Query 009524
Match_columns 532
No_of_seqs 323 out of 1814
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 14:10:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009524.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009524hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03552 Cellulose_synt: Cellu 100.0 7E-135 2E-139 1102.8 25.1 519 1-530 109-706 (720)
2 PLN02893 Cellulose synthase-li 100.0 6E-132 1E-136 1087.9 41.6 524 1-530 203-731 (734)
3 PLN02436 cellulose synthase A 100.0 6E-132 1E-136 1105.9 34.3 516 1-530 475-1074(1094)
4 PLN02400 cellulose synthase 100.0 2E-132 5E-137 1113.2 29.5 518 1-530 466-1064(1085)
5 PLN02638 cellulose synthase A 100.0 8E-132 2E-136 1108.5 30.1 518 1-530 459-1059(1079)
6 PLN02189 cellulose synthase 100.0 1E-131 3E-136 1104.0 30.9 517 1-530 441-1020(1040)
7 PLN02195 cellulose synthase A 100.0 5E-130 1E-134 1086.4 35.0 516 1-530 362-955 (977)
8 PLN02915 cellulose synthase A 100.0 5E-129 1E-133 1084.0 34.6 519 1-530 397-1024(1044)
9 PLN02190 cellulose synthase-li 100.0 2E-129 5E-134 1061.8 29.8 509 1-529 200-756 (756)
10 PLN02248 cellulose synthase-li 100.0 4E-127 9E-132 1069.6 34.3 506 14-530 521-1118(1135)
11 PRK11498 bcsA cellulose syntha 100.0 5.5E-55 1.2E-59 493.6 36.0 380 33-496 284-681 (852)
12 TIGR03030 CelA cellulose synth 100.0 3.6E-54 7.9E-59 487.4 38.3 387 32-507 154-570 (713)
13 PRK05454 glucosyltransferase M 100.0 1.9E-31 4.1E-36 298.6 36.1 243 34-333 153-414 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 4.2E-32 9.1E-37 272.1 19.6 206 34-291 28-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 2.3E-28 4.9E-33 263.7 28.4 202 32-297 97-308 (444)
16 COG1215 Glycosyltransferases, 100.0 3.1E-28 6.6E-33 260.2 23.1 205 31-295 76-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 4.1E-27 8.8E-32 251.6 29.4 202 32-297 76-287 (420)
18 PRK14716 bacteriophage N4 adso 99.9 6.1E-26 1.3E-30 246.4 25.4 235 33-320 90-355 (504)
19 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 1.2E-25 2.6E-30 242.2 24.3 250 32-346 71-341 (439)
20 PRK11234 nfrB bacteriophage N4 99.9 6.3E-25 1.4E-29 247.4 22.6 208 34-294 88-334 (727)
21 cd06437 CESA_CaSu_A2 Cellulose 99.9 7.4E-24 1.6E-28 207.7 17.9 194 33-289 24-232 (232)
22 cd06421 CESA_CelA_like CESA_Ce 99.9 1.7E-23 3.6E-28 203.8 18.5 199 33-293 25-234 (234)
23 cd06435 CESA_NdvC_like NdvC_li 99.9 2.4E-23 5.3E-28 203.9 19.3 204 33-296 22-235 (236)
24 cd06427 CESA_like_2 CESA_like_ 99.9 8.5E-23 1.9E-27 201.9 18.7 203 33-296 24-237 (241)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 2.2E-23 4.7E-28 203.0 6.3 194 34-288 25-228 (228)
26 PRK15489 nfrB bacteriophage N4 99.9 9E-21 1.9E-25 211.8 23.3 211 33-293 95-341 (703)
27 COG2943 MdoH Membrane glycosyl 99.8 4.6E-19 1E-23 185.9 25.9 246 33-336 174-437 (736)
28 TIGR03472 HpnI hopanoid biosyn 99.8 3.2E-19 7E-24 188.5 23.9 198 32-290 63-273 (373)
29 cd04190 Chitin_synth_C C-termi 99.8 1.1E-20 2.3E-25 188.0 11.7 172 82-291 64-243 (244)
30 cd04192 GT_2_like_e Subfamily 99.8 1.1E-19 2.5E-24 175.7 18.0 196 33-288 20-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.8 3.8E-19 8.3E-24 173.6 17.9 200 38-291 28-234 (235)
32 cd02520 Glucosylceramide_synth 99.8 2E-19 4.4E-24 172.2 14.0 164 33-288 24-195 (196)
33 PF13632 Glyco_trans_2_3: Glyc 99.8 1.1E-18 2.3E-23 166.4 12.1 137 98-289 1-143 (193)
34 cd06439 CESA_like_1 CESA_like_ 99.7 9.1E-17 2E-21 158.8 18.0 192 34-292 53-251 (251)
35 cd02525 Succinoglycan_BP_ExoA 99.7 1.3E-15 2.7E-20 149.3 16.5 191 39-295 32-233 (249)
36 cd06436 GlcNAc-1-P_transferase 99.7 7.2E-16 1.6E-20 147.4 13.9 140 38-185 25-177 (191)
37 TIGR03469 HonB hopene-associat 99.7 1.5E-14 3.1E-19 153.7 24.6 201 32-286 62-279 (384)
38 PF13506 Glyco_transf_21: Glyc 99.6 1.4E-14 3.1E-19 137.5 13.5 156 76-287 15-175 (175)
39 cd06438 EpsO_like EpsO protein 99.5 5.7E-14 1.2E-18 132.9 10.9 135 39-185 29-169 (183)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.4 7E-12 1.5E-16 119.4 14.6 162 34-261 24-194 (201)
41 cd04184 GT2_RfbC_Mx_like Myxoc 99.4 1.1E-11 2.3E-16 118.0 14.1 163 34-262 26-195 (202)
42 cd06433 GT_2_WfgS_like WfgS an 99.3 1.2E-11 2.6E-16 116.4 13.5 164 34-262 22-188 (202)
43 cd02526 GT2_RfbF_like RfbF is 99.3 1.3E-11 2.8E-16 120.6 10.4 167 38-261 24-197 (237)
44 cd02510 pp-GalNAc-T pp-GalNAc- 99.3 6.5E-11 1.4E-15 121.1 16.0 161 39-261 31-218 (299)
45 cd02522 GT_2_like_a GT_2_like_ 99.3 6.9E-11 1.5E-15 114.1 14.6 151 38-259 28-178 (221)
46 cd04186 GT_2_like_c Subfamily 99.3 7.6E-11 1.6E-15 107.6 13.1 131 38-261 26-158 (166)
47 cd06420 GT2_Chondriotin_Pol_N 99.2 2.3E-10 5E-15 107.0 13.9 143 38-263 26-175 (182)
48 cd06442 DPM1_like DPM1_like re 99.2 5.5E-10 1.2E-14 108.0 16.6 165 37-261 26-196 (224)
49 cd06913 beta3GnTL1_like Beta 1 99.1 1.5E-09 3.2E-14 105.4 16.1 173 34-262 21-203 (219)
50 TIGR01556 rhamnosyltran L-rham 99.1 7.1E-10 1.5E-14 112.2 14.4 168 39-261 22-194 (281)
51 cd04196 GT_2_like_d Subfamily 99.1 7.8E-10 1.7E-14 105.7 13.7 166 35-262 23-197 (214)
52 PLN02726 dolichyl-phosphate be 99.1 1E-09 2.2E-14 108.8 15.0 165 38-261 40-211 (243)
53 cd04185 GT_2_like_b Subfamily 99.1 2.9E-09 6.2E-14 101.7 14.9 138 39-262 27-167 (202)
54 cd06423 CESA_like CESA_like is 99.1 4.2E-10 9.2E-15 102.0 8.7 133 38-185 26-168 (180)
55 PF03142 Chitin_synth_2: Chiti 99.0 7.9E-09 1.7E-13 112.8 17.7 165 94-294 200-379 (527)
56 cd04188 DPG_synthase DPG_synth 99.0 1.2E-08 2.6E-13 98.5 15.0 77 38-124 30-110 (211)
57 PF00535 Glycos_transf_2: Glyc 99.0 9.4E-10 2E-14 99.7 6.2 138 36-185 25-167 (169)
58 PRK10073 putative glycosyl tra 99.0 6.2E-09 1.3E-13 108.5 13.2 199 33-293 29-243 (328)
59 PF10111 Glyco_tranf_2_2: Glyc 98.9 3.4E-08 7.4E-13 100.6 15.1 173 38-261 34-215 (281)
60 PRK10063 putative glycosyl tra 98.8 1E-07 2.2E-12 95.5 16.3 155 39-263 34-191 (248)
61 cd04179 DPM_DPG-synthase_like 98.8 2.6E-08 5.6E-13 93.2 10.2 136 36-185 26-165 (185)
62 KOG2571 Chitin synthase/hyalur 98.8 5.5E-08 1.2E-12 110.0 13.4 166 78-288 425-596 (862)
63 cd04187 DPM1_like_bac Bacteria 98.7 1.6E-07 3.5E-12 88.1 11.5 130 38-185 29-161 (181)
64 PRK10018 putative glycosyl tra 98.6 2.7E-07 5.9E-12 94.1 12.3 81 33-123 28-112 (279)
65 cd00761 Glyco_tranf_GTA_type G 98.6 3.8E-07 8.3E-12 80.5 10.8 126 38-258 26-155 (156)
66 COG1216 Predicted glycosyltran 98.6 3.5E-07 7.7E-12 94.2 10.7 178 34-268 27-219 (305)
67 PTZ00260 dolichyl-phosphate be 98.3 8.8E-06 1.9E-10 85.1 15.1 88 38-136 107-201 (333)
68 PRK13915 putative glucosyl-3-p 98.2 2.1E-05 4.5E-10 81.4 14.1 88 37-135 61-152 (306)
69 KOG2547 Ceramide glucosyltrans 98.1 3.3E-06 7.2E-11 87.0 6.0 202 26-287 102-314 (431)
70 PRK10714 undecaprenyl phosphat 97.8 0.00022 4.7E-09 74.4 13.0 76 38-123 38-117 (325)
71 cd02511 Beta4Glucosyltransfera 97.5 0.00029 6.2E-09 69.3 8.4 72 40-124 28-99 (229)
72 KOG2978 Dolichol-phosphate man 96.9 0.0074 1.6E-07 57.5 10.1 131 38-185 35-175 (238)
73 COG0463 WcaA Glycosyltransfera 95.9 0.027 5.9E-07 50.7 7.6 73 33-115 26-102 (291)
74 cd02514 GT13_GLCNAC-TI GT13_GL 95.4 0.11 2.3E-06 54.6 10.6 126 38-185 31-173 (334)
75 PF13704 Glyco_tranf_2_4: Glyc 93.2 0.25 5.3E-06 41.6 6.1 64 40-108 21-84 (97)
76 cd00899 b4GalT Beta-4-Galactos 92.7 0.39 8.5E-06 47.4 7.5 159 59-293 32-200 (219)
77 PF02364 Glucan_synthase: 1,3- 92.6 5.4 0.00012 46.4 17.3 199 66-315 261-481 (817)
78 KOG2977 Glycosyltransferase [G 87.5 2.7 5.8E-05 43.0 8.4 76 37-121 103-185 (323)
79 PF13712 Glyco_tranf_2_5: Glyc 81.7 2 4.3E-05 42.3 4.5 49 77-133 40-89 (217)
80 PF02709 Glyco_transf_7C: N-te 73.4 3.4 7.5E-05 33.9 3.0 50 169-261 17-66 (78)
81 COG4092 Predicted glycosyltran 73.2 30 0.00066 35.2 10.0 106 36-144 36-143 (346)
82 PF13896 Glyco_transf_49: Glyc 69.4 6.3 0.00014 41.1 4.6 45 84-133 120-164 (317)
83 KOG3736 Polypeptide N-acetylga 68.5 9.1 0.0002 43.1 5.8 176 41-277 177-380 (578)
84 PF05679 CHGN: Chondroitin N-a 65.2 32 0.0007 38.2 9.3 49 61-117 314-362 (499)
85 PRK09382 ispDF bifunctional 2- 64.8 42 0.00091 36.0 9.8 41 79-123 83-123 (378)
86 PF02434 Fringe: Fringe-like; 63.5 22 0.00047 35.8 7.0 27 94-121 85-111 (252)
87 KOG3737 Predicted polypeptide 60.9 7.2 0.00016 41.5 3.0 160 41-260 190-379 (603)
88 PLN03153 hypothetical protein; 59.0 51 0.0011 36.7 9.1 30 93-124 208-237 (537)
89 cd04182 GT_2_like_f GT_2_like_ 55.5 69 0.0015 29.4 8.6 43 77-122 74-117 (186)
90 TIGR03310 matur_ygfJ molybdenu 52.0 73 0.0016 29.5 8.1 54 62-123 63-117 (188)
91 cd02540 GT2_GlmU_N_bac N-termi 51.2 1.4E+02 0.0031 28.5 10.3 55 61-123 62-117 (229)
92 cd02503 MobA MobA catalyzes th 41.4 1.1E+02 0.0023 28.3 7.4 41 77-121 69-109 (181)
93 PF01762 Galactosyl_T: Galacto 39.6 77 0.0017 30.1 6.2 57 59-120 47-104 (195)
94 cd06915 NTP_transferase_WcbM_l 36.1 2.7E+02 0.0059 26.2 9.5 42 77-124 81-122 (223)
95 KOG0916 1,3-beta-glucan syntha 34.7 47 0.001 40.9 4.5 180 68-296 1039-1228(1679)
96 PRK00317 mobA molybdopterin-gu 34.0 86 0.0019 29.5 5.6 41 78-123 75-116 (193)
97 cd04181 NTP_transferase NTP_tr 33.6 2.5E+02 0.0054 26.4 8.8 42 77-124 81-122 (217)
98 TIGR02665 molyb_mobA molybdopt 33.6 92 0.002 28.9 5.7 42 77-123 73-115 (186)
99 PRK14503 mannosyl-3-phosphogly 31.2 53 0.0011 34.9 3.7 106 76-189 142-265 (393)
100 TIGR02460 osmo_MPGsynth mannos 30.9 54 0.0012 34.6 3.7 44 75-121 140-183 (381)
101 TIGR01173 glmU UDP-N-acetylglu 28.4 3.4E+02 0.0073 29.1 9.7 73 40-123 45-118 (451)
102 cd06422 NTP_transferase_like_1 26.8 3.7E+02 0.0081 25.6 8.8 40 77-122 82-121 (221)
103 KOG2887 Membrane protein invol 26.1 5.9E+02 0.013 24.4 9.6 51 472-525 77-127 (175)
104 PF09488 Osmo_MPGsynth: Mannos 25.9 94 0.002 33.0 4.5 41 76-119 141-181 (381)
105 PF12804 NTP_transf_3: MobA-li 24.8 2E+02 0.0043 25.8 6.1 54 77-136 70-124 (160)
106 KOG3588 Chondroitin synthase 1 24.8 2.8E+02 0.0062 29.8 7.7 130 77-260 298-429 (494)
107 PF04724 Glyco_transf_17: Glyc 24.8 2.2E+02 0.0047 30.4 7.1 55 61-117 138-199 (356)
108 KOG4112 Signal peptidase subun 24.6 1.2E+02 0.0025 26.0 3.9 27 486-512 63-89 (101)
109 COG4858 Uncharacterized membra 24.3 6.7E+02 0.015 24.4 9.4 61 449-511 100-160 (226)
110 PRK02726 molybdopterin-guanine 23.2 3.3E+02 0.0071 25.9 7.5 42 78-123 79-120 (200)
111 TIGR03584 PseF pseudaminic aci 22.2 6E+02 0.013 24.7 9.3 59 76-134 75-133 (222)
112 cd02509 GDP-M1P_Guanylyltransf 22.2 2.6E+02 0.0057 28.2 6.9 54 61-119 73-126 (274)
113 PF01128 IspD: 2-C-methyl-D-er 22.0 3.4E+02 0.0074 26.8 7.5 42 79-123 77-119 (221)
114 PRK14357 glmU bifunctional N-a 21.8 5.5E+02 0.012 27.5 9.8 43 77-123 73-116 (448)
115 PF13779 DUF4175: Domain of un 20.9 2E+02 0.0044 34.1 6.5 27 441-467 3-29 (820)
No 1
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=7.5e-135 Score=1102.85 Aligned_cols=519 Identities=43% Similarity=0.774 Sum_probs=475.8
Q ss_pred CcchhhHhh-hcCCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTAT-KLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||+++ +.+++||+.|.|+|| ++|++ ++++|||++|||+.|++++. |.+|+++|+++||+|||||+++||+|
T Consensus 109 ~k~ri~~~~~~~~~~~~~~~~~~~~-~~w~~-~~~~dH~~iiqv~~~~~~~~--~~~g~~lP~lvYvsREKrp~~~Hh~K 184 (720)
T PF03552_consen 109 FKVRIEALVAKIQKVPEEGWTMQDG-TPWPG-NTRRDHPGIIQVLLDNPGGK--DVDGNELPMLVYVSREKRPGYPHHFK 184 (720)
T ss_pred HHHHHHHHhhhhhcccccceeccCC-CcCCC-CCCcCChhheEeeccCCCCc--ccccCcCCeEEEEeccCCCCCCchhh
Confidence 689999986 567899999999999 99995 79999999999999987643 57788899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE 159 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~ 159 (532)
|||||+++|+|+++||+|||+|+|||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|+++++|+++
T Consensus 185 AGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~ 264 (720)
T PF03552_consen 185 AGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDIN 264 (720)
T ss_pred hcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCceeecccceeehHhhccCCCChhhHH-----------------------Hhh----h-------------c
Q 009524 160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKI-----------------------ELK----R-------------E 199 (532)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~-----------------------~~~----~-------------~ 199 (532)
++|+||+|||+|+||||+|||+||++..+....++ ... + +
T Consensus 265 ~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (720)
T PF03552_consen 265 MRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIE 344 (720)
T ss_pred ccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccc
Confidence 99999999999999999999999999755321000 000 0 0
Q ss_pred c----------------------c--------------h-hhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCC
Q 009524 200 N----------------------D--------------S-KREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVE 242 (532)
Q Consensus 200 ~----------------------g--------------~-~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtE 242 (532)
. | + ....+.++++|||++|+||+||++|.||+|+||.|||+||
T Consensus 345 ~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSvtE 424 (720)
T PF03552_consen 345 EGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSVTE 424 (720)
T ss_pred cccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEeccc
Confidence 0 0 0 0111345678999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccc-cCCcCccceeeecccccc
Q 009524 243 DVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCCYCLW 321 (532)
Q Consensus 243 D~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~ 321 (532)
|+.||++|||+||||+||+|+++||.|.||+|+.+.+.|++||+.|++||+++|+||+|++ .++|+++||++|++.++|
T Consensus 425 Dv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~y 504 (720)
T PF03552_consen 425 DVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYMLY 504 (720)
T ss_pred ccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999987 578999999999999999
Q ss_pred hhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHH
Q 009524 322 APNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAF 401 (532)
Q Consensus 322 ~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~ 401 (532)
|++|+|.++|+++|++||++|++++|+++.+|+++|+++++++++++++|++|+|+++++||||||||+|.++++|++|+
T Consensus 505 pl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~LfAv 584 (720)
T PF03552_consen 505 PLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHLFAV 584 (720)
T ss_pred HHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHH
Q 009524 402 IDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLL 481 (532)
Q Consensus 402 ~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~ 481 (532)
+++++|.+|+++++|+||+|..+++..+.+ +.|+|+ ++++++|++|++++|++|+++|+++.+++ + ...|+.+++
T Consensus 585 l~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~-g-~~~~g~l~g 659 (720)
T PF03552_consen 585 LQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINS-G-YGSWGPLLG 659 (720)
T ss_pred HHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhcc-C-CCchhHHHH
Confidence 999999999999999999999885544443 467774 68999999999999999999999999876 2 257999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 482 QILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 482 ~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
|+++++|+|+++|||+|||++|+| |+|++|++||+++|++||++|+.
T Consensus 660 ~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~ 706 (720)
T PF03552_consen 660 QLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVR 706 (720)
T ss_pred HHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHhee
Confidence 999999999999999999999986 58999999999999999999874
No 2
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=6.2e-132 Score=1087.95 Aligned_cols=524 Identities=38% Similarity=0.773 Sum_probs=485.2
Q ss_pred CcchhhHhhhcCCccHHH---HhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCC
Q 009524 1 MENRIQTATKLGRITEEI---RMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHN 77 (532)
Q Consensus 1 ~~~ri~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~ 77 (532)
||+|||++++.+++|++. +.++++|++|+++++++|||++|||+.|++++. |.+|.++|+++|++|||||+++||
T Consensus 203 ~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~--d~~g~~lP~lvYvsReKrp~~~Hh 280 (734)
T PLN02893 203 MKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDK--DITGHTMPNLIYVSREKSKNSPHH 280 (734)
T ss_pred HHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCcc--chhhccCCceEEEeCCCCCCCCcc
Confidence 799999999999999885 345577999999999999999999999987654 456677999999999999999999
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHH
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNE 157 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~ 157 (532)
+||||||+++|+|+.++|||||+|+||||++|+|++++++||||+||+.++++|+||+||+|+|.++||+|++++++||+
T Consensus 281 ~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~ 360 (734)
T PLN02893 281 FKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQ 360 (734)
T ss_pred cccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHH
Confidence 99999999999999999999999999999998999999999999999889999999999999999999999999999999
Q ss_pred HHHhhhhccCCceeecccceeehHhhccCCCC--hhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCcccccccc
Q 009524 158 VEFEGMDGYGGPIYCGSGCFHRREILCGRKYD--KETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGL 235 (532)
Q Consensus 158 ~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~ 235 (532)
++++|+||++||+|+||||+|||+||++.... .+...+++.......+...++++++|++|+||+||++|.||+++||
T Consensus 361 ~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~ 440 (734)
T PLN02893 361 INMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGF 440 (734)
T ss_pred HHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccce
Confidence 99999999999999999999999999986431 0111111111111223345789999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeee
Q 009524 236 KYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGY 315 (532)
Q Consensus 236 ~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y 315 (532)
.|+|+|||++||++||++||||+||+|++++|.|++|+|+.++++||+||++|++|++++|+||+++|.++|++.||++|
T Consensus 441 ~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y 520 (734)
T PLN02893 441 RYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGY 520 (734)
T ss_pred EeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHH
Confidence 99999999999999999999999999888899999999999999999999999999999999999987778999999999
Q ss_pred cccccchhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHH
Q 009524 316 CCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTT 395 (532)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~ 395 (532)
++.++||+.++|+++|+++|++||++|++++|+.+.+|+++|+++++++++++++|++|+|.++++|||+||+|+|++++
T Consensus 521 ~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~s 600 (734)
T PLN02893 521 AHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLS 600 (734)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccch
Q 009524 396 SFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKF 475 (532)
Q Consensus 396 ~~l~~~~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~ 475 (532)
+++++++++++|.+|+++.+|+||+|+.+++..++|++|.|+|+.++|+++|+++++++|++|+++|+++++.+ ..
T Consensus 601 s~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~----~~ 676 (734)
T PLN02893 601 SFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQ----RN 676 (734)
T ss_pred HHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhC----Cc
Confidence 99999999999999999999999999988888899999999998789999999999999999999999999875 35
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 476 YETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 476 ~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
|+.+++|+++|+|+|++++||+||++.|+||||||++|+++|++||.++|++..+
T Consensus 677 ~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~ 731 (734)
T PLN02893 677 LEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSF 731 (734)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 8888999999999999999999999999999999999999999999999987765
No 3
>PLN02436 cellulose synthase A
Probab=100.00 E-value=5.6e-132 Score=1105.91 Aligned_cols=516 Identities=34% Similarity=0.640 Sum_probs=472.0
Q ss_pred CcchhhHhhhc-CCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTATKL-GRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||++++. ++|||++|.|+|| ++|++ ++++|||++|||+.|++++. |.+|.++|++|||+|||||+++||+|
T Consensus 475 ~K~RIe~l~~~~~~vp~~~~~m~dg-t~W~g-~~~~dHp~IIqVll~~~~~~--d~~g~~LP~LVYVSREKRPg~~Hh~K 550 (1094)
T PLN02436 475 FKVKINALVATAQKVPEDGWTMQDG-TPWPG-NNVRDHPGMIQVFLGHSGVR--DVEGNELPRLVYVSREKRPGFDHHKK 550 (1094)
T ss_pred HHHHHHHHHhhcccCchhhhhhccC-ccCCC-CCCCCCccceEEEecCCCCc--ccccccCceEEEEecccCCCCCcchh
Confidence 69999999965 9999999988888 89996 58999999999999987542 46778899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE 159 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~ 159 (532)
|||||+++|+|+++||+|||||+|||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.
T Consensus 551 AGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~ 630 (1094)
T PLN02436 551 AGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDIN 630 (1094)
T ss_pred hhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCceeecccceeehHhhccCCCChhhHHH------h-------------------------------------
Q 009524 160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIE------L------------------------------------- 196 (532)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~------~------------------------------------- 196 (532)
++|+||+|||+|+||||+|||+|||+..+.++.+.+ |
T Consensus 631 ~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1094)
T PLN02436 631 MKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHAL 710 (1094)
T ss_pred ccccccCCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999997543111100 0
Q ss_pred h-----------------------h--------------ccch-hhhhhHHHHHHhhhhcccccccccCccccccccCCC
Q 009524 197 K-----------------------R--------------ENDS-KREESLLELEETSKALASCTYETNTQWGKEIGLKYG 238 (532)
Q Consensus 197 ~-----------------------~--------------~~g~-~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~ 238 (532)
. . ..|+ ..+.+.++++++|++|+||+||++|.||+|+||.||
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYG 790 (1094)
T PLN02436 711 ENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYG 790 (1094)
T ss_pred cccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeecc
Confidence 0 0 0000 011135678999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCcccccc-CCcCccceeeecc
Q 009524 239 CPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAH-GKISLGLRLGYCC 317 (532)
Q Consensus 239 svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~-~~l~~~qrl~y~~ 317 (532)
|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||+++|++|+++|. ++|+++||++|++
T Consensus 791 SvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~ 870 (1094)
T PLN02436 791 SVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYIN 870 (1094)
T ss_pred ceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHH
Confidence 999999999999999999999999888999999999999999999999999999999999998763 5799999999999
Q ss_pred cccchhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhH
Q 009524 318 YCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSF 397 (532)
Q Consensus 318 ~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~ 397 (532)
+++||+.++|.++|+++|++||++|++++|+++.+|+++|+++++++++++++|++|+|.++++|||+||||+|.+++++
T Consensus 871 ~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~ 950 (1094)
T PLN02436 871 SVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSH 950 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCeeeCcCCCccc-hhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchh
Q 009524 398 LFAFIDAILKTLGFSESSFVVTEKVADED-VSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFY 476 (532)
Q Consensus 398 l~~~~~~~~k~lg~~~~~F~VT~K~~~~~-~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~ 476 (532)
+|+++++++|.||+++++|.||+|..+++ .++ .|+|+ ++++++|+++++++|++|+++|+.+++.+ ++ +.|
T Consensus 951 Lfavl~~iLKvLggs~~~F~VTsK~~d~~~~a~-----ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~-g~-~~~ 1022 (1094)
T PLN02436 951 LFALFQGLLKVLAGVNTNFTVTSKAADDGEFSE-----LYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINN-GY-DSW 1022 (1094)
T ss_pred HHHHHHHHHHHhccCcccceecccccccccccc-----eeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhc-cc-cch
Confidence 99999999999999999999999987654 223 45786 89999999999999999999999999886 33 579
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 477 ETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 477 ~~~~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
+.+++|+++|+|+|+++|||+|||++| ++|+|++|++||+++|++++++|+.
T Consensus 1023 g~l~~~l~~~~wvvv~lyPf~kgL~gr--~~r~P~~v~v~s~lla~~~~l~~v~ 1074 (1094)
T PLN02436 1023 GPLFGRLFFALWVIVHLYPFLKGLLGK--QDRMPTIILVWSILLASILTLLWVR 1074 (1094)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeeehHHHHHHHHHHHHHHee
Confidence 999999999999999999999999955 4589999999999999999999974
No 4
>PLN02400 cellulose synthase
Probab=100.00 E-value=2.4e-132 Score=1113.20 Aligned_cols=518 Identities=33% Similarity=0.626 Sum_probs=475.2
Q ss_pred CcchhhHhh-hcCCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTAT-KLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||+++ +++++|+++|.|+|| ++|++ ++++|||++|||+.|++.+ .|.+|.++|++|||+|||||+++||+|
T Consensus 466 ~k~RIe~l~~~~~~~~~~~~~m~dg-t~W~g-~~~~dHp~iIqVll~~~~~--~d~~g~~LP~LVYVSREKRP~~~Hh~K 541 (1085)
T PLN02400 466 FKVRINALVAKAQKIPEEGWTMQDG-TPWPG-NNPRDHPGMIQVFLGHSGG--LDTDGNELPRLVYVSREKRPGFQHHKK 541 (1085)
T ss_pred HHHHHHHHHhhhccCCccccccccC-ccCCC-CCCCCCchhhhhhhcCCCC--cccccccCceeEEEeccCCCCCCcchh
Confidence 699999997 999999999988776 99996 5899999999999998764 245777899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE 159 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~ 159 (532)
|||||+++|+|+++||+|||||+|||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.
T Consensus 542 AGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~ 621 (1085)
T PLN02400 542 AGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDIN 621 (1085)
T ss_pred hhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCceeecccceeehHhhccCCCCh---hhH----------------------HHhhhc---------------
Q 009524 160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDK---ETK----------------------IELKRE--------------- 199 (532)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~---~~~----------------------~~~~~~--------------- 199 (532)
++|+||+|||+|+||||+|||+|||+..+.. +.+ .+++..
T Consensus 622 ~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1085)
T PLN02400 622 LKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMED 701 (1085)
T ss_pred ccccccCCCccccccCcceeeeeeccCCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999864310 000 000000
Q ss_pred --------------------------------------cch-hhhhhHHHHHHhhhhcccccccccCccccccccCCCCC
Q 009524 200 --------------------------------------NDS-KREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP 240 (532)
Q Consensus 200 --------------------------------------~g~-~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv 240 (532)
.|+ ....+.++++++|++|+||+||++|.||+|+||.|||+
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSv 781 (1085)
T PLN02400 702 IEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSV 781 (1085)
T ss_pred cccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccce
Confidence 000 11123567899999999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccc-cCCcCccceeeecccc
Q 009524 241 VEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCCYC 319 (532)
Q Consensus 241 tED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~ 319 (532)
|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||+++++||+++| .++|+++|||+|++++
T Consensus 782 TED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~ 861 (1085)
T PLN02400 782 TEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTI 861 (1085)
T ss_pred echHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999999988999999999999999999999999999999999999877 4789999999999999
Q ss_pred cchhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHH
Q 009524 320 LWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLF 399 (532)
Q Consensus 320 ~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~ 399 (532)
+||+.++|+++|+++|++||++|++++|+++.+++++|+++++++++++++|++|+|.++++|||+||||+|.++++++|
T Consensus 862 ~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lf 941 (1085)
T PLN02400 862 VYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLF 941 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHH
Q 009524 400 AFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETM 479 (532)
Q Consensus 400 ~~~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~ 479 (532)
+++++++|.||+++++|.||+|..+++.. ..++|+|+ ++++++|+++++++|++|+++|+++++.+ ++ ..|+.+
T Consensus 942 avl~~ilKvLgg~~~~F~VTsK~~d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~-g~-~~~g~l 1015 (1085)
T PLN02400 942 AVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINS-GY-QSWGPL 1015 (1085)
T ss_pred HHHHHHHHHhcCCcccceecCCccccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhc-cc-chhhHH
Confidence 99999999999999999999998765431 25788996 89999999999999999999999999886 33 579999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 480 LLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 480 ~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
++|+++|+|+|+++|||+|||++|+ +|+|++|++||+++|++++++|+.
