ECCCSSEEEEECGGGS-SC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccc--cCCCCCCC--------ceeeEEEEEEECCcCc-Cc
Confidence 2346666666667777777777888888889999988766532 33221000 0001 11344443211 12
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCcccc-----ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMS-----YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s-----~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
...+.+.|...++.++.+....+..+|.... ...++..++. ..+.|||+++...+++.++.+.++|.+
T Consensus 359 ~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~t~~di~~i~~~l~~ 431 (437)
T 3bb8_A 359 RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRI----MNQTFWIGIYPGLTHDHLDYVVSKFEE 431 (437)
T ss_dssp HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHH----HHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHH----hcCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 3455666655577777654321111222100 0112222211 245799999988777777777777653
No 147
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.90 E-value=9.2e-22 Score=209.16 Aligned_cols=289 Identities=15% Similarity=0.162 Sum_probs=185.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---------cCC-CEEEEcCCCCcchHHHHHHhcc-----
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 262 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all---------~~G-d~VIv~~~~y~~t~~~~~~~l~----- 262 (532)
+.++...+|+++|+++.|.+++++++||++|+..+++.+. .+| |+||+.++.|++..........
T Consensus 104 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~ 183 (433)
T 1z7d_A 104 FFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCT 183 (433)
T ss_dssp SEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC------------------
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCcccc
Confidence 5678899999999999998889999999999999998753 367 9999999999875321111111
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc----CHHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 263 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 263 ----~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~----dl~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
.....+..++..|+++|+++++..++++|++|..+|++|.+. ++++|.++|++||+++|+||++.....
T Consensus 184 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~ 263 (433)
T 1z7d_A 184 SNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK 263 (433)
T ss_dssp --------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc
Confidence 111355667778999999999433799999987778899876 699999999999999999999853211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHH
Q 009523 332 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 406 (532)
Q Consensus 332 ---~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~ 406 (532)
.+......|++ |++|.++++ ...+|++++++++++.+...........++..++.+...++.+.. ..++..+
T Consensus 264 ~~~~~~~~~~~di~--t~sK~l~~G-~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 264 LLCVHHYNVKPDVI--LLGKALSGG-HYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGTT-SSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhhHhcCCCCCEE--EECccccCC-CCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 12233457876 688999953 245789999998877664422112223467777666666665532 3445556
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
+.+++.+.|++... .+|.. ...++.|.+++|++++.......+.+.|...++.+..+
T Consensus 341 ~~~~l~~~L~~l~~----~~~~~----------~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~--------- 397 (433)
T 1z7d_A 341 LGGPFLENLKRELK----DSKIV----------RDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDV--------- 397 (433)
T ss_dssp HHHHHHHHHHHHHT----TCTTE----------EEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE---------
T ss_pred HHHHHHHHHHHHHH----hCCCe----------EEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC---------
Confidence 66667666654210 01110 01134578999999742112445555554445544321
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGVED----FEDLKADVLQALH 530 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed----~~dli~dL~~AL~ 530 (532)
.++.|||++++.. .+.+++.|.++++
T Consensus 398 ------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 398 ------------------HDKTIRLTPPLCITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp ------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 1468999887643 4445555555544
No 148
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4e-22 Score=215.09 Aligned_cols=276 Identities=12% Similarity=0.083 Sum_probs=193.7
Q ss_pred HHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc-----CC---CEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 204 VVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP-----AG---GHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 204 ~~Le~~lA~l~ga~----~~i~~sSG~~Ai~~al~all~-----~G---d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
+++++.+++++|.+ ..+++++|++|+.++++++.+ +| |+|+++.+.|.+... .+...|++++.+
T Consensus 110 ~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~----~~~~~G~~~~~v 185 (497)
T 3mc6_A 110 SEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDK----AAYYFGMKLRHV 185 (497)
T ss_dssp HHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHH----HHHHSCCEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHH----HHHHcCCeEEEE
Confidence 34556678888865 578888999999999998865 56 899999999988553 445568888888
Q ss_pred CCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-------------cc
Q 009523 272 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-------------NQ 332 (532)
Q Consensus 272 d~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-------------~~ 332 (532)
+.+ |+++|++++++ ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. ..
T Consensus 186 ~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~ 264 (497)
T 3mc6_A 186 ELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL 264 (497)
T ss_dssp CBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC
T ss_pred ecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccc
Confidence 643 58999999987 69999999999999999999999999999999999999987321 13
Q ss_pred cccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCC----------Ccc--HHHHHHHHHhHH--H
Q 009523 333 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGG----------ALN--PNAAYLIIRGMK--T 396 (532)
Q Consensus 333 ~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~----------~~~--~~~a~l~l~~l~--t 396 (532)
+....|+|+++.|++|+++++. ..|+++.+++.+....... ...++ ... ...++.+++.+. .
T Consensus 265 ~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~ 342 (497)
T 3mc6_A 265 DFRVPGVTSISCDTHKYGFAPK--GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENG 342 (497)
T ss_dssp STTSTTCCEEEEETTTTTCCCS--SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEECchhhcCCCC--CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHH
Confidence 3345689999999999975543 2577777765544321100 00111 011 233555555443 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec
Q 009523 397 LHLRVQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 475 (532)
Q Consensus 397 l~~r~~~~~~~a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs 475 (532)
+..++++..++++++.+.|++ .|++..+..| .++++.|..++ .....+.+.|...++.++
T Consensus 343 ~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~-----------------~~~~v~~~~~~--~~~~~l~~~L~~~Gi~v~ 403 (497)
T 3mc6_A 343 YIESCQEIVGAAMKFKKYIQENIPDLDIMGNP-----------------RYSVISFSSKT--LNIHELSDRLSKKGWHFN 403 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC-----------------CSSEEEEECTT--TTHHHHHHHHHTTTCBCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-----------------CeeEEEEeCCC--CCHHHHHHHHHhCCEEEe
Confidence 456677788899999999999 5776533222 35678887654 234556666655565443
Q ss_pred CCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec---CCCHHHHHHHHHHHHhh
Q 009523 476 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG---VEDFEDLKADVLQALHA 531 (532)
Q Consensus 476 ~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG---~ed~~dli~dL~~AL~~ 531 (532)
.+. ..+.+|+++. .++.++++++|.++++.
T Consensus 404 ~~~--------------------------~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 404 ALQ--------------------------KPVALHMAFTRLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp ECC--------------------------SSCCEEEECCTTTTCTHHHHHHHHHHHHHH
T ss_pred cCC--------------------------CCCeEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 221 1235688775 47788999999888763
No 149
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.89 E-value=3.3e-21 Score=203.65 Aligned_cols=210 Identities=17% Similarity=0.215 Sum_probs=164.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~----- 274 (532)
.+...+|++++++++|.+++++++||++|+.+++.++. +||+|++++++|++... .+...|+++.+++.+
T Consensus 51 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~----~~~~~G~~~~~v~~~~~~~~ 125 (424)
T 2po3_A 51 GPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFAATPH----ALRWIGLTPVFADIDPDTGN 125 (424)
T ss_dssp CHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTSS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCcCC
Confidence 37889999999999999989999999999999999875 79999999999998664 344568888888643
Q ss_pred -CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc--cccccCCcEEEECCc--cc
Q 009523 275 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--KF 349 (532)
Q Consensus 275 -dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~--~~l~~gaDivv~S~s--K~ 349 (532)
|+++|++++++ ++++|+++ ||+|.+.++++|.++|+++|+++|+|++++.+... .++....|+++.|+| |.
T Consensus 126 ~d~~~l~~~i~~-~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~ 201 (424)
T 2po3_A 126 LDPDQVAAAVTP-RTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKA 201 (424)
T ss_dssp BCHHHHGGGCCT-TEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCc-CCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCC
Confidence 78999999987 79999984 48999999999999999999999999998854322 222223689999998 88
Q ss_pred cCCCCCcEEEEEEeC-hHHHHHHHHHhhhc------------CCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 009523 350 IGGHNDVLAGSISGS-GKLVTQIRNLHHVL------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 416 (532)
Q Consensus 350 lgg~gd~~gG~lv~~-~~li~~l~~~~~~~------------G~~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~ 416 (532)
++|. .+|+++++ +++++.++...... ...+++..+++++..++.+....++..++++++.+.|+
T Consensus 202 l~~~---~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 278 (424)
T 2po3_A 202 VNAF---EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLA 278 (424)
T ss_dssp SCCS---SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCC---CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8763 47999998 78888877644321 11345666666666666666666777777888888887
Q ss_pred hCCCc
Q 009523 417 AHPKV 421 (532)
Q Consensus 417 ~~p~v 421 (532)
+.|++
T Consensus 279 ~~~g~ 283 (424)
T 2po3_A 279 DLPGV 283 (424)
T ss_dssp SCTTE
T ss_pred cCCCc
Confidence 76655
No 150
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.89 E-value=1.9e-21 Score=207.27 Aligned_cols=288 Identities=15% Similarity=0.108 Sum_probs=192.8
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhc---------cCC-CEEEEcCCCCcchHHHHHHhcc-----
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 262 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all---------~~G-d~VIv~~~~y~~t~~~~~~~l~----- 262 (532)
+.++...+++++|++++|.+.+++++||++|+..+++.+. .+| |+||+.++.|++..........
T Consensus 115 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~ 194 (439)
T 2oat_A 115 FYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSY 194 (439)
T ss_dssp SEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcc
Confidence 5678899999999999998889999999999999998764 357 8999999999875322111111
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc----CHHHHHHHHHhCCCEEEEECCCCCCC----
Q 009523 263 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPL---- 330 (532)
Q Consensus 263 ----~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~----dl~~I~~la~~~gi~lIvDet~a~~~---- 330 (532)
.....+..++..|+++|+++++..++++|++|..+|++|.+. ++++|.++|++||+++|+||++....
T Consensus 195 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~ 274 (439)
T 2oat_A 195 DGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR 274 (439)
T ss_dssp TTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred cCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc
Confidence 111456677778999999999533799999987778899877 69999999999999999999984321
Q ss_pred --cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHH
Q 009523 331 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 406 (532)
Q Consensus 331 --~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~ 406 (532)
..+......|++ |++|.++++ ...+|++++++++++.+...........++..+..+...++.+.. ..++..+
T Consensus 275 ~~~~~~~~~~~Di~--t~sK~l~~G-~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 351 (439)
T 2oat_A 275 WLAVDYENVRPDIV--LLGKALSGG-LYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADK 351 (439)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGTT-SSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhHHHhCCCCcEE--EecccccCC-CCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 112233456876 788999963 235789999988877665422212223467777666666665532 3445556
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCccccccc
Q 009523 407 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 407 ~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl~~~ 485 (532)
+.+++.+.|++.. +|.. ...++.|.+++++++... .....+.+.|...++.+..+
T Consensus 352 ~~~~l~~~L~~l~------~~~~----------~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~-------- 407 (439)
T 2oat_A 352 LGIILRNELMKLP------SDVV----------TAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT-------- 407 (439)
T ss_dssp HHHHHHHHHTTSC------TTTE----------EEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS--------
T ss_pred HHHHHHHHHHHhc------CCCc----------EEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecC--------
Confidence 6667777776531 1110 011346789999997530 12345555554445544321
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 531 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~~ 531 (532)
.++.|||++++. +.+++++.|.+++++
T Consensus 408 -------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 408 -------------------HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp -------------------SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -------------------CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 147899988753 445555556665554
No 151
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.89 E-value=4.5e-22 Score=203.58 Aligned_cols=285 Identities=13% Similarity=0.060 Sum_probs=190.4
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEE
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 269 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~ 269 (532)
.|.+++...+..+++++.+++++|.+ +++++++|++|+..++.+++++||+|+++++.|++.... ..++..|+++.
T Consensus 40 ~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~ 117 (359)
T 1svv_A 40 TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHET--GAIEATGHKVV 117 (359)
T ss_dssp CCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEE
T ss_pred hccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeE
Confidence 46666677888999999999999864 477788889999999999999999999999999875431 02455688888
Q ss_pred EeCCC----CHHHHHHhhcCC------CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCC---CCC---C
Q 009523 270 VIDPA----DMEGLEAALNNN------NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF---ATP---L 330 (532)
Q Consensus 270 ~vd~~----dle~Le~al~~~------~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~---a~~---~ 330 (532)
.++.+ |+++|++++++. ++++|++++| ||||.+.| +++|.++|+++|+++|+|+++ ..+ .
T Consensus 118 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 196 (359)
T 1svv_A 118 TAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN 196 (359)
T ss_dssp EECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC
T ss_pred EEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc
Confidence 88754 589999999763 2899999999 79999998 889999999999999999997 211 1
Q ss_pred ccccc--ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhHH--HHHHHHHHH
Q 009523 331 NQKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMK--TLHLRVQQQ 404 (532)
Q Consensus 331 ~~~~l--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~~~~~a~l~l~~l~--tl~~r~~~~ 404 (532)
..... ..+.|+++.|++|+.++.+ .|+++.++++++.++......+.. .+......+...++ .+....++.
T Consensus 197 ~~~~~~~~~~~d~~~~s~~K~g~~~~---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 273 (359)
T 1svv_A 197 DLTLADIARLTDMFYIGATKAGGMFG---EALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHS 273 (359)
T ss_dssp CCCHHHHHHHCSEEEEECTTTTCSSC---EEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHH
T ss_pred chhhhhhhhcCCEEEEecccCCCCCc---eEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHH
Confidence 11211 1357999999999855432 588888888877766542222221 11111111111121 233445566
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCccccc
Q 009523 405 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIV 483 (532)
Q Consensus 405 ~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~-~i~vs~G~~~sl~ 483 (532)
.++++++.+.| +.+++. +..|. .+.++++.++ ..+.+.|... ++.+ +|.
T Consensus 274 ~~~~~~l~~~L-~~~~~~-~~~~~----------------~~~~~~~~~~------~~~~~~l~~~~gi~v-~~~----- 323 (359)
T 1svv_A 274 NKMAAILKAGL-EACGIR-LAWPS----------------ASNQLFPILE------NTMIAELNNDFDMYT-VEP----- 323 (359)
T ss_dssp HHHHHHHHHHH-HHTTCC-BSSCC----------------SSSEECBEEE------HHHHHHHTTTEECEE-EEE-----
T ss_pred HHHHHHHHHHh-ccCCeE-EccCC----------------ccceEEEEcC------HHHHHHHHHhcCEEE-Eec-----
Confidence 67778888888 445442 21121 3556777775 2455566544 5544 110
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.+ ..++.|||+++....++.++.+.++|+
T Consensus 324 -~~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~ 352 (359)
T 1svv_A 324 -LK-----------------DGTCIMRLCTSWATEEKECHRFVEVLK 352 (359)
T ss_dssp -ET-----------------TTEEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred -cc-----------------CCCceEEEEccCcCCHHHHHHHHHHHH
Confidence 00 124689999987555555555555544
No 152
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=8.9e-22 Score=205.20 Aligned_cols=290 Identities=15% Similarity=0.125 Sum_probs=192.0
Q ss_pred hhHHHHHHHHHhhhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCC--cEEEEeC-----
Q 009523 201 PTTVVVEEKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVID----- 272 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~i~-~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~G--v~v~~vd----- 272 (532)
...+++++.+++++|.++.++ ++||++|+++++. ++++||+||+..+.|++.. +...+...| .++.+++
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g 111 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTE 111 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEeccccc
Confidence 567788999999999876554 5688999999875 4579999999999998743 223334444 3555543
Q ss_pred ---------CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcccccccCCc
Q 009523 273 ---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGAD 340 (532)
Q Consensus 273 ---------~~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaD 340 (532)
..|++++++++++.++++|++.+++|++|.+.| +++|.++|+++|+++|+|++++.....+...+|+|
T Consensus 112 ~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~g~~~~~~~~~~~d 191 (379)
T 3ke3_A 112 DTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIASGCVWLDMKELGID 191 (379)
T ss_dssp CCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTCTTCCCCHHHHTCS
T ss_pred cccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecccCCccccccccCCC
Confidence 358999999995336899999999999999999 99999999999999999999873334445566899
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh-----------------hhcC-----CCccHHHHHHHHHhHHHH-
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----------------HVLG-----GALNPNAAYLIIRGMKTL- 397 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----------------~~~G-----~~~~~~~a~l~l~~l~tl- 397 (532)
+++.|++|+++++. .+|++++++++++.+.... ...| .+.++...+.+..+++.+
T Consensus 192 ~~~~s~~K~l~~~~--g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~ 269 (379)
T 3ke3_A 192 VLISAPQKGWSSTP--CAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAK 269 (379)
T ss_dssp EEEECTTTTTCSCC--CEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCCCC--ceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999998764 2689999998887775311 0011 244555444444444433
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009523 398 ----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 473 (532)
Q Consensus 398 ----~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~ 473 (532)
..+.++..++++++.+.|++. ++. +..+. . ...+.+..+.+++ .. . .+...|...++.
T Consensus 270 ~~g~~~~~~~~~~l~~~l~~~l~~~-g~~-~~~~~-----~--------~~~~~i~~~~~~~-~~-~-~~~~~L~~~Gi~ 331 (379)
T 3ke3_A 270 EIGFDILRDAQWELGNRVRKVLTDK-GIE-SVAAE-----G--------FEAPGVVVSYTER-DD-M-HKGSAFAEAGLQ 331 (379)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSBCT-----T--------CBCSSEEEEECSC-HH-H-HSSHHHHHTTCC
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc-CCE-ecCCc-----c--------ccCceEEEEccCC-cc-h-HHHHHHHHCCeE
Confidence 344455567777788888775 232 11111 0 0123455555543 22 1 113334444666
Q ss_pred ecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 474 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 474 vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
++.|..++. ..| ...+.||+|+.. ++++.+++.|++++++
T Consensus 332 v~~g~~~~~-~~~-----------------~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 332 IAAGVPLKV-GEP-----------------DNFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp CEECCCCSS-CCC-----------------TTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred EeCCccccc-ccc-----------------CcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 665532110 000 125789999874 6777777777777654
No 153
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.89 E-value=1.4e-21 Score=206.83 Aligned_cols=285 Identities=14% Similarity=0.140 Sum_probs=192.2
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHHhcc------
Q 009523 197 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP------ 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~-------~G-d~VIv~~~~y~~t~~~~~~~l~------ 262 (532)
.+.++...+|+++|+++.|.+++++++||++|+..+++.+.. +| ++||+.++.|++..........
T Consensus 95 ~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~ 174 (420)
T 2pb2_A 95 VFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSD 174 (420)
T ss_dssp TSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHT
T ss_pred ccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccc
Confidence 457789999999999999988899999999999999998765 77 4999999999875322211111
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcc----cCHHHHHHHHHhCCCEEEEECCCCCCCc----
Q 009523 263 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC----VDVKLVSDLCHKKGAIVCIDGTFATPLN---- 331 (532)
Q Consensus 263 ---~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v----~dl~~I~~la~~~gi~lIvDet~a~~~~---- 331 (532)
.....+..++..|+++|++++++ ++++|++|+++|++|.+ .++++|.++|+++|+++|+||++.....
T Consensus 175 ~~~p~~~~~~~~~~~d~~~le~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~ 253 (420)
T 2pb2_A 175 GFGPKPADIIHVPFNDLHAVKAVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDL 253 (420)
T ss_dssp TSSSCCSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cCCCCCCCeEEecCCCHHHHHHHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcH
Confidence 11123666777799999999987 79999999998888852 3588999999999999999999853211
Q ss_pred --ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHH
Q 009523 332 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 407 (532)
Q Consensus 332 --~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~ 407 (532)
.+......|++ |++|.+++ | ...|++++++++++.++..........++..++.+...++.+. ...++..++
T Consensus 254 ~~~~~~~~~~dii--t~sK~l~~-G-~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~ 329 (420)
T 2pb2_A 254 FAYMHYGVTPDIL--TSAKALGG-G-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTK 329 (420)
T ss_dssp SHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHH
T ss_pred HHHHhcCCCCCeE--EecccccC-C-CceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 12233457877 57899995 3 3578888888877665442111122346777776666666542 334555566
Q ss_pred HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccc
Q 009523 408 ALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESI 482 (532)
Q Consensus 408 a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl 482 (532)
.+++.+.|++. |.+..+ ++.|.+++|+++... .....+.+.|...++.+..|
T Consensus 330 ~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~----- 386 (420)
T 2pb2_A 330 RQQFVQHLQAIDEQFDIFSDI------------------RGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA----- 386 (420)
T ss_dssp HHHHHHHHHHHHHHHCCEEEE------------------EEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEES-----
T ss_pred HHHHHHHHHHHHhcCCCeEEE------------------EecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC-----
Confidence 67777776653 222111 235789999996421 12455666665456554432
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 483 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 483 ~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
.++.|||++.+ |+.+++++.|.+++++
T Consensus 387 ----------------------~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 387 ----------------------GADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp ----------------------STTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 14689999654 4455666666666653
No 154
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.89 E-value=7.7e-22 Score=208.66 Aligned_cols=278 Identities=12% Similarity=0.097 Sum_probs=177.4
Q ss_pred CCCC-chhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCC---
Q 009523 196 GRYG-NPTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--- 265 (532)
Q Consensus 196 ~R~~-~p~~~~Le~~lA~l~----ga--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~G--- 265 (532)
.+|+ .+...+|++++++++ +. ++.++++++++++.. +..++++||+|+++.|.|++....+.. ....|
T Consensus 92 ~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~ 169 (432)
T 3ei9_A 92 SGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFN 169 (432)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEE
T ss_pred cCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHH-cCCccccc
Confidence 3444 345678999999986 43 356666666788876 578889999999999999987655432 22222
Q ss_pred ------cEEEEeCCCCH----HHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc-
Q 009523 266 ------ITATVIDPADM----EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN- 331 (532)
Q Consensus 266 ------v~v~~vd~~dl----e~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~- 331 (532)
.++.+++.++. .++++ .+ ++++|++++|+||||.+.+ +++|+++|++||+++|+|++|+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~l~~--~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~ 246 (432)
T 3ei9_A 170 TDVQKYGNIEYMRCTPENGFFPDLST--VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSD 246 (432)
T ss_dssp TTTTEETTCEEEECCGGGTTSCCGGG--CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCS
T ss_pred ccccccCceEEeccCcccCCcCChhh--CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccC
Confidence 23444443321 12222 23 6899999999999999987 55677779999999999999874321
Q ss_pred ---cccc----ccCCcEEEECCccccCCCCCcEEEEEEeChHH--------HHHHHHHhhhcCCCccHHHHHHHHHh---
Q 009523 332 ---QKAL----SLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------VTQIRNLHHVLGGALNPNAAYLIIRG--- 393 (532)
Q Consensus 332 ---~~~l----~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l--------i~~l~~~~~~~G~~~~~~~a~l~l~~--- 393 (532)
.... ..+.++++.|+||.+|.+| ...|++++++++ ++.+...........++.....+...
T Consensus 247 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 325 (432)
T 3ei9_A 247 DNPRSIFEIPGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTP 325 (432)
T ss_dssp SCCSSGGGSTTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSH
T ss_pred CCCCChhhcCCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc
Confidence 1111 1245799999999998665 357899988877 67776654433444555544433332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCC
Q 009523 394 --MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIP 470 (532)
Q Consensus 394 --l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L-~~~ 470 (532)
.+.+....++..++++.+.+.|+++ ++... .| ..|.++++.+++. ....+...+ +..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~~~--~~~~~~~~ll~~~ 385 (432)
T 3ei9_A 326 EGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVY-GG----------------KNAPYVWVHFPNQ--SSWDVFAEILEKT 385 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEE-EC----------------SSSSEEEEECTTS--CHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHC-Cceec-CC----------------CcceEEEEECCCC--CHHHHHHHHHHHC
Confidence 3345556667778888899999876 33222 11 1356889998742 222333332 223
Q ss_pred ceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009523 471 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 521 (532)
Q Consensus 471 ~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dl 521 (532)
++.+..|..+. + ..+++||||++. +.+++
T Consensus 386 gv~v~~g~~f~----~-----------------~~~~~iRis~~~-~~e~l 414 (432)
T 3ei9_A 386 HVVTTPGSGFG----P-----------------GGEGFVRVSAFG-HRENI 414 (432)
T ss_dssp CEECEEGGGGC----G-----------------GGTTEEEEECCS-CHHHH
T ss_pred CEEEeCchHhC----C-----------------CCCCEEEEEecC-CHHHH
Confidence 66666664422 1 025799999975 33433
No 155
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.89 E-value=7.4e-22 Score=215.70 Aligned_cols=158 Identities=13% Similarity=0.144 Sum_probs=120.6
Q ss_pred HHHHHHHHHhhh----CC-------CcEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 203 TVVVEEKMSALE----GA-------ESTVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 203 ~~~Le~~lA~l~----ga-------~~~i~~sSG~~Ai~~al~a-----ll~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
...+++.+++++ +. ++++++++|++|+..++.+ ++++||+|+++.|+|.+.. ..+...|.
T Consensus 140 ~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~~~g~ 215 (533)
T 3f6t_A 140 LVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPELKDY 215 (533)
T ss_dssp CHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGGGGGS
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHHHcCC
Confidence 456677777665 33 3556666667999999988 7899999999999998754 34455677
Q ss_pred EEEEeCCC---------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHH---HHHHHHH-hCCCEEEEECCCCCCCc--
Q 009523 267 TATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFATPLN-- 331 (532)
Q Consensus 267 ~v~~vd~~---------dle~Le~al~~~~tklV~lesP~NptG~v~dl~---~I~~la~-~~gi~lIvDet~a~~~~-- 331 (532)
++..++.+ |+++|++++++ ++++|++++|+||||.+++.+ +|+++|+ ++|+++|+|++|+....
T Consensus 216 ~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~ 294 (533)
T 3f6t_A 216 ELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF 294 (533)
T ss_dssp EEEEECCCEETTTTSEECHHHHHHHSCT-TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC
T ss_pred eEEEEEecCCcccCCCCCHHHHHHHhCC-CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc
Confidence 77776542 79999999987 799999999999999999876 7788888 68999999999875322
Q ss_pred --ccccccCCcEEEECCccccCCCCCcEEEEEEeChH
Q 009523 332 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 366 (532)
Q Consensus 332 --~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~ 366 (532)
......+.++++.|+||.+|.+| .+.|+++++++
T Consensus 295 ~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~ 330 (533)
T 3f6t_A 295 KSIYSVVPYNTMLVYSYSKLFGCTG-WRLGVIALNEK 330 (533)
T ss_dssp CCHHHHSGGGEEEEEESHHHHTCGG-GCEEEEEEESS
T ss_pred cCHhhcCCCCEEEEecCcccCCCcc-cceEEEEECcH
Confidence 11112245699999999998666 35678887654
No 156
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.88 E-value=9.4e-21 Score=198.35 Aligned_cols=302 Identities=13% Similarity=0.089 Sum_probs=203.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~al-l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---- 274 (532)
.+...+|++++|+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|+++.+++.+
T Consensus 31 g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~ 106 (394)
T 1o69_A 31 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI----CYLKAKPVFIDCDETYN 106 (394)
T ss_dssp THHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH----HHTTCEEEEECBCTTSS
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH----HHcCCEEEEEEeCCCCC
Confidence 3779999999999999988999999999999999999 999999999999999976443 3468888888743
Q ss_pred -CHHHHHHhhcCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccccc---c-cCCcEEEECCc
Q 009523 275 -DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL---S-LGADLVLHSAT 347 (532)
Q Consensus 275 -dle~Le~al~~~--~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l---~-~gaDivv~S~s 347 (532)
|+++|++++++. ++++|++++ |+|...|+++|.++|+++|+++|+|++++.+...... . .++|+...|.+
T Consensus 107 ~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~ 183 (394)
T 1o69_A 107 IDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGN 183 (394)
T ss_dssp BCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCC
Confidence 789999998753 589999974 7899999999999999999999999999854322111 1 23566666779
Q ss_pred cccCCCCCcEEEEEEeC-hHHHHHHHHHhhhcC-C-------------CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-G-------------ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA 412 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G-~-------------~~~~~~a~l~l~~l~tl~~r~~~~~~~a~~la 412 (532)
|.++|.+ +|+++++ +++++.++....... . .+++..+.+++..++.+..++++..++++++.
T Consensus 184 K~l~~~~---~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~ 260 (394)
T 1o69_A 184 KIITTSG---GGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYK 260 (394)
T ss_dssp SSSCCSS---CEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---ceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998654 7899985 788888876532110 0 03455565555556667777788888899999
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--------------------HHHHHHHHHcCCCce
Q 009523 413 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--------------------TATIKFIDALKIPYI 472 (532)
Q Consensus 413 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~--------------------~~~~~~l~~L~~~~i 472 (532)
+.|++. + .+ ++... .. .....+++|.++.+. .....+.+.|...++
T Consensus 261 ~~L~~~--~-~~-~~~~~-~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI 326 (394)
T 1o69_A 261 EFLGEY--F-SF-LDELE-NS---------RSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQI 326 (394)
T ss_dssp HHHTTT--E-EC-CCCCT-TE---------ECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTC
T ss_pred HHhccc--c-cc-cCCCC-CC---------cceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCC
Confidence 988875 2 22 22110 00 001125777776321 245566777766677
Q ss_pred eecCCCcccccccCccccc--cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 473 APSFGGCESIVDQPAIMSY--WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 473 ~vs~G~~~sl~~~pa~~s~--~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.++.|... +.+.|..... ..++-.... ..+.+|+..+...+++.++.+.++|+
T Consensus 327 ~v~~~~~~-~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~t~edi~~~~~~l~ 381 (394)
T 1o69_A 327 ETRPLWKA-MHTQEVFKGAKAYLNGNSELF----FQKGICLPSGTAMSKDDVYEISKLIL 381 (394)
T ss_dssp CCBCCCCC-GGGCGGGTTCEEEECSHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cccccCCc-cccchhhhccCCCCChHHHHH----hcCeEEccCCCCCCHHHHHHHHHHHH
Confidence 77776431 1112211100 001111111 12456666677666666666666665
No 157
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.88 E-value=6e-22 Score=204.24 Aligned_cols=274 Identities=12% Similarity=0.034 Sum_probs=178.6
Q ss_pred hHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 202 TTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga~---~~i~~-sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
..+++++++++++|.+ +++++ ++|++|+..++.+++++||+|++..+.|.+.. +...++..| +++.++.+
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~ 126 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEAS 126 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEeccccc
Confidence 5678999999999985 44556 56679999999999999999988876654432 113344557 66666421
Q ss_pred ------CHHHHHHhhcCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCc
Q 009523 275 ------DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 347 (532)
Q Consensus 275 ------dle~Le~al~~~~tklV~lesP~NptG~v-~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~s 347 (532)
|.++++ +++ +|++|++++|+||||.+ .|+++| +|+++|+|++|+.+...-.+. ..|+++.|+|
T Consensus 127 ~~~~~~~~~~~~--i~~-~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~ 196 (362)
T 2c0r_A 127 NYMTLPKLQEIQ--LQD-NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-QFGLVYAGAQ 196 (362)
T ss_dssp TTCSCCCGGGCC--CCT-TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred ccccCCCHHHcc--cCC-CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh-HCcEEEEecc
Confidence 333332 565 79999999999999996 677776 899999999987653211122 1389999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHHH------------hhhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRNL------------HHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 409 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~~------------~~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a~ 409 (532)
|++|+.| .|++++++++++.++.. .....++.+....+.+..+++. +..+.++..++++
T Consensus 197 K~~g~~G---~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T 2c0r_A 197 KNLGPSG---VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKAS 273 (362)
T ss_dssp TTTCCSS---CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ccccCcC---cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9998665 68888888776554321 1122334555554544444443 3455666677888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
++.+.|++++.+..+..+ +.+ ..+++++|.+++ ......|.+.|...++.+..|..
T Consensus 274 ~l~~~L~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~-~~~~~~~~~~L~~~gi~~~~g~~---------- 329 (362)
T 2c0r_A 274 LIYDAIDQSGGFYRGCVD-----VDS--------RSDMNITFRLAS-EELEKEFVKASEQEGFVGLKGHR---------- 329 (362)
T ss_dssp HHHHHHHTSTTSSEESSC-----GGG--------BCSSEEEEECSC-HHHHHHHHHHHHHTTEESCBCCT----------
T ss_pred HHHHHHHHcCCccccCCC-----hHH--------cCCcEEEEEcCC-cchHHHHHHHHHHCCCeeccCCC----------
Confidence 888889887533112111 110 134678898864 24556777777666765543311
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
..+.||||++..+.++.++.+.++|+
T Consensus 330 ---------------~~~~iRis~~~~~~~e~i~~l~~~l~ 355 (362)
T 2c0r_A 330 ---------------SVGGLRASIYNAVPYESCEALVQFME 355 (362)
T ss_dssp ---------------TTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred ---------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 02469999996555555555555554
No 158
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=2.9e-21 Score=202.34 Aligned_cols=286 Identities=15% Similarity=0.090 Sum_probs=176.5
Q ss_pred HHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH-hcccCCcEEEEeCC-----CCHH
Q 009523 205 VVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP-----ADME 277 (532)
Q Consensus 205 ~Le~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~-~l~~~Gv~v~~vd~-----~dle 277 (532)
.+++.+++++|.+.. +++++|++|+..++.+++++||+|+++.++|++....... .....++.+..++. .|++
T Consensus 75 ~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 154 (417)
T 3n0l_A 75 LAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYE 154 (417)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHH
T ss_pred HHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHH
Confidence 344588999998655 8899999999999999999999999999999875432111 11223444555443 4899
Q ss_pred HHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-----ccccccCCcEEEECCccccCC
Q 009523 278 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGG 352 (532)
Q Consensus 278 ~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~gaDivv~S~sK~lgg 352 (532)
+|++++++.++++|++++|+| |.+.|+++|.++|++||+++|+|+++..+.. ..+.. ++|+++.|+||+++|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g 231 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTLRG 231 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTTCS
T ss_pred HHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCccccCC
Confidence 999999733699999887775 8899999999999999999999999643221 11222 479999999999966
Q ss_pred CCCcEEEEEEeC-hHHHHHHHHHhhhc-CCCccHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Q 009523 353 HNDVLAGSISGS-GKLVTQIRNLHHVL-GGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKILEAHPKVKRVH 425 (532)
Q Consensus 353 ~gd~~gG~lv~~-~~li~~l~~~~~~~-G~~~~~~~a~l~l~~l-----~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~ 425 (532)
+. +|+++++ +++++.++...... .+...+.....+...+ +.+..+.++..++++++.+.|++ .++. +.
T Consensus 232 ~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~-~~ 306 (417)
T 3n0l_A 232 PR---GGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFK-LV 306 (417)
T ss_dssp CS---CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCE-EG
T ss_pred CC---eeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCce-ec
Confidence 53 7999998 68888877654321 1122222211111111 33455666777888888998887 3442 21
Q ss_pred CCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCC
Q 009523 426 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 505 (532)
Q Consensus 426 ~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~ 505 (532)
.++ ..++++++.+.+.......+.+.|...++.++.+..... ..| ...
T Consensus 307 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~-~~~----------------~~~ 354 (417)
T 3n0l_A 307 SDG---------------TDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGE-IRS----------------PFI 354 (417)
T ss_dssp GGS---------------CSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTC-CSC----------------TTT
T ss_pred cCC---------------CCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCC-Ccc----------------cCC
Confidence 111 134578888753211223333344444666554321100 000 012
Q ss_pred CCeEEEEecC--------CCHHHHHHHHHHHHh
Q 009523 506 DNLVRFSFGV--------EDFEDLKADVLQALH 530 (532)
Q Consensus 506 ~~~IRlSvG~--------ed~~dli~dL~~AL~ 530 (532)
.+.+|+++.. ++.+.+++.|.++|+
T Consensus 355 ~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 355 TSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 4579998752 556666677766664
No 159
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.88 E-value=1.3e-21 Score=205.10 Aligned_cols=269 Identities=12% Similarity=0.098 Sum_probs=170.9
Q ss_pred HHHHHHHHhhhC-------CCcEEEeCCH-HHHHHHHHHHhccCCC----EEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 204 VVVEEKMSALEG-------AESTVIMASG-MSASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 204 ~~Le~~lA~l~g-------a~~~i~~sSG-~~Ai~~al~all~~Gd----~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
.+|++++|++++ .++.|++++| ++++.+++.+++++|| +|++++|+|.+.... ++..|.++..+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~----~~~~g~~~~~~ 146 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEE----TTYVRSGMYKW 146 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHH----HHTTCBTTEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHH----HHHcCCeEEEe
Confidence 789999999887 2345555555 5999999999999999 999999999976543 34456665555
Q ss_pred CCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccccc--ccCCcEEEECCccc
Q 009523 272 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL--SLGADLVLHSATKF 349 (532)
Q Consensus 272 d~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l--~~gaDivv~S~sK~ 349 (532)
+.+ .+.++ .+ ++++|++++|+||||.+++ +|++.++.+++++|+|++|..+. ..++ ..+.++++.|+||.
T Consensus 147 ~~d-~~~l~---~~-~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~-~~~l~~~~~~~i~~~S~SK~ 218 (391)
T 3bwn_A 147 EGD-AWGFD---KK-GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPH-YTPITRRQDHDIMLFTFSKI 218 (391)
T ss_dssp EEE-STTCC---CC-SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTT-TSCCCCCBCCSEEEEEHHHH
T ss_pred cCC-HHHcC---CC-CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCC-CCccccCCCCeEEEEechhh
Confidence 432 23332 23 6899999999999999997 45442233349999999987421 1112 34678999999999
Q ss_pred cCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH--------------HHHHHHHHHHHHHHHHHH
Q 009523 350 IGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--------------LHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 350 lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~t--------------l~~r~~~~~~~a~~la~~ 414 (532)
+|.+| .+.|++++ ++++++.+.........+.+...+.++...++. +....+...++++.+.+.
T Consensus 219 ~g~~G-lRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (391)
T 3bwn_A 219 TGHAG-SRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREV 297 (391)
T ss_dssp HSCGG-GCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCc-cceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 45688886 889998888766543444566655555444443 233344455777888889
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCC
Q 009523 415 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 494 (532)
Q Consensus 415 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~ 494 (532)
|+++|++. +..|. .+...+ ........|.++|+.++.. +....+ ++..++.+..|..+
T Consensus 298 L~~~~~~~-~~~p~-~~~~~f--~~~~~~~~g~~~~~~~~~~-~~~~~~---l~~~gV~v~pg~~f-------------- 355 (391)
T 3bwn_A 298 VKESDAFT-LPKYP-EAFCNY--FGKSLESYPAFAWLGTKEE-TDLVSE---LRRHKVMSRAGERC-------------- 355 (391)
T ss_dssp HHTCSSEE-CCCCC-CEEETT--TTEEECCCCSEEEEEESSS-CCHHHH---HHHTTEECEEGGGG--------------
T ss_pred HHhCCCcc-cccCC-cccccc--ccccCCCcceEEEecCCcH-HHHHHH---HHHCCEEEccCCCC--------------
Confidence 98876542 22221 000000 0000012355789999742 223333 33346777766543
Q ss_pred CHHHHHhcCCCCCeEEEEecC
Q 009523 495 SQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 495 ~~~~~~~~gi~~~~IRlSvG~ 515 (532)
|..+++||||++.
T Consensus 356 --------g~~~~~iRis~~~ 368 (391)
T 3bwn_A 356 --------GSDKKHVRVSMLS 368 (391)
T ss_dssp --------TCCTTEEEEESCS
T ss_pred --------CCCCCEEEEEecC
Confidence 1135799999996
No 160
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.88 E-value=4e-21 Score=200.85 Aligned_cols=212 Identities=12% Similarity=0.049 Sum_probs=143.7
Q ss_pred hHHHHHHHHHhhhC--------CCcEEE--eCCHHHHHHHHHHHhc---cCCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 202 TTVVVEEKMSALEG--------AESTVI--MASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 202 ~~~~Le~~lA~l~g--------a~~~i~--~sSG~~Ai~~al~all---~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
...+++++++++++ .++.++ +++|++|+.+++..+. ++||+|++++|+|.+.... ++..|.++
T Consensus 72 g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~ 147 (401)
T 7aat_A 72 GLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPI----FRDAGLQL 147 (401)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHH----HHHTTCEE
T ss_pred CCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHH----HHHcCCee
Confidence 35678888888764 345554 6777799998877654 8999999999999986544 44567777
Q ss_pred EEeCCC-------CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcccc--
Q 009523 269 TVIDPA-------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA-- 334 (532)
Q Consensus 269 ~~vd~~-------dle~Le~al~~--~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~~~-- 334 (532)
..++.+ |++++++.+++ .++++|++++|+||||.+++ +++|+++|+++|+++|+|++|........
T Consensus 148 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 227 (401)
T 7aat_A 148 QAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINR 227 (401)
T ss_dssp EEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHH
T ss_pred EeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccc
Confidence 776532 67766666642 26899999999999998876 67888899999999999999875432110
Q ss_pred ---------cccCCcEEEECCccccCCCCCcEEEEEEe---ChH----HHHHHHHHhhhcCCCccHHHHHHHHHhH----
Q 009523 335 ---------LSLGADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGM---- 394 (532)
Q Consensus 335 ---------l~~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~----li~~l~~~~~~~G~~~~~~~a~l~l~~l---- 394 (532)
......+++.|+||.+|.+|.. .|+++. +++ +.+.++..........+...+..+...+
T Consensus 228 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~R-iG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 306 (401)
T 7aat_A 228 DAWALRHFIEQGIDVVLSQSYAKNMGLYGER-AGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPE 306 (401)
T ss_dssp HTHHHHHHHHTTCCCEEEEECTTTSCCGGGC-EEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHH
T ss_pred cHHHHHHHHhcCCcEEEEecCCcccccccCc-eEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHH
Confidence 1124568999999999977744 566654 555 3444444433333333344433332222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 395 ------KTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 395 ------~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
+.+....++..++++++.+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 307 LRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223334455567777888888765
No 161
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=2.8e-22 Score=205.91 Aligned_cols=274 Identities=11% Similarity=0.033 Sum_probs=181.6
Q ss_pred hHHHHHHHHHhhhCCC---cEEEeCCH-HHHHHHHHHHhccC---CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 202 TTVVVEEKMSALEGAE---STVIMASG-MSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga~---~~i~~sSG-~~Ai~~al~all~~---Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
..+++++++++++|.+ ++++++++ ++|+.+++.+++.+ ||+|+++.+.|... ..+...| ++++++.
T Consensus 49 ~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 49 VHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeecc
Confidence 5788999999999975 35556666 79999999998865 56677766555431 2245568 8777753
Q ss_pred -----CCHHHHHH-hhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCc
Q 009523 274 -----ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 347 (532)
Q Consensus 274 -----~dle~Le~-al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~s 347 (532)
.|+++|++ ++++ +|++|++++|+||||.+.| ++++++|+++|+|++++.+.....+. ..|+++.|+|
T Consensus 123 ~~~~~~d~~~l~~~~i~~-~~k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~s 195 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNE-NDAYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLKVN-QFGMIYAGAQ 195 (360)
T ss_dssp GGGTSCSCCCGGGCCCCT-TEEEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred cccCcCCccchHhhccCC-CCCEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcCcc-cCCEEEEEcc
Confidence 36788888 8876 7999999999999999987 34448999999999987653211121 1289999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHHHh------------hhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRNLH------------HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 409 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~~~------------~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a~ 409 (532)
|++|+.| .|+++++++++++++... ....++.+....+.+..+++. +....++..++++
T Consensus 196 K~~~~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 272 (360)
T 1w23_A 196 KNLGPSG---VTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAK 272 (360)
T ss_dssp TTTSCTT---CEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCCCC---cEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9998665 588888887776554321 011123444444444444443 3445666678888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccc
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 489 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~ 489 (532)
++.+.|++.+++..+.. .|.. ..+.+++|.+++ ......+++.|...++.+..|..
T Consensus 273 ~l~~~L~~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~~~~~---------- 328 (360)
T 1w23_A 273 IIYDTIDESNGFYVGHA-----EKGS--------RSLMNVTFNLRN-EELNQQFLAKAKEQGFVGLNGHR---------- 328 (360)
T ss_dssp HHHHHHHTTTTSSEESS-----CGGG--------BCSSEEEEECSS-HHHHHHHHHHHHHTTEESCBCCT----------
T ss_pred HHHHHHHHccCcccccC-----Cchh--------ccCcEEEEEcCC-CccHHHHHHHHHHCCeeeecCCC----------
Confidence 89999988764311110 0110 124589999874 24456777777666666544311
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009523 490 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 530 (532)
Q Consensus 490 s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~ 530 (532)
.++.||||++..++++.++.+.++|+
T Consensus 329 ---------------~~~~iRis~~~~~~~~~i~~~~~~l~ 354 (360)
T 1w23_A 329 ---------------SVGGCRASIYNAVPIDACIALRELMI 354 (360)
T ss_dssp ---------------TTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred ---------------CCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 14689999997665655666655554
No 162
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.88 E-value=6.9e-21 Score=203.22 Aligned_cols=287 Identities=12% Similarity=-0.051 Sum_probs=189.3
Q ss_pred HHHHHHHHHhhhCCC--c-----EEEeCCHHHHHHHHHHHhcc--------CC-----CEEEEcCCCCcchHHHHHHhcc
Q 009523 203 TVVVEEKMSALEGAE--S-----TVIMASGMSASTVMLLALVP--------AG-----GHIVTTTDCYRKTRIFIETVLP 262 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~--~-----~i~~sSG~~Ai~~al~all~--------~G-----d~VIv~~~~y~~t~~~~~~~l~ 262 (532)
.+++++.+++++|.+ . ++++++|++|+.+++.++.. +| ++|++++ .|.... ..+.
T Consensus 83 ~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~----~~~~ 157 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWH----KFAR 157 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHH----HHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHH----HHHH
Confidence 345566778899874 2 78888999999999887754 55 5999998 776543 3455
Q ss_pred cCCcEEEEeCCC------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC------CCEEEEECCCCCCC
Q 009523 263 KMGITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPL 330 (532)
Q Consensus 263 ~~Gv~v~~vd~~------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~------gi~lIvDet~a~~~ 330 (532)
..|++++.++.+ |+++|++++++ +|++|++++|+||||.+.|+++|+++|+++ |+++++|++|+.+.
T Consensus 158 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~ 236 (452)
T 2dgk_A 158 YWDVELREIPMRPGQLFMDPKRMIEACDE-NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236 (452)
T ss_dssp HTTCEEEECCCBTTBCSCCHHHHHHHCCT-TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HcCceEEEEecCCCCCeECHHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHH
Confidence 678999888753 79999999987 699999999999999999999999999995 99999999987643
Q ss_pred c---cc--cc---ccCCcEEEECCccccCCCCCcEEEEEEeCh-HHH-HHHHHHhhhcC----------CCc--cHHHHH
Q 009523 331 N---QK--AL---SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLV-TQIRNLHHVLG----------GAL--NPNAAY 388 (532)
Q Consensus 331 ~---~~--~l---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li-~~l~~~~~~~G----------~~~--~~~~a~ 388 (532)
. .. +. ..++|+++.|+||++.++. ..|+++.++ +++ +.+.......+ ... .....|
T Consensus 237 ~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 314 (452)
T 2dgk_A 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPL--GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 314 (452)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCS--SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHH
T ss_pred HHhhCccchhhcCCCCCcEEEECcccccCCCC--CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHH
Confidence 1 11 11 2378999999999886554 267777754 333 33321111111 111 233444
Q ss_pred HHHHh--HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH---HHHHHH
Q 009523 389 LIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL---TATIKF 463 (532)
Q Consensus 389 l~l~~--l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~---~~~~~~ 463 (532)
.+++. .+.+..++++..++++++.+.|++.+++..+ .|+.+. ...+++.|.+++.. .....+
T Consensus 315 aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~------------~~~~~v~f~~~~~~~~~~~~~~l 381 (452)
T 2dgk_A 315 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI-CTGRPD------------EGIPAVCFKLKDGEDPGYTLYDL 381 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-EECCTT------------TBSSEEEEEECTTCCCSCCHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCCCCC------------CCeEEEEEEecCcccccCCHHHH
Confidence 44443 3456677788889999999999998876433 332110 13568999987421 112455
Q ss_pred HHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 464 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 464 l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
.+.|...++.++. + ..|... -..+.+|+|++.. +.+.++++|+++++
T Consensus 382 ~~~L~~~Gi~v~~--~----~~~~~~--------------~~~~~lRis~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 382 SERLRLRGWQVPA--F----TLGGEA--------------TDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp HHHHHHTTCBCCE--E----ECSTTC--------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeeee--e----eCCccc--------------CCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 5665544443321 1 111100 0245899999974 45555666655544
No 163
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.88 E-value=4.8e-21 Score=203.13 Aligned_cols=292 Identities=14% Similarity=0.095 Sum_probs=192.1
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhC--C-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhccc---
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEG--A-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPK--- 263 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~g--a-~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l~~--- 263 (532)
.|.+.++.++...+|+++|+++++ . +++++++||++|+..+++.+ ..++++||+.++.|++...........
