Query 009527
Match_columns 532
No_of_seqs 376 out of 1464
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 07:12:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009527.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009527hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hyg_A Putative uncharacterize 99.9 1.4E-26 4.8E-31 229.7 11.9 175 323-513 106-297 (301)
2 3icu_A E3 ubiquitin-protein li 99.8 8.1E-21 2.8E-25 182.0 15.4 136 45-189 35-194 (194)
3 3iib_A Peptidase M28; YP_92679 98.9 2.4E-09 8.2E-14 114.5 11.5 104 78-181 104-224 (444)
4 2ek8_A Aminopeptidase; metallo 98.8 3.7E-08 1.3E-12 104.4 14.3 96 80-180 93-193 (421)
5 3fed_A Glutamate carboxypeptid 98.4 7.9E-07 2.7E-11 100.2 9.8 91 80-172 127-268 (707)
6 3kas_A Transferrin receptor pr 98.3 1E-06 3.5E-11 98.3 9.5 90 80-171 108-230 (640)
7 3i6s_A Subtilisin-like proteas 98.2 2.3E-06 7.7E-11 95.8 8.8 93 80-181 257-355 (649)
8 1y9z_A Alkaline serine proteas 98.1 5E-06 1.7E-10 88.5 8.6 112 91-211 258-385 (441)
9 1xf1_A C5A peptidase, SCP; hyd 97.9 3E-05 1E-09 90.0 11.8 90 81-181 261-352 (926)
10 2kr6_A Presenilin-1; protease, 96.8 0.0019 6.4E-08 60.0 6.5 67 429-506 88-157 (176)
11 3vta_A Cucumisin; subtilisin-l 90.2 0.37 1.3E-05 53.3 6.7 72 91-175 268-343 (621)
No 1
>4hyg_A Putative uncharacterized protein; protease, membrane protein; 3.32A {Methanoculleus marisnigri JR1} PDB: 4hyc_A 4hyd_A
Probab=99.93 E-value=1.4e-26 Score=229.66 Aligned_cols=175 Identities=21% Similarity=0.272 Sum_probs=123.2
Q ss_pred HHHHHHHHHHhhhhhhccCccchhHhhHHHHHHHHHHHHhccc--CchHHHHHHHHHHHHHHHHhhhccccccccceeee
Q 009527 323 VVLLFCVVFAVVWAVRRQASYSWVGQDILGICLMITVLQMARL--PNIKVASVLLCCAFVYDIFWVFVSPLIFHESVMIA 400 (532)
Q Consensus 323 ~~~~~~~~~~~~w~~~~~~~~~W~~~nilg~~~~~~~i~~i~l--~~~k~~~ilL~~lf~YDif~Vf~s~~~fg~svMv~ 400 (532)
...+.+++++..++.|.+ |+..|+.|++++..+...+.+ ..+ .+.+||+++++||++|||.|+ ||++
T Consensus 106 ~a~~~a~~~~~ll~~ype----Wyvid~~Gi~~~aG~aalFGISl~~~-paiiLL~~LavYDaISVy~Tk------HMvt 174 (301)
T 4hyg_A 106 GTLIGAVAVTALLYLYPE----WYVIDILGVLISAGVASIFGISLEPL-PVLVLLVLLAVYDAISVYRTK------HMIT 174 (301)
T ss_dssp HHHHHHHHHHHHHHTCCC----SSHHHHHHHHHHHHHHHHHHHSSCHH-HHHHHHHHHHHHHHHHHHHHH------HHHH
T ss_pred HHHHHHHHHHHHHHhccc----HHHhhHHHHHHHhhHHHHHhhccchH-HHHHHHHHHHHHHhhhccCch------HHHH
Confidence 334446666665555553 999999999999998887665 566 899999999999999999776 9999
Q ss_pred ecccCCCCCCCCCEEEEeccccC-------------CCCcccccCCCccchhhHHHHHHhhhccccccC--cccchHHHH
Q 009527 401 VARGDNSGGESIPMLLRIPRLFD-------------PWGGYDMIGFGDILFPGLLICFAFRYDKENKKG--VVKGYFLWL 465 (532)
Q Consensus 401 VA~~~~~~~~~~P~~l~~P~~~~-------------~~~~~s~LGlGDIviPGl~i~~~~rfD~~~~~~--~~~~YF~~~ 465 (532)
+|+|.- +.++|+++++|+-.+ .+++..++|+||+++|+++++.+.+||...... ..-+ ++.+
T Consensus 175 LAegvm--dlk~PilfViP~~~~ys~~~~~~~~~~~~er~a~~iGlGD~viP~ilVvSa~~F~~~~~~~g~~~lP-algA 251 (301)
T 4hyg_A 175 LAEGVL--ETKAPIMVVVPKRADYSFRKEGLNISEGEERGAFVMGMGDLIMPSILVVSSHVFVDAPAVLWTLSAP-TLGA 251 (301)
T ss_dssp HTTTC----------------------------------CHHHHHHHHHHHHHHHHHHHHCC---------CCCS-CHHH
T ss_pred HHHhhh--ccCCceEEEEecCCCccccccccccccccccceeEecCcchhHHHHHHHHHHHHcccccccccccch-HHHH
Confidence 999964 468999999998422 136688999999999999999999999754411 1123 7899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccccccchhhhHHHHHHHHHhchhh
Q 009527 466 IIGYGFGLFLTYLGLYLMNGHGQPALLYLVPCTLGLTVILGLARGELK 513 (532)
Q Consensus 466 ~~gY~~GL~~t~~~~~~~~~~~QPALlYlvP~~l~~~~~~a~~rgel~ 513 (532)
++||.+||.++... ++++++||.|.||++.++++.++-+..+||+.
