Your job contains 1 sequence.
>009530
MGRNSKKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRS
FGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFT
ITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKM
ILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAI
PRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYE
SSNDADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMND
VAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLA
ETDLDKIAKAKLVNIVKEEEAVCGNKEKDPSDCMKQSESLSKDIKLSTENNEAACAKEVK
QPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009530
(532 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2114870 - symbol:AT3G04820 species:3702 "Arabi... 1848 1.1e-190 1
ZFIN|ZDB-GENE-060620-1 - symbol:pus7 "pseudouridylate syn... 588 4.6e-86 3
DICTYBASE|DDB_G0271632 - symbol:pus7 "tRNA pseudouridine ... 765 6.5e-83 2
UNIPROTKB|F1ML88 - symbol:PUS7 "Pseudouridylate synthase ... 562 4.5e-82 3
UNIPROTKB|E2RAX2 - symbol:EFCAB10 "Uncharacterized protei... 562 4.5e-82 3
UNIPROTKB|F1NCJ9 - symbol:PUS7 "Uncharacterized protein" ... 554 9.4e-82 3
UNIPROTKB|Q08DI8 - symbol:PUS7 "Pseudouridylate synthase ... 558 1.2e-81 3
UNIPROTKB|G3N0P5 - symbol:PUS7 "Pseudouridylate synthase ... 554 3.1e-81 3
RGD|1307054 - symbol:Pus7 "pseudouridylate synthase 7 hom... 554 6.5e-81 3
SGD|S000005769 - symbol:PUS7 "Pseudouridine synthase" spe... 710 1.8e-76 2
POMBASE|SPBC1A4.09 - symbol:SPBC1A4.09 "pseudouridine syn... 628 4.2e-69 2
CGD|CAL0000869 - symbol:PUS7 species:5476 "Candida albica... 476 4.5e-67 3
UNIPROTKB|Q96PZ0 - symbol:PUS7 "Pseudouridylate synthase ... 567 2.3e-64 2
FB|FBgn0035901 - symbol:CG6745 species:7227 "Drosophila m... 545 3.8e-60 2
ASPGD|ASPL0000061146 - symbol:AN0984 species:162425 "Emer... 351 3.8e-60 3
UNIPROTKB|F1SB38 - symbol:PUS7 "Uncharacterized protein" ... 368 4.2e-55 3
UNIPROTKB|Q9H0K6 - symbol:PUS7L "Pseudouridylate synthase... 422 7.8e-54 3
UNIPROTKB|F1SGY7 - symbol:PUS7L "Uncharacterized protein"... 423 3.3e-53 3
UNIPROTKB|B3KUJ1 - symbol:PUS7L "Pseudouridylate synthase... 399 3.7e-53 3
UNIPROTKB|E1BGT6 - symbol:PUS7L "Uncharacterized protein"... 424 6.7e-53 3
UNIPROTKB|F1P2N1 - symbol:PUS7L "Uncharacterized protein"... 409 1.2e-52 3
MGI|MGI:1926145 - symbol:Pus7l "pseudouridylate synthase ... 434 1.6e-52 3
UNIPROTKB|E2RCQ4 - symbol:PUS7L "Uncharacterized protein"... 417 4.1e-52 3
WB|WBGene00007101 - symbol:B0024.11 species:6239 "Caenorh... 406 4.8e-48 3
UNIPROTKB|E7EUH7 - symbol:PUS7 "Pseudouridylate synthase ... 448 2.5e-42 1
UNIPROTKB|I3LL64 - symbol:PUS7 "Uncharacterized protein" ... 380 4.0e-35 1
UNIPROTKB|P60347 - symbol:truD "tRNA pseudouridine syntha... 320 1.8e-31 2
TIGR_CMR|GSU_0520 - symbol:GSU_0520 "conserved hypothetic... 320 1.8e-31 2
GENEDB_PFALCIPARUM|PF10_0341 - symbol:PF10_0341 "hypothet... 222 2.0e-31 2
UNIPROTKB|Q8IJ59 - symbol:PF10_0341 "tRNA pseudouridine s... 222 2.0e-31 2
