Query 009524
Match_columns 532
No_of_seqs 323 out of 1814
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 07:08:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009524.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009524hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 5.1E-39 1.7E-43 367.8 34.8 389 33-507 164-580 (802)
2 3bcv_A Putative glycosyltransf 99.4 5.9E-13 2E-17 128.4 10.6 163 34-261 29-218 (240)
3 2z86_A Chondroitin synthase; G 99.4 2E-12 6.9E-17 143.3 14.6 177 38-275 123-335 (625)
4 1qg8_A Protein (spore coat pol 99.4 4.5E-13 1.6E-17 130.6 7.4 202 33-289 24-236 (255)
5 1xhb_A Polypeptide N-acetylgal 99.3 1.6E-11 5.3E-16 131.6 15.1 205 34-300 54-300 (472)
6 2z86_A Chondroitin synthase; G 99.3 1.2E-11 4.2E-16 136.9 11.5 194 32-293 397-598 (625)
7 2d7i_A Polypeptide N-acetylgal 99.2 1.4E-11 4.9E-16 135.7 11.0 200 35-296 138-375 (570)
8 2ffu_A Ppgalnact-2, polypeptid 99.2 2.1E-11 7.2E-16 131.8 11.5 219 35-315 92-353 (501)
9 3ckj_A Putative uncharacterize 98.9 1.3E-09 4.5E-14 111.6 9.1 91 33-136 71-169 (329)
10 4fix_A UDP-galactofuranosyl tr 98.9 1.8E-09 6.3E-14 120.8 10.7 190 39-285 213-438 (657)
11 3l7i_A Teichoic acid biosynthe 98.8 3.1E-10 1E-14 128.4 0.0 169 32-263 24-200 (729)
12 2fy7_A Beta-1,4-galactosyltran 98.6 1.8E-08 6.1E-13 101.7 4.7 136 77-293 111-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 98.4 2.3E-06 7.9E-11 89.8 13.9 85 38-135 126-216 (387)
14 2nxv_A ATP synthase subunits r 98.4 6.1E-07 2.1E-11 88.0 7.9 49 77-134 60-113 (249)
15 2bo4_A Mannosylglycerate synth 97.8 9.1E-05 3.1E-09 77.9 12.4 78 39-122 29-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 95.0 0.032 1.1E-06 58.2 6.7 41 76-119 142-182 (394)
17 1fo8_A Alpha-1,3-mannosyl-glyc 92.6 0.28 9.5E-06 50.3 8.3 91 37-135 31-138 (343)
18 2wvl_A Mannosyl-3-phosphoglyce 90.9 0.77 2.6E-05 47.2 9.2 83 34-119 75-181 (391)
19 3lw6_A FI08434P, beta-4-galact 65.6 11 0.00037 37.3 6.6 157 59-293 81-250 (287)
20 3d5n_A Q97W15_sulso; NESG, SSR 50.7 48 0.0016 30.0 8.1 40 78-121 72-112 (197)
21 3q80_A 2-C-methyl-D-erythritol 48.6 38 0.0013 31.9 7.3 45 79-123 83-127 (231)
22 2wee_A MOBA-related protein; u 45.6 56 0.0019 29.0 7.6 41 77-120 79-120 (197)
23 2j0a_A Beta-1,3-N-acetylglucos 44.7 50 0.0017 32.2 7.6 30 94-125 92-121 (280)
24 2waw_A MOBA relate protein; un 34.2 1.3E+02 0.0043 26.5 8.1 42 77-120 79-120 (199)
25 3k8d_A 3-deoxy-manno-octuloson 33.3 2.4E+02 0.0083 26.8 10.4 45 77-124 90-135 (264)
26 2xwl_A 2-C-methyl-D-erythritol 33.1 69 0.0024 29.0 6.2 40 78-121 78-118 (223)
27 4fce_A Bifunctional protein GL 32.2 1E+02 0.0036 31.4 8.0 43 77-123 83-126 (459)
28 2yc3_A 2-C-methyl-D-erythritol 30.8 1.5E+02 0.0052 26.8 8.2 43 78-123 82-125 (228)
29 2y6p_A 3-deoxy-manno-octuloson 30.7 54 0.0018 30.1 5.0 42 77-124 72-114 (234)
30 3juk_A UDP-glucose pyrophospho 30.6 1.2E+02 0.0041 28.7 7.7 43 77-124 106-152 (281)
31 3rsb_A Adenosylcobinamide-phos 27.1 29 0.00099 31.1 2.3 40 78-123 79-119 (196)
32 2c0n_A A197; thermophil protei 26.4 48 0.0016 31.0 3.6 24 94-118 52-78 (203)
33 3oam_A 3-deoxy-manno-octuloson 24.7 3.2E+02 0.011 25.4 9.5 45 77-124 74-119 (252)
34 3tqd_A 3-deoxy-manno-octuloson 23.2 2.4E+02 0.0084 26.7 8.3 43 78-123 82-125 (256)
35 1e5k_A Molybdopterin-guanine d 23.2 79 0.0027 28.6 4.6 39 77-120 77-116 (201)
36 1i52_A 4-diphosphocytidyl-2-C- 22.4 3.3E+02 0.011 24.7 9.0 43 78-123 84-126 (236)
37 2vsh_A TARI, 2-C-methyl-D-eryt 20.7 99 0.0034 28.1 4.8 45 78-123 85-133 (236)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=5.1e-39 Score=367.81 Aligned_cols=389 Identities=20% Similarity=0.276 Sum_probs=287.5
Q ss_pred CCCCCCC---EEEEEeCCCChhHHhh---------------hc--cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHccc
Q 009524 33 SRLDHDT---ILQILIDGRDPNAVDN---------------EG--CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSK 92 (532)
Q Consensus 33 ~~~dhp~---~v~Vldd~~~~~~~~~---------------~~--~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~ 92 (532)
..+|||+ .|.|+|||++|++.+. .. .+-.++.|++|+++ +++|++|+|.+++.
T Consensus 164 ~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~~~~----~~GKa~alN~gl~~--- 236 (802)
T 4hg6_A 164 KNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERN----EHAKAGNMSAALER--- 236 (802)
T ss_dssp HTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEECSSC----CSHHHHHHHHHHHH---
T ss_pred HhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEecCC----CCcchHHHHHHHHh---
Confidence 4678886 6999999997765210 00 01146889998873 47999999999998
Q ss_pred CCCCcEEEEecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcc-------cccchhhHHhHHHHHhhhh
Q 009524 93 ISNGQVTLNVDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKN-------ELYSNSLRIYNEVEFEGMD 164 (532)
Q Consensus 93 ~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~n-------d~~~~~~~~~~~~~~~g~d 164 (532)
+++|||+++|||+++ +||++++++.+|. || ++++||+++.+.|.++. ..+.++...++...+.+.+
T Consensus 237 -a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (802)
T 4hg6_A 237 -LKGELVVVFDADHVP-SRDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLD 310 (802)
T ss_dssp -CCCSEEEECCTTEEE-CTTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHH
T ss_pred -cCCCEEEEECCCCCc-ChHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHh
Confidence 799999999999999 7999999999995 66 79999999999886521 1233455677888899999
Q ss_pred ccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChH
Q 009524 165 GYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDV 244 (532)
Q Consensus 165 ~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~ 244 (532)
.+++++++|+++++||+++++ +| ||++++++||.
T Consensus 311 ~~~~~~~~G~~~~~Rr~al~~--------------vG--------------------------------gf~~~~~~ED~ 344 (802)
T 4hg6_A 311 RWGGAFFCGSAAVLRRRALDE--------------AG--------------------------------GFAGETITEDA 344 (802)
T ss_dssp HTTCCCCCSSSEEEEHHHHHH--------------HT--------------------------------TCCCSSSSHHH
T ss_pred hcCCceecccchhhhHHHHHH--------------cC--------------------------------CcCCCCcchHH
Confidence 999999999999999999987 54 88888999999
Q ss_pred HHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccchhh
Q 009524 245 ITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPN 324 (532)
Q Consensus 245 ~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~ 324 (532)
+++.+++++||+++|++. +.+++++|+|+.++++||.||++|.+|+++.+ +|++ .+++++.||++|+....+++.
T Consensus 345 ~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~-~pl~--~~~l~~~~rl~~l~~~~~~~~ 419 (802)
T 4hg6_A 345 ETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRGRWATGMMQMLLLK-NPLF--RRGLGIAQRLCYLNSMSFWFF 419 (802)
T ss_dssp HHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHHHHHHHHHHHHHHS-CTTS--CSSCCHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHHHHHccHHHHHHHh-Cccc--cCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999953 35689999999999999999999999999865 6764 357999999999999999999
Q ss_pred HHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHHHHH
Q 009524 325 CLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDA 404 (532)
Q Consensus 325 ~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~ 404 (532)
+++.++++++|++++++++++++.....++..++.. .....++.....+.....||+.. ..+...++.+...