T Consensus 252 ~~Gt~~Gl~vLl~~--V~~grpqaGLP~LN~GaI~Gfllg~l~~G~~~ 297 (301)
T 4hyg_A 252 MVGSLVGLAVLLYF--VNKGNPQAGLPPLNGGAILGFLVGAALAGSFS 297 (301)
T ss_dssp HHHHHHHHHHHHHH--HTSSSCCCSHHHHHHHHHHHHHHTTSCC----
T ss_pred HHHHHHHHHHHHHH--HHcCCCCCCCCccchHHHHHHHHHHHHhceec
Confidence 99999999999652 23599999999999999999999999999986
No 2
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.85 E-value=8.1e-21 Score=182.02 Aligned_cols=136 Identities=22% Similarity=0.310 Sum_probs=106.6
Q ss_pred EEEEEeecCC--C--CccceeecccCCcCCCCCccccCceeEeEEeC---CCCCCCCCCC----C-------CCCcEEEE
Q 009527 45 QLVKVKNWVD--N--VEGESFAGLTARFGLPLPSDAAKAFKLPAVLS---NPLNCCSTAS----K-------LSGSIALS 106 (532)
Q Consensus 45 ~lVkv~~~~~--g--~e~~~~~~~~A~FG~~lp~~~~~a~~~~Lv~~---~p~daC~~~~----~-------l~g~IaLV 106 (532)
.+|.+ +|.| + +...++.+.+|+||..+|... .++.++.+ +|.+||++.+ . .+|+||||
T Consensus 35 A~vn~-sy~d~~~~~n~t~~~~~e~a~FG~~~p~~~---v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV 110 (194)
T 3icu_A 35 AYLNV-SWRVPHTGVNRTVWELSEEGVYGQDSPLEP---VAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALI 110 (194)
T ss_dssp EEEEE-EEECCSSCTTCEEEEEEEEEEECTTSCCSC---EEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEE
T ss_pred EEEEE-EEECCCCCccceeeecccccccCCCCCCCC---cEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEE
Confidence 44444 4543 3 344467889999999998866 67788765 4789999876 1 25799999
Q ss_pred ecCC-CCHHHHHHHHHHcCCcEEEEEeCCC---cchhcccCCCCCCCcccceEEEechHhHHHHHHHhcccceEEEEeec
Q 009527 107 MRGD-CAFTTKAEVAQAAGAAALVVINDEE---DLYKMVCSENDTALNISIPVLMIPKSRGDALNKSIADKQRVELLLYA 182 (532)
Q Consensus 107 ~RG~-CsF~~Ka~nAq~aGA~avIV~n~~~---~l~~m~~~~~~~~~~i~IPvv~Is~~~G~~L~~~l~~G~~V~V~l~~ 182 (532)
+||+ |+|.+|++|||++||+|+|||||.+ ....|... ...+||++||++++|+.|++.+++|.+|++++..
