BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009525
(532 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 269 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQV 328
FA R Y+EL ++ ++ L DV PD D + L M ++ G L + +
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLL-----DVFTPDETLDDFTDFYLVMPFM-GTDLGKLM 120
Query: 329 AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 388
E G + + + LR + G H D PGNL + +L LDFG+ +
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180
Query: 389 EARFAII 395
E ++
Sbjct: 181 EMXGXVV 187
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R A+ G
Sbjct: 159 PSSRRAALCG 168
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 387 PEEARFAIIG 396
P R A+ G
Sbjct: 162 PSSRRAALCG 171
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F ++RVY L Y G R +KL K +E
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKKVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R A+ G
Sbjct: 159 PSSRRAALCG 168
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G+ + +KL K +E
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-----------------------------SKFDE 112
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 288 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 336
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 20 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 75
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 106
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 107 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 157
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 158 PSSRRTTLCG 167
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 162 PSSRRTTLCG 171
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 111
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 162
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 163 PSSRRTTLCG 172
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G+ + +KL K +E
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-----------------------------SKFDE 112
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 164 PSSRRXXLXG 173
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 345 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 401
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 402 ---VNRDYEAMARDYYALDFL 419
VNR + D+++ L
Sbjct: 195 PEVVNRRGHTQSADWWSFGVL 215
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 345 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM- 401
+ +L L G + D P N+L EG + DFG+ E+ E+ ++ G V +M
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 402 ---VNRDYEAMARDYYALDFL 419
VNR + D+++ L
Sbjct: 196 PEVVNRRGHTQSADWWSFGVL 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 159 PSSRRXXLCG 168
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 162 PSSRRXXLCG 171
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 159 PSSRRTTLCG 168
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 309 TSGKV-LTMEWVEG----VKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPH 363
T GK+ L ++++ G +L+++V + +K + +L L G + D
Sbjct: 97 TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELALALDHLHSLGIIYRDLK 153
Query: 364 PGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM----VNRDYEAMARDYYALD 417
P N+L EG + DFG+ E+ E+ ++ G V +M VNR + D+++
Sbjct: 154 PENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFG 213
Query: 418 FL 419
L
Sbjct: 214 VL 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 288 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 336
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSCHA 159
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 160 PSSRRTTLSG 169
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 288 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 336
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
++++ Q +L + G H D P N+L + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI 162
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 162 PSSRRTTLCG 171
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 288 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 336
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 269 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVP---DIFWDY-TSGKV-LTMEWVEGVK 323
FA +V ++ V+ ++ K E+V P D+ + + T GK+ L +E++ G +
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 324 LNEQVAIESQGLKVLDLVN---TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 380
L Q +E +G+ + D I +L L + G + D P N++ +G + DF
Sbjct: 108 LFMQ--LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 381 GMMSETPEEARFAIIGHVVHMVNRDYEAMA 410
G+ E+ + G V H E MA
Sbjct: 166 GLCKESIHD------GTVTHTFCGTIEYMA 189
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 159 PSSRRTXLCG 168
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 288 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 336
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 134
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 135 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 179
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 269 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVP---DIFWDY-TSGKV-LTMEWVEGVK 323
FA +V ++ V+ ++ K E+V P D+ + + T GK+ L +E++ G +
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 324 LNEQVAIESQGLKVLDLVN---TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 380
L Q +E +G+ + D I +L L + G + D P N++ +G + DF
Sbjct: 108 LFMQ--LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 381 GMMSETPEEARFAIIGHVVHMVNRDYEAMA 410