T Consensus 420 ~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~---~l~~~~~~~~~~~~~r~~~~~~l-----~~~~~~~~~~~a~ 491 (802)
T 4hg6_A 420 PLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGY---LAVSFLVQNALFARQRWPLVSEV-----YEVAQAPYLARAI 491 (802)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHH---HHHHHHHHHHHHTTTSCTTHHHH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHH---HHHHHHHHHHHhcCcHHHHHHHH-----HHHHHHHHHHHHH
Confidence 999999999999999999988876443322211111 11111112222344444566532 2222233333344
Q ss_pred HHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHHHHH
Q 009524 405 ILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQIL 484 (532)
Q Consensus 405 ~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~~~~ 484 (532)
+...+++++.+|+||+|+.+.+. . + .+++..|+.++++++++++++|+++.... . ..+....+..+
T Consensus 492 l~~l~~~~~~~f~VT~Kg~~~~~--~-------~--~~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 557 (802)
T 4hg6_A 492 VTTLLRPRSARFAVTAKDETLSE--N-------Y--ISPIYRPLLFTFLLCLSGVLATLVRWVAF-P--GDRSVLLVVGG 557 (802)
T ss_dssp HHHHHSTTCCCCCCCCCCCCCSS--C-------C--BCTTCHHHHHHHHHHHHHHHHHHHHHHHC-G--GGHHHHHHHHH
T ss_pred HHHHhCCCCCcceECCCCccccc--c-------c--hhhHHHHHHHHHHHHHHHHHHHHHHHhcc-C--CccchhhhhhH
Confidence 44446778899999999875532 1 1 13667888889999999999999998754 1 12333344455
Q ss_pred HHHHHHHHHHHhhhhhhcccCCC
Q 009524 485 LCSALVLINWPLYQGLFLRKDNG 507 (532)
Q Consensus 485 ~~~~~v~~~~P~~~gl~~r~~k~ 507 (532)
++.+.+++..+.+.....|+.+.
T Consensus 558 w~~~~l~~l~~~~~~~~~~~~~R 580 (802)
T 4hg6_A 558 WAVLNVLLVGFALRAVAEKQQRR 580 (802)
T ss_dssp HHHHHHHHHHHHHTTTBCCCCSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 66666666666665555554443
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.41 E-value=5.9e-13 Score=128.44 Aligned_cols=163 Identities=12% Similarity=0.059 Sum_probs=105.3
Q ss_pred CCCCCC-EEEEEeCCCChhHHhh---hccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCC
Q 009524 34 RLDHDT-ILQILIDGRDPNAVDN---EGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSN 109 (532)
Q Consensus 34 ~~dhp~-~v~Vldd~~~~~~~~~---~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~ 109 (532)
.|++|. .|.|+||+++|++.+. ...+.|++.+++.+ ..++++|.|.|++. +++|||+++|+|.++
T Consensus 29 ~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~~------n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~- 97 (240)
T 3bcv_A 29 AQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKK------NAGLGMACNSGLDV----ATGEYVAFCDSDDYV- 97 (240)
T ss_dssp TCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEECC------CCCHHHHHHHHHHH----CCSSEEEECCTTCCC-
T ss_pred hCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEECC------CCChHHHHHHHHHH----cCCCEEEEECCCCcC-
Confidence 455555 5889999998875332 22245888888632 25899999999998 799999999999999
Q ss_pred chHHHHHHHHHhhcccCCCeEEEEeccceeecCCcc------------cccchhhHHhHHHHHhhhhccCC---------
Q 009524 110 NSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKN------------ELYSNSLRIYNEVEFEGMDGYGG--------- 168 (532)
Q Consensus 110 ~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~n------------d~~~~~~~~~~~~~~~g~d~~~~--------- 168 (532)
+|++|.+++..+.+++ ..+|.+.....+.+.. ..+... . ..+. .. ..++.
T Consensus 98 ~~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~--~~~~~~~~~~~~~~ 168 (240)
T 3bcv_A 98 DSDMYMTMYNVAQKYT----CDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKN-E-IHTL-LK--DLIASDPYAREERA 168 (240)
T ss_dssp CTTHHHHHHHHHHHHT----CSEEEC--------------------CEEECSHH-H-HHHH-HG--GGTSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC----CCEEEEeeEEEccCCccccccccccccccccCHH-H-HHHH-HH--HHhhcchhhccccc
Confidence 7999999999987641 2333333222211110 011110 0 0000 00 00110
Q ss_pred ceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC--CCCChHHH
Q 009524 169 PIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG--CPVEDVIT 246 (532)
Q Consensus 169 ~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~--svtED~~t 246 (532)
...+|+++++||+++.+ +| +||+.+ ...||.++
T Consensus 169 ~~~~~~~~~~rr~~~~~--------------~g-------------------------------~~f~~~~~~~~eD~~~ 203 (240)
T 3bcv_A 169 IQVSAKVVLYRRNLIEK--------------KH-------------------------------LRFVSERILPSEDLIF 203 (240)
T ss_dssp HHHTCSCEEEEHHHHHH--------------TT-------------------------------CCCCCTTTCTTHHHHH
T ss_pred cccchhheeeeHHHHHH--------------cC-------------------------------CccCCCCCccCCCHHH
Confidence 11357788999999987 43 256654 45799999
Q ss_pred HHHHHHcCCEEEEec
Q 009524 247 GISIQCQGWKSVYCK 261 (532)
Q Consensus 247 ~~~l~~~Gwrs~y~~ 261 (532)
.+|+..+|+++.|++
T Consensus 204 ~~r~~~~g~~i~~~~ 218 (240)
T 3bcv_A 204 NVDVLANSNIVCVLP 218 (240)
T ss_dssp HHHHHTTCSCEEECC
T ss_pred HHHHHHhCCEEEEEC
Confidence 999999999999984
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.39 E-value=2e-12 Score=143.26 Aligned_cols=177 Identities=16% Similarity=0.109 Sum_probs=116.6
Q ss_pred CCEEEEEeCCCChhHHhhhc--cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHH
Q 009524 38 DTILQILIDGRDPNAVDNEG--CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVR 115 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~--~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~ 115 (532)
+..|.|+||+++|++.+... ...+.+.|+.+++. .++|++|+|.|++. +++|+|+++|+|+++ +|++|.
T Consensus 123 ~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~-~~~~l~ 193 (625)
T 2z86_A 123 DYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAP-NPLWVQ 193 (625)
T ss_dssp CEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEE-CTTHHH
T ss_pred CeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCC-CHHHHH
Confidence 45699999999887644322 12367999987642 25799999999998 799999999999999 799999
Q ss_pred HHHHHhh-cccCCCeEEEEeccceeecCCccc-------ccchhh-HH-----h-------------HHHHHh--hhhcc
Q 009524 116 DALCFFM-DEEKGHEFAFVQFPQNFDNVTKNE-------LYSNSL-RI-----Y-------------NEVEFE--GMDGY 166 (532)
Q Consensus 116 ~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd-------~~~~~~-~~-----~-------------~~~~~~--g~d~~ 166 (532)
+++..|. ++ .+++++..+.+.+..... .+.+.. .. + ...... .....
T Consensus 194 ~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (625)
T 2z86_A 194 SYMELLAVDD----NVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLC 269 (625)
T ss_dssp HHHHHHHHCT----TEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTC
T ss_pred HHHHHHhcCC----ceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhccccccccc
Confidence 9999987 44 678777655444322100 000000 00 0 000000 00011
Q ss_pred C--CceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC---C
Q 009524 167 G--GPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---V 241 (532)
Q Consensus 167 ~--~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv---t 241 (532)
. ...++|+++++||+++.+ +| ||++... .
T Consensus 270 ~~~~~~~~g~~~~~rr~~l~~--------------iG--------------------------------gfde~~~~~g~ 303 (625)
T 2z86_A 270 NTPFRFFSGGNVAFAKKWLFR--------------AG--------------------------------WFDEEFTHWGG 303 (625)
T ss_dssp SCGGGGCCTTEEEEETHHHHH--------------HC--------------------------------CCCTTCSSCCC
T ss_pred CCceeEEeeceeeeEHHHHHH--------------hC--------------------------------CCccccccCCc
Confidence 1 124789999999999987 55 5655443 5
Q ss_pred ChHHHHHHHHHcCCEEEEecCCcccccccCCCCH
Q 009524 242 EDVITGISIQCQGWKSVYCKPERDAFLGVSPTTL 275 (532)
Q Consensus 242 ED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl 275 (532)
||.++++|++.+||++.|++ ...+ +-..|.+-
T Consensus 304 ED~dl~~Rl~~~G~~i~~~p-~~~v-~H~~~~~~ 335 (625)
T 2z86_A 304 EDNEFGYRLYREGCYFRSVE-GAMA-YHQEPPGK 335 (625)
T ss_dssp HHHHHHHHHHHTTCEEEECG-GGCE-EEECCC--
T ss_pred chhhhhhhHHhCCceEEEcc-cchh-hccCCccc
Confidence 99999999999999999984 3333 34444443
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.37 E-value=4.5e-13 Score=130.60 Aligned_cols=202 Identities=9% Similarity=-0.011 Sum_probs=119.5
Q ss_pred CCCCCCC-EEEEEeCCCChhHHhhhcc--CCCcEEEEEeccCC---CCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC
Q 009524 33 SRLDHDT-ILQILIDGRDPNAVDNEGC--ALPTLVYLAREKRP---QYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 33 ~~~dhp~-~v~Vldd~~~~~~~~~~~~--~~p~l~yv~Rekrp---~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~ 106 (532)
..|++|. .|.|+||+++|++.+.... ..+++.|+..+... .....++++|+|.+++. +++|||+++|+|.