T Consensus 111 ~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~-----~~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvti~v 185 (194)
T 3icu_A 111 QRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHP-----GAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEV 185 (194)
T ss_dssp ESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCT-----TCCSSEEEEECHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCC-----CCCceeEEEECHHHHHHHHHHHHCCCeEEEEEEC
Confidence 9999 9999999999999999999999852 35667543 1357999999999999999999999999998864
Q ss_pred CC--CCCcc
Q 009527 183 PN--RPDVD 189 (532)
Q Consensus 183 p~--~p~vD 189 (532)
.. .||+|
T Consensus 186 g~~h~pw~~ 194 (194)
T 3icu_A 186 GKKHGPWVN 194 (194)
T ss_dssp EEEECCCCC
T ss_pred CCccCCCCC
Confidence 33 45543
No 3
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.95 E-value=2.4e-09 Score=114.53 Aligned_cols=104 Identities=18% Similarity=0.172 Sum_probs=78.2
Q ss_pred CceeEeEEeCCCCCCCCCCC--CCCCcEEEEecCCCC---------HHHH----HHHHHHcCCcEEEEEeCCCcchhccc
Q 009527 78 KAFKLPAVLSNPLNCCSTAS--KLSGSIALSMRGDCA---------FTTK----AEVAQAAGAAALVVINDEEDLYKMVC 142 (532)
Q Consensus 78 ~a~~~~Lv~~~p~daC~~~~--~l~g~IaLV~RG~Cs---------F~~K----a~nAq~aGA~avIV~n~~~~l~~m~~ 142 (532)
.+.+++++.+++.++|+... +++|||||++||.|. |..| +.+|+++||+|+|++|+.++...+.+
T Consensus 104 ~~vta~lV~v~~~~~~~~~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~ 183 (444)
T 3iib_A 104 QGLSATIVRFDTLQDLQNAEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAH 183 (444)
T ss_dssp TCEEEEEEEESSHHHHHTSCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCC
T ss_pred CCeEEEEEecCCHHHHhhccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCccccccc
Confidence 35789999887666776543 899999999999996 6677 46799999999999997543222222
Q ss_pred CC--CCCCCcccceEEEechHhHHHHHHHhcccceEEEEee
Q 009527 143 SE--NDTALNISIPVLMIPKSRGDALNKSIADKQRVELLLY 181 (532)
Q Consensus 143 ~~--~~~~~~i~IPvv~Is~~~G~~L~~~l~~G~~V~V~l~ 181 (532)
.+ ........||++.|++++|+.|++.++.|+++++++.
T Consensus 184 tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~ 224 (444)
T 3iib_A 184 TGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLE 224 (444)
T ss_dssp CCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEE
Confidence 11 0111246899999999999999999988877766665
No 4
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.80 E-value=3.7e-08 Score=104.36 Aligned_cols=96 Identities=22% Similarity=0.287 Sum_probs=70.5
Q ss_pred eeEeEEeCCCCCCCCCCC--CCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCcchhcccCCCCCCCcccceEEE
Q 009527 80 FKLPAVLSNPLNCCSTAS--KLSGSIALSMRGDCAFTTKAEVAQAAGAAALVVINDEEDLYKMVCSENDTALNISIPVLM 157 (532)
Q Consensus 80 ~~~~Lv~~~p~daC~~~~--~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avIV~n~~~~l~~m~~~~~~~~~~i~IPvv~ 157 (532)
.+++++..+.. ..++.+ +++|||||++||+|+|.+|+++|+++||+|+||||+.+........ + .....||++.