T Consensus 77 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 156 (439)
T 3dxv_A 77 GATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQ 156 (439)
T ss_dssp CSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC------
T ss_pred CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCch
Confidence 455677888999999999999984 4 57889999999999999875 346788888899987754322111100
Q ss_pred --------CCcEEEEeCCC----------CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCC
Q 009523 264 --------MGITATVIDPA----------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGA 318 (532)
Q Consensus 264 --------~Gv~v~~vd~~----------dle~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi 318 (532)
....+..++.. |+++|+++++ +.++++|++++++|++|.+.+ +++|.++|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~ 236 (439)
T 3dxv_A 157 ADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGI 236 (439)
T ss_dssp -------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred hhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 00012223333 5899999993 336999999999999999998 9999999999999
Q ss_pred EEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHH
Q 009523 319 IVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR 392 (532)
Q Consensus 319 ~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~ 392 (532)
++|+||+|... ..........|++ |++|.+++ | ...|++++++++++.+......... .++..+..++.
T Consensus 237 ~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~a 311 (439)
T 3dxv_A 237 LVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-G-LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLA 311 (439)
T ss_dssp EEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-T-SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHH
T ss_pred EEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-C-cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHH
Confidence 99999998632 1122223446776 78999996 4 3678999998888776543222223 56776666666
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc-------CCHHH
Q 009523 393 GMKTLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-------GDLTA 459 (532)
Q Consensus 393 ~l~tl~--~r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~-------g~~~~ 459 (532)
.++.+. ..+++..++.+++.+.|++ ++.+..+ ++.|.++++++. .....
T Consensus 312 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~ 373 (439)
T 3dxv_A 312 VLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI------------------RGRGLACGMELVCDRQSREPARAE 373 (439)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEEEETTTTEECHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCCHHH
Confidence 665432 2344455556666665544 3433222 235778999883 12344
Q ss_pred HHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009523 460 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 531 (532)
Q Consensus 460 ~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~~ 531 (532)
...+.+.+...++.+..|+ ..++.+||+++.. +.+++++.|.+++++
T Consensus 374 ~~~~~~~l~~~Gv~v~~~~-------------------------~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 374 TAKLIYRAYQLGLVVYYVG-------------------------MNGNVLEFTPPLTITETDIHKALDLLDRAFSE 424 (439)
T ss_dssp HHHHHHHHHHHTEECEEES-------------------------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCcEEeecC-------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5566666654455544331 1247899987654 345556666666543
No 164
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.88 E-value=6.5e-21 Score=199.94 Aligned_cols=215 Identities=14% Similarity=0.089 Sum_probs=149.5
Q ss_pred CchhHHHHHHHHHhhh-CC-------CcEEE--eCCHHHHHHHHHH--HhccCC-----CEEEEcCCCCcchHHHHHHhc
Q 009523 199 GNPTTVVVEEKMSALE-GA-------ESTVI--MASGMSASTVMLL--ALVPAG-----GHIVTTTDCYRKTRIFIETVL 261 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~-ga-------~~~i~--~sSG~~Ai~~al~--all~~G-----d~VIv~~~~y~~t~~~~~~~l 261 (532)
+.+...+|++++++++ +. +++++ +++|++|+.+++. .++.+| |+|+++.|+|++... .+
T Consensus 72 ~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~----~~ 147 (412)
T 1ajs_A 72 PILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG----VF 147 (412)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH----HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH----HH
Confidence 3445678999999988 42 56777 8888899999854 556899 999999999998553 34
Q ss_pred ccCCcE-EEEeCC---C----CHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCC
Q 009523 262 PKMGIT-ATVIDP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 262 ~~~Gv~-v~~vd~---~----dle~Le~al~~~--~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~ 328 (532)
...|.+ +..++. + |+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..
T Consensus 148 ~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~ 227 (412)
T 1ajs_A 148 TTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG 227 (412)
T ss_dssp HHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred HHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 456777 766654 2 789999988642 5789989999999999987 55799999999999999999765
Q ss_pred CCcc----c--c---cc--cCCcEEEECCccccCCCCCcEEEEEEe---ChHH----HHHHHHHhhhcCCCccHHHHHHH
Q 009523 329 PLNQ----K--A---LS--LGADLVLHSATKFIGGHNDVLAGSISG---SGKL----VTQIRNLHHVLGGALNPNAAYLI 390 (532)
Q Consensus 329 ~~~~----~--~---l~--~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~l----i~~l~~~~~~~G~~~~~~~a~l~ 390 (532)
.... . + +. ...++++.|+||.+|++| ...|++++ ++++ ++.++..........++..++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 306 (412)
T 1ajs_A 228 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYN-ERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIV 306 (412)
T ss_dssp TTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH
T ss_pred ccCCcccccchHHHHHhccCCcEEEEEecccccCCCC-cceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHH
Confidence 4221 1 1 11 123488999999999866 35688887 7764 44444422222222344444444
Q ss_pred HHhHH----------HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 391 IRGMK----------TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 391 l~~l~----------tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
...++ .+....++..++.+.+.+.|++.
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1ajs_A 307 ARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEAL 344 (412)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44443 23334445556777788888775
No 165
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.88 E-value=7.2e-21 Score=203.07 Aligned_cols=224 Identities=13% Similarity=0.107 Sum_probs=154.0
Q ss_pred CCCCCCCCchhHHHHHHHHHhhh-CCC-------cEEE--eCCHHHHHHH--HHHHhccCCCEEEEcCCCCcchHHHHHH
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALE-GAE-------STVI--MASGMSASTV--MLLALVPAGGHIVTTTDCYRKTRIFIET 259 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~-ga~-------~~i~--~sSG~~Ai~~--al~all~~Gd~VIv~~~~y~~t~~~~~~ 259 (532)
.+.|. +.+...++++++++++ |.+ +.++ +++|++|+.+ .+.+++.+||+|++++|+|.+....+..
T Consensus 87 ~~~Y~--~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~ 164 (448)
T 3meb_A 87 NKEYP--PVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDK 164 (448)
T ss_dssp CCSCC--CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHH
T ss_pred CCCCC--CCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHh
Confidence 34444 3345678999999987 653 5666 7788899987 5567788999999999999987655542
Q ss_pred hcccCCcEEEEeCC---C-----CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccCHH---HHHHHHHhCCCEEEEECCC
Q 009523 260 VLPKMGITATVIDP---A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 260 ~l~~~Gv~v~~vd~---~-----dle~Le~al~~--~~tklV~lesP~NptG~v~dl~---~I~~la~~~gi~lIvDet~ 326 (532)
.++..|.++..++. + |+++|++++++ .++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|
T Consensus 165 ~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay 244 (448)
T 3meb_A 165 VFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY 244 (448)
T ss_dssp HHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred hHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 23366777777654 2 78999999873 2588999999999999999854 5999999999999999997
Q ss_pred CCCCccc------cc----ccC-CcEEEECCccccCCCCCcEEEEE--Ee---------Ch----HHHHHHHHHhhhcCC
Q 009523 327 ATPLNQK------AL----SLG-ADLVLHSATKFIGGHNDVLAGSI--SG---------SG----KLVTQIRNLHHVLGG 380 (532)
Q Consensus 327 a~~~~~~------~l----~~g-aDivv~S~sK~lgg~gd~~gG~l--v~---------~~----~li~~l~~~~~~~G~ 380 (532)
....... .. ..+ ..+++.|+||.+|.+|. ..|++ ++ ++ ++++.+....+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 323 (448)
T 3meb_A 245 QGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGE-RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWS 323 (448)
T ss_dssp TTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG-CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccc-cceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccC
Confidence 7543211 01 123 34789999999997764 35665 54 34 455555554443333
Q ss_pred CccHHHHHHHHHhHH----------HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 381 ALNPNAAYLIIRGMK----------TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~----------tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
..+...++.+...++ .+....++..++++.+.+.|+++
T Consensus 324 ~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 324 MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445555544443332 23444455567777888888765
No 166
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.80 E-value=3e-24 Score=224.32 Aligned_cols=284 Identities=15% Similarity=0.113 Sum_probs=183.1
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-
Q 009523 203 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 273 (532)
Q Consensus 203 ~~~Le~~lA~l~----g----a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~- 273 (532)
..++++++++++ | .++++++++|++|+.+++.+++++||+|+++.+.|++... .+...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~ 143 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFAR----SVRLNNRKLVSNSLK 143 (392)
Confidence 667777777764 3 2455666677799999999999999999999999998653 34455666665543
Q ss_pred -------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc-----cc--c-
Q 009523 274 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA--L- 335 (532)
Q Consensus 274 -------~dle~Le~al~~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~-----~~--l- 335 (532)
.|+++|++++++.++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .. +
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (392)
T 3b1d_A 144 EENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVS 223 (392)
Confidence 36888999887336899999999999999987 889999999999999999997653210 11 1
Q ss_pred c--cCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHHhhhcC-CCccHHHHHHHHHhHHH----HHHHHHHHHHH
Q 009523 336 S--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLG-GALNPNAAYLIIRGMKT----LHLRVQQQNST 407 (532)
Q Consensus 336 ~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G-~~~~~~~a~l~l~~l~t----l~~r~~~~~~~ 407 (532)
. .+.++++.|+||.++.+| ...|++++++ ++++.++......+ ...++..++.+...++. +....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (392)
T 3b1d_A 224 PDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEEN 302 (392)
Confidence 1 345689999999997554 4578888764 58888776554442 12344444444444432 22233344455
Q ss_pred HHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCccccccc
Q 009523 408 ALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQ 485 (532)
Q Consensus 408 a~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~-~~~i~vs~G~~~sl~~~ 485 (532)
++.+.+.|++ +|++..+ .| ..+.+++++++........+.+.|. ..++.+..|..+.
T Consensus 303 ~~~l~~~l~~~~~~~~~~-~~----------------~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---- 361 (392)
T 3b1d_A 303 IQFAVEYFAQEAPRLKVM-KP----------------QGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG---- 361 (392)
Confidence 6666666665 3443211 11 0233446777531123455666663 5576666654321
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009523 486 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 529 (532)
Q Consensus 486 pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e--d~~dli~dL~~AL 529 (532)
+ ..++++||+++.. +.++.++.|.++|
T Consensus 362 ~-----------------~~~~~iRi~~~~~~e~i~~~l~~l~~~l 390 (392)
T 3b1d_A 362 S-----------------EGELHARLNIAAPKSLVEEICKRIVCCL 390 (392)
Confidence 0 1256899999863 3444455555544
No 167
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.87 E-value=1.9e-21 Score=203.00 Aligned_cols=292 Identities=15% Similarity=0.107 Sum_probs=187.1
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCC--cEEEEe
Q 009523 199 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVI 271 (532)
Q Consensus 199 ~~p~~~~Le----~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~G--v~v~~v 271 (532)
+++...+++ +++++++|.+.. +++++|++|+..++.+++++||+|+++.+.|+++.... ..+...| +++..+
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 141 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHG-SPVNFSGVQYNFVAY 141 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTT-CTTSHHHHHSEEEEE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhccc-chhhhccceeEEEec
Confidence 345556665 699999998765 45789999999999999999999999999998753210 0011112 355555
Q ss_pred CC------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc---ccccc-cCCcE
Q 009523 272 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKALS-LGADL 341 (532)
Q Consensus 272 d~------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~---~~~l~-~gaDi 341 (532)
+. .|+++|++++++.++++|++ +|+|. |...|+++|.++|+++|+++|+|++++.+.. ..+.. .+.|+
T Consensus 142 ~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di 219 (405)
T 2vi8_A 142 GVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHF 219 (405)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSE
T ss_pred ccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCE
Confidence 42 37999999987435889888 55554 5677899999999999999999999873211 11111 15799
Q ss_pred EEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcC-CCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHH
Q 009523 342 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKIL 415 (532)
Q Consensus 342 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G-~~~~~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~~L 415 (532)
++.|+||+++|+. ||++++++++++.++.....+. +..++.....+...++ .+....++..++++++.+.|
T Consensus 220 ~~~s~sK~~~g~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 296 (405)
T 2vi8_A 220 VTTTTHKTLRGPR---GGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASAL 296 (405)
T ss_dssp EEEESSSTTCCCS---CEEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCC---CeEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998543 4999999888888776542221 2223333222222332 33455666778888888888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCC
Q 009523 416 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 495 (532)
Q Consensus 416 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~ 495 (532)
++. ++. +..|. +.+.++++.++........+.+.|...++.+..|.. |. |. ..
T Consensus 297 ~~~-g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~------~~---~~-~~ 349 (405)
T 2vi8_A 297 QNE-GFT-LVSGG---------------TDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTI------PY---DP-ES 349 (405)
T ss_dssp HHT-TCE-EGGGS---------------CSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECC------TT---CS-SC
T ss_pred HhC-CCe-EecCC---------------CCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcC------cc---cc-CC
Confidence 876 442 32221 136688998863101233444555445666665532 10 00 00
Q ss_pred HHHHHhcCCCCCeEEEEecC--------CCHHHHHHHHHHHHh
Q 009523 496 QSERLKYGIMDNLVRFSFGV--------EDFEDLKADVLQALH 530 (532)
Q Consensus 496 ~~~~~~~gi~~~~IRlSvG~--------ed~~dli~dL~~AL~ 530 (532)
...++.+|||++. ++.+.+++.|.++++
T Consensus 350 -------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 385 (405)
T 2vi8_A 350 -------PFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK 385 (405)
T ss_dssp -------TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred -------CCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHh
Confidence 0124679999994 455666666666664
No 168
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.87 E-value=9.9e-21 Score=200.11 Aligned_cols=285 Identities=14% Similarity=0.089 Sum_probs=182.9
Q ss_pred CCCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhc---c----CCCEEEEcCCCCcchHHHHHHhcc---
Q 009523 195 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETVLP--- 262 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all---~----~Gd~VIv~~~~y~~t~~~~~~~l~--- 262 (532)
+++|.++...+++++++++++ .+++++++||++|+..+++.+. + |||+||+.++.|++..........
T Consensus 80 ~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~ 159 (429)
T 1s0a_A 80 FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDN 159 (429)
T ss_dssp CSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTT
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCch
Confidence 456778888999999999996 4678888899999999988653 2 699999999999874322211110
Q ss_pred ---------cCCcEEEEeC---------CCCHHHHHHhhcC--CCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCC
Q 009523 263 ---------KMGITATVID---------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKG 317 (532)
Q Consensus 263 ---------~~Gv~v~~vd---------~~dle~Le~al~~--~~tklV~lesP-~NptG~v~d----l~~I~~la~~~g 317 (532)
..++....++ ..|+++|++++++ .++++|+++.+ +||+|.+.+ +++|.++|++||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~ 239 (429)
T 1s0a_A 160 SMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREG 239 (429)
T ss_dssp TTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHT
T ss_pred hhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 0133333333 1478999998872 26888888766 799998887 999999999999
Q ss_pred CEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh--h-hcC--CCccHHH
Q 009523 318 AIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--H-VLG--GALNPNA 386 (532)
Q Consensus 318 i~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~-~~G--~~~~~~~ 386 (532)
+++|+||+|.... .........|++ |++|.++++ -...|++++++++++.+.... . ..+ ...++..
T Consensus 240 ~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~G-~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~ 316 (429)
T 1s0a_A 240 ILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLA 316 (429)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTS-SSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHH
T ss_pred CEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccCC-CccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHH
Confidence 9999999986321 122233456776 578999863 134788889998888876521 0 011 2235666
Q ss_pred HHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhC---CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009523 387 AYLIIRGMKTLH--LRVQQQNSTALRMAKILEAH---PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 461 (532)
Q Consensus 387 a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~---p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~ 461 (532)
+..+...++.+. ...++..++.+++.+.|++. |.+..+ .+.|.++++++++. ....
T Consensus 317 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------~~~g~~~~~~~~~~-~~~~ 377 (429)
T 1s0a_A 317 CAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADV------------------RVLGAIGVVETTHP-VNMA 377 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEEEE------------------EEETTEEEEEESSC-BCHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEEE------------------EEeeEEEEEEECCc-ccHH
Confidence 665555665432 23445556677777777653 222111 12467899998742 1233
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 529 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL 529 (532)
.+.+.|...++.+..+ .+.||||++...+++.++.+.++|
T Consensus 378 ~l~~~l~~~Gi~v~~~----------------------------~~~iRis~~~~~t~e~i~~~~~~l 417 (429)
T 1s0a_A 378 ALQKFFVEQGVWIRPF----------------------------GKLIYLMPPYIILPQQLQRLTAAV 417 (429)
T ss_dssp HHHHHHHHTTEECCCB----------------------------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEecc----------------------------CCEEEEECCCCCCHHHHHHHHHHH
Confidence 4555554345544310 368999987654444444444444
No 169
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.87 E-value=5.3e-21 Score=204.11 Aligned_cols=253 Identities=17% Similarity=0.185 Sum_probs=167.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhcc----CCCE---EEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----AGGH---IVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~----~Gd~---VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
..+...+|+++|+++++.+++++++||++|+.+++.++++ +||+ ||++.+.|..+... +...|.++..+
T Consensus 74 ~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~----~~~~g~~~~~~ 149 (467)
T 1ax4_A 74 GSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAH----VELNGCKAINI 149 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHH----HHHTTCEEEEC
T ss_pred cCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHH----HhccCCceecc
Confidence 3467889999999999998899999999999999999988 9998 98885444443322 33345555543
Q ss_pred C---------------CCCHHHHHHhhcC---CCeeEEEEeCCCCCC-CcccC---HHHHHHHHHhCCCEEEEECCCCC-
Q 009523 272 D---------------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT- 328 (532)
Q Consensus 272 d---------------~~dle~Le~al~~---~~tklV~lesP~Npt-G~v~d---l~~I~~la~~~gi~lIvDet~a~- 328 (532)
+ ..|+++|++++++ .++++|++++|+||+ |.+++ +++|+++|++||+++|+|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~ 229 (467)
T 1ax4_A 150 VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCE 229 (467)
T ss_dssp BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhh
Confidence 1 1378999999974 259999999999999 88766 57899999999999999998442
Q ss_pred ----------CC-cccccc------cCCcEEEECCccccCCCCCcEEEEEEeC-h-HHHHHHHHHhhhcCC-----CccH
Q 009523 329 ----------PL-NQKALS------LGADLVLHSATKFIGGHNDVLAGSISGS-G-KLVTQIRNLHHVLGG-----ALNP 384 (532)
Q Consensus 329 ----------~~-~~~~l~------~gaDivv~S~sK~lgg~gd~~gG~lv~~-~-~li~~l~~~~~~~G~-----~~~~ 384 (532)
.+ ...... ..+|+++.|+||.++.+ +||+++++ + ++++.+.......++ ..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAG 306 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCH
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHHHhhccccccccccCCccc
Confidence 11 111111 24789999999999865 36888887 7 888877654332111 1222
Q ss_pred HHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEE-------EcC
Q 009523 385 NAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE-------VDG 455 (532)
Q Consensus 385 ~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~-------l~g 455 (532)
.....+..+++... .++++..++++.+.+.|++ +++. +..|. .|..+++. ++.
T Consensus 307 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~ 368 (467)
T 1ax4_A 307 RDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE-AGIP-IQYPT----------------GGHAVFVDCKKLVPQIPG 368 (467)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-TTCC-BCSSC----------------CSSEEEEESTTTCTTSCG
T ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh-CCCC-cccCC----------------CceEEEEehhhhcccccc
Confidence 22221122343321 2455555777888888877 3432 11121 34567777 332
Q ss_pred CHHHHHHHHHHc-CCCceeecC
Q 009523 456 DLTATIKFIDAL-KIPYIAPSF 476 (532)
Q Consensus 456 ~~~~~~~~l~~L-~~~~i~vs~ 476 (532)
.......+.+.| ...++.++.
T Consensus 369 ~~~~~~~l~~~L~~~~gv~v~~ 390 (467)
T 1ax4_A 369 DQFPAQAVINALYLESGVRAVE 390 (467)
T ss_dssp GGCHHHHHHHHHHHHHCEECEE
T ss_pred CCCCHHHHHHHHHHhcCceeee
Confidence 112345666666 555777766
No 170
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.87 E-value=1e-20 Score=198.11 Aligned_cols=255 Identities=12% Similarity=0.083 Sum_probs=162.2
Q ss_pred chhHHHHHHHHHhh--hC-C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE-EEEeCC
Q 009523 200 NPTTVVVEEKMSAL--EG-A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDP 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l--~g-a--~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~-v~~vd~ 273 (532)
.+...+|+++++++ .| . +++++++++++++..++ .++++||+|+++.|+|++.... +...|.+ +..++.
T Consensus 74 ~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~ 148 (400)
T 3asa_A 74 DFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLL-SFFGPNQTVAIQDPSYPAYLDI----ARLTGAKEIIALPC 148 (400)
T ss_dssp TTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHH-HHHCSSCEEEEEESCCHHHHHH----HHHTTCSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHH-HHcCCCCEEEECCCCcHHHHHH----HHHcCCcceEeccc
Confidence 34567899999999 46 3 45677777779998865 5568999999999999886533 3445776 777764
Q ss_pred CCHHHHHHhhcC-CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCC-----ccccccc----CCc
Q 009523 274 ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSL----GAD 340 (532)
Q Consensus 274 ~dle~Le~al~~-~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~-----~~~~l~~----gaD 340 (532)
++.+.+...+++ .++++|++++|+||||.++| +++|+++|+++|+++|+|++|.... ......+ +.+
T Consensus 149 ~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (400)
T 3asa_A 149 LQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCA 228 (400)
T ss_dssp CGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTE
T ss_pred chhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCce
Confidence 321111111111 26899999999999999998 5578889999999999999987421 1112222 245
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHH-------HHHHHHHh-hhcCCCccHHHHHHHHHhHHH--HHHHHHHHHHHHHH
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKL-------VTQIRNLH-HVLGGALNPNAAYLIIRGMKT--LHLRVQQQNSTALR 410 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~l-------i~~l~~~~-~~~G~~~~~~~a~l~l~~l~t--l~~r~~~~~~~a~~ 410 (532)
+++.|+||.+|.+| ...|++++++++ ++.+.... ....++.++.....+...++. +....++..++++.
T Consensus 229 i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 307 (400)
T 3asa_A 229 IEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDL 307 (400)
T ss_dssp EEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred EEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 89999999998655 457889988877 66554322 111223455555544445543 23344555677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEE-EcCCHHHHHHHHHHcC-CCceeecCCCc
Q 009523 411 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE-VDGDLTATIKFIDALK-IPYIAPSFGGC 479 (532)
Q Consensus 411 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~-l~g~~~~~~~~l~~L~-~~~i~vs~G~~ 479 (532)
+.+.|++. ++. +..|. .|.++++. ++.+. ....+.+.|. ..++.+..|..
T Consensus 308 l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~~l~~~~gv~v~~g~~ 359 (400)
T 3asa_A 308 LRKALLAT-GFE-VFGGE----------------HAPYLWVKPTQANI-SDRDLFDFFLREYHIAITPGIG 359 (400)
T ss_dssp HHHHHHHT-TCE-EEECS----------------SSSEEEEECCCTTC-CTTTHHHHHHHHHSEECEEGGG
T ss_pred HHHHHHHC-CCe-eeCCC----------------CceEEEEeccCCCC-CHHHHHHHHHHhCCEEEeChhH
Confidence 88888876 443 22121 35688998 76321 1122333332 23666666643
No 171
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.87 E-value=4.9e-21 Score=200.58 Aligned_cols=252 Identities=16% Similarity=0.142 Sum_probs=158.6
Q ss_pred hHHHHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH-hcccCCcEEEEe--C---CC
Q 009523 202 TTVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVI--D---PA 274 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~-~l~~~Gv~v~~v--d---~~ 274 (532)
..+.+++.+++++|.+.. +++++|++|+..++.+++++||+|+++.+.|+++...... .+...++....+ + ..
T Consensus 77 ~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (420)
T 3gbx_A 77 VEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKI 156 (420)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSC
T ss_pred HHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCc
Confidence 344456899999998654 5689999999999999999999999999999874311111 111112232222 2 25
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-----ccccccCCcEEEECCccc
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKF 349 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~gaDivv~S~sK~ 349 (532)
|+++|+++++++++++|++++|+|| .+.|+++|.++|++||+++|+|++++.+.. ..... .+|+++.|+||+
T Consensus 157 d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~ 233 (420)
T 3gbx_A 157 DYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKT 233 (420)
T ss_dssp CHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGG
T ss_pred CHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccC
Confidence 8999999997645899999999986 478999999999999999999999754321 12222 489999999999
Q ss_pred cCCCCCcEEEEEEeCh---HHHHHHHHHhhh--cCCCccHHHHHH--HH-HhH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 350 IGGHNDVLAGSISGSG---KLVTQIRNLHHV--LGGALNPNAAYL--II-RGM-KTLHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 350 lgg~gd~~gG~lv~~~---~li~~l~~~~~~--~G~~~~~~~a~l--~l-~~l-~tl~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
++|+. ||++++++ ++.+.++..... .+....+..+.+ ++ ..+ +.+..+.++..++++++.+.|.+. +
T Consensus 234 ~~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 309 (420)
T 3gbx_A 234 LAGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-G 309 (420)
T ss_dssp GCSCS---CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred CCCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 97553 69999987 777776654322 222222222221 11 111 334555667778888888888873 3
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009523 421 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 476 (532)
Q Consensus 421 v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~ 476 (532)
+. +..++ ..++++++.++........+.+.|...++.+..
T Consensus 310 ~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 349 (420)
T 3gbx_A 310 YK-VVSGG---------------TENHLFLLDLVDKNLTGKEADAALGRANITVNK 349 (420)
T ss_dssp CE-EGGGS---------------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEE
T ss_pred Ce-eccCC---------------CCCeEEEEEcCCCCCCHHHHHHHHHHCCcEecc
Confidence 32 21111 135688888753111223334444444555544
No 172
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.87 E-value=1e-20 Score=199.09 Aligned_cols=286 Identities=15% Similarity=0.176 Sum_probs=183.7
Q ss_pred CCCCchhHHHHHHHHHhhh-C-C-CcEEEeCCHHHHHHHHHH---HhccCCCEEEEcCCCCcchHHHHHHhcc-------
Q 009523 196 GRYGNPTTVVVEEKMSALE-G-A-ESTVIMASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLP------- 262 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~-g-a-~~~i~~sSG~~Ai~~al~---all~~Gd~VIv~~~~y~~t~~~~~~~l~------- 262 (532)
.++.++...+|+++|++++ | . ++++++++|++|+.+++. .+.++| +|++.++.|++..........
T Consensus 79 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~ 157 (426)
T 1sff_A 79 QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSA 157 (426)
T ss_dssp TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTT
T ss_pred cccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCcccccc
Confidence 4456788999999999999 5 3 457778888899999988 667776 899999999875432212111
Q ss_pred cCCc---EEEEeCCC----------CHHHHHHhhcC----CCeeEEEEeC-CCCCCCcccC----HHHHHHHHHhCCCEE
Q 009523 263 KMGI---TATVIDPA----------DMEGLEAALNN----NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIV 320 (532)
Q Consensus 263 ~~Gv---~v~~vd~~----------dle~Le~al~~----~~tklV~les-P~NptG~v~d----l~~I~~la~~~gi~l 320 (532)
.++. .+..++.. |+++|++++++ .++++|+++. ++| ||.+.+ +++|.++|++||+++
T Consensus 158 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~l 236 (426)
T 1sff_A 158 GMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIML 236 (426)
T ss_dssp TSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEE
T ss_pred ccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEE
Confidence 1111 14444432 68899988862 2688998854 466 997777 999999999999999
Q ss_pred EEECCCCCCCc------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH
Q 009523 321 CIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 394 (532)
Q Consensus 321 IvDet~a~~~~------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l 394 (532)
|+||+|..... .+.....+|++ |+||.+++ | ...|++++++++++.+...........++..+..+...+
T Consensus 237 i~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-G-lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal 312 (426)
T 1sff_A 237 IADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-G-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVL 312 (426)
T ss_dssp EEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-S-SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHH
T ss_pred EEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-C-CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHH
Confidence 99999874211 12222346665 78899997 5 557999998888776653222222334666666666555
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-------CHHHHH
Q 009523 395 KTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATI 461 (532)
Q Consensus 395 ~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-------~~~~~~ 461 (532)
+.+.. ..++..++.+++.+.|++ ++.+..+ .+.|.++++++.+ ......
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~ 374 (426)
T 1sff_A 313 KVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDV------------------RGLGAMIAIELFEDGDHNKPDAKLTA 374 (426)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEE------------------EEETTEEEEEEBGGGCTTSBCHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCChHHHH
Confidence 54432 334455666666666654 2221111 1247799999952 123455
Q ss_pred HHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 462 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 462 ~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
.+.+.|...++.+..|+. .++.|||+++.. +.+++++.|.++++
T Consensus 375 ~l~~~l~~~gi~v~~~~~-------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 375 EIVARARDKGLILLSCGP-------------------------YYNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp HHHHHHHHTTEECEEEST-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCCC-------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 666666555666654421 147899999743 34445555555554
No 173
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.87 E-value=2e-20 Score=199.19 Aligned_cols=211 Identities=18% Similarity=0.164 Sum_probs=150.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 274 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---- 274 (532)
.++...+|+++|+++++.+++++++||++|+.+++.+++++|| +++.+.|++.+. ..+...|.++..++.+
T Consensus 73 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~---~~~~~~G~~~~~v~~~~~~~ 147 (456)
T 2ez2_A 73 GSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTR---YHQEKNGAVFVDIVRDEAHD 147 (456)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHH---HHHHHTTCEEEECBCGGGGC
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhH---HHHHHcCCEEEEeccccccc
Confidence 4678899999999999999999999999999999999999999 677888844321 2344568887776432
Q ss_pred -----------CHHHHHHhhcCCCe----eEEEEeCCCC-CCCcccC---HHHHHHHHHhCCCEEEEECCCCCC------
Q 009523 275 -----------DMEGLEAALNNNNV----SLFFTESPTN-PFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------ 329 (532)
Q Consensus 275 -----------dle~Le~al~~~~t----klV~lesP~N-ptG~v~d---l~~I~~la~~~gi~lIvDet~a~~------ 329 (532)
|+++|++++++ ++ ++|++++|+| |||.+.+ +++|+++|++||+++|+|++++.+
T Consensus 148 ~~~~~~~~~~~d~~~l~~~i~~-~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~ 226 (456)
T 2ez2_A 148 AGLNIAFKGDIDLKKLQKLIDE-KGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIK 226 (456)
T ss_dssp TTCCCSCTTCBCHHHHHHHHHH-HCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHHHh-ccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccc
Confidence 78999999875 34 9999999999 9999987 899999999999999999997641
Q ss_pred -----Ccccc-------cccCCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhc-C----CCccHHH-HHHH
Q 009523 330 -----LNQKA-------LSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL-G----GALNPNA-AYLI 390 (532)
Q Consensus 330 -----~~~~~-------l~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~-G----~~~~~~~-a~l~ 390 (532)
+...+ .....|+++.|++|+++ .+ ++|++++ ++++++.++...... | ...+... +.++
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a 303 (456)
T 2ez2_A 227 EQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-VN--IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMA 303 (456)
T ss_dssp HHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CS--SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHH
T ss_pred ccccccCCcchhhhhhhhcccCCEEEEeCcccCC-CC--ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHH
Confidence 11111 12346888889889866 33 4799988 678888776544321 1 1112211 1112
Q ss_pred HHhHHHH-HHHHHHHHHHHHHHHHHHHhC
Q 009523 391 IRGMKTL-HLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 391 l~~l~tl-~~r~~~~~~~a~~la~~L~~~ 418 (532)
...++.+ ...+++..++.+++.+.|++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 304 IGLREAMQYEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 2223333 344555566677777788763
No 174
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.86 E-value=1.6e-20 Score=202.58 Aligned_cols=211 Identities=16% Similarity=0.115 Sum_probs=145.7
Q ss_pred HHHHHHHhhhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH----hcccCC--cEEEEe--
Q 009523 205 VVEEKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET----VLPKMG--ITATVI-- 271 (532)
Q Consensus 205 ~Le~~lA~l~ga~~-----~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~----~l~~~G--v~v~~v-- 271 (532)
.+++++++++|.+. .|+++||++|+..++.++++|||+|+++++.|++....... .....| +.+..+
T Consensus 94 ~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~ 173 (483)
T 1rv3_A 94 LCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV 173 (483)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB
T ss_pred HHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc
Confidence 34489999999852 48999999988888999999999999999999886421100 011112 344444
Q ss_pred C----CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-----cccccccCCcEE
Q 009523 272 D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLV 342 (532)
Q Consensus 272 d----~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-----~~~~l~~gaDiv 342 (532)
+ ..|+++|++++++.+||+|++ +++|++ .+.|+++|.++|+++|+++|+|+++..+. ...++. ++|++
T Consensus 174 ~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~div 250 (483)
T 1rv3_A 174 NPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCHVV 250 (483)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCSEE
T ss_pred ccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CCcEE
Confidence 3 138999999998337999999 999998 99999999999999999999999976321 122333 68999
Q ss_pred EECCccccCCCCCcEEEEEEeChH---------------HHHHHHHHh-hhcCCCccHHHHH---HHHHhH--HHHHHHH
Q 009523 343 LHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLH-HVLGGALNPNAAY---LIIRGM--KTLHLRV 401 (532)
Q Consensus 343 v~S~sK~lgg~gd~~gG~lv~~~~---------------li~~l~~~~-~~~G~~~~~~~a~---l~l~~l--~tl~~r~ 401 (532)
+.|+||+++|+. +|+++++++ +.+.+.... ....++....... .++..+ ..+....
T Consensus 251 ~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~ 327 (483)
T 1rv3_A 251 TTTTHKTLRGCR---AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ 327 (483)
T ss_dssp EEESSGGGCCCS---CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred EecCcccCCCCC---ceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 999999997664 688888764 333443321 1111222222111 122222 2345566
Q ss_pred HHHHHHHHHHHHHHHhCCCce
Q 009523 402 QQQNSTALRMAKILEAHPKVK 422 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~p~v~ 422 (532)
++..++++++.+.|.+. ++.
T Consensus 328 ~~~~~~~~~l~~~L~~~-g~~ 347 (483)
T 1rv3_A 328 RQVVANCRALSAALVEL-GYK 347 (483)
T ss_dssp HHHHHHHHHHHHHHHHT-TCE
T ss_pred HHHHHHHHHHHHHHHhc-CCE
Confidence 77788999999999886 553
No 175
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.86 E-value=3.3e-20 Score=195.90 Aligned_cols=283 Identities=12% Similarity=0.019 Sum_probs=182.0
Q ss_pred CCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHHh----------c
Q 009523 196 GRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETV----------L 261 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all~-~Gd~VIv~~~~y~~t~~~~~~~----------l 261 (532)
.+|.++...+++++|++++|. ++++++++|++|+..+++.+.. +||+||+.+|.|++........ .
T Consensus 81 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~ 160 (419)
T 2eo5_A 81 NDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIV 160 (419)
T ss_dssp SCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSS
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCcccccccc
Confidence 567888899999999999986 3577778889999999987643 4999999999998743322111 1
Q ss_pred ccCCcEEEEeCCC---------------------CHHHHH-HhhcC----CCeeEEEEeCCCCCCCcccC----HHHHHH
Q 009523 262 PKMGITATVIDPA---------------------DMEGLE-AALNN----NNVSLFFTESPTNPFLRCVD----VKLVSD 311 (532)
Q Consensus 262 ~~~Gv~v~~vd~~---------------------dle~Le-~al~~----~~tklV~lesP~NptG~v~d----l~~I~~ 311 (532)
......+..++.. |+++|+ +++++ .++++|+++..+||+|.+.+ +++|.+
T Consensus 161 ~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 240 (419)
T 2eo5_A 161 GPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQK 240 (419)
T ss_dssp CCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred CCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHH
Confidence 1111234454432 367888 88863 25788887655577898776 999999
Q ss_pred HHHhCCCEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHH
Q 009523 312 LCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 385 (532)
Q Consensus 312 la~~~gi~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~ 385 (532)
+|++||+++|+||+|.... .........|++ |++|.+++ |-...|+++++++++ .+ ..........++.
T Consensus 241 l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~ 315 (419)
T 2eo5_A 241 LAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMPIGATIFRKDLD-FK-PGMHSNTFGGNAL 315 (419)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEEEGGGC-CC-------CCCCCHH
T ss_pred HHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-CccceEEEEEchHhh-cC-CcccCCCCCCCHH
Confidence 9999999999999976421 112223346766 68899986 313568888888776 55 2111122334677
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009523 386 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 465 (532)
Q Consensus 386 ~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~ 465 (532)
.+..+...++.+....++..++.+++.+.|++. +..+ ++.|+++++++.++..... +.+
T Consensus 316 ~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~--~~~~------------------~~~g~~~~i~~~~~~~~~~-~~~ 374 (419)
T 2eo5_A 316 ACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL--ADDV------------------RGIGLAWGLEYNEKKVRDR-IIG 374 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--SSEE------------------EEETTEEEEECSCHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhe------------------EeeeEEEEEEEecCccHHH-HHH
Confidence 666666666655444455567777777777653 1111 1247789998842212344 666
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 531 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~~ 531 (532)
.|...++.+..+ .++.|||+++.. +.+.+++.|.+++++
T Consensus 375 ~l~~~Gv~v~~~---------------------------~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 375 ESFKRGLLLLPA---------------------------GRSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp HHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEecC---------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 665456554432 146899988754 344555555555543
No 176
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.86 E-value=2.5e-20 Score=194.09 Aligned_cols=213 Identities=12% Similarity=0.047 Sum_probs=145.4
Q ss_pred hhHHHHHHHHHhhhCC--------C--cEEEeCCHHHHHHHHH--HHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 201 PTTVVVEEKMSALEGA--------E--STVIMASGMSASTVML--LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--------~--~~i~~sSG~~Ai~~al--~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
+...+++++++++++. + +.+++++|++|+..++ .+++++||+|+++.|+|.+... .++..|.++
T Consensus 70 ~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~----~~~~~g~~~ 145 (397)
T 3fsl_A 70 EGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVA----IFAGAGFEV 145 (397)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHH----HHHHTTCCE
T ss_pred CchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHH----HHHHcCCce
Confidence 3456788888887632 3 4566667779999984 5668999999999999988543 345568888
Q ss_pred EEeCC----C---CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEECCCCCCCcc----
Q 009523 269 TVIDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ---- 332 (532)
Q Consensus 269 ~~vd~----~---dle~Le~al~~--~~tklV~lesP~NptG~v~dl---~~I~~la~~~gi~lIvDet~a~~~~~---- 332 (532)
..++. . |+++|++++++ .+++++++++|+||||.+.+. ++|+++|+++|+++|+|++|......
T Consensus 146 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (397)
T 3fsl_A 146 STYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEED 225 (397)
T ss_dssp EEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGG
T ss_pred EEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccc
Confidence 88875 3 89999999973 268999999999999999765 58889999999999999998754321
Q ss_pred -cc-----cccCCcEEEECCccccCCCCCcEEEEEEe---ChHHHHHHHHH-h---hhcCCCccHHHHHHHHHh------
Q 009523 333 -KA-----LSLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNL-H---HVLGGALNPNAAYLIIRG------ 393 (532)
Q Consensus 333 -~~-----l~~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~-~---~~~G~~~~~~~a~l~l~~------ 393 (532)
.+ ...+.++++.|+||.+|.+| ...|+++. ++++++.+... . .......+...+..+...
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 304 (397)
T 3fsl_A 226 AYAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEAL 304 (397)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHH
T ss_pred cHHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHH
Confidence 11 12345689999999998655 34677753 45666544321 1 111122232322222211
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 394 ----MKTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 394 ----l~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.+.+....++..++++.+.+.|+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 305 KASWLKEVEEMRTRILAMRQELVKVLSTE 333 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2234445556667788888888875
No 177
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.86 E-value=3.2e-20 Score=198.63 Aligned_cols=210 Identities=14% Similarity=0.154 Sum_probs=151.0
Q ss_pred hHHHHHHHHHhhhCCCc-EEEeCCHH-HHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 202 TTVVVEEKMSALEGAES-TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga~~-~i~~sSG~-~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
..+++++++++++|.+. ++++++|+ .++.+++.++.. +|++||++++.|.+... .++..|++++.++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~----~~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIK----AVSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH----HHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHH----HHHHcCCCceEEEEeccC
Confidence 45668999999999864 67777778 566556665533 77889999999987543 34457888887764
Q ss_pred ----CCHHHHHHhh-cC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-cccc---cc--CC
Q 009523 274 ----ADMEGLEAAL-NN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---SL--GA 339 (532)
Q Consensus 274 ----~dle~Le~al-~~---~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l---~~--ga 339 (532)
.|+++|++++ ++ .++.+|++++|+||+|.+.|+++|.++|+++|+++++|++|+.... ..+. .. ++
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~ 289 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV 289 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCC
Confidence 3799999999 41 3688899999999999999999999999999999999999875432 1111 12 79
Q ss_pred cEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHH
Q 009523 340 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKI 414 (532)
Q Consensus 340 Divv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~--~~~~~a~l~l~~l--~tl~~r~~~~~~~a~~la~~ 414 (532)
|+++.|+||+++++. .+|+++. ++++++.+... ..|.. ......+.++..+ +.+..+.++..++++++.+.
T Consensus 290 D~~~~s~hK~~~~p~--g~G~l~~~~~~~~~~l~~~--~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 365 (456)
T 2z67_A 290 DAVVSSSDKNLLTPI--GGGLVYSTDAEFIKEISLS--YPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 365 (456)
T ss_dssp SEEEEEHHHHHCCCS--SCEEEEESCHHHHHHHHTT--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCCC--CeEEEEEcCHHHHhhcCcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999876543 3688888 56777776432 22322 1123334333332 34555667777888899988
Q ss_pred HHhCC
Q 009523 415 LEAHP 419 (532)
Q Consensus 415 L~~~p 419 (532)
|++.+
T Consensus 366 L~~~~ 370 (456)
T 2z67_A 366 LNDLS 370 (456)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 88764
No 178
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.86 E-value=3.1e-20 Score=199.68 Aligned_cols=211 Identities=17% Similarity=0.154 Sum_probs=154.0
Q ss_pred hHHHHHHHHHhhhCCCcEE-EeCCHHHHHHHHHHHh----ccCCC-----EEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 202 TTVVVEEKMSALEGAESTV-IMASGMSASTVMLLAL----VPAGG-----HIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga~~~i-~~sSG~~Ai~~al~al----l~~Gd-----~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
..+++++.+++++|.+..+ ++++|++|+..+++++ .++|| +|+++.+.|+.+... +...|++++.+
T Consensus 108 l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~----~~~~G~~vv~v 183 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT----ASMAGYQVREI 183 (474)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH----HHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHH----HHHCCCEEEEe
Confidence 4677899999999987655 4477789988766554 36888 999999999876533 45568898888
Q ss_pred CCC-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEECCCCCCC--cccccccCCcEEE
Q 009523 272 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVL 343 (532)
Q Consensus 272 d~~-----dle~Le~al~~~~tklV~lesP~NptG~v-~dl~~I~~la~~~gi~lIvDet~a~~~--~~~~l~~gaDivv 343 (532)
+.+ |+++|++++++ ++++|++++| ||+|.+ .|+++|+++|+++|+++|+|++++.+. ...+...|+|+++
T Consensus 184 ~~~~~~~~d~~~L~~~i~~-~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~ 261 (474)
T 1wyu_B 184 PSGPEGEVDLEALKRELGP-HVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVH 261 (474)
T ss_dssp CBCTTSSBCHHHHHHHCST-TEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEE
T ss_pred cCCCCCCcCHHHHHHhhCC-CceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEE
Confidence 764 89999999987 6999999998 589998 699999999999999999999985432 2344556899999
Q ss_pred ECCccccCCC---CCcEEEEEEeChHHHHHHHH-Hh------------------hhcCCCccHHHHHHHHHh-----HHH
Q 009523 344 HSATKFIGGH---NDVLAGSISGSGKLVTQIRN-LH------------------HVLGGALNPNAAYLIIRG-----MKT 396 (532)
Q Consensus 344 ~S~sK~lgg~---gd~~gG~lv~~~~li~~l~~-~~------------------~~~G~~~~~~~a~l~l~~-----l~t 396 (532)
.|+||+++++ |+..+|++++++++++.+.. .. .....+.++..+..+... .+.
T Consensus 262 ~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~ 341 (474)
T 1wyu_B 262 LNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEG 341 (474)
T ss_dssp CCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHH
Confidence 9999999854 22347899999887765541 00 000112233333222222 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC
Q 009523 397 LHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 397 l~~r~~~~~~~a~~la~~L~~~ 418 (532)
+....++..++++++.+.|++.
T Consensus 342 l~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 342 LKKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 4555666778888999999875
No 179
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=3.1e-20 Score=194.73 Aligned_cols=250 Identities=17% Similarity=0.157 Sum_probs=155.7
Q ss_pred HHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH-hcccCCcEEEEeCCC------CH
Q 009523 205 VVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDPA------DM 276 (532)
Q Consensus 205 ~Le~~lA~l~ga~~~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~-~l~~~Gv~v~~vd~~------dl 276 (532)
..++.+++++|.+.. ++++||++|+..++.+++++||+|+++.++|++....... .....++.+..++.+ |+
T Consensus 82 ~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 161 (425)
T 3ecd_A 82 LAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDY 161 (425)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCH
T ss_pred HHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCH
Confidence 345888999998876 4589999999999999999999999999999873211111 122223455555433 89
Q ss_pred HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-----cccccccCCcEEEECCccccC
Q 009523 277 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-----~~~~l~~gaDivv~S~sK~lg 351 (532)
++|++++++.++++|++++|+|| ...++++|.++|++||+++|+|+++..+. ...+.. .+|+++.|+||+++
T Consensus 162 ~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~ 238 (425)
T 3ecd_A 162 DQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHKTLR 238 (425)
T ss_dssp HHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGGGC
T ss_pred HHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCcccC
Confidence 99999997336999999999985 67899999999999999999999954321 122233 37999999999997
Q ss_pred CCCCcEEEEEEeC-hHHHHHHHHHhhh--cCCCccHHHHHH--HHH-hH-HHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009523 352 GHNDVLAGSISGS-GKLVTQIRNLHHV--LGGALNPNAAYL--IIR-GM-KTLHLRVQQQNSTALRMAKILEAHPKVKRV 424 (532)
Q Consensus 352 g~gd~~gG~lv~~-~~li~~l~~~~~~--~G~~~~~~~a~l--~l~-~l-~tl~~r~~~~~~~a~~la~~L~~~p~v~~V 424 (532)
|+ .+|+++++ +++.+.+...... .+....+..+.+ ++. .+ +.+....++..++++++.+.|.+. ++. +
T Consensus 239 g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~ 313 (425)
T 3ecd_A 239 GP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVD-L 313 (425)
T ss_dssp CC---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E
T ss_pred CC---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCe-e
Confidence 65 37898887 4666666553322 112222222211 111 11 234455566677888888888873 332 2
Q ss_pred eCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009523 425 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 477 (532)
Q Consensus 425 ~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G 477 (532)
..|. +.+.++++.++........+.+.|...++.+..+
T Consensus 314 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 351 (425)
T 3ecd_A 314 VTGG---------------TDNHLLLVDLRPKGLKGAQVEQALERAGITCNKN 351 (425)
T ss_dssp GGGS---------------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEC
T ss_pred ccCC---------------CCceEEEEEeCCCCCCHHHHHHHHHHcCCEeccc
Confidence 2111 1356888888631112334444444446666543
No 180
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.86 E-value=6.2e-20 Score=195.30 Aligned_cols=288 Identities=15% Similarity=0.179 Sum_probs=185.0
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHH-HHHHhcc---
Q 009523 197 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRI-FIETVLP--- 262 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~--------~Gd~VIv~~~~y~~t~~-~~~~~l~--- 262 (532)
++..+...+++++|+++++. +++++++||++|+.++++.+.. +||+||+.++.|++... .+. ...