T Consensus 1016 ~~~~~~~~wvvv~l~Pf~kgL~gR~--~r~P~~v~~~s~lla~~~~l~~v~ 1064 (1085)
T PLN02400 1016 FGKLFFAIWVIAHLYPFLKGLLGRQ--NRTPTIVIVWSILLASIFSLLWVR 1064 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999988 789999999999999999999974
No 5
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=8.3e-132 Score=1108.48 Aligned_cols=518 Identities=32% Similarity=0.621 Sum_probs=474.7
Q ss_pred CcchhhHhh-hcCCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTAT-KLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||+++ +++++|+++|.|.|| ++|+++ +++|||++|||+.|++.+. |.+|.++|+++||+|||||+++||+|
T Consensus 459 ~k~RIe~l~a~~~~~p~~~~~m~dg-t~W~g~-~~~dHp~IiqVll~~~~~~--d~~g~~lP~LVYVSREKRPg~~Hh~K 534 (1079)
T PLN02638 459 FKVRINGLVAKAQKVPEEGWIMQDG-TPWPGN-NTRDHPGMIQVFLGHSGGL--DTEGNELPRLVYVSREKRPGFQHHKK 534 (1079)
T ss_pred HHHHHHHHHhhccccCCccccccCC-ccCCCC-CCCCCHHHHHHHhcCCCcc--ccccccccceEEEecccCCCCCcccc
Confidence 699999997 899999999888777 999965 8999999999999987643 45677899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE 159 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~ 159 (532)
|||||+++|+|+++||+|||||+|||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|++++||+++
T Consensus 535 AGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~ 614 (1079)
T PLN02638 535 AGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDIN 614 (1079)
T ss_pred cchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCceeecccceeehHhhccCCCChhh-----------------------HHHhh------h------------
Q 009524 160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDKET-----------------------KIELK------R------------ 198 (532)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~-----------------------~~~~~------~------------ 198 (532)
++|+||+|||+|+||||+|||+||++..+.... ++.+. +
T Consensus 615 ~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1079)
T PLN02638 615 LRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLED 694 (1079)
T ss_pred cccccccCCccccccCcceeehhhcCcCCcccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 999999999999999999999999997432100 00000 0
Q ss_pred -------------------------ccc---------------hhhhhhHHHHHHhhhhcccccccccCccccccccCCC
Q 009524 199 -------------------------END---------------SKREESLLELEETSKALASCTYETNTQWGKEIGLKYG 238 (532)
Q Consensus 199 -------------------------~~g---------------~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~ 238 (532)
.-| .....+.+++++||++|+||+||++|.||+|+||.||
T Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YG 774 (1079)
T PLN02638 695 IEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYG 774 (1079)
T ss_pred ccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeec
Confidence 000 0011234678999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccc-cCCcCccceeeecc
Q 009524 239 CPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCC 317 (532)
Q Consensus 239 svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~ 317 (532)
|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||+++|+||+++| .++|++.||++|++
T Consensus 775 SvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~ 854 (1079)
T PLN02638 775 SVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVN 854 (1079)
T ss_pred ceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHH
Confidence 99999999999999999999999988899999999999999999999999999999999999876 36899999999999
Q ss_pred cccchhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhH
Q 009524 318 YCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSF 397 (532)
Q Consensus 318 ~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~ 397 (532)
+++||+.++|+++|+++|++||++|++++|+++.+|+++|+++|+++++++++|++|+|.++++|||+||||+|.+++++
T Consensus 855 ~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~ 934 (1079)
T PLN02638 855 TTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAH 934 (1079)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHH
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhh
Q 009524 398 LFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYE 477 (532)
Q Consensus 398 l~~~~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~ 477 (532)
+|+++++++|.||+++++|.||+|..+++.. +++.|+|+ |+|+|+|++|++++|++|+++|+++++.+ ++ ..|+
T Consensus 935 lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~-g~-~~~~ 1008 (1079)
T PLN02638 935 LFAVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINS-GY-QSWG 1008 (1079)
T ss_pred HHHHHHHHHHHHccCcccceecccccccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhc-Cc-cccc
Confidence 9999999999999999999999998765432 36788996 99999999999999999999999999876 33 4799
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 478 TMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 478 ~~~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
.+++|+++|+|+|+++|||+|||++|+ +|+|++|++||+++|++++++|+.
T Consensus 1009 ~~~~~~~~~~wvv~~l~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~ 1059 (1079)
T PLN02638 1009 PLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVVWSILLASIFSLLWVR 1059 (1079)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999998 688999999999999999999974
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.3e-131 Score=1103.95 Aligned_cols=517 Identities=33% Similarity=0.637 Sum_probs=474.2
Q ss_pred CcchhhHhh-hcCCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTAT-KLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||+++ +++++|+++|.|.|| ++|+++ +++|||++|||+.|++++. |.+|.++|+++||+|||||+++||+|
T Consensus 441 ~kvRI~~l~a~~~~~p~~~~~m~dG-t~W~g~-~~~dHp~IiQVll~~~~~~--d~~g~~lP~LVYVSREKrPg~~Hh~K 516 (1040)
T PLN02189 441 FKVRINAIVAKAQKVPPEGWIMQDG-TPWPGN-NTRDHPGMIQVFLGHSGGH--DTEGNELPRLVYVSREKRPGFQHHKK 516 (1040)
T ss_pred HHHHHHHHHhhcCccCCccceeccC-ccCCCC-CCCCCHHHHHHHhcCCCCc--cccccccceeEEEeccCCCCCCcccc
Confidence 699999997 999999999888777 999965 8999999999999987642 45677899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE 159 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~ 159 (532)
|||||+++|+|+++||+|||||+|||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|++++||+++
T Consensus 517 AGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~ 596 (1040)
T PLN02189 517 AGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDIN 596 (1040)
T ss_pred hhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCceeecccceeehHhhccCCCChh----------------------hHHHhhh-------------------
Q 009524 160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDKE----------------------TKIELKR------------------- 198 (532)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~----------------------~~~~~~~------------------- 198 (532)
++|+||+|||+|+||||+|||+||++..+.+. .+.+++.
T Consensus 597 ~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1040)
T PLN02189 597 MKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQM 676 (1040)
T ss_pred ecccccCCCccccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhh
Confidence 99999999999999999999999999744211 0000000
Q ss_pred ----c--------------cch-hhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEE
Q 009524 199 ----E--------------NDS-KREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVY 259 (532)
Q Consensus 199 ----~--------------~g~-~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y 259 (532)
. .++ ......+++++||++|+||+||++|.||+|+||.|||+|||+.||++||++||||+|
T Consensus 677 ~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY 756 (1040)
T PLN02189 677 NFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIY 756 (1040)
T ss_pred hhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEe
Confidence 0 000 111134678899999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCcccccc--CCcCccceeeecccccchhhHHHHHHHHHHhHH
Q 009524 260 CKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAH--GKISLGLRLGYCCYCLWAPNCLATLFYSIVPSL 337 (532)
Q Consensus 260 ~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l 337 (532)
|+|++++|.|+||+|+.+++.||+||++|++||+++++||+++|. ++|+++||++|+++++||+.++|+++|+++|++
T Consensus 757 ~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l 836 (1040)
T PLN02189 757 CMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAI 836 (1040)
T ss_pred cCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999889999999999999999999999999999999999998763 579999999999999999999999999999999
Q ss_pred HHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHHHHHHHHHhCCCCCCee
Q 009524 338 YLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFV 417 (532)
Q Consensus 338 ~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~~~k~lg~~~~~F~ 417 (532)
||++|++++|.++.+++++|+.+++++++++++|++|+|.++++|||+||||+|.++++++|+++++++|.||+++++|+
T Consensus 837 ~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~ 916 (1040)
T PLN02189 837 CLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFT 916 (1040)
T ss_pred HHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHHHHHHHHHHHHHHHHhh
Q 009524 418 VTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLY 497 (532)
Q Consensus 418 VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~ 497 (532)
||+|..+++.. ++.|+|+ ++|+++|++|++++|++|+++|+++++.+ ++ ..|+.+++|+++|+|+|+++|||+
T Consensus 917 VTsK~~~d~~~----~~ly~f~-~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~-~~-~~~~~~~~~~~~~~wvv~~~~Pf~ 989 (1040)
T PLN02189 917 VTSKATDDDEF----GELYAFK-WTTLLIPPTTLLIINIVGVVAGISDAINN-GY-QSWGPLFGKLFFAFWVIVHLYPFL 989 (1040)
T ss_pred ecccccccccc----ccceeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhc-Cc-cccchhHHHHHHHHHHHHHHHHHH
Confidence 99998766431 4788996 89999999999999999999999999886 33 479999999999999999999999
Q ss_pred hhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 498 QGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 498 ~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
|||++|+ +|+|++|++||++++++++++|+.
T Consensus 990 kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~ 1020 (1040)
T PLN02189 990 KGLMGRQ--NRTPTIVVIWSVLLASIFSLLWVR 1020 (1040)
T ss_pred HHHhccC--CCCCeeehHHHHHHHHHHHHHHhe
Confidence 9999998 688999999999999999999975
No 7
>PLN02195 cellulose synthase A
Probab=100.00 E-value=5.1e-130 Score=1086.44 Aligned_cols=516 Identities=32% Similarity=0.601 Sum_probs=469.8
Q ss_pred CcchhhHhhhc-CCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTATKL-GRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||++++. +++|+++|.|.|| ++|++ ++++|||++|||+.|++++ .|.+|.++|++|||+|||||+++||+|
T Consensus 362 ~k~RIe~~~~~~~~~~~~~~~m~d~-t~W~g-~~~~dHp~IIqVll~~~~~--~d~~g~~lP~LVYVSREKrPg~~Hh~K 437 (977)
T PLN02195 362 YKVRVNALVAKAQKTPEEGWTMQDG-TPWPG-NNTRDHPGMIQVFLGETGA--RDIEGNELPRLVYVSREKRPGYQHHKK 437 (977)
T ss_pred HHHHHHHHHhhcccCCcccccccCC-ccCCC-CCCCCCcchhhhhccCCCC--cccccccCceeEEEeccCCCCCCcccc
Confidence 69999999855 8999999877666 99996 5899999999999887654 356777899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE 159 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~ 159 (532)
|||||+++|+|+++||+|||+|+|||||+|+|++++++||||+||+.++++||||+||+|+|.+++|+|++++++||+++
T Consensus 438 AGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~ 517 (977)
T PLN02195 438 AGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVN 517 (977)
T ss_pred cchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeee
Confidence 99999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCceeecccceeehHhhccCCCChh------------------hHHHh-----h----h--------------
Q 009524 160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDKE------------------TKIEL-----K----R-------------- 198 (532)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~------------------~~~~~-----~----~-------------- 198 (532)
++|+||+|||+|+||||+|||+||++..+..- .+.+. . +
T Consensus 518 ~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (977)
T PLN02195 518 MKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREID 597 (977)
T ss_pred eccccccCCccccccCceeeehhhhccCccccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 99999999999999999999999998642110 00000 0 0
Q ss_pred ------------------c--------------cc-hhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHH
Q 009524 199 ------------------E--------------ND-SKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVI 245 (532)
Q Consensus 199 ------------------~--------------~g-~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~ 245 (532)
. .+ .......+++++||++|+||+||++|.||+|+||.|||+|||+.
T Consensus 598 ~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~ 677 (977)
T PLN02195 598 NYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDIL 677 (977)
T ss_pred ccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHH
Confidence 0 00 00111245688999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCcccccc--CCcCccceeeecccccchh
Q 009524 246 TGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAH--GKISLGLRLGYCCYCLWAP 323 (532)
Q Consensus 246 t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~ 323 (532)
||++||++||||+||+|.+++|.|+||+|+.+++.||+||++|++||+++++||+++|. ++|+++||++|+++++||+
T Consensus 678 TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~ 757 (977)
T PLN02195 678 TGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPF 757 (977)
T ss_pred HHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999888999999999999999999999999999999999998763 6899999999999999999
Q ss_pred hHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHHHH
Q 009524 324 NCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFID 403 (532)
Q Consensus 324 ~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~ 403 (532)
.++|+++|+++|++||++|++++|+++.+++++|+++++++++++++|++|+|.++++||||||||+|+++++|+|++++
T Consensus 758 ~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~ 837 (977)
T PLN02195 758 TSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQ 837 (977)
T ss_pred HHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHH
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCeeeCcCCCccc-hhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHHH
Q 009524 404 AILKTLGFSESSFVVTEKVADED-VSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQ 482 (532)
Q Consensus 404 ~~~k~lg~~~~~F~VT~K~~~~~-~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~~ 482 (532)
+++|.+|+++++|.||+|..+++ .++ .|+|+ ++|+++|++|++++|++|+++|+++++.+ ++ +.|+.+++|
T Consensus 838 ~llKvLggs~~~F~VTsK~~dd~~~~~-----~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~-~~-~~~g~l~~~ 909 (977)
T PLN02195 838 GFLKMLAGLDTNFTVTAKAADDTEFGE-----LYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNK-GY-EAWGPLFGK 909 (977)
T ss_pred HHHHHHcCCCccceeccccccccchhc-----ceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhc-Cc-chhhhHHHH
Confidence 99999999999999999987653 334 45786 89999999999999999999999999886 33 579999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 483 ILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 483 ~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
+++|+|+|+++|||+|||++|+ +|+|++|++||+++|++++++|+.
T Consensus 910 ~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~ 955 (977)
T PLN02195 910 VFFAFWVILHLYPFLKGLMGRQ--NRTPTIVVLWSVLLASVFSLVWVK 955 (977)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHee
Confidence 9999999999999999999998 688999999999999999999974
No 8
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=4.5e-129 Score=1083.96 Aligned_cols=519 Identities=33% Similarity=0.618 Sum_probs=469.5
Q ss_pred CcchhhHhhhc-CCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTATKL-GRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||++++. +++|+++|.|+|| ++|+++ ..+|||++|||+.|++.+ .|.+|.++|++|||||||||+++||+|
T Consensus 397 ~K~RIe~l~~~~~~~~~~~~~m~dg-t~W~g~-~~~dHp~IIqVll~~~~~--~d~~g~~lP~LVYVSREKRP~~~Hh~K 472 (1044)
T PLN02915 397 FKVRINALVAKAQKKPEEGWVMQDG-TPWPGN-NTRDHPGMIQVYLGSEGA--LDVEGKELPRLVYVSREKRPGYNHHKK 472 (1044)
T ss_pred HHHHHHHHHhhhccCCcccccccCC-ccCCCC-CCCCCccceEEeecCCCC--cccccCccceeEEEecccCCCCCcchh
Confidence 69999999855 9999999888776 999965 559999999999998654 356778899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE 159 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~ 159 (532)
|||||+++|+|+++||+|||||+|||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.
T Consensus 473 AGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~ 552 (1044)
T PLN02915 473 AGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDIN 552 (1044)
T ss_pred hhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccCCceeecccceeehHhhccCCCChhh---------HHHhh---------------------------------
Q 009524 160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDKET---------KIELK--------------------------------- 197 (532)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~---------~~~~~--------------------------------- 197 (532)
++|+||+|||+|+||||+|||+|||+..+.+.. ..+|.
T Consensus 553 ~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1044)
T PLN02915 553 MKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRK 632 (1044)
T ss_pred cccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999987442100 00000
Q ss_pred -----------------------------h---------------------c--------------cch-hhhhhHHHHH
Q 009524 198 -----------------------------R---------------------E--------------NDS-KREESLLELE 212 (532)
Q Consensus 198 -----------------------------~---------------------~--------------~g~-~~~~~~~~~~ 212 (532)
. . .++ ......++++
T Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l 712 (1044)
T PLN02915 633 KKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALI 712 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHH
Confidence 0 0 000 0011245789
Q ss_pred HhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhh
Q 009524 213 ETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQI 292 (532)
Q Consensus 213 ~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi 292 (532)
++|++|+||+||++|.||+|+||.|||+|||+.||++||++||||+||+|++++|.|+||+|+.++++||+||++|++||
T Consensus 713 ~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqI 792 (1044)
T PLN02915 713 KEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 792 (1044)
T ss_pred HHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHhhcCccccc-cCCcCccceeeecccccchhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHH
Q 009524 293 MLCRYSPARYA-HGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAE 371 (532)
Q Consensus 293 ~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle 371 (532)
++++++|++++ .++|+++||++|+++++||+.++|+++|+++|++||++|++++|.++..+.+.|+++++++++++++|
T Consensus 793 f~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE 872 (1044)
T PLN02915 793 FMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLE 872 (1044)
T ss_pred HHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 36899999999999999999999999999999999999999999876655556677888999999999
Q ss_pred HHHhcCCccccchhhHHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHH
Q 009524 372 FLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTL 451 (532)
Q Consensus 372 ~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l 451 (532)
++|+|.++++|||+||||+|.++++|+|+++++++|.||+++++|+||+|..+++..++ .+.|+|+ ++|+++|++++
T Consensus 873 ~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttl 949 (1044)
T PLN02915 873 LRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTL 949 (1044)
T ss_pred HHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986654332 4788996 99999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCcccchhhHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 452 ALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 452 ~~l~l~alv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
+++|++|+++|+++++++ ++ +.|+.+++++++++|+|+++|||++||++|+ +|+|++|++||+++|++++++|+.
T Consensus 950 lllNlvalv~Gi~~~i~~-~~-~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v~ 1024 (1044)
T PLN02915 950 IILNMVGVVAGVSDAINN-GY-GSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWVR 1024 (1044)
T ss_pred HHHHHHHHHHHHHHHHhc-cc-chhHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHhe
Confidence 999999999999999875 32 5789999999999999999999999999998 688999999999999999999985
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=2.5e-129 Score=1061.82 Aligned_cols=509 Identities=32% Similarity=0.553 Sum_probs=452.6
Q ss_pred CcchhhHhhhcCCccHHHHhhcCC-cccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524 1 MENRIQTATKLGRITEEIRMKHKG-FSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK 79 (532)
Q Consensus 1 ~~~ri~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K 79 (532)
||+|||+|++ +++ |.+.++ +..|+ +++++|||++|||+.|++++ +.+++++|+++||+|||||+++||+|
T Consensus 200 ~k~ri~~a~~-~~~----~~~~~~~~~~~~-~~~~~dH~~iiqVll~~~~~---~~~~~~lP~LVYvSREKrP~~~Hh~K 270 (756)
T PLN02190 200 LSRKVEDATG-DSH----WLDAEDDFEAFS-NTKPNDHSTIVKVVWENKGG---VGDEKEVPHLVYISREKRPNYLHHYK 270 (756)
T ss_pred HHHHHHhhcc-CCC----CcccCCcccccC-CCCCCCCccceEEEecCCCC---ccccccCceEEEEeccCCCCCCcccc
Confidence 6899999873 333 333333 66777 68999999999999998543 23567899999999999999999999
Q ss_pred HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCC-CeEEEEeccceeecCCcccccchhhHHhHHH
Q 009524 80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKG-HEFAFVQFPQNFDNVTKNELYSNSLRIYNEV 158 (532)
Q Consensus 80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~-~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~ 158 (532)
|||||+++|+|+++||+|||+|+|||||+|||++++++||||+|++.+ +++||||+||+|+ |+|+|+++++|++
T Consensus 271 AGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~ 345 (756)
T PLN02190 271 AGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSY 345 (756)
T ss_pred cchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEE
Confidence 999999999999999999999999999999999999999999998644 5899999999997 5799999999999
Q ss_pred HHhhhhccCCceeecccceeehHhhccCCCChhh-------------HHH--hhhccch----------------hhhhh
Q 009524 159 EFEGMDGYGGPIYCGSGCFHRREILCGRKYDKET-------------KIE--LKRENDS----------------KREES 207 (532)
Q Consensus 159 ~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~-------------~~~--~~~~~g~----------------~~~~~ 207 (532)
.++|+||+|||+|+||||+|||+|||+..+..-. ..+ ..+..|. ....+
T Consensus 346 ~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~ 425 (756)
T PLN02190 346 LGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNS 425 (756)
T ss_pred eeccccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccc
Confidence 9999999999999999999999999997532100 000 0011111 01223
Q ss_pred HHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcc
Q 009524 208 LLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSE 287 (532)
Q Consensus 208 ~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~ 287 (532)
+++++|||++|+||+||++|.||+|+||.|+|+|||+.||++||++||||+||+|++++|.|.+|+++.+.+.||+||++
T Consensus 426 ~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~ 505 (756)
T PLN02190 426 LTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWAT 505 (756)
T ss_pred hHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhh
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhhcCccccc-cCCcCccceeeecccccchhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHH
Q 009524 288 GDFQIMLCRYSPARYA-HGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYT 366 (532)
Q Consensus 288 G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~ 366 (532)
|++|++++++||++.+ .++|+++||++|++..+ |++++|+++|+++|++||++|++++|+. +|+.+++++++++++
T Consensus 506 G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~ 582 (756)
T PLN02190 506 GLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCL 582 (756)
T ss_pred hhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHH
Confidence 9999999999999875 57899999999999988 9999999999999999999999999975 578888888899999
Q ss_pred HHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCcCCCc-------------cchhhhhhh
Q 009524 367 YSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVAD-------------EDVSQRYEK 433 (532)
Q Consensus 367 ~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~~~k~lg~~~~~F~VT~K~~~-------------~~~~~~y~~ 433 (532)
++++|++|+|+|+++||||||||+|+++++|++|++++++|.||+++++|+||+|..+ +++.++|++
T Consensus 583 ~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (756)
T PLN02190 583 YTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDS 662 (756)
T ss_pred HHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeeccccccccccccccccccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999999754 344688999
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcC-cccchhhHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcch
Q 009524 434 EIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGD-GYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSS 512 (532)
Q Consensus 434 ~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~ 512 (532)
|+|+|+ +||+++|.++++++|++|+++|+++++... +-++.|+.+ +|+++|+|+|++++||+|||+ |||||+||+|
T Consensus 663 ~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s 739 (756)
T PLN02190 663 GKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLS 739 (756)
T ss_pred ceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChh
Confidence 999997 899999999999999999999999876430 112456665 999999999999999999998 9999999999
Q ss_pred hHHHHHHHHHHHHHHhh
Q 009524 513 VTTKSLVLALSVCTCFT 529 (532)
Q Consensus 513 ~~~~s~~~~~~~~~~~~ 529 (532)
|+++|++||.+|+++++
T Consensus 740 ~~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 740 TLSKAAFLAVLFVVFSV 756 (756)
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999999999875
No 10
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=4e-127 Score=1069.60 Aligned_cols=506 Identities=31% Similarity=0.576 Sum_probs=450.4
Q ss_pred ccHHHHhhcCCcccccCC-------CCCCCCCCEEEEEeCCCCh----------hHHh--hhccCCCcEEEEEeccCCCC
Q 009524 14 ITEEIRMKHKGFSQWVSY-------SSRLDHDTILQILIDGRDP----------NAVD--NEGCALPTLVYLAREKRPQY 74 (532)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~-------~~~~dhp~~v~Vldd~~~~----------~~~~--~~~~~~p~l~yv~Rekrp~~ 74 (532)
+||++| |+|| ++|+|+ ++++|||++|||+.|+++. ...| ..+.++|++|||+|||||++
T Consensus 521 ~~~~~w-m~dg-t~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~ 598 (1135)
T PLN02248 521 VPKATW-MADG-THWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGY 598 (1135)
T ss_pred ccccee-eccC-CcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCC
Confidence 345556 7788 777764 7899999999999886541 1223 22347999999999999999
Q ss_pred CCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHH
Q 009524 75 SHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRI 154 (532)
Q Consensus 75 ~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~ 154 (532)
+||+||||||+++|+|+++||+|||||+|||||+|||++++++||||+||+ ++++||||+||+|+|+++||+|+|++++
T Consensus 599 ~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I~k~D~Ygn~~~V 677 (1135)
T PLN02248 599 DHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGIDPSDRYANHNTV 677 (1135)
T ss_pred CcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcccCCCCCCCccCCccee
Confidence 999999999999999999999999999999999999999999999999997 8999999999999999999999999999
Q ss_pred hHHHHHhhhhccCCceeecccceeehHhhccCCCChh---------------hHHHhh----------------------
Q 009524 155 YNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKE---------------TKIELK---------------------- 197 (532)
Q Consensus 155 ~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~---------------~~~~~~---------------------- 197 (532)
||+++++|+||+|||+|+||||+|||+||++..+... .+++..
T Consensus 678 ffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1135)
T PLN02248 678 FFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLP 757 (1135)
T ss_pred eeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 9999999999999999999999999999999643210 000000
Q ss_pred hccch-----------------------------------hhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCC
Q 009524 198 RENDS-----------------------------------KREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVE 242 (532)
Q Consensus 198 ~~~g~-----------------------------------~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtE 242 (532)
...|. ......+++++||++|++|+||++|.||+|+||.|+|+||
T Consensus 758 ~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTE 837 (1135)
T PLN02248 758 KRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTE 837 (1135)
T ss_pred hhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceec
Confidence 00000 0000124678999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccch
Q 009524 243 DVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWA 322 (532)
Q Consensus 243 D~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 322 (532)
|+.||++||++||||+||+|++++|.|++|+|+.++++||+||++|++||++++++|++++ ++|++.||++|+++++||
T Consensus 838 Dv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~QRL~Yl~~~lyp 916 (1135)
T PLN02248 838 DVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFLQRIAYLNVGIYP 916 (1135)
T ss_pred hHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999888999999999999999999999999999999999998765 579999999999999999
Q ss_pred hhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHH-HHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHH
Q 009524 323 PNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAY-VMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAF 401 (532)
Q Consensus 323 ~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~-~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~ 401 (532)
+.++++++|+++|++||++|++++|+. .++|+++++ +++++++++++|++|+|.++++|||+||||+|.++++|++++
T Consensus 917 f~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~ 995 (1135)
T PLN02248 917 FTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAV 995 (1135)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHH
Confidence 999999999999999999999999986 455666664 567889999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHH
Q 009524 402 IDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLL 481 (532)
Q Consensus 402 ~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~ 481 (532)
+++++|.+|+++++|+||+|+.+++..++| ++.|+|+ ++++++|+++++++|++|+++|++|++.+ .+ +.|+.+++
T Consensus 996 l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R~i~g-~~-~~~~~l~g 1071 (1135)
T PLN02248 996 LQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSRTIYS-EI-PQWSKLLG 1071 (1135)
T ss_pred HHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHHHHhc-cC-cchhhhHH
Confidence 999999999999999999999887766778 6899996 89999999999999999999999999875 32 56899999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524 482 QILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 530 (532)
Q Consensus 482 ~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~ 530 (532)
++++++|+++++|||+|||++| ++|+|++|++||++++++++++|+.
T Consensus 1072 ~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~v~ 1118 (1135)
T PLN02248 1072 GVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLWVA 1118 (1135)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHheE
Confidence 9999999999999999999999 5788999999999999999999985
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=5.5e-55 Score=493.59 Aligned_cols=380 Identities=21% Similarity=0.274 Sum_probs=302.5
Q ss_pred CCCCCCC---EEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCC
Q 009524 33 SRLDHDT---ILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSN 109 (532)
Q Consensus 33 ~~~dhp~---~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~ 109 (532)
..+|||. .|+|+|||++|++.+.+.+ .++.|++|++ |.|+||||+|+|++. +++|||+++|||+++
T Consensus 284 l~~dYP~~k~EViVVDDgS~D~t~~la~~--~~v~yI~R~~----n~~gKAGnLN~aL~~----a~GEyIavlDAD~ip- 352 (852)
T PRK11498 284 LGIDWPKDKLNIWILDDGGREEFRQFAQE--VGVKYIARPT----HEHAKAGNINNALKY----AKGEFVAIFDCDHVP- 352 (852)
T ss_pred HhccCCCCceEEEEEeCCCChHHHHHHHH--CCcEEEEeCC----CCcchHHHHHHHHHh----CCCCEEEEECCCCCC-
Confidence 4578885 5999999999987655442 4699999976 347999999999998 899999999999999
Q ss_pred chHHHHHHHHHh-hcccCCCeEEEEeccceeecCCccc-------ccchhhHHhHHHHHhhhhccCCceeecccceeehH
Q 009524 110 NSQAVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNE-------LYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRRE 181 (532)
Q Consensus 110 ~p~~l~~~~~~f-~d~~~~~~va~VQ~pq~f~n~~~nd-------~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~ 181 (532)
+||+|++++++| .|| ++|+||+||.|+|.++-. ...++...+|+.++.|++.+++.++||+++++||+
T Consensus 353 ~pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRRe 428 (852)
T PRK11498 353 TRSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRK 428 (852)
T ss_pred ChHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHH
Confidence 799999999886 576 799999999999865311 12345567899999999999999999999999999
Q ss_pred hhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 182 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
++++ +| ||++++++||+++++++|++||+++|++
T Consensus 429 aLee--------------VG--------------------------------Gfd~~titED~dlslRL~~~Gyrv~yl~ 462 (852)
T PRK11498 429 PLDE--------------IG--------------------------------GIAVETVTEDAHTSLRLHRRGYTSAYMR 462 (852)
T ss_pred HHHH--------------hc--------------------------------CCCCCccCccHHHHHHHHHcCCEEEEEe
Confidence 9998 64 8999999999999999999999999995
Q ss_pred CCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccchhhHHHHHHHHHHhHHHHhh
Q 009524 262 PERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLK 341 (532)
Q Consensus 262 ~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~ 341 (532)
.. ...|++|+|+.++++||.||++|++|+++. ++|++ .+++++.||++|++++++++.++|.++|+++|++|+++
T Consensus 463 ~~--~a~glaPesl~~~~~QR~RWarG~lQi~r~-~~pl~--~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~ 537 (852)
T PRK11498 463 IP--QAAGLATESLSAHIGQRIRWARGMVQIFRL-DNPLT--GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLL 537 (852)
T ss_pred cc--ceeEECCCCHHHHHHHHHHHHHHHHHHHHH-hChhc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 346999999999999999999999999966 58985 35799999999999999999999999999999999999
Q ss_pred CCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCcC
Q 009524 342 GIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEK 421 (532)
Q Consensus 342 g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~~~k~lg~~~~~F~VT~K 421 (532)
|+.++... +..+++++++.+....+.+...+|..+..||++ ++.++.++..+. ..+...+++++.+|+||||
T Consensus 538 gi~~i~a~---~~~i~~y~lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l~~-~~~~~ll~p~~~~F~VTpK 609 (852)
T PRK11498 538 HAYIIYAP---ALMIALFVLPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYIAP-PTTVALFNPHKGKFNVTAK 609 (852)
T ss_pred CChheeCC---hHHHHHHHHHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHHHH-HHHHHHcCccCCCcccCCC
Confidence 99888542 223334444444445556666677777888876 355555555444 4455578999999999999
Q ss_pred CCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcC-------cccchhhHHHHHHHHHHHHHHHHH
Q 009524 422 VADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGD-------GYVKFYETMLLQILLCSALVLINW 494 (532)
Q Consensus 422 ~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~ 494 (532)
++..+ ++.|+|+ +..|.++++++|++|+++|+++...++ ..+..|..+++.++..+..++.+.
T Consensus 610 g~~~~------~~~~~~~----~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~ 679 (852)
T PRK11498 610 GGLVE------EEYVDWV----ISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVES 679 (852)
T ss_pred Ccccc------ccceehH----HHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcC
Confidence 86543 3445654 455778899999999999999986631 123446666666666666666665
Q ss_pred Hh
Q 009524 495 PL 496 (532)
Q Consensus 495 P~ 496 (532)
|.