T Consensus 93 v~a~lv~~~~G-~~~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~--~-~~~~~IP~~~ 168 (421)
T 2ek8_A 93 VTAELVYVGLG-TTADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLG--G-SDASFVAAVG 168 (421)
T ss_dssp EEEEEEECTTC-CTTTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCS--S-CCTTCCEEEE
T ss_pred cceEEEECCCC-ChhhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccC--C-CCCCCccEEE
Confidence 57788765422 223333 7999999999999999999999999999999999986432211111 1 1346899999
Q ss_pred echHhHHHHHHHh---cccceEEEEe
Q 009527 158 IPKSRGDALNKSI---ADKQRVELLL 180 (532)
Q Consensus 158 Is~~~G~~L~~~l---~~G~~V~V~l 180 (532)
|++++++.|.+.+ +.| ++++++
T Consensus 169 Is~~~a~~L~~~l~~~~~g-~~~v~l 193 (421)
T 2ek8_A 169 ITKQEGDALAANLRAGEKI-TATVKV 193 (421)
T ss_dssp ECHHHHHHHHHHHHTTCCC-EEEEEE
T ss_pred eCHHHHHHHHHHhhhhccC-Cccccc
Confidence 9999999999988 444 344444
No 5
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.36 E-value=7.9e-07 Score=100.19 Aligned_cols=91 Identities=21% Similarity=0.193 Sum_probs=66.6
Q ss_pred eeEeEEeCCCCCCCCC-C-------C-CCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCcc-------hh----
Q 009527 80 FKLPAVLSNPLNCCST-A-------S-KLSGSIALSMRGDCAFTTKAEVAQAAGAAALVVINDEEDL-------YK---- 139 (532)
Q Consensus 80 ~~~~Lv~~~p~daC~~-~-------~-~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avIV~n~~~~l-------~~---- 139 (532)
.+++++.++ .||.. . . +++|||||++||+|+|.+|+++||++||+|+|||||..+. ++
T Consensus 127 v~g~lV~v~--~G~~~Df~~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~ 204 (707)
T 3fed_A 127 PEGDLVYVN--YARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWN 204 (707)
T ss_dssp CEECEEECT--TCCHHHHHHHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSB
T ss_pred eEEEEEEec--CCchhhHHHHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCcc
Confidence 678998874 46621 1 2 5899999999999999999999999999999999974211 00
Q ss_pred -------------cccCCC-CC-----------------CCcccceEEEechHhHHHHHHHhcc
Q 009527 140 -------------MVCSEN-DT-----------------ALNISIPVLMIPKSRGDALNKSIAD 172 (532)
Q Consensus 140 -------------m~~~~~-~~-----------------~~~i~IPvv~Is~~~G~~L~~~l~~ 172 (532)
+.+.++ .+ .....||++-|+.++|+.|.+.+..
T Consensus 205 ~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 205 LPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CCCccccccceecccCCCCCCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 000000 00 0135899999999999999998863
No 6
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.32 E-value=1e-06 Score=98.29 Aligned_cols=90 Identities=18% Similarity=0.230 Sum_probs=65.0
Q ss_pred eeEeEEeCCCCCCCCC----CC-CCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCcc-h-----------hccc
Q 009527 80 FKLPAVLSNPLNCCST----AS-KLSGSIALSMRGDCAFTTKAEVAQAAGAAALVVINDEEDL-Y-----------KMVC 142 (532)
Q Consensus 80 ~~~~Lv~~~p~daC~~----~~-~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avIV~n~~~~l-~-----------~m~~ 142 (532)
.+++++.++ .||.. +. +++|||||++||+|+|.+|+++|+++||+|+||||+..+. . ....
T Consensus 108 v~g~lV~vg--~G~~~D~~~l~vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~ 185 (640)
T 3kas_A 108 VTGKLVHAN--FGTKKDFEDLYTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGT 185 (640)
T ss_dssp EEECEEECT--TCCHHHHHTCSSCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSS
T ss_pred eEEEEEEec--CCChhhHHHhhcccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCC
Confidence 578888774 45521 11 5889999999999999999999999999999999986321 0 0000
Q ss_pred CCC-C---------------CCCcccceEEEechHhHHHHHHHhc
Q 009527 143 SEN-D---------------TALNISIPVLMIPKSRGDALNKSIA 171 (532)
Q Consensus 143 ~~~-~---------------~~~~i~IPvv~Is~~~G~~L~~~l~ 171 (532)
++. . ......||++.|++++++.|.+.+.
T Consensus 186 Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 186 GDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp SCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 000 0 0112479999999999999988764
No 7
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=98.20 E-value=2.3e-06 Score=95.76 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=76.7
Q ss_pred eeEeEEeCCCCCCCCCCC----CC--CCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCcchhcccCCCCCCCcccc
Q 009527 80 FKLPAVLSNPLNCCSTAS----KL--SGSIALSMRGDCAFTTKAEVAQAAGAAALVVINDEEDLYKMVCSENDTALNISI 153 (532)
Q Consensus 80 ~~~~Lv~~~p~daC~~~~----~l--~g~IaLV~RG~CsF~~Ka~nAq~aGA~avIV~n~~~~l~~m~~~~~~~~~~i~I 153 (532)
...+++.....+.|.+.. .+ +|||+|++||.|++.+|..+++++||.++|++|+.+... . ....+
T Consensus 257 ~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~---~------~~~~~ 327 (649)
T 3i6s_A 257 RDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFR---S------ATFPN 327 (649)
T ss_dssp EEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGG---C------CCCCS
T ss_pred cceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccccc---c------ccCcC
Confidence 467888777788998754 34 999999999999999999999999999999999873221 1 23579
Q ss_pred eEEEechHhHHHHHHHhcccceEEEEee
Q 009527 154 PVLMIPKSRGDALNKSIADKQRVELLLY 181 (532)
Q Consensus 154 Pvv~Is~~~G~~L~~~l~~G~~V~V~l~ 181 (532)
|+++|++++|+.|++.++.+++.++++.