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~-~~g~~~ 167 (449)
T 3a8u_X 89 QYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTS-LGGVNG 167 (449)
T ss_dssp SCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHH-HCCCHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhh-ccCChh
Confidence 67788899999999999953 5688889999999999987764 78999999999987532 221 111
Q ss_pred --------cCCcEEEEeCC--------CC--------HHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHHHH
Q 009523 263 --------KMGITATVIDP--------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSD 311 (532)
Q Consensus 263 --------~~Gv~v~~vd~--------~d--------le~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I~~ 311 (532)
..++....++. .| +++|++++++ .++++|+++..+|++|.+.+ +++|.+
T Consensus 168 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 247 (449)
T 3a8u_X 168 NRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNRE 247 (449)
T ss_dssp HHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred hccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHH
Confidence 01333332221 15 8999999872 25888888766678999888 999999
Q ss_pred HHHhCCCEEEEECCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-------hc
Q 009523 312 LCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VL 378 (532)
Q Consensus 312 la~~~gi~lIvDet~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-------~~ 378 (532)
+|++||+++|+||++... .. ........|++ |++|.+++ |....|++++++++++.+..... ..
T Consensus 248 l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 324 (449)
T 3a8u_X 248 ICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTPEYAVEFPH 324 (449)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCC
T ss_pred HHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEEEEECHHHHHHhhccCcccccccccc
Confidence 999999999999998532 11 12223346876 67899986 31346777888888888765311 11
Q ss_pred C--CCccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 379 G--GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 379 G--~~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
+ ...++..+..+...++.+.. ..++..++.+++.+.|++.+.+ |.. ...++.|.+++++++
T Consensus 325 ~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-----~~~----------~~~~~~g~~~~i~~~ 389 (449)
T 3a8u_X 325 GYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGA-----KNV----------IDIRNFGLAGAIQIA 389 (449)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTS-----TTE----------EEEEEETTEEEEEEC
T ss_pred cCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC-----CCe----------EEEeeeEEEEEEEEe
Confidence 2 23466666666666665432 3455556677777777653211 110 001235789999997
Q ss_pred CCH--H--HHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHH
Q 009523 455 GDL--T--ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVL 526 (532)
Q Consensus 455 g~~--~--~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~ 526 (532)
+.. . ....+.+.|...++.+..| .+.|||+++.. +.+.+++.|.
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~----------------------------g~~iRis~~~~~t~~~i~~~l~~l~ 441 (449)
T 3a8u_X 390 PRDGDAIVRPFEAGMALWKAGFYVRFG----------------------------GDTLQFGPTFNSKPQDLDRLFDAVG 441 (449)
T ss_dssp CBTTBSSHHHHHHHHHHHHHTEECEEE----------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cCcccccccHHHHHHHHHHCCcEEecC----------------------------CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 531 1 1224555544335444321 16799997643 3445555565
Q ss_pred HHHhh
Q 009523 527 QALHA 531 (532)
Q Consensus 527 ~AL~~ 531 (532)
+++++
T Consensus 442 ~~l~~ 446 (449)
T 3a8u_X 442 EVLNK 446 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 181
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.86 E-value=2.1e-20 Score=194.71 Aligned_cols=215 Identities=14% Similarity=0.098 Sum_probs=148.7
Q ss_pred CchhHHHHHHHHHhhh---C-----CCcEEE--eCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 199 GNPTTVVVEEKMSALE---G-----AESTVI--MASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~---g-----a~~~i~--~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
..+...+|++++++++ + .+++++ +++|++|+.+++..+ +.+||+|+++.|+|++... .++..|.
T Consensus 67 ~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~ 142 (396)
T 2q7w_A 67 GIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS----VFNSAGL 142 (396)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH----HHHHTTC
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHH----HHHHcCC
Confidence 3455678999999987 2 245665 778889999998765 4699999999999998653 3445688
Q ss_pred EEEEeCC---C----CHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 267 TATVIDP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 267 ~v~~vd~---~----dle~Le~al~~~--~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
++..++. + |+++|++++++. +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 143 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 222 (396)
T 2q7w_A 143 EVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLE 222 (396)
T ss_dssp EEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHH
T ss_pred ceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 8877765 3 799999998752 4788999999999999987 45789999999999999999875422
Q ss_pred -----cccc-cc-CCcEEEECCccccCCCCCcEEEEEEe---ChH----HHHHHHHHhhhcCCCccHHHHHHHHHhHHH-
Q 009523 332 -----QKAL-SL-GADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMKT- 396 (532)
Q Consensus 332 -----~~~l-~~-gaDivv~S~sK~lgg~gd~~gG~lv~---~~~----li~~l~~~~~~~G~~~~~~~a~l~l~~l~t- 396 (532)
...+ .. ..++++.|+||.+|.+| ...|++++ +++ +++.+...........++..++.+...++.
T Consensus 223 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 301 (396)
T 2q7w_A 223 EDAEGLRAFAAMHKELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSND 301 (396)
T ss_dssp HHTHHHHHHHHHCSCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSH
T ss_pred chhHHHHHHHhcCCcEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcCh
Confidence 1111 12 34688999999998665 34677775 553 444444332222223356555555444432
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhC
Q 009523 397 ---------LHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 397 ---------l~~r~~~~~~~a~~la~~L~~~ 418 (532)
+....++..++++.+.+.|++.
T Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (396)
T 2q7w_A 302 ALRAIWEQELTDMRQRIQRMRQLFVNTLQEK 332 (396)
T ss_dssp HHHHHHHHHHHHC-CHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2223344556677778888775
No 182
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.86 E-value=5.3e-20 Score=196.27 Aligned_cols=205 Identities=20% Similarity=0.169 Sum_probs=147.0
Q ss_pred HHHHhhhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHH-hcccCCcEEEEeC------CCCHHHH
Q 009523 208 EKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID------PADMEGL 279 (532)
Q Consensus 208 ~~lA~l~ga~~~i~-~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~-~l~~~Gv~v~~vd------~~dle~L 279 (532)
+++++++|.+.+.+ ++||++|+..++.+++++||+|+++++.|++....... .+...+..+..++ ..|+++|
T Consensus 98 ~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 177 (447)
T 3h7f_A 98 DRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAV 177 (447)
T ss_dssp HHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHH
T ss_pred HHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHH
Confidence 89999999987766 89999999999999999999999999998773211000 0111233444443 2489999
Q ss_pred HHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-----cccccccCCcEEEECCccccCCCC
Q 009523 280 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLVLHSATKFIGGHN 354 (532)
Q Consensus 280 e~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-----~~~~l~~gaDivv~S~sK~lgg~g 354 (532)
++++++.++++|++++|+||++. ++++|.++|+++|+++|+|+++..++ ...+. .++|+++.|+||+++|+
T Consensus 178 ~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~- 253 (447)
T 3h7f_A 178 RATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGG- 253 (447)
T ss_dssp HHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCC-
T ss_pred HHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCC-
Confidence 99986436899999999998876 99999999999999999999965321 12233 35799999999999865
Q ss_pred CcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHH--HHHh-H-HHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 355 DVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYL--IIRG-M-KTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 355 d~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l--~l~~-l-~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.+|++++++++++.++..... .|+...+..+.+ ++.. . +.+..+.++..++++++.+.|++.
T Consensus 254 --~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 254 --RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp --SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred --CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 479999999888888764332 233222222221 1111 1 144556677788899999988764
No 183
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.86 E-value=2.4e-20 Score=195.19 Aligned_cols=283 Identities=12% Similarity=0.024 Sum_probs=175.3
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccC--CcEEEEeCCC
Q 009523 201 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPA 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~---~~i~-~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~--Gv~v~~vd~~ 274 (532)
+..+++++++++++|.+ ++++ +++|++|+.+++.+++++| .+++....|.... . ...... |.+++.++.+
T Consensus 78 ~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~--~-~~~~~~~~g~~~~~v~~~ 153 (398)
T 2fyf_A 78 NLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKF--A-SAVSKNPFVGEPIIITSD 153 (398)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHH--H-HHHHHCTTSCCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHH--H-HHHHHhCCCCceEEEecC
Confidence 35788999999999974 3555 6788899999999999887 2333444443211 1 112222 5666666543
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcccccccCCcEEEECCccccCCCC
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHN 354 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~~l~~gaDivv~S~sK~lgg~g 354 (532)
+-......+++ ++++|++++|+||||.+.|+++|.++ +|+++|+|++++.+....... ++|+++.|+||++++++
T Consensus 154 ~g~~~~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~g 228 (398)
T 2fyf_A 154 PGSAPEPQTDP-SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDG 228 (398)
T ss_dssp TTCCCCCCCCT-TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCS
T ss_pred CCCCCCccccC-CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCC
Confidence 10000112455 69999999999999999999988877 899999999987543211122 47999999999999885
Q ss_pred CcEEEEEEeChHHHHHHHHHh---------------------hhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHH
Q 009523 355 DVLAGSISGSGKLVTQIRNLH---------------------HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNST 407 (532)
Q Consensus 355 d~~gG~lv~~~~li~~l~~~~---------------------~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~ 407 (532)
+ .|+++.++++++.++... .....+.+....+.+..+++. +..+.++..++
T Consensus 229 g--~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 306 (398)
T 2fyf_A 229 G--LWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADS 306 (398)
T ss_dssp S--EEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred c--eEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 2 688889998888774321 001123344433333334432 34455666788
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 408 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 408 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
++++.+.|++.|++. +..+. |.. ..+.+++|.++.+ .....+.+.|...++.+..|. .
T Consensus 307 ~~~l~~~L~~~~g~~-~~~~~----~~~--------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~g~-------~- 364 (398)
T 2fyf_A 307 SQRLYSWAQERPYTT-PFVTD----PGL--------RSQVVGTIDFVDD-VDAGTVAKILRANGIVDTEPY-------R- 364 (398)
T ss_dssp HHHHHHHHHHSTTEE-ESCCS----GGG--------BCSSEEEEEECTT-SCHHHHHHHHHHTTCBCCSCC-------T-
T ss_pred HHHHHHHHHHcCCce-eccCC----hhh--------cCCcEEEEECCCC-CCHHHHHHHHHHCCcEEecCc-------c-
Confidence 888999998877653 32211 110 1234899999632 223455555554466655431 0
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHhh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVED----FEDLKADVLQALHA 531 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed----~~dli~dL~~AL~~ 531 (532)
...++.||||++... .+.+++.|++++++
T Consensus 365 ---------------~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 365 ---------------KLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp ---------------TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred ---------------cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 012578999999643 44455555555543
No 184
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.86 E-value=3.8e-20 Score=194.24 Aligned_cols=214 Identities=11% Similarity=0.075 Sum_probs=147.0
Q ss_pred chhHHHHHHHHHhhh-C-------CCcEEE--eCCHHHHHHHHH--HHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE
Q 009523 200 NPTTVVVEEKMSALE-G-------AESTVI--MASGMSASTVML--LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 267 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~-g-------a~~~i~--~sSG~~Ai~~al--~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~ 267 (532)
.+...+|++++++++ + .+++++ +++|++|+.+++ ..++.+||+|+++.|+|++... .++..|.+
T Consensus 72 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~----~~~~~g~~ 147 (412)
T 1yaa_A 72 ITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA----IFENQGLK 147 (412)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH----HHHTTTCC
T ss_pred CCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH----HHHHcCce
Confidence 345678899999887 3 246677 777889999873 4556799999999999998653 34456777
Q ss_pred EEEeCC-------CCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc---
Q 009523 268 ATVIDP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--- 332 (532)
Q Consensus 268 v~~vd~-------~dle~Le~al~~~--~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~--- 332 (532)
+..++. .|+++|++++++. +++++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 148 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~ 227 (412)
T 1yaa_A 148 TATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLD 227 (412)
T ss_dssp EEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHH
T ss_pred EEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc
Confidence 777664 2789999988652 2455666999999999987 557888999999999999998643211
Q ss_pred -c--cc----ccC----CcEEEECCccccCCCCCcEEEEEE--e-----ChH----HHHHHHHHhhhcCCCccHHHHHHH
Q 009523 333 -K--AL----SLG----ADLVLHSATKFIGGHNDVLAGSIS--G-----SGK----LVTQIRNLHHVLGGALNPNAAYLI 390 (532)
Q Consensus 333 -~--~l----~~g----aDivv~S~sK~lgg~gd~~gG~lv--~-----~~~----li~~l~~~~~~~G~~~~~~~a~l~ 390 (532)
. +. ..+ .++++.|+||.+|++| ...|+++ + +++ +++.++..........++...+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~ 306 (412)
T 1yaa_A 228 KDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYG-ERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIV 306 (412)
T ss_dssp HHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGG-GCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred chhHHHHHHHhcCCCCcceEEEeccCCCCCCcC-CcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHH
Confidence 1 11 123 4688999999999766 3467777 6 555 677766643333333355544444
Q ss_pred HHhHH----------HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 391 IRGMK----------TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 391 l~~l~----------tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
...++ .+....++..++++.+.+.|+++
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1yaa_A 307 AKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL 344 (412)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44443 23333445556777777888764
No 185
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.85 E-value=5.2e-21 Score=204.42 Aligned_cols=166 Identities=13% Similarity=0.142 Sum_probs=125.1
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
++....++.+...++++.+|+ +|.++.+++++|+ +|+.+++++++++||+|++++++|.++...+. ..|.++.+
T Consensus 48 ~~d~~~~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~ 122 (446)
T 2x3l_A 48 GLDDLHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALD----ISQQEGHF 122 (446)
T ss_dssp TSCCTTSCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHH----HHTCCEEE
T ss_pred CCccccCcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHH----HcCCeEEE
Confidence 344455677888999999999 9987777776665 99999999999999999999999998765442 24666666
Q ss_pred eCC--C---------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-----cccc
Q 009523 271 IDP--A---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKA 334 (532)
Q Consensus 271 vd~--~---------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-----~~~~ 334 (532)
++. + |+++| +.+ ++++|++++| |++|.+.|+++|.++|+++|+++|+|++++..+ ....
T Consensus 123 v~~~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~ 197 (446)
T 2x3l_A 123 IETHQSPLTNHYNKVNLSRL---NND-GHKLVVLTYP-NYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDST 197 (446)
T ss_dssp CEEEECTTTSSEEEEEC-----------CCEEEEESS-CTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCG
T ss_pred EeCeeccccCcCCCCCHHHH---cCC-CceEEEEECC-CCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCCh
Confidence 543 2 34555 344 6899999985 569999999999999999999999999987632 2344
Q ss_pred cccCCcEEEECCccccCCCCCcEEEEEEeChHHHH
Q 009523 335 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 369 (532)
Q Consensus 335 l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~ 369 (532)
...|+|+++.|+||+++++. .+|++++++++++
T Consensus 198 ~~~g~Di~~~S~~K~l~~~~--g~g~l~~~~~~i~ 230 (446)
T 2x3l_A 198 LNYQADYVVQSFHKTLPALT--MGSVLYIHKNAPY 230 (446)
T ss_dssp GGGTCSEEEECHHHHSSSCT--TCEEEEEETTCTT
T ss_pred HHcCCCEEEECCcccccccc--ccEEEEEcCCcCC
Confidence 45689999999999776553 2588888766543
No 186
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.85 E-value=6.6e-20 Score=193.39 Aligned_cols=213 Identities=12% Similarity=0.096 Sum_probs=144.0
Q ss_pred hhHHHHHHHHHhhhCC--------C--cEEEeCCHHHHHHHH--HHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEE
Q 009523 201 PTTVVVEEKMSALEGA--------E--STVIMASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 268 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga--------~--~~i~~sSG~~Ai~~a--l~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v 268 (532)
....+|+++++++++. + +.+++++|++|+..+ +.+++++||+|++++|+|.+... .++..|.++
T Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~----~~~~~g~~~ 167 (420)
T 4f4e_A 92 DGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA----LFDMAGFEV 167 (420)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH----HHHHTTCCE
T ss_pred CCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH----HHHHcCCeE
Confidence 3456677777776532 2 456666777999998 45678999999999999988653 344567777
Q ss_pred EEeCC----C---CHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCcc----
Q 009523 269 TVIDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 332 (532)
Q Consensus 269 ~~vd~----~---dle~Le~al~~--~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~~---- 332 (532)
..++. + |+++|++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 168 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~ 247 (420)
T 4f4e_A 168 VAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEAD 247 (420)
T ss_dssp EEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGG
T ss_pred EEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchh
Confidence 77765 2 79999999972 26899999999999999987 558888899999999999998654321
Q ss_pred -cc-----cccCCcEEEECCccccCCCCCcEEEEEEe---ChHHHHHH----HHHhhhcCCCccHHHHHHHHHhH-----
Q 009523 333 -KA-----LSLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQI----RNLHHVLGGALNPNAAYLIIRGM----- 394 (532)
Q Consensus 333 -~~-----l~~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l----~~~~~~~G~~~~~~~a~l~l~~l----- 394 (532)
.. ...+.++++.|+||.++.+|. ..|+++. ++++++.+ +..........+...++.+...+
T Consensus 248 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 326 (420)
T 4f4e_A 248 AAAVRLFAAANLNVFVSSSFSKSFSLYGE-RVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPEL 326 (420)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHH
T ss_pred hHHHHHHHhcCCCEEEEEeCCccCcCcCC-CcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHH
Confidence 01 123567999999999996664 4566642 45655543 22222222223333333332222
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 395 -----KTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 395 -----~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
+.+....++..++++.+.+.|+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 327 RASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223444455567778888888875
No 187
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.85 E-value=3.5e-20 Score=199.99 Aligned_cols=263 Identities=15% Similarity=0.107 Sum_probs=154.8
Q ss_pred CCCCCCC--CchhHHHHH----HHHHhhhCCCc----E-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHH---
Q 009523 192 SFEYGRY--GNPTTVVVE----EKMSALEGAES----T-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFI--- 257 (532)
Q Consensus 192 ~~~Y~R~--~~p~~~~Le----~~lA~l~ga~~----~-i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~--- 257 (532)
+|..+|| +++..++|| +++++++|++. + ++++||++|+..++.++++|||+|++.++.|++.....
T Consensus 85 G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~ 164 (490)
T 2a7v_A 85 GYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMS 164 (490)
T ss_dssp C------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC---------------
T ss_pred CCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhh
Confidence 3444453 456666777 89999999875 4 45569999999999999999999999999997643110
Q ss_pred H-HhcccCCc--EEEEeC------CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCC
Q 009523 258 E-TVLPKMGI--TATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 258 ~-~~l~~~Gv--~v~~vd------~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~ 328 (532)
. ..+...|. .+..++ ..|+++|+++++++++++|+++.++|| .+.|+++|.++|+++|+++++|+++..
T Consensus 165 ~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~ 242 (490)
T 2a7v_A 165 DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp ----------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGH
T ss_pred cchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEcccccc
Confidence 0 01112232 222332 238999999986446899999888876 467999999999999999999999642
Q ss_pred -----CCcccccccCCcEEEECCccccCCCCCcEEEEEEeChH---------------HHHHHHHHhhh-cCCCccHH-H
Q 009523 329 -----PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHHV-LGGALNPN-A 386 (532)
Q Consensus 329 -----~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~---------------li~~l~~~~~~-~G~~~~~~-~ 386 (532)
+....++. ++|+++.|+||+++|+. ||+++++++ +.++++..... ..+.+... .
T Consensus 243 glv~~g~~~~~~~-~aDiv~~S~hK~l~Gp~---GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~i 318 (490)
T 2a7v_A 243 GLVAAKVIPSPFK-HADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAI 318 (490)
T ss_dssp HHHHTTSSCCGGG-TCSEEEEESSGGGCSCS---CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHH
T ss_pred ccccCCcCCCCCC-CCCEEEECCcccCcccc---chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHH
Confidence 22234444 79999999999998763 788888653 45566554321 11122222 1
Q ss_pred HHH--HHH-hH-HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009523 387 AYL--IIR-GM-KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 462 (532)
Q Consensus 387 a~l--~l~-~l-~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~ 462 (532)
+.+ ++. .+ +.+..+.++..+|++++++.|.+. ++. +..++. -..++++.+.........
T Consensus 319 aAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~-v~~~~t---------------~t~lv~vdl~~~g~~~~~ 381 (490)
T 2a7v_A 319 AAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYS-LVSGGT---------------DNHLVLVDLRPKGLDGAR 381 (490)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCE-EGGGSC---------------SSSEEEEECTTTTCCHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcE-EecCCC---------------CCeEEEEEeCCCCCCHHH
Confidence 221 111 11 234566778889999999999885 442 221211 134788887632112233
Q ss_pred HHHHcCCCceeecCC
Q 009523 463 FIDALKIPYIAPSFG 477 (532)
Q Consensus 463 ~l~~L~~~~i~vs~G 477 (532)
+.+.|+..+|.++.+
T Consensus 382 ~~~~L~~~GI~v~~~ 396 (490)
T 2a7v_A 382 AERVLELVSITANKN 396 (490)
T ss_dssp HHHHHHHTTEECEEE
T ss_pred HHHHHHhCCeEEecC
Confidence 444444457777654
No 188
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.85 E-value=4.4e-20 Score=193.74 Aligned_cols=214 Identities=17% Similarity=0.176 Sum_probs=147.4
Q ss_pred chhHHHHHHHHHhhh-CCC-------cE--EEeCCHHHHHHHH---HHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 200 NPTTVVVEEKMSALE-GAE-------ST--VIMASGMSASTVM---LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~-ga~-------~~--i~~sSG~~Ai~~a---l~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
.+...+|++++++++ |.+ +. +.+.+|++|+..+ +.+++++||+|+++.|+|.+... .++..|.
T Consensus 78 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~ 153 (409)
T 4eu1_A 78 VTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES----IFAKAGM 153 (409)
T ss_dssp TTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH----HHHHTTC
T ss_pred CCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH----HHHHcCC
Confidence 445678999999976 432 23 3467777777764 44567899999999999988654 3455688
Q ss_pred EEEEeCC-------CCHHHHHHhhc--CCCeeEEEEeCCCCCCCcccCHH---HHHHHHHhCCCEEEEECCCCCCCccc-
Q 009523 267 TATVIDP-------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQK- 333 (532)
Q Consensus 267 ~v~~vd~-------~dle~Le~al~--~~~tklV~lesP~NptG~v~dl~---~I~~la~~~gi~lIvDet~a~~~~~~- 333 (532)
++..++. .|+++|+++++ +.+++++++++|+||||.+.+.+ +|+++|+++|+++|+|++|.......
T Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~ 233 (409)
T 4eu1_A 154 ELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQL 233 (409)
T ss_dssp EEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCH
T ss_pred eEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCc
Confidence 8888764 17899999986 22577888899999999999855 58999999999999999987543211
Q ss_pred -----c---c-c-cCCcEEEECCccccCCCCCcEEEEE---EeChH----HHHHHHHHhhhcCCCccHHHHHHHHHhHH-
Q 009523 334 -----A---L-S-LGADLVLHSATKFIGGHNDVLAGSI---SGSGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK- 395 (532)
Q Consensus 334 -----~---l-~-~gaDivv~S~sK~lgg~gd~~gG~l---v~~~~----li~~l~~~~~~~G~~~~~~~a~l~l~~l~- 395 (532)
+ + . ....+++.|+||.+|.+|. ..|++ +++++ +++.++..........++..++++...++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 4eu1_A 234 DYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGH-RCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKD 312 (409)
T ss_dssp HHHTHHHHHHHTTSSCCEEEEECTTTSSCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHhhCCcEEEEecCcccccCccC-CceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCC
Confidence 1 1 1 1334889999999987664 45664 56677 55656554433333444555554444433
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 396 ---------TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 396 ---------tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.+....++..++++.+.+.|++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 313 PQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23344455667777888888775
No 189
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.85 E-value=1.4e-20 Score=199.94 Aligned_cols=269 Identities=12% Similarity=0.065 Sum_probs=175.1
Q ss_pred HHHHHHHHHhhhC------C--CcEEEeCCHHHHHHHHHHHh--------ccCCCEEEEcCCCCcchHHHHHHhcccCCc
Q 009523 203 TVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLAL--------VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 203 ~~~Le~~lA~l~g------a--~~~i~~sSG~~Ai~~al~al--------l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
..+||++||++++ . +++++++++++++.+++.++ +++||+|+++.|.|.+....+ +..|.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~----~~~g~ 177 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQT----KYFDK 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHH----HHSCB
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHH----HHcCC
Confidence 6789999999875 2 34555555669999999999 999999999999998765443 33455
Q ss_pred EEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEEC
Q 009523 267 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 345 (532)
Q Consensus 267 ~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S 345 (532)
++.... .|+++|++++++ ++++|++++|+||||.+++ + +++ ++..+.|+++..+ .....+..+.++++.|
T Consensus 178 ~~~~~~-~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S 248 (427)
T 2hox_A 178 KGYVWA-GNAANYVNVSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFT 248 (427)
T ss_dssp TTEEEE-EEGGGGTTCSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEE
T ss_pred eeeeec-CCHHHHHHhhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCccccCCCceEEEEe
Confidence 443332 367888888876 6999999999999999999 4 233 5678999986432 1111222567999999
Q ss_pred CccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH---------------HHHHHHHHHHHH
Q 009523 346 ATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL---------------HLRVQQQNSTAL 409 (532)
Q Consensus 346 ~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~tl---------------~~r~~~~~~~a~ 409 (532)
+||.+|.+| .+.|++++ ++++++.++..........+...+.++...++.. ....++..++.+
T Consensus 249 ~SK~~g~~G-~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
T 2hox_A 249 MSKFTGHSG-SRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWV 327 (427)
T ss_dssp HHHHTSCGG-GCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHH
T ss_pred ChhcCCCCC-ceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHH
Confidence 999998665 45788888 5899999888766554455666555554444432 122344556777
Q ss_pred HHHHHHHhCCCceEEeC--CCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 410 RMAKILEAHPKVKRVHY--PGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~--Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
.+.+.|++.+++....+ |. +...+.-.....|.++|+.++.+. +....+++ ..++.+..|..+.
T Consensus 328 ~l~~~L~~~~g~~~~~~~~~~-----~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~---~~gI~v~pg~~f~----- 394 (427)
T 2hox_A 328 NITALLDQSDRFSYQELPQSE-----YCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQ---NGRINTQNGVGFE----- 394 (427)
T ss_dssp HHHHHHTTSSSEECCCCCSCE-----EETTTTEEECCCCSEEEEEECSGGGCSHHHHHH---HTTEECEEGGGGT-----
T ss_pred HHHHHHHhCcCcccccccccc-----ccccccccCCCCceEEEEECCCcHHHHHHHHHH---HCCEEEcCCCccC-----
Confidence 88888887765521001 11 000000001224678899997421 12233332 3467776664321
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGV 515 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ 515 (532)
..+++||||++.
T Consensus 395 -----------------~~~~~~Ris~~~ 406 (427)
T 2hox_A 395 -----------------ASSRYVRLSLIK 406 (427)
T ss_dssp -----------------SCTTEEEEECSS
T ss_pred -----------------CCCCEEEEEecC
Confidence 125799999996
No 190
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.85 E-value=2.9e-20 Score=193.59 Aligned_cols=213 Identities=15% Similarity=0.101 Sum_probs=145.1
Q ss_pred hhHHHHHHHHHhhh-CC----CcEEE--eCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 201 PTTVVVEEKMSALE-GA----ESTVI--MASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 201 p~~~~Le~~lA~l~-ga----~~~i~--~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
....+|++++++++ +. +++++ +++|++|+.+++..+.. +||+|+++.|+|++.... +...|.++..+
T Consensus 69 ~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~ 144 (394)
T 2ay1_A 69 SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSI----MNFMGLPVQTY 144 (394)
T ss_dssp SCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHH----HHHHTCCEEEE
T ss_pred CCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCceEEE
Confidence 44678999999986 43 45666 78888999999887754 999999999999986543 34457777776
Q ss_pred CC---C----CHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCCCCCc--------
Q 009523 272 DP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------- 331 (532)
Q Consensus 272 d~---~----dle~Le~al~~~--~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a~~~~-------- 331 (532)
+. + |+++|++++++. +++++++++|+||||.+++ +++|.++|+++|+++|+|++|.....
T Consensus 145 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 224 (394)
T 2ay1_A 145 RYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAG 224 (394)
T ss_dssp ECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHH
T ss_pred ecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHH
Confidence 65 2 799999998753 3678888999999999987 55789999999999999999875432
Q ss_pred cccc-ccC-CcEEEECCccccCCCCCcEEEEEEe---ChHHHHHHH----HHhhhcCCCccHHHHHHHHHhHH-------
Q 009523 332 QKAL-SLG-ADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMK------- 395 (532)
Q Consensus 332 ~~~l-~~g-aDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~----~~~~~~G~~~~~~~a~l~l~~l~------- 395 (532)
...+ ..+ .++++.|+||.+|.+| ...|++++ ++++++.+. ..........++..++.+...++
T Consensus 225 ~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 303 (394)
T 2ay1_A 225 TRLIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRAD 303 (394)
T ss_dssp HHHHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHH
T ss_pred HHHHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHH
Confidence 1111 123 3478999999998655 35688877 666554432 22222122224444444444333
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 396 ---TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 396 ---tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.+....++..++++.+.+.|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 304 WMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22333344456666777777654
No 191
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.85 E-value=3.4e-19 Score=190.60 Aligned_cols=289 Identities=14% Similarity=0.106 Sum_probs=187.0
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHHh--
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 260 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~--------~Gd~VIv~~~~y~~t~~~~~~~-- 260 (532)
+.+.++.++...+|+++|+++.+. +.+++++||++|+..+++.+.+ ++++||+.++.|++........
T Consensus 86 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 165 (459)
T 4a6r_A 86 NTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGG 165 (459)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcC
Confidence 455678899999999999999854 6788889999999999998875 5789999999999853222111
Q ss_pred -------cccCCcEEEEeCCC---------C--------HHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHH
Q 009523 261 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 309 (532)
Q Consensus 261 -------l~~~Gv~v~~vd~~---------d--------le~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I 309 (532)
.......+..++.. | +++|++++++ .++++|++|.++|++|.+.+ +++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l 245 (459)
T 4a6r_A 166 MKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEI 245 (459)
T ss_dssp CTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred ChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 01111123334311 2 7888888862 36889999888888888887 9999
Q ss_pred HHHHHhCCCEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH---HhhhcCC
Q 009523 310 SDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHHVLGG 380 (532)
Q Consensus 310 ~~la~~~gi~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~---~~~~~G~ 380 (532)
.++|++||+++|+||++.... .........|+++ ++|.+++++ ...|++++++++++.+.. .......
T Consensus 246 ~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t--~sK~l~gg~-~~lg~v~~~~~i~~~~~~~~~~~~~~t~ 322 (459)
T 4a6r_A 246 ERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFT--AAKGLSSGY-LPIGAVFVGKRVAEGLIAGGDFNHGFTY 322 (459)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--hhhhhcCCC-CCccceeeCHHHHHHhhcCCCcccCCCC
Confidence 999999999999999976321 1122234467775 679998753 346888899999988872 1211122
Q ss_pred CccHHHHHHHHHhHHHHH--HHHHHHH-HHHHHHHHHH----HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEE
Q 009523 381 ALNPNAAYLIIRGMKTLH--LRVQQQN-STALRMAKIL----EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 453 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~--~r~~~~~-~~a~~la~~L----~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l 453 (532)
..++..+..++..++.+. ..+++.. ++.+++.+.| .++|.+..+ ++.|.+++|++
T Consensus 323 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~------------------~~~g~~~~~~~ 384 (459)
T 4a6r_A 323 SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV------------------RGVGMVQAFTL 384 (459)
T ss_dssp CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE------------------EEETTEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EEEEEEEEEEE
Confidence 346777776666666442 2234444 4555555555 333433322 23578889988
Q ss_pred cCCH----------HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHH
Q 009523 454 DGDL----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFE 519 (532)
Q Consensus 454 ~g~~----------~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~ 519 (532)
..+. .....+.+.+...++.+..+ .+.|||+..+ |+.+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----------------------------g~~iRi~~~~~~t~e~i~ 436 (459)
T 4a6r_A 385 VKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC----------------------------GDHIVSAPPLVMTRAEVD 436 (459)
T ss_dssp CSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE----------------------------TTEEEECCCTTCCHHHHH
T ss_pred ecCccccccccchHHHHHHHHHHHHHCCeEEecC----------------------------CCEEEEECCCCCCHHHHH
Confidence 6421 12445555554445443321 1689999654 3455
Q ss_pred HHHHHHHHHHh
Q 009523 520 DLKADVLQALH 530 (532)
Q Consensus 520 dli~dL~~AL~ 530 (532)
++++.|+++|+
T Consensus 437 ~~l~~l~~~l~ 447 (459)
T 4a6r_A 437 EMLAVAERCLE 447 (459)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56666666654
No 192
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.85 E-value=1.9e-19 Score=190.30 Aligned_cols=290 Identities=12% Similarity=0.107 Sum_probs=185.7
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc----------
Q 009523 196 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL---------- 261 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l---------- 261 (532)
..|.++...+++++|+++++. +++++++||++|+..+++.+. ..+|+||+.++.|++.........
T Consensus 80 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 159 (433)
T 1zod_A 80 SEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGP 159 (433)
T ss_dssp TTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCC
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCC
Confidence 456778889999999999974 567888899999999998653 346899999999987432211110
Q ss_pred ccCCcEEEEeCC------C---------CHHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCE
Q 009523 262 PKMGITATVIDP------A---------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 319 (532)
Q Consensus 262 ~~~Gv~v~~vd~------~---------dle~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~ 319 (532)
...|+....++. . |+++|++++++ .++++|+++.++||+|.+.+ +++|.++|++||++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 239 (433)
T 1zod_A 160 AAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGML 239 (433)
T ss_dssp CCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCE
T ss_pred CCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCE
Confidence 012444333321 1 38899998862 36888888766688998776 99999999999999
Q ss_pred EEEECCCCCCCc------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHH
Q 009523 320 VCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLII 391 (532)
Q Consensus 320 lIvDet~a~~~~------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~~~~~a~l~l 391 (532)
+|+||++..... .+......|++ |++|.+++ | ...|++++++++++.+...... .....++..+..+.
T Consensus 240 li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~ 315 (433)
T 1zod_A 240 LILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA-G-LPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGL 315 (433)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT-T-SSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHH
T ss_pred EEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccC-C-CCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHH
Confidence 999999874211 12223345665 68899997 4 4678999999998888653211 11234666666555
Q ss_pred HhHHHHH--HHHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HH
Q 009523 392 RGMKTLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LT 458 (532)
Q Consensus 392 ~~l~tl~--~r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------~~ 458 (532)
..++.+. ...++..++.+++.+.|++ +|.+..+ ++.|.++++++++. ..
T Consensus 316 aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~ 377 (433)
T 1zod_A 316 RVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDV------------------RGRGLLLGVEIVKDRRTKEPADG 377 (433)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEEEETTTTEECTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCChH
Confidence 5555432 2334455566666666654 2332211 23477889988631 12
Q ss_pred HHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 459 ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 459 ~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
....+.+.+...++.+..|+. .+ .++.|||+++.. +.+++++.|+++++
T Consensus 378 ~~~~~~~~l~~~Gv~v~~~~~----------------------~~-~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 378 LGAKITRECMNLGLSMNIVQL----------------------PG-MGGVFRIAPPLTVSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp HHHHHHHHHHHTTEECCEECC----------------------TT-SCCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEeccCC----------------------CC-CCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 345566666555666554421 01 147899987653 34455555555554
No 193
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.85 E-value=3.8e-19 Score=190.27 Aligned_cols=291 Identities=12% Similarity=0.081 Sum_probs=188.1
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHHh--
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 260 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~--------~Gd~VIv~~~~y~~t~~~~~~~-- 260 (532)
+.+.++.++...+|+++|+++.+. +.+++++||++|+..+++.+.. ++++||+.++.|++........
T Consensus 87 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 166 (460)
T 3gju_A 87 HAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTG 166 (460)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCC
T ss_pred ccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccC
Confidence 445567888999999999998753 5788899999999999988764 4689999999998854222111
Q ss_pred -------cccCCcEEEEeC--C----CC------------HHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHH
Q 009523 261 -------LPKMGITATVID--P----AD------------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKL 308 (532)
Q Consensus 261 -------l~~~Gv~v~~vd--~----~d------------le~Le~al~~---~~tklV~lesP~NptG~v~d----l~~ 308 (532)
.......+..++ . +| +++|++++++ .++++|++|+++|++|.+.+ +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~ 246 (460)
T 3gju_A 167 LDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEK 246 (460)
T ss_dssp CGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred CcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHH
Confidence 111112233333 1 22 6889988862 26899999998899998776 999
Q ss_pred HHHHHHhCCCEEEEECCCCCCCc------ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-------h
Q 009523 309 VSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H 375 (532)
Q Consensus 309 I~~la~~~gi~lIvDet~a~~~~------~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~ 375 (532)
|.++|++||+++|+||++..... ........|+++ ++|.++++. ...|++++++++++.+... .
T Consensus 247 l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~l~gG~-~~lg~v~~~~~i~~~~~~~~~~~~~~~ 323 (460)
T 3gju_A 247 IQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLIT--IAKGLTSAY-APLSGVIVADRVWQVLVQGSDKLGSLG 323 (460)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTS-SCCEEEEEEHHHHHHHHHHHHHHCSCS
T ss_pred HHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--eehhhcCCC-CCeEEEEECHHHHHHHhcccccccccc
Confidence 99999999999999999764211 122233456665 779998742 3468888999998888532 1
Q ss_pred hhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHH----HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEE
Q 009523 376 HVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKIL----EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVV 449 (532)
Q Consensus 376 ~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L----~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~v 449 (532)
.......++..++.++..++.+. ..+++..++.+++.+.| .++|.+..+ ++.|.++
T Consensus 324 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~------------------~~~g~~~ 385 (460)
T 3gju_A 324 HGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV------------------RGDGMLA 385 (460)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------eeeeEEE
Confidence 11223346777777666666432 22344445555555544 344443322 2357789
Q ss_pred EEEEcCCH----------HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----
Q 009523 450 SFEVDGDL----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---- 515 (532)
Q Consensus 450 sf~l~g~~----------~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~---- 515 (532)
++++..+. .....+.+.+...++.+..++ .++.|||+..+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------------------------~~~~iRi~~~~~~t~ 439 (460)
T 3gju_A 386 AVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP--------------------------QGDILGFAPPLCLTR 439 (460)
T ss_dssp EEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS--------------------------SSCEEEECCCTTCCH
T ss_pred EEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC--------------------------CCCEEEEECCCCCCH
Confidence 99886421 124455555544455443321 14789999664
Q ss_pred CCHHHHHHHHHHHHh
Q 009523 516 EDFEDLKADVLQALH 530 (532)
Q Consensus 516 ed~~dli~dL~~AL~ 530 (532)
|+.+++++.|+++|+
T Consensus 440 e~i~~~l~~l~~~l~ 454 (460)
T 3gju_A 440 EQADIVVSKTADAVK 454 (460)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 445566666666664
No 194
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.85 E-value=1.5e-19 Score=196.39 Aligned_cols=222 Identities=13% Similarity=0.124 Sum_probs=158.8
Q ss_pred CCchhHHHHHHH----HHhhhCCC----cEEEeCCHHHHHHHHHHHhcc--------------CCCEEEEcCCCCcchHH
Q 009523 198 YGNPTTVVVEEK----MSALEGAE----STVIMASGMSASTVMLLALVP--------------AGGHIVTTTDCYRKTRI 255 (532)
Q Consensus 198 ~~~p~~~~Le~~----lA~l~ga~----~~i~~sSG~~Ai~~al~all~--------------~Gd~VIv~~~~y~~t~~ 255 (532)
...|...++|+. +++++|.+ ..+++++|++|+..++.++.. +++.|+++...|.+...
T Consensus 128 ~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~ 207 (511)
T 3vp6_A 128 EIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKK 207 (511)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHH
Confidence 356777776665 46667764 568888999999888877654 57799999999988654
Q ss_pred HHHHhcccCCc---EEEEeCCC-----CHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 256 FIETVLPKMGI---TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 256 ~~~~~l~~~Gv---~v~~vd~~-----dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
.. ...|+ +++.++.+ |+++|+++|++. ++++|++++|+|++|.+.|+++|+++|++||+++++
T Consensus 208 ~~----~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhv 283 (511)
T 3vp6_A 208 AG----AALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHV 283 (511)
T ss_dssp HH----HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEE
T ss_pred HH----HHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEE
Confidence 43 33444 67777654 899999999752 189999999999999999999999999999999999
Q ss_pred ECCCCCCCcccc----c---ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh--h----------------
Q 009523 323 DGTFATPLNQKA----L---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--V---------------- 377 (532)
Q Consensus 323 Det~a~~~~~~~----l---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~---------------- 377 (532)
|++++.+....+ . ..++|+++.++||+++++.+ .+++++.+++++........ .
T Consensus 284 D~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g-~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 362 (511)
T 3vp6_A 284 DAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ-CSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDK 362 (511)
T ss_dssp EETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC-CEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGG
T ss_pred EccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC-eEEEEEeCHHHHHHHhccCCccccCcccccccccCccCC
Confidence 999876543211 1 13579999999999987643 24444555555554321100 0
Q ss_pred ---cCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009523 378 ---LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 424 (532)
Q Consensus 378 ---~G~~~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V 424 (532)
.+........|.+++ +.+.+..++++..++++++.+.|++.|+++.+
T Consensus 363 ~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~ 414 (511)
T 3vp6_A 363 AIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMV 414 (511)
T ss_dssp SSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEES
T ss_pred CCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 011123444555444 44567788889999999999999998887543
No 195
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.84 E-value=2.8e-19 Score=189.04 Aligned_cols=295 Identities=13% Similarity=0.092 Sum_probs=180.5
Q ss_pred CCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHHhcc---
Q 009523 196 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLP--- 262 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all--------~~Gd~VIv~~~~y~~t~~~~~~~l~--- 262 (532)
.++.++...+|+++|+++.+. +++++++||++|+..+++.+. .+||+||+.++.|++........-.
T Consensus 67 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 146 (430)
T 3i4j_A 67 SQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGA 146 (430)
T ss_dssp TTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC----------------
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccc
Confidence 367888999999999999964 678888899999999998876 3478999999999875422111100
Q ss_pred ------cCCc--EEEEeCCC--------CHHHHHHhhcC---CCeeEEEEeCCCC-CCCcccC----HHHHHHHHHhCCC
Q 009523 263 ------KMGI--TATVIDPA--------DMEGLEAALNN---NNVSLFFTESPTN-PFLRCVD----VKLVSDLCHKKGA 318 (532)
Q Consensus 263 ------~~Gv--~v~~vd~~--------dle~Le~al~~---~~tklV~lesP~N-ptG~v~d----l~~I~~la~~~gi 318 (532)
.... .+..++.. |+++|++++++ .++++|+++.++| ++|.+.+ +++|.++|++||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~ 226 (430)
T 3i4j_A 147 RRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGI 226 (430)
T ss_dssp ---------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTC
T ss_pred cccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCC
Confidence 0000 22334433 34888888862 3688899988888 9998887 9999999999999
Q ss_pred EEEEECCCCCCC------ccccc-ccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH----hhhcCCCccHHHH
Q 009523 319 IVCIDGTFATPL------NQKAL-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGALNPNAA 387 (532)
Q Consensus 319 ~lIvDet~a~~~------~~~~l-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~G~~~~~~~a 387 (532)
++|+||+|.... ..... ....|+++ ++|.+++ |-...|++++++++++.+... ........++..+
T Consensus 227 ~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~ 303 (430)
T 3i4j_A 227 IFIADEVMSGMGRCGSPLALSRWSGVTPDIAV--LGKGLAA-GYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSV 303 (430)
T ss_dssp EEEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT-TSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHH
T ss_pred EEEEechhhCCCcccchhhhhhhcCCCCcEEE--EcccccC-CccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHH
Confidence 999999976431 11222 33356664 7899986 314568889999999888763 2222234567776
Q ss_pred HHHHHhHHHHH--HHHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----
Q 009523 388 YLIIRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----- 456 (532)
Q Consensus 388 ~l~l~~l~tl~--~r~~~~~~~a~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~----- 456 (532)
..++..++.+. ..+++..++.+++.+.|+ ++|.+..+ ++.|.++++++.+.
T Consensus 304 aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~ 365 (430)
T 3i4j_A 304 AAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV------------------RGTGLLLGVVLGDLATGQA 365 (430)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEC-------
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEeccccccCC
Confidence 66666666432 223444455555555554 44544322 22477889988531
Q ss_pred ---HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Q 009523 457 ---LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQAL 529 (532)
Q Consensus 457 ---~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL 529 (532)
...+..+.+.+...++.+..+... . .|..++.+||++++ |+.+++++.|+++|
T Consensus 366 ~~~~~~~~~~~~~l~~~Gv~v~~~~~~------~--------------~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 425 (430)
T 3i4j_A 366 FETPGIASRIGAAALKRGLITYPGSGA------E--------------PNGRGDHLLLGPPLSITAAEVDGLLALLAGAL 425 (430)
T ss_dssp -----CHHHHHHHHHHTTEECC-------------------------------CEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhCCCEEEecccc------c--------------CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 111245556555556655443210 0 12235789999774 44556666666666
Q ss_pred hh
Q 009523 530 HA 531 (532)
Q Consensus 530 ~~ 531 (532)
++
T Consensus 426 ~~ 427 (430)
T 3i4j_A 426 ED 427 (430)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 196
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.84 E-value=6.9e-20 Score=196.29 Aligned_cols=290 Identities=12% Similarity=0.096 Sum_probs=190.7
Q ss_pred CCCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc-------CCC-EEEEcCCCCcchHHHHHHh---
Q 009523 194 EYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AGG-HIVTTTDCYRKTRIFIETV--- 260 (532)
Q Consensus 194 ~Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~-------~Gd-~VIv~~~~y~~t~~~~~~~--- 260 (532)
.++++.++...+|+++|+++.+. +.+++++||++|+..+++.+.+ +|+ +||+.++.|++........
T Consensus 111 ~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~ 190 (457)
T 3tfu_A 111 MFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDP 190 (457)
T ss_dssp CSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCC
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCC
Confidence 34778889999999999999963 6788999999999999988765 554 8999999998743211111
Q ss_pred -------cccCCcEEEEeCC-------CCHHHHHHhhc---CCCeeEEEEeC-CCCCCCcccC----HHHHHHHHHhCCC
Q 009523 261 -------LPKMGITATVIDP-------ADMEGLEAALN---NNNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGA 318 (532)
Q Consensus 261 -------l~~~Gv~v~~vd~-------~dle~Le~al~---~~~tklV~les-P~NptG~v~d----l~~I~~la~~~gi 318 (532)
.......+.+++. .|+++|+++++ + ++++|++|+ ++|++|.+.+ +++|.++|++||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~-~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gi 269 (457)
T 3tfu_A 191 HGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG-ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEV 269 (457)
T ss_dssp C----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG-GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTC
T ss_pred cccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC-CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 1111112233332 37899999987 4 699999999 9999999886 9999999999999
Q ss_pred EEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-----hhhcCCCccHHHH
Q 009523 319 IVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGALNPNAA 387 (532)
Q Consensus 319 ~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-----~~~~G~~~~~~~a 387 (532)
++|+||++.... .........|++ |++|.++|+. ...|++++++++++.+... ........++..+
T Consensus 270 llI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG~-~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~ 346 (457)
T 3tfu_A 270 LLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGGY-LSLAATLCTADVAHTISAGAAGALMHGPTFMANPLAC 346 (457)
T ss_dssp EEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTS-SCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHH
T ss_pred EEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhhCCC-cceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHH
Confidence 999999975321 122233456777 6889998742 3478889999998887521 1111223567777
Q ss_pred HHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009523 388 YLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 465 (532)
Q Consensus 388 ~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~ 465 (532)
..++..++.+. ...++..++.+++.+.|++.. .+|.+. ..++.|.+++|+++.. .....+.+
T Consensus 347 aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~v~----------~vr~~G~~~~i~l~~~-~~~~~~~~ 410 (457)
T 3tfu_A 347 AVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-----ALPAVT----------DVRVCGAIGVIECDRP-VDLAVATP 410 (457)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-----GSTTEE----------EEEECSSCEEEEESSC-CCHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----cCCCee----------eeecCCeEEEEEECCc-ccHHHHHH
Confidence 77776776543 224455566667777776531 112110 1133578899999753 12345555
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
.|...++.+.. ..+.|||+..+ |+.+++++.|++++++
T Consensus 411 ~l~~~Gv~v~~----------------------------~~~~lRi~p~~~~t~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 411 AALDRGVWLRP----------------------------FRNLVYAMPPYICTPAEITQITSAMVEVARL 452 (457)
T ss_dssp HHHHTTEECCC----------------------------BTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEEe----------------------------cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 55444543321 13589998654 4456666666666654
No 197
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.84 E-value=1.5e-19 Score=203.57 Aligned_cols=218 Identities=12% Similarity=0.053 Sum_probs=158.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC----
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---- 273 (532)
+++...++|+.+|+++|++.++++++|+ +|+.+++.+++++||+|+++.++|.+.... .+...|+++++++.