G+ E+ + G V H E MA
Sbjct: 166 GLCKESIHD------GTVTHXFCGTIEYMA 189
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 288 RFKKLYADKEDVLVPDIFWDYTSGKVLT---------MEWVEGVKLNEQVAIES--QGLK 336
RF++ + + P I Y +G+ T ME+V+GV L + V E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
++++ Q +L + G H D P N++ + + +DFG+
Sbjct: 118 AIEVIADACQ-ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI 162
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 23 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 78
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 109
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 110 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 160
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 161 PSSRRXXLCG 170
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 164 PSSRRTTLCG 173
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 301 VPDIFWDYTSGKVL--TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYF 358
V D++ Y G L ME++EG L + V + + V + +L L G
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 359 HADPHPGNLLATPEGKLAFLDFGMMSETPEEA 390
H D ++L T +G++ DFG ++ +E
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 195
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 38 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 93
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 124
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 125 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 175
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 176 PSSRRTTLCG 185
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 102
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 133
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 134 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 185 PSSRRTTLCG 194
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 159 PSSRRTELCG 168
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 160 PSSRRDTLCG 169
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 309 TSGKV-LTMEWVEG----VKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPH 363
T GK+ L ++++ G +L+++V + +K + L L G + D
Sbjct: 101 TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELALGLDHLHSLGIIYRDLK 157
Query: 364 PGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHM----VNRDYEAMARDYYA 415
P N+L EG + DFG+ E E+ ++ G V +M VNR + + D+++
Sbjct: 158 PENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWS 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 159 PSSRRTDLCG 168
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 77
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 108
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 109 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 160 PSSRRTDLCG 169
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 21 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 76
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 107
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 108 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 159 PSSRRTDLCG 168
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 26 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 81
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 112
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 113 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 164 PSSRRTDLCG 173
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 314 LTMEWVEGVKLNEQVAIESQG-LKVLDLVNTGIQC--SLRQLLEYGYFHADPHPGNLLAT 370
L ME++EG L+E IES G L V +N Q ++ + H D P N+L
Sbjct: 88 LVMEYIEGPTLSE--YIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 371 PEGKLAFLDFGM---MSETPEEARFAIIGHV 398
L DFG+ +SET ++G V
Sbjct: 146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 24 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 79
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 110
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 111 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 162 PSSRRDDLCG 171
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 67/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K I+A+KV E G++ L R V + + +++ L
Sbjct: 18 FGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 73
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 104
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 105 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 155
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 156 PSSRRTTLCG 165
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 269 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDI----FWDYTSGKVLTMEWVEGVKL 324
FA R Y+EL ++ Q+ L DV P F+D+ L M +++ L
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLL-----DVFTPASSLRNFYDF----YLVMPFMQ-TDL 133
Query: 325 NEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 384
+ + +E K+ LV ++ L+ + G H D PGNL + +L LDFG+
Sbjct: 134 QKIMGMEFSEEKIQYLVYQMLK-GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL-- 190
Query: 385 ETPEEARFAIIGHVVHMVNRDYEA 408
AR A ++V R Y A
Sbjct: 191 -----ARHADAEMTGYVVTRWYRA 209
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 345 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 390
I L L E G H D HPGN+L + DF + E +A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 345 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 390
I L L E G H D HPGN+L + DF + E +A
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 136 FTRLG--PTFVKLGQGLSTRPDICPPEYL-EELSE 167
FT+L P+ V LGQG PDI PP Y+ EELS+