T Consensus 24 ~~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd 99 (255)
T 1qg8_A 24 LSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYAALINQAIEM----AEGEYITYATDDN 99 (255)
T ss_dssp HTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTE
T ss_pred HhccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccCHHHHHHHHHHH----cCCCEEEEeCCCC
Confidence 3566665 5999999999876443221 14789999887210 00125799999999998 8999999999999
Q ss_pred CCCchHHHHHHHHHhhcccCCCeEEEEeccceee--cCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhc
Q 009524 107 YSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFD--NVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILC 184 (532)
Q Consensus 107 ~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~--n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 184 (532)
++ +|++|.+++..+.+. +++++|.+..... +.+... ......... ...........|+++++||+++.
T Consensus 100 ~~-~~~~l~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~rr~~~~ 169 (255)
T 1qg8_A 100 IY-MPDRLLKMVRELDTH---PEKAVIYSASKTYHLNENRDI-VKETVRPAA-----QVTWNAPCAIDHCSVMHRYSVLE 169 (255)
T ss_dssp EE-CTTHHHHHHHHHHHC---TTCCEEEEEEEEEEEC---CE-EEEEEECCC-----SCBSCCTTTSCGGGEEEETHHHH
T ss_pred cc-ChHHHHHHHHHHHhC---CCceEEEeceEEEEeCCCCcc-hhhccCchH-----HHHHhhcCCCccceEEEEHHHHH
Confidence 99 799999999988732 2577787766554 322111 110000000 00112234468899999999998
Q ss_pred cCCCChhhHHHhhhccc-hhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCC
Q 009524 185 GRKYDKETKIELKREND-SKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 263 (532)
Q Consensus 185 ~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~ 263 (532)
+ +| ++. ..|..+ ......||.++.+++..+| +.+|++.
T Consensus 170 ~--------------~g~~f~----------------------~~~~~~---~~~~~~eD~~~~~r~~~~g-~~~~~~~- 208 (255)
T 1qg8_A 170 K--------------VKEKFG----------------------SYWDES---PAFYRIGDARFFWRVNHFY-PFYPLDE- 208 (255)
T ss_dssp H--------------HHHHHS----------------------SSSCCC---GGGSTTHHHHHHHHHTTTC-CBEEEEE-
T ss_pred h--------------hccccc----------------------ccccCC---cccchHHHHHHHHHHHHhC-CEEEecC-
Confidence 7 54 220 000000 1113579999999999987 6788743
Q ss_pred cccccccCCCCHHHHH--HHHHHhcccc
Q 009524 264 RDAFLGVSPTTLLQFL--VQRKRWSEGD 289 (532)
Q Consensus 264 ~~a~~g~aP~tl~~~l--~Qr~RWa~G~ 289 (532)
....+-..+.+..... +|+.||.+..
T Consensus 209 ~~~~~r~~~~s~s~~~~~~~~~~~~~~~ 236 (255)
T 1qg8_A 209 ELDLNYITDQSIHFQLFELEKNEFVRNL 236 (255)
T ss_dssp EEEEEEEC--------------CTGGGS
T ss_pred cEEEEEEcCCccchhHHHHHHHHHHHhc
Confidence 3444555666666554 5555565443
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.31 E-value=1.6e-11 Score=131.63 Aligned_cols=205 Identities=13% Similarity=0.021 Sum_probs=129.4
Q ss_pred CCCCCC---EEEEEeCCCChh-HHh---hhccCCC-cEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCC
Q 009524 34 RLDHDT---ILQILIDGRDPN-AVD---NEGCALP-TLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCD 105 (532)
Q Consensus 34 ~~dhp~---~v~Vldd~~~~~-~~~---~~~~~~p-~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD 105 (532)
.+++|. .|.|+||+++|+ +.+ ....+.| .+.++..+++ .++++|+|.+++. +.+|+|+++|+|
T Consensus 54 ~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~D 124 (472)
T 1xhb_A 54 NRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAH 124 (472)
T ss_dssp HSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESS
T ss_pred hcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCC-----CChHHHHHHHHHh----ccCCeEEEECCC
Confidence 345555 699999999873 432 2223567 7999988763 4799999999998 789999999999
Q ss_pred CCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCccc------cc-ch-hhHHhH------H--HHHhhhh---cc
Q 009524 106 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNE------LY-SN-SLRIYN------E--VEFEGMD---GY 166 (532)
Q Consensus 106 ~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd------~~-~~-~~~~~~------~--~~~~g~d---~~ 166 (532)
..+ +|++|.+++..+.+.. .++.+.. ....+.+... .. +. .....+ . ......+ ..
T Consensus 125 ~~~-~p~~L~~ll~~~~~~~---~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
T 1xhb_A 125 CEC-TAGWLEPLLARIKHDR---RTVVCPI-IDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPV 199 (472)
T ss_dssp EEE-CTTCHHHHHHHHHHCT---TEEEEEE-EEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCE
T ss_pred eEe-CccHHHHHHHHHHhCC---CEEEEee-eeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcc
Confidence 999 7999999999887431 3443321 1111111000 00 00 000000 0 0000001 22
Q ss_pred CCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC---CCh
Q 009524 167 GGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VED 243 (532)
Q Consensus 167 ~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv---tED 243 (532)
..+...|.++++||+++.+ +| ||+++.. .||
T Consensus 200 ~~~~~~g~~~~irr~~~~~--------------iG--------------------------------gfde~~~~~g~ED 233 (472)
T 1xhb_A 200 RTPTMAGGLFSIDRDYFQE--------------IG--------------------------------TYDAGMDIWGGEN 233 (472)
T ss_dssp ECSBCCSSSEEEEHHHHHH--------------TT--------------------------------SCCTTSCTTCCCC
T ss_pred cCccccceeEEEEHHHHHH--------------cC--------------------------------CCCCcccccCchh
Confidence 3345678888999999998 65 5554443 699
Q ss_pred HHHHHHHHHcCCEEEEecCCcccc---cccCCCC---------HHHHHHHHHHhcccchhhHHhhcCcc
Q 009524 244 VITGISIQCQGWKSVYCKPERDAF---LGVSPTT---------LLQFLVQRKRWSEGDFQIMLCRYSPA 300 (532)
Q Consensus 244 ~~t~~~l~~~Gwrs~y~~~~~~a~---~g~aP~t---------l~~~l~Qr~RWa~G~lqi~~~~~~p~ 300 (532)
+++++|+...|+++.++. ..... ....|.+ .....++..||..+..+.++.+ .|-
T Consensus 234 ~dl~~R~~~~G~~i~~~p-~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~-~p~ 300 (472)
T 1xhb_A 234 LEISFRIWQCGGTLEIVT-CSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII-SPG 300 (472)
T ss_dssp SHHHHHHHHTTCEEEEEE-EEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHT-STT
T ss_pred HHHHHHHHhcCCeEEEcc-CcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-Ccc
Confidence 999999999999999984 32111 1122221 4567778889999999988764 453
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.26 E-value=1.2e-11 Score=136.91 Aligned_cols=194 Identities=13% Similarity=0.041 Sum_probs=129.1
Q ss_pred CCCCCCCC-EEEEEeCCCChhHHhh---hccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC
Q 009524 32 SSRLDHDT-ILQILIDGRDPNAVDN---EGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY 107 (532)
Q Consensus 32 ~~~~dhp~-~v~Vldd~~~~~~~~~---~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~ 107 (532)
...|++++ .|.|+||+++|++.+. ...+.|++.+++. + ..++++|+|.+++. +++|||+++|+|.+
T Consensus 397 ~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~~-~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~ 466 (625)
T 2z86_A 397 ALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQ-K-----NKGIGSASNTAVRL----CRGFYIGQLDSDDF 466 (625)
T ss_dssp HHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEEE-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCE
T ss_pred HHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEeC-C-----CCCHHHHHHHHHHh----cCCCEEEEECCCcc
Confidence 34567776 4889999998876432 2234688998863 2 25899999999998 79999999999999
Q ss_pred CCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccC
Q 009524 108 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGR 186 (532)
Q Consensus 108 ~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 186 (532)
+ +|+.|.+++..|. +| ++++|.+...+.+.+.+..........+ ..+.+....++|++.++||+++..
T Consensus 467 ~-~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~r~~~~~- 535 (625)
T 2z86_A 467 L-EPDAVELCLDEFRKDL----SLACVYTTNRNIDREGNLISNGYNWPIY-----SREKLTSAMICHHFRMFTARAWNL- 535 (625)
T ss_dssp E-CTTHHHHHHHHHHHCT----TCSEEEEEEEEECTTSCEEEECCCCSSC-----CHHHHTTSCCCCSCEEEEHHHHTT-
T ss_pred c-ChhHHHHHHHHHHhCC----CeeEEEeeeEEECCCCCEeccCcccccC-----CHHHHhhcccCCceEEEEHHHHHH-
Confidence 9 7999999998885 55 5778877665554432211100000000 011123345788999999999987
Q ss_pred CCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC-CCCChHHHHHHHHHcCCEEEEecCCcc
Q 009524 187 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKPERD 265 (532)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~ 265 (532)
+| ||+.. ...||.++.+|+..+| +..|++. ..