T Consensus 680 ~~ 681 (852)
T PRK11498 680 KQ 681 (852)
T ss_pred CC
Confidence 54
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=3.6e-54 Score=487.40 Aligned_cols=387 Identities=22% Similarity=0.284 Sum_probs=302.1
Q ss_pred CCCCCCCC---EEEEEeCCCChhH------------------HhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHc
Q 009524 32 SSRLDHDT---ILQILIDGRDPNA------------------VDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVS 90 (532)
Q Consensus 32 ~~~~dhp~---~v~Vldd~~~~~~------------------~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s 90 (532)
...+|||. .|+|+|||+.|++ .+.+. -.++.|++|++ |+|+||||||+++++
T Consensus 154 ~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~--~~~v~yi~r~~----n~~~KAgnLN~al~~- 226 (713)
T TIGR03030 154 AKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCR--KLGVNYITRPR----NVHAKAGNINNALKH- 226 (713)
T ss_pred HHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHH--HcCcEEEECCC----CCCCChHHHHHHHHh-
Confidence 34678884 5999999986542 11111 14799999987 457999999999998
Q ss_pred ccCCCCcEEEEecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCc---c----cccchhhHHhHHHHHhh
Q 009524 91 SKISNGQVTLNVDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTK---N----ELYSNSLRIYNEVEFEG 162 (532)
Q Consensus 91 ~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~---n----d~~~~~~~~~~~~~~~g 162 (532)
+++|+|+++|||+++ +||+|++++++|. || ++|+||+||.|+|.+. | +.+.++...+|..++.|
T Consensus 227 ---a~gd~Il~lDAD~v~-~pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g 298 (713)
T TIGR03030 227 ---TDGELILIFDADHVP-TRDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDG 298 (713)
T ss_pred ---cCCCEEEEECCCCCc-ChhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHH
Confidence 899999999999999 7999999999995 66 7999999999998653 2 12345567788899999
Q ss_pred hhccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCC
Q 009524 163 MDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVE 242 (532)
Q Consensus 163 ~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtE 242 (532)
++.+++++++|+++++||+++++ +| ||++++++|
T Consensus 299 ~~~~~~~~~~Gs~~~iRR~al~~--------------iG--------------------------------Gf~~~~vtE 332 (713)
T TIGR03030 299 NDFWNAAFFCGSAAVLRREALDE--------------IG--------------------------------GIAGETVTE 332 (713)
T ss_pred HhhhCCeeecCceeEEEHHHHHH--------------cC--------------------------------CCCCCCcCc
Confidence 99999999999999999999998 64 888899999
Q ss_pred hHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccch
Q 009524 243 DVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWA 322 (532)
Q Consensus 243 D~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 322 (532)
|++++++||++||+++|++.. .+.|++|+|++++++||.||++|++|+++.+ +|++ .+++++.||++|+++++||
T Consensus 333 D~~l~~rL~~~G~~~~y~~~~--~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~~~-~pl~--~~gl~~~qrl~y~~~~~~~ 407 (713)
T TIGR03030 333 DAETALKLHRRGWNSAYLDRP--LIAGLAPETLSGHIGQRIRWAQGMMQIFRLD-NPLL--KRGLSFPQRLCYLNAMLFW 407 (713)
T ss_pred HHHHHHHHHHcCCeEEEeccc--cccccCCCCHHHHHHHHHHHhcChHHHHhhh-Cccc--cCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999643 4579999999999999999999999999764 7885 3579999999999999999
Q ss_pred hhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHH-HHHhcCCccccchhhHHHHHHHHHhHHHHH
Q 009524 323 PNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAE-FLWSGGTALGWWNEQRLWLYLRTTSFLFAF 401 (532)
Q Consensus 323 ~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle-~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~ 401 (532)
+.+++.++|+++|++++++|+++++..... .++++ +.+++.+++. ...+|.....||++ ++. +...++.+
T Consensus 408 ~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~---~~~~~-lp~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~ 478 (713)
T TIGR03030 408 FFPLPRVIFLTAPLAYLFFGLNIFVASALE---ILAYA-LPHMLHSLLTNSYLFGRVRWPFWSE----VYE-TVLAVYLL 478 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcceeCCHHH---HHHHH-HHHHHHHHHHHHHHcCCeecchHHH----HHH-HHHHHHHH
Confidence 999999999999999999999999864222 22222 3344445544 44567778889987 344 34445777
Q ss_pred HHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHH
Q 009524 402 IDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLL 481 (532)
Q Consensus 402 ~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~ 481 (532)
..++.+.+++++.+|+||||++..+. . ..++++.|.++++++|++|+++|+++....+ ..-..+.+
T Consensus 479 ~~~~~~~~~~~~~~F~VT~Kg~~~~~--~---------~~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~~ 544 (713)
T TIGR03030 479 PPVLVTLLNPKKPKFNVTPKGELLDE--D---------YFSPLSRPYLILFALILAGLAFGLYRIYGYP---IERGVLLV 544 (713)
T ss_pred HHHHHHHhCcCCCCceecCCCccccc--c---------ccchHHHHHHHHHHHHHHHHHHHHHHHhcCc---cccchhhH
Confidence 78888889999999999999875432 1 1248899999999999999999999986431 11122334
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCC
Q 009524 482 QILLCSALVLINWPLYQGLFLRKDNG 507 (532)
Q Consensus 482 ~~~~~~~~v~~~~P~~~gl~~r~~k~ 507 (532)
.++++.|.+++...-+....+|++++
T Consensus 545 ~~~w~~~n~~~~~~~~~~~~~r~QrR 570 (713)
T TIGR03030 545 VLGWNLLNLILLGAALAVVAERRQRR 570 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 44455554444444444444454443
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.9e-31 Score=298.58 Aligned_cols=243 Identities=15% Similarity=0.172 Sum_probs=183.4
Q ss_pred CCCCC--CEEEEEeCCCChhHHh-------hhccC---CCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEE
Q 009524 34 RLDHD--TILQILIDGRDPNAVD-------NEGCA---LPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLN 101 (532)
Q Consensus 34 ~~dhp--~~v~Vldd~~~~~~~~-------~~~~~---~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~Ilv 101 (532)
++||+ ..|+|+||++++++.. +..++ -+++.|.+|++ |.++||||+|.+++.++ .++|||++
T Consensus 153 ~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~eyivv 226 (691)
T PRK05454 153 ATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRR----NVGRKAGNIADFCRRWG--GAYDYMVV 226 (691)
T ss_pred hcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCc----CCCccHHHHHHHHHhcC--CCcCEEEE
Confidence 45565 3589999999987421 11112 35789988876 45789999999999854 57899999
Q ss_pred ecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhH----HhHHHHHhhhhccC--Cceeecc
Q 009524 102 VDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLR----IYNEVEFEGMDGYG--GPIYCGS 174 (532)
Q Consensus 102 lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~----~~~~~~~~g~d~~~--~~~~~Gt 174 (532)
+|||+++ .+|++++++.+|+ || ++|+||+++.+.|.+ ..++..+. ++......|++.|+ ...|+|+
T Consensus 227 LDADs~m-~~d~L~~lv~~m~~dP----~vGlVQt~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~ 299 (691)
T PRK05454 227 LDADSLM-SGDTLVRLVRLMEANP----RAGLIQTLPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGH 299 (691)
T ss_pred EcCCCCC-CHHHHHHHHHHHhhCc----CEEEEeCCccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccc
Confidence 9999999 7999999999997 77 799999999988854 34444332 22234567777665 3569999
Q ss_pred cceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcC
Q 009524 175 GCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQG 254 (532)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~G 254 (532)
|+++||+++.+.+..+.. . | .+||..++++||+++|.+|+++|
T Consensus 300 naIiR~~af~~~~glp~L-------~-----------------------------g-~~p~~~~~LseD~~~a~~l~~~G 342 (691)
T PRK05454 300 NAIIRVKAFAEHCGLPPL-------P-----------------------------G-RGPFGGHILSHDFVEAALMRRAG 342 (691)
T ss_pred eEEEEHHHHHHhcCCccc-------c-----------------------------c-cCCCCCCcccHHHHHHHHHHHCC
Confidence 999999999873211110 0 1 14787889999999999999999
Q ss_pred CEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccchhhHHHHHHHHH
Q 009524 255 WKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSI 333 (532)
Q Consensus 255 wrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~ 333 (532)
|+++|++ +....++++|+|+.++++||.||++|++|++.. +. .+++++.+|++|++..+.++.+...+++++
T Consensus 343 yrV~~~p-d~~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~-----l~-~~gl~~~~R~~~l~g~~~yl~~P~wll~l~ 414 (691)
T PRK05454 343 WGVWLAP-DLPGSYEELPPNLLDELKRDRRWCQGNLQHLRL-----LL-AKGLHPVSRLHFLTGIMSYLSAPLWLLFLL 414 (691)
T ss_pred CEEEEcC-ccccccccCCCCHHHHHHHHHHHHhchHHHHHH-----HH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999994 433457999999999999999999999999843 22 356999999998887776666554444333
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=4.2e-32 Score=272.14 Aligned_cols=206 Identities=19% Similarity=0.272 Sum_probs=160.0
Q ss_pred CCCC--CCEEEEEeCCCChhHH--h---------hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEE
Q 009524 34 RLDH--DTILQILIDGRDPNAV--D---------NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTL 100 (532)
Q Consensus 34 ~~dh--p~~v~Vldd~~~~~~~--~---------~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~Il 100 (532)
.+|| ...|+|+||+++++.. + +.+ +.++++|++|+++ .|.||||||.+++..+ +++|+|+
T Consensus 28 ~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~-~~~~v~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~ 100 (254)
T cd04191 28 KTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELG-AQGRIYYRRRREN----TGRKAGNIADFCRRWG--SRYDYMV 100 (254)
T ss_pred hcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhC-CCCcEEEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEE
Confidence 4566 3469999999987531 1 112 2578999999985 4789999999998632 5789999
Q ss_pred EecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhh----HHhHHHHHhhhhccCC--ceeec
Q 009524 101 NVDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSL----RIYNEVEFEGMDGYGG--PIYCG 173 (532)
Q Consensus 101 vlDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~----~~~~~~~~~g~d~~~~--~~~~G 173 (532)
++|||+.+ +|++|++++.+|. || ++|+||+|+.+.|.+. .+...+ ..+...++.|++.|++ .+++|
T Consensus 101 ~~DaD~~~-~p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 173 (254)
T cd04191 101 VLDADSLM-SGDTIVRLVRRMEANP----RAGIIQTAPKLIGAET--LFARLQQFANRLYGPVFGRGLAAWQGGEGNYWG 173 (254)
T ss_pred EEeCCCCC-CHHHHHHHHHHHHhCC----CEEEEeCCceeECCCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCccCccc
Confidence 99999999 7999999999996 77 7999999999998652 233222 3344556777776643 57899
Q ss_pred ccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHc
Q 009524 174 SGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQ 253 (532)
Q Consensus 174 tg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~ 253 (532)
+++++||++|++....++ +| .-+||..++++||+++|++++.+
T Consensus 174 ~~~~~Rr~al~~~~~~~~--------i~-----------------------------g~g~~~~~~l~eD~~l~~~~~~~ 216 (254)
T cd04191 174 HNAIIRVAAFMEHCALPV--------LP-----------------------------GRPPFGGHILSHDFVEAALMRRA 216 (254)
T ss_pred eEEEEEHHHHHHhcCCcc--------cc-----------------------------CCCCCCCCeecHHHHHHHHHHHc
Confidence 999999999987221110 12 12478888999999999999999
Q ss_pred CCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchh
Q 009524 254 GWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQ 291 (532)
Q Consensus 254 Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lq 291 (532)
||+++|.+ ...+.++++|+|++++++||.||++|++|
T Consensus 217 G~ri~~~~-~~~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 217 GWEVRLAP-DLEGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred CCEEEEcc-CCcceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 99999984 33334689999999999999999999998
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.97 E-value=2.3e-28 Score=263.73 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=160.5
Q ss_pred CCCCCCCCE-EEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC
Q 009524 32 SSRLDHDTI-LQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY 107 (532)
Q Consensus 32 ~~~~dhp~~-v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~ 107 (532)
..+++||+. |.|+||+++|++.+ +...+.|++.++.++++ ++||+|+|.|++. +++|+++++|||++
T Consensus 97 ll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n-----~Gka~AlN~gl~~----a~~d~iv~lDAD~~ 167 (444)
T PRK14583 97 ALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHN-----QGKAIALRMGAAA----ARSEYLVCIDGDAL 167 (444)
T ss_pred HHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCCC
Confidence 356788864 88999999887643 22334688888877542 4799999999998 78999999999999
Q ss_pred CCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchh----hHHhHHHHHhhhhccCCce-eecccceeehH
Q 009524 108 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNS----LRIYNEVEFEGMDGYGGPI-YCGSGCFHRRE 181 (532)
Q Consensus 108 ~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~----~~~~~~~~~~g~d~~~~~~-~~Gtg~~~RR~ 181 (532)
+ +||++++++..|. || +++.||+.+...|.+ ...+.. ....++...++.+..+..+ .+|+++++||+
T Consensus 168 ~-~~d~L~~lv~~~~~~~----~~g~v~g~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~ 240 (444)
T PRK14583 168 L-DKNAVPYLVAPLIANP----RTGAVTGNPRIRTRS--TLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRR 240 (444)
T ss_pred c-CHHHHHHHHHHHHhCC----CeEEEEccceecCCC--cchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHH
Confidence 9 8999999998776 44 799999987766532 223322 2333444556666666554 57999999999
Q ss_pred hhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 182 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
++++ +| ||+.+.++||++++++++.+||++.|++
T Consensus 241 al~~--------------vG--------------------------------g~~~~~i~ED~dl~~rl~~~G~~i~~~p 274 (444)
T PRK14583 241 ALAD--------------VG--------------------------------YWSPDMITEDIDISWKLQLKHWSVFFEP 274 (444)
T ss_pred HHHH--------------cC--------------------------------CCCCCcccccHHHHHHHHHcCCeEEEee
Confidence 9987 54 8999999999999999999999999984
Q ss_pred CCcccccccCCCCHHHHHHHHHHhcccchhhHHhhc
Q 009524 262 PERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRY 297 (532)
Q Consensus 262 ~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~ 297 (532)
+ +..++++|+|++++++||.||++|.+|+++++.
T Consensus 275 -~-a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~ 308 (444)
T PRK14583 275 -R-GLCWILMPETLRGLWKQRLRWAQGGAEVFLKNM 308 (444)
T ss_pred -c-cEEeeeCCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 4 355799999999999999999999999997753
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=3.1e-28 Score=260.22 Aligned_cols=205 Identities=22% Similarity=0.265 Sum_probs=160.4
Q ss_pred CCCCCCCCC-EEEEEeCCCChhHHh---hhccCC-CcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCC
Q 009524 31 YSSRLDHDT-ILQILIDGRDPNAVD---NEGCAL-PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCD 105 (532)
Q Consensus 31 ~~~~~dhp~-~v~Vldd~~~~~~~~---~~~~~~-p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD 105 (532)
...++|||. .|.|+||+++|++.+ +.+.+. |.++.+.. ..++++|++|+|.+++. +++|+|+++|||
T Consensus 76 s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~gK~~al~~~l~~----~~~d~V~~~DaD 147 (439)
T COG1215 76 SLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYP----EKKNGGKAGALNNGLKR----AKGDVVVILDAD 147 (439)
T ss_pred HHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEec----cccCccchHHHHHHHhh----cCCCEEEEEcCC
Confidence 367899997 699999988887633 344444 46666532 12458999999999998 779999999999
Q ss_pred CCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH-----HhhhhccCCceeecccceeeh
Q 009524 106 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE-----FEGMDGYGGPIYCGSGCFHRR 180 (532)
Q Consensus 106 ~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~-----~~g~d~~~~~~~~Gtg~~~RR 180 (532)
+++ +||+|++++..|.|++ .++.+|.|+.+.+.+....++..+...|... ..+.+.....+++|++.++||
T Consensus 148 ~~~-~~d~l~~~~~~f~~~~---~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr 223 (439)
T COG1215 148 TVP-EPDALRELVSPFEDPP---VGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRR 223 (439)
T ss_pred CCC-ChhHHHHHHhhhcCCC---eeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEH
Confidence 999 7999999999999874 4578999988776532222333333333322 222222235678999999999
Q ss_pred HhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEe
Q 009524 181 EILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYC 260 (532)
Q Consensus 181 ~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~ 260 (532)
++|++ +| ||...++|||.++++++|.+|||+.|+
T Consensus 224 ~aL~~--------------~g--------------------------------~~~~~~i~ED~~lt~~l~~~G~~~~~~ 257 (439)
T COG1215 224 SALEE--------------VG--------------------------------GWLEDTITEDADLTLRLHLRGYRVVYV 257 (439)
T ss_pred HHHHH--------------hC--------------------------------CCCCCceeccHHHHHHHHHCCCeEEEe
Confidence 99998 53 799999999999999999999999999
Q ss_pred cCCcccccccCCCCHHHHHHHHHHhcccchhhHHh
Q 009524 261 KPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLC 295 (532)
Q Consensus 261 ~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~ 295 (532)
+. +...+++|+|+.++++||.||++|.+|++..
T Consensus 258 ~~--~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 258 PE--AIVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred ec--ceEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 54 3568999999999999999999999999975
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.96 E-value=4.1e-27 Score=251.59 Aligned_cols=202 Identities=19% Similarity=0.203 Sum_probs=158.3
Q ss_pred CCCCCCCC-EEEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC
Q 009524 32 SSRLDHDT-ILQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY 107 (532)
Q Consensus 32 ~~~~dhp~-~v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~ 107 (532)
..+++||. .|.|+||+++|++.+ +...+.|++.+++++++ .+|++|+|.+++. +++|+++++|||++
T Consensus 76 l~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n-----~Gka~aln~g~~~----a~~d~i~~lDaD~~ 146 (420)
T PRK11204 76 LLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAEN-----QGKANALNTGAAA----ARSEYLVCIDGDAL 146 (420)
T ss_pred HHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC
Confidence 34678886 589999999887643 23345688999887653 4799999999998 78999999999999
Q ss_pred CCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHHhH----HHHHhhhhccCCce-eecccceeehH
Q 009524 108 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYN----EVEFEGMDGYGGPI-YCGSGCFHRRE 181 (532)
Q Consensus 108 ~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~----~~~~~g~d~~~~~~-~~Gtg~~~RR~ 181 (532)
+ +||++.+++..|+ || +++.||+.....|.. ...+..+...| .....+....+... .+|+++++||+
T Consensus 147 ~-~~d~L~~l~~~~~~~~----~v~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~ 219 (420)
T PRK11204 147 L-DPDAAAYMVEHFLHNP----RVGAVTGNPRIRNRS--TLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKS 219 (420)
T ss_pred C-ChhHHHHHHHHHHhCC----CeEEEECCceeccch--hHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHH
Confidence 9 7999999999985 65 799999987766532 22233222222 22333333344433 47999999999
Q ss_pred hhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 182 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
++.+ +| ||+++.++||++++++++++||++.|+
T Consensus 220 ~l~~--------------vg--------------------------------g~~~~~~~ED~~l~~rl~~~G~~i~~~- 252 (420)
T PRK11204 220 ALHE--------------VG--------------------------------YWSTDMITEDIDISWKLQLRGWDIRYE- 252 (420)
T ss_pred HHHH--------------hC--------------------------------CCCCCcccchHHHHHHHHHcCCeEEec-
Confidence 9987 54 888889999999999999999999998
Q ss_pred CCcccccccCCCCHHHHHHHHHHhcccchhhHHhhc
Q 009524 262 PERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRY 297 (532)
Q Consensus 262 ~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~ 297 (532)
|+ +.++++.|+|++++++||+||++|.+|+++++.
T Consensus 253 p~-~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~~ 287 (420)
T PRK11204 253 PR-ALCWILMPETLKGLWKQRLRWAQGGAEVLLKNF 287 (420)
T ss_pred cc-cEEEeECcccHHHHHHHHHHHhcCHHHHHHHHH
Confidence 44 355799999999999999999999999997753
No 18
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.95 E-value=6.1e-26 Score=246.45 Aligned_cols=235 Identities=17% Similarity=0.137 Sum_probs=160.1
Q ss_pred CCCCCCC-EEEEEeCCCChhHH---hhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcc--cC---CCCcEEEEec
Q 009524 33 SRLDHDT-ILQILIDGRDPNAV---DNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSS--KI---SNGQVTLNVD 103 (532)
Q Consensus 33 ~~~dhp~-~v~Vldd~~~~~~~---~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~--~~---s~~~~IlvlD 103 (532)
..+|||. .|.|++|+++|++. ++...+.|+++.+. .++++ .++||+|||.+++... .. ..+|+|+++|
T Consensus 90 ~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~D 166 (504)
T PRK14716 90 ATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHD 166 (504)
T ss_pred HcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEc
Confidence 3578887 49999988887753 33345678877555 23332 2589999999998531 11 2349999999
Q ss_pred CCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhh----HHhHHHHHhhhhccCCce-eeccccee
Q 009524 104 CDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL----RIYNEVEFEGMDGYGGPI-YCGSGCFH 178 (532)
Q Consensus 104 aD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~----~~~~~~~~~g~d~~~~~~-~~Gtg~~~ 178 (532)
||+++ +|++|+.....+.| .++||.|....+.+.+...+..+ ...+...+..++.+++++ ++|+|++|
T Consensus 167 AD~~v-~Pd~Lr~~~~~~~~------~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~af 239 (504)
T PRK14716 167 AEDVI-HPLELRLYNYLLPR------HDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAF 239 (504)
T ss_pred CCCCc-CccHHHHHHhhcCC------CCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEe
Confidence 99999 89999976655433 46899997765543322222222 122233456678888764 79999999
Q ss_pred ehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEE
Q 009524 179 RREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSV 258 (532)
Q Consensus 179 RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~ 258 (532)
||++|++... +.|| ++|+.+++|||+++|++++.+|||++
T Consensus 240 RR~aLe~l~~----------~~GG------------------------------~~fd~~sLTED~dLglRL~~~G~rv~ 279 (504)
T PRK14716 240 SRRALERLAA----------ERGG------------------------------QPFDSDSLTEDYDIGLRLKRAGFRQI 279 (504)
T ss_pred EHHHHHHHHh----------hcCC------------------------------CCCCCCCcchHHHHHHHHHHCCCEEE
Confidence 9999986100 0010 13999999999999999999999999
Q ss_pred EecCCc-------------ccccccCCCCHHHHHHHHHHhcccc-hhhHHhhcCccccc---cCCcCccceeeeccccc
Q 009524 259 YCKPER-------------DAFLGVSPTTLLQFLVQRKRWSEGD-FQIMLCRYSPARYA---HGKISLGLRLGYCCYCL 320 (532)
Q Consensus 259 y~~~~~-------------~a~~g~aP~tl~~~l~Qr~RWa~G~-lqi~~~~~~p~~~~---~~~l~~~qrl~y~~~~~ 320 (532)
|++... .+.++++|+|++++++||.||+.|. +|...+. . |.+ .+.+.+++|.+.+...+
T Consensus 280 y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~-g--w~~~~~~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 280 FVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERL-G--WKGPAATKYMLWRDRKGLLTNLL 355 (504)
T ss_pred EecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhc-C--CCCchhhhhhHHHHHHHHHHHHH
Confidence 985321 1345889999999999999999995 7886431 0 111 12355666666554433
No 19
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.94 E-value=1.2e-25 Score=242.23 Aligned_cols=250 Identities=15% Similarity=0.130 Sum_probs=172.4
Q ss_pred CCCCCCCC---EEEEEeCCCChhHHhh---hccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCC
Q 009524 32 SSRLDHDT---ILQILIDGRDPNAVDN---EGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCD 105 (532)
Q Consensus 32 ~~~~dhp~---~v~Vldd~~~~~~~~~---~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD 105 (532)
..++++|. .|.|+||+++|++.+. ..++.|++..+..++ .++||+|+|.|++. +++|+|+++|||
T Consensus 71 l~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD 141 (439)
T TIGR03111 71 IYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSD 141 (439)
T ss_pred HHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCC
Confidence 45688886 3889999999886442 233457665444332 26899999999998 789999999999
Q ss_pred CCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecC--Ccc-c---ccchhhHHhHHHH---Hhh--h-hccCCc-ee
Q 009524 106 MYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNV--TKN-E---LYSNSLRIYNEVE---FEG--M-DGYGGP-IY 171 (532)
Q Consensus 106 ~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~--~~n-d---~~~~~~~~~~~~~---~~g--~-d~~~~~-~~ 171 (532)
+++ +||++++++..|. || +++.|++.+.-... +.+ . .+..... +++.. ..| . ...+.. ..
T Consensus 142 ~~~-~~d~L~~l~~~f~~~~----~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~ 215 (439)
T TIGR03111 142 GKL-HKDAIKNMVTRFENNP----DIHAMTGVILTDKELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTL 215 (439)
T ss_pred CCc-ChHHHHHHHHHHHhCC----CeEEEEeEEecCchhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEE
Confidence 999 8999999999987 55 67777654422110 000 0 0001111 11111 111 1 122233 35
Q ss_pred ecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHH
Q 009524 172 CGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQ 251 (532)
Q Consensus 172 ~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~ 251 (532)
+|+++++||+++.+ +| ||+.++++||++++++++
T Consensus 216 sGa~~~~Rr~~l~~--------------vg--------------------------------gf~~~~i~ED~~l~~rl~ 249 (439)
T TIGR03111 216 SGAFSAFRRETILK--------------TQ--------------------------------LYNSETVGEDTDMTFQIR 249 (439)
T ss_pred ccHHHhhhHHHHHH--------------hC--------------------------------CCCCCCcCccHHHHHHHH
Confidence 78888999999987 54 899899999999999998
Q ss_pred H-cCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccchhhHHHHHH
Q 009524 252 C-QGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLF 330 (532)
Q Consensus 252 ~-~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~ 330 (532)
. .|+++.|+ |+ +.++.++|+|++++++||.||++|.+|++....++. .+ +..++.++..+..........+|.++
T Consensus 250 ~~~g~kv~~~-~~-a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (439)
T TIGR03111 250 ELLDGKVYLC-EN-AIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESA-NK-SIKGFFSNFMVRRIMYDHTFAFPRMI 325 (439)
T ss_pred HhcCCeEEEC-CC-CEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhh-hh-chhhhhhHHHHHHHHhhHhhHHHHHH
Confidence 5 68998888 44 466899999999999999999999999996644443 22 23455555444333444455778788
Q ss_pred HHHHhHHHHhhCCCcc
Q 009524 331 YSIVPSLYLLKGIPLF 346 (532)
Q Consensus 331 ~~~~P~l~ll~g~~~~ 346 (532)
+.+++.++.+++.++.
T Consensus 326 ~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 326 WYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHHHHhccHHH
Confidence 8888888877776544
No 20
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=6.3e-25 Score=247.42 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=150.5
Q ss_pred CCCCCCE-EEEEeCCCChhH---HhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHccc-----CCCCcEEEEecC
Q 009524 34 RLDHDTI-LQILIDGRDPNA---VDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSK-----ISNGQVTLNVDC 104 (532)
Q Consensus 34 ~~dhp~~-v~Vldd~~~~~~---~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~-----~s~~~~IlvlDa 104 (532)
.+|||+. |.|++|.+|+++ .+....++|+++.+.-++ |+ | ++||+|||.+++.... ....+.++++||
T Consensus 88 ~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~-~g-~-~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DA 164 (727)
T PRK11234 88 TLDYENYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCAR-PG-P-TSKADCLNNVLDAITQFERSANFAFAGFILHDA 164 (727)
T ss_pred hCCCCCeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCC-CC-C-CCHHHHHHHHHHHHHhhhcccCCcccEEEEEcC
Confidence 6899985 888877776654 334445678876555443 43 2 5899999999997311 123467889999
Q ss_pred CCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhH----HHHHhhhhccCCc-eeeccccee-
Q 009524 105 DMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYN----EVEFEGMDGYGGP-IYCGSGCFH- 178 (532)
Q Consensus 105 D~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~----~~~~~g~d~~~~~-~~~Gtg~~~- 178 (532)
|.++ +|++|+ .+.++.++ + ++||.|....+.+.+...+..+...| ...+++++.++++ .+.|+|+.|
T Consensus 165 D~~v-~pd~L~-~~~~l~~~----~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~ 237 (727)
T PRK11234 165 EDVI-SPMELR-LFNYLVER----K-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFS 237 (727)
T ss_pred CCCC-ChhHHH-HHHhhcCC----C-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEe
Confidence 9999 899998 66777775 4 89999966333222222333333333 3556888888765 479999999
Q ss_pred eh--HhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCE
Q 009524 179 RR--EILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWK 256 (532)
Q Consensus 179 RR--~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwr 256 (532)
|| ++|.+ +|| ..+|+.+++|||+++|++|+.+||+
T Consensus 238 Rr~l~al~~--------------~gg-----------------------------g~~~~~~~lTED~dlg~rL~~~G~~ 274 (727)
T PRK11234 238 RRAVTALLE--------------DGD-----------------------------GIAFDVQSLTEDYDIGFRLKEKGMR 274 (727)
T ss_pred cccHHHHHH--------------hcC-----------------------------CCCcCCCcchHHHHHHHHHHHCCCE
Confidence 66 45655 331 1269999999999999999999999
Q ss_pred EEEecCC---------------------cccccccCCCCHHHHHHHHHHhccc-chhhHH
Q 009524 257 SVYCKPE---------------------RDAFLGVSPTTLLQFLVQRKRWSEG-DFQIML 294 (532)
Q Consensus 257 s~y~~~~---------------------~~a~~g~aP~tl~~~l~Qr~RWa~G-~lqi~~ 294 (532)
++|++.. ..+++++.|+|+++.++||.||.+| .+|.+.
T Consensus 275 v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 275 EIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred EEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 9999611 1346788999999999999999999 577763
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.91 E-value=7.4e-24 Score=207.70 Aligned_cols=194 Identities=22% Similarity=0.291 Sum_probs=143.8
Q ss_pred CCCCCCC---EEEEEeCCCChhHHhhhc-------cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEe
Q 009524 33 SRLDHDT---ILQILIDGRDPNAVDNEG-------CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNV 102 (532)
Q Consensus 33 ~~~dhp~---~v~Vldd~~~~~~~~~~~-------~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~Ilvl 102 (532)
..|++|. .|.|+|| ++|++.+... ..-+.++++.+.++ .++|++|+|.+++. +++|+|+++
T Consensus 24 ~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~ 94 (232)
T cd06437 24 CALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADR----TGYKAGALAEGMKV----AKGEYVAIF 94 (232)
T ss_pred HhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCC----CCCchHHHHHHHHh----CCCCEEEEE
Confidence 3567774 5677887 4444322111 12367888877664 35799999999998 799999999
Q ss_pred cCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhh----HHhHHHHHhhhhccCCc-eeecccce
Q 009524 103 DCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL----RIYNEVEFEGMDGYGGP-IYCGSGCF 177 (532)
Q Consensus 103 DaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~----~~~~~~~~~g~d~~~~~-~~~Gtg~~ 177 (532)
|||+++ +|++|+++..++.|+ ++++||.+..+.|.+.+. ....+ ...+.....+....+.. .++|++++
T Consensus 95 DaD~~~-~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 168 (232)
T cd06437 95 DADFVP-PPDFLQKTPPYFADP----KLGFVQTRWGHINANYSL-LTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGV 168 (232)
T ss_pred cCCCCC-ChHHHHHhhhhhcCC----CeEEEecceeeEcCCCch-hhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhh
Confidence 999999 799999988877776 799999877666543321 11111 11233333444443433 35899999
Q ss_pred eehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEE
Q 009524 178 HRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKS 257 (532)
Q Consensus 178 ~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs 257 (532)
|||+++.+ +| ||+.....||++++.|++.+||+.
T Consensus 169 ~rr~~~~~--------------vg--------------------------------g~~~~~~~ED~~l~~rl~~~G~~~ 202 (232)
T cd06437 169 WRKECIED--------------AG--------------------------------GWNHDTLTEDLDLSYRAQLKGWKF 202 (232)
T ss_pred hhHHHHHH--------------hC--------------------------------CCCCCcchhhHHHHHHHHHCCCeE
Confidence 99999987 54 787778899999999999999999
Q ss_pred EEecCCcccccccCCCCHHHHHHHHHHhcccc
Q 009524 258 VYCKPERDAFLGVSPTTLLQFLVQRKRWSEGD 289 (532)
Q Consensus 258 ~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~ 289 (532)
+|+ |+ +.++.+.|+|+.++++||+||++|.
T Consensus 203 ~~~-~~-~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 203 VYL-DD-VVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred EEe-cc-ceeeeeCCcCHHHHHHHHHHhccCC
Confidence 999 44 3567999999999999999999984
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.91 E-value=1.7e-23 Score=203.83 Aligned_cols=199 Identities=31% Similarity=0.506 Sum_probs=155.6
Q ss_pred CCCCCCC---EEEEEeCCCChhHHhh---hccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC
Q 009524 33 SRLDHDT---ILQILIDGRDPNAVDN---EGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 33 ~~~dhp~---~v~Vldd~~~~~~~~~---~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~ 106 (532)
..|++|. .|.|+||++++++.+. .+.+ ..++++.+++ +.++|+||+|.+++. +++|+|+++|+|.
T Consensus 25 ~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~n~~~~~----a~~d~i~~lD~D~ 95 (234)
T cd06421 25 LAIDYPHDKLRVYVLDDGRRPELRALAAELGVE-YGYRYLTRPD----NRHAKAGNLNNALAH----TTGDFVAILDADH 95 (234)
T ss_pred HhcCCCcccEEEEEEcCCCchhHHHHHHHhhcc-cCceEEEeCC----CCCCcHHHHHHHHHh----CCCCEEEEEcccc
Confidence 3577787 6899999998876432 2222 2456776654 347899999999998 7899999999999
Q ss_pred CCCchHHHHHHHHHhhc-ccCCCeEEEEeccceeecCCcccc----cchhhHHhHHHHHhhhhccCCceeecccceeehH
Q 009524 107 YSNNSQAVRDALCFFMD-EEKGHEFAFVQFPQNFDNVTKNEL----YSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRRE 181 (532)
Q Consensus 107 ~~~~p~~l~~~~~~f~d-~~~~~~va~VQ~pq~f~n~~~nd~----~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~ 181 (532)
++ +|+++.+++..+.+ + +++.|++++.+.+.+.... +......++.....+...++...+.|+++++||+
T Consensus 96 ~~-~~~~l~~l~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~ 170 (234)
T cd06421 96 VP-TPDFLRRTLGYFLDDP----KVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRRE 170 (234)
T ss_pred Cc-CccHHHHHHHHHhcCC----CeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHH
Confidence 99 79999999999976 4 7999999988876543211 1222233344445555555667789999999999
Q ss_pred hhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 182 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
++++ +| ||+...+.||++++.+++++||+++|++
T Consensus 171 ~~~~--------------ig--------------------------------~~~~~~~~eD~~l~~r~~~~g~~i~~~~ 204 (234)
T cd06421 171 ALDE--------------IG--------------------------------GFPTDSVTEDLATSLRLHAKGWRSVYVP 204 (234)
T ss_pred HHHH--------------hC--------------------------------CCCccceeccHHHHHHHHHcCceEEEec
Confidence 9987 54 6776778999999999999999999985
Q ss_pred CCcccccccCCCCHHHHHHHHHHhcccchhhH
Q 009524 262 PERDAFLGVSPTTLLQFLVQRKRWSEGDFQIM 293 (532)
Q Consensus 262 ~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~ 293 (532)
.. ...++.|.++..+++|+.||.+|.+|++
T Consensus 205 ~~--~~~~~~~~~~~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 205 EP--LAAGLAPETLAAYIKQRLRWARGMLQIL 234 (234)
T ss_pred Cc--cccccCCccHHHHHHHHHHHhcCCeeeC
Confidence 43 4579999999999999999999999863
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.91 E-value=2.4e-23 Score=203.92 Aligned_cols=204 Identities=22% Similarity=0.326 Sum_probs=148.3
Q ss_pred CCCCCCC-EEEEEeCCCChhHH-----hhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC
Q 009524 33 SRLDHDT-ILQILIDGRDPNAV-----DNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 33 ~~~dhp~-~v~Vldd~~~~~~~-----~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~ 106 (532)
.++++|. .|.|+||++.|.+. +.....-+++.++..+++ .++|++|+|.+++... .++|+|+++|+|.