Sbjct: 16 FTKLAADPSVVNLGQGF---PDISPPSYVKEELSK 47
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Query: 136 FTRLG--PTFVKLGQGLSTRPDICPPEYL-EELSE 167
FT+L P+ V LGQG PDI PP Y+ EELS+
Sbjct: 16 FTKLAADPSVVNLGQGF---PDISPPSYVKEELSK 47
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 210 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 269 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 327
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 328 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
+ Q L+ LD ++ C + H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHA--NCIV---------HRDLKPENILVTSGGTVKLADFGL 158
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 170
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 36/175 (20%)
Query: 210 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 269 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 327
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 328 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
+ Q L+ LD ++ H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHANC-----------IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 210 GQVYKAQLKYSGQIVAVK-VQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VYKA+ +SG VA+K V+ P EE GL +R V L+ + +VV L+D
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEE--GLPISTVREVA-LLRRLEAFEHPNVVRLMDV 74
Query: 269 FA-SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQ 327
A SR +E+ ++ + + Y DK G+
Sbjct: 75 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP--------------------PPGLPAETI 114
Query: 328 VAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
+ Q L+ LD ++ C + H D P N+L T G + DFG+
Sbjct: 115 KDLMRQFLRGLDFLHA--NCIV---------HRDLKPENILVTSGGTVKLADFGL 158
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 171
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ + S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL + +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SRFDE 111
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 163 PSSRRTTLCG 172
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ K S I+A+KV E G++ L R V + + +++ L
Sbjct: 47 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 102
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL K +E
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SKFDE 133
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 134 QRT----ATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 185 PSSRRDDLCG 194
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 347 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
C ++ L G H D P N++ + L LDFG+
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 177
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 313 VLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLAT 370
VL ME+V+G +L +++ ES L LD L I +R + + H D P N+L
Sbjct: 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV 221
Query: 371 PEG--KLAFLDFGM 382
++ +DFG+
Sbjct: 222 NRDAKQIKIIDFGL 235
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 300 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 359
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 87 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 360 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 389
D ++L T +G++ DFG ++ +E
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 45/126 (35%), Gaps = 18/126 (14%)
Query: 354 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY 413
++G H D P N+L G++ DFG I G +V +D A Y
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFG------------ISGRLVDDKAKDRSAGCAAY 190
Query: 414 YA------LDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNV 467
A D PD D+ V +L + N KT + L VL + P +
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250
Query: 468 PAYYAL 473
P +
Sbjct: 251 PGHMGF 256
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 300 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 359
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 91 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 360 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 389
D ++L T +G++ DFG ++ +E
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 173
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 300 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 359
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 98 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 360 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 389
D ++L T +G++ DFG ++ +E
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 180
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 271 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 326
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 122 IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA 181
Query: 387 PEE 389
EE
Sbjct: 182 DEE 184
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 300 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 359
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 96 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 360 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 389
D ++L T +G++ DFG ++ +E
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 178
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 336 KVLDLVNTGIQCS-----LRQLL-------EYGYFHADPHPGNLLATPEGKLAFLDFGM 382
KVLD TG+Q S L QLL ++ H D P NLL +G L DFG+
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 336 KVLDLVNTGIQCS-----LRQLL-------EYGYFHADPHPGNLLATPEGKLAFLDFGM 382
KVLD TG+Q S L QLL ++ H D P NLL +G L DFG+