T Consensus 536 -------------~g--------------------------------gfd~~~~~~eD~dl~~r~~~~g-~~~~~~~-~~ 568 (625)
T 2z86_A 536 -------------TE--------------------------------GFNESISNAVDYDMYLKLSEVG-PFKHINK-IC 568 (625)
T ss_dssp -------------TT--------------------------------CCCSSCSSCHHHHHHHHHTTTS-CEEEEEE-EE
T ss_pred -------------hC--------------------------------CCCCccCChHHHHHHHHHHHhC-CEEEeCC-cE
Confidence 55 55543 2579999999999999 8888843 22
Q ss_pred ccc--ccCCCCHHHHHHHHHHhcccchhhH
Q 009524 266 AFL--GVSPTTLLQFLVQRKRWSEGDFQIM 293 (532)
Q Consensus 266 a~~--g~aP~tl~~~l~Qr~RWa~G~lqi~ 293 (532)
..+ .....+......|+.+|.+...+.+
T Consensus 569 ~~~r~h~~~~s~~~~~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 569 YNRVLHGENTSIKKLDIQKENHFKVVNESL 598 (625)
T ss_dssp EEEECC----CCSSHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCccchhhHHHHHHHHHHHHHHHH
Confidence 222 3344555666777777765544443
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.25 E-value=1.4e-11 Score=135.67 Aligned_cols=200 Identities=13% Similarity=0.036 Sum_probs=129.7
Q ss_pred CCCCC---EEEEEeCCCChhH-Hh---hhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC
Q 009524 35 LDHDT---ILQILIDGRDPNA-VD---NEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY 107 (532)
Q Consensus 35 ~dhp~---~v~Vldd~~~~~~-~~---~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~ 107 (532)
+++|. .|.|+||+++|++ .+ ....+.|++.++..+++ .++++|+|.+++. +.+|+|+++|+|..
T Consensus 138 qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~fLD~D~~ 208 (570)
T 2d7i_A 138 RSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-----EGLIRTRMLGASV----ATGDVITFLDSHCE 208 (570)
T ss_dssp HSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEECCSSEE
T ss_pred cCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-----CCHHHHHHHHHHh----cCCCEEEEEcCCcc
Confidence 34554 6889999998765 32 22234688999887653 5799999999998 78999999999999
Q ss_pred CCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccch----------hhHHhHHHHHhh--------hhccCCc
Q 009524 108 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSN----------SLRIYNEVEFEG--------MDGYGGP 169 (532)
Q Consensus 108 ~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~----------~~~~~~~~~~~g--------~d~~~~~ 169 (532)
+ +|++|.+++..+.+.. .+ .|.....+.+.+. ..+.. .....+...... ......+
T Consensus 209 ~-~p~~L~~ll~~l~~~~---~~-vv~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (570)
T 2d7i_A 209 A-NVNWLPPLLDRIARNR---KT-IVCPMIDVIDHDD-FRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESP 282 (570)
T ss_dssp E-CTTCSHHHHHHHHHCT---TE-EEEEEEEEECTTT-CCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECS
T ss_pred c-cccHHHHHHHHHHhCC---CE-EEeeeeeccCCCc-hhhccccCCcccccccccccccccccchhhhccCCCcceecc
Confidence 9 7999999999887542 33 2322111222110 00000 000011100000 1112234
Q ss_pred eeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC---CChHHH
Q 009524 170 IYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VEDVIT 246 (532)
Q Consensus 170 ~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv---tED~~t 246 (532)
...|.+.++||+++.+ +| ||+++.. .||+++
T Consensus 283 ~~~g~~~~irr~~~~~--------------iG--------------------------------gfDe~~~~~g~ED~dl 316 (570)
T 2d7i_A 283 VMAGGLFAVDRKWFWE--------------LG--------------------------------GYDPGLEIWGGEQYEI 316 (570)
T ss_dssp SCCSSSEEEEHHHHHH--------------TT--------------------------------SSCTTCCSSSSHHHHH
T ss_pred cccceEEEEEHHHHHh--------------cC--------------------------------CCCCcccccCcchHHH
Confidence 5779999999999998 65 4544433 599999
Q ss_pred HHHHHHcCCEEEEecCCcccc---cccCCCC-------HHHHHHHHHHhcccchhhHHhh
Q 009524 247 GISIQCQGWKSVYCKPERDAF---LGVSPTT-------LLQFLVQRKRWSEGDFQIMLCR 296 (532)
Q Consensus 247 ~~~l~~~Gwrs~y~~~~~~a~---~g~aP~t-------l~~~l~Qr~RWa~G~lqi~~~~ 296 (532)
++|+...|++++|+... ... .+..|.+ .....+...||....-+.+..+
T Consensus 317 ~~Rl~~~G~~i~~~p~~-~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~ 375 (570)
T 2d7i_A 317 SFKVWMCGGRMEDIPCS-RVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR 375 (570)
T ss_dssp HHHHHHTTCEEEEEEEE-EEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT
T ss_pred HHHHHhCCCeEEEccCe-EEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998432 121 1223311 4567777889999998887664
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.24 E-value=2.1e-11 Score=131.83 Aligned_cols=219 Identities=9% Similarity=-0.026 Sum_probs=133.1
Q ss_pred CCCCC---EEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCch
Q 009524 35 LDHDT---ILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNS 111 (532)
Q Consensus 35 ~dhp~---~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p 111 (532)
+.+|. .|.|+||+++|++.+..-.+.|++.++..+++ .++++|+|.+++. +.+|+|+++|+|..+ +|
T Consensus 92 q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~flD~D~~~-~p 161 (501)
T 2ffu_A 92 KSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRR-----EGLMRSRVRGADA----AQAKVLTFLDSHCEC-NE 161 (501)
T ss_dssp HSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSC-----CHHHHHHHHHHHH----CCSSEEEECCSSEEE-CT
T ss_pred hCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCC-----cCHHHHHHHHHHh----cCCCEEEEECCCccc-Cc
Confidence 44554 69999999988764333335689999987663 4799999999998 789999999999999 69
Q ss_pred HHHHHHHHHhhcccCCCeEEEEeccceeecCCccc-------ccch-hhHHhH------HHHH-hhh----hccCCceee
Q 009524 112 QAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNE-------LYSN-SLRIYN------EVEF-EGM----DGYGGPIYC 172 (532)
Q Consensus 112 ~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd-------~~~~-~~~~~~------~~~~-~g~----d~~~~~~~~ 172 (532)
++|.+++..+.+.. .++|.......+.+.-. ..+. .....+ .... ... .....+...
T Consensus 162 ~~L~~ll~~~~~~~----~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (501)
T 2ffu_A 162 HWLEPLLERVAEDR----TRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIA 237 (501)
T ss_dssp TCHHHHHHHHHHCT----TEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCC
T ss_pred cHHHHHHHHHHhCC----CeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCcccc
Confidence 99999999887542 23443221111111000 0000 000000 0000 010 112234567
Q ss_pred cccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC---CChHHHHHH
Q 009524 173 GSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VEDVITGIS 249 (532)
Q Consensus 173 Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv---tED~~t~~~ 249 (532)
|.+.++||+++.+ +| ||+++.. .||+++++|
T Consensus 238 g~~~~irr~~~~~--------------iG--------------------------------gfde~~~~~g~ED~dl~~R 271 (501)
T 2ffu_A 238 GGLFVMDKFYFEE--------------LG--------------------------------KYDMMMDVWGGENLEISFR 271 (501)
T ss_dssp SSSEEEEHHHHHH--------------TT--------------------------------CCCTTCCSSSSHHHHHHHH
T ss_pred ceEEEEEHHHHHH--------------hC--------------------------------CCCccccccCcchHHHHHH
Confidence 8999999999988 65 4544432 799999999
Q ss_pred HHHcCCEEEEecCCccccc---ccC----CCC-----HHHHHHHHHHhcccchhhHHhhcCccccc------cCCcCccc
Q 009524 250 IQCQGWKSVYCKPERDAFL---GVS----PTT-----LLQFLVQRKRWSEGDFQIMLCRYSPARYA------HGKISLGL 311 (532)
Q Consensus 250 l~~~Gwrs~y~~~~~~a~~---g~a----P~t-----l~~~l~Qr~RWa~G~lqi~~~~~~p~~~~------~~~l~~~q 311 (532)
+...|+++.|+. ...... ... |.. .....+...+|..+..+.++.+ .|.... ..++.+++
T Consensus 272 l~~~G~~i~~~p-~~~v~H~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~-~p~~~~~~~g~~~~r~~lr~ 349 (501)
T 2ffu_A 272 VWQCGGSLEIIP-CSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAA-VPSARNVPYGNIQSRLELRK 349 (501)
T ss_dssp HHHTTCEEEEEE-EEEEEECCCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHH-CGGGGGCCCCCCHHHHHHHH
T ss_pred HHhcCCeEEEcc-CcEEEEEccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhc-CcccccCCccchHHHHHHHH
Confidence 999999999984 211111 111 222 2344555566777776666554 465321 11234666
Q ss_pred eeee
Q 009524 312 RLGY 315 (532)
Q Consensus 312 rl~y 315 (532)
+|..