T Consensus 171 ~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~ 247 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNP 247 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECT
T ss_pred ChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccc
Confidence 5567899999999999999888888887 899999999999999999999999886542 15556888777653
Q ss_pred ------CCHHHH-----HHhhcCCC-----e----eEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-
Q 009523 274 ------ADMEGL-----EAALNNNN-----V----SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ- 332 (532)
Q Consensus 274 ------~dle~L-----e~al~~~~-----t----klV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~- 332 (532)
.|+++| ++++++++ + ++|++++| |++|.+.|+++|+++|+++|+++++|++++..+.+
T Consensus 248 ~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~ 326 (730)
T 1c4k_A 248 YGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFI 326 (730)
T ss_dssp TCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSS
T ss_pred cCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccC
Confidence 267777 99887631 4 89999998 58999999999999999999999999998753211
Q ss_pred ------ccccc---CCc----EEEECCccccCCCCCcEEEEEEeChHHH---------HHHHHHhhhc-CCCccHHHHHH
Q 009523 333 ------KALSL---GAD----LVLHSATKFIGGHNDVLAGSISGSGKLV---------TQIRNLHHVL-GGALNPNAAYL 389 (532)
Q Consensus 333 ------~~l~~---gaD----ivv~S~sK~lgg~gd~~gG~lv~~~~li---------~~l~~~~~~~-G~~~~~~~a~l 389 (532)
.++.. |+| +++.|+||+++|+. .+|+++.+++.+ ..+......+ .+.++......
T Consensus 327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~--~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaa 404 (730)
T 1c4k_A 327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAA 404 (730)
T ss_dssp GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred cccCCcCcccccccCCCCCCEEEEECCCCCCCCCC--CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHH
Confidence 23333 788 99999999999875 367775433221 2333322222 23333332222
Q ss_pred HHHhHH-----HHHHHHHHHHHHHHHHHHHHHh-CCCce
Q 009523 390 IIRGMK-----TLHLRVQQQNSTALRMAKILEA-HPKVK 422 (532)
Q Consensus 390 ~l~~l~-----tl~~r~~~~~~~a~~la~~L~~-~p~v~ 422 (532)
+..+++ ....++++..++++++.+.|++ .+++.
T Consensus 405 l~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 405 LDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 222222 2345667788889999999988 57764
No 198
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.84 E-value=8.5e-20 Score=193.36 Aligned_cols=259 Identities=14% Similarity=0.153 Sum_probs=175.4
Q ss_pred CCCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHHhc----------cc
Q 009523 197 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL----------PK 263 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~-ga~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~~~~~~l----------~~ 263 (532)
.+.++...+++++|+++. +.+.+++++||++|+.++++.. +.++++||+.++.|++......... ..
T Consensus 92 ~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~ 171 (434)
T 2epj_A 92 GAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTS 171 (434)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESS
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCC
Confidence 457888999999999999 6778899999999999999862 3456788888899987432110000 01
Q ss_pred CCc------EEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc
Q 009523 264 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 331 (532)
Q Consensus 264 ~Gv------~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~ 331 (532)
.|+ .+..++..|+++|++++++ .++++|+++..+|++|.+.| +++|.++|++||+++|+||++.....
T Consensus 172 ~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~ 251 (434)
T 2epj_A 172 AGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL 251 (434)
T ss_dssp TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS
T ss_pred CCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC
Confidence 243 3555666799999999873 26889999877788999998 99999999999999999999873311
Q ss_pred -----ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcCC--CccHHHHHHHHHhHHHHH--HHH
Q 009523 332 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTLH--LRV 401 (532)
Q Consensus 332 -----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~--~~~~~~a~l~l~~l~tl~--~r~ 401 (532)
........|++ |++|.+++ | ..+|++++++++++.+..... ..+. ..++..+..+...++.+. ...
T Consensus 252 g~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~ 327 (434)
T 2epj_A 252 GLEGAQGYFNIEGDII--VLGKIIGG-G-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVY 327 (434)
T ss_dssp STTHHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHH
T ss_pred CcchhhHHhCCCCCee--eecchhcC-C-cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence 11123346765 68899997 3 457899999888776654211 1222 356777666666666543 234
Q ss_pred HHHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------------HHHHHHHHH
Q 009523 402 QQQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFID 465 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------------~~~~~~~l~ 465 (532)
++..++.+++.+.|++. +.+..+ ++.|.+++++++.. ......+.+
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (434)
T 2epj_A 328 SVSREAAKALEEAASEVLDRTGLPYTI------------------NRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHE 389 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEE------------------EEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcEEE------------------EEeeeEEEEEEeCCCcccchhccccCHHHHHHHHH
Confidence 55556667777766653 211111 23578999999741 234556777
Q ss_pred HcCCCceeecCC
Q 009523 466 ALKIPYIAPSFG 477 (532)
Q Consensus 466 ~L~~~~i~vs~G 477 (532)
.|...++.+..|
T Consensus 390 ~l~~~Gv~v~~~ 401 (434)
T 2epj_A 390 EMLRRGVFIAPS 401 (434)
T ss_dssp HHHHTTEECCSS
T ss_pred HHHHCCeEEecc
Confidence 666557666554
No 199
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.84 E-value=9.2e-20 Score=196.28 Aligned_cols=245 Identities=15% Similarity=0.164 Sum_probs=166.1
Q ss_pred chhHHHHHH----HHHhhhCCCc-----------EEEeCCHHHHHHHHHHHhccC---------CC--------E--EEE
Q 009523 200 NPTTVVVEE----KMSALEGAES-----------TVIMASGMSASTVMLLALVPA---------GG--------H--IVT 245 (532)
Q Consensus 200 ~p~~~~Le~----~lA~l~ga~~-----------~i~~sSG~~Ai~~al~all~~---------Gd--------~--VIv 245 (532)
.|....+|+ .+++++|.+. .+++++|++|+..++.++..+ || . |++
T Consensus 108 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~ 187 (486)
T 1js3_A 108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA 187 (486)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEE
Confidence 455555554 4567778652 688999999999888765321 43 3 788
Q ss_pred cCCCCcchHHHHHHhcccCCcEEEEeCCC-----CHHHHHHhhcCCCe------eEEEEeCCCCCCCcccCHHHHHHHHH
Q 009523 246 TTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNV------SLFFTESPTNPFLRCVDVKLVSDLCH 314 (532)
Q Consensus 246 ~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-----dle~Le~al~~~~t------klV~lesP~NptG~v~dl~~I~~la~ 314 (532)
+.+.|.+... .+...|++++.++.+ |+++|++++++ ++ .+|++++|+||+|.+.|+++|+++|+
T Consensus 188 s~~~h~s~~~----~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~ 262 (486)
T 1js3_A 188 SDQAHSSVER----AGLIGGVKLKAIPSDGKFAMRASALQEALER-DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262 (486)
T ss_dssp ETTCCHHHHH----HHHHHTCEEEEECCCTTSCCCHHHHHHHHHH-HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCcHHHHH----HHHhCCCceEEeecCCCCCCCHHHHHHHHHH-HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 9999987543 344568888888753 89999999976 34 38999999999999999999999999
Q ss_pred hCCCEEEEECCCCCCCccc----cc---ccCCcEEEECCccccCCCCCcEEEEEEeCh-HH-HHHHH---HHhhh-----
Q 009523 315 KKGAIVCIDGTFATPLNQK----AL---SLGADLVLHSATKFIGGHNDVLAGSISGSG-KL-VTQIR---NLHHV----- 377 (532)
Q Consensus 315 ~~gi~lIvDet~a~~~~~~----~l---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~l-i~~l~---~~~~~----- 377 (532)
++|+++++|++++.+.... .. -.++|.++.|+||+++++. .+|+++.++ .+ .+.+. .+...
T Consensus 263 ~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~--~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 340 (486)
T 1js3_A 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNF--DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS 340 (486)
T ss_dssp HTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESCHHHHHGGGC------------C
T ss_pred HcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCc--ceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence 9999999999987643211 11 1268999999999998653 257776654 33 23221 00000
Q ss_pred ------------cCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcC
Q 009523 378 ------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT 443 (532)
Q Consensus 378 ------------~G~~~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~ 443 (532)
.+........|.+++ +.+.+..++++..++++++.+.|++.|++..+..|
T Consensus 341 ~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---------------- 404 (486)
T 1js3_A 341 GLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEV---------------- 404 (486)
T ss_dssp CSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCC----------------
T ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC----------------
Confidence 111223445555444 34566777788889999999999998876533222
Q ss_pred CcccEEEEEEcCCHHHHHHHHHHcC
Q 009523 444 GFGGVVSFEVDGDLTATIKFIDALK 468 (532)
Q Consensus 444 g~G~~vsf~l~g~~~~~~~~l~~L~ 468 (532)
.++++.|.+++.......+.+.|.
T Consensus 405 -~~~~v~f~~~~~~~~~~~l~~~L~ 428 (486)
T 1js3_A 405 -TLGLVCFRLKGSDGLNEALLERIN 428 (486)
T ss_dssp -CSSEEEEEESSCHHHHHHHHHHHH
T ss_pred -ceeEEEEEecChHHHHHHHHHHHH
Confidence 245888888753222355666554
No 200
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=1.1e-19 Score=192.29 Aligned_cols=285 Identities=18% Similarity=0.175 Sum_probs=187.0
Q ss_pred CCCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHhc----------cc
Q 009523 197 RYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVL----------PK 263 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g-a~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~l----------~~ 263 (532)
.|+++...+|+++|+++++ .+++++++||++|+..+++.+.. ++++||+.++.|++......... ..
T Consensus 91 ~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 170 (434)
T 3l44_A 91 GTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDS 170 (434)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSS
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCc
Confidence 4678889999999999985 56788889999999999987654 78999999999987431110000 00
Q ss_pred CCc------EEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCC-
Q 009523 264 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL- 330 (532)
Q Consensus 264 ~Gv------~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~- 330 (532)
.++ .+..++.+|+++|++++++ .++++|++|+++|++|.+.+ +++|.++|++||++||+||++....
T Consensus 171 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~ 250 (434)
T 3l44_A 171 AGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRF 250 (434)
T ss_dssp TTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTS
T ss_pred CCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceec
Confidence 111 4555666799999999872 25889999888888888887 9999999999999999999986431
Q ss_pred ----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHh---hhcCCCccHHHHHHHHHhHHHHH--HHH
Q 009523 331 ----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLH--LRV 401 (532)
Q Consensus 331 ----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~~~~~~~a~l~l~~l~tl~--~r~ 401 (532)
.........|++ |++|.+++ | ...|++++++++++.+.... .......++..+..++..++.+. ..+
T Consensus 251 g~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~ 326 (434)
T 3l44_A 251 MYGGAQDLLGVTPDLT--ALGKVIGG-G-LPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLY 326 (434)
T ss_dssp SSSCHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHH
T ss_pred cccHHHHHcCCCCCee--ehhhhhcC-C-cCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHH
Confidence 112223345655 57899984 3 46788899999887765421 11123356776666666666432 234
Q ss_pred HHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC------------CHHHHHHHHH
Q 009523 402 QQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------------DLTATIKFID 465 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g------------~~~~~~~~l~ 465 (532)
++..++.+++.+.|++ ++.+..+ ++.|.++++++.. +......+.+
T Consensus 327 ~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (434)
T 3l44_A 327 EKLDELGATLEKGILEQAAKHNIDITL------------------NRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFK 388 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEE------------------EEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEE------------------EeeccEEEEEEecCcccchhhccccCHHHHHHHHH
Confidence 4555666666666654 2322211 2357899998842 1223455666
Q ss_pred HcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009523 466 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 530 (532)
Q Consensus 466 ~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~ 530 (532)
.|...++.+..|+ .+.+|+++.. |+.+.+++.|+++++
T Consensus 389 ~l~~~Gv~v~~~~---------------------------~~~~rl~~~~t~e~i~~~l~~l~~~l~ 428 (434)
T 3l44_A 389 LMLQEGVNLAPSK---------------------------YEAWFLTTEHTKEDIEYTIEAVGRAFA 428 (434)
T ss_dssp HHHHTTEECCSST---------------------------TCCEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEeecC---------------------------CCcEEEecccCHHHHHHHHHHHHHHHH
Confidence 6655565554432 2356776543 445666667766665
No 201
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.84 E-value=1.5e-19 Score=198.01 Aligned_cols=150 Identities=16% Similarity=0.282 Sum_probs=113.5
Q ss_pred cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-------CCHHHHHHhhcC
Q 009523 218 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN 285 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~a-----ll~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-------~dle~Le~al~~ 285 (532)
++++++++++++..++.+ ++++||+|++++|+|++..... .+...|+++..++. .|+++|++++++
T Consensus 167 ~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~ 244 (546)
T 2zy4_A 167 NLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP--ELAQYALEEVAINADPSLNWQYPDSELDKLKDP 244 (546)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH--HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST
T ss_pred eEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH--HHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC
Confidence 344444555999999887 5789999999999998865432 24455777777753 478899988866
Q ss_pred CCeeEEEEeCCCCCCCcccC---HHHHHHHH--HhCCCEEEEECCCCCCCc--ccccc--cCCcEEEECCccccCCCCCc
Q 009523 286 NNVSLFFTESPTNPFLRCVD---VKLVSDLC--HKKGAIVCIDGTFATPLN--QKALS--LGADLVLHSATKFIGGHNDV 356 (532)
Q Consensus 286 ~~tklV~lesP~NptG~v~d---l~~I~~la--~~~gi~lIvDet~a~~~~--~~~l~--~gaDivv~S~sK~lgg~gd~ 356 (532)
++++|++++|+||||.+++ +++|+++| +++|+++|+|++|..... ..... .+.++++.|+||.+|.+| .
T Consensus 245 -~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G-l 322 (546)
T 2zy4_A 245 -AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATG-W 322 (546)
T ss_dssp -TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGG-G
T ss_pred -CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCC-c
Confidence 7999999999999999998 45678888 789999999999875432 11111 246799999999998666 4
Q ss_pred EEEEEEeChH-HHHHH
Q 009523 357 LAGSISGSGK-LVTQI 371 (532)
Q Consensus 357 ~gG~lv~~~~-li~~l 371 (532)
+.|+++++++ +++.+
T Consensus 323 RiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 323 RLGVVAAHQQNVFDLA 338 (546)
T ss_dssp CEEEEEEESSCHHHHH
T ss_pred ceEEEEECCHHHHHHH
Confidence 5788888764 77665
No 202
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.84 E-value=2.2e-19 Score=189.84 Aligned_cols=258 Identities=14% Similarity=0.125 Sum_probs=170.5
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHH----------HhcccC
Q 009523 198 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 264 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g-a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~----------~~l~~~ 264 (532)
|+++...+|+++|+++.+ .+++++++||++|+..+++... ..+++||+.++.|++...... ......
T Consensus 90 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 169 (429)
T 4e77_A 90 APTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC
Confidence 578999999999999985 5678899999999999988543 356889999999988542110 000011
Q ss_pred C------cEEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC---
Q 009523 265 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 329 (532)
Q Consensus 265 G------v~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~--- 329 (532)
+ ..+..++..|+++|++++++ .++++|+++..++++|.+.+ +++|.++|++||+++|+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g 249 (429)
T 4e77_A 170 GVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA 249 (429)
T ss_dssp TSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB
T ss_pred CCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC
Confidence 1 23455667799999999873 25788888666666778887 999999999999999999998732
Q ss_pred --CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcC--CCccHHHHHHHHHhHHHH--HHHHH
Q 009523 330 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTL--HLRVQ 402 (532)
Q Consensus 330 --~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G--~~~~~~~a~l~l~~l~tl--~~r~~ 402 (532)
..........|++ |++|.+++ | ..+|++++++++++.+..... ..+ ...++..++.+...++.+ ...++
T Consensus 250 ~~~~~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 325 (429)
T 4e77_A 250 LAGAQDYYHVIPDLT--CLGKIIGG-G-MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYE 325 (429)
T ss_dssp TTCHHHHTTCCCSEE--EEEGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchHHHhcCCCCCee--eecccccC-C-CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 1122223345765 68899985 3 467899999988877654211 112 246777777777666654 23344
Q ss_pred HHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------------HHHHHHHHH
Q 009523 403 QQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------------LTATIKFID 465 (532)
Q Consensus 403 ~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~-------------~~~~~~~l~ 465 (532)
+..++.+++.+.|++ ++.+.. .++.|.+++++++.. ......+.+
T Consensus 326 ~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (429)
T 4e77_A 326 TLTELTDSLATGLRHAAKEENIPLV------------------VNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFH 387 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCE------------------EEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceE------------------EEEeeeEEEEEEccCcccccccccccccHHHHHHHHH
Confidence 555566666666654 222111 134678999998753 123456666
Q ss_pred HcCCCceeecCC
Q 009523 466 ALKIPYIAPSFG 477 (532)
Q Consensus 466 ~L~~~~i~vs~G 477 (532)
.|...++.+..+
T Consensus 388 ~l~~~Gi~v~~~ 399 (429)
T 4e77_A 388 LMLEEGVYLAPS 399 (429)
T ss_dssp HHHHTTEECCSS
T ss_pred HHHHCCeEEeec
Confidence 665556665544
No 203
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.83 E-value=4.5e-19 Score=188.90 Aligned_cols=296 Identities=14% Similarity=0.169 Sum_probs=190.4
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCCC-cEEEeCCHHHHHHHHHHHhc-----c---CCCEEEEcCCCCcchHHHHHHhc--
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGAE-STVIMASGMSASTVMLLALV-----P---AGGHIVTTTDCYRKTRIFIETVL-- 261 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga~-~~i~~sSG~~Ai~~al~all-----~---~Gd~VIv~~~~y~~t~~~~~~~l-- 261 (532)
+...++.++...+|+++|+++.+.+ ++++++||++|+..+++.+. . ++|+||+.++.|++........-
T Consensus 83 ~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~ 162 (452)
T 3n5m_A 83 YFPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQ 162 (452)
T ss_dssp CCCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCC
T ss_pred CcccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCc
Confidence 3334577889999999999998752 37888899999999999876 4 78999999999987432221110
Q ss_pred -------ccCCcEEEEeCC--------CC---------HHHHHHhhc---CCCeeEEEEeCC-CCCCCcccC----HHHH
Q 009523 262 -------PKMGITATVIDP--------AD---------MEGLEAALN---NNNVSLFFTESP-TNPFLRCVD----VKLV 309 (532)
Q Consensus 262 -------~~~Gv~v~~vd~--------~d---------le~Le~al~---~~~tklV~lesP-~NptG~v~d----l~~I 309 (532)
......+..++. +| +++|+++++ ..++++|++|++ +| +|.+.+ +++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l 241 (452)
T 3n5m_A 163 AQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAV 241 (452)
T ss_dssp GGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHH
T ss_pred hhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHH
Confidence 111112333432 23 899999987 236899999999 89 998887 9999
Q ss_pred HHHHHhCCCEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH---Hh---hh
Q 009523 310 SDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LH---HV 377 (532)
Q Consensus 310 ~~la~~~gi~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~---~~---~~ 377 (532)
.++|++||+++|+||++.... .........|+++ ++|.+++ |-...|++++++++++.+.. .. ..
T Consensus 242 ~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~ 318 (452)
T 3n5m_A 242 HETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIIT--MAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHI 318 (452)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCC
T ss_pred HHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEe--ecccccC-CCcceEEEEECHHHHHHHhhccCCCCcccc
Confidence 999999999999999976321 1222233456664 7899986 31356888889888887643 11 11
Q ss_pred cCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEE
Q 009523 378 LGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 451 (532)
Q Consensus 378 ~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf 451 (532)
.....++..+..++..++.+. ..+++..++.+++.+.|++ +|.+..+ ++.|.++++
T Consensus 319 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~i 380 (452)
T 3n5m_A 319 NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDI------------------RGKGLLVGI 380 (452)
T ss_dssp CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE------------------EESSSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EEEEEEEEE
Confidence 123356777776666666442 2244455555666665543 3433222 235678888
Q ss_pred EEcCC--------HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHH
Q 009523 452 EVDGD--------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFE 519 (532)
Q Consensus 452 ~l~g~--------~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~ 519 (532)
++..+ ......+.+.+...|+.+..++.+. + -.++.|||+++.. +.+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~----~-----------------~~~~~iRi~~~~~~t~e~i~ 439 (452)
T 3n5m_A 381 ELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT----A-----------------GYNNILTLAPPLVISSEEIA 439 (452)
T ss_dssp EEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS----T-----------------TCCCEEEECCCTTCCHHHHH
T ss_pred EEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc----C-----------------CCCCEEEEECCCCCCHHHHH
Confidence 87421 1233455665555566665543211 0 1257999987653 455
Q ss_pred HHHHHHHHHHhh
Q 009523 520 DLKADVLQALHA 531 (532)
Q Consensus 520 dli~dL~~AL~~ 531 (532)
++++.|+++|++
T Consensus 440 ~~l~~l~~~l~~ 451 (452)
T 3n5m_A 440 FVIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 556666666654
No 204
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.83 E-value=2.9e-19 Score=190.40 Aligned_cols=286 Identities=14% Similarity=0.119 Sum_probs=178.3
Q ss_pred CCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc----CC----CEEEEcCCCCcchHHHHHHh-----
Q 009523 196 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP----AG----GHIVTTTDCYRKTRIFIETV----- 260 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~----~G----d~VIv~~~~y~~t~~~~~~~----- 260 (532)
.++.++...+|+++|+++.+ .+.+++++||++|+..+++.+.. +| |+||+.++.|++........
T Consensus 82 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 161 (448)
T 3dod_A 82 LGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIEL 161 (448)
T ss_dssp SSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC------------------
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCcc
Confidence 55778889999999999985 36788999999999999988765 45 99999999998743211100
Q ss_pred ----cccCCcEEEEeCCC----------------CHHHHHHhhc--CCCeeEEEEeCCC-CCCCcccC----HHHHHHHH
Q 009523 261 ----LPKMGITATVIDPA----------------DMEGLEAALN--NNNVSLFFTESPT-NPFLRCVD----VKLVSDLC 313 (532)
Q Consensus 261 ----l~~~Gv~v~~vd~~----------------dle~Le~al~--~~~tklV~lesP~-NptG~v~d----l~~I~~la 313 (532)
.......+..++.. |+++|+++++ +.++++|++|+++ |++|.+.+ +++|.++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 162 FHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp -----------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred ccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 00001122333332 3788999886 2368999999998 99998876 99999999
Q ss_pred HhCCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH-------HhhhcCC
Q 009523 314 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-------LHHVLGG 380 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-------~~~~~G~ 380 (532)
++||++||+||++... +.........|+++ ++|.+++ |....|++++++++++.+.. .......
T Consensus 242 ~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t--~sK~l~~-G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~ 318 (448)
T 3dod_A 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMA--AGKGITG-GYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSY 318 (448)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGT-TSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTT
T ss_pred HHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEE--ecccccC-CcCceEEEEECHHHHHHhhhccccCCcccccCCC
Confidence 9999999999997632 11222233456664 7899986 32357889999988887754 2221223
Q ss_pred CccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh---CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 381 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 381 ~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~---~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
..++..+..++..++.+. ..+++..++.+++.+.|++ +|.+..+ ++.|.++++++..
T Consensus 319 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~------------------~~~g~~~~~~~~~ 380 (448)
T 3dod_A 319 TGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI------------------RQLGFMCGAELVR 380 (448)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEEEEEECS
T ss_pred CcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EeeeEEEEEEEcc
Confidence 346777777676776542 2244555566666666654 3322221 2357799999864
Q ss_pred CHH----------HHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHH
Q 009523 456 DLT----------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDL 521 (532)
Q Consensus 456 ~~~----------~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dl 521 (532)
+.. ....+.+.+...|+.+..+ .+.|||+..+ |+.++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------~~~iRi~~~~~~t~e~i~~~ 432 (448)
T 3dod_A 381 SKETKEPYPADRRIGYKVSLKMRELGMLTRPL----------------------------GDVIAFLPPLASTAEELSEM 432 (448)
T ss_dssp BTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE----------------------------TTEEEECCCTTCCHHHHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHCCcEEecc----------------------------CCEEEEECCCCCCHHHHHHH
Confidence 311 0244555554445433221 2689997654 445566
Q ss_pred HHHHHHHHh
Q 009523 522 KADVLQALH 530 (532)
Q Consensus 522 i~dL~~AL~ 530 (532)
++.|+++++
T Consensus 433 l~~l~~~l~ 441 (448)
T 3dod_A 433 VAIMKQAIH 441 (448)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666664
No 205
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.83 E-value=3e-19 Score=190.73 Aligned_cols=291 Identities=14% Similarity=0.103 Sum_probs=185.7
Q ss_pred CCCCCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHh-------
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV------- 260 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~g---a~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~------- 260 (532)
+.+.++.++...+|+++|+++.+ .+++++++||++|+..+++.+.. .+++||+.++.|++........
T Consensus 96 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 175 (451)
T 3oks_A 96 TCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPY 175 (451)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred ccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCccc
Confidence 45567888999999999999986 25688999999999999987653 4589999999999854322111
Q ss_pred ---cccCCcEEEEeCCC------------------CHHHHHHhh----cCCCeeEEEEeCCCCCCCcccC----HHHHHH
Q 009523 261 ---LPKMGITATVIDPA------------------DMEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSD 311 (532)
Q Consensus 261 ---l~~~Gv~v~~vd~~------------------dle~Le~al----~~~~tklV~lesP~NptG~v~d----l~~I~~ 311 (532)
.......+..++.. +++.+++.+ .+.++++|++|..++..|.+.+ +++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~ 255 (451)
T 3oks_A 176 KDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLD 255 (451)
T ss_dssp TTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHH
Confidence 11111234444432 233333433 2335788888776666677776 999999
Q ss_pred HHHhCCCEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHH
Q 009523 312 LCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 385 (532)
Q Consensus 312 la~~~gi~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~ 385 (532)
+|++||+++|+||+|.... .........|++ |++|.+++ | ...|++++++++++.+...........++.
T Consensus 256 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G-~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 256 WCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-G-LPLSAVTGRAEIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTCSCTTSBCCSSSSCHH
T ss_pred HHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-C-cceEEEEECHHHHhhhcCCCcCCCCCCCHH
Confidence 9999999999999976321 122233346776 67899987 4 457888889888877654333333345777
Q ss_pred HHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----
Q 009523 386 AAYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---- 455 (532)
Q Consensus 386 ~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---- 455 (532)
.+++++..++.+.. .+++..++.+++.+.|+ ++|.+..+ ++.|.++++++..
T Consensus 332 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~G~~~~~~~~~~~~~ 393 (451)
T 3oks_A 332 ACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV------------------RGRGAMIAMELVKAGTT 393 (451)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEBSTTSC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------------------EEeeEEEEEEEecCccC
Confidence 77776666665432 23444455555555554 34443322 2357899999842
Q ss_pred --CHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHH
Q 009523 456 --DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQAL 529 (532)
Q Consensus 456 --~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL 529 (532)
.......+.+.+...++.+..++. ..+.+||++.+. +.++.++.|.++|
T Consensus 394 ~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 394 EPDADLTKALCAGAHAAGVIVLSCGT-------------------------YGNVVRFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp CBCHHHHHHHHHHHHHTTEECEEECT-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCcEEecCCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 234556677666555655443211 246899987754 3455556666665
Q ss_pred h
Q 009523 530 H 530 (532)
Q Consensus 530 ~ 530 (532)
+
T Consensus 449 ~ 449 (451)
T 3oks_A 449 R 449 (451)
T ss_dssp H
T ss_pred h
Confidence 4
No 206
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.83 E-value=3.9e-19 Score=192.43 Aligned_cols=218 Identities=13% Similarity=0.133 Sum_probs=154.2
Q ss_pred hhHHHH----HHHHHhhhCCC----cEEEeCCHHHHHHHHHHHhcc--------CC-----C-EEEEcCCCCcchHHHHH
Q 009523 201 PTTVVV----EEKMSALEGAE----STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCYRKTRIFIE 258 (532)
Q Consensus 201 p~~~~L----e~~lA~l~ga~----~~i~~sSG~~Ai~~al~all~--------~G-----d-~VIv~~~~y~~t~~~~~ 258 (532)
|....+ .+.+++++|.+ ..+++++|++|+..++.++.. +| + +|+++.+.|.+....+.
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~ 207 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGA 207 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHH
Confidence 554444 45668888865 477888899999999887742 57 6 79999999988665443
Q ss_pred HhcccCCc-EEEEeCCC-----CHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 259 TVLPKMGI-TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 259 ~~l~~~Gv-~v~~vd~~-----dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
. +. .|. +++.++.+ |+++|++++++. ++++|++++|+||+|.+.|+++|+++|+++|+++++|++|+
T Consensus 208 ~-~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~ 285 (504)
T 2okj_A 208 A-LG-FGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWG 285 (504)
T ss_dssp H-TT-SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred H-cC-CCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhh
Confidence 2 21 243 67777754 899999998652 48999999999999999999999999999999999999987
Q ss_pred CCCcc-----cccc--cCCcEEEECCccccCCCCCcEEEEEEeCh-HHHHHHHHH-hh-hcCC-----------------
Q 009523 328 TPLNQ-----KALS--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNL-HH-VLGG----------------- 380 (532)
Q Consensus 328 ~~~~~-----~~l~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~-~~-~~G~----------------- 380 (532)
.+... ..+. .++|+++.|+||+++++. ..|+++.++ ++++..... .. ..+.
T Consensus 286 ~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~--~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (504)
T 2okj_A 286 GGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 363 (504)
T ss_dssp GGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCS
T ss_pred hHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc--ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCC
Confidence 65432 1122 278999999999998654 257777665 455542211 11 1110
Q ss_pred --CccHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009523 381 --ALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVK 422 (532)
Q Consensus 381 --~~~~~~a~l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~ 422 (532)
.......|++++.+ +.+..++++..++++++.+.|++.|++.
T Consensus 364 ~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 409 (504)
T 2okj_A 364 GRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFE 409 (504)
T ss_dssp SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred CCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 11345555555444 3455667778888999999999887764
No 207
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.82 E-value=1e-18 Score=187.94 Aligned_cols=288 Identities=13% Similarity=0.133 Sum_probs=188.6
Q ss_pred CCCCCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHHh--
Q 009523 193 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 260 (532)
Q Consensus 193 ~~Y~R~~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all~--------~Gd~VIv~~~~y~~t~~~~~~~-- 260 (532)
+.+.++.++...+|+++|+++.+. +.+++++||++|+..+++.+.. ++++||+.++.|++........
T Consensus 91 ~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~ 170 (472)
T 3hmu_A 91 NTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGG 170 (472)
T ss_dssp CSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccC
Confidence 445677889999999999999864 5788899999999999998764 4689999999998843211111
Q ss_pred -------cccCCcEEEEeCCC---------C--------HHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHH
Q 009523 261 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 309 (532)
Q Consensus 261 -------l~~~Gv~v~~vd~~---------d--------le~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I 309 (532)
.. ....+..++.. | +++|++++++ .++++|++|+++|++|.+.+ +++|
T Consensus 171 ~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l 249 (472)
T 3hmu_A 171 MAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEI 249 (472)
T ss_dssp CHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHH
T ss_pred ChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHH
Confidence 11 11123333311 2 7888888861 26899999999999999887 9999
Q ss_pred HHHHHhCCCEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcC--CC
Q 009523 310 SDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GA 381 (532)
Q Consensus 310 ~~la~~~gi~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G--~~ 381 (532)
.++|++||++||+||++.... .........|+++ ++|.+++++ ...|++++++++++.+.......+ ..
T Consensus 250 ~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t--~sK~l~gg~-~plG~v~~~~~i~~~~~~~~~~~~~t~~ 326 (472)
T 3hmu_A 250 QRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT--IAKGLSSGY-APIGGSIVCDEVAHVIGKDEFNHGYTYS 326 (472)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTS-SCCEEEEEEHHHHHHHTTSCBCCCCTTT
T ss_pred HHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--echhhhcCC-cceEEEEECHHHHHhcccCCccccCCCC
Confidence 999999999999999976421 1222334567876 679998754 346788889999888732111122 23
Q ss_pred ccHHHHHHHHHhHHHHH--HHHHHHH-HHHHHHHHHHHhC---CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 382 LNPNAAYLIIRGMKTLH--LRVQQQN-STALRMAKILEAH---PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl~--~r~~~~~-~~a~~la~~L~~~---p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
.++..+..++..++.+. ..+++.. ++.+++.+.|++. |.+..+ ++.|.++.|++..
T Consensus 327 ~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v------------------r~~G~~~~i~~~~ 388 (472)
T 3hmu_A 327 GHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA------------------KIVGMMASIALTP 388 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE------------------EEETTEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EecCceEEEEEec
Confidence 46777777777776543 2344555 5666777777543 222221 3467899999864
Q ss_pred C-----------HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHH
Q 009523 456 D-----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFED 520 (532)
Q Consensus 456 ~-----------~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~d 520 (532)
+ ......+.+.|...++.+..+ | +.|||+..+ |+.++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------------------------g---~~iRi~p~~~~t~e~i~~ 440 (472)
T 3hmu_A 389 NKASRAKFASEPGTIGYICRERCFANNLIMRHV-------------------------G---DRMIISPPLVITPAEIDE 440 (472)
T ss_dssp CGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE-------------------------T---TEEEECCCTTCCHHHHHH
T ss_pred CccccccccchhHHHHHHHHHHHHHCCcEEEec-------------------------C---CEEEEECCCCCCHHHHHH
Confidence 3 122445555554334322211 1 689999554 44566
Q ss_pred HHHHHHHHHh
Q 009523 521 LKADVLQALH 530 (532)
Q Consensus 521 li~dL~~AL~ 530 (532)
+++.|+++|+
T Consensus 441 ~l~~l~~~l~ 450 (472)
T 3hmu_A 441 MFVRIRKSLD 450 (472)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666664
No 208
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.82 E-value=3.1e-19 Score=192.90 Aligned_cols=241 Identities=12% Similarity=0.148 Sum_probs=158.6
Q ss_pred CCCCCCCCchhHHHHH----HHHHhhhCC---CcEEEeCCHHHHHHHHHHHh----c---------cC------CC-EEE
Q 009523 192 SFEYGRYGNPTTVVVE----EKMSALEGA---ESTVIMASGMSASTVMLLAL----V---------PA------GG-HIV 244 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le----~~lA~l~ga---~~~i~~sSG~~Ai~~al~al----l---------~~------Gd-~VI 244 (532)
.+.|+. .|...++| ++|++++|. +..+++++|++|+..++.++ + ++ || +|+
T Consensus 129 ~~~~~~--~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~ 206 (497)
T 2qma_A 129 MDSWDQ--ASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIV 206 (497)
T ss_dssp TTCGGG--CHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEE
T ss_pred ccchhh--ChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEE
Confidence 344443 34555554 459999987 45788888999999888873 3 13 46 899
Q ss_pred EcCCCCcchHHHHHHhcccCCc-EEEEeCCC-----CHHHHHHhhcCC---C--eeEEEEeCCCCCCCcccCHHHHHHHH
Q 009523 245 TTTDCYRKTRIFIETVLPKMGI-TATVIDPA-----DMEGLEAALNNN---N--VSLFFTESPTNPFLRCVDVKLVSDLC 313 (532)
Q Consensus 245 v~~~~y~~t~~~~~~~l~~~Gv-~v~~vd~~-----dle~Le~al~~~---~--tklV~lesP~NptG~v~dl~~I~~la 313 (532)
++...|.+....+.. +. .|. +++.++.+ |+++|++++++. . +.+|+++.++|++|.+.|+++|+++|
T Consensus 207 ~s~~~h~s~~~~~~~-~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~ 284 (497)
T 2qma_A 207 CSKKSHFTVQKSASW-MG-LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMA 284 (497)
T ss_dssp EETTSCTHHHHHHHH-TT-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred ECCCchHHHHHHHHH-cC-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 999999886544322 21 143 67777654 899999998652 1 34888999999999999999999999
Q ss_pred HhCCCEEEEECCCCCCCccccc-----cc-CCcEEEECCccccCCCCCcEEEEEEeC-hHHHHHHHHHhhhc-CC-----
Q 009523 314 HKKGAIVCIDGTFATPLNQKAL-----SL-GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-GG----- 380 (532)
Q Consensus 314 ~~~gi~lIvDet~a~~~~~~~l-----~~-gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~-G~----- 380 (532)
+++|+++|+|++|+.+....+. .. ++|+++.|+||+++++.+ .|+++.+ +..++.+....... +.
T Consensus 285 ~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~--~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~ 362 (497)
T 2qma_A 285 VKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTIS--CGALLVNDKSNFKFLLHHADYLNREHDELP 362 (497)
T ss_dssp HHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS--CEEEEESCGGGGGGGCC-------------
T ss_pred HHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcc--eEEEEEeCHHHHHHhcCCchhcCCccccCC
Confidence 9999999999998765332111 12 679999999998887653 4655554 44333321100000 00
Q ss_pred -----------CccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCccc
Q 009523 381 -----------ALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGG 447 (532)
Q Consensus 381 -----------~~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~ 447 (532)
.......|.+++ +.+.+..++++..++++++.+.|++.+++..+..| .++
T Consensus 363 ~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~ 425 (497)
T 2qma_A 363 NLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEP-----------------SLS 425 (497)
T ss_dssp -------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCC-----------------SSS
T ss_pred CccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCC-----------------Cce
Confidence 011223344444 23445666777888999999999988776432222 245
Q ss_pred EEEEEEcC
Q 009523 448 VVSFEVDG 455 (532)
Q Consensus 448 ~vsf~l~g 455 (532)
+++|.+.+
T Consensus 426 ~v~f~~~~ 433 (497)
T 2qma_A 426 TVLFRATH 433 (497)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 89998864
No 209
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.82 E-value=8.7e-19 Score=186.17 Aligned_cols=279 Identities=15% Similarity=0.162 Sum_probs=177.5
Q ss_pred hhHHHHHHHHHhhhCCCcE--EEeCCHHHHHHHHHHH-hccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---
Q 009523 201 PTTVVVEEKMSALEGAEST--VIMASGMSASTVMLLA-LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 274 (532)
Q Consensus 201 p~~~~Le~~lA~l~ga~~~--i~~sSG~~Ai~~al~a-ll~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~--- 274 (532)
+...++++.+++++|.+.. +++++|+.++..++.+ .+++||+|+++.+.|+++...+...++..|++++.++..
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~ 187 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR 187 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCc
Confidence 4467899999999998643 5666666444444433 357999999999999988776665566789999988742
Q ss_pred -CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC-CCCCCcccccccCCcEEEECCcc----
Q 009523 275 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATK---- 348 (532)
Q Consensus 275 -dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet-~a~~~~~~~l~~gaDivv~S~sK---- 348 (532)
|+++ +++ +|++|++++| ||+|.+.|+++|+++|+++|+++|+|.. .+.+....+..+|+|+++.|.+|
T Consensus 188 ~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~ 261 (438)
T 1wyu_A 188 TPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLP 261 (438)
T ss_dssp CCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCC
T ss_pred cCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCC
Confidence 3333 665 6999999999 9999999999999999999999997743 22222223345789999999555
Q ss_pred -ccCCCCCcEEEEEEeChHHHHHHHHH-------------------------hhhcCC-Cc---cHHHH---HHHHHhH-
Q 009523 349 -FIGGHNDVLAGSISGSGKLVTQIRNL-------------------------HHVLGG-AL---NPNAA---YLIIRGM- 394 (532)
Q Consensus 349 -~lgg~gd~~gG~lv~~~~li~~l~~~-------------------------~~~~G~-~~---~~~~a---~l~l~~l- 394 (532)
+++|++ +|++++++++++.+... +...+. .. ....+ +..+..+
T Consensus 262 ~~~~Gp~---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~ 338 (438)
T 1wyu_A 262 MGFGGPH---FGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALG 338 (438)
T ss_dssp CGGGCSC---CEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---eeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhC
Confidence 344543 68999988776554210 111121 11 22222 1112212
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009523 395 -KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 473 (532)
Q Consensus 395 -~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~ 473 (532)
+.+....++..++++++.+.|++.+++. +..|. + +-.++.|.++.+ ...+.+.|...++.
T Consensus 339 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~----~-----------~~~~~~~~~~~~---~~~~~~~L~~~gi~ 399 (438)
T 1wyu_A 339 PEGLREVALKSVEMAHKLHALLLEVPGVR-PFTPK----P-----------FFNEFALALPKD---PEAVRRALAERGFH 399 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCE-ECSCS----S-----------BCSEEEEECSSC---HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeE-ECCCC----C-----------eEEEEEEeCCCC---HHHHHHHHHHCCce
Confidence 2244455666788888999998877764 32221 1 123455655322 33444454434554
Q ss_pred e--cCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 474 P--SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 474 v--s~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
+ ..|..+ .++.||||++..++++.++.+.++|++
T Consensus 400 v~~~~~~~~------------------------~~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 400 GATPVPREY------------------------GENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp CCEECCTTS------------------------CSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred ecccccccc------------------------CCCeEEEEecccCCHHHHHHHHHHHHH
Confidence 4 223210 157899999976666666666666653
No 210
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.82 E-value=1.6e-18 Score=185.36 Aligned_cols=292 Identities=12% Similarity=0.102 Sum_probs=184.8
Q ss_pred CCCCCCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhc-----
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL----- 261 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l----- 261 (532)
.|.+.++.++...+|+++|+++.+. +++++++||++|+..+++.+. ..+++||+.++.|++........-
T Consensus 98 ~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~ 177 (453)
T 4ffc_A 98 HTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMP 177 (453)
T ss_dssp CCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTT
T ss_pred ccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcc
Confidence 3555678889999999999999863 568899999999999997664 355899999999988543221110
Q ss_pred -----ccCCcEEEEeCCC----C-------------HHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHh
Q 009523 262 -----PKMGITATVIDPA----D-------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 315 (532)
Q Consensus 262 -----~~~Gv~v~~vd~~----d-------------le~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~ 315 (532)
......+..++.. | ++.|++++.+.++++|++|..++..|.+.+ +++|.++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~ 257 (453)
T 4ffc_A 178 YKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASE 257 (453)
T ss_dssp TTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred cccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 1111133444332 2 366777775535677777655555566666 9999999999
Q ss_pred CCCEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHH
Q 009523 316 KGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 389 (532)
Q Consensus 316 ~gi~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l 389 (532)
||+++|+||+|.... .........|++ +++|.+++ | ...|++++++++++.+...........++..+..
T Consensus 258 ~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aa 333 (453)
T 4ffc_A 258 NGVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIAG-G-MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAA 333 (453)
T ss_dssp HTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHH
T ss_pred cCCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhcC-C-cCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHH
Confidence 999999999976321 112223345665 47899987 4 4578888998888776543332233456777766
Q ss_pred HHHhHHHHH--HHHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC------CH
Q 009523 390 IIRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DL 457 (532)
Q Consensus 390 ~l~~l~tl~--~r~~~~~~~a~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g------~~ 457 (532)
++..++.+. ..+++..++.+++.+.|+ ++|.+..+ ++.|.++++++.. ..
T Consensus 334 a~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~ 395 (453)
T 4ffc_A 334 AVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV------------------RGRGAMLAIEIVKPGTLEPDA 395 (453)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE------------------EEETTEEEEEEBCTTSCCBCH
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------------------EeeceEEEEEEecCcccCCCH
Confidence 666666432 223344444555555444 44443322 2357899999842 23
Q ss_pred HHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009523 458 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 530 (532)
Q Consensus 458 ~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL~~AL~ 530 (532)
.....+.+.+...++.+..++. .++.+||++.+. +.++.++.|.++++
T Consensus 396 ~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 447 (453)
T 4ffc_A 396 ALTKSIAAEALSQGVLILTCGT-------------------------FGNVIRLLPPLVIGDDLLDEGITALSDIIR 447 (453)
T ss_dssp HHHHHHHHHHHHTTEECCEECT-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEecCCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4556676666555655543311 246899987754 44555666666654
No 211
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.82 E-value=2.9e-19 Score=189.07 Aligned_cols=286 Identities=14% Similarity=0.116 Sum_probs=187.8
Q ss_pred CCCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHHh---------cc-c
Q 009523 197 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV---------LP-K 263 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~-ga~~~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~~---------l~-~ 263 (532)
.++++...+|+++|++++ +.+++++++||++|+..+++.+.. ++++||+.++.|++........ .. .
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 168 (429)
T 3k28_A 89 GAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDS 168 (429)
T ss_dssp SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCC
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCc
Confidence 367889999999999998 457788899999999999987654 6789999999998632110000 00 0
Q ss_pred CCc------EEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCC-
Q 009523 264 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL- 330 (532)
Q Consensus 264 ~Gv------~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~- 330 (532)
.++ .+..++.+|+++|++++++ .++++|++|.++|++|.+.+ +++|.++|++||+++|+||++....
T Consensus 169 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~ 248 (429)
T 3k28_A 169 PGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRV 248 (429)
T ss_dssp TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred CCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 011 3445566689999998862 25889999888888899988 9999999999999999999986431
Q ss_pred ----cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcC--CCccHHHHHHHHHhHHHH-HHHHH
Q 009523 331 ----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTL-HLRVQ 402 (532)
Q Consensus 331 ----~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G--~~~~~~~a~l~l~~l~tl-~~r~~ 402 (532)
.........|++ +++|.+++ | ...|++++++++++.+..... ..+ ...++..+..++..++.+ ....+
T Consensus 249 g~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~ 324 (429)
T 3k28_A 249 AYNCGQGYYGVTPDLT--CLGKVIGG-G-LPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYV 324 (429)
T ss_dssp STTHHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHH
T ss_pred CcchHHHHhCCCCcee--hhhhhhcC-C-CCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 111223345665 47899986 3 467899999988877654221 122 235677766666666532 33445
Q ss_pred HHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC------------CHHHHHHHHHH
Q 009523 403 QQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------------DLTATIKFIDA 466 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g------------~~~~~~~~l~~ 466 (532)
+..++.+++.+.|++. +.+..+ ++.|.++++++.. +......+.+.