T Consensus 22 ~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~ 95 (236)
T cd06435 22 AALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPL----PGAKAGALNYALERTA--PDAEIIAVIDADY 95 (236)
T ss_pred HhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCC
Confidence 4566665 58889999877542 222111145777766543 3679999999999732 3589999999999
Q ss_pred CCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhh----HHhHHHHHhhhhccCCceeecccceeehHh
Q 009524 107 YSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL----RIYNEVEFEGMDGYGGPIYCGSGCFHRREI 182 (532)
Q Consensus 107 ~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~----~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~a 182 (532)
.+ +|++|.+++..|.++ ++++|+++..+.+...+ .+.... ...+..........+.....|+++++||++
T Consensus 96 ~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~ 169 (236)
T cd06435 96 QV-EPDWLKRLVPIFDDP----RVGFVQAPQDYRDGEES-LFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSA 169 (236)
T ss_pred Cc-CHHHHHHHHHHhcCC----CeeEEecCccccCCCcc-HHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHH
Confidence 99 799999999998765 79999988765543221 121111 111111122223333445789999999999
Q ss_pred hccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecC
Q 009524 183 LCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKP 262 (532)
Q Consensus 183 L~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~ 262 (532)
+.+ +| ||+.+...||+++++|++.+||+..|++
T Consensus 170 ~~~--------------iG--------------------------------gf~~~~~~eD~dl~~r~~~~G~~~~~~~- 202 (236)
T cd06435 170 LDD--------------VG--------------------------------GWDEWCITEDSELGLRMHEAGYIGVYVA- 202 (236)
T ss_pred HHH--------------hC--------------------------------CCCCccccchHHHHHHHHHCCcEEEEcc-
Confidence 998 54 7777778999999999999999999984
Q ss_pred CcccccccCCCCHHHHHHHHHHhcccchhhHHhh
Q 009524 263 ERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 296 (532)
Q Consensus 263 ~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~ 296 (532)
.. ..+...|+|+.++++||+||++|.+|++.++
T Consensus 203 ~~-~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~~ 235 (236)
T cd06435 203 QS-YGHGLIPDTFEAFKKQRFRWAYGAVQILKKH 235 (236)
T ss_pred hh-hccCcCcccHHHHHHHHHHHhcchhhhhhcc
Confidence 43 4478999999999999999999999998653
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.90 E-value=8.5e-23 Score=201.87 Aligned_cols=203 Identities=21% Similarity=0.309 Sum_probs=150.0
Q ss_pred CCCCCCC---EEEEEeCCCChhHHhhhcc----CCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCC
Q 009524 33 SRLDHDT---ILQILIDGRDPNAVDNEGC----ALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCD 105 (532)
Q Consensus 33 ~~~dhp~---~v~Vldd~~~~~~~~~~~~----~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD 105 (532)
.+++||+ .|.|+||+++|++.+.... ....++++.+.+ ..+|++|+|.+++. +++|+|+++|+|
T Consensus 24 ~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD 94 (241)
T cd06427 24 SALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAE 94 (241)
T ss_pred HhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCC
Confidence 4567764 4777888888776443221 112344433322 25899999999998 789999999999
Q ss_pred CCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccc---cchhhHHhHHHHHhhhhccCCce-eecccceeehH
Q 009524 106 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL---YSNSLRIYNEVEFEGMDGYGGPI-YCGSGCFHRRE 181 (532)
Q Consensus 106 ~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~---~~~~~~~~~~~~~~g~d~~~~~~-~~Gtg~~~RR~ 181 (532)
+.+ +|+++.+++.+|.+. +++++++|++..+.+...+.. +.......++...++....+.+. +.|+++++||+
T Consensus 95 ~~~-~~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~ 171 (241)
T cd06427 95 DAP-DPDQLKKAVAAFARL--DDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTD 171 (241)
T ss_pred CCC-ChHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHH
Confidence 999 799999999998632 137999999887776433211 11112223344455565555554 57899999999
Q ss_pred hhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 182 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
++++ +| ||+....+||+++++|++.+||+..+++
T Consensus 172 ~~~~--------------vg--------------------------------g~~~~~~~eD~~l~~rl~~~G~r~~~~~ 205 (241)
T cd06427 172 VLRE--------------LG--------------------------------GWDPFNVTEDADLGLRLARAGYRTGVLN 205 (241)
T ss_pred HHHH--------------cC--------------------------------CCCcccchhhHHHHHHHHHCCceEEEec
Confidence 9988 54 7777778999999999999999999994
Q ss_pred CCcccccccCCCCHHHHHHHHHHhcccchhhHHhh
Q 009524 262 PERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 296 (532)
Q Consensus 262 ~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~ 296 (532)
. ...++.|+|++++++||.||++|.+|++..+
T Consensus 206 -~--~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~~ 237 (241)
T cd06427 206 -S--TTLEEANNALGNWIRQRSRWIKGYMQTWLVH 237 (241)
T ss_pred -c--cccccCcHhHHHHHHHHHHHhccHHHHHHHH
Confidence 3 3468999999999999999999999999653
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.88 E-value=2.2e-23 Score=202.99 Aligned_cols=194 Identities=25% Similarity=0.345 Sum_probs=121.6
Q ss_pred CCCCCC-EEEEEeCCCChhHHh---hhccCCCc--EEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC
Q 009524 34 RLDHDT-ILQILIDGRDPNAVD---NEGCALPT--LVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY 107 (532)
Q Consensus 34 ~~dhp~-~v~Vldd~~~~~~~~---~~~~~~p~--l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~ 107 (532)
+++||. .|.|+||++++++.+ +...++|. +.++.++++++ .++|++|+|.+++. .++|+|+++|+|.+
T Consensus 25 ~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~ 98 (228)
T PF13641_consen 25 AQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTV 98 (228)
T ss_dssp TSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEE
T ss_pred cCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcE
Confidence 445554 488889888776422 22224554 57887765432 14799999999998 67999999999999
Q ss_pred CCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHH----HHHhhhhccCCceeecccceeehHhh
Q 009524 108 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNE----VEFEGMDGYGGPIYCGSGCFHRREIL 183 (532)
Q Consensus 108 ~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~----~~~~g~d~~~~~~~~Gtg~~~RR~aL 183 (532)
+ +|++|++++.+|.+| ++++||++..+.+ .++ .+......++. ....+....+..+++|+++++||+++
T Consensus 99 ~-~p~~l~~~~~~~~~~----~~~~v~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~ 171 (228)
T PF13641_consen 99 L-DPDWLERLLAAFADP----GVGAVGGPVFPDN-DRN-WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSAL 171 (228)
T ss_dssp E--CHHHHHHHHHHHBS----S--EEEEEEEETT-CCC-EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHH
T ss_pred E-CHHHHHHHHHHHHhC----CCCeEeeeEeecC-CCC-HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHH
Confidence 9 799999999999776 7999998876554 222 22222222211 12233344455667899999999999
Q ss_pred ccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCC
Q 009524 184 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 263 (532)
Q Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~ 263 (532)
.+ +| ||+.....||.+++.+++.+||++.|+ |.
T Consensus 172 ~~--------------~g--------------------------------~fd~~~~~eD~~l~~r~~~~G~~~~~~-~~ 204 (228)
T PF13641_consen 172 EE--------------VG--------------------------------GFDPFILGEDFDLCLRLRAAGWRIVYA-PD 204 (228)
T ss_dssp HH--------------H---------------------------------S--SSSSSHHHHHHHHHHHTT--EEEE-EE
T ss_pred HH--------------hC--------------------------------CCCCCCcccHHHHHHHHHHCCCcEEEE-CC
Confidence 87 54 777778899999999999999999998 43
Q ss_pred cccccccCCCCHHHHHHHHHHhccc
Q 009524 264 RDAFLGVSPTTLLQFLVQRKRWSEG 288 (532)
Q Consensus 264 ~~a~~g~aP~tl~~~l~Qr~RWa~G 288 (532)
+.++...|.|++++++||.||++|
T Consensus 205 -~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 205 -ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp -EEEEE--SSSTHHHHHHHHHHH--
T ss_pred -cEEEEeCCCCHHHHHHHHhccCcC
Confidence 356899999999999999999987
No 26
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.87 E-value=9e-21 Score=211.76 Aligned_cols=211 Identities=15% Similarity=0.113 Sum_probs=148.6
Q ss_pred CCCCCCCE-EEEE---eCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHc---ccCCCCc--EEEEec
Q 009524 33 SRLDHDTI-LQIL---IDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVS---SKISNGQ--VTLNVD 103 (532)
Q Consensus 33 ~~~dhp~~-v~Vl---dd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s---~~~s~~~--~IlvlD 103 (532)
.+.|||.. |.|. ||+...+..+....++|+++.|..++. ...+||.|||++++.. .....++ .|+++|
T Consensus 95 ~~ldYp~~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~D 171 (703)
T PRK15489 95 ATLDYRRYVIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHD 171 (703)
T ss_pred hcCCCCCeEEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEc
Confidence 46799976 5552 555433334445556788887776442 2368999999999862 1112333 499999
Q ss_pred CCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCccc----ccchhhHHhHHHHHhhhhccCCce-eeccccee
Q 009524 104 CDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNE----LYSNSLRIYNEVEFEGMDGYGGPI-YCGSGCFH 178 (532)
Q Consensus 104 aD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd----~~~~~~~~~~~~~~~g~d~~~~~~-~~Gtg~~~ 178 (532)
||.++ +|++|+.+ .++.++ -.+||.|..-...+.+. .|..++...++..++++..+++++ ..|||++|
T Consensus 172 AEd~~-~P~~L~~~-~~~~~~-----~~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~f 244 (703)
T PRK15489 172 SEDVL-HPLELKYF-NYLLPR-----KDLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCF 244 (703)
T ss_pred CCCCC-ChhHHHHH-HhhcCC-----cceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceee
Confidence 99999 89999864 666543 14699874311111112 234455566677788999888875 69999999
Q ss_pred ehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEE
Q 009524 179 RREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSV 258 (532)
Q Consensus 179 RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~ 258 (532)
||++|..+.. .|| | -+|+.+|+|||+++|+||+.+|||+.
T Consensus 245 rr~aL~~l~~-----------~gg--------------------------~---~~~n~~sLTED~Dlg~RL~~~G~r~~ 284 (703)
T PRK15489 245 SRRALLALMK-----------ERG--------------------------N---QPFNTSSLTEDYDFSFRLAELGMQEI 284 (703)
T ss_pred eHHHHHHHHH-----------hcC--------------------------C---CCCCCCCchHhHHHHHHHHHCCCceE
Confidence 9999875200 121 0 16888999999999999999999999
Q ss_pred EecC---------------------CcccccccCCCCHHHHHHHHHHhcccch-hhH
Q 009524 259 YCKP---------------------ERDAFLGVSPTTLLQFLVQRKRWSEGDF-QIM 293 (532)
Q Consensus 259 y~~~---------------------~~~a~~g~aP~tl~~~l~Qr~RWa~G~l-qi~ 293 (532)
|+.- ...+.++..|.|+.+.++||.||..|-. |-.
T Consensus 285 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 285 FVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred EEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 9321 1246789999999999999999999988 664
No 27
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=4.6e-19 Score=185.91 Aligned_cols=246 Identities=15% Similarity=0.176 Sum_probs=185.2
Q ss_pred CCCCCCCEEEEEeCCCChhHH-----------hhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEE
Q 009524 33 SRLDHDTILQILIDGRDPNAV-----------DNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLN 101 (532)
Q Consensus 33 ~~~dhp~~v~Vldd~~~~~~~-----------~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~Ilv 101 (532)
+.+-|-..+.|+.|++|++.. ++.+ ..-++.|-.|.+ |.+.||||+....|..+ +.+++++|
T Consensus 174 Tg~~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~-g~~~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlV 246 (736)
T COG2943 174 TGHAEHFDFFVLSDSRDPDIALAEQKAWAELCRELG-GEGNIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLV 246 (736)
T ss_pred hCCcccceEEEEcCCCCchhhhhHHHHHHHHHHHhC-CCCceeeehHhh----hhcccccCHHHHHHHhC--cccceEEE
Confidence 344556779999999998741 1111 235666666655 45789999999999876 88999999
Q ss_pred ecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHH---hHH-HHHhhhhccCC--ceeecc
Q 009524 102 VDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRI---YNE-VEFEGMDGYGG--PIYCGS 174 (532)
Q Consensus 102 lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~---~~~-~~~~g~d~~~~--~~~~Gt 174 (532)
+|||+++ .+|.+.+++..|+ || +.|.+|+-..-.|. ..+|+..|.. .|. +...|...|++ ..|-|.
T Consensus 247 LDADSvM-tgd~lvrLv~~ME~~P----~aGlIQt~P~~~gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGH 319 (736)
T COG2943 247 LDADSVM-TGDCLVRLVRLMEANP----DAGLIQTSPKASGG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGH 319 (736)
T ss_pred eeccccc-CchHHHHHHHHHhhCC----CCceeecchhhcCc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccc
Confidence 9999999 6999999999997 55 79999997665553 3466654432 333 45678887765 469999
Q ss_pred cceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcC
Q 009524 175 GCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQG 254 (532)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~G 254 (532)
|+++|.+++.+.+..+.. .| . +-|-.+.++.|+..+-.|.+.|
T Consensus 320 NAIIRt~aF~~hcgLp~L-------pG------------------------~------~pFgG~ilSHDfvEAALmRRaG 362 (736)
T COG2943 320 NAIIRTKAFIEHCGLPPL-------PG------------------------R------GPFGGHILSHDFVEAALMRRAG 362 (736)
T ss_pred cceeechhhHHhcCCCCC-------CC------------------------C------CCCCccccchHHHHHHHHhhcC
Confidence 999999999875433222 22 1 2344457899999999999999
Q ss_pred CEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccchhhHHHHHHHHHH
Q 009524 255 WKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIV 334 (532)
Q Consensus 255 wrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~ 334 (532)
|-+--. ++....++|.|.|+.|.++..+|||+|++|.+ ++ ++.+++.+..|+.++.+.+.|+++...++++++
T Consensus 363 W~v~ia-~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~-----rl-~~~~GlHwvsR~h~~tGVmsYlsaPlWfl~ll~ 435 (736)
T COG2943 363 WGVWIA-YDLDGSYEELPPNLLDELKRDRRWCHGNLQHF-----RL-FLVKGLHWVSRAHFLTGVMSYLSAPLWFLFLLL 435 (736)
T ss_pred ceEEEe-ccCCCchhhCCchHHHHHhhhhHhhhcchhhc-----ee-eccCCccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 986443 56678899999999999999999999999987 23 345789999999999888888777666555444
Q ss_pred hH
Q 009524 335 PS 336 (532)
Q Consensus 335 P~ 336 (532)
-.
T Consensus 436 g~ 437 (736)
T COG2943 436 GT 437 (736)
T ss_pred HH
Confidence 33
No 28
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.84 E-value=3.2e-19 Score=188.46 Aligned_cols=198 Identities=16% Similarity=0.153 Sum_probs=139.0
Q ss_pred CCCCCCCCE-EEEEeCCCChhHHh---hhccCCCc--EEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCC
Q 009524 32 SSRLDHDTI-LQILIDGRDPNAVD---NEGCALPT--LVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCD 105 (532)
Q Consensus 32 ~~~~dhp~~-v~Vldd~~~~~~~~---~~~~~~p~--l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD 105 (532)
...||||+. |.|+||+++|.+.+ ....+.|+ ++++..+++++ .++|++|+|.+++. +++|+++++|||
T Consensus 63 l~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD 136 (373)
T TIGR03472 63 FCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSD 136 (373)
T ss_pred HHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCC
Confidence 568899974 77778888776432 23334564 67775544332 35799999999887 899999999999
Q ss_pred CCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHH-HHHhh---hhccCC-ceeecccceeeh
Q 009524 106 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNE-VEFEG---MDGYGG-PIYCGSGCFHRR 180 (532)
Q Consensus 106 ~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~-~~~~g---~d~~~~-~~~~Gtg~~~RR 180 (532)
.++ +||+|++++..|.|| +++.|+++....+ .+..+......+.. ...++ .+..+. .++.|++.++||
T Consensus 137 ~~~-~p~~L~~lv~~~~~~----~v~~V~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~RR 209 (373)
T TIGR03472 137 ISV-GPDYLRQVVAPLADP----DVGLVTCLYRGRP--VPGFWSRLGAMGINHNFLPSVMVARALGRARFCFGATMALRR 209 (373)
T ss_pred CCc-ChhHHHHHHHHhcCC----CcceEeccccCCC--CCCHHHHHHHHHhhhhhhHHHHHHHhccCCccccChhhheeH
Confidence 999 799999999999887 7999998643222 11111111111110 01111 112222 346799999999
Q ss_pred HhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCC--CCCCChHHHHHHHHHcCCEEE
Q 009524 181 EILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITGISIQCQGWKSV 258 (532)
Q Consensus 181 ~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gwrs~ 258 (532)
+++++ +| ||+. ++++||++++.+++.+||++.
T Consensus 210 ~~l~~--------------iG--------------------------------Gf~~~~~~~~ED~~l~~~i~~~G~~v~ 243 (373)
T TIGR03472 210 ATLEA--------------IG--------------------------------GLAALAHHLADDYWLGELVRALGLRVV 243 (373)
T ss_pred HHHHH--------------cC--------------------------------ChHHhcccchHHHHHHHHHHHcCCeEE
Confidence 99998 76 4432 467899999999999999999
Q ss_pred EecCCcccccccCCCCHHHHHHHHHHhcccch
Q 009524 259 YCKPERDAFLGVSPTTLLQFLVQRKRWSEGDF 290 (532)
Q Consensus 259 y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~l 290 (532)
|++ . .......|+|++++++||.||++..-
T Consensus 244 ~~~-~-~v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 244 LAP-V-VVDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred ecc-h-hhhcCCCccCHHHHHHHHHHHHhhhh
Confidence 984 3 34467788999999999999985543
No 29
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.84 E-value=1.1e-20 Score=188.05 Aligned_cols=172 Identities=19% Similarity=0.085 Sum_probs=114.4
Q ss_pred HHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHHhHH---
Q 009524 82 AMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNE--- 157 (532)
Q Consensus 82 ALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~--- 157 (532)
++|.++.. +++|+|+++|||+++ +|++|++++.+|. || ++|.|++.+...|...+ .....+...|.
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~-~~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~~~-~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKF-DPDSIVQLYKAMDKDP----EIGGVCGEIHPMGKKQG-PLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcC-CHhHHHHHHHHHHhCC----CEEEEEeeeEEcCCcch-hHHHhHheehhhhh
Confidence 34555443 789999999999999 7999999999884 66 79999998777664322 22222222221
Q ss_pred H-HHhhhhccCC-ceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCcccccccc
Q 009524 158 V-EFEGMDGYGG-PIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGL 235 (532)
Q Consensus 158 ~-~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~ 235 (532)
. .....+.++. ..+.|++++||++++++ .++... .+..+.|..++... ..+.
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~--------------~~~~~~-----------~~~~~~~~~~~~~~-~~~~ 187 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKG--------------DNGGKG-----------PLLDYAYLTNTVDS-LHKK 187 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcC--------------Cccccc-----------cchhhccccCcccc-hHHH
Confidence 1 1122333443 34689999999999988 321100 00000110011000 0122
Q ss_pred CCCCCCChHHHHHHHHHcCCEEEE--ecCCcccccccCCCCHHHHHHHHHHhcccchh
Q 009524 236 KYGCPVEDVITGISIQCQGWKSVY--CKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQ 291 (532)
Q Consensus 236 ~~~svtED~~t~~~l~~~Gwrs~y--~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lq 291 (532)
...+++||.+++++|..+||++.| + |+ +.+++++|+|+.++++||+||++|++.
T Consensus 188 ~~~~~~ED~~l~~~l~~~G~~~~~~~~-~~-a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 188 NNLDLGEDRILCTLLLKAGPKRKYLYV-PG-AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred HHHhHhcccceeHHHhccCCccEEEEe-cc-cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 335689999999999999999999 6 44 355899999999999999999999863
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.83 E-value=1.1e-19 Score=175.74 Aligned_cols=196 Identities=20% Similarity=0.194 Sum_probs=140.6
Q ss_pred CCCCCCC---EEEEEeCCCChhHHhhh----ccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCC
Q 009524 33 SRLDHDT---ILQILIDGRDPNAVDNE----GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCD 105 (532)
Q Consensus 33 ~~~dhp~---~v~Vldd~~~~~~~~~~----~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD 105 (532)
..|+||+ .|.|+||++++.+.+.. ....+++.++.++. + ...+|+.|+|.+++. +++|+|+++|+|
T Consensus 20 ~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~-~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D 92 (229)
T cd04192 20 SALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSR-V--SISGKKNALTTAIKA----AKGDWIVTTDAD 92 (229)
T ss_pred HhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccC-c--ccchhHHHHHHHHHH----hcCCEEEEECCC
Confidence 4566776 58899999987654322 22346777776654 2 236899999999998 789999999999
Q ss_pred CCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHh---HHHHHhhhhccCCc-eeecccceeehH
Q 009524 106 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIY---NEVEFEGMDGYGGP-IYCGSGCFHRRE 181 (532)
Q Consensus 106 ~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~---~~~~~~g~d~~~~~-~~~Gtg~~~RR~ 181 (532)
+++ +|++|++++..+.++ ..+.|+.+..+... +.......... ......+...++.+ ...|+++++||+
T Consensus 93 ~~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~ 165 (229)
T cd04192 93 CVV-PSNWLLTFVAFIQKE----QIGLVAGPVIYFKG--KSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKE 165 (229)
T ss_pred ccc-CHHHHHHHHHHhhcC----CCcEEeeeeeecCC--ccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHH
Confidence 999 799999999988765 46778887765521 11111111111 11122223334444 457889999999
Q ss_pred hhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCC--CCCCChHHHHHHHHHcCC-EEE
Q 009524 182 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITGISIQCQGW-KSV 258 (532)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gw-rs~ 258 (532)
++.+ +| ||++ ...+||.++.++++.+|| ++.
T Consensus 166 ~~~~--------------~g--------------------------------gf~~~~~~~~eD~~~~~~~~~~g~~~~~ 199 (229)
T cd04192 166 AFFE--------------VG--------------------------------GFEGNDHIASGDDELLLAKVASKYPKVA 199 (229)
T ss_pred HHHH--------------hc--------------------------------CCccccccccCCHHHHHHHHHhCCCCEE
Confidence 9998 65 6653 457899999999999999 988
Q ss_pred EecCCcccccccCCCCHHHHHHHHHHhccc
Q 009524 259 YCKPERDAFLGVSPTTLLQFLVQRKRWSEG 288 (532)
Q Consensus 259 y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G 288 (532)
|+..+....+...|.++.++++||+||++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 200 YLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred EeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 874333455799999999999999999988
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.82 E-value=3.8e-19 Score=173.64 Aligned_cols=200 Identities=22% Similarity=0.201 Sum_probs=138.7
Q ss_pred CCEEEEEeCCCChhHHhhh--ccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHH
Q 009524 38 DTILQILIDGRDPNAVDNE--GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVR 115 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~--~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~ 115 (532)
|..|.|+||++++++.+.. ....+.++++. ++ +.+|++|+|.+++. +++|+|+++|+|..+ +|++|+
T Consensus 28 ~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~-~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~-~~~~l~ 96 (235)
T cd06434 28 PLEIIVVTDGDDEPYLSILSQTVKYGGIFVIT-VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVW-PPNALP 96 (235)
T ss_pred CCEEEEEeCCCChHHHHHHHhhccCCcEEEEe-cC-----CCChHHHHHHHHHH----hCCCEEEEECCCcee-ChhHHH
Confidence 7789999999988764432 22345555554 32 35899999999998 789999999999999 799999
Q ss_pred HHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHH----HHHhhhhccCC-ceeecccceeehHhhccCCCCh
Q 009524 116 DALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNE----VEFEGMDGYGG-PIYCGSGCFHRREILCGRKYDK 190 (532)
Q Consensus 116 ~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~----~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~ 190 (532)
+++..|.|+ +++.|++.+...+.+.+ .+......++. .........++ ..+.|.+.++||+++++.....
T Consensus 97 ~l~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~ 171 (235)
T cd06434 97 EMLKPFEDP----KVGGVGTNQRILRPRDS-KWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLE 171 (235)
T ss_pred HHHHhccCC----CEeEEcCceEeecCccc-HHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHH
Confidence 999999876 79999988877765321 11111111111 11122233333 2357888899999998732111
Q ss_pred hhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCCccccccc
Q 009524 191 ETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGV 270 (532)
Q Consensus 191 ~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~ 270 (532)
....+ ++ +|+. ....||.+++.+++.+||+..|+.. . ..+..
T Consensus 172 ~~~~~---------------------------------~~--~~~~-~~~~eD~~l~~~~~~~g~~~~~~~~-~-~~~~~ 213 (235)
T cd06434 172 EFTNE---------------------------------TF--MGRR-LNAGDDRFLTRYVLSHGYKTVYQYT-S-EAYTE 213 (235)
T ss_pred Hhhhh---------------------------------hh--cCCC-CCcCchHHHHHHHHHCCCeEEEecC-C-eEEEE
Confidence 10000 00 1222 3578999999999999999999854 3 33677
Q ss_pred CCCCHHHHHHHHHHhcccchh
Q 009524 271 SPTTLLQFLVQRKRWSEGDFQ 291 (532)
Q Consensus 271 aP~tl~~~l~Qr~RWa~G~lq 291 (532)
.|.++.++++||+||++|..+
T Consensus 214 ~~~~~~~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 214 TPENYKKFLKQQLRWSRSNWR 234 (235)
T ss_pred cchhHHHHHHHhhhhhhcccC
Confidence 999999999999999999753
No 32
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.81 E-value=2e-19 Score=172.25 Aligned_cols=164 Identities=19% Similarity=0.198 Sum_probs=127.4
Q ss_pred CCCCCCC-EEEEEeCCCChhHHh---hhccCCCc--EEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC
Q 009524 33 SRLDHDT-ILQILIDGRDPNAVD---NEGCALPT--LVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 33 ~~~dhp~-~v~Vldd~~~~~~~~---~~~~~~p~--l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~ 106 (532)
..|+||+ .|.|+||+++|++.+ ....+.|+ +.++..+++.+ ..+|++|+|.+++. +++|+++++|+|+
T Consensus 24 ~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~ 97 (196)
T cd02520 24 FQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDI 97 (196)
T ss_pred HhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCc
Confidence 4566676 477889998876533 22234564 44555544222 24689999999998 7899999999999
Q ss_pred CCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccC
Q 009524 107 YSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGR 186 (532)
Q Consensus 107 ~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 186 (532)
.+ +|++|.+++..+.++ ++++|++. +..|+++++||+++++
T Consensus 98 ~~-~~~~l~~l~~~~~~~----~~~~v~~~---------------------------------~~~g~~~~~r~~~~~~- 138 (196)
T cd02520 98 SV-PPDYLRRMVAPLMDP----GVGLVTCL---------------------------------CAFGKSMALRREVLDA- 138 (196)
T ss_pred eE-ChhHHHHHHHHhhCC----CCCeEEee---------------------------------cccCceeeeEHHHHHh-
Confidence 99 799999999988776 57888653 4678999999999998
Q ss_pred CCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCC--CCCCChHHHHHHHHHcCCEEEEecCCc
Q 009524 187 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITGISIQCQGWKSVYCKPER 264 (532)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~ 264 (532)
+|| |+. ..+.||+++++++..+||++.|+ |.
T Consensus 139 -------------~gg--------------------------------f~~~~~~~~eD~~l~~rl~~~G~~i~~~-~~- 171 (196)
T cd02520 139 -------------IGG--------------------------------FEAFADYLAEDYFLGKLIWRLGYRVVLS-PY- 171 (196)
T ss_pred -------------ccC--------------------------------hHHHhHHHHHHHHHHHHHHHcCCeEEEc-ch-
Confidence 654 332 24689999999999999999998 44
Q ss_pred ccccccCCCCHHHHHHHHHHhccc
Q 009524 265 DAFLGVSPTTLLQFLVQRKRWSEG 288 (532)
Q Consensus 265 ~a~~g~aP~tl~~~l~Qr~RWa~G 288 (532)
+.++.+.|.+++++++||.||++.
T Consensus 172 ~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 172 VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred heeccCCcccHHHHHHHHHHHhcc
Confidence 356789999999999999999863
No 33
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.78 E-value=1.1e-18 Score=166.35 Aligned_cols=137 Identities=25% Similarity=0.354 Sum_probs=110.8
Q ss_pred EEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHH----HHhhhhccCCc-eee
Q 009524 98 VTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEV----EFEGMDGYGGP-IYC 172 (532)
Q Consensus 98 ~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~----~~~g~d~~~~~-~~~ 172 (532)
+|+++|||+.+ +||++++++.++.|| ++++||+|..+.|. ++...+.+...+.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~-~~d~l~~~~~~~~~~----~~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRL-PPDFLERLVAALEDP----KVDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCC-ChHHHHHHHHHHhCC----CceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 58999999999 799999999999876 79999999998642 33444444444421 12333444443 578
Q ss_pred cccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccC-CCCCCChHHHHHHHH
Q 009524 173 GSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLK-YGCPVEDVITGISIQ 251 (532)
Q Consensus 173 Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~-~~svtED~~t~~~l~ 251 (532)
|+|.++||+++++ +| ||+ ..+++||.++++++.
T Consensus 74 G~~~~~r~~~l~~--------------vg--------------------------------~~~~~~~~~ED~~l~~~l~ 107 (193)
T PF13632_consen 74 GSGMLFRREALRE--------------VG--------------------------------GFDDPFSIGEDMDLGFRLR 107 (193)
T ss_pred CcceeeeHHHHHH--------------hC--------------------------------cccccccccchHHHHHHHH
Confidence 9999999999998 54 787 889999999999999
Q ss_pred HcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccc
Q 009524 252 CQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGD 289 (532)
Q Consensus 252 ~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~ 289 (532)
.+||++.|++ +. .+++++|+|+.++++||+||..|.
T Consensus 108 ~~G~~~~~~~-~~-~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 108 RAGYRIVYVP-DA-IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred HCCCEEEEec-cc-ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999994 32 468999999999999999999998
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.73 E-value=9.1e-17 Score=158.81 Aligned_cols=192 Identities=18% Similarity=0.155 Sum_probs=133.6
Q ss_pred CCCCCC---EEEEEeCCCChhHHhhhccCCC--cEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCC
Q 009524 34 RLDHDT---ILQILIDGRDPNAVDNEGCALP--TLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYS 108 (532)
Q Consensus 34 ~~dhp~---~v~Vldd~~~~~~~~~~~~~~p--~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~ 108 (532)
.|++|. .|.|+||+++|++.+...+ +. ++.++..++ ..+|++|+|.+++. +++|+|+++|+|.++
T Consensus 53 ~q~~~~~~~eiivvdd~s~d~t~~~~~~-~~~~~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~ 122 (251)
T cd06439 53 ALDYPRDRLEIIVVSDGSTDGTAEIARE-YADKGVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALL 122 (251)
T ss_pred hCcCCCCcEEEEEEECCCCccHHHHHHH-HhhCcEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCc
Confidence 345554 6889999998876442221 11 466665543 25799999999998 778999999999999
Q ss_pred CchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhh-HHhHHHHHhhhhccCC-ceeecccceeehHhhccC
Q 009524 109 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL-RIYNEVEFEGMDGYGG-PIYCGSGCFHRREILCGR 186 (532)
Q Consensus 109 ~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~-~~~~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~ 186 (532)
+|+++.+++..+.++ ++++|++.....+.+. ....... ..+...........+. ....|++.++||+++.+
T Consensus 123 -~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~- 195 (251)
T cd06439 123 -DPDALRLLVRHFADP----SVGAVSGELVIVDGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFRP- 195 (251)
T ss_pred -CHHHHHHHHHHhcCC----CccEEEeEEEecCCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhcC-
Confidence 699999999999765 6888887665544321 0001111 1111111111112222 23456666789988863
Q ss_pred CCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCCccc
Q 009524 187 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDA 266 (532)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a 266 (532)
|+.....||.+++.++..+||++.|++. +.
T Consensus 196 ------------------------------------------------~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~ 225 (251)
T cd06439 196 ------------------------------------------------LPADTINDDFVLPLRIARQGYRVVYEPD--AV 225 (251)
T ss_pred ------------------------------------------------CCcccchhHHHHHHHHHHcCCeEEeccc--cE
Confidence 3334567999999999999999999844 34
Q ss_pred ccccCCCCHHHHHHHHHHhcccchhh
Q 009524 267 FLGVSPTTLLQFLVQRKRWSEGDFQI 292 (532)
Q Consensus 267 ~~g~aP~tl~~~l~Qr~RWa~G~lqi 292 (532)
.+...|.+..++++|+.||++|.+|.