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 271 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 326
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 54 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 113
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 114 IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 173
Query: 387 PEE 389
EE
Sbjct: 174 DEE 176
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 345 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 399
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG------------ISGYLV 161
Query: 400 HMVNRDYEAMARDYYALDFLSPDVD 424
V +D +A + Y A + ++P+++
Sbjct: 162 DDVAKDIDAGCKPYMAPERINPELN 186
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 53/235 (22%)
Query: 210 GQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 269
G V A+ K+SG+ VAVK+ +D + L N+ V +
Sbjct: 59 GIVCLAREKHSGRQVAVKM----------MDLRKQQRRELLFNEVVIM------------ 96
Query: 270 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE-QV 328
R YQ N V+ K Y E++ V ++ G LT + V V+LNE Q+
Sbjct: 97 --RDYQHFNVVE-------MYKSYLVGEELWV---LMEFLQGGALT-DIVSQVRLNEEQI 143
Query: 329 AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 388
A V + +L L G H D ++L T +G++ DFG ++ +
Sbjct: 144 AT----------VCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193
Query: 389 EA--RFAIIGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIVPALRNFFDDA 439
+ R ++G M E ++R YA +D S + V +V +F D+
Sbjct: 194 DVPKRKXLVGTPYWMAP---EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 44/190 (23%)
Query: 209 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 268
G VY A+ + S I+A+KV E G++ L R V + + +++ L
Sbjct: 25 FGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH----LRHPNILRLYGY 80
Query: 269 F--ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE 326
F A+RVY L Y G R +KL + +E
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKL-----------------------------SRFDE 111
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
Q + +L N C ++++ H D P NLL G+L DFG
Sbjct: 112 Q----RTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 387 PEEARFAIIG 396
P R + G
Sbjct: 163 PSSRRDTLCG 172
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 363
Y+ G++ + ME ++G L+ QV E++ + ++L V+ + L L E + H D
Sbjct: 84 YSDGEISICMEHMDGGSLD-QVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVK 142
Query: 364 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 143 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 180
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 300 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 359
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 141 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 193
Query: 360 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 389
D ++L T +G++ DFG ++ +E
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223
>pdb|3ILK|A Chain A, The Structure Of A Probable Methylase Family Protein From
Haemophilus Influenzae Rd Kw20
pdb|3ILK|B Chain B, The Structure Of A Probable Methylase Family Protein From
Haemophilus Influenzae Rd Kw20
Length = 244
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 259 TTDVVALIDEFASRVYQELNYVQEGQNARRFKKLY 293
TTD +A ++ R+YQ L ++Q R+ K+LY
Sbjct: 179 TTDQLAYFFDYTERIYQSLGFIQNQGVXRKLKRLY 213
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 337 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
+L L+N C R++L H D P NLL EG+L DFG+
Sbjct: 106 LLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 348 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 392
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 348 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 392
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 269 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDI----FWDYTSGKVLTMEWVEGVKL 324
FA R Y+EL ++ Q+ L DV P F+D+ L M +++ L
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLL-----DVFTPASSLRNFYDF----YLVMPFMQ-TDL 115
Query: 325 NEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 384
+ + ++ K+ LV ++ L+ + G H D PGNL + +L LDFG+
Sbjct: 116 QKIMGLKFSEEKIQYLVYQMLK-GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL-- 172
Query: 385 ETPEEARFAIIGHVVHMVNRDYEA 408
AR A ++V R Y A
Sbjct: 173 -----ARHADAEMTGYVVTRWYRA 191
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 271 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS----GKVLTMEWVEGVKLNE 326
SR +Q L + + R K + + + D+F TS +V + + G LN
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 327 QVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
V ++ + + + + L+ + G H D P N+ + +L LDFG+ +
Sbjct: 122 IVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA 181
Query: 387 PEE 389
EE
Sbjct: 182 DEE 184
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 345 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 399
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG------------ISGYLV 188
Query: 400 HMVNRDYEAMARDYYALDFLSPDVD 424
V +D +A + Y A + ++P+++
Sbjct: 189 DDVAKDIDAGCKPYXAPERINPELN 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 340 LVNTGIQCSLRQLLEYGYF-------HADPHPGNLLATPEGKLAFLDFGMMSET 386
L IQ RQ+LE F H D GN+L T EG + DFG+ ++
Sbjct: 114 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 348 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 392
SL L + G++H D P N++ +DFG + TP++ +
Sbjct: 351 SLAALEKKGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 340 LVNTGIQCSLRQLLEYGYF-------HADPHPGNLLATPEGKLAFLDFGMMSET 386