T Consensus 325 ~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (429)
T 3k28_A 325 EFERKAEMLEAGLRKAAEKHGIPHHI------------------NRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYRE 386 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEE------------------EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEEE------------------EeeccEEEEEEecCCcccccccccccHHHHHHHHHH
Confidence 5556666666666542 322211 2357788888742 12234556666
Q ss_pred cCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhh
Q 009523 467 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHA 531 (532)
Q Consensus 467 L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~--ed~~dli~dL~~AL~~ 531 (532)
+...++.+..|+ .+.+|+++.. ++.+++++.|++++++
T Consensus 387 l~~~Gv~v~~~~---------------------------~~~~r~~~~~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 387 MVEQGVFLPPSQ---------------------------FEGLFLSTVHSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp HHHTTEECCSST---------------------------TSCBCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHCCeEEecCC---------------------------CCCEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 655565554432 2345665543 4566677777777764
No 212
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.82 E-value=6.7e-19 Score=187.61 Aligned_cols=235 Identities=17% Similarity=0.159 Sum_probs=152.5
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH---hccCCCEEEEcCCCCcchHHHHHHhc------c-cCCc
Q 009523 198 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVL------P-KMGI 266 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~-ga~~~i~~sSG~~Ai~~al~a---ll~~Gd~VIv~~~~y~~t~~~~~~~l------~-~~Gv 266 (532)
+.++..+++.+.++++. +.+++++++||++|+..+++. +.+ +++||+.++.|++......... . ..|+
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~ 172 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGV 172 (453)
T ss_dssp SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHC-CCEEEEECC-------------------------
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCC
Confidence 56778888888888887 456788999999999999987 544 5788888899987432211100 0 1233
Q ss_pred ------EEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc---
Q 009523 267 ------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN--- 331 (532)
Q Consensus 267 ------~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~--- 331 (532)
.+..++..|+++|++++++ .++++|+++.++|++|.+.+ +++|.++|++||+++|+||++.....
T Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~ 252 (453)
T 2cy8_A 173 LPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNH 252 (453)
T ss_dssp ---CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTT
T ss_pred CccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCch
Confidence 2445666799999999873 25889988777788999888 99999999999999999999873311
Q ss_pred --ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH---Hhhhc--CCCccHHHHHHHHHhHHH-H-HHHHH
Q 009523 332 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHHVL--GGALNPNAAYLIIRGMKT-L-HLRVQ 402 (532)
Q Consensus 332 --~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~---~~~~~--G~~~~~~~a~l~l~~l~t-l-~~r~~ 402 (532)
........|++ |++|.+++ | ..+|++++++++++.+.. ..... ....++..++++...++. + ....+
T Consensus 253 ~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~ 328 (453)
T 2cy8_A 253 GMQALLDVQPDLT--CLAKASAG-G-LPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCA 328 (453)
T ss_dssp HHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhHHhCCCCcEE--EEChhhhC-C-cceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHH
Confidence 11123346765 68899996 3 458999999988876644 11111 123567777766666665 3 33345
Q ss_pred HHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 403 QQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
+..++.+++.+.|++. +.+..+ ++.|.+++++++.
T Consensus 329 ~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~i~~~~ 367 (453)
T 2cy8_A 329 KINDLGQFAREAMNHLFARKGLNWLA------------------YGRFSGFHLMPGL 367 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE------------------ECCTTEEEEEETS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEE------------------EEeeeEEEEEEec
Confidence 5556666776666542 221111 2357799999974
No 213
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.82 E-value=6.8e-19 Score=185.82 Aligned_cols=257 Identities=17% Similarity=0.135 Sum_probs=171.3
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH--hccCCCEEEEcCCCCcchHHHHHHhc----------ccC
Q 009523 198 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA--LVPAGGHIVTTTDCYRKTRIFIETVL----------PKM 264 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~-ga~~~i~~sSG~~Ai~~al~a--ll~~Gd~VIv~~~~y~~t~~~~~~~l----------~~~ 264 (532)
+.++...+|+++|+++. +.+++++++||++|+..+++. .+.++|.||+.++.|++......... ...
T Consensus 89 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 168 (424)
T 2e7u_A 89 APSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSA 168 (424)
T ss_dssp SCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCC
Confidence 57788999999999998 567788999999999999885 23456889999999987432110000 012
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc-
Q 009523 265 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 331 (532)
Q Consensus 265 Gv------~v~~vd~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~- 331 (532)
|+ .+..++..|+++|++++++ .++++|+++..++++|.+.+ +++|.++ ++||+++|+||++.....
T Consensus 169 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g 247 (424)
T 2e7u_A 169 GVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLA 247 (424)
T ss_dssp TCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSS
T ss_pred CCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccc
Confidence 32 3555666799999999862 25788887554455899888 9999999 999999999999874311
Q ss_pred ----ccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcC--CCccHHHHHHHHHhHHHHHH---HH
Q 009523 332 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLHL---RV 401 (532)
Q Consensus 332 ----~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G--~~~~~~~a~l~l~~l~tl~~---r~ 401 (532)
........|++ |++|.+++ | ..+|++++++++++.+..... ..+ ...++..+..+...++.+.. ..
T Consensus 248 ~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 323 (424)
T 2e7u_A 248 FGGATELLGLKPDLV--TLGKILGG-G-LPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYY 323 (424)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHH
T ss_pred hhHHHHHhCCCcchh--hhhhhhhC-C-cceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 11122346765 78999996 3 458899999988877654211 122 13567766666666665432 44
Q ss_pred HHHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------------HHHHHHHHH
Q 009523 402 QQQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFID 465 (532)
Q Consensus 402 ~~~~~~a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------------~~~~~~~l~ 465 (532)
++..++.+++.+.|++. +.+..+ ++.|.+++++++.. ......+.+
T Consensus 324 ~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (424)
T 2e7u_A 324 AYLEDLGARLEAGLKEVLKEKGLPHTV------------------NRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFH 385 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEE------------------EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEE------------------EeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHH
Confidence 55566677777777653 221111 23577999998641 234556777
Q ss_pred HcCCCceeecCC
Q 009523 466 ALKIPYIAPSFG 477 (532)
Q Consensus 466 ~L~~~~i~vs~G 477 (532)
.|...++.+..|
T Consensus 386 ~l~~~Gv~v~~~ 397 (424)
T 2e7u_A 386 GLLDRGIYWPPS 397 (424)
T ss_dssp HHHTTTEECCSS
T ss_pred HHHHCCeEEecc
Confidence 766567666554
No 214
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.82 E-value=2.6e-19 Score=191.02 Aligned_cols=295 Identities=17% Similarity=0.116 Sum_probs=175.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccC-----C----CEEEEcCCCCcchHHHHHHhcccCCcEEEE
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----G----GHIVTTTDCYRKTRIFIETVLPKMGITATV 270 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~-----G----d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~ 270 (532)
.+...+|+++|++++|.+++++++||++|+.+++.+++++ | |+|++. ..|+.+...... ..|..+..
T Consensus 73 ~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~---~~~~~~~~ 148 (467)
T 2oqx_A 73 SRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQ---INGCTVRN 148 (467)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHH---HTTCEEEE
T ss_pred CchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchhhhh---ccCcceee
Confidence 5678899999999999999999999999999999998888 9 998877 445443221111 11222211
Q ss_pred ------eC------C---CCHHHHHHhhcC---CCeeEEEEeCCCCCC-CcccC---HHHHHHHHHhCCCEEEEECCCCC
Q 009523 271 ------ID------P---ADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT 328 (532)
Q Consensus 271 ------vd------~---~dle~Le~al~~---~~tklV~lesP~Npt-G~v~d---l~~I~~la~~~gi~lIvDet~a~ 328 (532)
++ . .|+++|++++++ .++++|++++|+||+ |.+.+ +++|+++|++||+++|+|++++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~ 228 (467)
T 2oqx_A 149 VYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFA 228 (467)
T ss_dssp CBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHH
T ss_pred ccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhh
Confidence 11 1 279999999973 269999999999998 88765 67999999999999999966432
Q ss_pred --------------CCcccccc----cCCcEEEECCccccCCCCCcEEEEEEeChH-HHHH---HHHHhhhcC-----CC
Q 009523 329 --------------PLNQKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQ---IRNLHHVLG-----GA 381 (532)
Q Consensus 329 --------------~~~~~~l~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~-li~~---l~~~~~~~G-----~~ 381 (532)
+.....+. ..+|+++.|+||+++.+ +||+++++++ +++. ++......+ +.
T Consensus 229 e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (467)
T 2oqx_A 229 ENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGG 305 (467)
T ss_dssp HHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCC
T ss_pred hhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHHHHHHhhhccCCcccccc
Confidence 11111111 34788899999999865 3688888766 4444 333221111 11
Q ss_pred ccHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc----C
Q 009523 382 LNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD----G 455 (532)
Q Consensus 382 ~~~~~a~l~l~~l~tl--~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~----g 455 (532)
........+..+++.. ..++++..++++++.+.|++. ++..+ |. .|.++++.++ +
T Consensus 306 ~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~----------------~~~~~~~~~~~~~~~ 366 (467)
T 2oqx_A 306 LEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ--QA----------------GGHAAFVDAGKLLPH 366 (467)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE--EE----------------CSSCEEEEHHHHSTT
T ss_pred hhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee--cC----------------CceEEEEechhhccc
Confidence 2222222222232322 234555667788889999876 44322 31 2456777763 1
Q ss_pred -CHHH--HHHHHHHc-CCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-C----HHHHHHHHH
Q 009523 456 -DLTA--TIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-D----FEDLKADVL 526 (532)
Q Consensus 456 -~~~~--~~~~l~~L-~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e-d----~~dli~dL~ 526 (532)
+... ...+.+.| ...++.++.|+.+.....|. +. .......+.|||+++.. . .+++++.|.
T Consensus 367 ~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~---~g-------~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~ 436 (467)
T 2oqx_A 367 IPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPK---TG-------KQLPCPAELLRLTIPRATYTQTHMDFIIEAFK 436 (467)
T ss_dssp SCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTT---TC-------SBCCCSCCEEEECCCTTTSCHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHhcCceeccccccccccccc---cc-------ccccCccCeEEEEecCCCCCHHHHHHHHHHHH
Confidence 1111 34455555 55577776644321100010 00 00001247999999975 3 444455555
Q ss_pred HHHh
Q 009523 527 QALH 530 (532)
Q Consensus 527 ~AL~ 530 (532)
++++
T Consensus 437 ~~l~ 440 (467)
T 2oqx_A 437 HVKE 440 (467)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 215
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.82 E-value=1.2e-18 Score=187.83 Aligned_cols=253 Identities=16% Similarity=0.194 Sum_probs=174.5
Q ss_pred CCCCCCCCchhHHHHHHHH----HhhhCCC------------cEEEeCCHHHHHHHHHHHhcc-----------------
Q 009523 192 SFEYGRYGNPTTVVVEEKM----SALEGAE------------STVIMASGMSASTVMLLALVP----------------- 238 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~l----A~l~ga~------------~~i~~sSG~~Ai~~al~all~----------------- 238 (532)
.+.|. ..|...++|+.+ ++++|.+ ..+++++|++|+..++.+...
T Consensus 107 ~~~~~--~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~ 184 (481)
T 4e1o_A 107 GFTWA--SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESS 184 (481)
T ss_dssp CSSTT--TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred cCCcC--CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCccccccc
Confidence 44454 467777777655 5566754 458889999999888876532
Q ss_pred --CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-----CHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCH
Q 009523 239 --AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDV 306 (532)
Q Consensus 239 --~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-----dle~Le~al~~~-----~tklV~lesP~NptG~v~dl 306 (532)
+++.|+++...|.+..... ...|++++.++.+ |+++|+++|++. .+.+|+++.++|++|.+.|+
T Consensus 185 ~~~~~~v~~s~~~H~s~~~~~----~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l 260 (481)
T 4e1o_A 185 LNARLVAYASDQAHSSVEKAG----LISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCL 260 (481)
T ss_dssp HHTTEEEEEETTSCHHHHHHH----HHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred ccCCeEEEEcCcchHHHHHHH----HhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCH
Confidence 5789999999998865443 3357888888754 899999999752 17788999999999999999
Q ss_pred HHHHHHHHhCCCEEEEECCCCCCCcc----cccccC---CcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH----Hh
Q 009523 307 KLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LH 375 (532)
Q Consensus 307 ~~I~~la~~~gi~lIvDet~a~~~~~----~~l~~g---aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~----~~ 375 (532)
++|+++|++||+++++|++++..... .....| +|.++.++||+++.+.+. +++++.+++++..... +.
T Consensus 261 ~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~-g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 261 SELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC-TGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC-EEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce-EEEEEeCHHHHHHHhcCCchhc
Confidence 99999999999999999998764321 222224 599999999999977542 4455555544332110 00
Q ss_pred h---------------hcCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhH
Q 009523 376 H---------------VLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIA 438 (532)
Q Consensus 376 ~---------------~~G~~~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~ 438 (532)
. ..+........|.+++ +.+.+..++++..++++++.+.|++.|++.-+..|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~----------- 408 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKR----------- 408 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCC-----------
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------
Confidence 0 0111123444555444 44567778888889999999999998876432211
Q ss_pred hhhcCCcccEEEEEEcCCHHHHHHHHHHcC
Q 009523 439 TQQMTGFGGVVSFEVDGDLTATIKFIDALK 468 (532)
Q Consensus 439 ~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~ 468 (532)
..++++|.+++.......+.+.|.
T Consensus 409 ------~~~~v~f~~~~~~~~~~~l~~~L~ 432 (481)
T 4e1o_A 409 ------HLGLVVFRLKGPNSLTENVLKEIA 432 (481)
T ss_dssp ------CSSEEEEEESSCHHHHHHHHHHHH
T ss_pred ------ceeEEEEEeCCchHHHHHHHHHHH
Confidence 246899999765444566666664
No 216
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.82 E-value=5.9e-19 Score=199.93 Aligned_cols=218 Identities=13% Similarity=0.057 Sum_probs=157.4
Q ss_pred CCCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 195 YGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 195 Y~R~~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
+-.........+++.+++++|.++.+++++|+ +|+.+++.+++++||+|++++++|.+....+ ...|+++++++.
T Consensus 199 ~L~~~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~----~~~G~~~v~v~~ 274 (755)
T 2vyc_A 199 SLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----MLTGAKPVYMVP 274 (755)
T ss_dssp CTTTTCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHHCCEEEEECC
T ss_pred ccccCccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeC
Confidence 33345567888999999999998888888886 8899999999999999999999999876543 345888887753
Q ss_pred C---------------CHHHHHHhhcCC-Cee--------EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC
Q 009523 274 A---------------DMEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 329 (532)
Q Consensus 274 ~---------------dle~Le~al~~~-~tk--------lV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~ 329 (532)
. |+++|+++++++ +++ ++++++| ||+|.+.|+++|+++|+++|+++++|++++..
T Consensus 275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchh
Confidence 2 799999998642 344 8999998 69999999999999999999999999998754
Q ss_pred Ccc-------cccccC--CcE------EEECCccccCCCCCcEEEEEEeChH--H--HHHHHHHhhhc-CCCccHHHHHH
Q 009523 330 LNQ-------KALSLG--ADL------VLHSATKFIGGHNDVLAGSISGSGK--L--VTQIRNLHHVL-GGALNPNAAYL 389 (532)
Q Consensus 330 ~~~-------~~l~~g--aDi------vv~S~sK~lgg~gd~~gG~lv~~~~--l--i~~l~~~~~~~-G~~~~~~~a~l 389 (532)
... .++ .| +|+ ++.|+||+++|+. .+|+++.+++ . ...+......+ .++++......
T Consensus 354 ~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~--~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaa 430 (755)
T 2vyc_A 354 ARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICAS 430 (755)
T ss_dssp GGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCT--TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHH
T ss_pred cccCcccCCcchh-cCCcCCccCCCeEEEECccccccCcC--CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHH
Confidence 322 222 56 776 9999999999875 3677766443 1 23333322222 23334332222
Q ss_pred HHHhHHH-----HHHHHHHHHHHHHHHHHHHHhCCC
Q 009523 390 IIRGMKT-----LHLRVQQQNSTALRMAKILEAHPK 420 (532)
Q Consensus 390 ~l~~l~t-----l~~r~~~~~~~a~~la~~L~~~p~ 420 (532)
+..+++. ...++++..++++++.+.|++.++
T Consensus 431 l~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 431 NDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2222321 345667777888888888876544
No 217
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.82 E-value=9.1e-19 Score=186.89 Aligned_cols=281 Identities=14% Similarity=0.095 Sum_probs=180.0
Q ss_pred CCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc---c-----------CCCEEEEcCCCCcchHHHH-
Q 009523 196 GRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV---P-----------AGGHIVTTTDCYRKTRIFI- 257 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~g---a~~~i~~sSG~~Ai~~al~all---~-----------~Gd~VIv~~~~y~~t~~~~- 257 (532)
.+|.++...+++++|+++++ .+++++++||++|+..+++.+. + +||+||+.++.|++.....
T Consensus 96 ~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~ 175 (449)
T 2cjg_A 96 SDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTL 175 (449)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGG
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchh
Confidence 46788889999999999985 3578888999999999987542 2 2899999999998743211
Q ss_pred ---------HHhcccCCcEEEEeCCCC--H-------------HHHHHhhc--CCCeeEEEEeCCCCCCCcccC----HH
Q 009523 258 ---------ETVLPKMGITATVIDPAD--M-------------EGLEAALN--NNNVSLFFTESPTNPFLRCVD----VK 307 (532)
Q Consensus 258 ---------~~~l~~~Gv~v~~vd~~d--l-------------e~Le~al~--~~~tklV~lesP~NptG~v~d----l~ 307 (532)
+.........+.+++..| . ++|+++++ ..++++|++|+++||+|.+.+ ++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 255 (449)
T 2cjg_A 176 SLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFA 255 (449)
T ss_dssp GTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHH
T ss_pred hhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHH
Confidence 011111122455566555 3 33888885 136999999887899998777 99
Q ss_pred HHHHHHHhCCCEEEEECCCCCCC------cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHH-----Hhh
Q 009523 308 LVSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-----LHH 376 (532)
Q Consensus 308 ~I~~la~~~gi~lIvDet~a~~~------~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-----~~~ 376 (532)
+|.++|++||+++|+||+|.... .........|++ |++|.+ + .|++++++++++.+.. ...
T Consensus 256 ~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~----iG~~~~~~~~~~~l~~~~~~~~~~ 327 (449)
T 2cjg_A 256 AMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q----VCGVMAGRRVDEVADNVFAVPSRL 327 (449)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S----SEEEEECGGGGGSTTCTTTSTTSS
T ss_pred HHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c----EEEEEECHHHhhhhhhcccCCccc
Confidence 99999999999999999987421 112233456776 578998 2 4677788887765321 111
Q ss_pred hcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh----CCC-ceEEeCCCCCCCchhhhHhhhcCCcccEE
Q 009523 377 VLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA----HPK-VKRVHYPGLKSHPEHHIATQQMTGFGGVV 449 (532)
Q Consensus 377 ~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~----~p~-v~~V~~Pgl~s~p~~~l~~~~~~g~G~~v 449 (532)
......++..+..+...++.+. ...++..++.+++.+.|++ +|. +..+ ++.|.++
T Consensus 328 ~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~------------------~~~g~~~ 389 (449)
T 2cjg_A 328 NSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP------------------RGRGLMC 389 (449)
T ss_dssp CCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE------------------EEETTEE
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------eeccEEE
Confidence 1112345666666666665432 2334555666777777764 233 3222 2357799
Q ss_pred EEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHH
Q 009523 450 SFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADV 525 (532)
Q Consensus 450 sf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~e----d~~dli~dL 525 (532)
+|++++ ......+.+.|...++.+..+ .++.|||++++. +.+++++.|
T Consensus 390 ~~~~~~-~~~~~~~~~~l~~~Gv~v~~~---------------------------g~~~iRi~~~~~~t~e~i~~~l~~l 441 (449)
T 2cjg_A 390 AFSLPT-TADRDELIRQLWQRAVIVLPA---------------------------GADTVRFRPPLTVSTAEIDAAIAAV 441 (449)
T ss_dssp EEECSS-HHHHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHHHHHHH
T ss_pred EEEECC-hHHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 998864 233455666664445544332 147899987654 344555555
Q ss_pred HHHHh
Q 009523 526 LQALH 530 (532)
Q Consensus 526 ~~AL~ 530 (532)
.++++
T Consensus 442 ~~~l~ 446 (449)
T 2cjg_A 442 RSALP 446 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 218
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.82 E-value=2.8e-18 Score=186.39 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=152.9
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHhc-------c-CCC------EEEEcCCCCcchHHHHHHhcccCCc
Q 009523 203 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-------P-AGG------HIVTTTDCYRKTRIFIETVLPKMGI 266 (532)
Q Consensus 203 ~~~Le~~lA~l~ga~--~~i~~sSG~~Ai~~al~all-------~-~Gd------~VIv~~~~y~~t~~~~~~~l~~~Gv 266 (532)
..++++.+++++|.+ .++++++|++|+..++.++. + +|| +|+++...|++....+. ..|+
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~----~~g~ 225 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAA----FLGL 225 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH----HTTS
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHH----HcCC
Confidence 345667799999974 57888899999988887763 2 576 89999999988665442 2344
Q ss_pred ---EEEEeCCC-----CHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCccc
Q 009523 267 ---TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK 333 (532)
Q Consensus 267 ---~v~~vd~~-----dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~~ 333 (532)
+++.++.+ |+++|++++++. ++++|++++|+|++|.+.|+++|+++|+++|+++|+|++++.+....
T Consensus 226 g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~ 305 (515)
T 2jis_A 226 GTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLS 305 (515)
T ss_dssp CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGC
T ss_pred CCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhC
Confidence 77777653 799999998641 48999999999999999999999999999999999999987654321
Q ss_pred c-----c-cc-CCcEEEECCccccCCCCCcEEEEEEeChH--HHHHHH----HHhh-----------------hcCCCcc
Q 009523 334 A-----L-SL-GADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIR----NLHH-----------------VLGGALN 383 (532)
Q Consensus 334 ~-----l-~~-gaDivv~S~sK~lgg~gd~~gG~lv~~~~--li~~l~----~~~~-----------------~~G~~~~ 383 (532)
+ + .. ++|+++.|+||+++++.+ .|+++.+++ +++... .+.. ..+....
T Consensus 306 ~~~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~ 383 (515)
T 2jis_A 306 QTHRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVD 383 (515)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCC
T ss_pred hhhHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCccc
Confidence 1 2 22 789999999999986542 577776654 655421 1110 0011122
Q ss_pred HHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCceE
Q 009523 384 PNAAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVKR 423 (532)
Q Consensus 384 ~~~a~l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 423 (532)
....|.+++.+ +.+...+++..++++++.+.|++.|++..
T Consensus 384 al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 425 (515)
T 2jis_A 384 CLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFEL 425 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 44455444433 34556667778889999999998877643
No 219
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.82 E-value=4.8e-18 Score=182.89 Aligned_cols=292 Identities=14% Similarity=0.118 Sum_probs=189.4
Q ss_pred CCCC-CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHHh-
Q 009523 193 FEYG-RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV- 260 (532)
Q Consensus 193 ~~Y~-R~~~p~~~~Le~~lA~l~g--a~~~i~~sSG~~Ai~~al~all~--------~Gd~VIv~~~~y~~t~~~~~~~- 260 (532)
|.++ .+.++...+|+++|+++.+ .+.+++++||++|+..+++.+.+ .++.||+.++.|++........
T Consensus 88 ~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~ 167 (476)
T 3i5t_A 88 YASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACT 167 (476)
T ss_dssp CCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTC
T ss_pred CcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhcccc
Confidence 4344 6788999999999999985 46788999999999999988753 3579999999998854222111
Q ss_pred --------cccCCcEEEEeCC-------C-C--------HHHHHHhhcC---CCeeEEEEeCCCCCCCcccC----HHHH
Q 009523 261 --------LPKMGITATVIDP-------A-D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 309 (532)
Q Consensus 261 --------l~~~Gv~v~~vd~-------~-d--------le~Le~al~~---~~tklV~lesP~NptG~v~d----l~~I 309 (532)
.......+.+++. + | +++|+++++. .++++|++|+++|++|.+.+ +++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l 247 (476)
T 3i5t_A 168 GRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARF 247 (476)
T ss_dssp CCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHH
T ss_pred CChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 0111112333331 1 2 7889888862 36899999999999998666 9999
Q ss_pred HHHHHhCCCEEEEECCCCCCC------ccc-ccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHH-------h
Q 009523 310 SDLCHKKGAIVCIDGTFATPL------NQK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H 375 (532)
Q Consensus 310 ~~la~~~gi~lIvDet~a~~~------~~~-~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~ 375 (532)
.++|++||++||+||++.... ... ......|+++ ++|.++++ -...|++++++++++.+... .
T Consensus 248 ~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t--~sK~l~~G-~~plg~v~~~~~i~~~~~~~~~~~~~~~ 324 (476)
T 3i5t_A 248 KAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT--FAKGVTSG-YVPLGGLAISEAVLARISGENAKGSWFT 324 (476)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE--ECGGGGTT-SSCCEEEEECHHHHHTTSGGGCTTCEEC
T ss_pred HHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhh--hhhhhcCC-CcCeEEEEECHHHHHHHhcCCccccccc
Confidence 999999999999999976421 112 2333467775 67999863 13568888999988877643 1
Q ss_pred hhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEE
Q 009523 376 HVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 453 (532)
Q Consensus 376 ~~~G~~~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l 453 (532)
.......+|..+..++..++.+. ..+++..++.+++.+.|++... +|.+ ...++.|.++++++
T Consensus 325 ~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~v----------~~v~~~G~~~~i~~ 389 (476)
T 3i5t_A 325 NGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRD-----LPGV----------AETRSVGLVGCVQC 389 (476)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTT-----STTE----------EEEEEETTEEEEEE
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc-----CCCe----------EEEEecCceeEEEE
Confidence 11223356777777777776543 2345555667777777765321 1111 11234688999998
Q ss_pred cCCHH----------HHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHH
Q 009523 454 DGDLT----------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFE 519 (532)
Q Consensus 454 ~g~~~----------~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~ 519 (532)
..+.. ....+.+.+...|+.+.. . .+.|||+..+ ++.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~-------------------------~---g~~iRi~p~l~~t~e~i~ 441 (476)
T 3i5t_A 390 LLDPTRADGTAEDKAFTLKIDERCFELGLIVRP-------------------------L---GDLCVISPPLIISRAQID 441 (476)
T ss_dssp CCC-----CCHHHHHHHHHHHHHHHHTTEECEE-------------------------E---TTEEEECCCTTCCHHHHH
T ss_pred ecCccccccccchhHHHHHHHHHHHHCCCEEEe-------------------------c---CCEEEEECCCCCCHHHHH
Confidence 75311 244555555433433221 1 2689999554 4556
Q ss_pred HHHHHHHHHHh
Q 009523 520 DLKADVLQALH 530 (532)
Q Consensus 520 dli~dL~~AL~ 530 (532)
++++.|+++|+
T Consensus 442 ~~l~~l~~~l~ 452 (476)
T 3i5t_A 442 EMVAIMRQAIT 452 (476)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666664
No 220
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.81 E-value=1.9e-18 Score=186.05 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=170.2
Q ss_pred CchhHHHHHHHH----HhhhCCC-----------cEEEeCCHHHHHHHHHHHhc-------------------cCCCEEE
Q 009523 199 GNPTTVVVEEKM----SALEGAE-----------STVIMASGMSASTVMLLALV-------------------PAGGHIV 244 (532)
Q Consensus 199 ~~p~~~~Le~~l----A~l~ga~-----------~~i~~sSG~~Ai~~al~all-------------------~~Gd~VI 244 (532)
..|...++|+.+ ++++|.+ ..+++++|++|+..++.+.. .+++.|+
T Consensus 107 ~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi 186 (475)
T 3k40_A 107 ASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGY 186 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEE
Confidence 467777777655 6677765 47889999999888877652 1356899
Q ss_pred EcCCCCcchHHHHHHhcccCCcEEEEeCC----CCHHHHHHhhcCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHh
Q 009523 245 TTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHK 315 (532)
Q Consensus 245 v~~~~y~~t~~~~~~~l~~~Gv~v~~vd~----~dle~Le~al~~~-----~tklV~lesP~NptG~v~dl~~I~~la~~ 315 (532)
++...|.+..... ...|++++.++. .|+++|+++|++. .+.+|++..++|++|.+.|+++|+++|++
T Consensus 187 ~s~~~H~s~~~~~----~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~ 262 (475)
T 3k40_A 187 CSDQAHSSVERAG----LLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNK 262 (475)
T ss_dssp EETTSCHHHHHHH----HHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred ECCCchHHHHHHH----HHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHH
Confidence 9999998865443 345888888886 3899999999752 16788889999999999999999999999
Q ss_pred CCCEEEEECCCCCCCcc----ccccc---CCcEEEECCccccCCCCCcEEEEEEeChHHH-HHHHH---Hh-hh------
Q 009523 316 KGAIVCIDGTFATPLNQ----KALSL---GADLVLHSATKFIGGHNDVLAGSISGSGKLV-TQIRN---LH-HV------ 377 (532)
Q Consensus 316 ~gi~lIvDet~a~~~~~----~~l~~---gaDivv~S~sK~lgg~gd~~gG~lv~~~~li-~~l~~---~~-~~------ 377 (532)
||+++++|++++.+... ..... .+|.++.++||+++++.+ .+++++.+++++ +.+.. +. ..
T Consensus 263 ~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g-~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~ 341 (475)
T 3k40_A 263 HNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD-CSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAP 341 (475)
T ss_dssp TTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS-CEEEEESSGGGC--------------------
T ss_pred hCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc-eEEEEEeCHHHHHHHhcCCccccCCCcCCCCC
Confidence 99999999998764321 11112 369999999999887653 244444444442 22111 00 00
Q ss_pred --------cCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCccc
Q 009523 378 --------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGG 447 (532)
Q Consensus 378 --------~G~~~~~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~ 447 (532)
.+........|.+++ +.+.+..++++..++++++.+.|++.|++..+..| ..+
T Consensus 342 ~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~-----------------~~~ 404 (475)
T 3k40_A 342 DYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEI-----------------NMG 404 (475)
T ss_dssp -------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCC-----------------BTT
T ss_pred CcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-----------------ceE
Confidence 000112334444443 34556777788889999999999998887533212 246
Q ss_pred EEEEEEcCCHHHHHHHHHHcCC
Q 009523 448 VVSFEVDGDLTATIKFIDALKI 469 (532)
Q Consensus 448 ~vsf~l~g~~~~~~~~l~~L~~ 469 (532)
+++|.+++.......+.+.|..
T Consensus 405 iv~f~~~~~~~~~~~l~~~L~~ 426 (475)
T 3k40_A 405 LVCFRLKGSNERNEALLKRING 426 (475)
T ss_dssp EEEEEESSCHHHHHHHHHHHHH
T ss_pred EEEEEeCCchHHHHHHHHHHHh
Confidence 8999997654455666666653
No 221
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.80 E-value=1.4e-18 Score=183.48 Aligned_cols=258 Identities=16% Similarity=0.160 Sum_probs=170.3
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHH----------HhcccC
Q 009523 198 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 264 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~g-a~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~----------~~l~~~ 264 (532)
+.++...+|+++++++++ .+++++++||++|+..+++... ..+++||+.++.|++...... ......
T Consensus 89 ~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 168 (427)
T 3fq8_A 89 APCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSP 168 (427)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCS
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCC
Confidence 378899999999999985 4678888999999999985432 345789999999987321100 000011
Q ss_pred Cc------EEEEeCCCCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCC--
Q 009523 265 GI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-- 330 (532)
Q Consensus 265 Gv------~v~~vd~~dle~Le~al~~~--~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~-- 330 (532)
|+ .+..++.+|+++|+++++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||++....
T Consensus 169 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g 248 (427)
T 3fq8_A 169 GVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIA 248 (427)
T ss_dssp SSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTB
T ss_pred CCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 21 24556667999999998652 6899999999999999999 9999999999999999999987331
Q ss_pred ---cccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-hcCC--CccHHHHHHHHHhHHHH--HHHHH
Q 009523 331 ---NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTL--HLRVQ 402 (532)
Q Consensus 331 ---~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~--~~~~~~a~l~l~~l~tl--~~r~~ 402 (532)
.........|++ |++|.+++ | ..+|++++++++++.+..... ..+. ..++..++.+...++.+ ...++
T Consensus 249 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~ 324 (427)
T 3fq8_A 249 YGGVQEKFGVTPDLT--TLGKIIGG-G-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYE 324 (427)
T ss_dssp TTHHHHHTTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchhhHhcCCCCChh--hhhhhhhC-C-cceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 111223345665 57799995 3 467899999998887654211 1232 24677777666666543 23344
Q ss_pred HHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------------HHHHHHHHHH
Q 009523 403 QQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFIDA 466 (532)
Q Consensus 403 ~~~~~a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~------------~~~~~~~l~~ 466 (532)
+..++.+++.+.|++. +.... .++.|.+++|++... ......+.+.
T Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (427)
T 3fq8_A 325 YLDQITKRLSDGLLAIAQETGHAAC------------------GGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRG 386 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCE------------------EEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeE------------------EEEeeeEEEEEEecCccccccccccccHHHHHHHHHH
Confidence 5556666666666542 21111 123577899988542 1224456666
Q ss_pred cCCCceeecCC
Q 009523 467 LKIPYIAPSFG 477 (532)
Q Consensus 467 L~~~~i~vs~G 477 (532)
+...++.+..+
T Consensus 387 l~~~Gi~v~~~ 397 (427)
T 3fq8_A 387 MLEQGIYLAPS 397 (427)
T ss_dssp HHHTTEECCSS
T ss_pred HHHCCcEEecC
Confidence 65456555443
No 222
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.80 E-value=8.4e-18 Score=177.49 Aligned_cols=217 Identities=15% Similarity=0.091 Sum_probs=143.2
Q ss_pred CCCCCCCCchhHHHHHHHHHhhh-CC-------Cc--EEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHH
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALE-GA-------ES--TVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIET 259 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~-ga-------~~--~i~~sSG~~Ai~~al~all~--~Gd~VIv~~~~y~~t~~~~~~ 259 (532)
.+.|+- .....+|++++++++ +. ++ .+++++|++|+.+++..++. | |+|++++|+|.+.. .
T Consensus 65 ~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~----~ 137 (405)
T 3k7y_A 65 EKPYLL--GNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV----N 137 (405)
T ss_dssp CCCCCT--TSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH----H
T ss_pred CCCCCC--CCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH----H
Confidence 345553 234567888888765 21 22 35666667999999998887 8 99999999998755 3
Q ss_pred hcccCCcEEEEeCC-------CCHHHHHHhhcC-CCeeEEEEeCC-CCCCCcccC---HHHHHHHHHhCCCEEEEECCCC
Q 009523 260 VLPKMGITATVIDP-------ADMEGLEAALNN-NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 260 ~l~~~Gv~v~~vd~-------~dle~Le~al~~-~~tklV~lesP-~NptG~v~d---l~~I~~la~~~gi~lIvDet~a 327 (532)
.++..|.++..++. .|+++|++++++ .++++|++++| |||||.+++ +++|+++|+++|+++|+||+|.
T Consensus 138 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~ 217 (405)
T 3k7y_A 138 MIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ 217 (405)
T ss_dssp HHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT
T ss_pred HHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc
Confidence 45567888877753 178999998863 24688998765 899999998 5568888999999999999987
Q ss_pred CCCcc---------ccc-cc-CCcEEEECCccccCCCCCcEEEEEEe---ChHHHHHHHH----HhhhcCCCccHHHHHH
Q 009523 328 TPLNQ---------KAL-SL-GADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRN----LHHVLGGALNPNAAYL 389 (532)
Q Consensus 328 ~~~~~---------~~l-~~-gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~----~~~~~G~~~~~~~a~l 389 (532)
..... ..+ .. ...+++.|+||.|+-.|. +.|++++ ++++++.+.. .......+.+.+.+.+
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl-RiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 296 (405)
T 3k7y_A 218 GFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGE-RAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRI 296 (405)
T ss_dssp TTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTT-TEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred cccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccc-cceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHH
Confidence 54321 011 11 245889999999986664 4677643 5666655532 2222222333444333
Q ss_pred HHHhHH----------HHHHHHHHHHHHHHHHHHHHH
Q 009523 390 IIRGMK----------TLHLRVQQQNSTALRMAKILE 416 (532)
Q Consensus 390 ~l~~l~----------tl~~r~~~~~~~a~~la~~L~ 416 (532)
+...++ .+....++..++++.+.+.|+
T Consensus 297 ~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 297 LCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322222 122223445577778888888
No 223
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.79 E-value=8.9e-19 Score=183.04 Aligned_cols=281 Identities=12% Similarity=0.040 Sum_probs=187.5
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEe-CCHHHHHHHHHHHhccC--CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC
Q 009523 200 NPTTVVVEEKMSALEGAE--S-TVIM-ASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 273 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~--~-~i~~-sSG~~Ai~~al~all~~--Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~ 273 (532)
....++.|+.|++++|++ . ++++ ++|++++++++..++.+ ||+|++....+.+.. +...+++.|..++.++.
T Consensus 57 ~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~--~~~~a~~~G~~~~~~~~ 134 (377)
T 3e77_A 57 AKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAK--AAEEAKKFGTINIVHPK 134 (377)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHH--HHHHHTTTSEEEECSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHH--HHHHHHHhCCceEEecc
Confidence 345677899999999984 3 4554 57789999999999865 999988777666542 33567788988776653
Q ss_pred C-----CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcEEEECCc
Q 009523 274 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 347 (532)
Q Consensus 274 ~-----dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDivv~S~s 347 (532)
+ ++++++.++++ +|++|.+.+..|.||.+.|+ +|+++|+++++|.+++.+ .+++..+++ +++.|.+
T Consensus 135 ~~~~~~~~~~~~~~i~~-~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~ 206 (377)
T 3e77_A 135 LGSYTKIPDPSTWNLNP-DASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQ 206 (377)
T ss_dssp CSSSCSCCCGGGCCCCT-TCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGG
T ss_pred CCCcCCCCChHHhccCC-CccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEecc
Confidence 2 46677777776 79999998888889999998 478899999999998764 345555555 6889999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHH----------HHh--hhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIR----------NLH--HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 409 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~----------~~~--~~~G~~~~~~~a~l~l~~l~t------l~~r~~~~~~~a~ 409 (532)
|++|++| .|+++.++++++++. ... ....++++....+.+..+++. +..+.++..+.++
T Consensus 207 K~~gp~G---~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~ 283 (377)
T 3e77_A 207 KNVGSAG---VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQ 283 (377)
T ss_dssp GTTSCTT---CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCCCc---cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9998777 566766554432211 110 111234555555544444443 3344455667788
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCceeecCCCcccccccC
Q 009523 410 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGCESIVDQP 486 (532)
Q Consensus 410 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~---~~~~~~~l~~L~~~~i~vs~G~~~sl~~~p 486 (532)
++.+.|++.|++. + .|. .+.+ ..+.+++|.+++- .+....|++.+...++.+..|.-
T Consensus 284 ~l~~~L~~~~g~~-~-~~~---~~~~--------rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~------- 343 (377)
T 3e77_A 284 TIYEIIDNSQGFY-V-CPV---EPQN--------RSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHR------- 343 (377)
T ss_dssp HHHHHHHTSTTSE-E-CCS---CGGG--------BCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCT-------
T ss_pred HHHHHHHhcCCce-e-cCC---CHHH--------cCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCC-------
Confidence 8888888887763 2 221 1111 2355799999862 22224677766555665543310
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 487 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 487 a~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+.+|+|++..++++.++.|.++|++
T Consensus 344 ------------------~~g~iRiS~~~~~t~edId~l~~al~~ 370 (377)
T 3e77_A 344 ------------------SVGGIRASLYNAVTIEDVQKLAAFMKK 370 (377)
T ss_dssp ------------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ------------------cCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 124599999988777777777777754
No 224
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.78 E-value=2.5e-18 Score=180.34 Aligned_cols=282 Identities=12% Similarity=-0.014 Sum_probs=178.2
Q ss_pred CCCCchhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe
Q 009523 196 GRYGNPTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 271 (532)
Q Consensus 196 ~R~~~p~~~~Le~~lA~l~ga~---~~i~-~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v 271 (532)
++......++.|+.|++++|++ ++++ +++|++++++++..++++||+|++....+.+.. +...+++.| +++++
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~--~~~~a~~~G-~v~~v 143 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAAS--AIKEAKKYC-APQII 143 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHH--HHHHHTTTS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHH--HHHHHHHhC-CeEEE
Confidence 3334567788999999999984 2555 368889999999999999999876655555542 224466778 77776
Q ss_pred CCC--------CHHHHHHhhcCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEECCCCCC-CcccccccCCcE
Q 009523 272 DPA--------DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADL 341 (532)
Q Consensus 272 d~~--------dle~Le~al~~~~tklV~lesP~NptG~v-~dl~~I~~la~~~gi~lIvDet~a~~-~~~~~l~~gaDi 341 (532)
+.+ ++++++.++++ +|++|++.+..|.+|.+ .|+++|. +|+++++|.+++.+ .+++..+++ +
T Consensus 144 ~~~~~~~G~~~~~~~~~~~l~~-~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~~--~ 215 (386)
T 3qm2_A 144 DAKITVDGKRAVKPMREWQLSD-NAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRYG--V 215 (386)
T ss_dssp ECEEEETTEEEECCGGGCCCCT-TCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGCS--E
T ss_pred ecCcccCCCCCCchHHHhhcCC-CCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCccccC--E
Confidence 543 45777888877 79999987777888996 8988885 79999999998764 445555554 6
Q ss_pred EEECCccccCCCCCcEEEEEEeChHHHHHHHH----------Hh--hhcCCCccHHHHHHHHHhHHH------HHHHHHH
Q 009523 342 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----------LH--HVLGGALNPNAAYLIIRGMKT------LHLRVQQ 403 (532)
Q Consensus 342 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~----------~~--~~~G~~~~~~~a~l~l~~l~t------l~~r~~~ 403 (532)
++.|.+|++|+.| .|+++.++++++++.. .. ....++.+....+.+..+++. +..+.++
T Consensus 216 ~~~s~hK~lGP~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~ 292 (386)
T 3qm2_A 216 IYAGAQKNIGPAG---LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKI 292 (386)
T ss_dssp EEEETTTTTCCTT---EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred EEEecccccCCCc---cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 7799999998776 6777776655322110 00 001112222223333333333 2333445
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccccc
Q 009523 404 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 483 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~ 483 (532)
..+.++++.+.|++.+ +. ..+. .+.+ ..+++++|.+++.... ..++..|+..++.+..|.-
T Consensus 293 ~~~l~~~l~~~l~~~~-~~--~~~~---~~~~--------rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~g~~---- 353 (386)
T 3qm2_A 293 NQQKAELLYGVIDNSD-FY--RNDV---AQAN--------RSRMNVPFQLADNTLD-KVFLEESFAAGLHALKGHR---- 353 (386)
T ss_dssp HHHHHHHHHHHHHTCS-SE--ECCB---CGGG--------BCSSEEEEEESSGGGH-HHHHHHHHHTTEECCBCCT----
T ss_pred HHHHHHHHHHHHHHCC-Cc--ccCC---CHHH--------cCceEEEEECCCcccc-HHHHHHHHHCCCEEeCCCC----
Confidence 5566777777777652 21 1111 1111 2356999999852223 5666666666766544411
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 484 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 484 ~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+.+|+|++..++++.|+.|.++|++
T Consensus 354 ---------------------~~~~iRiS~~~~~t~edId~l~~~l~~ 380 (386)
T 3qm2_A 354 ---------------------VVGGMRASIYNAMPIEGVKALTDFMID 380 (386)
T ss_dssp ---------------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ---------------------CcCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 013499999998877778888777764
No 225
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.74 E-value=7.2e-17 Score=167.76 Aligned_cols=275 Identities=11% Similarity=0.008 Sum_probs=178.1
Q ss_pred chhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-
Q 009523 200 NPTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 274 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~---~~i~-~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~- 274 (532)
....++.|+.+++++|++ ++++ +++|++++++++..++ +||++++....+.+.. +...+++.|+++++++.+
T Consensus 49 ~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~--~~~~a~~~G~~v~~~~~~~ 125 (361)
T 3m5u_A 49 EEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKK--AIKEAQILGVNVKTVASSE 125 (361)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHH--HHHHHHHTTCCEEEEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHH--HHHHHHHcCCceEEEeccc
Confidence 356777899999999983 3455 4666799999999998 8886522222232322 223456678888776422
Q ss_pred ------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC-cccccccCCcEEEECCc
Q 009523 275 ------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 347 (532)
Q Consensus 275 ------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~-~~~~l~~gaDivv~S~s 347 (532)
++++ + +++ +|++|.+.+..|.+|.+.|. +++ +|+++++|.+++.+. +++.. ..|+++.|.+
T Consensus 126 ~g~~~~~~~~--~-l~~-~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~--~~d~~~~s~~ 193 (361)
T 3m5u_A 126 ESNFDHIPRV--E-FSD-NADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS--NIALFYGGVQ 193 (361)
T ss_dssp TTTSCSCCCC--C-CCT-TSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT--TEEEEEEETT
T ss_pred CcCCCcCChh--h-cCC-CCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc--cCCEEEEech
Confidence 3455 3 776 79999998888888999772 444 499999999977542 33333 3689999999
Q ss_pred cccCCCCCcEEEEEEeChHHHHHHHH--------Hh-----hhcCCCccHHHHHHHHHhHHHH------HHHHHHHHHHH
Q 009523 348 KFIGGHNDVLAGSISGSGKLVTQIRN--------LH-----HVLGGALNPNAAYLIIRGMKTL------HLRVQQQNSTA 408 (532)
Q Consensus 348 K~lgg~gd~~gG~lv~~~~li~~l~~--------~~-----~~~G~~~~~~~a~l~l~~l~tl------~~r~~~~~~~a 408 (532)
|++|++| .|+++.++++++++.. +. ....++++....+.+..+++.+ ..+.++..+.+
T Consensus 194 K~~gp~G---~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~ 270 (361)
T 3m5u_A 194 KNAGISG---LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKA 270 (361)
T ss_dssp TTSSCTT---CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hccCCCc---cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 9998776 6888888888776643 00 0111344544444444455433 33445556777
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCceeecCCCcccccccCc
Q 009523 409 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESIVDQPA 487 (532)
Q Consensus 409 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g-~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa 487 (532)
+++.+.|++.+++.....+ +.+ ..+++++|.+++ .... ..++..|+..++.+..|..
T Consensus 271 ~~l~~~L~~~~g~~~~~~~-----~~~--------rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~g~~-------- 328 (361)
T 3m5u_A 271 TMLYECIDLSNGFYKGHAD-----KKD--------RSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGLKGHR-------- 328 (361)
T ss_dssp HHHHHHHHTSTTSEEESSC-----GGG--------BCSSEEEEEESSCTTHH-HHHHHHHHHTTEECCBCCT--------
T ss_pred HHHHHHHHHCCCeeeccCC-----HHH--------cCCeEEEEECCCchhhh-HHHHHHHHHCCCEEecCCC--------
Confidence 7888888887765223211 111 135689999986 1122 3566666666776554411
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009523 488 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 531 (532)
Q Consensus 488 ~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli~dL~~AL~~ 531 (532)
..+.+|+|++..++++.++.+.++|++
T Consensus 329 -----------------~~g~iRiS~~~~~t~edId~l~~al~~ 355 (361)
T 3m5u_A 329 -----------------ILGGIRASIYNALNLDQVKTLCEFMKE 355 (361)
T ss_dssp -----------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred -----------------ccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 014599999998877777888777764
No 226
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.59 E-value=1.4e-19 Score=194.22 Aligned_cols=240 Identities=15% Similarity=0.142 Sum_probs=159.4
Q ss_pred CCCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEe
Q 009523 197 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 271 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~-ga~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~v 271 (532)
+|.++...+|+++|++++ +.+.+++++||++|+..+++... ..+|+||+.+..|++.......-....|+ .+..+
T Consensus 136 ~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~ 215 (465)
T 2yky_A 136 STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG 215 (465)
Confidence 467888999999999999 66788999999999999988642 34589999999998743211100012344 44455
Q ss_pred CCCCHHHHHHhhcC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCCCc-----ccccccCCc
Q 009523 272 DPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGAD 340 (532)
Q Consensus 272 d~~dle~Le~al~~--~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~~~-----~~~l~~gaD 340 (532)
+.+|+++|++++++ .++++|++|++.|++|.+.+ +++|.++|+++|+++|+||++. +.. +.......|
T Consensus 216 ~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pD 294 (465)
T 2yky_A 216 VYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISAD 294 (465)
Confidence 66789999999973 26999999887777998877 8999999999999999999987 311 111122345
Q ss_pred EEEECCccccCCCCCcEEEEEEeChHHHHHHHHH--h---hhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHH
Q 009523 341 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--H---HVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAK 413 (532)
Q Consensus 341 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~---~~~G~~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~ 413 (532)
++ |++|++|+ | ...|++++++++++.+... . .......+|..+..++..++.+.. ..++..+..+++.+
T Consensus 295 i~--t~sK~lg~-G-~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~ 370 (465)
T 2yky_A 295 LT--TLGKYIGG-G-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRA 370 (465)
Confidence 54 78999997 4 4678999999998877651 1 111123456666555555554421 22333344445555
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009523 414 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 455 (532)
Q Consensus 414 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g 455 (532)
.|++.. .. ++. ....++.|.+++|++.+
T Consensus 371 ~L~~~~--~~--~~~----------~~~v~g~G~~~~i~~~~ 398 (465)
T 2yky_A 371 NLNRIA--VE--NQA----------PLQFTGLGSLGTIHFSR 398 (465)
Confidence 444321 00 110 01124578899998864
No 227
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.73 E-value=1.2e-16 Score=178.73 Aligned_cols=213 Identities=12% Similarity=0.126 Sum_probs=155.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC--
Q 009523 198 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 274 (532)
Q Consensus 198 ~~~p~~~~Le~~lA~l~ga~~~i~~sSG~-~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-- 274 (532)
.+.....++|+.+|+++|+++++++++|+ .|+..++.+++++||+|++++++|.+.... +...|.++++++..