T Consensus 226 ~~~~~~~~~~~~~~~~~r~~~g~~~~ 251 (251)
T cd06439 226 AYEEVAEDGSEEFRRRVRIAAGNLQA 251 (251)
T ss_pred EEEeCcccHHHHHHHHHHHHhccccC
Confidence 57999999999999999999999883
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.67 E-value=1.3e-15 Score=149.31 Aligned_cols=191 Identities=14% Similarity=0.119 Sum_probs=132.0
Q ss_pred CEEEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHH
Q 009524 39 TILQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVR 115 (532)
Q Consensus 39 ~~v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~ 115 (532)
..|.|+||++++++.+ ....+.|.+.++..++ +++++|+|.+++. +++|+++++|+|..+ +|++|.
T Consensus 32 ~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~------~~~~~a~N~g~~~----a~~d~v~~lD~D~~~-~~~~l~ 100 (249)
T cd02525 32 IEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK------RIQSAGLNIGIRN----SRGDIIIRVDAHAVY-PKDYIL 100 (249)
T ss_pred cEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC------CCchHHHHHHHHH----hCCCEEEEECCCccC-CHHHHH
Confidence 4688899999876533 2333457777776432 4689999999998 789999999999999 799999
Q ss_pred HHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHH-HHHhh---hhccC---CceeecccceeehHhhccCCC
Q 009524 116 DALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNE-VEFEG---MDGYG---GPIYCGSGCFHRREILCGRKY 188 (532)
Q Consensus 116 ~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~-~~~~g---~d~~~---~~~~~Gtg~~~RR~aL~~~~~ 188 (532)
+++..+.++ ....|+++....+. +.+.......+. ....+ ..... .....|.+.++||+++.+
T Consensus 101 ~~~~~~~~~----~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 170 (249)
T cd02525 101 ELVEALKRT----GADNVGGPMETIGE---SKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEK--- 170 (249)
T ss_pred HHHHHHhcC----CCCEEecceecCCC---ChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHH---
Confidence 999888775 34555554322211 111110000000 00000 01111 224678888999999987
Q ss_pred ChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC-CCCChHHHHHHHHHcCCEEEEecCCcccc
Q 009524 189 DKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKPERDAF 267 (532)
Q Consensus 189 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~a~ 267 (532)
+| ||+.. ...||.+++++++.+|+++.|++ .. ..
T Consensus 171 -----------~g--------------------------------~~~~~~~~~eD~~l~~r~~~~G~~~~~~~-~~-~~ 205 (249)
T cd02525 171 -----------VG--------------------------------GFDESLVRNEDAELNYRLRKAGYKIWLSP-DI-RV 205 (249)
T ss_pred -----------hC--------------------------------CCCcccCccchhHHHHHHHHcCcEEEEcC-Ce-EE
Confidence 44 34332 24799999999999999999984 43 34
Q ss_pred cccCCCCHHHHHHHHHHhcccchhhHHh
Q 009524 268 LGVSPTTLLQFLVQRKRWSEGDFQIMLC 295 (532)
Q Consensus 268 ~g~aP~tl~~~l~Qr~RWa~G~lqi~~~ 295 (532)
....|.+++.+++|+.||..|..|....
T Consensus 206 ~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 206 YYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred EEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 5778899999999999999999999865
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.67 E-value=7.2e-16 Score=147.43 Aligned_cols=140 Identities=19% Similarity=0.108 Sum_probs=103.2
Q ss_pred CCEEEEEeCCCChhHHhhhc--cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHccc-------CCCCcEEEEecCCCCC
Q 009524 38 DTILQILIDGRDPNAVDNEG--CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSK-------ISNGQVTLNVDCDMYS 108 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~--~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~-------~s~~~~IlvlDaD~~~ 108 (532)
+..|.|+||+++|++.+... ...+++.++.++... ...+|++|+|.+++.+.. ...+|+|+++|+|..+
T Consensus 25 ~~eIivvdd~S~D~t~~~~~~~~~~~~v~~i~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~ 102 (191)
T cd06436 25 NFLVLVIDDASDDDTAGIVRLAITDSRVHLLRRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRL 102 (191)
T ss_pred CeEEEEEECCCCcCHHHHHhheecCCcEEEEeccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCc
Confidence 34699999999987654332 234788888775321 235899999999997310 0135899999999999
Q ss_pred CchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccch----hhHHhHHHHHhhhhccCCceeecccceeehHhhc
Q 009524 109 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSN----SLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILC 184 (532)
Q Consensus 109 ~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~----~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 184 (532)
+|++|+++..+|.|| +++.||.+.+++|.+.+. +.. +....+..++.++...+...++|+|++|||++|.
T Consensus 103 -~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~ 176 (191)
T cd06436 103 -DPNALEAVAPYFSDP----RVAGTQSRVRMYNRHKNL-LTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALD 176 (191)
T ss_pred -CHhHHHHHHHhhcCC----ceEEEeeeEEEecCCCCH-HHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHH
Confidence 799999988888877 799999999888865442 222 2223334567777777766689999999999999
Q ss_pred c
Q 009524 185 G 185 (532)
Q Consensus 185 ~ 185 (532)
+
T Consensus 177 ~ 177 (191)
T cd06436 177 G 177 (191)
T ss_pred H
Confidence 8
No 37
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.66 E-value=1.5e-14 Score=153.68 Aligned_cols=201 Identities=12% Similarity=0.045 Sum_probs=131.1
Q ss_pred CCCCCCCC--EEEEEeCCCChhHHh---hhccCCC---cEEEEEeccCCCCCCCCcHHHHHHHHHHcccC-CCCcEEEEe
Q 009524 32 SSRLDHDT--ILQILIDGRDPNAVD---NEGCALP---TLVYLAREKRPQYSHNFKAGAMNALIRVSSKI-SNGQVTLNV 102 (532)
Q Consensus 32 ~~~~dhp~--~v~Vldd~~~~~~~~---~~~~~~p---~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~-s~~~~Ilvl 102 (532)
...||||. .|.|+||+++|++.+ ....+.| ++++++.+.+|. .-.+|+.|+|.+++.+... .++|+++.+
T Consensus 62 L~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llfl 140 (384)
T TIGR03469 62 LLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLT 140 (384)
T ss_pred HHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEE
Confidence 34678874 688999999887643 2222344 778776554443 2358999999999983111 118999999
Q ss_pred cCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchh----hHHhHHHHH---hhhhcc-CCceeecc
Q 009524 103 DCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNS----LRIYNEVEF---EGMDGY-GGPIYCGS 174 (532)
Q Consensus 103 DaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~----~~~~~~~~~---~g~d~~-~~~~~~Gt 174 (532)
|||..+ +|+.+++++..+.++ ++++|..+.++... ..+... ...++.... ...+.. ......|.
T Consensus 141 DaD~~~-~p~~l~~lv~~~~~~----~~~~vs~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 212 (384)
T TIGR03469 141 DADIAH-GPDNLARLVARARAE----GLDLVSLMVRLRCE---SFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGG 212 (384)
T ss_pred CCCCCC-ChhHHHHHHHHHHhC----CCCEEEecccccCC---CHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecce
Confidence 999999 799999999998865 34555543332211 111110 011111110 011111 11235789
Q ss_pred cceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcC
Q 009524 175 GCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQG 254 (532)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~G 254 (532)
+.++||+++++ +||++.. ...+.||++++.+++++|
T Consensus 213 ~~lirr~~~~~--------------vGGf~~~------------------------------~~~~~ED~~L~~r~~~~G 248 (384)
T TIGR03469 213 CILIRREALER--------------IGGIAAI------------------------------RGALIDDCTLAAAVKRSG 248 (384)
T ss_pred EEEEEHHHHHH--------------cCCHHHH------------------------------hhCcccHHHHHHHHHHcC
Confidence 99999999998 7754321 135789999999999999
Q ss_pred CEEEEecCCcccccccCCCCHHHHHHHHHHhc
Q 009524 255 WKSVYCKPERDAFLGVSPTTLLQFLVQRKRWS 286 (532)
Q Consensus 255 wrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa 286 (532)
+++.+.... .......-+++.+.++|+.||.
T Consensus 249 ~~v~~~~~~-~~~s~r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 249 GRIWLGLAA-RTRSLRPYDGLGEIWRMIARTA 279 (384)
T ss_pred CcEEEEecC-ceEEEEecCCHHHHHHHHHHhH
Confidence 999987543 2323344579999999999995
No 38
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.59 E-value=1.4e-14 Score=137.53 Aligned_cols=156 Identities=15% Similarity=0.154 Sum_probs=115.2
Q ss_pred CCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHh
Q 009524 76 HNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIY 155 (532)
Q Consensus 76 ~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~ 155 (532)
.+.|.+||..+++. . +++|++++.|+|..+ +|++|++++..+.|| ++++|.++....+.+ ...+.....+
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v-~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~--~~~~~l~~~~ 84 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRV-PPDYLRELVAPLADP----GVGLVTGLPRGVPAR--GFWSRLEAAF 84 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeE-CHHHHHHHHHHHhCC----CCcEEEecccccCCc--CHHHHHHHHH
Confidence 47899999999996 2 789999999999999 799999999999998 799998776655433 2111111112
Q ss_pred HHHHHhhhh-ccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccc
Q 009524 156 NEVEFEGMD-GYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIG 234 (532)
Q Consensus 156 ~~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G 234 (532)
+.....-.. .-+..+..|..+++||++|++ +||+..-
T Consensus 85 ~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~--------------~GG~~~l---------------------------- 122 (175)
T PF13506_consen 85 FNFLPGVLQALGGAPFAWGGSMAFRREALEE--------------IGGFEAL---------------------------- 122 (175)
T ss_pred HhHHHHHHHHhcCCCceecceeeeEHHHHHH--------------cccHHHH----------------------------
Confidence 211111111 224567899999999999998 7755421
Q ss_pred cCCCCCCChHHHHHHHHHcCCEEEEecCCcccccccCC----CCHHHHHHHHHHhcc
Q 009524 235 LKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSP----TTLLQFLVQRKRWSE 287 (532)
Q Consensus 235 ~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP----~tl~~~l~Qr~RWa~ 287 (532)
.+.++||+.+|-+++.+|||++.... ++.....| .++.++++++.||++
T Consensus 123 --~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 123 --ADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred --hhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 13689999999999999999998742 23345566 489999999999985
No 39
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.52 E-value=5.7e-14 Score=132.88 Aligned_cols=135 Identities=15% Similarity=0.100 Sum_probs=91.1
Q ss_pred CEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcc-cCCCCcEEEEecCCCCCCchHHHHHH
Q 009524 39 TILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSS-KISNGQVTLNVDCDMYSNNSQAVRDA 117 (532)
Q Consensus 39 ~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~-~~s~~~~IlvlDaD~~~~~p~~l~~~ 117 (532)
..|.|+||+++|++.+.... +. ..++.|.+. +..+|++|+|.+++... ..+++|+++++|+|+.+ +|+++.++
T Consensus 29 ~eiivvdd~s~D~t~~~~~~-~~-~~~~~~~~~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~-~p~~l~~l 102 (183)
T cd06438 29 YRIFVVADNCTDDTAQVARA-AG-ATVLERHDP---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLV-DPNALEEL 102 (183)
T ss_pred cEEEEEeCCCCchHHHHHHH-cC-CeEEEeCCC---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCC-ChhHHHHH
Confidence 35888999998876554321 22 223334321 24689999999998731 12469999999999999 69999999
Q ss_pred HHHhhcccCCCeEEEEeccceeecCCcccccchh----hHHhHHHHHhhhhccCCc-eeecccceeehHhhcc
Q 009524 118 LCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNS----LRIYNEVEFEGMDGYGGP-IYCGSGCFHRREILCG 185 (532)
Q Consensus 118 ~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~----~~~~~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~ 185 (532)
+..|.+. ...||+.....+.+.+. +... ....+.....++..+++. .+.|+|+++||+++++
T Consensus 103 ~~~~~~~-----~~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~ 169 (183)
T cd06438 103 NARFAAG-----ARVVQAYYNSKNPDDSW-ITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLRQ 169 (183)
T ss_pred HHHHhhC-----CCeeEEEEeeeCCccCH-HHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHHh
Confidence 9988753 35688776665543322 2221 222333445566667665 4799999999999986
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.38 E-value=7e-12 Score=119.40 Aligned_cols=162 Identities=14% Similarity=0.040 Sum_probs=111.0
Q ss_pred CCCCC-CEEEEEeCCC-ChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCC
Q 009524 34 RLDHD-TILQILIDGR-DPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYS 108 (532)
Q Consensus 34 ~~dhp-~~v~Vldd~~-~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~ 108 (532)
.|+++ ..|.|+||++ ++++.+ ....+.| +.++.++++ .++++|+|.|++. +++|+|+++|+|.++
T Consensus 24 ~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n-----~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~ 93 (201)
T cd04195 24 KQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKN-----RGLGKALNEGLKH----CTYDWVARMDTDDIS 93 (201)
T ss_pred hcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCcc-----ccHHHHHHHHHHh----cCCCEEEEeCCcccc
Confidence 34444 4578888887 444432 2222345 778877653 5899999999998 789999999999999
Q ss_pred CchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchh----hHHhHHHHHhhhhccCCceeecccceeehHhhc
Q 009524 109 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNS----LRIYNEVEFEGMDGYGGPIYCGSGCFHRREILC 184 (532)
Q Consensus 109 ~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~----~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 184 (532)
.|+++.+++..|.+. +++++|.+.....+.+........ ....... . .....+.|.++++||+++.
T Consensus 94 -~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~rr~~~~ 163 (201)
T cd04195 94 -LPDRFEKQLDFIEKN---PEIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILKF---A---RRRSPFNHPTVMFRKSKVL 163 (201)
T ss_pred -CcHHHHHHHHHHHhC---CCeEEEcccEEEECCCCCeeccccCCCCHHHHHHH---h---ccCCCCCChHHhhhHHHHH
Confidence 799999999998632 268888877655443321111110 0111111 1 1122356777899999998
Q ss_pred cCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 185 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
+ +| ||......||.++..++..+|+++.|++
T Consensus 164 ~--------------~g--------------------------------~~~~~~~~eD~~~~~r~~~~g~~~~~~~ 194 (201)
T cd04195 164 A--------------VG--------------------------------GYQDLPLVEDYALWARMLANGARFANLP 194 (201)
T ss_pred H--------------cC--------------------------------CcCCCCCchHHHHHHHHHHcCCceeccc
Confidence 7 54 6666678999999999999999999984
No 41
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.36 E-value=1.1e-11 Score=118.01 Aligned_cols=163 Identities=13% Similarity=0.043 Sum_probs=107.7
Q ss_pred CCCCCC-EEEEEeCCCChhHH----hhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCC
Q 009524 34 RLDHDT-ILQILIDGRDPNAV----DNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYS 108 (532)
Q Consensus 34 ~~dhp~-~v~Vldd~~~~~~~----~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~ 108 (532)
+|+++. .|.|+||++.++.. +......+.+.++..++ ..+++.|+|.+++. +.+||++++|+|.++
T Consensus 26 ~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~ 96 (202)
T cd04184 26 AQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREE-----NGGISAATNSALEL----ATGEFVALLDHDDEL 96 (202)
T ss_pred hCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcC
Confidence 455554 68899999976432 22122346677765543 25899999999998 789999999999999
Q ss_pred CchHHHHHHHHHh-hcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCC
Q 009524 109 NNSQAVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRK 187 (532)
Q Consensus 109 ~~p~~l~~~~~~f-~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~ 187 (532)
+|+++.+++..+ .++ ++++|.+.......+.. .........+. .+......+.|.++++||+++.+
T Consensus 97 -~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~r~~~~~-- 163 (202)
T cd04184 97 -APHALYEVVKALNEHP----DADLIYSDEDKIDEGGK-RSEPFFKPDWS-----PDLLLSQNYIGHLLVYRRSLVRQ-- 163 (202)
T ss_pred -ChHHHHHHHHHHHhCC----CCCEEEccHHhccCCCC-EeccccCCCCC-----HHHhhhcCCccceEeEEHHHHHH--
Confidence 799999999988 555 56777665443221110 00000000000 00111123567778999999987
Q ss_pred CChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC-CCCChHHHHHHHHHcCCEEEEecC
Q 009524 188 YDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKP 262 (532)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 262 (532)
+| ||+.+ ...||.++++|++.+||+.+|++.
T Consensus 164 ------------ig--------------------------------gf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 164 ------------VG--------------------------------GFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred ------------hC--------------------------------CCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 65 45443 247999999999999999999843
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.34 E-value=1.2e-11 Score=116.39 Aligned_cols=164 Identities=15% Similarity=0.043 Sum_probs=107.1
Q ss_pred CCCCC-CEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchH
Q 009524 34 RLDHD-TILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQ 112 (532)
Q Consensus 34 ~~dhp-~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~ 112 (532)
.|+++ ..|.|+||++++++.+....-....+++..+++ .++++|+|.|++. +++|+|+++|+|..+ .|+
T Consensus 22 ~q~~~~~evivvDd~s~d~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~~~~~----a~~~~v~~ld~D~~~-~~~ 91 (202)
T cd06433 22 SQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPD-----KGIYDAMNKGIAL----ATGDIIGFLNSDDTL-LPG 91 (202)
T ss_pred hCCCCCceEEEEeCCCCccHHHHHHHhHhhcEEEEecCC-----cCHHHHHHHHHHH----cCCCEEEEeCCCccc-Cch
Confidence 34455 358889999988764433211122344444432 5899999999998 789999999999999 799
Q ss_pred HHHHHHHHh-hcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChh
Q 009524 113 AVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKE 191 (532)
Q Consensus 113 ~l~~~~~~f-~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 191 (532)
.+.+.+..+ .++ +.++|.+...+.+.+........ ...............+|+++++||+++.+
T Consensus 92 ~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 156 (202)
T cd06433 92 ALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVIGRRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEK------ 156 (202)
T ss_pred HHHHHHHHHHhCC----CccEEEeeeEEEcCCCCcccCCC-----CcchhhhHHhhcCcccCcceEEEHHHHHH------
Confidence 999998544 454 56777766554443322111000 00011111122345678889999999987
Q ss_pred hHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC-CCCChHHHHHHHHHcCCEEEEecC
Q 009524 192 TKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKP 262 (532)
Q Consensus 192 ~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 262 (532)
+| ||+.+ ..+||.++.+++..+|++.++++.
T Consensus 157 --------~~--------------------------------~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 157 --------YG--------------------------------GFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred --------hC--------------------------------CCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 44 34332 357999999999999999988743
No 43
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.29 E-value=1.3e-11 Score=120.61 Aligned_cols=167 Identities=13% Similarity=-0.022 Sum_probs=102.8
Q ss_pred CCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHH
Q 009524 38 DTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDA 117 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~ 117 (532)
...|.|+||+++++........-+.+.++..+++ .++++|+|.+++.+.. .++|+++.+|+|..+ +|++|.++
T Consensus 24 ~~~iivvDn~s~~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~-~~~~l~~l 96 (237)
T cd02526 24 VDKVVVVDNSSGNDIELRLRLNSEKIELIHLGEN-----LGIAKALNIGIKAALE-NGADYVLLFDQDSVP-PPDMVEKL 96 (237)
T ss_pred CCEEEEEeCCCCccHHHHhhccCCcEEEEECCCc-----eehHHhhhHHHHHHHh-CCCCEEEEECCCCCc-CHhHHHHH
Confidence 3468889999887653332212367888877653 4699999999997311 156999999999999 79999998
Q ss_pred H---HHhhcccCCCeEEEEeccceeecCCcccccchhhHH-hHH-HHHhhhhccCCceeecccceeehHhhccCCCChhh
Q 009524 118 L---CFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRI-YNE-VEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKET 192 (532)
Q Consensus 118 ~---~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~-~~~-~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~ 192 (532)
+ ..+.+ ++.++.+ +|+................. ... ...............|+|+++||+++.+
T Consensus 97 ~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~------- 165 (237)
T cd02526 97 LAYKILSDK---NSNIGAV-GPRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEK------- 165 (237)
T ss_pred HHHHHhhcc---CCCeEEE-eeeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHH-------
Confidence 5 22221 1256655 44433321111100100000 000 0000111112234578899999999998
Q ss_pred HHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC--CChHHHHHHHHHcCCEEEEec
Q 009524 193 KIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP--VEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 193 ~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv--tED~~t~~~l~~~Gwrs~y~~ 261 (532)
+| ||+.... .||++.++|+..+||+..|++
T Consensus 166 -------~g--------------------------------gfd~~~~~~~eD~d~~~r~~~~G~~~~~~~ 197 (237)
T cd02526 166 -------VG--------------------------------GFDEDLFIDYVDTEWCLRARSKGYKIYVVP 197 (237)
T ss_pred -------hC--------------------------------CCCHHHcCccchHHHHHHHHHcCCcEEEEc
Confidence 65 3433222 589999999999999999984
No 44
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.29 E-value=6.5e-11 Score=121.07 Aligned_cols=161 Identities=17% Similarity=0.052 Sum_probs=105.4
Q ss_pred CEEEEEeCCCChhHHhhh-----ccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHH
Q 009524 39 TILQILIDGRDPNAVDNE-----GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQA 113 (532)
Q Consensus 39 ~~v~Vldd~~~~~~~~~~-----~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~ 113 (532)
..|.|+||+++|.+.+.. ....|.+.++..+++ .+++.|.|.|++. +.||+|+++|+|+.+ +|++
T Consensus 31 ~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~w 100 (299)
T cd02510 31 KEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKR-----EGLIRARIAGARA----ATGDVLVFLDSHCEV-NVGW 100 (299)
T ss_pred CEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCC-----CCHHHHHHHHHHH----ccCCEEEEEeCCccc-CccH
Confidence 479999999987754322 234578888877652 5899999999998 889999999999999 7999
Q ss_pred HHHHHHHhhcccCCCeEEEEeccceeecCCc-ccccchh---------hHHhHHHH-------Hhhh--hccCCceeecc
Q 009524 114 VRDALCFFMDEEKGHEFAFVQFPQNFDNVTK-NELYSNS---------LRIYNEVE-------FEGM--DGYGGPIYCGS 174 (532)
Q Consensus 114 l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~-nd~~~~~---------~~~~~~~~-------~~g~--d~~~~~~~~Gt 174 (532)
|.+++..+..+. . ++| +|.... .+. ...+... ....+... .... .....+...|.
T Consensus 101 L~~ll~~l~~~~---~-~~v-~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 174 (299)
T cd02510 101 LEPLLARIAENR---K-TVV-CPIIDV-IDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRESPTAPIRSPTMAGG 174 (299)
T ss_pred HHHHHHHHHhCC---C-eEE-Eeeecc-ccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcCCCCCccCccccce
Confidence 999999886432 2 222 232111 000 0000000 00000000 0000 11233456788
Q ss_pred cceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC---CChHHHHHHHH
Q 009524 175 GCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VEDVITGISIQ 251 (532)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv---tED~~t~~~l~ 251 (532)
+.++||+++.+ +| ||+++-. .||+++++|+.
T Consensus 175 ~~~irr~~~~~--------------vG--------------------------------gfDe~~~~~~~ED~Dl~~R~~ 208 (299)
T cd02510 175 LFAIDREWFLE--------------LG--------------------------------GYDEGMDIWGGENLELSFKVW 208 (299)
T ss_pred eeEEEHHHHHH--------------hC--------------------------------CCCCcccccCchhHHHHHHHH
Confidence 89999999998 66 4443322 49999999999
Q ss_pred HcCCEEEEec
Q 009524 252 CQGWKSVYCK 261 (532)
Q Consensus 252 ~~Gwrs~y~~ 261 (532)
.+||+.+|+.
T Consensus 209 ~~G~~i~~~p 218 (299)
T cd02510 209 QCGGSIEIVP 218 (299)
T ss_pred HcCCeEEEee
Confidence 9999999984
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.27 E-value=6.9e-11 Score=114.09 Aligned_cols=151 Identities=17% Similarity=0.098 Sum_probs=100.4
Q ss_pred CCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHH
Q 009524 38 DTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDA 117 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~ 117 (532)
+..|.|+||++++++.+...+ ++++++..+ .+|++|+|.+++. +++|+|+++|+|..+ +|+++.++
T Consensus 28 ~~evivvdd~s~d~~~~~~~~--~~~~~~~~~-------~g~~~a~n~g~~~----a~~~~i~~~D~D~~~-~~~~l~~l 93 (221)
T cd02522 28 PLEIIVVDGGSTDGTVAIARS--AGVVVISSP-------KGRARQMNAGAAA----ARGDWLLFLHADTRL-PPDWDAAI 93 (221)
T ss_pred CcEEEEEeCCCCccHHHHHhc--CCeEEEeCC-------cCHHHHHHHHHHh----ccCCEEEEEcCCCCC-ChhHHHHH
Confidence 456888999998876554443 566665432 3689999999997 679999999999999 79999998
Q ss_pred HHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHhh
Q 009524 118 LCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELK 197 (532)
Q Consensus 118 ~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~ 197 (532)
+..+.++ ....+.....+.+.. . .... .......+.......+.+.|.++||+++..
T Consensus 94 ~~~~~~~----~~~~~~~~~~~~~~~--~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~------------ 150 (221)
T cd02522 94 IETLRAD----GAVAGAFRLRFDDPG--P-RLRL----LELGANLRSRLFGLPYGDQGLFIRRELFEE------------ 150 (221)
T ss_pred HHHhhcC----CcEEEEEEeeecCCc--c-chhh----hhhcccceecccCCCcCCceEEEEHHHHHH------------
Confidence 6666544 233333222222211 1 1110 111111111112233556788999999987
Q ss_pred hccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEE
Q 009524 198 RENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVY 259 (532)
Q Consensus 198 ~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y 259 (532)
+| ||++....||++++.++..+|++..+
T Consensus 151 --~G--------------------------------~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 151 --LG--------------------------------GFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred --hC--------------------------------CCCccccccHHHHHHHHHhCCCEEEc
Confidence 54 67666789999999999999999866
No 46
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.26 E-value=7.6e-11 Score=107.60 Aligned_cols=131 Identities=17% Similarity=0.160 Sum_probs=101.4
Q ss_pred CCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHH
Q 009524 38 DTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDA 117 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~ 117 (532)
+..|.|+||++.+++.+......+++.++..++ ..++++|+|.+++. +++++++++|+|.++ .|+++.++
T Consensus 26 ~~~iiivdd~s~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~ 95 (166)
T cd04186 26 DFEVIVVDNASTDGSVELLRELFPEVRLIRNGE-----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVV-EPGALLEL 95 (166)
T ss_pred CeEEEEEECCCCchHHHHHHHhCCCeEEEecCC-----CcChHHHhhHHHhh----CCCCEEEEECCCcEE-CccHHHHH
Confidence 456899999998876554432234566666543 25899999999998 689999999999999 79999999
Q ss_pred HHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHhh
Q 009524 118 LCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELK 197 (532)
Q Consensus 118 ~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~ 197 (532)
+..+.+. +++++++.. +.|++.++||+++.+
T Consensus 96 ~~~~~~~---~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~------------ 126 (166)
T cd04186 96 LDAAEQD---PDVGIVGPK----------------------------------VSGAFLLVRREVFEE------------ 126 (166)
T ss_pred HHHHHhC---CCceEEEcc----------------------------------CceeeEeeeHHHHHH------------
Confidence 9866543 267777543 788999999999987
Q ss_pred hccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC--CCCChHHHHHHHHHcCCEEEEec
Q 009524 198 RENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG--CPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 198 ~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~--svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
+| ||+.. ...||.+.+.++..+||++.+++
T Consensus 127 --~~--------------------------------~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~ 158 (166)
T cd04186 127 --VG--------------------------------GFDEDFFLYYEDVDLCLRARLAGYRVLYVP 158 (166)
T ss_pred --cC--------------------------------CCChhhhccccHHHHHHHHHHcCCeEEEcc
Confidence 54 34332 24699999999999999998884
No 47
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.21 E-value=2.3e-10 Score=107.04 Aligned_cols=143 Identities=16% Similarity=0.061 Sum_probs=97.2
Q ss_pred CCEEEEEeCCCChhHHhhh---ccCCC-cEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHH
Q 009524 38 DTILQILIDGRDPNAVDNE---GCALP-TLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQA 113 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~---~~~~p-~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~ 113 (532)
+..|.|+||++++.+.+.. ....+ .++++.+++ + ..+|++|+|.+++. +++|+|+++|+|..+ +|++
T Consensus 26 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~-~~~~ 96 (182)
T cd06420 26 PFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQED-E---GFRKAKIRNKAIAA----AKGDYLIFIDGDCIP-HPDF 96 (182)
T ss_pred CCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCC-c---chhHHHHHHHHHHH----hcCCEEEEEcCCccc-CHHH
Confidence 4568899999988653322 11112 345554443 1 24799999999998 789999999999999 7999
Q ss_pred HHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhH
Q 009524 114 VRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETK 193 (532)
Q Consensus 114 l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~ 193 (532)
+.+++..+ ++ .++ |.+++...+..... ..+.|+++.++|+.+.+
T Consensus 97 l~~~~~~~-~~----~~~-v~g~~~~~~~~~~~----------------------~~~~~~~~~~~r~~~~~-------- 140 (182)
T cd06420 97 IADHIELA-EP----GVF-LSGSRVLLNEKLTE----------------------RGIRGCNMSFWKKDLLA-------- 140 (182)
T ss_pred HHHHHHHh-CC----CcE-Eecceeecccccce----------------------eEeccceEEEEHHHHHH--------
Confidence 99999887 43 344 44444333221110 33567788889988876
Q ss_pred HHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCC---CCChHHHHHHHHHcCCEEEEecCC
Q 009524 194 IELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGC---PVEDVITGISIQCQGWKSVYCKPE 263 (532)
Q Consensus 194 ~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~s---vtED~~t~~~l~~~Gwrs~y~~~~ 263 (532)
.| ||+..- -.||+++++|+..+|++..++.++
T Consensus 141 ------~g--------------------------------gf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~ 175 (182)
T cd06420 141 ------VN--------------------------------GFDEEFTGWGGEDSELVARLLNSGIKFRKLKFA 175 (182)
T ss_pred ------hC--------------------------------CCCcccccCCcchHHHHHHHHHcCCcEEEeccc
Confidence 54 443322 269999999999999777766543
No 48
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.20 E-value=5.5e-10 Score=107.98 Aligned_cols=165 Identities=12% Similarity=0.033 Sum_probs=106.1
Q ss_pred CCCEEEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHH
Q 009524 37 HDTILQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQA 113 (532)
Q Consensus 37 hp~~v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~ 113 (532)
++..|.|+||+++|++.+ ....+.+.+.++..+++ .+|++|+|.+++. +.+|+|+++|+|..+ +|+.
T Consensus 26 ~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~ 95 (224)
T cd06442 26 IDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGK-----RGLGSAYIEGFKA----ARGDVIVVMDADLSH-PPEY 95 (224)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCC-----CChHHHHHHHHHH----cCCCEEEEEECCCCC-CHHH
Confidence 456799999999876533 22234577777777653 6899999999998 789999999999999 7999
Q ss_pred HHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHh---HHHHHhhhhccCCceeecccceeehHhhccCCCCh
Q 009524 114 VRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIY---NEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDK 190 (532)
Q Consensus 114 l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~---~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~ 190 (532)
+.+++..+.++ +.++|.++..... .....+....... ......-....+.....|++.++||+++.+
T Consensus 96 l~~l~~~~~~~----~~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----- 165 (224)
T cd06442 96 IPELLEAQLEG----GADLVIGSRYVEG-GGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFRAYRREVLEK----- 165 (224)
T ss_pred HHHHHHHHhcC----CCCEEEEeeeecC-CccCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCccchhhHHHHHH-----
Confidence 99999987665 3455555432221 1111111111111 111111111223344567777899999987
Q ss_pred hhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 191 ETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 191 ~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
+|. ++......+|.++.+++...||++.+..
T Consensus 166 ---------ig~-------------------------------~~~~~~~~~~~~l~~~~~~~g~~i~~~p 196 (224)
T cd06442 166 ---------LID-------------------------------SLVSKGYKFQLELLVRARRLGYRIVEVP 196 (224)
T ss_pred ---------Hhh-------------------------------hccCCCcEEeHHHHHHHHHcCCeEEEeC
Confidence 430 1222234668889999999999999974
No 49
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.13 E-value=1.5e-09 Score=105.42 Aligned_cols=173 Identities=15% Similarity=0.059 Sum_probs=103.5
Q ss_pred CCCCC--CEEEEEeCCCChhHHhhh---c--cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC
Q 009524 34 RLDHD--TILQILIDGRDPNAVDNE---G--CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 34 ~~dhp--~~v~Vldd~~~~~~~~~~---~--~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~ 106 (532)
.|++| ..|.|+||++.|.+.+.. . ...+++.++..+.+.+ ...+.+.|+|.+++. ++||+++.+|+|.