L IQ RQ+LE F H D GN+L T EG + DFG+ ++
Sbjct: 106 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 159
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 300 LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 359
LV D W + ME++EG L + V + + V + +L L G H
Sbjct: 218 LVGDELW-------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 360 ADPHPGNLLATPEGKLAFLDFGMMSETPEE 389
D ++L T +G++ DFG ++ +E
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300
>pdb|2I2P|O Chain O, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2I2U|O Chain O, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|3FIH|O Chain O, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
pdb|3IY8|O Chain O, Leishmania Tarentolae Mitonchondrial Ribosome Small
Subunit
pdb|2WWL|O Chain O, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
pdb|3J00|O Chain O, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
pdb|4A2I|O Chain O, Cryo-Electron Microscopy Structure Of The 30s Subunit In
Complex With The Yjeq Biogenesis Factor
pdb|3J0U|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class2 Of The Six
Classes)
pdb|3J0V|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 4a Of The Six
Classes)
pdb|3J0X|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 4b Of The Six
Classes)
pdb|3J0Z|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 5 Of The Six
Classes)
pdb|3J10|R Chain R, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 6 Of The Six
Classes)
pdb|3J13|Q Chain Q, Structural Characterization Of Mrna-Trna Translocation
Intermediates (30s Ribosome Of Class 3 Of The Six
Classes)
Length = 88
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 84 ARNYGSRPVQLLRRTLQILVALGSFS-----------LKLLIDQRNGVLDQNKRKRAAEL 132
A + GS VQ+ T QI G F+ L ++ QR +LD KRK A
Sbjct: 18 ANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARY 77
Query: 133 RRIFTRLG 140
R+ RLG
Sbjct: 78 TRLIERLG 85
>pdb|2AVY|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2AW7|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
pdb|1VS5|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|1VS7|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
pdb|2VHO|O Chain O, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
pdb|2VHP|O Chain O, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
pdb|3DF1|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
pdb|3DF3|O Chain O, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
pdb|3E1A|H Chain H, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre- Accommodation State
pdb|3E1C|H Chain H, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
pdb|3KC4|O Chain O, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
In Pdb Entry 3kcr
pdb|3IZV|S Chain S, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
pdb|3IZW|S Chain S, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
pdb|4ADV|O Chain O, Structure Of The E. Coli Methyltransferase Ksga Bound To
The E. Coli 30s Ribosomal Subunit
Length = 89
Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 84 ARNYGSRPVQLLRRTLQILVALGSFS-----------LKLLIDQRNGVLDQNKRKRAAEL 132
A + GS VQ+ T QI G F+ L ++ QR +LD KRK A
Sbjct: 19 ANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARY 78
Query: 133 RRIFTRLG 140
R+ RLG
Sbjct: 79 TRLIERLG 86
>pdb|3JVN|A Chain A, Crystal Structure Of The Acetyltransferase Vf_1542 From
Vibrio Fischeri, Northeast Structural Genomics
Consortium Target Vfr136
Length = 166
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 247 VGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF- 305
+GF+ + ++I+T + +Y E Y +EG + ++ + +D V +IF
Sbjct: 68 IGFITGHFCELISTVSKLVXXATIDELYIEKEYRREGVAEQLXXRIEQELKDYGVKEIFV 127
Query: 306 --WDYTSGKVLTMEWVEGVKLNEQV 328
WD+ G +E+ LNE +
Sbjct: 128 EVWDFNKG---ALEFYNKQGLNEHI 149
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 363
Y+ G++ + ME ++G L+ QV ++ + ++L V+ + L L E + H D
Sbjct: 77 YSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 135
Query: 364 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + +E +G +M
Sbjct: 136 PSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYM 173
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 345 IQCSLRQLLEY-----GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 399
I S+ + LE+ H D P N+L G++ DFG I G++V
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG------------ISGYLV 205
Query: 400 HMVNRDYEAMARDYYALDFLSPDVD 424
V + +A + Y A + ++P+++
Sbjct: 206 DSVAKTIDAGCKPYMAPERINPELN 230
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 297 EDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLL 353
E+++ + ++ T+ L M+ V G +L +++ +G+ K LV + +++ L
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL--ERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 354 EYGYFHADPHPGNLL-ATPE--GKLAFLDFGM 382
E G H D P NLL TPE K+ DFG+
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 345 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVV- 399
I C L L + D P N+L G + D G+ PE + R +G++
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 400 HMVNRDYEAMARDYYALDFL 419
+V + + D++AL L
Sbjct: 355 EVVKNERYTFSPDWWALGCL 374
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 345 IQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVV- 399
I C L L + D P N+L G + D G+ PE + R +G++
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 400 HMVNRDYEAMARDYYALDFL 419
+V + + D++AL L
Sbjct: 355 EVVKNERYTFSPDWWALGCL 374
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 344 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 386