T Consensus 192 ~~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~----l~lsGa~pv~v~~~~~ 267 (715)
T 3n75_A 192 DHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHL----MMMSDVTPIYFRPTRN 267 (715)
T ss_dssp TTBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHSCCEEEEECCCBC
T ss_pred CCcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEecccc
Confidence 45567899999999999999999999996 999999999999999999999999987643 44568888887642
Q ss_pred -------------CHHHHHHhhcCC-Cee---EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-----
Q 009523 275 -------------DMEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----- 332 (532)
Q Consensus 275 -------------dle~Le~al~~~-~tk---lV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~----- 332 (532)
|+++|+++++++ ++| +|++++| |++|.+.|+++|.++|++++ +++|++++..+.+
T Consensus 268 ~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccc
Confidence 799999999742 345 8999999 89999999999999998764 7999998765421
Q ss_pred --cccccC--CcEE---EECCccccCCCCCcEEEEEEeChHH-HHHHHHHhhhcC-CCccHHHHHHHHHhHHH-----HH
Q 009523 333 --KALSLG--ADLV---LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLG-GALNPNAAYLIIRGMKT-----LH 398 (532)
Q Consensus 333 --~~l~~g--aDiv---v~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~~~~~G-~~~~~~~a~l~l~~l~t-----l~ 398 (532)
..+..| +|++ ++|+||++++.. .+|++..++++ .+.+......+. +.+++...+.+..+++. -.
T Consensus 345 ~~~al~~g~~aD~vii~~~S~hKtL~glt--qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~ 422 (715)
T 3n75_A 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGK 422 (715)
T ss_dssp TSSTTSSSCCTTCEEEEEECHHHHSSCCT--TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHH
T ss_pred cccccccCcCCCEEEEEEecccccccCCC--CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccH
Confidence 223333 6766 899999999853 36777765432 233444333333 34444433322323322 23
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q 009523 399 LRVQQQNSTALRMAKILEAHP 419 (532)
Q Consensus 399 ~r~~~~~~~a~~la~~L~~~p 419 (532)
.++++..++++++.+.|++.+
T Consensus 423 ~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 423 RLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 456677788888888887654
No 228
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.71 E-value=2.7e-16 Score=169.07 Aligned_cols=275 Identities=13% Similarity=0.135 Sum_probs=162.0
Q ss_pred hHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHhc-------c------------------CC---CEEEEcCCCCc
Q 009523 202 TTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV-------P------------------AG---GHIVTTTDCYR 251 (532)
Q Consensus 202 ~~~~Le~~lA~l~--ga~~~i~~sSG~~Ai~~al~all-------~------------------~G---d~VIv~~~~y~ 251 (532)
..+.++++|+++. +.+.+++++||++|+..+++.+. + || ++||+.++.|+
T Consensus 111 l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yH 190 (472)
T 1ohv_A 111 FVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFH 190 (472)
T ss_dssp HHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcc
Confidence 3444455455555 44678999999999999998763 1 46 89999999998
Q ss_pred chHHHHHHhcc-----cCCcE-----EEEeCC-----------------CCHHHHHHhhcCC-----CeeEEEEeCCCCC
Q 009523 252 KTRIFIETVLP-----KMGIT-----ATVIDP-----------------ADMEGLEAALNNN-----NVSLFFTESPTNP 299 (532)
Q Consensus 252 ~t~~~~~~~l~-----~~Gv~-----v~~vd~-----------------~dle~Le~al~~~-----~tklV~lesP~Np 299 (532)
+.......+.. ..+.. ...++. .|+++|+++++++ ++++|++|+.+|+
T Consensus 191 g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~ 270 (472)
T 1ohv_A 191 GRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSE 270 (472)
T ss_dssp CSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCT
T ss_pred cccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCC
Confidence 84322211110 11111 111110 1578899888651 5999999988899
Q ss_pred CCcccC----HHHHHHHHHhCCCEEEEECCCCCC-Cc---ccccccC----CcEEEECCccc-cCCCCCcEEEEEEeChH
Q 009523 300 FLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LN---QKALSLG----ADLVLHSATKF-IGGHNDVLAGSISGSGK 366 (532)
Q Consensus 300 tG~v~d----l~~I~~la~~~gi~lIvDet~a~~-~~---~~~l~~g----aDivv~S~sK~-lgg~gd~~gG~lv~~~~ 366 (532)
+|.+.+ +++|.++|++||+++|+||++... .. ......| +|++ |++|. ++ ||+++ +++
T Consensus 271 ~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~-~~~ 341 (472)
T 1ohv_A 271 GGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH-KEE 341 (472)
T ss_dssp TTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE-CGG
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC-chh
Confidence 999887 999999999999999999997631 11 1111234 6776 57799 55 47766 655
Q ss_pred HHHHHHHHhhhcCC-CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCC-CCCCchhhhHhhhc
Q 009523 367 LVTQIRNLHHVLGG-ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPG-LKSHPEHHIATQQM 442 (532)
Q Consensus 367 li~~l~~~~~~~G~-~~~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~~Pg-l~s~p~~~l~~~~~ 442 (532)
+. .+.... ..+. ..++..+..++..++.+.. ..++..+..+++.+.|++... .+|. + ...
T Consensus 342 ~~-~~~~~~-~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~v----------~~~ 405 (472)
T 1ohv_A 342 FR-PNAPYR-IFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQA----RYPQFI----------SRV 405 (472)
T ss_dssp GS-CSSSSS-SCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH----HCTTTC----------EEE
T ss_pred hc-cccccc-ccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh----hCCCcE----------Eee
Confidence 42 111111 1122 3466666666666654432 234444556666666654210 1121 0 001
Q ss_pred CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009523 443 TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 522 (532)
Q Consensus 443 ~g~G~~vsf~l~g~~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~ed~~dli 522 (532)
++.|.+++|++++ ......+.+.|...++.+..+ ..+.|||++++..+++.+
T Consensus 406 ~~~g~~~~~~~~~-~~~~~~~~~~l~~~Gv~~~~~---------------------------g~~~iRi~~~~~~t~e~i 457 (472)
T 1ohv_A 406 RGRGTFCSFDTPD-ESIRNKLISIARNKGVMLGGC---------------------------GDKSIRFRPTLVFRDHHA 457 (472)
T ss_dssp EEETTEEEEECSS-HHHHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHH
T ss_pred cCCceEEEEEeCC-hhHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCCCCCHHHH
Confidence 2357799998864 234556666664445433221 146899988875544444
Q ss_pred HHHHHHH
Q 009523 523 ADVLQAL 529 (532)
Q Consensus 523 ~dL~~AL 529 (532)
+.+.++|
T Consensus 458 ~~~~~~l 464 (472)
T 1ohv_A 458 HLFLNIF 464 (472)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444333
No 229
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.66 E-value=1.1e-14 Score=154.16 Aligned_cols=220 Identities=16% Similarity=0.084 Sum_probs=134.5
Q ss_pred CCCCCCCCchhHHHHHHHHHhhh-CC----C--cEEEeCCHHHHHHHHHH----HhccCCCEEEEcCCCCcchHHHHHHh
Q 009523 192 SFEYGRYGNPTTVVVEEKMSALE-GA----E--STVIMASGMSASTVMLL----ALVPAGGHIVTTTDCYRKTRIFIETV 260 (532)
Q Consensus 192 ~~~Y~R~~~p~~~~Le~~lA~l~-ga----~--~~i~~sSG~~Ai~~al~----all~~Gd~VIv~~~~y~~t~~~~~~~ 260 (532)
.+.|. +.....+|+++++++. |. + ..+.+.+|+.|+..++. .++.|||+|++++|+|+.....+
T Consensus 80 ~~~Y~--p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~--- 154 (420)
T 4h51_A 80 DYEYL--PISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVV--- 154 (420)
T ss_dssp CCCCC--CTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHH---
T ss_pred CCCCC--CcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHH---
Confidence 45565 4455667888888865 32 1 23446677777665554 34579999999999998765444
Q ss_pred cccCCcE-EEE---eCC----CCHHHHHHhhc--CCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEECCCC
Q 009523 261 LPKMGIT-ATV---IDP----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 261 l~~~Gv~-v~~---vd~----~dle~Le~al~--~~~tklV~lesP~NptG~v~d---l~~I~~la~~~gi~lIvDet~a 327 (532)
+..|.+ +.. .+. .|.+.+.+.++ ..+++++++.+|+||||.+.+ +++|+++|+++++++++|++|.
T Consensus 155 -~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~ 233 (420)
T 4h51_A 155 -KAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQ 233 (420)
T ss_dssp -HHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred -HHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhh
Confidence 334543 322 221 15666666553 226889999999999999987 5688888999999999999986
Q ss_pred CCCccc----c------ccc-CCcEEEECCccccCCCCCcEEEEEEeChHHHH-------HHHHHhhhcCCCccHHHHHH
Q 009523 328 TPLNQK----A------LSL-GADLVLHSATKFIGGHNDVLAGSISGSGKLVT-------QIRNLHHVLGGALNPNAAYL 389 (532)
Q Consensus 328 ~~~~~~----~------l~~-gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-------~l~~~~~~~G~~~~~~~a~l 389 (532)
...... . .+. ..-+++.|+||.++..|.. .|++++..+..+ .+....+......+...+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R-vG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~ 312 (420)
T 4h51_A 234 GYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSER-AGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARL 312 (420)
T ss_dssp TTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGC-EEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred hhccCCcccchHHHHhHHhhCceEEEEeccccccccccCc-eEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHH
Confidence 543211 1 011 2348889999999877754 666665432222 22222333333444444443
Q ss_pred HHHhHH----------HHHHHHHHHHHHHHHHHHHHHhC
Q 009523 390 IIRGMK----------TLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 390 ~l~~l~----------tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
+...+. .+....++..+.++.+.+.|++.
T Consensus 313 ~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 313 AHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332222 12222334445666777777764
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.61 E-value=2.9e-14 Score=152.14 Aligned_cols=234 Identities=15% Similarity=0.143 Sum_probs=159.7
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHHh--cccCCcEEEEeCC
Q 009523 199 GNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV--LPKMGITATVIDP 273 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga-~~~i~~sSG~~Ai~~al~all--~~Gd~VIv~~~~y~~t~~~~~~~--l~~~Gv~v~~vd~ 273 (532)
.++...+|++.|+++... +.+.+++||++|+..+++... ...++||.....|++........ ..........++.
T Consensus 125 ~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~ 204 (454)
T 4ao9_A 125 HNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY 204 (454)
T ss_dssp EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT
T ss_pred CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC
Confidence 356677899999998854 678888999999999997553 23468999899998832110000 0112335566788
Q ss_pred CCHHHHHHhhcCC--CeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEECCCCC----CCcccccccCCcEEE
Q 009523 274 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLNQKALSLGADLVL 343 (532)
Q Consensus 274 ~dle~Le~al~~~--~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~----~~~~~~l~~gaDivv 343 (532)
+|++.+++.++++ ++.+|++|...+..|.+.| +++|.++|++||+++|+||++.. ...+.....-.|+++
T Consensus 205 nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t 284 (454)
T 4ao9_A 205 NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTT 284 (454)
T ss_dssp TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEE
T ss_pred chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEEE
Confidence 8999999988642 5899999999888898887 89999999999999999999742 122233344568887
Q ss_pred ECCccccCCCCCcEEEEEEeChHHHHHHHHHh--hhcCCC--ccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh
Q 009523 344 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA--LNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 417 (532)
Q Consensus 344 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~--~~~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~ 417 (532)
+.|.+||+. ..|++++++++++.+.... ..++++ .+|..+..++..|+.+. ...++..++.++|.+.|++
T Consensus 285 --~gK~lggG~--Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 285 --LGKYIGGGM--SFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNA 360 (454)
T ss_dssp --EEGGGGTTS--SCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --eccccCCCC--cceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHH
Confidence 889998753 5788889998887664311 112332 35777777666666542 2334444555666655543
Q ss_pred ----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009523 418 ----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 454 (532)
Q Consensus 418 ----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~ 454 (532)
++.+..| +|.|.|+.+++.
T Consensus 361 l~~~~~~~~~v------------------rg~G~m~gi~f~ 383 (454)
T 4ao9_A 361 LCANEGVAMQF------------------TGIGSLMNAHFV 383 (454)
T ss_dssp HHHHHTBSCEE------------------EEETTEEEEESC
T ss_pred HHhhCCCCEEE------------------eeeceEEEEEEe
Confidence 3322222 467889999874
No 231
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.61 E-value=5.7e-14 Score=147.28 Aligned_cols=254 Identities=17% Similarity=0.157 Sum_probs=155.7
Q ss_pred CCCCCCC--CchhHHHHH----HHHHhhhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHH-H
Q 009523 192 SFEYGRY--GNPTTVVVE----EKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-T 259 (532)
Q Consensus 192 ~~~Y~R~--~~p~~~~Le----~~lA~l~ga~~-----~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~-~ 259 (532)
+|---|| |+..++++| ++..+++|++. .+-.-||+.|+..++.++++|||+|+..+..+++....-. .
T Consensus 85 GyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~ 164 (490)
T 3ou5_A 85 GYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMS 164 (490)
T ss_dssp C----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC-------------
T ss_pred CCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccC
Confidence 4444453 455555554 55667899865 3677899999999999999999999999999887532110 0
Q ss_pred hccc---CCcEEEE----eCC----CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC--
Q 009523 260 VLPK---MGITATV----IDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-- 326 (532)
Q Consensus 260 ~l~~---~Gv~v~~----vd~----~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~-- 326 (532)
...+ .|.-+.. ++. .|.+++++..++.++|+|++-.- -..+..|.+++.++|++.|++|++|-++
T Consensus 165 ~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~S--aY~r~id~~~~reIAd~vGA~Lm~DmAHia 242 (490)
T 3ou5_A 165 DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS--AYARLIDYARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp ---------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCS--SCCSCCCHHHHHHHHHHHTCEEEEECGGGH
T ss_pred CCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCc--cCccccCHHHHHHHHhhcccEEEechhhhh
Confidence 0001 1111111 111 28899999887778999998332 3567789999999999999999999994
Q ss_pred ---CCCCcccccccCCcEEEECCccccCCCCCcEEEEEEeCh---------------HHHHHHHHHh--hhcCCCccHHH
Q 009523 327 ---ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNLH--HVLGGALNPNA 386 (532)
Q Consensus 327 ---a~~~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~---------------~li~~l~~~~--~~~G~~~~~~~ 386 (532)
+.+...+|+++ +|+|+.|.||.|.|+. ||++..++ ++.+++.... ...|+...-..
T Consensus 243 GLVA~g~~psP~~~-ADvVTtTTHKTLrGPr---GG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~I 318 (490)
T 3ou5_A 243 GLVAAKVIPSPFKH-ADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAI 318 (490)
T ss_dssp HHHHTTSSCCGGGT-CSEEEEESSSTTCSCS---CEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHH
T ss_pred hhhcccccCCcccc-ceEEeccccccccCCC---ceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHH
Confidence 34556788887 9999999999999984 89998765 4556665532 22333322222
Q ss_pred HHHHH---HhH-HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---CHHH
Q 009523 387 AYLII---RGM-KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTA 459 (532)
Q Consensus 387 a~l~l---~~l-~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g---~~~~ 459 (532)
+..+. ..+ .......++..+|++.|++.|.+.. + ++..-+..+ .++.+.+.. +...
T Consensus 319 AAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G-~-~vvsGgTdn---------------HlvLvDl~~~g~tG~~ 381 (490)
T 3ou5_A 319 AAVAVALKQACTPMFREYSLQVLKNARAMADALLERG-Y-SLVSGGTDN---------------HLVLVDLRPKGLDGAR 381 (490)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-C-EEGGGSCSS---------------SEEEEECGGGTCCHHH
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCC-C-eeecCCCCc---------------eEEEEeccccCCCHHH
Confidence 22222 112 2345566788899999999998863 3 233333322 367777753 2355
Q ss_pred HHHHHHHcC
Q 009523 460 TIKFIDALK 468 (532)
Q Consensus 460 ~~~~l~~L~ 468 (532)
+++.++...
T Consensus 382 ae~~Le~ag 390 (490)
T 3ou5_A 382 AERVLELVS 390 (490)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 666666654
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.60 E-value=9.8e-14 Score=148.41 Aligned_cols=291 Identities=15% Similarity=0.097 Sum_probs=175.7
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHH-HHHHh---------ccc
Q 009523 199 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRI-FIETV---------LPK 263 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga---~~~i~~sSG~~Ai~~al~al--l~~Gd~VIv~~~~y~~t~~-~~~~~---------l~~ 263 (532)
+++...+|.++|+++... +.+++++||++|+..+++.. .....+||.....|++... .+... ...
T Consensus 105 ~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p 184 (456)
T 4atq_A 105 PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGP 184 (456)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCC
Confidence 456667788999998854 45788899999999999743 2345689999999988432 11110 011
Q ss_pred CCcEEEEeCCC-----------CHHH-------HHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEE
Q 009523 264 MGITATVIDPA-----------DMEG-------LEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVC 321 (532)
Q Consensus 264 ~Gv~v~~vd~~-----------dle~-------Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~lI 321 (532)
....+..++.. +.+. +++.+..+++.+|++|......|.+.+ +++|.++|++||+++|
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI 264 (456)
T 4atq_A 185 FAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFI 264 (456)
T ss_dssp CCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred ccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceE
Confidence 11233344321 2222 333333346999999999887887765 8999999999999999
Q ss_pred EECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH
Q 009523 322 IDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 395 (532)
Q Consensus 322 vDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~~~~~a~l~l~~l~ 395 (532)
+||++... +.+.....-.||++ ++|.+||+. ..|.+++++++.+.+..........-+|..+..++..++
T Consensus 265 ~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lggg~--P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~ 340 (456)
T 4atq_A 265 ADEVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIAGGL--PLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAID 340 (456)
T ss_dssp EECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTS--SCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred ecccccccCCccccccccccCCCCchhh--hhhcccCcC--CceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence 99996431 22344445579998 679988653 567788888877765432221112236787777777777
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC------CHHHHHHH
Q 009523 396 TLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DLTATIKF 463 (532)
Q Consensus 396 tl~~r--~~~~~~~a~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g------~~~~~~~~ 463 (532)
.+... +++..+..+++.+.|++ ++. ..+|. -...+|.|.|+.|++.. +.+...++
T Consensus 341 ~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~---~~~~~----------v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v 407 (456)
T 4atq_A 341 TMEQHDLNGRARHIEELALGKLRELAAELSA---GGGSV----------VGDIRGRGAMLAIELVQPGSKEPNAELTKAV 407 (456)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHCC--------C----------EEEEEEETTEEEEEEBCTTSCCBCHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhccc---ccCCc----------eEEeeecceEEEEEEecCCCCCcCHHHHHHH
Confidence 65421 22222333333333332 211 00010 01235678999999953 22445566
Q ss_pred HHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 464 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 464 l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
...+...|+-+... |...+.|||...+ ++.++.++.|+++|++
T Consensus 408 ~~~~~~~Gvl~~~~-------------------------g~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 408 AAACLKEGVIILTC-------------------------GTYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHTTEECEEE-------------------------CTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEec-------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 66665444332211 1224678887543 5667777888888764
No 233
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.56 E-value=4.1e-13 Score=142.40 Aligned_cols=218 Identities=11% Similarity=0.097 Sum_probs=141.7
Q ss_pred CCCCchhHHH----HHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHhccC----CCEEEEcCCCCcchHHHHHHhcccC
Q 009523 196 GRYGNPTTVV----VEEKMSALEGAES---TVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKM 264 (532)
Q Consensus 196 ~R~~~p~~~~----Le~~lA~l~ga~~---~i~~sSG~~Ai~~al~all~~----Gd~VIv~~~~y~~t~~~~~~~l~~~ 264 (532)
...++|.... +...+.+++|.++ .+++++++.++.+++++.+++ |+.||+++.+|.+... .+...
T Consensus 89 ~~~~~~~~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k----Al~l~ 164 (450)
T 3bc8_A 89 KAAGSSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK----SMVTA 164 (450)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH----HHHHT
T ss_pred cccCCcHHHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH----HHHHc
Confidence 3345555444 4556666677643 367766664444455555454 8999999999988664 44456
Q ss_pred CcEEEEeCC--------CCHHHHHHhhcCCC--eeEEEEeCCC-CCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc-
Q 009523 265 GITATVIDP--------ADMEGLEAALNNNN--VSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ- 332 (532)
Q Consensus 265 Gv~v~~vd~--------~dle~Le~al~~~~--tklV~lesP~-NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~- 332 (532)
|+..+++++ .|+++|+++|+++. .+++++.+|+ +.+|.+.|+++|+++||+||++++||++|+.....
T Consensus 165 Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~ 244 (450)
T 3bc8_A 165 GFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKC 244 (450)
T ss_dssp TCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHH
T ss_pred CCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhh
Confidence 777777754 28999999996521 3455555665 44678999999999999999999999999875432
Q ss_pred -----ccccc-CCcEEEECCccccCCCCCcEEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHH--hHHHHHHHHHH
Q 009523 333 -----KALSL-GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQ 403 (532)
Q Consensus 333 -----~~l~~-gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l~--~l~tl~~r~~~ 403 (532)
..+.. ++|+++.|+||++..+- .++++.. +++.++.+...........+.+..|..+. |.+.+...+++
T Consensus 245 ~~l~~~a~~~~~AD~~v~S~HK~l~a~~--~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~ 322 (450)
T 3bc8_A 245 MHLIQQGARVGRIDAFVQSLDKNFMVPV--GGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKE 322 (450)
T ss_dssp HHHHHHHHHHSCCCEEEEEHHHHHSCCS--SCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhcccCCCEEEECCccCCCchh--ccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11233 79999999999998764 3555554 55666655443211122222234444332 33445555666
Q ss_pred HHHHHHHHHHHHHhCC
Q 009523 404 QNSTALRMAKILEAHP 419 (532)
Q Consensus 404 ~~~~a~~la~~L~~~p 419 (532)
..++++++.+.|++.+
T Consensus 323 ~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 323 RKEMFVYLSTQLKKLA 338 (450)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhH
Confidence 6788888888887765
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.53 E-value=8.2e-13 Score=141.84 Aligned_cols=284 Identities=14% Similarity=0.143 Sum_probs=175.2
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchH-HHHHHh----ccc
Q 009523 199 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTR-IFIETV----LPK 263 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga--~~~i~~sSG~~Ai~~al~all-------~~G-d~VIv~~~~y~~t~-~~~~~~----l~~ 263 (532)
.++...+|.++|+++.+. +.+++++||++|++.+++... +++ .+||.....|++.. ..+... -+.
T Consensus 109 ~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~ 188 (473)
T 4e3q_A 109 MSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSV 188 (473)
T ss_dssp EEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGG
T ss_pred cCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccc
Confidence 456677888999999864 578899999999999997542 133 47888888888832 211110 011
Q ss_pred CC---cEEEEeCCC------------------CHHHHHHhhc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHh
Q 009523 264 MG---ITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 315 (532)
Q Consensus 264 ~G---v~v~~vd~~------------------dle~Le~al~---~~~tklV~lesP~NptG~v~d----l~~I~~la~~ 315 (532)
++ .....++.. ..+++++.+. .+++.+|++|......|.+.+ +++|.++|++
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~ 268 (473)
T 4e3q_A 189 FGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRK 268 (473)
T ss_dssp GTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcc
Confidence 11 112222211 1234455443 225899999999887887765 8999999999
Q ss_pred CCCEEEEECCCCCC------CcccccccCCcEEEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh-----hcCCC--c
Q 009523 316 KGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-----VLGGA--L 382 (532)
Q Consensus 316 ~gi~lIvDet~a~~------~~~~~l~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-----~~G~~--~ 382 (532)
||+++|.||++... +.+.....-.|+++ +.|.++++. ...|++++++++.+.+..... .+|.+ -
T Consensus 269 ~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~gG~-~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~G 345 (473)
T 4e3q_A 269 YDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTAGF-FPMGAVILGPELSKRLETAIEAIEEFPHGFTASG 345 (473)
T ss_dssp TTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTT
T ss_pred cceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccCCC-CCcccccccHHHHHHhccccccccccccCCCCCC
Confidence 99999999996432 22333445579998 789998764 356788889998887754321 12322 3
Q ss_pred cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh---CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-
Q 009523 383 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD- 456 (532)
Q Consensus 383 ~~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~---~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~- 456 (532)
+|..+..++..++.+.. .+++..+...++.+.|++ +|.|..| +|.|.|+.+++..+
T Consensus 346 npla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v------------------RG~Gl~~gielv~~~ 407 (473)
T 4e3q_A 346 HPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEY------------------RGIGFMWALEAVKDK 407 (473)
T ss_dssp CHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEEEEEECSBT
T ss_pred CcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEE------------------eecceEEEEEEecCc
Confidence 67888777777776542 123333444555555543 3333333 56788999998421
Q ss_pred ---------HHHHHHHHHHcCCCceeecCCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHH
Q 009523 457 ---------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKA 523 (532)
Q Consensus 457 ---------~~~~~~~l~~L~~~~i~vs~G~~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlS----vG~ed~~dli~ 523 (532)
.....++...+...++-+. |. .+.|||+ +..++.+++++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~----------~~------------------g~~i~l~PPL~it~~eid~~~~ 459 (473)
T 4e3q_A 408 ASKTPFDGNLSVSERIANTCTDLGLICR----------PL------------------GQSVVLCPPFILTEAQMDEMFD 459 (473)
T ss_dssp TTTBCCCGGGCHHHHHHHHHHHTTEECE----------EE------------------TTEEEECCCTTCCHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHCCcEEE----------ec------------------CCEEEEeCCCCCCHHHHHHHHH
Confidence 1223445555443333221 10 2456665 33466788888
Q ss_pred HHHHHHhh
Q 009523 524 DVLQALHA 531 (532)
Q Consensus 524 dL~~AL~~ 531 (532)
.|+++|++
T Consensus 460 ~l~~al~~ 467 (473)
T 4e3q_A 460 KLEKALDK 467 (473)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888864
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.51 E-value=2.3e-13 Score=143.25 Aligned_cols=194 Identities=9% Similarity=0.095 Sum_probs=130.9
Q ss_pred EEEeCCHHHHHHHHHHHhccC----CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC--------CCHHHHHHhhcCC
Q 009523 219 TVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNN 286 (532)
Q Consensus 219 ~i~~sSG~~Ai~~al~all~~----Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~--------~dle~Le~al~~~ 286 (532)
.+++++++.++.+++++.+++ ||.||+++.+|.+.+.. +...|++.+++++ .|+++++++|+++
T Consensus 137 ~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kA----liL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ 212 (501)
T 3hl2_A 137 CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKS----MITAGFEPVVIENVLEGDELRTDLKAVEAKVQEL 212 (501)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHH----HHHTTCEEEEECEEEETTEEEECHHHHHHHHHHH
T ss_pred EEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHH----HHHcCCeEEEEeeeecccccCCCHHHHHHHHHhc
Confidence 456666666677767666664 49999999999986643 3445777777764 2789999999653
Q ss_pred ---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCcc------cccccC-CcEEEECCccccCCCCCc
Q 009523 287 ---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLG-ADLVLHSATKFIGGHNDV 356 (532)
Q Consensus 287 ---~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~~------~~l~~g-aDivv~S~sK~lgg~gd~ 356 (532)
.+.+|+.++++|..+.+.|+++|+++||+||++++|||+|+..+.. ..+..| +|+++.|.||.+--+-
T Consensus 213 ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpI-- 290 (501)
T 3hl2_A 213 GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPV-- 290 (501)
T ss_dssp CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCS--
T ss_pred CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeec--
Confidence 2344555444554557789999999999999999999999876521 234568 9999999999986552
Q ss_pred EEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009523 357 LAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAH 418 (532)
Q Consensus 357 ~gG~lv~-~~~li~~l~~~~~~~G~~~~~~~a~l~l--~~l~tl~~r~~~~~~~a~~la~~L~~~ 418 (532)
.||++.. ++++++++.......-...+....|+++ -|.+.+...+++..++++++.+.|++.
T Consensus 291 GG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~l 355 (501)
T 3hl2_A 291 GGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 (501)
T ss_dssp SCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344434 5567776643221001112223345443 344556667778888888988888774
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.47 E-value=3.9e-13 Score=153.57 Aligned_cols=286 Identities=13% Similarity=0.121 Sum_probs=172.9
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHhc-----cCC------------CEEEEcCCCCcch-HH
Q 009523 197 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-----PAG------------GHIVTTTDCYRKT-RI 255 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~g---a~~~i~~sSG~~Ai~~al~all-----~~G------------d~VIv~~~~y~~t-~~ 255 (532)
.+.++...+|.++|+++.+ .+.+++++||++|++.+++..+ +.| .+||..+..|++. ..
T Consensus 420 ~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~g 499 (831)
T 4a0g_A 420 ENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLG 499 (831)
T ss_dssp TEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCcee
Confidence 3457778899999999987 3578999999999999987652 122 3688888888873 32
Q ss_pred HHHHhc----c---------cCCc-------------EEEEeCC------------CC------------------HHHH
Q 009523 256 FIETVL----P---------KMGI-------------TATVIDP------------AD------------------MEGL 279 (532)
Q Consensus 256 ~~~~~l----~---------~~Gv-------------~v~~vd~------------~d------------------le~L 279 (532)
.+...- . ..+. .....+. .+ .++|
T Consensus 500 als~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 579 (831)
T 4a0g_A 500 AMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYL 579 (831)
T ss_dssp HHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHH
T ss_pred eeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHH
Confidence 222110 0 0000 0011110 12 2567
Q ss_pred HHhhc-------CCCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCCCEEEEECCCCCC------CcccccccCCcE
Q 009523 280 EAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADL 341 (532)
Q Consensus 280 e~al~-------~~~tklV~lesP-~NptG~v~d----l~~I~~la~~~gi~lIvDet~a~~------~~~~~l~~gaDi 341 (532)
++.++ ..++.+|++|.. .+..|.+.+ +++|.++|++||+++|+||++... +.......-.|+
T Consensus 580 e~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi 659 (831)
T 4a0g_A 580 SKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDI 659 (831)
T ss_dssp HHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSE
T ss_pred HHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcE
Confidence 77775 235899999997 788887765 899999999999999999986431 112223344688
Q ss_pred EEECCccccCCCCCcEEEEEEeChHHHHHHHHHhh----hcC--CCccHHHHHHHHHhHHHHHHH--HHHHHHH------
Q 009523 342 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----VLG--GALNPNAAYLIIRGMKTLHLR--VQQQNST------ 407 (532)
Q Consensus 342 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~----~~G--~~~~~~~a~l~l~~l~tl~~r--~~~~~~~------ 407 (532)
++ ++|.++++ -+..|++++++++++.+..... .+| ...+|..+..++..++.+... .++..++
T Consensus 660 it--lsK~L~gG-~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~ 736 (831)
T 4a0g_A 660 AC--FAKLLTGG-MVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRE 736 (831)
T ss_dssp EE--ECGGGGTT-SSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCC
T ss_pred EE--EecccccC-ccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 75 88999873 2356888999998887643210 122 234688887777777655310 0011011
Q ss_pred --HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-------HHHHHHHHHcCCCceeecCCC
Q 009523 408 --ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-------TATIKFIDALKIPYIAPSFGG 478 (532)
Q Consensus 408 --a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~G~~vsf~l~g~~-------~~~~~~l~~L~~~~i~vs~G~ 478 (532)
.+.+.+.+.++|.|..| ++.|.|+.+++..+. ..+..+...+...|+.+..
T Consensus 737 ~l~~~l~~~l~~~~~v~~v------------------rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p-- 796 (831)
T 4a0g_A 737 LWDEELVQQISSHSAVQRV------------------VVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRP-- 796 (831)
T ss_dssp CSCHHHHHHHHHSTTEEEE------------------EEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCC--
T ss_pred HHHHHHHHHHhhCCCceeE------------------eecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEe--
Confidence 11233445556655444 346889999986421 2345566665544543321
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009523 479 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 531 (532)
Q Consensus 479 ~~sl~~~pa~~s~~~~~~~~~~~~gi~~~~IRlSvG~----ed~~dli~dL~~AL~~ 531 (532)
. .+.|||+... ++.+++++.|.++|++
T Consensus 797 --------~------------------g~~lrl~pp~~~t~e~id~~~~~l~~~l~~ 827 (831)
T 4a0g_A 797 --------L------------------GNVIYLMCGPCTSPEICRRLLTKLYKRLGE 827 (831)
T ss_dssp --------B------------------TTEEEEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred --------c------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 3689998554 4455566666666654
No 237
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=56.60 E-value=93 Score=28.50 Aligned_cols=122 Identities=9% Similarity=0.122 Sum_probs=68.5
Q ss_pred CchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE---EEEeC
Q 009523 199 GNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVID 272 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~---v~~vd 272 (532)
..|....+-+.++...+.. .++=+++|+......+...+.++.+|+..+..-. .....+..++..|+. +.++.
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESE-HQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHH-HHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCcCcEEEEE
Confidence 3577777778888887766 6777888875555555444566778877765432 233333445555543 55544
Q ss_pred CCCHHHHHHhhcCCCeeEEEEeCCCCCCCccc-CHHHHHHHHHhCCCEEEEECCC
Q 009523 273 PADMEGLEAALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 273 ~~dle~Le~al~~~~tklV~lesP~NptG~v~-dl~~I~~la~~~gi~lIvDet~ 326 (532)
. |..++...+.+....+|++..+. .... -++++.++.+ .|-++++|++.
T Consensus 116 g-da~~~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~Lk-pGG~lv~dn~~ 165 (221)
T 3dr5_A 116 S-RPLDVMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLR-RGGALVLADAL 165 (221)
T ss_dssp S-CHHHHGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEE-EEEEEEETTTT
T ss_pred c-CHHHHHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcC-CCcEEEEeCCC
Confidence 3 34333333322357899885332 1111 1333333333 36677888874
No 238
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=52.16 E-value=26 Score=30.97 Aligned_cols=66 Identities=11% Similarity=0.001 Sum_probs=44.5
Q ss_pred CcchHHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009523 250 YRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 317 (532)
Q Consensus 250 y~~t~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g 317 (532)
|.--..++...++..|.+|.+...+ .++++.+++.+.++.+|.++.-. +.....++++.+.+++.+
T Consensus 31 HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~--~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 31 HDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILN--GAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp CCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESS--SCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeec--hhhHHHHHHHHHHHHhcC
Confidence 4333455556788899999877643 67888777766578888885544 234455777777777653
No 239
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=48.33 E-value=34 Score=33.27 Aligned_cols=70 Identities=20% Similarity=0.351 Sum_probs=44.6
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHH
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 309 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I 309 (532)
++..+++..+.|+ .+++.+|+++..+... ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 178 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFS-------YLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCH-------HHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 5678888766664 2456778876554211 3556666666667999998655443 233
Q ss_pred HHHHHhCCCEEEE
Q 009523 310 SDLCHKKGAIVCI 322 (532)
Q Consensus 310 ~~la~~~gi~lIv 322 (532)
..++++.|+.+++
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 4567888887764
No 240
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=48.29 E-value=49 Score=31.65 Aligned_cols=89 Identities=12% Similarity=0.011 Sum_probs=50.7
Q ss_pred HHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE-eCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC-----
Q 009523 234 LALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----- 305 (532)
Q Consensus 234 ~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~-vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~d----- 305 (532)
..+...| |-|++++..+.....+. ..++.+|++... +.+ .+.+.++..... ....+++.+....||...+
T Consensus 116 ~~~~~aGadgii~~d~~~e~~~~~~-~~~~~~g~~~i~l~~p~t~~~~i~~i~~~-~~g~v~~~s~~G~tG~~~~~~~~~ 193 (268)
T 1qop_A 116 ARCEQVGVDSVLVADVPVEESAPFR-QAALRHNIAPIFICPPNADDDLLRQVASY-GRGYTYLLSRSGVTGAENRGALPL 193 (268)
T ss_dssp HHHHHHTCCEEEETTCCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHH-CCSCEEEESSSSCCCSSSCC--CC
T ss_pred HHHHHcCCCEEEEcCCCHHHHHHHH-HHHHHcCCcEEEEECCCCCHHHHHHHHhh-CCCcEEEEecCCcCCCccCCCchH
Confidence 3333444 66888776664433333 456777876433 333 455666655543 2335666676667776432
Q ss_pred HHHHHHHHHhCCCEEEEEC
Q 009523 306 VKLVSDLCHKKGAIVCIDG 324 (532)
Q Consensus 306 l~~I~~la~~~gi~lIvDe 324 (532)
.+.|.++.+..++++++|.
T Consensus 194 ~~~i~~lr~~~~~pi~vgg 212 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGF 212 (268)
T ss_dssp HHHHHHHHHTTCCCEEEES
T ss_pred HHHHHHHHhccCCcEEEEC
Confidence 4555555554578888864
No 241
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=48.22 E-value=45 Score=32.20 Aligned_cols=90 Identities=10% Similarity=0.047 Sum_probs=51.1
Q ss_pred HHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE-eCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc----
Q 009523 232 MLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---- 304 (532)
Q Consensus 232 al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~-vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~---- 304 (532)
.+..+.+.| |-|++++..+..... +...++.+|++..+ +.+ .+.+.+++..+. ....||+.+....||...
T Consensus 115 f~~~~~~aGvdgvii~Dlp~ee~~~-~~~~~~~~gl~~i~liaP~t~~eri~~i~~~-~~gfvY~vS~~GvTG~~~~~~~ 192 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIADVPVEESAP-FSKAAKAHGIAPIFIAPPNADADTLKMVSEQ-GEGYTYLLSRAGVTGTESKAGE 192 (267)
T ss_dssp HHHHHHHHTCCEEEETTSCGGGCHH-HHHHHHHTTCEEECEECTTCCHHHHHHHHHH-CCSCEEESCCCCCC--------
T ss_pred HHHHHHHcCCCEEEeCCCCHhhHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHh-CCCcEEEEecCCCCCCccCCcH
Confidence 344444444 778888777655443 33567788887653 333 456777766654 234677766666677653
Q ss_pred CHHHHHHHHHhC-CCEEEEE
Q 009523 305 DVKLVSDLCHKK-GAIVCID 323 (532)
Q Consensus 305 dl~~I~~la~~~-gi~lIvD 323 (532)
++.++.+.++++ +++++++
T Consensus 193 ~~~~~v~~vr~~~~~pv~vG 212 (267)
T 3vnd_A 193 PIENILTQLAEFNAPPPLLG 212 (267)
T ss_dssp CHHHHHHHHHTTTCCCEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 345555555553 6777774
No 242
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=46.06 E-value=29 Score=30.04 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=53.0
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCC---H----HHHHHhhcCCCeeEEEEeCCCCC
Q 009523 227 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD---M----EGLEAALNNNNVSLFFTESPTNP 299 (532)
Q Consensus 227 ~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~d---l----e~Le~al~~~~tklV~lesP~Np 299 (532)
..+.-....+..-|=+|+.+. +|.. .++..|+++..+.... - .++.+.++++++.+|+. +|..-
T Consensus 37 ~~l~~~a~~l~~lGf~i~AT~----GTa~----~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVIn-t~~~~ 107 (143)
T 2yvq_A 37 PRFLGVAEQLHNEGFKLFATE----ATSD----WLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVIN-LPNNN 107 (143)
T ss_dssp HHHHHHHHHHHTTTCEEEEEH----HHHH----HHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEE-CCCCC
T ss_pred HHHHHHHHHHHHCCCEEEECc----hHHH----HHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEE-CCCCC
Confidence 444444555666677776653 3433 3345677777764221 1 34677777767888775 55431
Q ss_pred CCcccCHHHHHHHHHhCCCEEEE
Q 009523 300 FLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 300 tG~v~dl~~I~~la~~~gi~lIv 322 (532)
.....|-..|.+.|-+++++++.
T Consensus 108 ~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 108 TKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEC
T ss_pred CcCCccHHHHHHHHHHhCCCeEc
Confidence 22234666899999999999874
No 243
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=45.13 E-value=25 Score=32.60 Aligned_cols=36 Identities=8% Similarity=-0.077 Sum_probs=32.0
Q ss_pred CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 287 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 287 ~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
++..|++|-..|+.|.....+++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 578899988878999999999999999999988763
No 244
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=44.43 E-value=60 Score=31.66 Aligned_cols=86 Identities=10% Similarity=0.035 Sum_probs=49.9
Q ss_pred HHHhccCCCEEEEc-CCC--CcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHH
Q 009523 233 LLALVPAGGHIVTT-TDC--YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 309 (532)
Q Consensus 233 l~all~~Gd~VIv~-~~~--y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I 309 (532)
+..|++.|.+|++. +.. .......+ ..+...++++...|..|.+.+++++++.++..|+.....+ .+.....|
T Consensus 27 ~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~---n~~~~~~l 102 (346)
T 3i6i_A 27 ATASLDAHRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGE---SILDQIAL 102 (346)
T ss_dssp HHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGG---GGGGHHHH
T ss_pred HHHHHHCCCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchh---hHHHHHHH
Confidence 34555666555443 322 11111112 1234568888888999999999999833356666533321 23334688
Q ss_pred HHHHHhCC-CEEEE
Q 009523 310 SDLCHKKG-AIVCI 322 (532)
Q Consensus 310 ~~la~~~g-i~lIv 322 (532)
.+.|++.| +..++
T Consensus 103 ~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 103 VKAMKAVGTIKRFL 116 (346)
T ss_dssp HHHHHHHCCCSEEE
T ss_pred HHHHHHcCCceEEe
Confidence 88888887 64443
No 245
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=44.17 E-value=61 Score=28.53 Aligned_cols=42 Identities=21% Similarity=0.094 Sum_probs=27.0
Q ss_pred CCcccCHHHHHHHHHhCCCEEE--EECCCCCCCcccccccCCcEEEECCc
Q 009523 300 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHSAT 347 (532)
Q Consensus 300 tG~v~dl~~I~~la~~~gi~lI--vDet~a~~~~~~~l~~gaDivv~S~s 347 (532)
.|...++-++++.+++.|+.+| .|.. ..++...+|+++...+
T Consensus 97 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~~~~ 140 (187)
T 3sho_A 97 WRYLRDTVAALAGAAERGVPTMALTDSS------VSPPARIADHVLVAAT 140 (187)
T ss_dssp SSCCHHHHHHHHHHHHTTCCEEEEESCT------TSHHHHHCSEEEECCC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEeCCC------CCcchhhCcEEEEecC
Confidence 4777778888999999886554 3332 2344444777775433
No 246
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=43.65 E-value=1.4e+02 Score=28.58 Aligned_cols=82 Identities=13% Similarity=0.127 Sum_probs=51.4
Q ss_pred cccC-CcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCC--cccCHHHHHHHHHhCC----CEEEEECCCCCCCcc
Q 009523 261 LPKM-GITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFL--RCVDVKLVSDLCHKKG----AIVCIDGTFATPLNQ 332 (532)
Q Consensus 261 l~~~-Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG--~v~dl~~I~~la~~~g----i~lIvDet~a~~~~~ 332 (532)
++.. |.++.+.-.+ .++++.++..++++.+|.+..-.. ++ .+..+.++.+.+++.| +.+++=....+. .
T Consensus 152 L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d~VglS~l~t-~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~--~ 228 (262)
T 1xrs_B 152 LERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVT-QKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINN--E 228 (262)
T ss_dssp GGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCC-TTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCH--H
T ss_pred HHhcCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEEeecC-CccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCH--H
Confidence 7888 9999876543 577777776655788998844442 22 3445777888777765 778875552211 1
Q ss_pred cccccCCcEEEEC
Q 009523 333 KALSLGADLVLHS 345 (532)
Q Consensus 333 ~~l~~gaDivv~S 345 (532)
.....|+|.+...
T Consensus 229 ~a~~iGad~~~~d 241 (262)
T 1xrs_B 229 IAKELGYDAGFGP 241 (262)
T ss_dssp HHHTTTCSEEECT
T ss_pred HHHHcCCeEEECC
Confidence 1224566666643
No 247
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=42.45 E-value=1.2e+02 Score=26.41 Aligned_cols=40 Identities=8% Similarity=0.061 Sum_probs=25.3
Q ss_pred CCCcccCHHHHHHHHHhCCCEE--EEECCCCCCCcccccccCCcEEEE
Q 009523 299 PFLRCVDVKLVSDLCHKKGAIV--CIDGTFATPLNQKALSLGADLVLH 344 (532)
Q Consensus 299 ptG~v~dl~~I~~la~~~gi~l--IvDet~a~~~~~~~l~~gaDivv~ 344 (532)
..|...++-++++.+++.|+.+ |.|+. ..++..-+|+++.
T Consensus 105 ~sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~la~~ad~~l~ 146 (183)
T 2xhz_A 105 NSGESSEITALIPVLKRLHVPLICITGRP------ESSMARAADVHLC 146 (183)
T ss_dssp SSSCCHHHHHHHHHHHTTTCCEEEEESCT------TSHHHHHSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCC------CChhHHhCCEEEE
Confidence 3477777888899999988644 44332 2344444676664
No 248
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=41.74 E-value=65 Score=32.64 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=43.2
Q ss_pred ccCCCEEEEcCCCCcch------HHHHHHhcccCCcEEEEeCCC-------------CHHHHHHhhcCCCeeEEEEeCCC
Q 009523 237 VPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESPT 297 (532)
Q Consensus 237 l~~Gd~VIv~~~~y~~t------~~~~~~~l~~~Gv~v~~vd~~-------------dle~Le~al~~~~tklV~lesP~ 297 (532)
+++||+|-+..|..+.. .......++.+|.+|+.-+.. -.++|.+++.+.++++|+..--.
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67899888888876532 122223466788888765421 15677788876579999875444
Q ss_pred CCCCcccC
Q 009523 298 NPFLRCVD 305 (532)
Q Consensus 298 NptG~v~d 305 (532)
.-+-++.|
T Consensus 120 yga~rlLp 127 (371)
T 3tla_A 120 DNSNSLLP 127 (371)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHHh
Confidence 33444443
No 249
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=41.38 E-value=61 Score=31.46 Aligned_cols=70 Identities=13% Similarity=0.189 Sum_probs=42.8
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 311 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~ 311 (532)
++..+++..+.|+ .+++.+|++...+... ++.+|.+.+++.++++||.|.-.++- .+..
T Consensus 189 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~-------~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWA-------YFARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTK-------SSEA 254 (291)
T ss_dssp SCCEEEESSCCCH-------HHHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCH-------HHHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH-------HHHH
Confidence 4678888777664 2456678876654321 34555566666678888886555432 2234
Q ss_pred HHHhCCCEEEE
Q 009523 312 LCHKKGAIVCI 322 (532)
Q Consensus 312 la~~~gi~lIv 322 (532)
++++.|+.++.