T Consensus 21 ~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~ 95 (219)
T cd06913 21 QQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDD 95 (219)
T ss_pred hCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCC-CCccHHHHHHHHHHh----cCCCEEEEECCCc
Confidence 34554 368999999987653211 1 1235677777654322 235899999999998 8999999999999
Q ss_pred CCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHh-HHHHHhhhhccCCceeecccceeehHhhcc
Q 009524 107 YSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIY-NEVEFEGMDGYGGPIYCGSGCFHRREILCG 185 (532)
Q Consensus 107 ~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~-~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (532)
.+ +|+.+.+.+..+.+.. .++|-.+......+....+....... ............++.....+.++||+++.+
T Consensus 96 ~~-~~~~l~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 170 (219)
T cd06913 96 VM-MPQRIRLQYEAALQHP----NSIIGCQVRRIPEDSTERYTRWINTLTREQLLTQVYTSHGPTVIMPTWFCSREWFSH 170 (219)
T ss_pred cC-ChhHHHHHHHHHHhCC----CcEEEEEEEecCcccchhhHHHHHhcCHHHHHHHHHhhcCCccccccceeehhHHhh
Confidence 99 7999998877765421 12332211111111111111100000 000111111122333344457899999987
Q ss_pred CCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC--CCCChHHHHHHHHHcCCEEEEecC
Q 009524 186 RKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG--CPVEDVITGISIQCQGWKSVYCKP 262 (532)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~--svtED~~t~~~l~~~Gwrs~y~~~ 262 (532)
+| ||+.. ...||+++.+|+..+|++..|++.
T Consensus 171 --------------~g--------------------------------~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~ 203 (219)
T cd06913 171 --------------VG--------------------------------PFDEGGKGVPEDLLFFYEHLRKGGGVYRVDR 203 (219)
T ss_pred --------------cC--------------------------------CccchhccchhHHHHHHHHHHcCCceEEEcc
Confidence 65 44332 346999999999999999999854
No 50
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.13 E-value=7.1e-10 Score=112.22 Aligned_cols=168 Identities=15% Similarity=0.074 Sum_probs=106.3
Q ss_pred CEEEEEeCCCChh-HHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHH
Q 009524 39 TILQILIDGRDPN-AVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDA 117 (532)
Q Consensus 39 ~~v~Vldd~~~~~-~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~ 117 (532)
..|.|+||+++++ ..+..-...|.+.|+..+++ .|.|+|+|.+++..- ..++|+|+.+|.|.++ +|+++.++
T Consensus 22 ~~iiVVDN~S~~~~~~~~~~~~~~~i~~i~~~~N-----~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~-~~~~l~~l 94 (281)
T TIGR01556 22 DRIIAVDNSPHSDQPLKNARLRGQKIALIHLGDN-----QGIAGAQNQGLDASF-RRGVQGVLLLDQDSRP-GNAFLAAQ 94 (281)
T ss_pred CEEEEEECcCCCcHhHHHHhccCCCeEEEECCCC-----cchHHHHHHHHHHHH-HCCCCEEEEECCCCCC-CHHHHHHH
Confidence 4699999997543 22222224588999887653 489999999999721 1378999999999999 69999999
Q ss_pred HHHhhcccCCCeEEEEeccceeecCCcccccch--hhHHhHHHH-Hhhhhc-cCCceeecccceeehHhhccCCCChhhH
Q 009524 118 LCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSN--SLRIYNEVE-FEGMDG-YGGPIYCGSGCFHRREILCGRKYDKETK 193 (532)
Q Consensus 118 ~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~--~~~~~~~~~-~~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~ 193 (532)
+..+..+ +.++++++ |..+. ...+..+.. ......... ...... .......++|+++||+++++
T Consensus 95 ~~~~~~~--~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~-------- 162 (281)
T TIGR01556 95 WKLLSAE--NGQACALG-PRFFD-RGTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQR-------- 162 (281)
T ss_pred HHHHHhc--CCceEEEC-CeEEc-CCCcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHH--------
Confidence 9888643 12577775 43332 222111111 000000000 000011 12234578899999999988
Q ss_pred HHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 194 IELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 194 ~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
+|+++.. =|. =.||++..+|+..+||++.++.
T Consensus 163 ------iG~fde~---------------------------~fi---~~~D~e~~~R~~~~G~~i~~~~ 194 (281)
T TIGR01556 163 ------LGMMDEE---------------------------LFI---DHVDTEWSLRAQNYGIPLYIDP 194 (281)
T ss_pred ------hCCccHh---------------------------hcc---cchHHHHHHHHHHCCCEEEEeC
Confidence 6643321 011 1489999999999999999984
No 51
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.13 E-value=7.8e-10 Score=105.69 Aligned_cols=166 Identities=16% Similarity=0.075 Sum_probs=106.3
Q ss_pred CCCC-CEEEEEeCCCChhHHh---hhccCCCc-EEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCC
Q 009524 35 LDHD-TILQILIDGRDPNAVD---NEGCALPT-LVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSN 109 (532)
Q Consensus 35 ~dhp-~~v~Vldd~~~~~~~~---~~~~~~p~-l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~ 109 (532)
|++| ..|.|+|||++|++.+ ..+.+.|. ++++..++ .+++++|+|.+++. +++|+|+++|+|.+.
T Consensus 23 q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~- 92 (214)
T cd04196 23 QTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGK-----NLGVARNFESLLQA----ADGDYVFFCDQDDIW- 92 (214)
T ss_pred CcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCC-----CccHHHHHHHHHHh----CCCCEEEEECCCccc-
Confidence 3443 4699999999886533 33334443 44444433 36899999999997 789999999999999
Q ss_pred chHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHHhHHH--HHhhhhccCCceeecccceeehHhhccC
Q 009524 110 NSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEV--EFEGMDGYGGPIYCGSGCFHRREILCGR 186 (532)
Q Consensus 110 ~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~--~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 186 (532)
.|+.|.+++..+. ++ ..+++.+.....+.+... ........... ............+.|+++++||+++.+
T Consensus 93 ~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~- 166 (214)
T cd04196 93 LPDKLERLLKAFLKDD----KPLLVYSDLELVDENGNP-IGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLEL- 166 (214)
T ss_pred ChhHHHHHHHHHhcCC----CceEEecCcEEECCCCCC-cccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHh-
Confidence 7999999998844 44 567777765544322111 00000000000 000111112334679999999999987
Q ss_pred CCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC-CCCChHHHHHHHHHcCCEEEEecC
Q 009524 187 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKP 262 (532)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 262 (532)
+| +++.. ...||..+..++.. |.+..|+++
T Consensus 167 -------------~~--------------------------------~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 167 -------------AL--------------------------------PFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred -------------hc--------------------------------cccccccccchHHHHHHHHH-cCceEEcch
Confidence 43 44443 56899999998877 668888854
No 52
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.13 E-value=1e-09 Score=108.77 Aligned_cols=165 Identities=12% Similarity=-0.034 Sum_probs=103.7
Q ss_pred CCEEEEEeCCCChhHHhhh---ccCC--CcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchH
Q 009524 38 DTILQILIDGRDPNAVDNE---GCAL--PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQ 112 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~---~~~~--p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~ 112 (532)
+..|.|+||+++|++.+.. ..+. +.+.++.+++ ..+|++|+|.+++. +++|+++++|+|..+ +|+
T Consensus 40 ~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~ 109 (243)
T PLN02726 40 DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPK 109 (243)
T ss_pred CeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHH
Confidence 4569999999988764422 1122 3566665543 25799999999998 789999999999999 799
Q ss_pred HHHHHHHHhhcccCCCeEEEEeccceeecCC-cccccch-hhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCCh
Q 009524 113 AVRDALCFFMDEEKGHEFAFVQFPQNFDNVT-KNELYSN-SLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDK 190 (532)
Q Consensus 113 ~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~-~nd~~~~-~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~ 190 (532)
++.+++..+.++ +.++|.+.....+.. ....+.. .....+.....-..+.+..-..|...+|||+++..
T Consensus 110 ~l~~l~~~~~~~----~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~----- 180 (243)
T PLN02726 110 YLPSFIKKQRET----GADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALED----- 180 (243)
T ss_pred HHHHHHHHHHhc----CCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHH-----
Confidence 999999888664 356665543221111 0000101 01111121111111222333567777999999987
Q ss_pred hhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 191 ETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 191 ~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
++.. ...+...+|+++.+++..+||+..+++
T Consensus 181 ---------i~~~-------------------------------~~~~~~~~~~el~~~~~~~g~~i~~vp 211 (243)
T PLN02726 181 ---------LVSS-------------------------------VVSKGYVFQMEIIVRASRKGYRIEEVP 211 (243)
T ss_pred ---------HHhh-------------------------------ccCCCcEEehHHHHHHHHcCCcEEEeC
Confidence 3210 111224568999999999999999983
No 53
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.07 E-value=2.9e-09 Score=101.69 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=97.5
Q ss_pred CEEEEEeCCCChhHHhh---hccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHH
Q 009524 39 TILQILIDGRDPNAVDN---EGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVR 115 (532)
Q Consensus 39 ~~v~Vldd~~~~~~~~~---~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~ 115 (532)
..|.|+||+++|++.+. .+...+ +.+++.+++ .+++.++|.+++... ..++|+++++|+|.++ +|++++
T Consensus 27 ~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n-----~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~-~~~~l~ 98 (202)
T cd04185 27 DHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPEN-----LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP-DPDALE 98 (202)
T ss_pred ceEEEEECCCCcchHHHHHHhcCCCc-eEEEECccc-----cchhhHHHHHHHHHh-ccCCCEEEEeCCCCCc-ChHHHH
Confidence 46999999998876442 332233 666666542 478889999888632 3579999999999999 799999
Q ss_pred HHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHH
Q 009524 116 DALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIE 195 (532)
Q Consensus 116 ~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~ 195 (532)
+++..+.++ +++.+. |..+.. +. +++|.++||+++..
T Consensus 99 ~l~~~~~~~----~~~~~~-~~~~~~-~~---------------------------~~~~~~~~~~~~~~---------- 135 (202)
T cd04185 99 KLLAYADKD----NPQFLA-PLVLDP-DG---------------------------SFVGVLISRRVVEK---------- 135 (202)
T ss_pred HHHHHHhcC----CceEec-ceeEcC-CC---------------------------ceEEEEEeHHHHHH----------
Confidence 999988765 566663 332221 10 45678999999987
Q ss_pred hhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecC
Q 009524 196 LKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKP 262 (532)
Q Consensus 196 ~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~ 262 (532)
+|++... +....||.+.+.++..+|++. |+..
T Consensus 136 ----~g~~~~~------------------------------~~~~~eD~~~~~r~~~~G~~i-~~~~ 167 (202)
T cd04185 136 ----IGLPDKE------------------------------FFIWGDDTEYTLRASKAGPGI-YVPD 167 (202)
T ss_pred ----hCCCChh------------------------------hhccchHHHHHHHHHHcCCcE-Eecc
Confidence 4422110 112469999999999999999 8844
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.07 E-value=4.2e-10 Score=102.03 Aligned_cols=133 Identities=20% Similarity=0.231 Sum_probs=84.2
Q ss_pred CCEEEEEeCCCChhHHhhhc---cCC-CcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHH
Q 009524 38 DTILQILIDGRDPNAVDNEG---CAL-PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQA 113 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~---~~~-p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~ 113 (532)
+..|.|+||++++++.+... ... +.++++..++ ..+|+.|+|.+++. +++++++++|+|..+ .|++
T Consensus 26 ~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~-~~~~ 95 (180)
T cd06423 26 KLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKE-----NGGKAGALNAGLRH----AKGDIVVVLDADTIL-EPDA 95 (180)
T ss_pred ceEEEEEeCCCccchHHHHHHHhccccceEEEEEecc-----cCCchHHHHHHHHh----cCCCEEEEECCCCCc-ChHH
Confidence 45699999999887643222 111 3355555554 25899999999998 699999999999999 7999
Q ss_pred HHHHHHHh-hcccCCCeEEEEeccceeecCCcccccchhhHHhH----HHHHhhhhccC-CceeecccceeehHhhcc
Q 009524 114 VRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYN----EVEFEGMDGYG-GPIYCGSGCFHRREILCG 185 (532)
Q Consensus 114 l~~~~~~f-~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~----~~~~~g~d~~~-~~~~~Gtg~~~RR~aL~~ 185 (532)
+.+++..+ .++ +++.|.......+...+ .........+ .....+....+ ...+.|+++++||+++++
T Consensus 96 l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 168 (180)
T cd06423 96 LKRLVVPFFADP----KVGAVQGRVRVRNGSEN-LLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALRE 168 (180)
T ss_pred HHHHHHHhccCC----CeeeEeeeEEEecCcCc-ceeccchheecceeeeeeehhheecceeecCchHHHHHHHHHHH
Confidence 99995544 454 67777655544332211 1111111111 11111111122 245799999999999997
No 55
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.02 E-value=7.9e-09 Score=112.81 Aligned_cols=165 Identities=18% Similarity=0.126 Sum_probs=106.9
Q ss_pred CCCcEEEEecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHHhH---HHHHhhhhcc-CC
Q 009524 94 SNGQVTLNVDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYN---EVEFEGMDGY-GG 168 (532)
Q Consensus 94 s~~~~IlvlDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~---~~~~~g~d~~-~~ 168 (532)
...|||+.+|||+.+ +|+.+.+++.-+. || +++.|.+--+..|...+. +.--|...| ...+++.... |.
T Consensus 200 ~~~~~il~~DaDt~~-~p~~~~~lv~~m~~d~----~i~gvCG~t~i~n~~~s~-~t~~Q~fEY~ish~l~Ka~Es~fG~ 273 (527)
T PF03142_consen 200 DFYEYILMVDADTKF-DPDSVNRLVDAMERDP----KIGGVCGETRIDNKGQSW-WTMYQVFEYAISHHLQKAFESVFGS 273 (527)
T ss_pred cceEEEEEecCCceE-cHHHHHHHHHHHcCCC----CeEEEeceeEEcCCCCCH-hhheeccchhHHHHHHHHHHHHhCc
Confidence 346999999999999 8999999998875 65 788887755555643332 222222333 2344554443 43
Q ss_pred c-eeecccceeehHhhccCCC--C-----hhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC
Q 009524 169 P-IYCGSGCFHRREILCGRKY--D-----KETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP 240 (532)
Q Consensus 169 ~-~~~Gtg~~~RR~aL~~~~~--~-----~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv 240 (532)
. ++.|..+++|-+++..... . ++.-+++ .....+.+.+. .-..+
T Consensus 274 VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y-------~~~~~dtlh~~---------------------nl~~l 325 (527)
T PF03142_consen 274 VTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKY-------SENPVDTLHQK---------------------NLLDL 325 (527)
T ss_pred eeecCCcceeeeeehhccccccccccccchHHHHHH-------hhccchHHHHH---------------------hhhhc
Confidence 3 4578888999999986211 0 1110011 00000001000 00147
Q ss_pred CChHHHHHHHHHc--CCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHH
Q 009524 241 VEDVITGISIQCQ--GWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIML 294 (532)
Q Consensus 241 tED~~t~~~l~~~--Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~ 294 (532)
.||-.++..|.++ |||..|+.. . ...+.+|+|++.+++||+||..|++--++
T Consensus 326 GEDR~LttLlLk~~~~~k~~y~~~-A-~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 326 GEDRWLTTLLLKQFPGYKTEYVPS-A-VAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred chhHHHHHHHHhhCCCceEEEccc-c-cccccCCccHHHHHHHhhhccchhHhhHh
Confidence 8999999888777 899999943 3 34799999999999999999999986553
No 56
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.98 E-value=1.2e-08 Score=98.48 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=59.2
Q ss_pred CCEEEEEeCCCChhHHhh---hccCCCcE-EEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHH
Q 009524 38 DTILQILIDGRDPNAVDN---EGCALPTL-VYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQA 113 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~---~~~~~p~l-~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~ 113 (532)
+..|.|+||+++|++.+. ...+.|.. +++..+++ .+|++|+|.+++. +.+|+|+++|+|... +|+.
T Consensus 30 ~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~~~g~~~----a~gd~i~~ld~D~~~-~~~~ 99 (211)
T cd04188 30 SYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKN-----RGKGGAVRAGMLA----ARGDYILFADADLAT-PFEE 99 (211)
T ss_pred CEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccC-----CCcHHHHHHHHHH----hcCCEEEEEeCCCCC-CHHH
Confidence 456889999998875332 22234554 55555442 4799999999998 789999999999999 7999
Q ss_pred HHHHHHHhhcc
Q 009524 114 VRDALCFFMDE 124 (532)
Q Consensus 114 l~~~~~~f~d~ 124 (532)
+.+++..+.++
T Consensus 100 l~~l~~~~~~~ 110 (211)
T cd04188 100 LEKLEEALKTS 110 (211)
T ss_pred HHHHHHHHhcc
Confidence 99999886654
No 57
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.96 E-value=9.4e-10 Score=99.72 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=89.6
Q ss_pred CCCCEEEEEeCCCChhHHhhhc---cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchH
Q 009524 36 DHDTILQILIDGRDPNAVDNEG---CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQ 112 (532)
Q Consensus 36 dhp~~v~Vldd~~~~~~~~~~~---~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~ 112 (532)
+++..|.|+||++++++.+... ...+++.|++++++ .++++|+|.+++. +.++|++++|+|.++ .|+
T Consensus 25 ~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~-~~~ 94 (169)
T PF00535_consen 25 DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPEN-----LGFSAARNRGIKH----AKGEYILFLDDDDII-SPD 94 (169)
T ss_dssp GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TT
T ss_pred CCCEEEEEecccccccccccccccccccccccccccccc-----ccccccccccccc----cceeEEEEeCCCceE-cHH
Confidence 4566799999999776543222 12578999999863 4899999999998 889999999999999 699
Q ss_pred HHHHHHHHhhcccCCCeEEEEeccceeecCCcccccch--hhHHhHHHHHhhhhccCCceeecccceeehHhhcc
Q 009524 113 AVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSN--SLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 185 (532)
Q Consensus 113 ~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~--~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (532)
++.+++..+.+++ ..+.....+....+......... .....+..............++|+++++||+++++
T Consensus 95 ~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 167 (169)
T PF00535_consen 95 WLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEE 167 (169)
T ss_dssp HHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHH
T ss_pred HHHHHHHHHHhCC--CcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHh
Confidence 9999999998742 23333332222222111110000 01122233344445556678999999999999986
No 58
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.96 E-value=6.2e-09 Score=108.52 Aligned_cols=199 Identities=12% Similarity=0.060 Sum_probs=116.7
Q ss_pred CCCCCCC-EEEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCC
Q 009524 33 SRLDHDT-ILQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYS 108 (532)
Q Consensus 33 ~~~dhp~-~v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~ 108 (532)
..|++++ .|.|+|||++|++.+ ....+.|++.+++.++ .+.++|.|.+++. ++||||+.+|+|..+
T Consensus 29 ~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~n------~G~~~arN~gl~~----a~g~yi~flD~DD~~ 98 (328)
T PRK10073 29 IAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQAN------AGVSVARNTGLAV----ATGKYVAFPDADDVV 98 (328)
T ss_pred HhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECCC------CChHHHHHHHHHh----CCCCEEEEECCCCcc
Confidence 3455554 588999999887533 2233568888886432 5899999999998 899999999999999
Q ss_pred CchHHHHHHHHHhhcccCCCeEEEEeccceeecCC-cc------cccchhhHHh--HHHHHhhhhccCCceeecccceee
Q 009524 109 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVT-KN------ELYSNSLRIY--NEVEFEGMDGYGGPIYCGSGCFHR 179 (532)
Q Consensus 109 ~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~-~n------d~~~~~~~~~--~~~~~~g~d~~~~~~~~Gtg~~~R 179 (532)
.|+.+.+++..+.++. ..++.... ..+++.. .. +..... .++ .+........-. ......+.++|
T Consensus 99 -~p~~l~~l~~~~~~~~--~dvv~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~-~~~~~~~~l~R 172 (328)
T PRK10073 99 -YPTMYETLMTMALEDD--LDVAQCNA-DWCFRDTGETWQSIPSDRLRST-GVLSGPDWLRMALSSRR-WTHVVWLGVYR 172 (328)
T ss_pred -ChhHHHHHHHHHHhCC--CCEEEEcc-EEEEeCCCcccccccccccccc-ceechHHHHHHHHhhCC-CCccHhHHHHH
Confidence 7999999998876541 23433321 2222111 00 000000 000 001111111100 11122356899
Q ss_pred hHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEE
Q 009524 180 REILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVY 259 (532)
Q Consensus 180 R~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y 259 (532)
|+.+.+ .| ..|+.+...||+...+++..++.++.|
T Consensus 173 r~~l~~--------------~~-------------------------------~~f~~~~~~eD~~~~~~~~~~~~~v~~ 207 (328)
T PRK10073 173 RDFIVK--------------NN-------------------------------IKFEPGLHHQDIPWTTEVMFNALRVRY 207 (328)
T ss_pred HHHHHH--------------cC-------------------------------CccCCCCEeccHHHHHHHHHHCCEEEE
Confidence 998876 32 245666667999999999999999999
Q ss_pred ecCCcccccccCCCCHHH---HHHHHHHhcccchhhH
Q 009524 260 CKPERDAFLGVSPTTLLQ---FLVQRKRWSEGDFQIM 293 (532)
Q Consensus 260 ~~~~~~a~~g~aP~tl~~---~l~Qr~RWa~G~lqi~ 293 (532)
++.. ...+-.-+.++.. .-+++.++....++++
T Consensus 208 ~~~~-ly~Yr~~~~Sis~~~~~~~~~~~~~~~~~~i~ 243 (328)
T PRK10073 208 TEQS-LYKYYLHDTSVSRLPRQGNKNLNYQRHYIKIT 243 (328)
T ss_pred ECCC-EEEEEecCCcccCCCCcchHHHHHHHHHHHHH
Confidence 8643 3333333333322 1123445555555553
No 59
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.88 E-value=3.4e-08 Score=100.61 Aligned_cols=173 Identities=16% Similarity=0.133 Sum_probs=105.6
Q ss_pred CCEEEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHH
Q 009524 38 DTILQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAV 114 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l 114 (532)
.-.|.|+|++++++..+ ....+.....|+.-+.. + ..-++|.|.|.|++. +++|+|+++|+|+++ .|+++
T Consensus 34 ~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~-~-~~f~~a~arN~g~~~----A~~d~l~flD~D~i~-~~~~i 106 (281)
T PF10111_consen 34 DFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDN-G-EPFSRAKARNIGAKY----ARGDYLIFLDADCIP-SPDFI 106 (281)
T ss_pred CEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCC-C-CCcCHHHHHHHHHHH----cCCCEEEEEcCCeee-CHHHH
Confidence 34588889998866321 11112233447655432 1 124899999999998 899999999999999 79999
Q ss_pred HHHHHHhhcccCCCeEEEEeccceeecCCcccccchhh-----HHhHHHHHh-hhhccCCceeecccceeehHhhccCCC
Q 009524 115 RDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL-----RIYNEVEFE-GMDGYGGPIYCGSGCFHRREILCGRKY 188 (532)
Q Consensus 115 ~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~-----~~~~~~~~~-g~d~~~~~~~~Gtg~~~RR~aL~~~~~ 188 (532)
.+++.+..+-.. ..-+++-.|..+.+.+.+..+.... ....+.... ..+.++.....|++.+++|+.+.+
T Consensus 107 ~~~~~~~~~l~~-~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~--- 182 (281)
T PF10111_consen 107 EKLLNHVKKLDK-NPNAFLVYPCLYLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLE--- 182 (281)
T ss_pred HHHHHHHHHHhc-CCCceEEEeeeeccchhhHHHhhcchhcchHHHHHHHhhccccccccccccceEEEEEHHHHHH---
Confidence 999983211000 1234555566655543222111111 011111111 122333334567888999999988
Q ss_pred ChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEec
Q 009524 189 DKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 261 (532)
Q Consensus 189 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 261 (532)
+||++..- .|| =.||+|++.||...|.+..++.
T Consensus 183 -----------iGGfDE~f-------------------------~G~----G~ED~D~~~RL~~~~~~~~~~~ 215 (281)
T PF10111_consen 183 -----------IGGFDERF-------------------------RGW----GYEDIDFGYRLKKAGYKFKRSP 215 (281)
T ss_pred -----------hCCCCccc-------------------------cCC----CcchHHHHHHHHHcCCcEecCh
Confidence 87655221 122 2599999999999999988774
No 60
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.83 E-value=1e-07 Score=95.48 Aligned_cols=155 Identities=12% Similarity=0.010 Sum_probs=93.2
Q ss_pred CEEEEEeCCCChhHHhhhcc--CCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHH
Q 009524 39 TILQILIDGRDPNAVDNEGC--ALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRD 116 (532)
Q Consensus 39 ~~v~Vldd~~~~~~~~~~~~--~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~ 116 (532)
..|.|+|||++|.+.+.... .-+.+.+++.+ .+|+++|+|.|++. +.||+|+.+|+|... +|+.++.
T Consensus 34 ~EiIVvDdgStD~t~~i~~~~~~~~~i~~i~~~------~~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~-~~~~~~~ 102 (248)
T PRK10063 34 FEWIVVDGGSNDGTREFLENLNGIFNLRFVSEP------DNGIYDAMNKGIAM----AQGRFALFLNSGDIF-HQDAANF 102 (248)
T ss_pred EEEEEEECcCcccHHHHHHHhcccCCEEEEECC------CCCHHHHHHHHHHH----cCCCEEEEEeCCccc-CcCHHHH
Confidence 45899999998876553321 11346777532 14899999999998 789999999999999 6886654
Q ss_pred HHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHh
Q 009524 117 ALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIEL 196 (532)
Q Consensus 117 ~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~ 196 (532)
.......+ +...++ +.......+.+. ...... +..........++.+.++||+.+..
T Consensus 103 ~~~~~~~~---~~~~v~-g~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~----------- 159 (248)
T PRK10063 103 VRQLKMQK---DNAMII-GDALLDFGDGHK-IKRSAK-------PGWYIYHSLPASHQAIFFPVSGLKK----------- 159 (248)
T ss_pred HHHHHhCC---CCeEEE-eeeEEEcCCCcE-EEEccC-------ChhHHhcCCCCCCcEEEEEHHHHhc-----------
Confidence 33333222 133333 222211111111 110000 0000011123466778899988764
Q ss_pred hhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC-CCCChHHHHHHHHHcCCEEEEecCC
Q 009524 197 KRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKPE 263 (532)
Q Consensus 197 ~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~ 263 (532)
+||+.. ...||.++.+++..+|++..+++..
T Consensus 160 ------------------------------------~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~ 191 (248)
T PRK10063 160 ------------------------------------WRYDLQYKVSSDYALAARLYKAGYAFKKLNGL 191 (248)
T ss_pred ------------------------------------CCCCcccchHHhHHHHHHHHHcCCcEEEcCce
Confidence 134332 3579999999999999999998543
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.80 E-value=2.6e-08 Score=93.22 Aligned_cols=136 Identities=13% Similarity=0.088 Sum_probs=87.6
Q ss_pred CCCCEEEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchH
Q 009524 36 DHDTILQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQ 112 (532)
Q Consensus 36 dhp~~v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~ 112 (532)
.++..|.|+||++++++.+ ....+.+.++++..+++ .+|++|+|.+++. +.+|+++++|+|..+ +|+
T Consensus 26 ~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~ 95 (185)
T cd04179 26 GYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRN-----FGKGAAVRAGFKA----ARGDIVVTMDADLQH-PPE 95 (185)
T ss_pred CCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCC-----CCccHHHHHHHHH----hcCCEEEEEeCCCCC-CHH
Confidence 3467799999999876533 33345677777777663 4799999999998 788999999999999 799
Q ss_pred HHHHHHHHhhcccCCCeEEEEeccceeecCCc-ccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhcc
Q 009524 113 AVRDALCFFMDEEKGHEFAFVQFPQNFDNVTK-NELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 185 (532)
Q Consensus 113 ~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~-nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (532)
.|.+++..+.++ ..++|+.+....+... ...+.......+................|...++||+++.+
T Consensus 96 ~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (185)
T cd04179 96 DIPKLLEKLLEG----GADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEA 165 (185)
T ss_pred HHHHHHHHHhcc----CCcEEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHH
Confidence 999999886554 3566776655443210 01111111111111111112222333456667899999988
No 62
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.78 E-value=5.5e-08 Score=110.04 Aligned_cols=166 Identities=17% Similarity=0.148 Sum_probs=109.7
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHHhH
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYN 156 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~ 156 (532)
.|--.+|.+... .+.+-++|+++|+|+.+ +|+++.+++.-|. || +||-+.+ +..|.-.. .+-..|...|
T Consensus 425 ~~r~~~y~~~~~--L~~~v~~il~vD~dT~~-~P~ai~~lv~~f~~dp----~VggaCG--~I~~~~~~-w~v~~Q~FEY 494 (862)
T KOG2571|consen 425 QHRWVMYTAFKA--LMPSVDYILVVDADTRL-DPDALYHLVKVFDEDP----QVGGACG--RILNKGGS-WVVAYQNFEY 494 (862)
T ss_pred HHHHHHHHHHHH--hcCcceEEEEecCCCcc-CcHHHHHHHHHhccCc----ccceecc--ccccCCCc-eEEeHHHHHH
Confidence 344455555554 23566799999999999 8999999999997 77 6777766 33332221 1222233333
Q ss_pred H---HHHhhhhcc-CCc-eeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCcccc
Q 009524 157 E---VEFEGMDGY-GGP-IYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGK 231 (532)
Q Consensus 157 ~---~~~~g~d~~-~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~ 231 (532)
. ..++.-+.. |.. +..|.-++||-+||.+-.. +.+-++. .=|.
T Consensus 495 ~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~-----~~~y~~~---------------------------~~~~ 542 (862)
T KOG2571|consen 495 AISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV-----EYFYGEK---------------------------FSGP 542 (862)
T ss_pred HHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH-----Hhhhchh---------------------------hcCc
Confidence 3 234444433 433 2467777999999987221 0000000 0011
Q ss_pred ccccCCCCCCChHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhccc
Q 009524 232 EIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEG 288 (532)
Q Consensus 232 ~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G 288 (532)
.-|..+. ..||-.+..++..+||+.-||... ....++|+++.+++.||+||..|
T Consensus 543 ~~~~~~~-~geDR~L~~~llskgy~l~Y~a~s--~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 543 RHGIQYS-LGEDRWLCTLLLSKGYRLKYVAAS--DAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ccccccc-cchhHHHHHHHHhccceeeeeccc--cccccCcHhHHHHHHHhhhhccc
Confidence 1133443 899999999999999999999543 34799999999999999999999
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.68 E-value=1.6e-07 Score=88.14 Aligned_cols=130 Identities=11% Similarity=0.123 Sum_probs=81.8
Q ss_pred CCEEEEEeCCCChhHHh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHH
Q 009524 38 DTILQILIDGRDPNAVD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAV 114 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l 114 (532)
+..|.|+||++.+++.+ ....+.|++.++..+++ .+|++|+|.+++. +.+|+|+++|+|..+ +|+++
T Consensus 29 ~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~n~g~~~----a~~d~i~~~D~D~~~-~~~~l 98 (181)
T cd04187 29 DYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRN-----FGQQAALLAGLDH----ARGDAVITMDADLQD-PPELI 98 (181)
T ss_pred CeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCC-----CCcHHHHHHHHHh----cCCCEEEEEeCCCCC-CHHHH
Confidence 45688999999876532 23334578888777642 5799999999998 789999999999999 79999
Q ss_pred HHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhcc
Q 009524 115 RDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 185 (532)
Q Consensus 115 ~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (532)
.+++..+.+. .++.... ....+ . + .........+........+..-+...|+..++||+++.+
T Consensus 99 ~~l~~~~~~~---~~~v~g~--~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 161 (181)
T cd04187 99 PEMLAKWEEG---YDVVYGV--RKNRK-E-S-WLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDA 161 (181)
T ss_pred HHHHHHHhCC---CcEEEEE--ecCCc-c-h-HHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHH
Confidence 9999875322 2333222 21111 1 1 111111111111112222333345678888999999998
No 64
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.63 E-value=2.7e-07 Score=94.12 Aligned_cols=81 Identities=15% Similarity=0.098 Sum_probs=61.3
Q ss_pred CCCCCCC-EEEEEeCCCChh-H-Hhhh-ccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCC
Q 009524 33 SRLDHDT-ILQILIDGRDPN-A-VDNE-GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYS 108 (532)
Q Consensus 33 ~~~dhp~-~v~Vldd~~~~~-~-~~~~-~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~ 108 (532)
..|++|+ .|.|+||++.+. . .+.. ....|++.|+..+++ .|++.|+|.|++. ++||||+.+|+|...
T Consensus 28 l~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n-----~G~~~a~N~gi~~----a~g~~I~~lDaDD~~ 98 (279)
T PRK10018 28 LRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDIN-----SGACAVRNQAIML----AQGEYITGIDDDDEW 98 (279)
T ss_pred HhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCCC
Confidence 3566775 488999999742 1 2211 112478888876642 6899999999998 899999999999999
Q ss_pred CchHHHHHHHHHhhc
Q 009524 109 NNSQAVRDALCFFMD 123 (532)
Q Consensus 109 ~~p~~l~~~~~~f~d 123 (532)
.|+.|.+.+.++..