T Consensus 350 ~l~c 353 (501)
T 2ffu_A 350 KLSC 353 (501)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 6653
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.95 E-value=1.3e-09 Score=111.56 Aligned_cols=91 Identities=19% Similarity=0.145 Sum_probs=64.8
Q ss_pred CCCCCC--CEEEEEeCCCChhHHhhhccCCCcEEEEEecc----CCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC
Q 009524 33 SRLDHD--TILQILIDGRDPNAVDNEGCALPTLVYLAREK----RPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 33 ~~~dhp--~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rek----rp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~ 106 (532)
..|++| ..|.|+||+++|++.+.... + ...+..|.+ .+ ...+|++|+|.+++. +++|||+++|+|.
T Consensus 71 ~~q~~~~~~eiivVDdgS~D~t~~~~~~-~-~~~~~~~~~~~~~~~--~n~G~~~a~n~g~~~----a~gd~i~~lD~D~ 142 (329)
T 3ckj_A 71 SPLVDGLVDELIVLDSGSTDDTEIRAVA-A-GARVVSREQALPEVP--IRPGKGEALWRSLAA----SRGDIVVFVDSDL 142 (329)
T ss_dssp GGGBTTTBSEEEEEECSCCSSHHHHHHH-T-TCEEEEHHHHCTTSC--CCCSHHHHHHHHHHH----CCCSEEEECCTTE
T ss_pred HHhhCCCCcEEEEEeCCCCchHHHHHHH-h-hhhhccceeeeccCC--CCCCHHHHHHHHHHh----CCCCEEEEECCCC
Confidence 344454 46999999998876554332 1 123333311 12 236899999999998 7899999999999
Q ss_pred C-CCchHHHHHHHHHhh-cccCCCeEEEEecc
Q 009524 107 Y-SNNSQAVRDALCFFM-DEEKGHEFAFVQFP 136 (532)
Q Consensus 107 ~-~~~p~~l~~~~~~f~-d~~~~~~va~VQ~p 136 (532)
. + +|++|.+++..+. +| ++++|++.
T Consensus 143 ~~~-~p~~l~~l~~~l~~~~----~~~~v~g~ 169 (329)
T 3ckj_A 143 INP-HPMFVPWLVGPLLTGD----GVHLVKSF 169 (329)
T ss_dssp ESC-CTTHHHHHHHHHHSCS----SCCEEEEE
T ss_pred CCc-ChHHHHHHHHHHHhCC----CccEEEEE
Confidence 9 8 7999999998854 55 57777764
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.94 E-value=1.8e-09 Score=120.78 Aligned_cols=190 Identities=10% Similarity=0.007 Sum_probs=114.3
Q ss_pred CEEEEEeCCCChh-----HHhhhccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHH
Q 009524 39 TILQILIDGRDPN-----AVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQA 113 (532)
Q Consensus 39 ~~v~Vldd~~~~~-----~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~ 113 (532)
..|.|+||+++|. +.+......+++.++..++ .+.|+|.|.+++......++|||+.+|+|.++ +|++
T Consensus 213 ~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~N------~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~-~pd~ 285 (657)
T 4fix_A 213 GAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPN------LGGSGGYSRVMYEALKNTDCQQILFMDDDIRL-EPDS 285 (657)
T ss_dssp EEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECCC------CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEE-CTHH
T ss_pred CEEEEEECcCCCccchHHHHHHHHhcCCCEEEEECCC------CCHHHHHHHHHHHHHhcCCCCEEEEECCCCcc-ChhH
Confidence 3699999999752 1222211236799987542 57899999999973211268999999999999 7999
Q ss_pred HHHHHHHhhcccCCCeEEEEeccceeecCCcccc-------------cchhhHH-----h----HH---HHHhhhh-ccC
Q 009524 114 VRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL-------------YSNSLRI-----Y----NE---VEFEGMD-GYG 167 (532)
Q Consensus 114 l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~-------------~~~~~~~-----~----~~---~~~~g~d-~~~ 167 (532)
|.+++.++.+.+ ++++|+......+ +++.. +...... | .. ......+ ...
T Consensus 286 L~~ll~~l~~~~---~~~~vg~~il~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~ 361 (657)
T 4fix_A 286 ILRVLAMHRFAK---APMLVGGQMLNLQ-EPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRID 361 (657)
T ss_dssp HHHHHHHHHHBS---SCCEEEEEEEETT-STTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCC
T ss_pred HHHHHHHHHhCC---CcEEEEeEEecCC-CCceeeecccEecccccccccccccccccccccccccccccccccccccee
Confidence 999999987432 4566653222111 11000 0000000 0 00 0011111 122
Q ss_pred CceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChHHHH
Q 009524 168 GPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITG 247 (532)
Q Consensus 168 ~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~ 247 (532)
.....|+++++||+++++ +|++. ++..-.||++.+
T Consensus 362 v~~~~g~~~lirr~v~~~--------------vGgfd-------------------------------~~F~~~ED~Dl~ 396 (657)
T 4fix_A 362 VDYNGWWTCMIPRQVAEE--------------LGQPL-------------------------------PLFIKWDDADYG 396 (657)
T ss_dssp CSBCCTTEEEEEHHHHHH--------------HCSCC-------------------------------SCSSSSHHHHHH
T ss_pred ccccchhHhHhhHHHHHH--------------hCCCh-------------------------------hHhccCcHHHHH
Confidence 345688999999999998 65322 111235999999
Q ss_pred HHHHHcCCEEEEecCCccccc---ccCCC--CHHHHHHHHHHh
Q 009524 248 ISIQCQGWKSVYCKPERDAFL---GVSPT--TLLQFLVQRKRW 285 (532)
Q Consensus 248 ~~l~~~Gwrs~y~~~~~~a~~---g~aP~--tl~~~l~Qr~RW 285 (532)
+|+..+||+++|++ ...... ...+. .+..+...|.|+
T Consensus 397 lR~~~~G~ki~~~p-~a~V~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 397 LRAAEHGYPTVTLP-GAAIWHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp HHHHHTTCCEEEEE-EEEEEECCSSSSCCTTSTHHHHHHHHHH
T ss_pred HHHHHcCCeEEEEC-CEEEEEcCcCccccccHHHHHHHHHHHH
Confidence 99999999999984 322322 11111 257777777775
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.84 E-value=3.1e-10 Score=128.42 Aligned_cols=169 Identities=13% Similarity=0.044 Sum_probs=0.0
Q ss_pred CCCCCCCCE-EEEEeCCCChhHHhhhc---cCC-CcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCC
Q 009524 32 SSRLDHDTI-LQILIDGRDPNAVDNEG---CAL-PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 32 ~~~~dhp~~-v~Vldd~~~~~~~~~~~---~~~-p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~ 106 (532)
...|++++. |.|+|||++|++.+... .+. +++.++..+++ .++++|.|.|++. ++||+|+++|+|.
T Consensus 24 ll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n-----~G~~~arN~gi~~----A~gdyI~flD~Dd 94 (729)
T 3l7i_A 24 IKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDEN-----SGHAHARNIALEE----VETPYFMFLDADD 94 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCC-----CCHHHHHHHHHHh----ccCCEEEEECCCC
Confidence 445666654 88999999887644322 122 47888877652 5799999999998 7999999999999
Q ss_pred CCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHHHhhhhccCC--ceeecccceeehHhhc
Q 009524 107 YSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGG--PIYCGSGCFHRREILC 184 (532)
Q Consensus 107 ~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~ 184 (532)
++ .|++|.+++..+.++ .+.+... ..+.. +... +........... .+...... ....+.++++||+++.
T Consensus 95 ~~-~p~~l~~l~~~l~~~----d~v~~~~-~~~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rr~~l~ 165 (729)
T 3l7i_A 95 EL-ASYAITFYLEKFNNT----DGLIAPI-HSFTT-QRPQ-FVDLDRVRVEYF-NAKENINSFLRKQSACNIIFRTAIVR 165 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC-ChhHHHHHHHHhcCC----CEEEEee-EEeec-CCCc-cccccceeeeee-cchhhHHHHhhccchhheeeeHHHHH
Confidence 99 799999999988743 3333322 11111 1111 100000000000 00111001 1245677899999998
Q ss_pred cCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCC-CCCChHHHHHHHHHcCCEEEEecCC
Q 009524 185 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKPE 263 (532)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~ 263 (532)
+ +| +||+.+ ...||.++.+++..+|++++|+.+.
T Consensus 166 ~--------------~g-------------------------------l~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~ 200 (729)
T 3l7i_A 166 A--------------HH-------------------------------IRFNENLNTYVDWSFVLEYMKYVNKFVRIFNF 200 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred H--------------cC-------------------------------CCcCCCCCcccCHHHHHHHHHhcCCEEEecCc
Confidence 7 43 256554 3689999999999999999999443
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.62 E-value=1.8e-08 Score=101.73 Aligned_cols=136 Identities=9% Similarity=-0.031 Sum_probs=88.4
Q ss_pred CCcHHHHHHHH----HHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhh
Q 009524 77 NFKAGAMNALI----RVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL 152 (532)
Q Consensus 77 ~~KAGALN~~l----r~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~ 152 (532)
..||.++|.|+ +. +++|||+.+|+|.++ .|+... +... ..|..+.. ....