T Consensus 255 ia~~~g~~v~~ 265 (291)
T 1pq4_A 255 IAAEIGAGVEL 265 (291)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 56777776543
No 250
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=41.27 E-value=44 Score=32.91 Aligned_cols=69 Identities=16% Similarity=0.258 Sum_probs=44.1
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC---------CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHH
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 309 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~---------dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I 309 (532)
++..+++..+.|+ .+++.+|++...+... ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 189 ~~~~~v~~H~af~-------Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFG-------YLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASS-------KVA 254 (312)
T ss_dssp SCCEEEESSCTTH-------HHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCH-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 4677888766653 3456778887654311 3556666677767899988654432 345
Q ss_pred HHHHHhCCCEEE
Q 009523 310 SDLCHKKGAIVC 321 (532)
Q Consensus 310 ~~la~~~gi~lI 321 (532)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 556788887764
No 251
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=41.09 E-value=48 Score=32.88 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=44.9
Q ss_pred hccCCCEEEEcCCCCcc------hHHHHHHhcccCCcEEEEeCCC-------------CHHHHHHhhcCCCeeEEEEeCC
Q 009523 236 LVPAGGHIVTTTDCYRK------TRIFIETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 236 ll~~Gd~VIv~~~~y~~------t~~~~~~~l~~~Gv~v~~vd~~-------------dle~Le~al~~~~tklV~lesP 296 (532)
.+++||+|-+..|..+. ........++.+|.+|+.-+.. -.++|.+++.+.++++|+..--
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 46899999888777542 1222234567789999875521 1567778887667999998544
Q ss_pred CCCCCcccC
Q 009523 297 TNPFLRCVD 305 (532)
Q Consensus 297 ~NptG~v~d 305 (532)
..-+-++.|
T Consensus 88 G~g~~rlL~ 96 (327)
T 4h1h_A 88 GFNSNQLLP 96 (327)
T ss_dssp CSCGGGGGG
T ss_pred chhHHHHhh
Confidence 443444443
No 252
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=40.64 E-value=31 Score=30.20 Aligned_cols=54 Identities=13% Similarity=0.046 Sum_probs=39.5
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH----HHHH-HHHHhCCCE-EEEECCCCC
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV----KLVS-DLCHKKGAI-VCIDGTFAT 328 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~NptG~v~dl----~~I~-~la~~~gi~-lIvDet~a~ 328 (532)
+.+.|.+.++++++..|++.-|-|..|+..+. +.++ .++++.+++ ..+||.+.+
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 67889999988889999999998877776542 3344 344456765 557998765
No 253
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=40.16 E-value=1.6e+02 Score=28.45 Aligned_cols=73 Identities=11% Similarity=0.063 Sum_probs=40.0
Q ss_pred EEEeCCHHHHH-HHHHHHhccCCCEEEEcCCCCcchHHHHHHhccc------CCcEEEEeCCCCHHHHHHhhcCCCeeEE
Q 009523 219 TVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK------MGITATVIDPADMEGLEAALNNNNVSLF 291 (532)
Q Consensus 219 ~i~~sSG~~Ai-~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~------~Gv~v~~vd~~dle~Le~al~~~~tklV 291 (532)
.+++++|+.-+ ..++..|++.|.+|++....-............. .++++...|..|.+.++++++. +..|
T Consensus 27 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~V 104 (351)
T 3ruf_A 27 TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG--VDHV 104 (351)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT--CSEE
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC--CCEE
Confidence 44444443222 2334456677887766543222222222221111 4677877888899999999874 5556
Q ss_pred EE
Q 009523 292 FT 293 (532)
Q Consensus 292 ~l 293 (532)
+-
T Consensus 105 ih 106 (351)
T 3ruf_A 105 LH 106 (351)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 254
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=39.60 E-value=1.3e+02 Score=23.42 Aligned_cols=90 Identities=16% Similarity=0.260 Sum_probs=54.7
Q ss_pred cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCC
Q 009523 218 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP 296 (532)
..++++.|.-+... +..+.+.| .+|++.+..-. -... +...++.....|..+.+.+++.++. ..+|+.+.|
T Consensus 7 ~v~I~G~G~iG~~~-~~~l~~~g~~~v~~~~r~~~----~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~~~ 78 (118)
T 3ic5_A 7 NICVVGAGKIGQMI-AALLKTSSNYSVTVADHDLA----ALAV-LNRMGVATKQVDAKDEAGLAKALGG--FDAVISAAP 78 (118)
T ss_dssp EEEEECCSHHHHHH-HHHHHHCSSEEEEEEESCHH----HHHH-HHTTTCEEEECCTTCHHHHHHHTTT--CSEEEECSC
T ss_pred eEEEECCCHHHHHH-HHHHHhCCCceEEEEeCCHH----HHHH-HHhCCCcEEEecCCCHHHHHHHHcC--CCEEEECCC
Confidence 35566666544332 33455667 56665543221 1211 2345777777888889999988864 677777664
Q ss_pred CCCCCcccCHHHHHHHHHhCCCEEE
Q 009523 297 TNPFLRCVDVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 297 ~NptG~v~dl~~I~~la~~~gi~lI 321 (532)
.. ....+.+.|.+.|+..+
T Consensus 79 ~~------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 79 FF------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp GG------GHHHHHHHHHHTTCEEE
T ss_pred ch------hhHHHHHHHHHhCCCEE
Confidence 32 23677888888887755
No 255
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=39.45 E-value=66 Score=30.82 Aligned_cols=83 Identities=8% Similarity=0.074 Sum_probs=48.3
Q ss_pred HHHhccCCCEEEEc-CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009523 233 LLALVPAGGHIVTT-TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 311 (532)
Q Consensus 233 l~all~~Gd~VIv~-~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~ 311 (532)
+..|++.|.+|++. +..- .....+. .+...|+++...|..|.+.+.++++. ...|+...... .+.-...+.+
T Consensus 28 ~~~L~~~g~~V~~l~R~~~-~~~~~~~-~l~~~~v~~v~~Dl~d~~~l~~a~~~--~d~vi~~a~~~---~~~~~~~l~~ 100 (318)
T 2r6j_A 28 VKGSLKLGHPTYVFTRPNS-SKTTLLD-EFQSLGAIIVKGELDEHEKLVELMKK--VDVVISALAFP---QILDQFKILE 100 (318)
T ss_dssp HHHHHHTTCCEEEEECTTC-SCHHHHH-HHHHTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCGG---GSTTHHHHHH
T ss_pred HHHHHHCCCcEEEEECCCC-chhhHHH-HhhcCCCEEEEecCCCHHHHHHHHcC--CCEEEECCchh---hhHHHHHHHH
Confidence 34555667655443 3221 1122221 12345888888899999999999975 56666533321 1334577888
Q ss_pred HHHhCC-CEEEE
Q 009523 312 LCHKKG-AIVCI 322 (532)
Q Consensus 312 la~~~g-i~lIv 322 (532)
.|++.| +.-++
T Consensus 101 aa~~~g~v~~~v 112 (318)
T 2r6j_A 101 AIKVAGNIKRFL 112 (318)
T ss_dssp HHHHHCCCCEEE
T ss_pred HHHhcCCCCEEE
Confidence 888877 54333
No 256
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=38.60 E-value=1.1e+02 Score=28.94 Aligned_cols=84 Identities=11% Similarity=0.061 Sum_probs=48.3
Q ss_pred HHHhccCCCEEEEc-CCCCc---chHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCC-CCCcccCHH
Q 009523 233 LLALVPAGGHIVTT-TDCYR---KTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN-PFLRCVDVK 307 (532)
Q Consensus 233 l~all~~Gd~VIv~-~~~y~---~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~N-ptG~v~dl~ 307 (532)
+..|++.|.+|++. +..-. .....+. .+...++++...|..|.+.++++++. ...|+...... +...+.-..
T Consensus 21 ~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~ 97 (313)
T 1qyd_A 21 VNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDALKQ--VDVVISALAGGVLSHHILEQL 97 (313)
T ss_dssp HHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHHHTT--CSEEEECCCCSSSSTTTTTHH
T ss_pred HHHHHhCCCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHHHhC--CCEEEECCccccchhhHHHHH
Confidence 34556667666553 32211 1111111 12345788877888899999999975 55666543322 211344467
Q ss_pred HHHHHHHhCC-CE
Q 009523 308 LVSDLCHKKG-AI 319 (532)
Q Consensus 308 ~I~~la~~~g-i~ 319 (532)
.+.+.|++.| +.
T Consensus 98 ~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 98 KLVEAIKEAGNIK 110 (313)
T ss_dssp HHHHHHHHSCCCS
T ss_pred HHHHHHHhcCCCc
Confidence 8888898887 53
No 257
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=38.42 E-value=2.5e+02 Score=27.60 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=54.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEc--CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeE
Q 009523 215 GAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSL 290 (532)
Q Consensus 215 ga~~~i~~sSG~~Ai~~al~all~~Gd--~VIv~--~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tkl 290 (532)
...+.|++-+.+..+..++....+.|. +|++. +|.+.|. .+ ...|...|++++.+.. ..+...++ ++..
T Consensus 120 ~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~-~l-a~~L~~~gI~vtli~D---sa~~~~m~--~vd~ 192 (315)
T 3ecs_A 120 KDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGK-KM-AKALCHLNVPVTVVLD---AAVGYIME--KADL 192 (315)
T ss_dssp CTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHH-HH-HHHHHTTTCCEEEECG---GGHHHHGG--GCSE
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHH-HH-HHHHHHcCCCEEEEeh---hHHHHHHH--hCCE
Confidence 334566664444444444444444553 45554 3444443 23 3456778999988753 23333443 3566
Q ss_pred EEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEEE
Q 009523 291 FFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 291 V~lesP~-NptG~v~d---l~~I~~la~~~gi~lIvD 323 (532)
|++-.=. -..|.+.. --.++-+|+.+|++++|=
T Consensus 193 VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 193 VIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp EEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred EEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 6662211 12244432 246777899999998873
No 258
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=38.13 E-value=56 Score=28.69 Aligned_cols=88 Identities=13% Similarity=0.057 Sum_probs=49.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhccC-CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHh--hcCCCeeEEEE
Q 009523 217 ESTVIMASGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA--LNNNNVSLFFT 293 (532)
Q Consensus 217 ~~~i~~sSG~~Ai~~al~all~~-Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~a--l~~~~tklV~l 293 (532)
...++++.|.-+...+ ..+.+. |-.|++-+..- .... .+...|+.+...|..+.+.++++ +. +..+|++
T Consensus 40 ~~v~IiG~G~~G~~~a-~~L~~~~g~~V~vid~~~----~~~~-~~~~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGMGRIGTGAY-DELRARYGKISLGIEIRE----EAAQ-QHRSEGRNVISGDATDPDFWERILDTG--HVKLVLL 111 (183)
T ss_dssp CSEEEECCSHHHHHHH-HHHHHHHCSCEEEEESCH----HHHH-HHHHTTCCEEECCTTCHHHHHTBCSCC--CCCEEEE
T ss_pred CcEEEECCCHHHHHHH-HHHHhccCCeEEEEECCH----HHHH-HHHHCCCCEEEcCCCCHHHHHhccCCC--CCCEEEE
Confidence 4688888887554443 234444 65555544322 1122 23445887776777788888776 43 3678888
Q ss_pred eCCCCCCCcccCHHHHHHHHHhCC
Q 009523 294 ESPTNPFLRCVDVKLVSDLCHKKG 317 (532)
Q Consensus 294 esP~NptG~v~dl~~I~~la~~~g 317 (532)
.+|+. .....+...+++.+
T Consensus 112 ~~~~~-----~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPHH-----QGNQTALEQLQRRN 130 (183)
T ss_dssp CCSSH-----HHHHHHHHHHHHTT
T ss_pred eCCCh-----HHHHHHHHHHHHHC
Confidence 66641 12234555666644
No 259
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=38.13 E-value=59 Score=32.34 Aligned_cols=69 Identities=16% Similarity=0.099 Sum_probs=45.0
Q ss_pred hccCCCEEEEcCCCCcch---HHHH---HHhcccCCcEEEEeCCC----------C---HHHHHHhhcCCCeeEEEEeCC
Q 009523 236 LVPAGGHIVTTTDCYRKT---RIFI---ETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 236 ll~~Gd~VIv~~~~y~~t---~~~~---~~~l~~~Gv~v~~vd~~----------d---le~Le~al~~~~tklV~lesP 296 (532)
.+++||+|-+..|..+.. ...+ ...++.+|.+|+.-+.. | .++|.+++.+.++++|+..--
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 378999998888876643 2222 23567789999876521 1 567777877657999987544
Q ss_pred CCCCCccc
Q 009523 297 TNPFLRCV 304 (532)
Q Consensus 297 ~NptG~v~ 304 (532)
..-+-++.
T Consensus 88 G~g~~rlL 95 (331)
T 4e5s_A 88 GYNSNGLL 95 (331)
T ss_dssp CSCGGGGG
T ss_pred cccHHHHH
Confidence 43344443
No 260
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=38.06 E-value=2.2e+02 Score=25.42 Aligned_cols=123 Identities=12% Similarity=0.087 Sum_probs=59.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~dle 277 (532)
++....+-..++.+.+...++-+++|+......+...+.++.+|+..+..-. .....+..++..|+ .+.++..+-.+
T Consensus 54 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 54 TCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQ-PPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSH-HHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 4455555566666666667777777764444444333444667777665432 22333333433443 34444332223
Q ss_pred HHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC
Q 009523 278 GLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 278 ~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~ 326 (532)
.+.....+ ....+|++..+. .....-++.+.++.+. |..+++|++.
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~--~~~~~~l~~~~~~L~p-gG~lv~~~~~ 181 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADK--ENCSAYYERCLQLLRP-GGILAVLRVL 181 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCS--TTHHHHHHHHHHHEEE-EEEEEEECCS
T ss_pred HHHHHHhcCCCCCccEEEECCCH--HHHHHHHHHHHHHcCC-CeEEEEECCC
Confidence 33332221 257888884431 0001113444444433 5566777764
No 261
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=37.58 E-value=93 Score=29.55 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=45.3
Q ss_pred hcccCCcEEEEe--CCCCHHHHHHhhcCCCeeEEEEeCCCCC--CCc-ccC--H---HHHHHHHHh--CCCEEEEECCCC
Q 009523 260 VLPKMGITATVI--DPADMEGLEAALNNNNVSLFFTESPTNP--FLR-CVD--V---KLVSDLCHK--KGAIVCIDGTFA 327 (532)
Q Consensus 260 ~l~~~Gv~v~~v--d~~dle~Le~al~~~~tklV~lesP~Np--tG~-v~d--l---~~I~~la~~--~gi~lIvDet~a 327 (532)
..+..|+++-.. +.+.++.++..+.. +..|++.+.+ | .|. ..+ + +++.+++.+ +++.+.||.-..
T Consensus 129 ~ir~~G~k~Gvalnp~Tp~e~l~~~l~~--vD~VlvMsV~-PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~ 205 (246)
T 3inp_A 129 LIKSFGIQAGLALNPATGIDCLKYVESN--IDRVLIMSVN-PGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN 205 (246)
T ss_dssp HHHTTTSEEEEEECTTCCSGGGTTTGGG--CSEEEEECSC-TTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC
T ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHhc--CCEEEEeeec-CCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC
Confidence 346667654432 34566777766653 6677776654 3 232 112 4 445555544 458899997644
Q ss_pred CCCcccccccCCcEEE
Q 009523 328 TPLNQKALSLGADLVL 343 (532)
Q Consensus 328 ~~~~~~~l~~gaDivv 343 (532)
..-.....+.|+|+++
T Consensus 206 ~~ti~~~~~aGAD~~V 221 (246)
T 3inp_A 206 PYNIAEIAVCGVNAFV 221 (246)
T ss_dssp TTTHHHHHTTTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 3222344567999877
No 262
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=37.45 E-value=66 Score=29.32 Aligned_cols=71 Identities=13% Similarity=0.121 Sum_probs=48.7
Q ss_pred hHHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC----CEEEEECC
Q 009523 253 TRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----AIVCIDGT 325 (532)
Q Consensus 253 t~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g----i~lIvDet 325 (532)
-..++...++..|.++.+...+ .++++.+++.+.++.+|.+..-. +.....++++.+.+++.+ +.+++=..
T Consensus 104 G~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 104 GKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALL--TTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCS--GGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 3455556788899999987654 57788777765568888885433 234556778887777754 77777544
No 263
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=37.44 E-value=2.2e+02 Score=25.30 Aligned_cols=123 Identities=11% Similarity=0.162 Sum_probs=61.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE--EEEeCCCCH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADM 276 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~--v~~vd~~dl 276 (532)
..+....+-..++.......++=+++|+......+...+.++.+|+..+..-. .....+..++..|+. +.++.. |.
T Consensus 48 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~ 125 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEK-STALAKEYWEKAGLSDKIGLRLS-PA 125 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEES-CH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHH-HHHHHHHHHHHCCCCCceEEEeC-CH
Confidence 34555666666777766677777777774444444444444667776665432 233333334444432 444333 34
Q ss_pred -HHHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC
Q 009523 277 -EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 277 -e~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~ 326 (532)
+.+.....+ ....+|++..+. .....-++.+.++.+ .|-.+++|++.
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~~--~~~~~~l~~~~~~L~-pgG~lv~~~~~ 176 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDADK--ANTDLYYEESLKLLR-EGGLIAVDNVL 176 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSCG--GGHHHHHHHHHHHEE-EEEEEEEECSS
T ss_pred HHHHHHhhhccCCCCccEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEeCCC
Confidence 333332211 257888874431 000011333333333 35677778774
No 264
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=36.60 E-value=79 Score=30.49 Aligned_cols=88 Identities=14% Similarity=0.060 Sum_probs=47.8
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE-eCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCccc----C
Q 009523 233 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 305 (532)
Q Consensus 233 l~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~-vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~----d 305 (532)
+..+...| |-+++++..+..... +...++.+|+...+ +.+ .+.+.+++..+. ....||+.+-...||.-. +
T Consensus 118 ~~~~~~aGvdGvIipDlp~ee~~~-~~~~~~~~gl~~I~lvap~t~~eri~~i~~~-~~gfiY~vs~~GvTG~~~~~~~~ 195 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADVPTNESQP-FVAAAEKFGIQPIFIAPPTASDETLRAVAQL-GKGYTYLLSRAGVTGAETKANMP 195 (271)
T ss_dssp HHHHHHHTCCEEEETTSCGGGCHH-HHHHHHHTTCEEEEEECTTCCHHHHHHHHHH-CCSCEEECCCC--------CCHH
T ss_pred HHHHHHCCCCEEEECCCCHHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHH-CCCeEEEEeccCCCCcccCCchh
Confidence 33344444 788888877755433 33567788887654 333 345666665544 345677755555677653 2
Q ss_pred HHHHHHHHHhC-CCEEEE
Q 009523 306 VKLVSDLCHKK-GAIVCI 322 (532)
Q Consensus 306 l~~I~~la~~~-gi~lIv 322 (532)
+.++.+.++++ ++++++
T Consensus 196 ~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 196 VHALLERLQQFDAPPALL 213 (271)
T ss_dssp HHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHhcCCCEEE
Confidence 44555555554 677777
No 265
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=36.20 E-value=22 Score=34.53 Aligned_cols=71 Identities=25% Similarity=0.316 Sum_probs=42.6
Q ss_pred CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC------C---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009523 241 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 311 (532)
Q Consensus 241 d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~------~---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~ 311 (532)
..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.|+ --.+.|.+
T Consensus 164 ~~~vt~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~ 232 (282)
T 3mfq_A 164 RYLVTPHDAFN-------YFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQE 232 (282)
T ss_dssp CEEECSSSCCH-------HHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHH
T ss_pred cEEEEECchHH-------HHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHH
Confidence 44555445553 245667877654321 1 3455555666557999998654432 12567888
Q ss_pred HHHhCCCEEEE
Q 009523 312 LCHKKGAIVCI 322 (532)
Q Consensus 312 la~~~gi~lIv 322 (532)
+|++.|+.+++
T Consensus 233 ~a~~~g~~v~~ 243 (282)
T 3mfq_A 233 AVKAKGGQVEV 243 (282)
T ss_dssp HHHTTSCCCEE
T ss_pred HHHhcCCceEE
Confidence 89998876554
No 266
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=36.16 E-value=2.6e+02 Score=25.70 Aligned_cols=122 Identities=13% Similarity=0.099 Sum_probs=61.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE--EEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~--v~~vd~~dle 277 (532)
.+....+-..++.+.+...++=+++|+......+...+.++.+|+..+..- ......+..++..|+. +.++.. |..
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~-~~~~~a~~~~~~~g~~~~v~~~~~-d~~ 125 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADA-HHAQVARENLQLAGVDQRVTLREG-PAL 125 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCH-HHHHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 466666667777777777777777777544444444444466777665432 2233333334444432 444332 344
Q ss_pred HHHHhhcC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC
Q 009523 278 GLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 278 ~Le~al~~-~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~ 326 (532)
+....+.. ....+|++..+. .....-++++.++.+ .|.++++|++.
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~~~~~ 172 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDADK--PNNPHYLRWALRYSR-PGTLIIGDNVV 172 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSCG--GGHHHHHHHHHHTCC-TTCEEEEECCS
T ss_pred HHHHhcCCCCCeEEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEeCCC
Confidence 33222221 246788874321 000011333333333 35577778774
No 267
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=36.01 E-value=1.6e+02 Score=30.41 Aligned_cols=93 Identities=17% Similarity=0.216 Sum_probs=49.3
Q ss_pred HHhccCCCEE-EEcCCCCc-chHHHHHHhcccCCcEEEEeC-CCCHHH-----HHHhhcCCCeeEEEEeCCCCCCC---c
Q 009523 234 LALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMGITATVID-PADMEG-----LEAALNNNNVSLFFTESPTNPFL---R 302 (532)
Q Consensus 234 ~all~~Gd~V-Iv~~~~y~-~t~~~~~~~l~~~Gv~v~~vd-~~dle~-----Le~al~~~~tklV~lesP~NptG---~ 302 (532)
..+.+.|.+| ++..+.|. +....+.......|+++...+ ..|+.+ ++.+-.. +..+|++++|.--.- .
T Consensus 122 ~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~gvpv~~~~~~~dp~~i~~~al~~a~~~-~~DvVIIDTaGrl~~d~~l 200 (443)
T 3dm5_A 122 RYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSK-GVDIIIVDTAGRHKEDKAL 200 (443)
T ss_dssp HHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGTCEEECCTTCCCHHHHHHHHHHHHHHT-TCSEEEEECCCCSSCCHHH
T ss_pred HHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHHHHHhC-CCCEEEEECCCcccchHHH
Confidence 3444566544 44444453 344445455566788765433 235433 3333333 478999998852111 1
Q ss_pred ccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 303 CVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 303 v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
...+..+.+..+...+++|+|.+.+
T Consensus 201 m~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 201 IEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp HHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred HHHHHHHHHhhcCceEEEEEeCCCc
Confidence 1123344444444678999998853
No 268
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=35.83 E-value=70 Score=31.84 Aligned_cols=69 Identities=16% Similarity=-0.007 Sum_probs=44.2
Q ss_pred hccCCCEEEEcCCCCcch------HHHHHHhcccCCcEEEEeCCC----------C---HHHHHHhhcCCCeeEEEEeCC
Q 009523 236 LVPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 236 ll~~Gd~VIv~~~~y~~t------~~~~~~~l~~~Gv~v~~vd~~----------d---le~Le~al~~~~tklV~lesP 296 (532)
.+++||+|-+-.|..+.. .......++.+|.+|+.-+.. | .++|.+++.+.++++|+..--
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368999998888887542 222223567789998875421 1 567777777657999987544
Q ss_pred CCCCCccc
Q 009523 297 TNPFLRCV 304 (532)
Q Consensus 297 ~NptG~v~ 304 (532)
..-+-++.
T Consensus 89 G~g~~rlL 96 (336)
T 3sr3_A 89 GMNSNSLL 96 (336)
T ss_dssp CSCGGGGG
T ss_pred cccHHHHh
Confidence 43344444
No 269
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=35.68 E-value=2.6e+02 Score=25.54 Aligned_cols=123 Identities=17% Similarity=0.154 Sum_probs=61.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~dle 277 (532)
.+....+-+.++...+...++=+++|+......+...+.++.+|+..+..- ......+..++..|+ .+.++..+-.+
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~-~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDR-EAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCH-HHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 455555666667777777777777766433333333445566777766432 223333334444454 24444333223
Q ss_pred HHHHhhc----CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC
Q 009523 278 GLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 278 ~Le~al~----~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~ 326 (532)
.+..... .....+|++.... .....-++.+.++.+ .|.++++|++.
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~--~~~~~~l~~~~~~L~-pGG~lv~d~~~ 183 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADK--PNYIKYHERLMKLVK-VGGIVAYDNTL 183 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCG--GGHHHHHHHHHHHEE-EEEEEEEECTT
T ss_pred HHHHHHhccCCCCCcCEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEecCC
Confidence 3333321 2257888885321 111111333333333 35677788874
No 270
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=35.44 E-value=1.2e+02 Score=28.91 Aligned_cols=67 Identities=9% Similarity=0.034 Sum_probs=43.8
Q ss_pred CCcEEEEeCCC--CHHHHHHhh----cCCCeeEEEEe----CCCCCCCcccCHHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 264 MGITATVIDPA--DMEGLEAAL----NNNNVSLFFTE----SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 264 ~Gv~v~~vd~~--dle~Le~al----~~~~tklV~le----sP~NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
.|..|..-... +++++..++ ...+..+++++ +..|..-...++..+..+.+.++.++|+|..++.+.
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 56666554433 566666555 22245677776 333445555678888888777799999999987654
No 271
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=34.59 E-value=30 Score=29.84 Aligned_cols=58 Identities=12% Similarity=0.152 Sum_probs=37.7
Q ss_pred CCcEEEEeCCCC---HHHHHHhhcCCCeeEEEEeCCC--CCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 264 MGITATVIDPAD---MEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 264 ~Gv~v~~vd~~d---le~Le~al~~~~tklV~lesP~--NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
.|+++..+.... -.++.+.|.++++.+|+. +|. ++.....|...|.+.|-.|+++++.
T Consensus 48 ~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 48 TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIF-FRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEE-ECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred hCceEEEEEecCCCCcchHHHHHHCCCccEEEE-ccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 355555553211 125677777767887765 444 4333256889999999999999874
No 272
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=34.45 E-value=1.3e+02 Score=24.90 Aligned_cols=73 Identities=19% Similarity=0.242 Sum_probs=44.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCC
Q 009523 217 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 217 ~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP 296 (532)
...++++.|.-+... ...+.+.|-.|++-+..- ...+ .+...|+.+...|..|.+.++++--. +..+|++..+
T Consensus 7 ~~v~I~G~G~iG~~l-a~~L~~~g~~V~~id~~~----~~~~-~~~~~~~~~~~gd~~~~~~l~~~~~~-~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGL-VRELTAAGKKVLAVDKSK----EKIE-LLEDEGFDAVIADPTDESFYRSLDLE-GVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHTTCCEEEEESCH----HHHH-HHHHTTCEEEECCTTCHHHHHHSCCT-TCSEEEECCS
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCeEEEEECCH----HHHH-HHHHCCCcEEECCCCCHHHHHhCCcc-cCCEEEEecC
Confidence 467888888744332 334555676666554422 1122 23345777777788888888876333 4678887665
No 273
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=34.00 E-value=78 Score=31.07 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=42.4
Q ss_pred CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC------C---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHH
Q 009523 240 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 310 (532)
Q Consensus 240 Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~------~---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~ 310 (532)
+..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 190 ~~~~v~~H~af~-------Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~ 255 (307)
T 3ujp_A 190 QRFLVSCEGAFS-------YLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 255 (307)
T ss_dssp GCEEEEEESTTH-------HHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHH-------HHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHH
Confidence 456776655553 345677888664421 1 3556666677768999999765554 3455
Q ss_pred HHHHhCCCEE
Q 009523 311 DLCHKKGAIV 320 (532)
Q Consensus 311 ~la~~~gi~l 320 (532)
.++++.|+.+
T Consensus 256 ~ia~e~g~~v 265 (307)
T 3ujp_A 256 QVAQATGARF 265 (307)
T ss_dssp HTTTTTCCEE
T ss_pred HHHHHhCCce
Confidence 6677778765
No 274
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=32.71 E-value=53 Score=28.93 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=37.6
Q ss_pred CCcEEEEeCCCC---HHHHHHhhcCCCeeEEEEeCCC--CCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 264 MGITATVIDPAD---MEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 264 ~Gv~v~~vd~~d---le~Le~al~~~~tklV~lesP~--NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
.|+++..+.... -.++.+.|.++++.+|+. +|. ++.....|...|.+.|-.|+++++.
T Consensus 56 ~Gl~v~~v~k~~eGG~p~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 56 TGMNVNAMLSGPMGGDQQVGALISEGKIDVLIF-FWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp HCCCCEEECCGGGTHHHHHHHHHHTTCCCEEEE-ECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred hCceeEEEEecCCCCCchHHHHHHCCCccEEEE-cCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 466665554211 125777777767887775 444 3222245788999999999999885
No 275
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=32.48 E-value=1.6e+02 Score=27.21 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=58.7
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~dle 277 (532)
.+....+-..++...+...++=+++|+......+...+.++.+|+..+..-... ...+..++..|+ .+.++.. |..
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~g-da~ 122 (242)
T 3r3h_A 45 APEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWT-KHAHPYWREAKQEHKIKLRLG-PAL 122 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSC-CCSHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 455566666677777777766565555333333444455566777665432211 111122233333 2443333 333
Q ss_pred H-HHHhhc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 278 G-LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 278 ~-Le~al~---~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
+ +..... .....+|++..+. .....-++++.++.+ .|-++++|++..
T Consensus 123 ~~l~~~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~d~~~~ 173 (242)
T 3r3h_A 123 DTLHSLLNEGGEHQFDFIFIDADK--TNYLNYYELALKLVT-PKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHHCSSCEEEEEEESCG--GGHHHHHHHHHHHEE-EEEEEEEECSSS
T ss_pred HHHHHHhhccCCCCEeEEEEcCCh--HHhHHHHHHHHHhcC-CCeEEEEECCcc
Confidence 3 333221 1257899986541 011111334444443 366777788743
No 276
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=32.34 E-value=3e+02 Score=25.34 Aligned_cols=123 Identities=15% Similarity=0.140 Sum_probs=62.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~dle 277 (532)
.|....+-..+....+...++=+++|+......+...+.++.+|+..+..-. .....+..++..|+ .+.++..+-.+
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~-~~~~a~~~~~~~g~~~~i~~~~gda~~ 142 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKE-NYELGLPVIKKAGVDHKIDFREGPALP 142 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCH-HHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 4555566666677777777777777774444444444455667776665432 23333333444454 34444332223
Q ss_pred HHHHhhc----CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCC
Q 009523 278 GLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 278 ~Le~al~----~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~ 326 (532)
.+..... .....+|++.... .....-++.+.++.+. |-++++|++.
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~ 192 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDADK--DNYLNYHKRLIDLVKV-GGVIGYDNTL 192 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSCS--TTHHHHHHHHHHHBCT-TCCEEEECTT
T ss_pred HHHHHHhccCCCCCEEEEEEcCch--HHHHHHHHHHHHhCCC-CeEEEEecCC
Confidence 3333220 2246788885431 1111113444444444 5566778774
No 277
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=32.06 E-value=1e+02 Score=32.95 Aligned_cols=117 Identities=17% Similarity=0.137 Sum_probs=67.2
Q ss_pred HHhccCCCEEEEcCCCCcchHHHH---HHhcccC-CcEEEEeCCCCHHHHHHhhcCCCeeEEEEe-CCC------CCCCc
Q 009523 234 LALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT------NPFLR 302 (532)
Q Consensus 234 ~all~~Gd~VIv~~~~y~~t~~~~---~~~l~~~-Gv~v~~vd~~dle~Le~al~~~~tklV~le-sP~------NptG~ 302 (532)
.+|++.|--+|+-+..|+.....+ +..-+.+ .+.+.--+..+.+..+.+++. ....|-+- .|. -.+|.
T Consensus 287 ~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~a-GAD~vkVGiGpGSiCtTr~v~Gv 365 (556)
T 4af0_A 287 KLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAA-GADGLRIGMGSGSICITQEVMAV 365 (556)
T ss_dssp HHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-TCSEEEECSSCSTTBCCTTTCCS
T ss_pred HHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHc-CCCEEeecCCCCcccccccccCC
Confidence 456677855666666665543322 2222222 455554455577777777765 35555541 121 12343
Q ss_pred ccC----HHHHHHHHHhCCCEEEEECCCCC-CCcccccccCCcEEEECCccccCCC
Q 009523 303 CVD----VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGH 353 (532)
Q Consensus 303 v~d----l~~I~~la~~~gi~lIvDet~a~-~~~~~~l~~gaDivv~S~sK~lgg~ 353 (532)
-.| +.++++.++++|+++|.|.=.-. +-..+.+..|+|.|+ +.-+|+|.
T Consensus 366 G~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VM--lGsllAGt 419 (556)
T 4af0_A 366 GRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVM--MGGLLAGT 419 (556)
T ss_dssp CCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEE--ESTTTTTB
T ss_pred CCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEE--Echhhccc
Confidence 334 45667778899999999976322 223567788999887 34455544
No 278
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=31.94 E-value=2.3e+02 Score=27.15 Aligned_cols=109 Identities=13% Similarity=0.094 Sum_probs=57.0
Q ss_pred HHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHhccCC--CEEEEc--CCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHH
Q 009523 206 VEEKMSALEGAESTVIM-ASGMSASTVMLLALVPAG--GHIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 280 (532)
Q Consensus 206 Le~~lA~l~ga~~~i~~-sSG~~Ai~~al~all~~G--d~VIv~--~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le 280 (532)
+.+.-+++....+.|++ .++..+.. ++..+.+.| -+|++. +|.+.+ ....+ .|...|++++.+.. ..+-
T Consensus 99 Ia~~a~~~I~~g~~IlT~~~s~Tv~~-~l~~a~~~~~~~~V~v~etrP~~qG-~~~a~-~L~~~gI~vtli~d---sa~~ 172 (276)
T 1vb5_A 99 LASIGAQLIDDGDVIITHSFSSTVLE-IIRTAKERKKRFKVILTESSPDYEG-LHLAR-ELEFSGIEFEVITD---AQMG 172 (276)
T ss_dssp HHHHHHHHCCTTEEEECCSCCHHHHH-HHHHHHHTTCCEEEEEECCTTTTHH-HHHHH-HHHHTTCCEEEECG---GGHH
T ss_pred HHHHHHHHccCCCEEEEeCCChHHHH-HHHHHHHcCCeEEEEEeCCCcchhh-HHHHH-HHHHCCCCEEEEcH---HHHH
Confidence 33444445544456663 33333333 344443433 357763 455555 33333 34457999988762 2223
Q ss_pred HhhcCCCeeEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEE
Q 009523 281 AALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 281 ~al~~~~tklV~lesP~-NptG~v~d---l~~I~~la~~~gi~lIv 322 (532)
..+. ++..|++-.=. ...|.+.. -..++.+|++++++++|
T Consensus 173 ~~m~--~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 173 LFCR--EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp HHHT--TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred HHHc--cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 3343 46777772211 22343332 35788889999998877
No 279
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=31.28 E-value=3e+02 Score=24.93 Aligned_cols=121 Identities=14% Similarity=0.208 Sum_probs=61.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCCCH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADM 276 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~dl 276 (532)
..|....+-..++...+...++=+++|+......+...+.++.+|+..+..-. .....+..++..|+ .+.++..+-.
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPN-ATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 45666666666777777777777777764444444434444667776664322 22223233333343 2444433222
Q ss_pred HHHHHhhcC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHh---CCCEEEEECCC
Q 009523 277 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 326 (532)
Q Consensus 277 e~Le~al~~---~~tklV~lesP~NptG~v~dl~~I~~la~~---~gi~lIvDet~ 326 (532)
+.+.....+ ....+|++..+ ..+...+.+.+.+ .|..+++|++.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHHhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 333333221 25788887543 1233333333332 36677778774
No 280
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=30.45 E-value=99 Score=30.47 Aligned_cols=68 Identities=18% Similarity=0.265 Sum_probs=43.1
Q ss_pred CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC------C---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHH
Q 009523 240 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 310 (532)
Q Consensus 240 Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~------~---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~ 310 (532)
+..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 204 ~r~~v~~H~af~-------Yfa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~ 269 (321)
T 1xvl_A 204 QRFLVSCEGAFS-------YLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 269 (321)
T ss_dssp GCEEEEEESTTH-------HHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCCh-------HHHH
Confidence 457887666653 345677887665421 1 3556666677767899998765543 2334
Q ss_pred HHHHhCCCEEE
Q 009523 311 DLCHKKGAIVC 321 (532)
Q Consensus 311 ~la~~~gi~lI 321 (532)
.++++.|+.++
T Consensus 270 ~iA~e~g~~v~ 280 (321)
T 1xvl_A 270 QVAQATGARFG 280 (321)
T ss_dssp HHHTTTCCEEE
T ss_pred HHHHhcCCcee
Confidence 56788888775
No 281
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=30.37 E-value=54 Score=29.68 Aligned_cols=44 Identities=18% Similarity=0.192 Sum_probs=32.1
Q ss_pred HHHHhhcCCCeeEEEEeCCC--CCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 278 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 278 ~Le~al~~~~tklV~lesP~--NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
++...|.++++.+|+. +|. ++.....|...|.+.|-.++++++.
T Consensus 89 qI~d~I~~geIdlVIn-t~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIF-FWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp HHHHHHHTTSCCEEEE-ECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred hHHHHHHCCCccEEEE-ccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 5667777767887775 444 4333256899999999999999874
No 282
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=30.02 E-value=1.9e+02 Score=28.29 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=45.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCC-EEEEcCCC---CcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEE
Q 009523 217 ESTVIMASGMSASTVMLLALVPAGG-HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 292 (532)
Q Consensus 217 ~~~i~~sSG~~Ai~~al~all~~Gd-~VIv~~~~---y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~ 292 (532)
..++++..|..+ ..++..+.+.|- +|.+.+.. ......+...+....+.++..++..+.+++.+.+.+ ..+|+
T Consensus 155 k~~lVlGaGG~g-~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~--aDiII 231 (315)
T 3tnl_A 155 KKMTICGAGGAA-TAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE--SVIFT 231 (315)
T ss_dssp SEEEEECCSHHH-HHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT--CSEEE
T ss_pred CEEEEECCChHH-HHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC--CCEEE
Confidence 457777766422 333445556674 66665444 333222222333345666666676777788877765 56788
Q ss_pred EeCCCC
Q 009523 293 TESPTN 298 (532)
Q Consensus 293 lesP~N 298 (532)
-++|..
T Consensus 232 NaTp~G 237 (315)
T 3tnl_A 232 NATGVG 237 (315)
T ss_dssp ECSSTT
T ss_pred ECccCC
Confidence 777753
No 283
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=29.92 E-value=66 Score=30.29 Aligned_cols=125 Identities=12% Similarity=0.071 Sum_probs=61.8
Q ss_pred CCCchhHHHHHHHHHhhh---C---CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcc-cCCcEEE
Q 009523 197 RYGNPTTVVVEEKMSALE---G---AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITAT 269 (532)
Q Consensus 197 R~~~p~~~~Le~~lA~l~---g---a~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~-~~Gv~v~ 269 (532)
|.-||....|...|-.-+ + ++.++-+.+|+......+.-.+.+..+|+.-+..-..... +...++ ..++...
T Consensus 53 r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~-l~~~a~~~~ni~~V 131 (233)
T 4df3_A 53 REWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRD-LLTVVRDRRNIFPI 131 (233)
T ss_dssp EECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHH-HHHHSTTCTTEEEE
T ss_pred eeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHH-HHHhhHhhcCeeEE
Confidence 334576666655443311 1 2446666666644445555566777788877655433322 223333 3356666
Q ss_pred EeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC
Q 009523 270 VIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 270 ~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet 325 (532)
..+..+++...... . ...+||...+. |--...-+.++....+.-|.++|++..
T Consensus 132 ~~d~~~p~~~~~~~-~-~vDvVf~d~~~-~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 132 LGDARFPEKYRHLV-E-GVDGLYADVAQ-PEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp ESCTTCGGGGTTTC-C-CEEEEEECCCC-TTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeccCcccccccc-c-eEEEEEEeccC-ChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 55655655543222 2 46777764443 210000122333334444666665543
No 284
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.27 E-value=2.6e+02 Score=23.53 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=52.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcc-cCCcEEEEeCCCCHHHHHHh-hcCCCeeEEE
Q 009523 215 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAA-LNNNNVSLFF 292 (532)
Q Consensus 215 ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~-~~Gv~v~~vd~~dle~Le~a-l~~~~tklV~ 292 (532)
.....++++.|.-+...+ ..+.+.|-.|++.+..-.. + ..+. ..|..+...+..+.+.++++ +. +..+|+
T Consensus 18 ~~~~v~IiG~G~iG~~la-~~L~~~g~~V~vid~~~~~----~-~~~~~~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi 89 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIA-NLASSSGHSVVVVDKNEYA----F-HRLNSEFSGFTVVGDAAEFETLKECGME--KADMVF 89 (155)
T ss_dssp CCCEEEEECCSHHHHHHH-HHHHHTTCEEEEEESCGGG----G-GGSCTTCCSEEEESCTTSHHHHHTTTGG--GCSEEE
T ss_pred CCCcEEEECCCHHHHHHH-HHHHhCCCeEEEEECCHHH----H-HHHHhcCCCcEEEecCCCHHHHHHcCcc--cCCEEE
Confidence 345678888887554433 3344556666655433211 1 2233 55776655566677777665 43 367888
Q ss_pred EeCCCCCCCcccCHHHHHHHHHh-CC-CEEEEE
Q 009523 293 TESPTNPFLRCVDVKLVSDLCHK-KG-AIVCID 323 (532)
Q Consensus 293 lesP~NptG~v~dl~~I~~la~~-~g-i~lIvD 323 (532)
+++++. .....+.+++++ .+ ..++..
T Consensus 90 ~~~~~~-----~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 90 AFTNDD-----STNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp ECSSCH-----HHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEeCCc-----HHHHHHHHHHHHHCCCCeEEEE
Confidence 866651 123455666665 44 344443
No 285
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=29.15 E-value=1.4e+02 Score=27.60 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=31.9
Q ss_pred CCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCC
Q 009523 264 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 318 (532)
Q Consensus 264 ~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi 318 (532)
.++++...|..|.+.++++++. ...|+.....++...+.-...+.+.|++.++
T Consensus 44 ~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 44 QGITVRQADYGDEAALTSALQG--VEKLLLISSSEVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp TTCEEEECCTTCHHHHHHHTTT--CSEEEECC--------CHHHHHHHHHHHHTC
T ss_pred CCCeEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCchHHHHHHHHHHHHHHHcCC
Confidence 4677777888899999999865 5566553332222222234677778877664
No 286
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=29.00 E-value=1.9e+02 Score=26.68 Aligned_cols=104 Identities=11% Similarity=0.102 Sum_probs=65.2
Q ss_pred hHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHh-c-cCCCEEEE--c-CCC-CcchHHHHHHhc-ccCCcEEEEe
Q 009523 202 TTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL-V-PAGGHIVT--T-TDC-YRKTRIFIETVL-PKMGITATVI 271 (532)
Q Consensus 202 ~~~~Le~~lA~l~ga~---~~i~~sSG~~Ai~~al~al-l-~~Gd~VIv--~-~~~-y~~t~~~~~~~l-~~~Gv~v~~v 271 (532)
.++.|.+.+.+.+|.+ .+++++.|..+-.+ +..+ . ..|=+++. . +|. -.+ . ...|++|..
T Consensus 67 ~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aL-a~~~~~~~~g~~iVg~~D~dp~~kiG--------~~~i~GvpV~~- 136 (212)
T 3keo_A 67 DVKKLMNFFAEILNDHSTTNVMLVGCGNIGRAL-LHYRFHDRNKMQISMAFDLDSNDLVG--------KTTEDGIPVYG- 136 (212)
T ss_dssp EHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHH-TTCCCCTTSSEEEEEEEECTTSTTTT--------CBCTTCCBEEE-
T ss_pred EHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHH-HHhhhcccCCeEEEEEEeCCchhccC--------ceeECCeEEeC-
Confidence 5889999999998853 47888888755332 2221 1 22323322 1 221 111 1 124666542
Q ss_pred CCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECC
Q 009523 272 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 325 (532)
Q Consensus 272 d~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet 325 (532)
.+++++.++++++..++++.|+. ..+++++.+.+.|+.-|..=+
T Consensus 137 ----~~dL~~~v~~~~Id~vIIAvPs~------~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 137 ----ISTINDHLIDSDIETAILTVPST------EAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp ----GGGHHHHC-CCSCCEEEECSCGG------GHHHHHHHHHHHTCCEEEECS
T ss_pred ----HHHHHHHHHHcCCCEEEEecCch------hHHHHHHHHHHcCCCEEEEcC
Confidence 56788888776789999988874 357899999999988777533
No 287
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=28.64 E-value=2.1e+02 Score=28.39 Aligned_cols=104 Identities=9% Similarity=0.081 Sum_probs=55.6
Q ss_pred hhCCCcEEEeCCHHHHHHHHHHHhccCC--CEEEEcC--CCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCe
Q 009523 213 LEGAESTVIMASGMSASTVMLLALVPAG--GHIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 288 (532)
Q Consensus 213 l~ga~~~i~~sSG~~Ai~~al~all~~G--d~VIv~~--~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~t 288 (532)
+......|++-+.+.....++....+.| -+|++.+ |.+.| .. ....|...|++++.+... .+...+ . ++
T Consensus 138 ~I~~g~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qG-rl-tA~eL~~~GI~vtlI~Ds---a~~~~M-~-~V 210 (338)
T 3a11_A 138 RIEDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQG-KI-TAKELASYGIPVIYVVDS---AARHYM-K-MT 210 (338)
T ss_dssp TCCTTCEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHH-HH-HHHHHHHTTCCEEEECGG---GTTTTG-G-GC
T ss_pred HhCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhh-HH-HHHHHHhCCCCEEEEehH---HHHHHH-H-hC
Confidence 3333456666433322233444444444 3566653 55555 33 323466779999887522 222233 3 46
Q ss_pred eEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEEE
Q 009523 289 SLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 323 (532)
Q Consensus 289 klV~lesP~-NptG~v~d---l~~I~~la~~~gi~lIvD 323 (532)
..|++-.=. -..|.+.. --.++-+|+.+|++++|=
T Consensus 211 d~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~ 249 (338)
T 3a11_A 211 DKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIA 249 (338)
T ss_dssp SEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCEEEEE
T ss_pred CEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEe
Confidence 777772210 12244432 346788899999999884
No 288
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=28.61 E-value=1.9e+02 Score=27.56 Aligned_cols=89 Identities=3% Similarity=-0.007 Sum_probs=52.5
Q ss_pred HHHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE-eCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccC---
Q 009523 232 MLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD--- 305 (532)
Q Consensus 232 al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~-vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~d--- 305 (532)
.+..+...| |-+|+++..+..... +...++.+|++..+ +.+ .+.+.+++..+. ....||+.+-...||.-.+
T Consensus 108 F~~~~~~aGvdG~IipDLP~eE~~~-~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~-a~gFiY~Vs~~GvTG~~~~~~~ 185 (252)
T 3tha_A 108 FVKKAKSLGICALIVPELSFEESDD-LIKECERYNIALITLVSVTTPKERVKKLVKH-AKGFIYLLASIGITGTKSVEEA 185 (252)
T ss_dssp HHHHHHHTTEEEEECTTCCGGGCHH-HHHHHHHTTCEECEEEETTSCHHHHHHHHTT-CCSCEEEECCSCSSSCSHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHH-HHHHHHHcCCeEEEEeCCCCcHHHHHHHHHh-CCCeEEEEecCCCCCcccCCCH
Confidence 334444455 778888876655433 44567778887665 333 346666665544 3467777665567887644
Q ss_pred -HHHHHHHHHhC-CCEEEE
Q 009523 306 -VKLVSDLCHKK-GAIVCI 322 (532)
Q Consensus 306 -l~~I~~la~~~-gi~lIv 322 (532)
+.++.+..+++ ++++++
T Consensus 186 ~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 186 ILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHHHHHhcCCcEEE
Confidence 34444445554 667776
No 289
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=28.59 E-value=67 Score=25.88 Aligned_cols=53 Identities=19% Similarity=0.220 Sum_probs=36.0
Q ss_pred CHHHHHHhhcCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEE-EEECCCC
Q 009523 275 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIV-CIDGTFA 327 (532)
Q Consensus 275 dle~Le~al~~~~tklV~lesP~NptG~v~d----l~~I~~la~~~gi~l-IvDet~a 327 (532)
+.+.|++.++++++..|++--|-|..|...+ .++.++..++.++++ .+||-+.