GI L + GY H D P N+L EG+ +D G M++
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 362
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 93 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 363 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 189
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 363
Y+ G++ + ME ++G L+ QV ++ + ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 364 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 363
Y+ G++ + ME ++G L+ QV ++ + ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 364 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 339 DLVNTGIQCSLRQLLEYGYF----HADPHPGNLLATPEGKLAFLDFGMMSE 385
D + T +Q +L+ L EY +F H D GN+L EG DFG+ +
Sbjct: 125 DEIATILQSTLKGL-EYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 362
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 363 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 348 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 390
+L + G+ H D P N+L G L DFG + +E
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 362
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 363 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 363
Y+ G++ + ME ++G L+ QV ++ + ++L V+ + L L E + H D
Sbjct: 101 YSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 159
Query: 364 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 160 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 197
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 348 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 390
+L + G+ H D P N+L G L DFG + +E
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL---KVLDLVNTGIQCSLRQLLE-YGYFHADP 362
Y+ G++ + ME ++G L++ ++ G ++L V+ + L L E + H D
Sbjct: 136 YSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 363 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 348 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 385
+L L G H D P N+ P G+ DFG++ E
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 308 YTSGKV-LTMEWVEGVKLNEQVAIESQGL--KVLDLVNTGIQCSLRQLLE-YGYFHADPH 363
Y+ G++ + ME ++G L+ QV ++ + ++L V+ + L L E + H D
Sbjct: 74 YSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 132
Query: 364 PGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHM 401
P N+L G++ DFG+ + + + +G +M
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170
>pdb|1QSO|A Chain A, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
pdb|1QSO|B Chain B, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
pdb|1QSO|C Chain C, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
pdb|1QSO|D Chain D, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae
Length = 149
Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 287 RRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVN 342
+R K Y D +V PD D+ G+ L +K+ VA+ES K++ ++N
Sbjct: 16 QRLWKSYQDFYEVSFPDDLDDFNFGRFLD----PNIKMWAAVAVESSSEKIIGMIN 67
>pdb|1QSM|A Chain A, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae In Complex With Acetyl Coenzyme A
pdb|1QSM|B Chain B, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae In Complex With Acetyl Coenzyme A
pdb|1QSM|C Chain C, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae In Complex With Acetyl Coenzyme A
pdb|1QSM|D Chain D, Histone Acetyltransferase Hpa2 From Saccharomyces
Cerevisiae In Complex With Acetyl Coenzyme A
Length = 152
Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 287 RRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVN 342
+R K Y D +V PD D+ G+ L +K+ VA+ES K++ ++N
Sbjct: 19 QRLWKSYQDFYEVSFPDDLDDFNFGRFLD----PNIKMWAAVAVESSSEKIIGMIN 70
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 348 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 390
+L + G+ H D P N+L G L DFG + +E
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 358 FHADPHPGNLLATPEGKLAFLDFGMMSETPEE 389
H D P NL + +L LDFG+ T +E
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCRHTDDE 178
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 356 GYFHADPHPGNLLATPEGKLAFLDFGMMSE 385
GY H D P NLL KL +DFG+ ++
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157
>pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|D Chain D, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|F Chain F, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|H Chain H, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
Length = 941
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 277 LNYVQEGQNARRFKKLYADKE-----------DVLVPDIFWDYTSGKVLTMEWVEGVKLN 325
L +VQ G A F ++YA + D P ++ + V+ V+L
Sbjct: 464 LGHVQRGGTAVAFDRIYATLQGVEAVNAVLECDADTPSPMIAIKEDQITRVPLVDAVELT 523
Query: 326 EQVA--IESQGL-KVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 382
+QVA IES+ K + L ++ ++ + AD P +L K+A ++ G
Sbjct: 524 QQVAKSIESRNFKKAISLRDSEFVEHMKNFISTN--SADHVPPSLPLEKRKKIAIINVGA 581
Query: 383 MSETPEEARFAII------GHVVHMVNRDYEAMAR 411
+ A +++ GHV + ++ + +AR
Sbjct: 582 PAGGMNSAVYSMATYCMSRGHVPYAIHNGFSGLAR 616
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,649,240
Number of Sequences: 62578
Number of extensions: 590108
Number of successful extensions: 1788
Number of sequences better than 100.0: 191
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 1700
Number of HSP's gapped (non-prelim): 208
length of query: 532
length of database: 14,973,337
effective HSP length: 103
effective length of query: 429
effective length of database: 8,527,803
effective search space: 3658427487
effective search space used: 3658427487
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)