T Consensus 111 f~~a~a~N~G~~~al~~----A~gd~i~flD~D~i~-~~d~~~----~~~~----------~~p~~~~~------~~~~- 164 (287)
T 2fy7_A 111 FNRAKLLNVGFQEALKD----YDYTCFVFSDVDLIP-MNDHNA----YRCF----------SQPRHISV------AMDK- 164 (287)
T ss_dssp CCHHHHHHHHHHHHHHH----SCCCEEEEECTTEEE-SBTTSC----CSCC----------SSCEECCC------EEGG-
T ss_pred cchhhhhhhHHHHHHHh----CCCCEEEEECCCccc-CCCcce----EecC----------CCCceEEE------eecc-
Confidence 35899999999 65 799999999999999 688421 1100 01111100 0000
Q ss_pred HHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccc
Q 009524 153 RIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKE 232 (532)
Q Consensus 153 ~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~ 232 (532)
+.. + ..-..+.|.+.++||+++.+ +|
T Consensus 165 ---~~~----~--~~~~~~~G~~~~~rr~~f~~--------------vg------------------------------- 190 (287)
T 2fy7_A 165 ---FGF----S--LPYVQYFGGVSALSKQQFLT--------------IN------------------------------- 190 (287)
T ss_dssp ---GTT----S--CSSTTCCCSEEEEEHHHHHH--------------TT-------------------------------
T ss_pred ---ccc----C--CCcCceeeeEEEEEHHHHHH--------------cC-------------------------------
Confidence 000 0 00123578889999999998 66
Q ss_pred cccCCCCC---CChHHHHHHHHHcCCEEEEecCCcccc----------cccCCCCHHHHHHHHHHhcccchhhH
Q 009524 233 IGLKYGCP---VEDVITGISIQCQGWKSVYCKPERDAF----------LGVSPTTLLQFLVQRKRWSEGDFQIM 293 (532)
Q Consensus 233 ~G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~a~----------~g~aP~tl~~~l~Qr~RWa~G~lqi~ 293 (532)
||+..-. .||.++..|++.+|+++.+..+....+ ....|+.+..+.+|++||+++.+..+
T Consensus 191 -GFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 191 -GFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp -SCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred -CCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 4443322 599999999999999887432211011 23578899999999999999998776
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.40 E-value=2.3e-06 Score=89.79 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=62.3
Q ss_pred CCEEEEEeCCCChhHHhhhccCCCcEEEEEec----cCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCC-CCchH
Q 009524 38 DTILQILIDGRDPNAVDNEGCALPTLVYLARE----KRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMY-SNNSQ 112 (532)
Q Consensus 38 p~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Re----krp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~-~~~p~ 112 (532)
+..|.|+||++.|.+.+.... + ...++.+. ..+ ...+|++|+|.+++. +++|+|+++|||.. + +|+
T Consensus 126 ~~EIIVVDDgStD~T~~i~~~-~-~~~v~~~~~~~i~~~--~n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~-~p~ 196 (387)
T 3f1y_A 126 IDQILVVDADSEDGTAGVAAS-H-GAEVYSENELMSGYG--DAHGKGDAMWRALSV----TRGDLVLYIDADTRDF-RPQ 196 (387)
T ss_dssp CSEEEEEECSCSSSHHHHHHH-T-TCEEEEGGGTTGGGC--SCCSHHHHHHHHTTT----CCSSEEEECCTTCSSC-CTH
T ss_pred CeEEEEEcCcCCccHHHHHHH-h-CchhcccceeEecCC--ccCCHHHHHHHHHHh----cCCCEEEEEcCCCCcC-CHH
Confidence 467999999998877554332 1 12344432 112 136899999999998 78999999999999 8 799
Q ss_pred HHHHHHHHhh-cccCCCeEEEEec
Q 009524 113 AVRDALCFFM-DEEKGHEFAFVQF 135 (532)
Q Consensus 113 ~l~~~~~~f~-d~~~~~~va~VQ~ 135 (532)
+|.+++..+. +| ++++|.+
T Consensus 197 ~L~~l~~~l~~~p----~~d~v~G 216 (387)
T 3f1y_A 197 LAYGVLGPVLEVP----GVRFVKA 216 (387)
T ss_dssp HHHTTHHHHHHST----TCCEEEE
T ss_pred HHHHHHHHHHHCC----CceEEEE
Confidence 9999998885 44 4566654
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=98.36 E-value=6.1e-07 Score=87.99 Aligned_cols=49 Identities=6% Similarity=0.017 Sum_probs=42.3
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhc-----ccCCCeEEEEe
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMD-----EEKGHEFAFVQ 134 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d-----~~~~~~va~VQ 134 (532)
.+.|.|+|.|++. +++||++++|+|.++ +|++|.+++..+.+ | +++.|.
T Consensus 60 ~g~a~a~N~Gi~~----A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~----~vg~vg 113 (249)
T 2nxv_A 60 FHGFSWHKQMLPR----CKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADP----KWLVAG 113 (249)
T ss_dssp CCTTTHHHHHGGG----CCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCT----TEEEEE
T ss_pred ccHHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCC----CeeEEe
Confidence 3568999999998 789999999999999 79999999998874 5 577663
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=97.84 E-value=9.1e-05 Score=77.88 Aligned_cols=78 Identities=10% Similarity=-0.050 Sum_probs=53.7
Q ss_pred CEEEEEeCCCChhHHhhhc---cCC-----CcEEEEEeccCCCCCCCCcHHHHHHHH----HHcccCCCCcEEEEecCCC
Q 009524 39 TILQILIDGRDPNAVDNEG---CAL-----PTLVYLAREKRPQYSHNFKAGAMNALI----RVSSKISNGQVTLNVDCDM 106 (532)
Q Consensus 39 ~~v~Vldd~~~~~~~~~~~---~~~-----p~l~yv~Rekrp~~~~~~KAGALN~~l----r~s~~~s~~~~IlvlDaD~ 106 (532)
..|.|+||||.|.+.+... .+. ..++.+. .+|++....||++|++.++ +. ++||+|+++|||.
T Consensus 29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~-~~r~~~~n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADl 103 (397)
T 2bo4_A 29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRL-QERLGTLRPGKGDGMNTALRYFLEE----TQWERIHFYDADI 103 (397)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEE-CCCCSSSSSSHHHHHHHHHHHHHHH----CCCSEEEECCTTC
T ss_pred eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEe-cccCCCCCCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCC
Confidence 3689999999988744322 011 2333332 1222101369999999999 66 7899999999999
Q ss_pred C-CCchHHHHHHHHHhh
Q 009524 107 Y-SNNSQAVRDALCFFM 122 (532)
Q Consensus 107 ~-~~~p~~l~~~~~~f~ 122 (532)
. . +|+.+.+++..+.
T Consensus 104 q~~-~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 104 TSF-GPDWITKAEEAAD 119 (397)
T ss_dssp SSC-CHHHHHHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHH
Confidence 6 5 5999999887664
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=94.98 E-value=0.032 Score=58.20 Aligned_cols=41 Identities=20% Similarity=0.114 Sum_probs=32.0
Q ss_pred CCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHH
Q 009524 76 HNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALC 119 (532)
Q Consensus 76 ~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~ 119 (532)
++||+.||-.++.... ..++|+|+++|||-+. |..+.+.+.
T Consensus 142 r~GKG~Am~aGl~~A~-~~~gd~Vv~~DaDl~i--P~~v~~~~k 182 (394)
T 2zu9_A 142 RSGKGEGMLVGLLLAK-AIGAEYVGFVDADNYI--PGAVNEYVK 182 (394)
T ss_dssp CCSHHHHHHHHHHHHH-HTTCSEEEECCSCBSC--HHHHHHHHH
T ss_pred cCChHHHHHHHHHHHh-hCCCCEEEEEeCCCCC--HHHHHHHHH
Confidence 3599999999999820 0189999999999954 888866654
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=92.59 E-value=0.28 Score=50.28 Aligned_cols=91 Identities=8% Similarity=-0.042 Sum_probs=54.5
Q ss_pred CCCEEEEEeCCCChhHHhhhccCCCcEEEEEecc---CCCCCCCCcH-----------HHHHHHHHHcccCCCCcEEEEe
Q 009524 37 HDTILQILIDGRDPNAVDNEGCALPTLVYLAREK---RPQYSHNFKA-----------GAMNALIRVSSKISNGQVTLNV 102 (532)
Q Consensus 37 hp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rek---rp~~~~~~KA-----------GALN~~lr~s~~~s~~~~Ilvl 102 (532)
++..|.|.|||+.+++.+....--..+.++.-+. ++..+.+.|. .|+|.++.. .++++++++
T Consensus 31 ~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~~ia~h~~~al~~vf~~----~~~~~vIiL 106 (343)
T 1fo8_A 31 ELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYYKIARHYRWALGQIFHN----FNYPAAVVV 106 (343)
T ss_dssp TTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHHHHHHHHHHHHHHHHTT----SCCSEEEEE
T ss_pred CCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccchhHhHHHHHHHHHHHHh----ccCCEEEEE
Confidence 4567999999998876554331001244442111 1111223343 356666554 579999999
Q ss_pred cCCCCCCchHHHHH---HHHHhhcccCCCeEEEEec
Q 009524 103 DCDMYSNNSQAVRD---ALCFFMDEEKGHEFAFVQF 135 (532)
Q Consensus 103 DaD~~~~~p~~l~~---~~~~f~d~~~~~~va~VQ~ 135 (532)
|-|+++ .|+|+.- ++..+.++ +++..|.+
T Consensus 107 EDDl~~-spdF~~y~~~~l~~y~~D---~~I~~ISa 138 (343)
T 1fo8_A 107 EDDLEV-APDFFEYFQATYPLLKAD---PSLWCVSA 138 (343)
T ss_dssp ETTEEE-CTTHHHHHHHHHHHHHHC---TTEEEEES
T ss_pred cCCCeE-CHHHHHHHHHHHHHhhcC---CcEEEEec
Confidence 999999 7999854 44455532 26877753
No 18
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=90.92 E-value=0.77 Score=47.21 Aligned_cols=83 Identities=13% Similarity=0.142 Sum_probs=53.2
Q ss_pred CCCCCCEEEEEeCCCChhH---Hh---hhcc-CCCcEEEEEecc---------C--C------CCCCCCcHHHHHHHHHH
Q 009524 34 RLDHDTILQILIDGRDPNA---VD---NEGC-ALPTLVYLAREK---------R--P------QYSHNFKAGAMNALIRV 89 (532)
Q Consensus 34 ~~dhp~~v~Vldd~~~~~~---~~---~~~~-~~p~l~yv~Rek---------r--p------~~~~~~KAGALN~~lr~ 89 (532)
...|.-.|.|+|||+.|.. .+ .... .-.++..++-++ . | +..+.+|+++|=.++..