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4677888887767889999999888887765 334444333337654 5788654
No 290
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=28.52 E-value=3.1e+02 Score=24.27 Aligned_cols=124 Identities=15% Similarity=0.205 Sum_probs=61.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCc--EEEEeCCCCHH
Q 009523 200 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 277 (532)
Q Consensus 200 ~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv--~v~~vd~~dle 277 (532)
.+....+-..++.......++=+++|+......+...+.++.+|+..+..-. .....+..+...|+ .+.++..+-.+
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEK-HADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 4666666677777777777777777775444444444444667777664332 22333333444443 24443332223
Q ss_pred HHHHhhcC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEECCCC
Q 009523 278 GLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 327 (532)
Q Consensus 278 ~Le~al~~--~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIvDet~a 327 (532)
.+...... ....+|++..+.. ....-++.+.++.+ .|.++++|++..
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~--~~~~~l~~~~~~L~-pgG~lv~~~~~~ 170 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQ--NNPAYFEWALKLSR-PGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGG--GHHHHHHHHHHTCC-TTCEEEEESCSG
T ss_pred HHHHHHhcCCCCcCEEEEcCCcH--HHHHHHHHHHHhcC-CCcEEEEeCCCc
Confidence 23332211 1467888744310 00011233333333 356888888743
No 291
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=28.29 E-value=94 Score=29.40 Aligned_cols=51 Identities=14% Similarity=0.081 Sum_probs=34.5
Q ss_pred ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009523 262 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 317 (532)
Q Consensus 262 ~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g 317 (532)
...|+++...|..|.+.++++++. ...|+...... .+.....+.+.|++.|
T Consensus 54 ~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 54 KASGANIVHGSIDDHASLVEAVKN--VDVVISTVGSL---QIESQVNIIKAIKEVG 104 (308)
T ss_dssp HTTTCEEECCCTTCHHHHHHHHHT--CSEEEECCCGG---GSGGGHHHHHHHHHHC
T ss_pred HhCCCEEEEeccCCHHHHHHHHcC--CCEEEECCcch---hhhhHHHHHHHHHhcC
Confidence 345888887888899999999975 55666533321 1233467788888776
No 292
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=27.96 E-value=1.5e+02 Score=27.74 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=36.1
Q ss_pred ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC-CCC-CcccCHHHHHHHHHhCCC
Q 009523 262 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPF-LRCVDVKLVSDLCHKKGA 318 (532)
Q Consensus 262 ~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~-Npt-G~v~dl~~I~~la~~~gi 318 (532)
...++++...|..|.+.++++++. +..|+..... ++. ..+.....+.+.|++.|+
T Consensus 42 ~~~~v~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 42 WRGKVSVRQLDYFNQESMVEAFKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp GBTTBEEEECCTTCHHHHHHHTTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred hhCCCEEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 345888888899999999999975 5666654332 111 112234578888888775
No 293
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=27.71 E-value=68 Score=31.19 Aligned_cols=67 Identities=19% Similarity=0.320 Sum_probs=41.7
Q ss_pred CEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC------C---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009523 241 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 311 (532)
Q Consensus 241 d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~------~---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~ 311 (532)
..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||+|.-.++ +.+..
T Consensus 184 ~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 249 (294)
T 3hh8_A 184 KLIVTSEGCFK-------YFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDR-------RPMET 249 (294)
T ss_dssp CCEEEEESCCH-------HHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCS-------HHHHH
T ss_pred cEEEEECChHH-------HHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHHHH
Confidence 56777666664 234566776654421 1 3556666666667899999765543 34456
Q ss_pred HHHhCCCEEE
Q 009523 312 LCHKKGAIVC 321 (532)
Q Consensus 312 la~~~gi~lI 321 (532)
++++.|+.++
T Consensus 250 ia~~~g~~v~ 259 (294)
T 3hh8_A 250 VSKDSGIPIY 259 (294)
T ss_dssp HHHHHCCCEE
T ss_pred HHHHhCCcEE
Confidence 6788887765
No 294
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=27.64 E-value=86 Score=29.27 Aligned_cols=35 Identities=9% Similarity=-0.026 Sum_probs=29.8
Q ss_pred CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 287 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 287 ~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
.+..|++|-. |..|.....+++.++|++||+.+|.
T Consensus 167 ~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 4678888766 6789999999999999999998873
No 295
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=27.53 E-value=53 Score=31.72 Aligned_cols=69 Identities=17% Similarity=0.279 Sum_probs=40.4
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC---------CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHH
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 309 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~---------~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I 309 (532)
++..+++..+.|+ .+++.+|++...+.. .++.+|.+.++++++++||.|.-.++ +.+
T Consensus 176 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 241 (284)
T 3cx3_A 176 TQKTFVTQHTAFS-------YLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASS-------KVA 241 (284)
T ss_dssp SCCCEEEEESCCH-------HHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCC-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHH
Confidence 4667888766664 245667776654321 13555666666657888888654432 233
Q ss_pred HHHHHhCCCEEE
Q 009523 310 SDLCHKKGAIVC 321 (532)
Q Consensus 310 ~~la~~~gi~lI 321 (532)
..++++.|+.++
T Consensus 242 ~~ia~~~g~~v~ 253 (284)
T 3cx3_A 242 ETLVKSTGVGLK 253 (284)
T ss_dssp HHHHSSSSCCEE
T ss_pred HHHHHHcCCeEE
Confidence 445677776554
No 296
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=27.46 E-value=1.1e+02 Score=29.13 Aligned_cols=56 Identities=14% Similarity=0.164 Sum_probs=37.6
Q ss_pred ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC-CEEEE
Q 009523 262 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCI 322 (532)
Q Consensus 262 ~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g-i~lIv 322 (532)
...++++...|..|.+.++++++. ...|+...... .+.-...+.+.|++.| +.-++
T Consensus 54 ~~~~v~~v~~D~~d~~~l~~a~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 54 RSMGVTIIEGEMEEHEKMVSVLKQ--VDIVISALPFP---MISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp HHTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCGG---GSGGGHHHHHHHHHHCCCCEEE
T ss_pred hcCCcEEEEecCCCHHHHHHHHcC--CCEEEECCCcc---chhhHHHHHHHHHHhCCccEEe
Confidence 345788888899999999999975 56666533221 1333567888888877 64333
No 297
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=27.41 E-value=2.8e+02 Score=24.21 Aligned_cols=37 Identities=11% Similarity=-0.010 Sum_probs=24.7
Q ss_pred HHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEE
Q 009523 280 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 280 e~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lI 321 (532)
...+++ +.-+|++ + ..|...++-++++.|++.|+.+|
T Consensus 104 ~~~~~~-~DvvI~i-S---~SG~t~~~i~~~~~ak~~g~~vI 140 (196)
T 2yva_A 104 RALGHA-GDVLLAI-S---TRGNSRDIVKAVEAAVTRDMTIV 140 (196)
T ss_dssp HHHCCT-TCEEEEE-C---SSSCCHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCC-CCEEEEE-e---CCCCCHHHHHHHHHHHHCCCEEE
Confidence 344555 3344444 3 34777788889999999997665
No 298
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=26.96 E-value=2.4e+02 Score=26.01 Aligned_cols=92 Identities=16% Similarity=0.144 Sum_probs=48.2
Q ss_pred EEeCCHHHHH-HHHHHHhccC--CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCC
Q 009523 220 VIMASGMSAS-TVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 296 (532)
Q Consensus 220 i~~sSG~~Ai-~~al~all~~--Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP 296 (532)
+++++|+.-+ ..++..|++. |.+|++....-..... +...++++...|..|.+.++++++. +..|+....
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-----l~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~ 75 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-----LADQGVEVRHGDYNQPESLQKAFAG--VSKLLFISG 75 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-----HHHTTCEEEECCTTCHHHHHHHTTT--CSEEEECCC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-----HhhcCCeEEEeccCCHHHHHHHHhc--CCEEEEcCC
Confidence 4444444222 2334456665 7666554322111111 1224677777888899999999875 556665433
Q ss_pred CCCCC--cccCHHHHHHHHHhCCC
Q 009523 297 TNPFL--RCVDVKLVSDLCHKKGA 318 (532)
Q Consensus 297 ~NptG--~v~dl~~I~~la~~~gi 318 (532)
.++.. .+.-...+.+.|++.++
T Consensus 76 ~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 76 PHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCchHHHHHHHHHHHHHHHcCC
Confidence 22211 11123467777777765
No 299
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=26.45 E-value=2.7e+02 Score=24.18 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=24.8
Q ss_pred CCcccCHHHHHHHHHhCCCEEE--EECCCCCCCcccccccCCcEEEE
Q 009523 300 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLH 344 (532)
Q Consensus 300 tG~v~dl~~I~~la~~~gi~lI--vDet~a~~~~~~~l~~gaDivv~ 344 (532)
.|...++-++++.+++.|+.+| .|. ...++..-+|+++.
T Consensus 89 sG~t~~~~~~~~~ak~~g~~vi~IT~~------~~s~l~~~ad~~l~ 129 (186)
T 1m3s_A 89 SGETKSLIHTAAKAKSLHGIVAALTIN------PESSIGKQADLIIR 129 (186)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEESC------TTSHHHHHCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEECC------CCCchHHhCCEEEE
Confidence 4666777788899999987655 332 22344444677664
No 300
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=26.44 E-value=33 Score=35.24 Aligned_cols=85 Identities=11% Similarity=0.125 Sum_probs=49.4
Q ss_pred cCCCEEEEcCCCCcc--hHHHHHHhcccCCcEEEEeCCCCH-----HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHH
Q 009523 238 PAGGHIVTTTDCYRK--TRIFIETVLPKMGITATVIDPADM-----EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 310 (532)
Q Consensus 238 ~~Gd~VIv~~~~y~~--t~~~~~~~l~~~Gv~v~~vd~~dl-----e~Le~al~~~~tklV~lesP~NptG~v~dl~~I~ 310 (532)
.+|..+|+.--.+.= ...-+...++.+|+..+.+.+..- ......-....+.= | .++...|+..++++++
T Consensus 7 ~~g~~~i~~~f~W~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~d-y--~i~~~~Gt~~df~~lv 83 (496)
T 4gqr_A 7 QQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVS-Y--KLCTRSGNEDEFRNMV 83 (496)
T ss_dssp CTTCCEEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC-S--CSCBTTBCHHHHHHHH
T ss_pred CCCCcEEEEecCCCHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccC-c--eeCCCCCCHHHHHHHH
Confidence 356667776555421 111122347778888877754310 00000000011111 1 3455688889999999
Q ss_pred HHHHhCCCEEEEECC
Q 009523 311 DLCHKKGAIVCIDGT 325 (532)
Q Consensus 311 ~la~~~gi~lIvDet 325 (532)
+-||++|+.||+|-+
T Consensus 84 ~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 84 TRCNNVGVRIYVDAV 98 (496)
T ss_dssp HHHHHTTCEEEEEEC
T ss_pred HHHHHCCCEEEEEEc
Confidence 999999999999998
No 301
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=26.36 E-value=2.5e+02 Score=22.51 Aligned_cols=89 Identities=16% Similarity=0.090 Sum_probs=47.7
Q ss_pred cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC
Q 009523 218 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 297 (532)
Q Consensus 218 ~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~ 297 (532)
..++++.|.-+... ...+.+.|..|++-+..- ..........|+.+...+..+.+.+++..-+ +..+|+++.|.
T Consensus 6 ~i~IiG~G~iG~~~-a~~L~~~g~~v~~~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~d~vi~~~~~ 79 (140)
T 1lss_A 6 YIIIAGIGRVGYTL-AKSLSEKGHDIVLIDIDK----DICKKASAEIDALVINGDCTKIKTLEDAGIE-DADMYIAVTGK 79 (140)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCEEEEEESCH----HHHHHHHHHCSSEEEESCTTSHHHHHHTTTT-TCSEEEECCSC
T ss_pred EEEEECCCHHHHHH-HHHHHhCCCeEEEEECCH----HHHHHHHHhcCcEEEEcCCCCHHHHHHcCcc-cCCEEEEeeCC
Confidence 46677777654433 334556676666654321 1222222334776655566677777655223 46788887665
Q ss_pred CCCCcccCHHHHHHHHHhCC
Q 009523 298 NPFLRCVDVKLVSDLCHKKG 317 (532)
Q Consensus 298 NptG~v~dl~~I~~la~~~g 317 (532)
.. .-..+.+++++.+
T Consensus 80 ~~-----~~~~~~~~~~~~~ 94 (140)
T 1lss_A 80 EE-----VNLMSSLLAKSYG 94 (140)
T ss_dssp HH-----HHHHHHHHHHHTT
T ss_pred ch-----HHHHHHHHHHHcC
Confidence 21 1124555666654
No 302
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=25.81 E-value=61 Score=27.59 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=46.2
Q ss_pred CCcchHHHHHHhcccCCcEEEEeCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC---CCEEEEEC
Q 009523 249 CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDG 324 (532)
Q Consensus 249 ~y~~t~~~~~~~l~~~Gv~v~~vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~---gi~lIvDe 324 (532)
.|.--..++...++..|.++.+.-. ..++++.+++.++++.+|.++.-.. .....++++.+..++. ++.+++=.
T Consensus 15 ~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 15 CHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYG--QGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSS--THHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCc--CcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 3433345566678889999987643 3577777776655788888865552 2233355666666554 46666644
Q ss_pred C
Q 009523 325 T 325 (532)
Q Consensus 325 t 325 (532)
.
T Consensus 93 ~ 93 (137)
T 1ccw_A 93 N 93 (137)
T ss_dssp S
T ss_pred C
Confidence 3
No 303
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=25.65 E-value=2.6e+02 Score=27.94 Aligned_cols=23 Identities=17% Similarity=0.278 Sum_probs=10.3
Q ss_pred EeCCHHHHHHHHHH-HhccCCCEE
Q 009523 221 IMASGMSASTVMLL-ALVPAGGHI 243 (532)
Q Consensus 221 ~~sSG~~Ai~~al~-all~~Gd~V 243 (532)
.+++|...+..++. .-+.+|+.+
T Consensus 54 ~i~TG~~~LD~~Lg~GGl~~G~li 77 (366)
T 1xp8_A 54 VVSTGSLSLDLALGVGGIPRGRIT 77 (366)
T ss_dssp EECCSCHHHHHHTSSSSEETTSEE
T ss_pred eecCCCHHHHHHhCCCCccCCcEE
Confidence 34455555555443 223444433
No 304
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=25.61 E-value=99 Score=28.62 Aligned_cols=36 Identities=6% Similarity=-0.082 Sum_probs=30.5
Q ss_pred CeeEEEEeCC-CCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 287 NVSLFFTESP-TNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 287 ~tklV~lesP-~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
.+..|++|-. -|..|.....+++.++|++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4678888873 46789999999999999999998873
No 305
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=25.55 E-value=86 Score=28.68 Aligned_cols=82 Identities=16% Similarity=0.206 Sum_probs=52.3
Q ss_pred CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE--ECCCCCCCcccccccCCcEEEECCccccC
Q 009523 274 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKFIG 351 (532)
Q Consensus 274 ~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv--Det~a~~~~~~~l~~gaDivv~S~sK~lg 351 (532)
.|.++|+++++. +...||+ -+|.+..++++.+.++++|-.+++ |-.. ++..+ +.+.+++ .+..+
T Consensus 17 r~~~~l~~al~s-~~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~--Gls~d--~~ai~fL----~~~~~ 82 (192)
T 3kts_A 17 HNQKDMEKILEL-DLTYMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVN--GLKND--DYAIDFL----CTEIC 82 (192)
T ss_dssp SSSHHHHHHTTS-SCCEEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEE--TCCCS--HHHHHHH----HHTTC
T ss_pred cCHHHHHHHHcC-CCCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchh--ccCCc--HHHHHHH----HhCCC
Confidence 478999999986 5788887 247889999999999999865554 3332 22111 1222222 23344
Q ss_pred CCCCcEEEEEEeChHHHHHHHHH
Q 009523 352 GHNDVLAGSISGSGKLVTQIRNL 374 (532)
Q Consensus 352 g~gd~~gG~lv~~~~li~~l~~~ 374 (532)
+ -|++..+...+...++.
T Consensus 83 p-----dGIIsTk~~~i~~Ak~~ 100 (192)
T 3kts_A 83 P-----DGIISTRGNAIMKAKQH 100 (192)
T ss_dssp C-----SEEEESCHHHHHHHHHT
T ss_pred C-----CEEEeCcHHHHHHHHHC
Confidence 2 36777777777776653
No 306
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=25.08 E-value=78 Score=30.08 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=51.3
Q ss_pred CCEEEEcCC---CCcchHHHHHHhcccCCcEEEEeCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh
Q 009523 240 GGHIVTTTD---CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 315 (532)
Q Consensus 240 Gd~VIv~~~---~y~~t~~~~~~~l~~~Gv~v~~vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~ 315 (532)
+.+|++..+ .|.--..++...++..|.++.+... ..++++.+++.+.++.+|.+..-. +.....++++.+..++
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~--~~~~~~~~~~i~~l~~ 200 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALM--TTTMYAFKEVNDMLLE 200 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCC--TTTTTHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeec--cCCHHHHHHHHHHHHh
Confidence 345555432 3333344555678889999987643 356777666655468888885543 2334567788887777
Q ss_pred CC--CEEEEEC
Q 009523 316 KG--AIVCIDG 324 (532)
Q Consensus 316 ~g--i~lIvDe 324 (532)
.+ +.+++=.
T Consensus 201 ~~~~~~v~vGG 211 (258)
T 2i2x_B 201 NGIKIPFACGG 211 (258)
T ss_dssp TTCCCCEEEES
T ss_pred cCCCCcEEEEC
Confidence 54 6666644
No 307
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=25.05 E-value=1.6e+02 Score=27.57 Aligned_cols=51 Identities=18% Similarity=0.161 Sum_probs=35.4
Q ss_pred ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009523 262 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 317 (532)
Q Consensus 262 ~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~g 317 (532)
...|+++...|..|.+.++++++. ...|+...... .+.....+.+.|++.|
T Consensus 53 ~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 53 QSLGVILLEGDINDHETLVKAIKQ--VDIVICAAGRL---LIEDQVKIIKAIKEAG 103 (307)
T ss_dssp HHTTCEEEECCTTCHHHHHHHHTT--CSEEEECSSSS---CGGGHHHHHHHHHHHC
T ss_pred HhCCCEEEEeCCCCHHHHHHHHhC--CCEEEECCccc---ccccHHHHHHHHHhcC
Confidence 345788888898999999999975 56666533321 1344567888888776
No 308
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.80 E-value=99 Score=26.12 Aligned_cols=48 Identities=25% Similarity=0.196 Sum_probs=32.9
Q ss_pred EEEeCCCCHHHHHHhhc-CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 268 ATVIDPADMEGLEAALN-NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 268 v~~vd~~dle~Le~al~-~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
+..++.+..+.+..++. . ++.+|+++ |...+-+++.++|+++|++++.
T Consensus 55 l~I~~G~r~~~~l~a~~~~-~~~~iIlt------~g~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 55 ALVTGGDRSDLLLTALEMP-NVRCLILT------GNLEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp EEEEETTCHHHHHHHTTCT-TEEEEEEE------TTCCCCHHHHHHHHHHTCCEEE
T ss_pred EEEEcCCHHHHHHHHHhCC-CCcEEEEc------CCCCCCHHHHHHHHHCCCeEEE
Confidence 44444555566666776 5 58888873 3344567888999999998875
No 309
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=24.69 E-value=3.9e+02 Score=26.59 Aligned_cols=81 Identities=22% Similarity=0.195 Sum_probs=46.3
Q ss_pred ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEe-CCCCC------CCc-ccC---HHHHHHHHHhCCCEEEEECCCCCCC
Q 009523 262 PKMGITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP------FLR-CVD---VKLVSDLCHKKGAIVCIDGTFATPL 330 (532)
Q Consensus 262 ~~~Gv~v~~vd~~dle~Le~al~~~~tklV~le-sP~Np------tG~-v~d---l~~I~~la~~~gi~lIvDet~a~~~ 330 (532)
+.+++.+..-...+.+..+.+++. ....|.+- .|... +|. ... +.++.+.+++.++++|.|.=..++-
T Consensus 142 ~~~~~~Vivg~v~t~e~A~~l~~a-GaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~ 220 (361)
T 3khj_A 142 SKMNIDVIVGNVVTEEATKELIEN-GADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSG 220 (361)
T ss_dssp HHCCCEEEEEEECSHHHHHHHHHT-TCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHH
T ss_pred HhcCCcEEEccCCCHHHHHHHHHc-CcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHH
Confidence 344666654345678888877766 47777772 12211 111 122 3455555677899999986433221
Q ss_pred -cccccccCCcEEE
Q 009523 331 -NQKALSLGADLVL 343 (532)
Q Consensus 331 -~~~~l~~gaDivv 343 (532)
....+..|+|.|.
T Consensus 221 di~kala~GAd~V~ 234 (361)
T 3khj_A 221 DIGKALAVGASSVM 234 (361)
T ss_dssp HHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 1345667898776
No 310
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=24.65 E-value=2.4e+02 Score=25.11 Aligned_cols=100 Identities=11% Similarity=0.066 Sum_probs=50.2
Q ss_pred CEEEEcCCCCcchHHHHHHhcccCCcEEEE--eCCCCH-HHHHHhhcCCCeeEEEEeCCCCCCCcc---cCHHHHHHHHH
Q 009523 241 GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCH 314 (532)
Q Consensus 241 d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~--vd~~dl-e~Le~al~~~~tklV~lesP~NptG~v---~dl~~I~~la~ 314 (532)
|.|++...........+...++.+|.++.. ....++ +.++.+.+. ....|++. |. .+|.. ..++.+.++.+
T Consensus 79 d~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~-g~d~i~v~-~g-~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 79 DYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEA-GADMLAVH-TG-TDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp SEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHH-TCCEEEEE-CC-HHHHHTTCCSHHHHHHHHH
T ss_pred CEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHc-CCCEEEEc-CC-CcccccCCCCHHHHHHHHH
Confidence 677765543212222232345556776653 223343 445655554 35667763 32 12221 25677777776
Q ss_pred hC-CCEEEEECCCCCCCcccccccCCcEEE
Q 009523 315 KK-GAIVCIDGTFATPLNQKALSLGADLVL 343 (532)
Q Consensus 315 ~~-gi~lIvDet~a~~~~~~~l~~gaDivv 343 (532)
.. +++++++.=....-.......|+|.++
T Consensus 156 ~~~~~~i~~~gGI~~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 156 VRRKARIAVAGGISSQTVKDYALLGPDVVI 185 (211)
T ss_dssp HCSSCEEEEESSCCTTTHHHHHTTCCSEEE
T ss_pred HcCCCcEEEECCCCHHHHHHHHHcCCCEEE
Confidence 64 789988754321111123345676554
No 311
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=24.62 E-value=4.2e+02 Score=25.73 Aligned_cols=82 Identities=17% Similarity=0.097 Sum_probs=51.3
Q ss_pred hcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEeCCC--CCCCcccCHHHHHHHHHhCCCEEEEECCCCCCCc-ccccc
Q 009523 260 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALS 336 (532)
Q Consensus 260 ~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~lesP~--NptG~v~dl~~I~~la~~~gi~lIvDet~a~~~~-~~~l~ 336 (532)
.++..|+.+.. ...+.+..+.+.+. ....|+++.+. ..+|...+++.+.++.+..+++++.+.=..++-. ...+.
T Consensus 119 ~l~~~g~~v~~-~v~s~~~a~~a~~~-GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~ 196 (326)
T 3bo9_A 119 ELKENGTKVIP-VVASDSLARMVERA-GADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFA 196 (326)
T ss_dssp HHHHTTCEEEE-EESSHHHHHHHHHT-TCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHH
T ss_pred HHHHcCCcEEE-EcCCHHHHHHHHHc-CCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHH
Confidence 34455766543 34567777766655 47788887654 2235556788888888878999999865443211 23345
Q ss_pred cCCcEEE
Q 009523 337 LGADLVL 343 (532)
Q Consensus 337 ~gaDivv 343 (532)
.|+|.+.
T Consensus 197 ~GA~gV~ 203 (326)
T 3bo9_A 197 LGAEAVQ 203 (326)
T ss_dssp HTCSEEE
T ss_pred hCCCEEE
Confidence 6777655
No 312
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=24.14 E-value=3.2e+02 Score=23.89 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=22.8
Q ss_pred HhhcCCCeeEEEEeCCCCCCCccc-------C----HHHHHHHHHhCCCEEE
Q 009523 281 AALNNNNVSLFFTESPTNPFLRCV-------D----VKLVSDLCHKKGAIVC 321 (532)
Q Consensus 281 ~al~~~~tklV~lesP~NptG~v~-------d----l~~I~~la~~~gi~lI 321 (532)
+.+.+ ++++|++..|+...-... . +..|.++++++|+.++
T Consensus 100 ~l~~~-~~~lliiD~~~~~l~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~vi 150 (220)
T 2cvh_A 100 KTVDS-NFALVVVDSITAHYRAEENRSGLIAELSRQLQVLLWIARKHNIPVI 150 (220)
T ss_dssp HHCCT-TEEEEEEECCCCCTTGGGGSSTTHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHhhc-CCCEEEEcCcHHHhhhcCchHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 34433 589999999885421111 1 2336677777775433
No 313
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=24.11 E-value=1.8e+02 Score=28.00 Aligned_cols=96 Identities=16% Similarity=0.094 Sum_probs=54.8
Q ss_pred EEEEcCCCCcchHHHHHHhcccCCcEEEEeCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEE
Q 009523 242 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 320 (532)
Q Consensus 242 ~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~l 320 (532)
+|++....|.+....+....+..++.+..-|. .|+.++.++..- ....|.+-... ..-..++++.+.|++.|..+
T Consensus 97 sVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~-GAD~VlLi~a~---L~~~~l~~l~~~a~~lGl~~ 172 (272)
T 3tsm_A 97 SVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSW-GADCILIIMAS---VDDDLAKELEDTAFALGMDA 172 (272)
T ss_dssp EEECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHT-TCSEEEEETTT---SCHHHHHHHHHHHHHTTCEE
T ss_pred EEeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHc-CCCEEEEcccc---cCHHHHHHHHHHHHHcCCeE
Confidence 45555555556666555544445666654443 366677776654 45666663322 22234778888899999988
Q ss_pred EEECCCCCCCcccccccCCcEE
Q 009523 321 CIDGTFATPLNQKALSLGADLV 342 (532)
Q Consensus 321 IvDet~a~~~~~~~l~~gaDiv 342 (532)
++|-.-..- ....+..|+|++
T Consensus 173 lvevh~~eE-l~~A~~~ga~iI 193 (272)
T 3tsm_A 173 LIEVHDEAE-MERALKLSSRLL 193 (272)
T ss_dssp EEEECSHHH-HHHHTTSCCSEE
T ss_pred EEEeCCHHH-HHHHHhcCCCEE
Confidence 887531111 123345566654
No 314
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=24.07 E-value=84 Score=29.56 Aligned_cols=35 Identities=9% Similarity=-0.147 Sum_probs=30.0
Q ss_pred CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 287 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 287 ~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
++..|++|-. |..|.....+++.++|++||+.++.
T Consensus 178 ~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4678888777 5779999999999999999988874
No 315
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=23.94 E-value=17 Score=22.56 Aligned_cols=15 Identities=40% Similarity=0.855 Sum_probs=12.4
Q ss_pred cccccccccCCCCcccccCCCCC
Q 009523 7 SSQKILSFSSSCSSFECRSDPDF 29 (532)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (532)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~CK~DsDC 16 (29)
T 1lu0_A 2 VCPRIL--------LECKKDSDC 16 (29)
T ss_dssp CCCSCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 316
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=23.89 E-value=4.7e+02 Score=25.94 Aligned_cols=87 Identities=5% Similarity=0.058 Sum_probs=43.7
Q ss_pred HHHHhhhCCCcEEEeCCHHHHH-HHHHHHhccCC-CEEEEcCCCCcchHHHHHHhccc-----CCcEEEEeCCCCHHHHH
Q 009523 208 EKMSALEGAESTVIMASGMSAS-TVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPK-----MGITATVIDPADMEGLE 280 (532)
Q Consensus 208 ~~lA~l~ga~~~i~~sSG~~Ai-~~al~all~~G-d~VIv~~~~y~~t~~~~~~~l~~-----~Gv~v~~vd~~dle~Le 280 (532)
+.+...+....++++ +|+..+ ..++..|++.| .+|++.+..-.........+... .++.+...|..|.+.++
T Consensus 27 ~~~~~~~~~k~vLVT-GatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~ 105 (399)
T 3nzo_A 27 KELQSVVSQSRFLVL-GGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDA 105 (399)
T ss_dssp HHHHHHHHTCEEEEE-TTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHH
T ss_pred HHHHHHhCCCEEEEE-cCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHH
Confidence 344444434444454 433222 23345566778 57776654332222222221111 34555555777888887
Q ss_pred HhhcCCCeeEEEEeC
Q 009523 281 AALNNNNVSLFFTES 295 (532)
Q Consensus 281 ~al~~~~tklV~les 295 (532)
.++...++..|+-..
T Consensus 106 ~~~~~~~~D~Vih~A 120 (399)
T 3nzo_A 106 FIKADGQYDYVLNLS 120 (399)
T ss_dssp HHHHCCCCSEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 776544577777543
No 317
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=23.68 E-value=1.8e+02 Score=28.53 Aligned_cols=75 Identities=11% Similarity=0.075 Sum_probs=45.8
Q ss_pred hccCCCEEEEcCCCCcchHHHH---HHhcccCCcEEEEeCCC----------C---HHHHHHhhcCCCeeEEEEeCCCCC
Q 009523 236 LVPAGGHIVTTTDCYRKTRIFI---ETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESPTNP 299 (532)
Q Consensus 236 ll~~Gd~VIv~~~~y~~t~~~~---~~~l~~~Gv~v~~vd~~----------d---le~Le~al~~~~tklV~lesP~Np 299 (532)
.+++||+|-+-.|..+.....+ ...++.+|.+|+.-+.. | .++|.+++.+.++++|+..--..-
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg 92 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYG 92 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSC
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcC
Confidence 3678999888777665432222 23466789988865421 2 567777777657899988544433
Q ss_pred CCccc---CHHHHH
Q 009523 300 FLRCV---DVKLVS 310 (532)
Q Consensus 300 tG~v~---dl~~I~ 310 (532)
+-++. |.+.|.
T Consensus 93 a~rlLp~LD~~~i~ 106 (311)
T 1zl0_A 93 CGQLLPGLDWGRLQ 106 (311)
T ss_dssp GGGGTTTCCHHHHH
T ss_pred HHHHhhccchhhhh
Confidence 33444 445443
No 318
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=23.29 E-value=2.6e+02 Score=24.03 Aligned_cols=39 Identities=15% Similarity=-0.002 Sum_probs=24.1
Q ss_pred CCcccCHHHHHHHHHhCCCEEE--EECCCCCCCcccccccCCcEEEEC
Q 009523 300 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHS 345 (532)
Q Consensus 300 tG~v~dl~~I~~la~~~gi~lI--vDet~a~~~~~~~l~~gaDivv~S 345 (532)
.|...++-+.++.|++.|+.+| .|+. .. +...+|+++..
T Consensus 92 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s-l~~~ad~~l~~ 132 (180)
T 1jeo_A 92 SGRTESVLTVAKKAKNINNNIIAIVCEC------GN-VVEFADLTIPL 132 (180)
T ss_dssp SSCCHHHHHHHHHHHTTCSCEEEEESSC------CG-GGGGCSEEEEC
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEEeCCC------Ch-HHHhCCEEEEe
Confidence 3666777788899999886544 3332 12 33346776643
No 319
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=22.83 E-value=2.4e+02 Score=25.26 Aligned_cols=124 Identities=14% Similarity=0.201 Sum_probs=62.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcE--EEEeCCCCH
Q 009523 199 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADM 276 (532)
Q Consensus 199 ~~p~~~~Le~~lA~l~ga~~~i~~sSG~~Ai~~al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~--v~~vd~~dl 276 (532)
-.|....+-..+....+...++=+.+|+......+...+.++.+|+..+..-. .....+..++..|+. +.++.. |.
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~ 119 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPD-CAAITQQMLNFAGLQDKVTILNG-AS 119 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEES-CH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChH-HHHHHHHHHHHcCCCCceEEEEC-CH
Confidence 44555566666666666677777777765444444444556777777665432 233333333444432 444433 33
Q ss_pred HHHHHhhcC----CCeeEEEEeCCCCCCCcccCHHHHHHHHH--hCCCEEEEECCCC
Q 009523 277 EGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFA 327 (532)
Q Consensus 277 e~Le~al~~----~~tklV~lesP~NptG~v~dl~~I~~la~--~~gi~lIvDet~a 327 (532)
.++...+.. ....+|++.... ....+..++.+.++ +.|..+++|++..
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~~~~~~~~~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWK---DRYLPDTLLLEKCGLLRKGTVLLADNVIV 173 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCG---GGHHHHHHHHHHTTCCCTTCEEEESCCCC
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCc---ccchHHHHHHHhccccCCCeEEEEeCCCC
Confidence 332222321 246788884322 12222223333222 2466788888753
No 320
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=22.11 E-value=1.4e+02 Score=28.35 Aligned_cols=89 Identities=9% Similarity=-0.031 Sum_probs=42.2
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHHhcccCCcEEEE-eCC-CCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCH---
Q 009523 233 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV--- 306 (532)
Q Consensus 233 l~all~~G-d~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~-vd~-~dle~Le~al~~~~tklV~lesP~NptG~v~dl--- 306 (532)
+..+...| |-+++++..+.. ...+...++.+|+.+.+ +.+ .+.+.+++.... ....+|+.+....||...+.
T Consensus 115 ~~~~~~aG~dgvii~dl~~ee-~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~-a~gfiy~vs~~g~TG~~~~~~~~ 192 (262)
T 2ekc_A 115 CRLSREKGIDGFIVPDLPPEE-AEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEA-ADEMTYFVSVTGTTGAREKLPYE 192 (262)
T ss_dssp HHHHHHTTCCEEECTTCCHHH-HHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHH-CSSCEEEESSCC---------CH
T ss_pred HHHHHHcCCCEEEECCCCHHH-HHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHh-CCCCEEEEecCCccCCCCCcCcc
Confidence 33344445 667777665533 22333456777876433 333 344555554433 23456665666667766443
Q ss_pred --HHHHHHHHh-CCCEEEEE
Q 009523 307 --KLVSDLCHK-KGAIVCID 323 (532)
Q Consensus 307 --~~I~~la~~-~gi~lIvD 323 (532)
.++.+..++ .+++++++
T Consensus 193 ~~~~~v~~vr~~~~~pv~vG 212 (262)
T 2ekc_A 193 RIKKKVEEYRELCDKPVVVG 212 (262)
T ss_dssp HHHHHHHHHHHHCCSCEEEE
T ss_pred cHHHHHHHHHhhcCCCEEEe
Confidence 244444444 47777774
No 321
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.05 E-value=2e+02 Score=27.38 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=41.2
Q ss_pred EEEeCCHHHHHH-HHHHHhccCCCEEEEcCCCCcchHHHHHHhc--ccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEE
Q 009523 219 TVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVL--PKMGITATVIDPADMEGLEAALNNNNVSLFFT 293 (532)
Q Consensus 219 ~i~~sSG~~Ai~-~al~all~~Gd~VIv~~~~y~~t~~~~~~~l--~~~Gv~v~~vd~~dle~Le~al~~~~tklV~l 293 (532)
.+++++|+..|- .++..|++.|.+|++....-........... ...++.+...|..|.+.++++++..++..|+-
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 84 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH 84 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence 455555543332 3345567788888776543322222222211 12356666667789999999887434566654
No 322
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=21.57 E-value=58 Score=31.40 Aligned_cols=69 Identities=16% Similarity=0.282 Sum_probs=36.9
Q ss_pred CCCEEEEcCCCCcchHHHHHHhcccCCcEEEEe---CC---C---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHH
Q 009523 239 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---DP---A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 309 (532)
Q Consensus 239 ~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~v---d~---~---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I 309 (532)
++..+++..+.|+- +++.+|++...+ .. . ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 173 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 238 (284)
T 2prs_A 173 KGKGYFVFHDAYGY-------FEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRP-------AVV 238 (284)
T ss_dssp TTCCEEEEESCCHH-------HHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSCS-------HHH
T ss_pred CCCeEEEECccHHH-------HHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 46778887766642 334455543222 11 1 3445555555556888887544332 223
Q ss_pred HHHHHhCCCEEE
Q 009523 310 SDLCHKKGAIVC 321 (532)
Q Consensus 310 ~~la~~~gi~lI 321 (532)
..++++.|+.++
T Consensus 239 ~~ia~~~g~~v~ 250 (284)
T 2prs_A 239 ESVARGTSVRMG 250 (284)
T ss_dssp HHHTTTSCCEEE
T ss_pred HHHHHHcCCeEE
Confidence 445667777664
No 323
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=21.52 E-value=19 Score=22.22 Aligned_cols=15 Identities=33% Similarity=0.654 Sum_probs=12.2
Q ss_pred cccccccccCCCCcccccCCCCC
Q 009523 7 SSQKILSFSSSCSSFECRSDPDF 29 (532)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (532)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~Ck~DsDC 16 (28)
T 1mct_I 2 ICPRIW--------MECTRDSDC 16 (28)
T ss_dssp CEECCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389998 899988774
No 324
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.99 E-value=4.3e+02 Score=23.22 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=43.5
Q ss_pred HHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCC-HHHHHHhhcCCCeeEEEEeCCCCCCC-cccC---H
Q 009523 232 MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD-MEGLEAALNNNNVSLFFTESPTNPFL-RCVD---V 306 (532)
Q Consensus 232 al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~d-le~Le~al~~~~tklV~lesP~NptG-~v~d---l 306 (532)
++..|++.|.+|++....-.. .....++++...|..| .+.++++++. ..+|+.+....... .-.+ .
T Consensus 16 l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~--~d~vi~~ag~~~~~~~~~n~~~~ 86 (219)
T 3dqp_A 16 LLKSLSTTDYQIYAGARKVEQ-------VPQYNNVKAVHFDVDWTPEEMAKQLHG--MDAIINVSGSGGKSLLKVDLYGA 86 (219)
T ss_dssp HHHHHTTSSCEEEEEESSGGG-------SCCCTTEEEEECCTTSCHHHHHTTTTT--CSEEEECCCCTTSSCCCCCCHHH
T ss_pred HHHHHHHCCCEEEEEECCccc-------hhhcCCceEEEecccCCHHHHHHHHcC--CCEEEECCcCCCCCcEeEeHHHH
Confidence 345667778777665432211 1111467777788889 9999999874 66666544332211 1111 3
Q ss_pred HHHHHHHHhCC
Q 009523 307 KLVSDLCHKKG 317 (532)
Q Consensus 307 ~~I~~la~~~g 317 (532)
..+.+.|++.+
T Consensus 87 ~~l~~a~~~~~ 97 (219)
T 3dqp_A 87 VKLMQAAEKAE 97 (219)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 45666666554
No 325
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=20.97 E-value=1e+02 Score=28.86 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=39.5
Q ss_pred HHHHHHhcccCCcEEEEeCCCCHH----HHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009523 254 RIFIETVLPKMGITATVIDPADME----GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 322 (532)
Q Consensus 254 ~~~~~~~l~~~Gv~v~~vd~~dle----~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lIv 322 (532)
...++..++..|.++...+..|.+ .++.++.. ++..|++.... +. ......+.+++.|+++|.
T Consensus 21 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~-~vdgiii~~~~-~~----~~~~~~~~~~~~~iPvV~ 87 (306)
T 8abp_A 21 WKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAAS-GAKGFVICTPD-PK----LGSAIVAKARGYDMKVIA 87 (306)
T ss_dssp HHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHT-TCCEEEEECSC-GG----GHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHc-CCCEEEEeCCC-ch----hhHHHHHHHHHCCCcEEE
Confidence 344455667779888877666654 45555555 68888884332 21 344555667778998774
No 326
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=20.91 E-value=1.9e+02 Score=28.30 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=41.4
Q ss_pred CCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCC------C---CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHH
Q 009523 240 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 310 (532)
Q Consensus 240 Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~------~---dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~ 310 (532)
+..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.++- -.+.|+
T Consensus 197 ~~~~v~~H~af~-------Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~----~~~~la 265 (313)
T 1toa_A 197 RRVLVTAHDAFG-------YFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHK----NVEALR 265 (313)
T ss_dssp GCEEEEEESCCH-------HHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCTH----HHHHHH
T ss_pred CCEEEEECCcHH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH----HHHHHH
Confidence 667888776664 245566777654421 1 34555566666678999986555431 134444
Q ss_pred HH--HHhCCCEE
Q 009523 311 DL--CHKKGAIV 320 (532)
Q Consensus 311 ~l--a~~~gi~l 320 (532)
+. |++.|+.+
T Consensus 266 ~~~~A~e~gv~v 277 (313)
T 1toa_A 266 DAVQARGHVVQI 277 (313)
T ss_dssp HHHHTTTCCCEE
T ss_pred ccchhhhcCCce
Confidence 33 37788765
No 327
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=20.91 E-value=3.1e+02 Score=29.51 Aligned_cols=74 Identities=15% Similarity=0.255 Sum_probs=38.6
Q ss_pred ccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCC-CHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009523 237 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 311 (532)
Q Consensus 237 l~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~-dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~ 311 (532)
+++||.|.+--+.-......+ ..+-+.|..+..++.. ..+.+...+++.+.++|++.......|...++..+.+
T Consensus 136 v~~Gd~V~i~~~~~~e~v~a~-lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~ 210 (663)
T 1ry2_A 136 VRKGDTVAVYMPMVPEAIITL-LAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVD 210 (663)
T ss_dssp CCTTCEEEECCCSSHHHHHHH-HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHH-HHHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHH
Confidence 356777666544332222111 1233456655555543 4566666665445677777555444566666655443
No 328
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=20.80 E-value=2.7e+02 Score=27.17 Aligned_cols=81 Identities=11% Similarity=0.093 Sum_probs=43.4
Q ss_pred HHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeC-CCCHHHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009523 233 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 311 (532)
Q Consensus 233 l~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd-~~dle~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~ 311 (532)
+..|++.|.+|++....-.... ...+....++++...| ..|.+.++++++. ...|+.............-..+.+
T Consensus 22 ~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~--~d~Vi~~a~~~~~~~~~~~~~l~~ 97 (352)
T 1xgk_A 22 IRVAAAVGHHVRAQVHSLKGLI--AEELQAIPNVTLFQGPLLNNVPLMDTLFEG--AHLAFINTTSQAGDEIAIGKDLAD 97 (352)
T ss_dssp HHHHHHTTCCEEEEESCSCSHH--HHHHHTSTTEEEEESCCTTCHHHHHHHHTT--CSEEEECCCSTTSCHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEECCCChhh--HHHHhhcCCcEEEECCccCCHHHHHHHHhc--CCEEEEcCCCCCcHHHHHHHHHHH
Confidence 3455567776665322211110 1111122367777778 8899999998865 566665333211111112356778
Q ss_pred HHHhCC
Q 009523 312 LCHKKG 317 (532)
Q Consensus 312 la~~~g 317 (532)
.|++.|
T Consensus 98 aa~~~g 103 (352)
T 1xgk_A 98 AAKRAG 103 (352)
T ss_dssp HHHHHS
T ss_pred HHHHcC
Confidence 887776
No 329
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=20.40 E-value=48 Score=34.14 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=27.5
Q ss_pred CCCCCCCcccCHHHHHHHHHhCCCEEEEECCC
Q 009523 295 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 326 (532)
Q Consensus 295 sP~NptG~v~dl~~I~~la~~~gi~lIvDet~ 326 (532)
.+....|...+++++++.||++|+-||+|-++
T Consensus 56 ~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 56 ELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CSCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 34445788889999999999999999999984
No 330
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.33 E-value=4.4e+02 Score=23.13 Aligned_cols=55 Identities=7% Similarity=0.093 Sum_probs=33.6
Q ss_pred HHHHhccCCCEEEEcCCCCcchHHHHHHhcccCCcEEEEeCCCCHHHHHHhhcCCCeeEEEEe
Q 009523 232 MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE 294 (532)
Q Consensus 232 al~all~~Gd~VIv~~~~y~~t~~~~~~~l~~~Gv~v~~vd~~dle~Le~al~~~~tklV~le 294 (532)
++..|++.|.+|++....-... ..+ ..++++...|..|.++++++++. +.+|+..
T Consensus 20 l~~~L~~~g~~V~~~~r~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~~ 74 (227)
T 3dhn_A 20 LLNEALNRGFEVTAVVRHPEKI-----KIE-NEHLKVKKADVSSLDEVCEVCKG--ADAVISA 74 (227)
T ss_dssp HHHHHHTTTCEEEEECSCGGGC-----CCC-CTTEEEECCCTTCHHHHHHHHTT--CSEEEEC
T ss_pred HHHHHHHCCCEEEEEEcCcccc-----hhc-cCceEEEEecCCCHHHHHHHhcC--CCEEEEe
Confidence 3455667788877665432110 011 14666666777899999999975 5666653
No 331
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=20.18 E-value=99 Score=26.26 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=49.4
Q ss_pred CcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchH-HHHHHhcccCCcEEEEe--C--C----CC---------H
Q 009523 217 ESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTR-IFIETVLPKMGITATVI--D--P----AD---------M 276 (532)
Q Consensus 217 ~~~i~~sSG~--~Ai~~al~all~~Gd~VIv~~~~y~~t~-~~~~~~l~~~Gv~v~~v--d--~----~d---------l 276 (532)
...+++++|+ +-+..+++.+.+.|..|.+- ...... .++...++.+..++.+. . . +| .
T Consensus 19 ~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~--g~R~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~d~~~g~~G~v~ 96 (142)
T 3lyu_A 19 GKILAIGAYTGIVEVYPIAKAWQEIGNDVTTL--HVTFEPMVILKEELEKAVTRHIVEPVPLNPNQDFLANMKNVSQRLK 96 (142)
T ss_dssp SEEEEEEETTHHHHHHHHHHHHHHTTCEEEEE--EEEEGGGCCSHHHHHTTSSEEEEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEECcCcHHHHHHHHHHHHhcCCcEEEE--EeCCHHHhhHHHHHHHHHhheEEEEeecccccCCCCCCCCCccchh
Confidence 3566666555 66777777787777665442 111100 00112222333233322 1 0 11 1
Q ss_pred HHHHHhhcCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEE
Q 009523 277 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 321 (532)
Q Consensus 277 e~Le~al~~~~tklV~lesP~NptG~v~dl~~I~~la~~~gi~lI 321 (532)
+.|++.+...+...||+|-|.- =++.+.+.++++|+..+
T Consensus 97 ~~l~~~~~~~~~~~vy~CGP~~------Mm~av~~~l~~~~~~~~ 135 (142)
T 3lyu_A 97 EKVRELLESEDWDLVFMVGPVG------DQKQVFEVVKEYGVPML 135 (142)
T ss_dssp HHHHHHHHSSCCSEEEEESCHH------HHHHHHHHHHHHTCCBC
T ss_pred HHHHHhcccCCCCEEEEECCHH------HHHHHHHHHHHcCCchh
Confidence 2344444332345788888751 15778888888888654
Done!