T Consensus 99 -~p~~l~~~~~~~~~ 112 (279)
T PRK10018 99 -TPNRLSVFLAHKQQ 112 (279)
T ss_pred -CccHHHHHHHHHHh
Confidence 69999999887753
No 65
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.60 E-value=3.8e-07 Score=80.47 Aligned_cols=126 Identities=19% Similarity=0.139 Sum_probs=89.1
Q ss_pred CCEEEEEeCCCChhHHhhh---ccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHH
Q 009524 38 DTILQILIDGRDPNAVDNE---GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAV 114 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~---~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l 114 (532)
+..|.|+||+++++..+.. ....+...++.+++ +.+|++++|.+++. .++|+++++|+|.++ +|+++
T Consensus 26 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~-~~~~~ 95 (156)
T cd00761 26 NFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEE-----NQGLAAARNAGLKA----ARGEYILFLDADDLL-LPDWL 95 (156)
T ss_pred ceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecC-----CCChHHHHHHHHHH----hcCCEEEEECCCCcc-CccHH
Confidence 5568899999887653322 11113355555543 36899999999998 689999999999999 79999
Q ss_pred HHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhH
Q 009524 115 RDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETK 193 (532)
Q Consensus 115 ~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~ 193 (532)
...+..+. ++ +.++|+++ +++++|++++..
T Consensus 96 ~~~~~~~~~~~----~~~~v~~~-------------------------------------~~~~~~~~~~~~-------- 126 (156)
T cd00761 96 ERLVAELLADP----EADAVGGP-------------------------------------GNLLFRRELLEE-------- 126 (156)
T ss_pred HHHHHHHhcCC----CceEEecc-------------------------------------chheeeHHHHHH--------
Confidence 98754443 43 56777655 778999999987
Q ss_pred HHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEE
Q 009524 194 IELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSV 258 (532)
Q Consensus 194 ~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~ 258 (532)
.|++... .++ -.||.++..+++..|++..
T Consensus 127 ------~~~~~~~--------------------------~~~----~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 127 ------IGGFDEA--------------------------LLS----GEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred ------hCCcchH--------------------------hcC----CcchHHHHHHHHhhccccc
Confidence 4422111 011 1699999999999998764
No 66
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.55 E-value=3.5e-07 Score=94.16 Aligned_cols=178 Identities=13% Similarity=0.080 Sum_probs=112.3
Q ss_pred CCCCCCE-EEEEeCCCChhHHhhhccC-CCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCc-EEEEecCCCCCCc
Q 009524 34 RLDHDTI-LQILIDGRDPNAVDNEGCA-LPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQ-VTLNVDCDMYSNN 110 (532)
Q Consensus 34 ~~dhp~~-v~Vldd~~~~~~~~~~~~~-~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~-~IlvlDaD~~~~~ 110 (532)
.++.+.. |.++|+++.+...+..... .|++.++.-.++ .|=||+-|.+.+... .+++ ++++++-|.++ +
T Consensus 27 ~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~~~~N-----lG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~-~ 98 (305)
T COG1216 27 AQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIENGEN-----LGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV-E 98 (305)
T ss_pred cCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEEcCCC-----ccchhhhhHHHHHHh--cCCCcEEEEEcCCeee-C
Confidence 4444544 3367888887765554444 699999988764 467899999998731 3333 99999999999 7
Q ss_pred hHHHHHHHHHhhcccCCCeEEEEeccceeecCCc-ccccchhhHH---------hHHHHH--hhhhccCCceeeccccee
Q 009524 111 SQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTK-NELYSNSLRI---------YNEVEF--EGMDGYGGPIYCGSGCFH 178 (532)
Q Consensus 111 p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~-nd~~~~~~~~---------~~~~~~--~g~d~~~~~~~~Gtg~~~ 178 (532)
|++|.+++..+.+. +..+.|+.....++... -+..+..... .++... ...+... +.++|.++++
T Consensus 99 ~~~l~~ll~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~li 174 (305)
T COG1216 99 PDLLEELLKAAEED---PAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVV-ASLSGACLLI 174 (305)
T ss_pred hhHHHHHHHHHHhC---CCCeEeeeeEecCCCCcchheeccccccccccceecccccccccccchhhhh-hhcceeeeEE
Confidence 99999999988744 25777765443322110 0111100000 000000 0000000 0478999999
Q ss_pred ehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEE
Q 009524 179 RREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSV 258 (532)
Q Consensus 179 RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~ 258 (532)
||+++.. +|+++.+ +-.-.||++.++|+..+||++.
T Consensus 175 ~~~~~~~--------------vG~~de~------------------------------~F~y~eD~D~~~R~~~~G~~i~ 210 (305)
T COG1216 175 RREAFEK--------------VGGFDER------------------------------FFIYYEDVDLCLRARKAGYKIY 210 (305)
T ss_pred cHHHHHH--------------hCCCCcc------------------------------cceeehHHHHHHHHHHcCCeEE
Confidence 9999998 7644321 1234799999999999999999
Q ss_pred EecCCccccc
Q 009524 259 YCKPERDAFL 268 (532)
Q Consensus 259 y~~~~~~a~~ 268 (532)
|+ |....+.
T Consensus 211 ~~-p~a~i~H 219 (305)
T COG1216 211 YV-PDAIIYH 219 (305)
T ss_pred Ee-eccEEEE
Confidence 99 5444444
No 67
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.35 E-value=8.8e-06 Score=85.11 Aligned_cols=88 Identities=17% Similarity=0.112 Sum_probs=63.8
Q ss_pred CCEEEEEeCCCChhHHhhh---ccC----CCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCc
Q 009524 38 DTILQILIDGRDPNAVDNE---GCA----LPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNN 110 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~---~~~----~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~ 110 (532)
+..|.|+||||+|++.+.. ..+ -+.+.++..+++ .||++|+|.|++. +.||+|+++|||... +
T Consensus 107 ~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N-----~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~ 176 (333)
T PTZ00260 107 KYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN-----KGKGGAVRIGMLA----SRGKYILMVDADGAT-D 176 (333)
T ss_pred CEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC-----CChHHHHHHHHHH----ccCCEEEEEeCCCCC-C
Confidence 4579999999998764422 111 134777766542 5899999999998 789999999999999 7
Q ss_pred hHHHHHHHHHhhcccCCCeEEEEecc
Q 009524 111 SQAVRDALCFFMDEEKGHEFAFVQFP 136 (532)
Q Consensus 111 p~~l~~~~~~f~d~~~~~~va~VQ~p 136 (532)
|+.+.+++..+.+-+ .+..++|.+-
T Consensus 177 ~~~l~~l~~~l~~~~-~~~~dvV~Gs 201 (333)
T PTZ00260 177 IDDFDKLEDIMLKIE-QNGLGIVFGS 201 (333)
T ss_pred HHHHHHHHHHHHHhh-ccCCceEEee
Confidence 999999888776410 0145666553
No 68
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.21 E-value=2.1e-05 Score=81.38 Aligned_cols=88 Identities=17% Similarity=0.195 Sum_probs=61.9
Q ss_pred CCCEEEEEeCCCChhHHhhhccCCCcEEEEEecc-CCC-CCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC-CCchHH
Q 009524 37 HDTILQILIDGRDPNAVDNEGCALPTLVYLAREK-RPQ-YSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY-SNNSQA 113 (532)
Q Consensus 37 hp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rek-rp~-~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~-~~~p~~ 113 (532)
.+..|.|+||+++|++.+.... . ...++.+.+ .+. ....+|++|+|.+++. +++|+|+++|||.. + +|++
T Consensus 61 ~~~EIIVVDDgStD~T~~ia~~-~-~~~v~~~~~~~~~~~~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~-~p~~ 133 (306)
T PRK13915 61 LVDELIVIDSGSTDATAERAAA-A-GARVVSREEILPELPPRPGKGEALWRSLAA----TTGDIVVFVDADLINF-DPMF 133 (306)
T ss_pred CCcEEEEEeCCCccHHHHHHHH-h-cchhhcchhhhhccccCCCHHHHHHHHHHh----cCCCEEEEEeCccccC-CHHH
Confidence 3567899999999886554332 1 112222211 010 1235899999999997 78999999999997 6 7999
Q ss_pred HHHHHHHhh-cccCCCeEEEEec
Q 009524 114 VRDALCFFM-DEEKGHEFAFVQF 135 (532)
Q Consensus 114 l~~~~~~f~-d~~~~~~va~VQ~ 135 (532)
+.+++..+. |+ ++++|.+
T Consensus 134 l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 134 VPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred HHHHHHHHHhCC----CceEEEE
Confidence 999998886 66 5777764
No 69
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.13 E-value=3.3e-06 Score=87.01 Aligned_cols=202 Identities=20% Similarity=0.259 Sum_probs=135.4
Q ss_pred ccccCCCCCCCCCCEEEEEeCCCChhHHh---hhccCCCcE---EEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEE
Q 009524 26 SQWVSYSSRLDHDTILQILIDGRDPNAVD---NEGCALPTL---VYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVT 99 (532)
Q Consensus 26 ~~~~~~~~~~dhp~~v~Vldd~~~~~~~~---~~~~~~p~l---~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~I 99 (532)
..|.+-++.+-|+..+..+-++++|.+.+ .+=.++|++ +++.-|+- + -+-|-.|+=-|.|. +.+|+|
T Consensus 102 ~Nlesffts~Y~~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~v-g--~npKInN~mpgy~~----a~ydlv 174 (431)
T KOG2547|consen 102 HNLESFFTSQYHKYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKV-G--LNPKINNMMPGYRA----AKYDLV 174 (431)
T ss_pred HhHHHHHhhccCceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEccccc-c--cChhhhccCHHHHH----hcCCEE
Confidence 44666678899988866665555555433 222356654 35555552 2 35688888889998 899999
Q ss_pred EEecCCCCCCchHHHHHHHHHhhcccCCCeEEEE-eccceeecCCcccccchhhHHhHHHHHh----hhhccCCceeecc
Q 009524 100 LNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFV-QFPQNFDNVTKNELYSNSLRIYNEVEFE----GMDGYGGPIYCGS 174 (532)
Q Consensus 100 lvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~V-Q~pq~f~n~~~nd~~~~~~~~~~~~~~~----g~d~~~~~~~~Gt 174 (532)
++.|.|-.+ .||.+.++..-|+.++ ++|+| |+|-. .+....|. .-++ ++|...++ .-+-.+-.+..|-
T Consensus 175 lisDsgI~m-~pdtildm~t~M~she---kmalvtq~py~-~dr~Gf~a-tle~-~~fgTsh~r~yl~~n~~~~~c~tgm 247 (431)
T KOG2547|consen 175 LISDSGIFM-KPDTILDMATTMMSHE---KMALVTQTPYC-KDRQGFDA-TLEQ-VYFGTSHPRIYLSGNVLGFNCSTGM 247 (431)
T ss_pred EEecCCeee-cCchHHHHHHhhhccc---ceeeecCCcee-eccccchh-hhhh-eeeccCCceEEEccccccccccccH
Confidence 999999999 7999999999898765 89999 55543 33322111 1111 22222111 1111222345788
Q ss_pred cceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcC
Q 009524 175 GCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQG 254 (532)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~G 254 (532)
.|+.|+++|.+ -||+... | +.+.||+..+-.+..+|
T Consensus 248 s~~mrK~~ld~--------------~ggi~~f---------------------------~---~yLaedyFaaksllSRG 283 (431)
T KOG2547|consen 248 SSMMRKEALDE--------------CGGISAF---------------------------G---GYLAEDYFAAKSLLSRG 283 (431)
T ss_pred HHHHHHHHHHH--------------hccHHHH---------------------------H---HHHHHHHHHHHHHHhhh
Confidence 88999999987 5543211 2 25899999999999999
Q ss_pred CEEEEecCCcccccccCCCCHHHHHHHHHHhcc
Q 009524 255 WKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSE 287 (532)
Q Consensus 255 wrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~ 287 (532)
|++.+..-. +-...+-.+...+..|-.||..
T Consensus 284 ~ksaist~p--alQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 284 WKSAISTHP--ALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred hhhhhcccc--hhhhhhhhHHHHHHHHHHHhhh
Confidence 999998642 3346666788888888888873
No 70
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.82 E-value=0.00022 Score=74.41 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=58.3
Q ss_pred CCEEEEEeCCCChhHHhhh---ccC-CCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHH
Q 009524 38 DTILQILIDGRDPNAVDNE---GCA-LPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQA 113 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~---~~~-~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~ 113 (532)
+..|.|+|||++|.+.+.. ..+ -++++.+..++ ..+|++|+|++++. +++|+++++|||... +|+.
T Consensus 38 ~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~-~p~~ 107 (325)
T PRK10714 38 EYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQN-PPEE 107 (325)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCC-CHHH
Confidence 4578999999988764432 111 24566555443 25899999999998 799999999999999 6999
Q ss_pred HHHHHHHhhc
Q 009524 114 VRDALCFFMD 123 (532)
Q Consensus 114 l~~~~~~f~d 123 (532)
+.+++..+.+
T Consensus 108 i~~l~~~~~~ 117 (325)
T PRK10714 108 IPRLVAKADE 117 (325)
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.54 E-value=0.00029 Score=69.28 Aligned_cols=72 Identities=11% Similarity=0.096 Sum_probs=57.9
Q ss_pred EEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHH
Q 009524 40 ILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALC 119 (532)
Q Consensus 40 ~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~ 119 (532)
.|.|+||++.|.+.+.+.. +++.+++. + ..+++.+.|.|+.. +.+|+|+++|+|..+ +|+.+.++..
T Consensus 28 eiivvD~gStD~t~~i~~~--~~~~v~~~-~-----~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~-~~~~~~~l~~ 94 (229)
T cd02511 28 EIIVVDSGSTDRTVEIAKE--YGAKVYQR-W-----WDGFGAQRNFALEL----ATNDWVLSLDADERL-TPELADEILA 94 (229)
T ss_pred EEEEEeCCCCccHHHHHHH--cCCEEEEC-C-----CCChHHHHHHHHHh----CCCCEEEEEeCCcCc-CHHHHHHHHH
Confidence 6889999999887665442 34555555 2 25799999999998 789999999999999 7999999988
Q ss_pred Hhhcc
Q 009524 120 FFMDE 124 (532)
Q Consensus 120 ~f~d~ 124 (532)
.+.++
T Consensus 95 ~~~~~ 99 (229)
T cd02511 95 LLATD 99 (229)
T ss_pred HHhCC
Confidence 88754
No 72
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=96.92 E-value=0.0074 Score=57.48 Aligned_cols=131 Identities=13% Similarity=0.128 Sum_probs=83.8
Q ss_pred CCEEEEEeCCCChhHHh---hhc--cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchH
Q 009524 38 DTILQILIDGRDPNAVD---NEG--CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQ 112 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~---~~~--~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~ 112 (532)
+..|.|+||++-|.+.+ .++ ...+++....|.+. -+=.-|--+++.+ +.+||+++.|||--- +|.
T Consensus 35 ~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDlsH-hPk 104 (238)
T KOG2978|consen 35 KYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADLSH-HPK 104 (238)
T ss_pred ceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCccCC-Cch
Confidence 56788999998776533 222 12488999888874 4567788889998 899999999999988 799
Q ss_pred HHHHHHHHhhcccCCCeEEEEeccceeecCCcccccc--hhhHHhH-HHHH--hhhhccCCceeecccceeehHhhcc
Q 009524 113 AVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYS--NSLRIYN-EVEF--EGMDGYGGPIYCGSGCFHRREILCG 185 (532)
Q Consensus 113 ~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~--~~~~~~~-~~~~--~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (532)
++-+.+....+- +.++|-.. +|.+.. -.++ --..+.- ...+ +-.-+.+..-.+|+--++|+++|+.
T Consensus 105 ~ipe~i~lq~~~----~~div~GT-RYa~~g--gV~gW~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~~ 175 (238)
T KOG2978|consen 105 FIPEFIRLQKEG----NYDIVLGT-RYAGGG--GVYGWDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLEK 175 (238)
T ss_pred hHHHHHHHhhcc----Ccceeeee-eEcCCC--ceecchhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHHh
Confidence 999988766554 56777543 232211 1111 0001110 0111 1112233445789999999999876
No 73
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=95.93 E-value=0.027 Score=50.71 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=49.4
Q ss_pred CCCCCCC-EEEEEeCCCChhHHhhh---ccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCC
Q 009524 33 SRLDHDT-ILQILIDGRDPNAVDNE---GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYS 108 (532)
Q Consensus 33 ~~~dhp~-~v~Vldd~~~~~~~~~~---~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~ 108 (532)
..|.+++ .|.|+|||++|++.+.. ....+.+.+...++ ..+++.|+|.++.. +.+|+++.+|+|..
T Consensus 26 ~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~----~~~~~~~~~d~d~~- 95 (291)
T COG0463 26 LNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINER-----NGGLGAARNAGLEY----ARGDYIVFLDADDQ- 95 (291)
T ss_pred HhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeeccc-----CCChHHHHHhhHHh----ccCCEEEEEccCCC-
Confidence 3455555 69999999998764322 21112333333332 36899999999998 67799999999999
Q ss_pred CchHHHH
Q 009524 109 NNSQAVR 115 (532)
Q Consensus 109 ~~p~~l~ 115 (532)
..+....
T Consensus 96 ~~~~~~~ 102 (291)
T COG0463 96 HPPELIP 102 (291)
T ss_pred CCHHHHH
Confidence 6455444
No 74
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=95.45 E-value=0.11 Score=54.62 Aligned_cols=126 Identities=12% Similarity=0.121 Sum_probs=73.3
Q ss_pred CCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCC----Cc-----HH----HHHHHHHHcccCCCCcEEEEecC
Q 009524 38 DTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHN----FK-----AG----AMNALIRVSSKISNGQVTLNVDC 104 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~----~K-----AG----ALN~~lr~s~~~s~~~~IlvlDa 104 (532)
|..|+|.+||+++++.+......-.+.++.-+.....+.+ .+ |. |+|.+... .++++++++|-
T Consensus 31 ~~~liIs~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~aln~vF~~----~~~~~vIILED 106 (334)
T cd02514 31 KFPIIVSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWALTQTFNL----FGYSFVIILED 106 (334)
T ss_pred CceEEEEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHHHHHHHHHHHh----cCCCEEEEECC
Confidence 6679999999987654443221113445543221111111 00 23 78888876 68999999999
Q ss_pred CCCCCchHHH---HHHHHHhhcccCCCeEEEEeccceeecCCcccccc-hhhHHhHHHHHhhhhccCCceeecccceeeh
Q 009524 105 DMYSNNSQAV---RDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYS-NSLRIYNEVEFEGMDGYGGPIYCGSGCFHRR 180 (532)
Q Consensus 105 D~~~~~p~~l---~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~-~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR 180 (532)
|..+ .|||+ .+++..+.+. ++|..|.+- |.+...... .....+ ....++.|.|-+.+|
T Consensus 107 Dl~~-sPdFf~yf~~~l~~y~~D---~~v~~ISa~----NdnG~~~~~~~~~~~l----------yrs~ff~glGWml~r 168 (334)
T cd02514 107 DLDI-APDFFSYFQATLPLLEED---PSLWCISAW----NDNGKEHFVDDTPSLL----------YRTDFFPGLGWMLTR 168 (334)
T ss_pred CCcc-CHhHHHHHHHHHHHHhcC---CCEEEEEee----ccCCcccccCCCcceE----------EEecCCCchHHHHHH
Confidence 9999 79955 7777777633 278888652 111000000 000111 123457888888888
Q ss_pred Hhhcc
Q 009524 181 EILCG 185 (532)
Q Consensus 181 ~aL~~ 185 (532)
++..+
T Consensus 169 ~~W~e 173 (334)
T cd02514 169 KLWKE 173 (334)
T ss_pred HHHHH
Confidence 88866
No 75
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=93.16 E-value=0.25 Score=41.60 Aligned_cols=64 Identities=22% Similarity=0.191 Sum_probs=42.0
Q ss_pred EEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCC
Q 009524 40 ILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYS 108 (532)
Q Consensus 40 ~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~ 108 (532)
.++|+||+++|.+.+.+. ++|.+..+.... |-.....+...+|.+.+. ..+++.++.+|||-+.
T Consensus 21 ~i~i~d~~s~D~t~~~l~-~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 21 HIYIYDDGSTDGTREILR-ALPGVGIIRWVD-PYRDERRQRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred EEEEEECCCCccHHHHHH-hCCCcEEEEeCC-CccchHHHHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 488899999988766554 357766666554 321112334455555543 2578999999999887
No 76
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=92.70 E-value=0.39 Score=47.36 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=89.2
Q ss_pred CCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccce
Q 009524 59 ALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQN 138 (532)
Q Consensus 59 ~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~ 138 (532)
.+..-+||.-.... ..--||-.||.|...+....+.++++.-|.|+.| ..+..... | + +.|..
T Consensus 32 ~~~~~i~vi~Q~~~--~~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP-~~~~~~y~-~---~----------~~p~H 94 (219)
T cd00899 32 QLDYRIFVIEQVGN--FRFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLP-ENDRNLYG-C---E----------EGPRH 94 (219)
T ss_pred CCcEEEEEEEecCC--ccchhhhhhhHHHHHHhhcCCccEEEEecccccc-cCcccccc-C---C----------CCCeE
Confidence 34544555543211 2356999999977654322457999999999999 45543321 1 2 11211
Q ss_pred eecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhc
Q 009524 139 FDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKAL 218 (532)
Q Consensus 139 f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v 218 (532)
+.-.- +.+ ....- -.-+.|.+..++|+.+.. ++|++.
T Consensus 95 ~s~~~--~~~--~~~lp------------y~~~~Gg~~~~~k~~f~~--------------VNGf~n------------- 131 (219)
T cd00899 95 LSVPL--DKF--HYKLP------------YKTYFGGVLALTREQFRK--------------VNGFSN------------- 131 (219)
T ss_pred EEEee--ccc--ccccC------------cccccccceeeEHHHHHH--------------hCCcCC-------------
Confidence 11000 000 00000 112567788999999988 666542
Q ss_pred ccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCCcc----cc------cccCCCCHHHHHHHHHHhccc
Q 009524 219 ASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERD----AF------LGVSPTTLLQFLVQRKRWSEG 288 (532)
Q Consensus 219 ~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~----a~------~g~aP~tl~~~l~Qr~RWa~G 288 (532)
..| ||- .||-+++.||..+|.+......... .. ....|.-+.....+++||+..
T Consensus 132 --------~f~----GWG----gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~d 195 (219)
T cd00899 132 --------AYW----GWG----GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSD 195 (219)
T ss_pred --------cCc----cCC----cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccC
Confidence 223 232 5999999999999998766543211 00 122344455556677778777
Q ss_pred chhhH
Q 009524 289 DFQIM 293 (532)
Q Consensus 289 ~lqi~ 293 (532)
.+.-+
T Consensus 196 GLnsl 200 (219)
T cd00899 196 GLNSL 200 (219)
T ss_pred Cccce
Confidence 66444
No 77
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=92.57 E-value=5.4 Score=46.37 Aligned_cols=199 Identities=16% Similarity=0.150 Sum_probs=112.8
Q ss_pred EEeccCCCCCC--CCcHHHHHHHHHHcccCCCCcEEEEecC--CCCCCchHHHHHHHHHhhccc--------------CC
Q 009524 66 LAREKRPQYSH--NFKAGAMNALIRVSSKISNGQVTLNVDC--DMYSNNSQAVRDALCFFMDEE--------------KG 127 (532)
Q Consensus 66 v~Rekrp~~~~--~~KAGALN~~lr~s~~~s~~~~IlvlDa--D~~~~~p~~l~~~~~~f~d~~--------------~~ 127 (532)
+-|-|-||++. .||.-|-|+|+=. +.||++-.+|+ |.|..+-==+|.++.-|.+.. ..
T Consensus 261 ~yri~LpG~pilGeGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~ 336 (817)
T PF02364_consen 261 IYRIKLPGNPILGEGKPENQNHAIIF----TRGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGK 336 (817)
T ss_pred eEEEECCCCCcCCCCCccccceeEEE----EccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCC
Confidence 34555666553 5799999999977 89999999997 444411111222333444211 13
Q ss_pred CeEEEEeccceeecCCcc---cccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHhhhccchhh
Q 009524 128 HEFAFVQFPQNFDNVTKN---ELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKR 204 (532)
Q Consensus 128 ~~va~VQ~pq~f~n~~~n---d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~ 204 (532)
+.++.|-++......+-+ |..+.+-..|--..++-+...++-+.-|+==++.|--... -||..
T Consensus 337 ~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~T--------------RGGvS 402 (817)
T PF02364_consen 337 RPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMTT--------------RGGVS 402 (817)
T ss_pred CCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhheec--------------cCccc
Confidence 466777666554432211 2222332333334555555555445556655555554443 34443
Q ss_pred hhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCCcccccccCC-CCHHHHHHHHH
Q 009524 205 EESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSP-TTLLQFLVQRK 283 (532)
Q Consensus 205 ~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP-~tl~~~l~Qr~ 283 (532)
+.+. |- .+.||+..|+.-.++|-++.+|+-- .+|-.- -.+.+-..=..
T Consensus 403 KAsk-------------------------~l---hLsEDIfaG~n~~lRGG~i~h~ey~---qcGKGRD~Gf~~I~~F~~ 451 (817)
T PF02364_consen 403 KASK-------------------------GL---HLSEDIFAGMNATLRGGRIKHCEYI---QCGKGRDVGFNSILNFET 451 (817)
T ss_pred hHhh-------------------------cc---cccHHHHHHHHHHhcCCceeehhhh---hcccccccCchhhhhhHh
Confidence 3221 22 5899999999999999999998542 224332 23334444456
Q ss_pred HhcccchhhHHhhcCccccccCCcCccceeee
Q 009524 284 RWSEGDFQIMLCRYSPARYAHGKISLGLRLGY 315 (532)
Q Consensus 284 RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y 315 (532)
.=+.|+-|..+||.--.+ | .+|.+-+-|.+
T Consensus 452 KI~~G~GEQ~LSRe~yrL-g-~~ld~~R~LSf 481 (817)
T PF02364_consen 452 KIASGMGEQMLSREYYRL-G-TRLDFFRFLSF 481 (817)
T ss_pred HhcCCccchhhhHHHHHh-h-ccCCHHHHHHH
Confidence 678888888887632111 2 34665555543
No 78
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=87.53 E-value=2.7 Score=42.95 Aligned_cols=76 Identities=20% Similarity=0.125 Sum_probs=53.2
Q ss_pred CCCEEEEEeCCCChhHHhhh-----ccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC--CC
Q 009524 37 HDTILQILIDGRDPNAVDNE-----GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY--SN 109 (532)
Q Consensus 37 hp~~v~Vldd~~~~~~~~~~-----~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~--~~ 109 (532)
....|.|+|||+.|++.+.+ ....-++..+.-.++ .+|+||.-.+.-. +.|+++++.|||-- .+
T Consensus 103 F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~n-----rgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~ 173 (323)
T KOG2977|consen 103 FTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKN-----RGKGGAVRKGMLS----SRGQKILFADADGATKFA 173 (323)
T ss_pred CceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhcc-----CCCCcceehhhHh----ccCceEEEEcCCCCccCC
Confidence 34568999999998864321 112345666655543 5899999988877 79999999999963 33
Q ss_pred chHHHHHHHHHh
Q 009524 110 NSQAVRDALCFF 121 (532)
Q Consensus 110 ~p~~l~~~~~~f 121 (532)
+-+.|.+++.-.
T Consensus 174 d~ekLe~al~~~ 185 (323)
T KOG2977|consen 174 DLEKLEKALNDK 185 (323)
T ss_pred CHHHHHHHHHhh
Confidence 567777777533
No 79
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=81.72 E-value=2 Score=42.29 Aligned_cols=49 Identities=18% Similarity=0.259 Sum_probs=39.5
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHh-hcccCCCeEEEE
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFF-MDEEKGHEFAFV 133 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f-~d~~~~~~va~V 133 (532)
..-+-+.|.|++. ++++|++.+.=|..+.+++++.+++..| .|| ++|.+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 4678899999998 8999999999999998899999999999 677 56666
No 80
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=73.39 E-value=3.4 Score=33.92 Aligned_cols=50 Identities=24% Similarity=0.132 Sum_probs=30.7
Q ss_pred ceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHH
Q 009524 169 PIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGI 248 (532)
Q Consensus 169 ~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~ 248 (532)
+.++|-.+.++|+.+.+ +||++..- .-|| -||.++..
T Consensus 17 ~~~~Gg~~~~~~~~f~~--------------vnGfde~f-------------------~gWG----------~ED~Dl~~ 53 (78)
T PF02709_consen 17 PNFFGGVFAISREDFEK--------------VNGFDERF-------------------WGWG----------GEDDDLYN 53 (78)
T ss_dssp TT---SEEEEEHHHHHH--------------TTSS-SS--------------------TSCS----------SHHHHHHH
T ss_pred CCeeEEEEEEeHHHHHH--------------cCCCCccc-------------------cccC----------ccHHHHHH
Confidence 44788899999999988 76544211 1222 39999999
Q ss_pred HHHHcCCEEEEec
Q 009524 249 SIQCQGWKSVYCK 261 (532)
Q Consensus 249 ~l~~~Gwrs~y~~ 261 (532)
|+..+|.+.....
T Consensus 54 Rl~~~g~~~~~~~ 66 (78)
T PF02709_consen 54 RLWKAGLKIVRVP 66 (78)
T ss_dssp HHHHTT---B-SS
T ss_pred HHHHcCCeEEecC
Confidence 9999999976653
No 81
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=73.21 E-value=30 Score=35.21 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=59.1
Q ss_pred CCCCEEEEEeCCCChh-HHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHH
Q 009524 36 DHDTILQILIDGRDPN-AVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAV 114 (532)
Q Consensus 36 dhp~~v~Vldd~~~~~-~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l 114 (532)
+.-..|.+++.++.-+ .....=..+|++.|+.-...... -.-+-.-|.|...|-...+..+|+.+|+|++. ..|-.
T Consensus 36 ~~~~~vi~~~~~~~~d~~i~~~i~~~~~~~yl~~~s~~~F--~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~-S~dnF 112 (346)
T COG4092 36 SDITMVICLRAHEVMDRLIRSYIDPMPRVLYLDFGSPEPF--ASETICANNGADYSHEKCESNLVLFLDVDCFG-SSDNF 112 (346)
T ss_pred cccEEEEEEecchhHHHHHHHHhccccceEEEecCCCccc--cchhhhhhccchhhhccccccEEEEEeccccc-cHHHH
Confidence 3345566666554211 11111134799999987542111 11133446666654444578999999999999 56666
Q ss_pred HHHHHHhhcccCCCeE-EEEeccceeecCCc
Q 009524 115 RDALCFFMDEEKGHEF-AFVQFPQNFDNVTK 144 (532)
Q Consensus 115 ~~~~~~f~d~~~~~~v-a~VQ~pq~f~n~~~ 144 (532)
.+++..-.-.+....+ |+.--|..+-|...