T Consensus 328 P~~~v~~~~g~~i~~yi~s~~~~~a~i~ 355 (649)
T 3i6s_A 328 PGVVVNKKEGKQVINYVKNSVTPTATIT 355 (649)
T ss_dssp CEEEECHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CEEEEcHHHHHHHHHHHhcCCCceEEEe
Confidence 9999999999999999998776555553
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=98.10 E-value=5e-06 Score=88.52 Aligned_cols=112 Identities=19% Similarity=0.301 Sum_probs=75.2
Q ss_pred CCCCCCC------CCCCcEEEEecCCC-----CHHHHHHHHHHcCCcEEEEEeCCCcc--hh-cccCCCCCCCcccceEE
Q 009527 91 NCCSTAS------KLSGSIALSMRGDC-----AFTTKAEVAQAAGAAALVVINDEEDL--YK-MVCSENDTALNISIPVL 156 (532)
Q Consensus 91 daC~~~~------~l~g~IaLV~RG~C-----sF~~Ka~nAq~aGA~avIV~n~~~~l--~~-m~~~~~~~~~~i~IPvv 156 (532)
+.|.+.+ +++|||+|++||+| ++.+|+.+++++||+++|+|||.+.. .. ... +......||++
T Consensus 258 ~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~---~~~~~~~~p~~ 334 (441)
T 1y9z_A 258 AECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLV---DANSDITVPSV 334 (441)
T ss_dssp EEEEEETTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEE---CTTCCCCSCEE
T ss_pred hccccccccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCcccccccccc---ccccCccccEE
Confidence 5686542 78999999999987 89999999999999999999986421 00 000 11234689999
Q ss_pred EechHhHHHHHHHhcccceEEEEeecCCCCCcchhhHHHHHHHHHHH--HHHHHHhh
Q 009527 157 MIPKSRGDALNKSIADKQRVELLLYAPNRPDVDFAVIFLWMMAVGTI--IAAALWSL 211 (532)
Q Consensus 157 ~Is~~~G~~L~~~l~~G~~V~V~l~~p~~p~vD~s~~~l~lmAv~tI--~~gs~~S~ 211 (532)
+|++++|++|++.+ +++++++.... -+|....-..||...+ +.+-+++.
T Consensus 335 ~v~~~~g~~l~~~~--~~~~t~~~~~~----~~y~~~sGTSmAaP~VAG~aALl~~~ 385 (441)
T 1y9z_A 335 SVDRATGLALKAKL--GQSTTVSNQGN----QDYEYYNGTSMATPHVSGVATLVWSY 385 (441)
T ss_dssp EECHHHHHHHHTTT--TSEEEEEEEEE----ESEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred EEeHHHHHHHHHHh--cCCcccccccC----CCceeecccccCCcccchHHHHHHHH
Confidence 99999999999887 55566554311 1233333444555444 34445554
No 9
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=97.94 E-value=3e-05 Score=90.00 Aligned_cols=90 Identities=20% Similarity=0.320 Sum_probs=68.9
Q ss_pred eEeEEeCCCCCCCCCCC--CCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCcchhcccCCCCCCCcccceEEEe
Q 009527 81 KLPAVLSNPLNCCSTAS--KLSGSIALSMRGDCAFTTKAEVAQAAGAAALVVINDEEDLYKMVCSENDTALNISIPVLMI 158 (532)
Q Consensus 81 ~~~Lv~~~p~daC~~~~--~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avIV~n~~~~l~~m~~~~~~~~~~i~IPvv~I 158 (532)
..+++... ++|.+.. +++|||+|++||.|+|.+|+.+++++||.++|++|+......+... ....+|+++|
T Consensus 261 ~~~lv~~~--~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~-----~~~~iP~~~i 333 (926)
T 1xf1_A 261 AYDYAYAN--RGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELP-----NVDQMPAAFI 333 (926)
T ss_dssp CEEEEECT--TSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECC-----CSTTCCEEEE
T ss_pred eEEEEECC--CCCCccchhhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccC-----ccccccEEEE
Confidence 46676553 5786544 8999999999999999999999999999999999986432221111 2457999999
Q ss_pred chHhHHHHHHHhcccceEEEEee
Q 009527 159 PKSRGDALNKSIADKQRVELLLY 181 (532)
Q Consensus 159 s~~~G~~L~~~l~~G~~V~V~l~ 181 (532)
++++|+.|+. +...++++.