T Consensus 75 qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQkn~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~ 154 (391)
T 2wvl_A 75 GIPHEALILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQKDPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVF 154 (391)
T ss_dssp TSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEETTCHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHH
T ss_pred cCCCCceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEeccChHHHHHHHhcCcchhhcccccccccchHHHHHHHHH
Confidence 3456678999999997765 22 1111 124577777421 0 0 12347899999999987
Q ss_pred cccCCCCcEEEEecCCCCCCchHHHHHHHH
Q 009524 90 SSKISNGQVTLNVDCDMYSNNSQAVRDALC 119 (532)
Q Consensus 90 s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~ 119 (532)
. ....++||..+|||.++ ..+ +.+.+.
T Consensus 155 A-k~~~geYVgFvDADdyi-~~~-v~Eyvk 181 (391)
T 2wvl_A 155 A-ALSGRRYVGFIDADNYF-PGA-VWEYVR 181 (391)
T ss_dssp H-HHTTCSEEEECCSCBSC-HHH-HHHHHH
T ss_pred H-HhcCCCEEEEEcCcCCC-ccC-HHHHHH
Confidence 2 11389999999999999 344 444443
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=65.57 E-value=11 Score=37.33 Aligned_cols=157 Identities=15% Similarity=0.109 Sum_probs=90.9
Q ss_pred CCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccce
Q 009524 59 ALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQN 138 (532)
Q Consensus 59 ~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~ 138 (532)
++..-+||.-.. +...-.||..||.+...+ +...|+++.-|.|.+|. .|... |--++. ..|..
T Consensus 81 ~l~y~I~VieQ~--~~~~FNRa~LlNvGf~ea--~~~~d~~ifHDVDLlP~-dd~n~----Y~c~~~--------~~P~H 143 (287)
T 3lw6_A 81 GVAHHIFVLNQV--DRFRFNRASLINVGFQFA--SDVYDYIAMHDVDLLPL-NDNLL----YEYPSS--------LGPLH 143 (287)
T ss_dssp TCEEEEEEEEEC--SSSCCCHHHHHHHHHHHS--CTTCCEEEEECTTEEEC-CTTSC----CCCCCT--------TCCEE
T ss_pred CCceEEEEEecC--CCCccchhheecccHHHH--hccCCEEEEeccccccc-CCCcc----ccCCCC--------CCceE
Confidence 344445554432 123456999999999874 24579999999999994 33111 111110 01211
Q ss_pred eecCCcccccchhhHHhHHHHHhhhhccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhc
Q 009524 139 FDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKAL 218 (532)
Q Consensus 139 f~n~~~nd~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v 218 (532)
+. .++.. | .+.-..+.|....++|+.+.. ++|++.
T Consensus 144 ls-~~~~~---------~--------~~~Y~~~~GGv~a~~re~f~k--------------VNGFsn------------- 178 (287)
T 3lw6_A 144 IA-GPKLH---------P--------KYHYDNFVGGILLVRREHFKQ--------------MNGMSN------------- 178 (287)
T ss_dssp SS-CTTTC---------S--------SCCCTTCCCSEEEEEHHHHHH--------------TTSCCS-------------
T ss_pred Ee-ecccc---------C--------CCCcCCccccEEeccHHHHHH--------------cCCCCC-------------
Confidence 11 11100 0 011223677788888888887 665431
Q ss_pred ccccccccCccccccccCCCCCCChHHHHHHHHHcCCEEEEecCC---c-cccc---------ccCCCCHHHHHHHHHHh
Q 009524 219 ASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE---R-DAFL---------GVSPTTLLQFLVQRKRW 285 (532)
Q Consensus 219 ~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~---~-~a~~---------g~aP~tl~~~l~Qr~RW 285 (532)
..| ||- .||.+...|+...|.++.-.... + ..+. ...|......-.+++||
T Consensus 179 --------~f~----GWG----gEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~ 242 (287)
T 3lw6_A 179 --------QYW----GWG----LEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRD 242 (287)
T ss_dssp --------CCC----SSS----SHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCC
T ss_pred --------cCc----CCC----ccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEc
Confidence 223 332 59999999999999987654210 0 0111 12345566677889999
Q ss_pred cccchhhH
Q 009524 286 SEGDFQIM 293 (532)
Q Consensus 286 a~G~lqi~ 293 (532)
..+.+.-+
T Consensus 243 ~~dGLnsl 250 (287)
T 3lw6_A 243 HKTGLDNV 250 (287)
T ss_dssp SSCSGGGC
T ss_pred cCCCCeee
Confidence 99988776
No 20
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=50.74 E-value=48 Score=29.99 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=31.5
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHh
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFF 121 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f 121 (532)
+-++++-.+++.. .+.+.+++++||+ .+ +++.+++++..+
T Consensus 72 G~~~si~~al~~~---~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF---KDYDAVLVALGDMPFV-TKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT---TTSSEEEEEETTCCCS-CHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh---ccCCcEEEEeCCcccc-CHHHHHHHHHHh
Confidence 5677888888863 2458999999999 56 689999988766
No 21
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=48.60 E-value=38 Score=31.93 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 009524 79 KAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMD 123 (532)
Q Consensus 79 KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d 123 (532)
...++-++++......+.++++++|||+=.-+++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356676777753211126899999999754479999999987765
No 22
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=45.57 E-value=56 Score=28.96 Aligned_cols=41 Identities=7% Similarity=-0.033 Sum_probs=31.2
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHH
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCF 120 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~ 120 (532)
.+-++++-.+++... .+.+.+++++||+ .+ +++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~-~~~~i~~l~~~ 120 (197)
T 2wee_A 79 RGCAASLRVALARVH--PRATGIVLMLGDQPQV-APATLRRIIDV 120 (197)
T ss_dssp -CCHHHHHHHHTTSC--TTEEEEEEEETTCTTC-CHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhc--ccCCeEEEEeCCcCCC-CHHHHHHHHhh
Confidence 356888888887621 2568999999999 56 68889988876
No 23
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=44.73 E-value=50 Score=32.16 Aligned_cols=30 Identities=30% Similarity=0.289 Sum_probs=24.3
Q ss_pred CCCcEEEEecCCCCCCchHHHHHHHHHhhccc
Q 009524 94 SNGQVTLNVDCDMYSNNSQAVRDALCFFMDEE 125 (532)
Q Consensus 94 s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~ 125 (532)
.+.++++..|-|+++ +.+-|.+.+..+ |+.