T Consensus 113 ~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~ 143 (346)
T COG4092 113 AKMLSIATIKKMRTNIDAPLVLPVYHLNKAD 143 (346)
T ss_pred HHHHHHHHHHHHHhccCcceeeeeeecchhh
Confidence 6666433211122245 66667777777543
No 82
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=69.40 E-value=6.3 Score=41.11 Aligned_cols=45 Identities=18% Similarity=0.154 Sum_probs=32.0
Q ss_pred HHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEE
Q 009524 84 NALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFV 133 (532)
Q Consensus 84 N~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~V 133 (532)
|.|++. +..++++++|+|++| .+++-.....+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~p-s~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLP-SPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeee-CcchHHHHHHHhhhhccCCceEEE
Confidence 566665 789999999999999 588777666655432233466776
No 83
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=68.54 E-value=9.1 Score=43.09 Aligned_cols=176 Identities=18% Similarity=0.163 Sum_probs=102.3
Q ss_pred EEEEeCCCChhH-H---hhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHH
Q 009524 41 LQILIDGRDPNA-V---DNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRD 116 (532)
Q Consensus 41 v~Vldd~~~~~~-~---~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~ 116 (532)
|.++||+++.+. . |+.-.+.+.+.++..++| .++-.|.+.+-+. +.||.++.+||-.-+ +...|.-
T Consensus 177 IiLVdD~S~~~~l~~~Ld~y~k~~~~v~i~r~~~R-----~GLIrARl~GA~~----A~geVL~FLDsHcE~-n~gWLeP 246 (578)
T KOG3736|consen 177 IILVDDFSDRDHLKDKLEEYVKRFSKVRILRTKKR-----EGLIRARLLGASM----ATGEVLTFLDSHCEV-NVGWLEP 246 (578)
T ss_pred EEEeecCcchhhhhhhhHHHHhhhcceeEEeecch-----hhhHHHHhhhhhh----hhchheeeeecceeE-ecCcchH
Confidence 667888887542 1 222123445777777775 4678888888876 899999999999999 5899998
Q ss_pred HHHHhh-cccCCCeEEEEeccceeecCCccc-ccch---hhH------HhHH--------HHHhhh--hccCCceeeccc
Q 009524 117 ALCFFM-DEEKGHEFAFVQFPQNFDNVTKNE-LYSN---SLR------IYNE--------VEFEGM--DGYGGPIYCGSG 175 (532)
Q Consensus 117 ~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd-~~~~---~~~------~~~~--------~~~~g~--d~~~~~~~~Gtg 175 (532)
++.-.. |+. ..| +| ....++.+. .|.. ..+ ..|. ...+.. +-+..|...|.-
T Consensus 247 LL~~I~~~r~-----tvv-~P-vID~Id~~tf~y~~~~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGgl 319 (578)
T KOG3736|consen 247 LLARIAEDRK-----TVV-CP-VIDVIDDNTFEYEKQSELMRGGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGGL 319 (578)
T ss_pred HHHHhhhcCc-----eee-cc-eEEeecCcCceecccCccceeeeecceeEEeccCCccHhhcccCCCCCcCCcccCCce
Confidence 886554 431 112 22 122222211 1111 001 1111 111111 334567788999
Q ss_pred ceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhccccccccc-CccccccccCCCCCCChHHHHHHHHHcC
Q 009524 176 CFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETN-TQWGKEIGLKYGCPVEDVITGISIQCQG 254 (532)
Q Consensus 176 ~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~-t~wG~~~G~~~~svtED~~t~~~l~~~G 254 (532)
+.+.|+-+.+ +|+ |+.+ ..||+ |-+++|+|+=.-|
T Consensus 320 FAI~r~yF~e--------------iG~--------------------yD~gMdiwGG----------ENlElSfrvWqCG 355 (578)
T KOG3736|consen 320 FAIDRKYFGE--------------LGS--------------------YDEGMDIWGG----------ENLELSFRVWQCG 355 (578)
T ss_pred EEeeHHHHhh--------------ccC--------------------ccccccccCh----------hhceeeEEEeccC
Confidence 9999999987 663 3333 35653 7888888887666
Q ss_pred CEEEEecC--CcccccccCCCCHHH
Q 009524 255 WKSVYCKP--ERDAFLGVSPTTLLQ 277 (532)
Q Consensus 255 wrs~y~~~--~~~a~~g~aP~tl~~ 277 (532)
-+..-++. .-..|....|-+..+
T Consensus 356 G~lei~PCSrVGHifRk~~pY~~p~ 380 (578)
T KOG3736|consen 356 GRLEIVPCSRVGHIFRKRKPYTFPD 380 (578)
T ss_pred CeEEecCccceeeeeecCCCccCCC
Confidence 55544321 112344556666644
No 84
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=65.18 E-value=32 Score=38.23 Aligned_cols=49 Identities=10% Similarity=0.131 Sum_probs=39.1
Q ss_pred CcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHH
Q 009524 61 PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDA 117 (532)
Q Consensus 61 p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~ 117 (532)
..+.+++.... ...++.||+.+.+.. .+.++++..|-|+.. .+++|.++
T Consensus 314 ~~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f-~~~fL~rc 362 (499)
T PF05679_consen 314 SRIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVF-TSDFLNRC 362 (499)
T ss_pred cceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCccc-CHHHHHHH
Confidence 35777777621 246999999999863 567899999999999 69999986
No 85
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=64.75 E-value=42 Score=35.96 Aligned_cols=41 Identities=5% Similarity=0.002 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 009524 79 KAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMD 123 (532)
Q Consensus 79 KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d 123 (532)
....+-.+++. -+.+++++.|||+=.-+++.+++++..+.+
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~~ 123 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALDK 123 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhhc
Confidence 45667777775 234899999999743368999998876653
No 86
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=63.52 E-value=22 Score=35.82 Aligned_cols=27 Identities=26% Similarity=0.278 Sum_probs=21.7
Q ss_pred CCCcEEEEecCCCCCCchHHHHHHHHHh
Q 009524 94 SNGQVTLNVDCDMYSNNSQAVRDALCFF 121 (532)
Q Consensus 94 s~~~~IlvlDaD~~~~~p~~l~~~~~~f 121 (532)
++.+..+.+|-|+++ +.+-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhC
Confidence 578999999999999 688888887655
No 87
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=60.86 E-value=7.2 Score=41.52 Aligned_cols=160 Identities=21% Similarity=0.236 Sum_probs=87.8
Q ss_pred EEEEeCCCChh-HH---hhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHH
Q 009524 41 LQILIDGRDPN-AV---DNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRD 116 (532)
Q Consensus 41 v~Vldd~~~~~-~~---~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~ 116 (532)
|.++||-++.+ .. |+--...-+++-|-|.++. -|-+|+- ..-+..+.|+.++.+||-+-+ +-+++--
T Consensus 190 ivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~R-------EGLI~aR-SiGA~~atGeV~ifLDAHCEV-ntNWlpP 260 (603)
T KOG3737|consen 190 IVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERR-------EGLIQAR-SIGAQKATGEVLIFLDAHCEV-NTNWLPP 260 (603)
T ss_pred EEEeccCCccHHHHHHHHHHHHHhcCEEEEEecchh-------hhhhhhh-ccchhhccccEEEEEecceee-ecccccc
Confidence 44456655433 32 2211234568888887642 2333321 111223689999999999999 5788776
Q ss_pred HHH-HhhcccCCCeEEEEeccceeecCCccc-----ccchhh---HHhHHH------------HHhhhh----ccCCcee
Q 009524 117 ALC-FFMDEEKGHEFAFVQFPQNFDNVTKNE-----LYSNSL---RIYNEV------------EFEGMD----GYGGPIY 171 (532)
Q Consensus 117 ~~~-~f~d~~~~~~va~VQ~pq~f~n~~~nd-----~~~~~~---~~~~~~------------~~~g~d----~~~~~~~ 171 (532)
++. .-.|. +|.-|- ....++.|. .|+..+ +-.|+. .++-+. -..+|..
T Consensus 261 LlAPI~rdR----tvmTVP---~IDgId~n~~EyrpvyG~dn~h~rGifeWgmLyKe~~~t~rE~r~RkhnsePyRSPth 333 (603)
T KOG3737|consen 261 LLAPISRDR----TVMTVP---LIDGIDGNTYEYRPVYGGDNDHARGIFEWGMLYKEVPLTPREKRLRKHNSEPYRSPTH 333 (603)
T ss_pred cccccccCc----eEEEEe---eeeeecCCceEEeeccCCcchhhcchhhhhheeccCCCCHHHHHhhhccCCCCCCccc
Confidence 653 33454 566552 334444432 122221 222221 111111 1234556
Q ss_pred ecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhccccccccc-CccccccccCCCCCCChHHHHHHH
Q 009524 172 CGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETN-TQWGKEIGLKYGCPVEDVITGISI 250 (532)
Q Consensus 172 ~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~-t~wG~~~G~~~~svtED~~t~~~l 250 (532)
.|-=|.+.|+-+.+ .| .|+.+ ..||+ |.+++++++
T Consensus 334 AGGLfAInRe~F~E--------------LG--------------------~YDpgLqiWGG----------EnfElSfKI 369 (603)
T KOG3737|consen 334 AGGLFAINREFFFE--------------LG--------------------LYDPGLQIWGG----------ENFELSFKI 369 (603)
T ss_pred ccceeeehHHHHHH--------------hc--------------------cCCCcceeecC----------cceeEEEEE
Confidence 77777788877766 33 13222 46763 788999999
Q ss_pred HHcCCEEEEe
Q 009524 251 QCQGWKSVYC 260 (532)
Q Consensus 251 ~~~Gwrs~y~ 260 (532)
-.-|-++.|+
T Consensus 370 WQCGG~i~fV 379 (603)
T KOG3737|consen 370 WQCGGKILFV 379 (603)
T ss_pred EeeCCEEEEE
Confidence 8888888887
No 88
>PLN03153 hypothetical protein; Provisional
Probab=59.04 E-value=51 Score=36.72 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=24.2
Q ss_pred CCCCcEEEEecCCCCCCchHHHHHHHHHhhcc
Q 009524 93 ISNGQVTLNVDCDMYSNNSQAVRDALCFFMDE 124 (532)
Q Consensus 93 ~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~ 124 (532)
..+.+..+++|.|++++ ++-|.+.+.-+ |+
T Consensus 208 ~pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dp 237 (537)
T PLN03153 208 LPDVRWFVLGDDDTIFN-ADNLVAVLSKY-DP 237 (537)
T ss_pred CCCCCEEEEecCCcccc-HHHHHHHHhhc-CC
Confidence 37889999999999994 77787777655 55
No 89
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=55.48 E-value=69 Score=29.36 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=33.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhh
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFM 122 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~ 122 (532)
.+-+.++..|++... .+.|.+++++||+ .+ +++.+++++..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLV-TAETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCC-CHHHHHHHHHHHH
Confidence 467888888888732 1478999999999 56 6899999887765
No 90
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=52.01 E-value=73 Score=29.48 Aligned_cols=54 Identities=7% Similarity=0.023 Sum_probs=37.2
Q ss_pred cEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 62 TLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 62 ~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
++.++.++. + ..+-++++-.+++. ..+.+.+++++||+ .+ +++.+++++..+.+
T Consensus 63 ~v~~v~~~~-~---~~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 117 (188)
T TIGR03310 63 NITLVHNPQ-Y---AEGQSSSIKLGLEL---PVQSDGYLFLLGDQPFV-TPDIIQLLLEAFAL 117 (188)
T ss_pred CeEEEECcC-h---hcCHHHHHHHHhcC---CCCCCEEEEEeCCcCCC-CHHHHHHHHHHHHh
Confidence 466665543 2 23556677777762 14578999999999 45 68999998877653
No 91
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=51.18 E-value=1.4e+02 Score=28.51 Aligned_cols=55 Identities=11% Similarity=0.100 Sum_probs=39.1
Q ss_pred CcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 61 PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 61 p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
..+.++.++. ..+.++++-.++.... .+.+.+++++||+ .. +++.+.+++..+.+
T Consensus 62 ~~~~~~~~~~-----~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~-~~~~i~~l~~~~~~ 117 (229)
T cd02540 62 PNVEFVLQEE-----QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLI-TPETLQRLLEAHRE 117 (229)
T ss_pred CCcEEEECCC-----CCCCHHHHHHHHHhhc--cCCCeEEEEeCCcccc-CHHHHHHHHHHHHh
Confidence 3466666543 2468999988888631 1368899999999 55 57888888877754
No 92
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=41.36 E-value=1.1e+02 Score=28.34 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=33.3
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHh
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFF 121 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f 121 (532)
.+-.+++..+++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 69 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 69 KGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 4677899999987 4579999999999432699999888766
No 93
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=39.58 E-value=77 Score=30.10 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=35.2
Q ss_pred CCCcEEEEEeccCCCCCCCCcH-HHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHH
Q 009524 59 ALPTLVYLAREKRPQYSHNFKA-GAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCF 120 (532)
Q Consensus 59 ~~p~l~yv~Rekrp~~~~~~KA-GALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~ 120 (532)
++-.++...-++.-. +...|. .+++.+.+.. .+.+|++-.|=|+++ +++.|.+.+.-
T Consensus 47 ~y~Dil~~d~~D~y~-nlt~K~~~~~~w~~~~c---~~~~~v~k~DDD~~v-n~~~l~~~L~~ 104 (195)
T PF01762_consen 47 KYGDILQGDFVDSYR-NLTLKTLAGLKWASKHC---PNAKYVLKVDDDVFV-NPDRLVSFLKS 104 (195)
T ss_pred hcCceEeeecccccc-hhhHHHHHHHHHHHhhC---CchhheeecCcEEEE-ehHHhhhhhhh
Confidence 344566555543221 222343 4567777653 568999999999999 57766665543
No 94
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=36.12 E-value=2.7e+02 Score=26.17 Aligned_cols=42 Identities=14% Similarity=0.100 Sum_probs=30.5
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDE 124 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~ 124 (532)
.+-++++-.+++. .+.+.+++++||++. +++ +.+++..+..+
T Consensus 81 ~G~~~~l~~a~~~----~~~~~~lv~~~D~~~-~~~-~~~~l~~~~~~ 122 (223)
T cd06915 81 LGTGGAIKNALPK----LPEDQFLVLNGDTYF-DVD-LLALLAALRAS 122 (223)
T ss_pred CcchHHHHHHHhh----cCCCCEEEEECCccc-CCC-HHHHHHHHHhC
Confidence 5678888888876 345678999999988 455 66777766543
No 95
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=34.72 E-value=47 Score=40.94 Aligned_cols=180 Identities=17% Similarity=0.135 Sum_probs=95.1
Q ss_pred eccCCCCC--CCCcHHHHHHHHHHcccCCCCcEEEEecC--CCCCCchHHHHHHHHHhhccc-CCCeEEEEeccceeecC
Q 009524 68 REKRPQYS--HNFKAGAMNALIRVSSKISNGQVTLNVDC--DMYSNNSQAVRDALCFFMDEE-KGHEFAFVQFPQNFDNV 142 (532)
Q Consensus 68 Rekrp~~~--~~~KAGALN~~lr~s~~~s~~~~IlvlDa--D~~~~~p~~l~~~~~~f~d~~-~~~~va~VQ~pq~f~n~ 142 (532)
|-|-||.+ .-||..|-|+|+-. +.||++=.+|+ |+|..+.==+|.++.-|.... ..+.++.+-........
T Consensus 1039 rIkLpG~pilGeGKpeNQNhaiiF----tRGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~ 1114 (1679)
T KOG0916|consen 1039 RIKLPGPPILGEGKPENQNHAIIF----TRGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTG 1114 (1679)
T ss_pred EEeCCCCCcCCCCCCcccCceeee----ecchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecC
Confidence 44445544 36799999999987 89999999997 555521112233344454221 22345555444332221
Q ss_pred Ccc---cccchhhHHhHHHHHhhhhccCC-ceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhc
Q 009524 143 TKN---ELYSNSLRIYNEVEFEGMDGYGG-PIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKAL 218 (532)
Q Consensus 143 ~~n---d~~~~~~~~~~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v 218 (532)
+-+ |..+++-..|-..-++-+...++ -+.-|.=-++.|-..-- -||..+.+.
T Consensus 1115 svssLa~fms~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~T--------------RGGvSKAsk---------- 1170 (1679)
T KOG0916|consen 1115 SVSSLAWFMSGQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHIT--------------RGGVSKASK---------- 1170 (1679)
T ss_pred CchHHHHHHccCccchhhHHHHHhccccceeeecCCCcHhhhhhhhc--------------cccchHhhc----------
Confidence 111 22223322333333444554444 34556666666632222 344332221
Q ss_pred ccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCCcccccccCC-CCHHHHHHHHHHhcccchhhHHhh
Q 009524 219 ASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSP-TTLLQFLVQRKRWSEGDFQIMLCR 296 (532)
Q Consensus 219 ~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP-~tl~~~l~Qr~RWa~G~lqi~~~~ 296 (532)
|- .+.||+..|+.-..+|-++.+|+-- ..|-.- -.+.+-..=-..=+.|+-|-.+||
T Consensus 1171 ---------------~i---nlsEDIfAG~n~tlRgG~itH~EYi---QvGKGRDvGlnqI~~FeaKia~G~GEQ~LSR 1228 (1679)
T KOG0916|consen 1171 ---------------GI---NLSEDIFAGFNATLRGGNITHHEYI---QVGKGRDVGLNQISNFEAKIANGNGEQTLSR 1228 (1679)
T ss_pred ---------------cc---ccchHhhhhhhHHhhCCCcccceee---ecccccccCcchhhhhhhhhcCCCcchhhhH
Confidence 22 4899999999999999998888521 112211 112222222344577888777776
No 96
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=34.04 E-value=86 Score=29.48 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=32.6
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
+-.+++..+++. .+.+.+++++||+ .+ +++.+++++..+.+
T Consensus 75 g~~~~i~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 116 (193)
T PRK00317 75 GPLAGILAGLKQ----ARTEWVLVVPCDTPFI-PPDLVARLAQAAGK 116 (193)
T ss_pred CCHHHHHHHHHh----cCCCeEEEEcCCcCCC-CHHHHHHHHHhhhc
Confidence 456778888875 5679999999999 55 79999998876643
No 97
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=33.60 E-value=2.5e+02 Score=26.37 Aligned_cols=42 Identities=19% Similarity=0.186 Sum_probs=31.7
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDE 124 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~ 124 (532)
.+-++++-.++.. -+.+.+++++||++. +.+ +.+++.++.+.
T Consensus 81 ~g~~~al~~~~~~----~~~~~~lv~~~D~~~-~~~-~~~~~~~~~~~ 122 (217)
T cd04181 81 LGTAGAVRNAEDF----LGDDDFLVVNGDVLT-DLD-LSELLRFHREK 122 (217)
T ss_pred CccHHHHHHhhhh----cCCCCEEEEECCeec-CcC-HHHHHHHHHhc
Confidence 4678999888886 256789999999998 566 56667666544
No 98
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=33.57 E-value=92 Score=28.88 Aligned_cols=42 Identities=17% Similarity=0.137 Sum_probs=33.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
.+-.+++-.+++. .+.+.+++++||+ .+ +++.+++++..+.+
T Consensus 73 ~g~~~si~~al~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 115 (186)
T TIGR02665 73 PGPLAGILAGLRW----AGTDWVLTVPCDTPFL-PEDLVARLAAALEA 115 (186)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEecCCCcC-CHHHHHHHHHHhhc
Confidence 5677888888886 3568999999999 67 69999998877753
No 99
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=31.16 E-value=53 Score=34.91 Aligned_cols=106 Identities=17% Similarity=0.192 Sum_probs=57.9
Q ss_pred CCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecC-----C---cccc
Q 009524 76 HNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNV-----T---KNEL 147 (532)
Q Consensus 76 ~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~-----~---~nd~ 147 (532)
+++|+-+|=-++-.. .....+||..+|||.|+ |.++.+-+.-|.- ..+.-|+|...-.+ + .+..
T Consensus 142 R~GKgEGMiiG~lLA-k~~g~~YVGFiDADNyi--PGaV~EYvk~yAA-----Gf~ma~spytMVRi~W~~KPKv~~~~l 213 (393)
T PRK14503 142 RSGKGEGMIIGLLLA-KALGARYVGFVDADNYI--PGAVNEYVKIYAA-----GFLMAESPYTMVRIHWRYKPKVTEDRL 213 (393)
T ss_pred ecCcchHHHHHHHHH-HHhCCCeEeEeecccCC--CchHHHHHHHHHh-----hhcccCCCCceEEEEecCCCceecCeE
Confidence 578888886555431 12578999999999999 6888876654432 12333333221111 1 1222
Q ss_pred c----chhhHHhHH---HHHhhhhccCCce-eecccc--eeehHhhccCCCC
Q 009524 148 Y----SNSLRIYNE---VEFEGMDGYGGPI-YCGSGC--FHRREILCGRKYD 189 (532)
Q Consensus 148 ~----~~~~~~~~~---~~~~g~d~~~~~~-~~Gtg~--~~RR~aL~~~~~~ 189 (532)
| |..-++.++ ...+...++..++ -+|++. ..||+.++.+++.
T Consensus 214 yF~k~GRvSel~nr~LN~l~~~~~gf~t~li~TGNAGEhAmt~~La~~l~f~ 265 (393)
T PRK14503 214 YFRKWGRVSEITNRYLNQLISEYTGFETDIIKTGNAGEHAMTMKLAEIMPFS 265 (393)
T ss_pred EEecCcchhHHHHHHHHHHHhhhccccccceecCCchhhHhhHHHHHhCCCC
Confidence 2 332233333 2334455555554 355554 6788888876553
No 100
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=30.87 E-value=54 Score=34.62 Aligned_cols=44 Identities=18% Similarity=0.128 Sum_probs=31.7
Q ss_pred CCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHh
Q 009524 75 SHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFF 121 (532)
Q Consensus 75 ~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f 121 (532)
=+++|+-.|=-++-... ....+||..+|||.|+ |.++.+-+.-|
T Consensus 140 VR~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~y 183 (381)
T TIGR02460 140 VRSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIY 183 (381)
T ss_pred eecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHH
Confidence 35788888865554311 2578999999999999 68888766443
No 101
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=28.37 E-value=3.4e+02 Score=29.08 Aligned_cols=73 Identities=5% Similarity=-0.007 Sum_probs=44.5
Q ss_pred EEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHH
Q 009524 40 ILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDAL 118 (532)
Q Consensus 40 ~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~ 118 (532)
.|.|+-....+...+..+. . .+.++.++. + .+-++++-.++... .+.|.+++++||+ +. +++.+.+++
T Consensus 45 ~iiiv~~~~~~~i~~~~~~-~-~i~~~~~~~-~----~G~~~ai~~a~~~l---~~~~~~lv~~~D~p~i-~~~~~~~l~ 113 (451)
T TIGR01173 45 KIHVVYGHGAEQVRKALAN-R-DVNWVLQAE-Q----LGTGHAVLQALPFL---PDDGDVLVLYGDVPLI-SAETLERLL 113 (451)
T ss_pred eEEEEECCCHHHHHHHhcC-C-CcEEEEcCC-C----CchHHHHHHHHHhc---CCCCcEEEEECCcCCc-CHHHHHHHH
Confidence 3444433333334444442 2 455654322 2 35788888887762 3447899999999 56 588899888
Q ss_pred HHhhc
Q 009524 119 CFFMD 123 (532)
Q Consensus 119 ~~f~d 123 (532)
..+.+
T Consensus 114 ~~~~~ 118 (451)
T TIGR01173 114 EAHRQ 118 (451)
T ss_pred HHHhh
Confidence 77754
No 102
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=26.78 E-value=3.7e+02 Score=25.55 Aligned_cols=40 Identities=13% Similarity=0.128 Sum_probs=29.0
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhh
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFM 122 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~ 122 (532)
.+-++++..++... +.+.++++.||++. +.++ .+++..+.
T Consensus 82 ~g~~~~l~~~~~~~----~~~~~lv~~~D~i~-~~~~-~~~~~~~~ 121 (221)
T cd06422 82 LETGGGIKKALPLL----GDEPFLVVNGDILW-DGDL-APLLLLHA 121 (221)
T ss_pred cccHHHHHHHHHhc----CCCCEEEEeCCeee-CCCH-HHHHHHHH
Confidence 35689999998873 33678999999998 5764 44565554
No 103
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.10 E-value=5.9e+02 Score=24.37 Aligned_cols=51 Identities=10% Similarity=0.154 Sum_probs=31.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHH
Q 009524 472 YVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVC 525 (532)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~ 525 (532)
.+..|...++-.+.+...++.-.-.++.|+ ++.|+|..+..++..++.+.|
T Consensus 77 Fal~~TlGnll~i~sf~fLmGP~~ql~~m~---~p~Rl~~T~~~l~~~~~Tly~ 127 (175)
T KOG2887|consen 77 FALLYTLGNLLAIGSFAFLMGPVSQLKHMF---SPERLPATLSYLATMVLTLYV 127 (175)
T ss_pred eehhHHHHHHHHHHHHHHHHhHHHHHHHhc---ChhHHHHHHHHHHHHHHHHHH
Confidence 344677667666665555566667788888 445788766665544444333
No 104
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=25.89 E-value=94 Score=33.03 Aligned_cols=41 Identities=24% Similarity=0.145 Sum_probs=26.8
Q ss_pred CCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHH
Q 009524 76 HNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALC 119 (532)
Q Consensus 76 ~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~ 119 (532)
+++|+-.|=-++-... ....+||..+|||.+. |.++.+-+.
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk 181 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVK 181 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHH
Confidence 5789988876655321 2678999999999999 788877554
No 105
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=24.79 E-value=2e+02 Score=25.83 Aligned_cols=54 Identities=13% Similarity=0.178 Sum_probs=38.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhcccCCCeEEEEecc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMDEEKGHEFAFVQFP 136 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d~~~~~~va~VQ~p 136 (532)
.+=+.+|=.+++.. .+.+.++++-||+ .+ +++.+++++..+.+. +..++++.++
T Consensus 70 ~G~~~sl~~a~~~~---~~~~~vlv~~~D~p~~-~~~~l~~l~~~~~~~--~~~i~~~~~~ 124 (160)
T PF12804_consen 70 QGPLASLLAALSQL---PSSEPVLVLPCDQPFL-SPELLRRLLEALEKS--PADIVVPVFR 124 (160)
T ss_dssp CSHHHHHHHHHHTS---TTSSEEEEEETTETTS--HHHHHHHHHHHHHT--TTSEEEEEET
T ss_pred CChHHHHHHHHHhc---ccCCCcEEEeCCcccc-CHHHHHHHHHHHhcc--CCcEEEEEEC
Confidence 46677777777751 2789999999999 46 699999999887632 2367766554
No 106
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=24.79 E-value=2.8e+02 Score=29.75 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=72.7
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhh--HH
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL--RI 154 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~--~~ 154 (532)
...|-||-.+-+.. .+--++...|.|.+. ..+||.++- . +-..|++|- +|..|.--++.-.|++.- ..
T Consensus 298 FSRa~aL~vGAe~~---~~nvLLFfcDVDi~F-T~efL~rcr--~-Nt~~gkqiy---fPivFS~ynp~ivy~~~~~~p~ 367 (494)
T KOG3588|consen 298 FSRAKALMVGAETL---NANVLLFFCDVDIYF-TTEFLNRCR--L-NTILGKQIY---FPIVFSQYNPEIVYEQDKPLPA 367 (494)
T ss_pred hhhhHHHHhhHHHh---ccceeEEEeccceee-hHHHHHHHh--h-ccCCCceEE---EEEEEeecCcceeecCCCCCch
Confidence 34677777777762 233466778999999 699998762 1 222234443 233333323322222110 11
Q ss_pred hHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccc
Q 009524 155 YNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIG 234 (532)
Q Consensus 155 ~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G 234 (532)
+......+..|+--.+--|-.|.||-+.+. +|||+.+- .|
T Consensus 368 e~~~~~~~~tGfwRdfGfGmtc~yrsd~~~---------------vgGFD~~I-------------------------~G 407 (494)
T KOG3588|consen 368 EQQLVIKKDTGFWRDFGFGMTCQYRSDFLT---------------VGGFDMEI-------------------------KG 407 (494)
T ss_pred hHheeeccccccccccCCceeEEeecccee---------------ecCcceee-------------------------ec
Confidence 111111122222223446778899888776 78776321 24
Q ss_pred cCCCCCCChHHHHHHHHHcCCEEEEe
Q 009524 235 LKYGCPVEDVITGISIQCQGWKSVYC 260 (532)
Q Consensus 235 ~~~~svtED~~t~~~l~~~Gwrs~y~ 260 (532)
|- .||+++=-+-...|-+++=.
T Consensus 408 WG----~EDV~Ly~K~v~~~l~viR~ 429 (494)
T KOG3588|consen 408 WG----GEDVDLYRKYVHSGLKVIRT 429 (494)
T ss_pred cC----cchHHHHHHHHhcCcEEEec
Confidence 42 49999998888888887655
No 107
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=24.76 E-value=2.2e+02 Score=30.39 Aligned_cols=55 Identities=18% Similarity=0.462 Sum_probs=33.7
Q ss_pred CcEEEEEeccCCCCCC-------CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHH
Q 009524 61 PTLVYLAREKRPQYSH-------NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDA 117 (532)
Q Consensus 61 p~l~yv~Rekrp~~~~-------~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~ 117 (532)
+.++|+.=+..|.... ...-.+|+.+++..+ +..+|+|++-|.|.+| +|+.|..+
T Consensus 138 ~KIiy~~l~~~~~~g~~~~w~~E~~qR~~l~~l~~~~~-~~~dDliivSDvDEIP-~p~~l~~L 199 (356)
T PF04724_consen 138 DKIIYVTLDDPPEKGRKDPWDRENYQRNALNGLLRLAG-IQDDDLIIVSDVDEIP-SPETLKFL 199 (356)
T ss_pred cceEEEEecCcCCCCCCchhHHHHHHHHHHHHHhhhcC-CCCCCEEEEcCccccc-CHHHHHHH
Confidence 4577776554432111 112234554544422 4678999999999999 69877754
No 108
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.61 E-value=1.2e+02 Score=26.05 Aligned_cols=27 Identities=26% Similarity=0.373 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhhhhhhcccCCCCCcch
Q 009524 486 CSALVLINWPLYQGLFLRKDNGKMPSS 512 (532)
Q Consensus 486 ~~~~v~~~~P~~~gl~~r~~k~~~p~~ 512 (532)
++.+++=-||+|..=-+++.+..+|.+
T Consensus 63 t~li~LPpwP~y~rn~LkW~~Pa~ess 89 (101)
T KOG4112|consen 63 TLLITLPPWPWYRRNPLKWAQPAIESS 89 (101)
T ss_pred HHHhcCCCchhhhcCcccccCCccccc
Confidence 333333358988654445544444433
No 109
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=24.26 E-value=6.7e+02 Score=24.41 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCcccchhhHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCcc
Q 009524 449 STLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPS 511 (532)
Q Consensus 449 ~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~ 511 (532)
..|+++.+++++-|+.-++......-..-.+++..+..+|.+.+.|=+.-.+. .|+++.|.
T Consensus 100 ssLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~--ad~sqr~~ 160 (226)
T COG4858 100 SSLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMR--ADNSQRPG 160 (226)
T ss_pred ccHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhh--cccccCCc
Confidence 44677788888888888876421000111222233334454444444433332 26666664
No 110
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=23.19 E-value=3.3e+02 Score=25.94 Aligned_cols=42 Identities=12% Similarity=0.046 Sum_probs=32.2
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMD 123 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d 123 (532)
+=.+++-.+++. .+.+++++++||+-.-+++.+++++..+.+
T Consensus 79 G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 120 (200)
T PRK02726 79 GPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLEN 120 (200)
T ss_pred ChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhhc
Confidence 445677777775 456899999999976679999988876643
No 111
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=22.22 E-value=6e+02 Score=24.69 Aligned_cols=59 Identities=7% Similarity=-0.015 Sum_probs=41.1
Q ss_pred CCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEe
Q 009524 76 HNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQ 134 (532)
Q Consensus 76 ~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ 134 (532)
.-+...++-+++.......+.+.|++++||+=.-+++.+.+++..|.+.+.+.-+.++.
T Consensus 75 ~~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~ 133 (222)
T TIGR03584 75 FTGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTS 133 (222)
T ss_pred CCCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeec
Confidence 34567778888875321134789999999998878999999998887542333444444
No 112
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=22.22 E-value=2.6e+02 Score=28.19 Aligned_cols=54 Identities=17% Similarity=0.071 Sum_probs=33.0
Q ss_pred CcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHH
Q 009524 61 PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALC 119 (532)
Q Consensus 61 p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~ 119 (532)
+.+.++.-+. + .+-|+|+-.++.......+.+.++++-+||+.++.+.+.+++.
T Consensus 73 ~~~~ii~ep~-~----~gTa~ai~~a~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l~ 126 (274)
T cd02509 73 PEENIILEPE-G----RNTAPAIALAALYLAKRDPDAVLLVLPSDHLIEDVEAFLKAVK 126 (274)
T ss_pred CCceEEECCC-C----CCcHHHHHHHHHHHHhcCCCCeEEEecchhcccCHHHHHHHHH
Confidence 5556654322 2 4678888766664321124579999999999955454544543
No 113
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=21.96 E-value=3.4e+02 Score=26.75 Aligned_cols=42 Identities=5% Similarity=0.116 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 79 KAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 79 KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
.....-+||+... .+.++|++-||=- .+ .++.+.+++....+
T Consensus 77 R~~SV~ngL~~l~--~~~d~VlIHDaaRPfv-~~~~i~~~i~~~~~ 119 (221)
T PF01128_consen 77 RQESVYNGLKALA--EDCDIVLIHDAARPFV-SPELIDRVIEAARE 119 (221)
T ss_dssp HHHHHHHHHHCHH--CTSSEEEEEETTSTT---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--cCCCEEEEEccccCCC-CHHHHHHHHHHHHh
Confidence 4445555666421 3449999999943 55 58899998877754
No 114
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=21.80 E-value=5.5e+02 Score=27.53 Aligned_cols=43 Identities=12% Similarity=-0.047 Sum_probs=32.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
.+-++++-.++... .+.+.++++++|+ +. +++.+++++.++.+
T Consensus 73 ~g~~~ai~~a~~~l---~~~~~vlv~~gD~p~i-~~~~i~~l~~~~~~ 116 (448)
T PRK14357 73 LGTAHAVMCARDFI---EPGDDLLILYGDVPLI-SENTLKRLIEEHNR 116 (448)
T ss_pred CChHHHHHHHHHhc---CcCCeEEEEeCCcccC-CHHHHHHHHHHHHh
Confidence 46789998888762 2357899999998 45 57778888887754
No 115
>PF13779 DUF4175: Domain of unknown function (DUF4175)
Probab=20.94 E-value=2e+02 Score=34.11 Aligned_cols=27 Identities=11% Similarity=-0.104 Sum_probs=23.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009524 441 ASSMFTILSTLALLNLFCMIGAVKKVI 467 (532)
Q Consensus 441 ~~p~~~p~~~l~~l~l~alv~g~~~~~ 467 (532)
.+|.++|+.+++.+-++..+.|++..+
T Consensus 3 ~wp~~~p~~~v~~lflal~~lGl~~~l 29 (820)
T PF13779_consen 3 LWPALWPLLSVLALFLALSWLGLWDLL 29 (820)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 478899999999999999999998875
Done!