T Consensus 334 ~~~~g~~l~~----~~~~ti~~~ 352 (926)
T 1xf1_A 334 SRKDGLLLKD----NPQKTITFN 352 (926)
T ss_dssp CHHHHHHHHH----CSSCEEEEC
T ss_pred eHHHHHHHHh----CCceEEEec
Confidence 9999998874 445566653
No 10
>2kr6_A Presenilin-1; protease, alternative splicing, alzheimer disease, amyloidos apoptosis, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=96.80 E-value=0.0019 Score=59.96 Aligned_cols=67 Identities=28% Similarity=0.345 Sum_probs=55.4
Q ss_pred cccCCCccchhhHHHHHHh--h-hccccccCcccchHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhhHHHHHH
Q 009527 429 DMIGFGDILFPGLLICFAF--R-YDKENKKGVVKGYFLWLIIGYGFGLFLTYLGLYLMNGHGQPALLYLVPCTLGLTVIL 505 (532)
Q Consensus 429 s~LGlGDIviPGl~i~~~~--r-fD~~~~~~~~~~YF~~~~~gY~~GL~~t~~~~~~~~~~~QPALlYlvP~~l~~~~~~ 505 (532)
--|||||-|+=+++++-+. + +|+. =...|++|..+||.+|.+.+.++ +++-|||.. |..++.++.+
T Consensus 88 ikLGLGDFIFYSvLVgkAa~~~~~d~~--------t~~ac~vaIL~GL~~TL~lLa~~-~~aLPALPi--SI~lG~~fyf 156 (176)
T 2kr6_A 88 VKLGLGDFIFYSVLVGKASATASGDWN--------TTIACFVAILIGLCLTLLLLAIF-KKALPALPI--SITFGLVFYF 156 (176)
T ss_dssp CSSCTTTHHHHHHHHHHHHHHSCCTTT--------THHHHHHHHHHHHHHHHHHHHHH-TCSCSSSSS--CCCCHHHHHH
T ss_pred ccccccCeeehHHHHHHHHHhhccCHH--------HHHHHHHHHHHHHHHHHHHHhhh-cccCCCCcH--HHHHHHHHHH
Confidence 4599999999999999887 5 3663 26789999999999999999998 899999987 6666665544
Q ss_pred H
Q 009527 506 G 506 (532)
Q Consensus 506 a 506 (532)
+
T Consensus 157 ~ 157 (176)
T 2kr6_A 157 A 157 (176)
T ss_dssp H
T ss_pred H
Confidence 4
No 11
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=90.19 E-value=0.37 Score=53.27 Aligned_cols=72 Identities=19% Similarity=0.254 Sum_probs=56.0
Q ss_pred CCCCCCC----CCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCcchhcccCCCCCCCcccceEEEechHhHHHH
Q 009527 91 NCCSTAS----KLSGSIALSMRGDCAFTTKAEVAQAAGAAALVVINDEEDLYKMVCSENDTALNISIPVLMIPKSRGDAL 166 (532)
Q Consensus 91 daC~~~~----~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avIV~n~~~~l~~m~~~~~~~~~~i~IPvv~Is~~~G~~L 166 (532)
..|.+.. ..+|||++++|+ +..|..+++.+||.++|++|+..+. .....+|.+.++.++|..+
T Consensus 268 ~~~~~~~~~~~~v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~~----------~~~~~lP~~~v~~~~g~~i 334 (621)
T 3vta_A 268 RFCTDKSVNPNLLKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRDY----------ADSYPLPSSVLDPNDLLAT 334 (621)
T ss_dssp TTTCTTCSCGGGTTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCSS----------CCCCSSSEEEECHHHHHHH
T ss_pred ccccccccccccccceEEEEecC---CChhHHhhhhcceeEEEEEecCCCc----------ccccccceEEECHHHHHHH
Confidence 4565544 689999998754 6689999999999999999986432 1245789999999999999
Q ss_pred HHHhcccce
Q 009527 167 NKSIADKQR 175 (532)
Q Consensus 167 ~~~l~~G~~ 175 (532)
++.+.....
T Consensus 335 ~~~~~~~~~ 343 (621)
T 3vta_A 335 LRYIYSIRS 343 (621)
T ss_dssp HHHHHHHSS
T ss_pred HHHHhccCC
Confidence 888765443
Done!