T Consensus 92 ~~~~Wf~~~DDDtyv-~~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYV-NPKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEE-CHHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEE-cHHHHHHHHHhC-CCC
Confidence 589999999999999 588888877554 553
No 24
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=34.23 E-value=1.3e+02 Score=26.50 Aligned_cols=42 Identities=7% Similarity=-0.070 Sum_probs=31.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHH
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCF 120 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~ 120 (532)
.+-++++..+++... .+.+.+++++||+-.-+++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 79 LGCSSSLKSALTWVD--PTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TTCCCHHHHHHHTSC--TTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhhh--ccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 356788888888621 256899999999964368889888876
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=33.29 E-value=2.4e+02 Score=26.85 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=32.2
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhcc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMDE 124 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d~ 124 (532)
.+.++ +..+++... ..+.+.+++++||+ .. +++.+++++..+.++
T Consensus 90 ~Gt~~-i~~~~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~~ 135 (264)
T 3k8d_A 90 SGTER-LAEVVEKCA-FSDDTVIVNVQGDEPMI-PATIIRQVADNLAQR 135 (264)
T ss_dssp SHHHH-HHHHHHHHT-CCTTCEEEEECTTCTTC-CHHHHHHHHHHHHTS
T ss_pred CCHHH-HHHHHHHhc-cCCCCEEEEEcCCcccC-CHHHHHHHHHHHhhc
Confidence 34555 555555421 13679999999999 45 699999999888764
No 26
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=33.11 E-value=69 Score=29.01 Aligned_cols=40 Identities=5% Similarity=0.120 Sum_probs=31.9
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHh
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFF 121 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f 121 (532)
..++++-.+++.. .+.+.+++++||+ .. +++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~-~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALT-PPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTC-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccC-CHHHHHHHHHHH
Confidence 3578888888762 2578999999999 56 688999998877
No 27
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=32.19 E-value=1e+02 Score=31.37 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=33.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
.+-++++-.+++.. .+.+.+++++||+ .. +++.+++++..+.+
T Consensus 83 ~g~~~~i~~~~~~~---~~~~~~lv~~~D~P~i-~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 83 LGTGHAMQQAAPHF---ADDEDILMLYGDVPLI-SVDTLQRLLAAKPE 126 (459)
T ss_dssp CCHHHHHHHHGGGS---CTTSEEEEEETTCTTC-CHHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHhc---CCCCcEEEEeCCcccC-CHHHHHHHHHHHhh
Confidence 46688888888863 3468999999999 55 58889999888764
No 28
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=30.75 E-value=1.5e+02 Score=26.84 Aligned_cols=43 Identities=12% Similarity=0.010 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
+..+++-.+++... .+.++++++|+|+ .. +++.+++++..+.+
T Consensus 82 ~~~~sv~~al~~~~--~~~~~vl~~d~d~P~~-~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 82 ERQDSVYSGLQEID--VNSELVCIHDSARPLV-NTEDVEKVLKDGSA 125 (228)
T ss_dssp SHHHHHHHHHTTSC--TTCSEEEEEETTCTTC-CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhc--cCCCEEEEecCCCccC-CHHHHHHHHHHHHh
Confidence 56677877887521 2358999999997 66 68899999887754
No 29
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=30.70 E-value=54 Score=30.09 Aligned_cols=42 Identities=7% Similarity=0.079 Sum_probs=32.0
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhcc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMDE 124 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d~ 124 (532)
.+.+++++ +++. .+.+.+++++||+ .. +++.+++++..+.+.
T Consensus 72 ~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~~ 114 (234)
T 2y6p_A 72 SGSDRVLY-VVRD----LDVDLIINYQGDEPFV-YEEDIKLIFRELEKG 114 (234)
T ss_dssp SHHHHHHH-HHTT----CCCSEEEECCTTCCCC-CHHHHHHHHHHHHHT
T ss_pred cchHHHHH-HHHh----CCCCEEEEecCCcCcC-CHHHHHHHHHHHHhC
Confidence 46777774 4554 3578999999999 88 689999998877643
No 30
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=30.58 E-value=1.2e+02 Score=28.73 Aligned_cols=43 Identities=7% Similarity=-0.059 Sum_probs=33.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchH----HHHHHHHHhhcc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQ----AVRDALCFFMDE 124 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~----~l~~~~~~f~d~ 124 (532)
.+-++|+-.++... +.+.++++.||++. +++ .+++++.++.+.
T Consensus 106 ~Gt~~al~~a~~~l----~~~~~lv~~~D~~~-~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 106 KGLGHAILTGEALI----GNEPFAVILADDLC-ISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp CCHHHHHHHTHHHH----CSSCEEEECTTEEE-ECTTSCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHc----CCCCEEEEeCCeec-cCccchHHHHHHHHHHHHc
Confidence 46789998888863 24678889999988 688 899999887653
No 31
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=27.09 E-value=29 Score=31.12 Aligned_cols=40 Identities=18% Similarity=0.144 Sum_probs=29.5
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
+-++++..+++. . .+.+++++||+ .. +++.+++++..+.+
T Consensus 79 g~~~si~~al~~----~-~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 79 GYIEDLNECIGY----F-SEPFLVVSSDLINL-KSKIINSIVDYFYC 119 (196)
T ss_dssp --CCCCCTTTTT----C-SSCEEEEETTEESC-CHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHh----C-CCCEEEEeCCcccC-CHHHHHHHHHHHHh
Confidence 445566666664 2 78999999999 45 68999999988864
No 32
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=26.36 E-value=48 Score=31.02 Aligned_cols=24 Identities=17% Similarity=0.094 Sum_probs=21.5
Q ss_pred CCCcEEEEecCC---CCCCchHHHHHHH
Q 009524 94 SNGQVTLNVDCD---MYSNNSQAVRDAL 118 (532)
Q Consensus 94 s~~~~IlvlDaD---~~~~~p~~l~~~~ 118 (532)
.++++++.+||| .-. +|+.+.+++
T Consensus 52 ~~~dhllfIDAD~~~I~F-dPe~V~rLl 78 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEI-DFQKVEAKF 78 (203)
T ss_dssp TTCCEEEEECTTEEEEEC-CHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcccc-CHHHHHHHH
Confidence 678999999999 888 699888887
No 33
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=24.74 E-value=3.2e+02 Score=25.41 Aligned_cols=45 Identities=11% Similarity=0.079 Sum_probs=30.9
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhcc
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMDE 124 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d~ 124 (532)
.+.+++. .+++... ..+.+.+++++||+ .. +++.+++++..+.+.
T Consensus 74 ~Gt~~~~-~~~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~l~~~~~~~ 119 (252)
T 3oam_A 74 SGTERLA-EVVAKMA-IPADHIVVNVQGDEPLI-PPAIIRQVADNLAAC 119 (252)
T ss_dssp SHHHHHH-HHHHHTT-CCTTSEEEECCTTCTTC-CHHHHHHHHHHHHHS
T ss_pred CcHHHHH-HHHHhcC-cCCCCEEEEEeCCeeec-CHHHHHHHHHHHHhc
Confidence 4566644 3444311 12578999999999 56 689999999888643
No 34
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=23.22 E-value=2.4e+02 Score=26.67 Aligned_cols=43 Identities=7% Similarity=0.023 Sum_probs=30.9
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
+.++ +..+++... ..+.+.+++++||+ .. +++.+++++..+.+
T Consensus 82 Gt~~-i~~a~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~ 125 (256)
T 3tqd_A 82 GTER-IAEAAVALG-FEDDEIIVCLQGDEPLI-PPDAIRKLAEDLDE 125 (256)
T ss_dssp HHHH-HHHHHHHTT-CCTTCEEEEECTTCCCC-CHHHHHHHHHHHHH
T ss_pred cHHH-HHHHHHHhC-cCCCCEEEEEeCCcccC-CHHHHHHHHHHHHh
Confidence 4554 555666521 12578999999999 55 69999999988864
No 35
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=23.16 E-value=79 Score=28.64 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=31.3
Q ss_pred CCcHHHHHHHHHHcccCCCCcEEEEecCCC-CCCchHHHHHHHHH
Q 009524 77 NFKAGAMNALIRVSSKISNGQVTLNVDCDM-YSNNSQAVRDALCF 120 (532)
Q Consensus 77 ~~KAGALN~~lr~s~~~s~~~~IlvlDaD~-~~~~p~~l~~~~~~ 120 (532)
.+-++++-.+++. .+.+.+++++||+ .+ +++.+++++..
T Consensus 77 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQ----EAGEWFLFCPCDTPYI-PPDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHH----CCSSEEEEEETTCTTC-CTTHHHHHHHT
T ss_pred CCHHHHHHHHHHh----CCCCcEEEEeCCcCcC-CHHHHHHHHhh
Confidence 3678888888887 4579999999999 56 58888888765
No 36
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=22.41 E-value=3.3e+02 Score=24.66 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=32.6
Q ss_pred CcHHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 009524 78 FKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMD 123 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d 123 (532)
+..+++-.+++.. .+.+.+++++||+-.-+++.+++++..+.+
T Consensus 84 g~~~~i~~al~~~---~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~ 126 (236)
T 1i52_A 84 ERADSVLAGLKAA---GDAQWVLVHDAARPCLHQDDLARLLALSET 126 (236)
T ss_dssp SHHHHHHHHHHTS---TTCSEEEECCTTCTTCCHHHHHHHHGGGGT
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCccccCCHHHHHHHHHHHHh
Confidence 5777888888762 246899999999853368899998877653
No 37
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=20.74 E-value=99 Score=28.13 Aligned_cols=45 Identities=7% Similarity=0.163 Sum_probs=32.3
Q ss_pred CcHHHHHHHHHHcccC-C--CCcEEEEecCCC-CCCchHHHHHHHHHhhc
Q 009524 78 FKAGAMNALIRVSSKI-S--NGQVTLNVDCDM-YSNNSQAVRDALCFFMD 123 (532)
Q Consensus 78 ~KAGALN~~lr~s~~~-s--~~~~IlvlDaD~-~~~~p~~l~~~~~~f~d 123 (532)
+.+.++-.+++..... . +.+++++++||+ .. +++.+++++..+.+
T Consensus 85 ~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 133 (236)
T 2vsh_A 85 DRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFI-TLRMIQDNIQLAQN 133 (236)
T ss_dssp SHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTC-CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhccCCCCCEEEEecCCcccC-CHHHHHHHHHHHHh
Confidence 4667777777652100 2 458999999999 67 68899999887764
Done!