UNIPROTKB|D4ABN2 - symbol:Pus7l "Protein Pus7l" species:1... 355 2.5e-30 1
ZFIN|ZDB-GENE-050419-188 - symbol:pus7l "pseudouridylate ... 235 4.6e-22 2
UNIPROTKB|F8VP66 - symbol:PUS7L "Pseudouridylate synthase... 228 3.4e-18 1
UNIPROTKB|F8VW99 - symbol:PUS7L "Pseudouridylate synthase... 228 3.4e-18 1
TIGR_CMR|CHY_1627 - symbol:CHY_1627 "tRNA pseudouridine s... 198 4.1e-15 3
TIGR_CMR|CJE_1631 - symbol:CJE_1631 "tRNA pseudouridine s... 192 3.0e-12 1
UNIPROTKB|Q8EBR4 - symbol:truD "tRNA pseudouridine syntha... 150 2.3e-11 3
TIGR_CMR|SO_3436 - symbol:SO_3436 "conserved hypothetical... 150 2.3e-11 3
UNIPROTKB|Q604M0 - symbol:truD "tRNA pseudouridine syntha... 154 2.4e-11 3
UNIPROTKB|Q57261 - symbol:truD "tRNA pseudouridine 13 syn... 147 2.9e-09 3
UNIPROTKB|Q487E7 - symbol:truD "tRNA pseudouridine syntha... 103 1.5e-07 3
TIGR_CMR|CPS_1074 - symbol:CPS_1074 "conserved hypothetic... 103 1.5e-07 3
UNIPROTKB|Q886L6 - symbol:truD "tRNA pseudouridine syntha... 105 2.4e-06 3
UNIPROTKB|H0Y863 - symbol:PUS7 "Pseudouridylate synthase ... 113 8.9e-06 1
UNIPROTKB|Q9KUJ0 - symbol:truD "tRNA pseudouridine syntha... 112 0.00052 3
TIGR_CMR|VC_0530 - symbol:VC_0530 "conserved hypothetical... 112 0.00052 3
UNIPROTKB|F8VZA0 - symbol:PUS7L "Pseudouridylate synthase... 118 0.00053 1
>TAIR|locus:2114870 [details] [associations]
symbol:AT3G04820 species:3702 "Arabidopsis thaliana"
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009451 "RNA modification" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA;TAS] [GO:0000741
"karyogamy" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR017091 InterPro:IPR020103
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS50984 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003723 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 UniGene:At.17651 UniGene:At.50988 eggNOG:COG0585
KO:K06176 PANTHER:PTHR13326 TIGRFAMs:TIGR00094 HOGENOM:HOG000203484
EMBL:AY735600 EMBL:AY954844 IPI:IPI00520898 RefSeq:NP_187133.3
ProteinModelPortal:Q5XVC2 SMR:Q5XVC2 STRING:Q5XVC2 PaxDb:Q5XVC2
PRIDE:Q5XVC2 EnsemblPlants:AT3G04820.1 GeneID:819642
KEGG:ath:AT3G04820 TAIR:At3g04820 InParanoid:Q5XVC2 OMA:HGLRLGD
PhylomeDB:Q5XVC2 ProtClustDB:CLSN2699157 Genevestigator:Q5XVC2
Uniprot:Q5XVC2
Length = 715
Score = 1848 (655.6 bits), Expect = 1.1e-190, P = 1.1e-190
Identities = 369/531 (69%), Positives = 422/531 (79%)
Query: 2 GRNSKKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSF 61
G SKKRKERGD PFDSRGSE+WPE +GKFLRFHLYKENKDTQEALGLI KMLG+ P+SF
Sbjct: 199 GNRSKKRKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSF 258
Query: 62 GFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTI 121
GF+GTKDKRSVSTQRVTVFKQ+ASKLAALNKRL GI++GDFC VKEGLLLGQL+GNRFTI
Sbjct: 259 GFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVKEGLLLGQLMGNRFTI 318
Query: 122 TLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMI 181
TLRGVV DSE+ IK SA SLG++GFINYFGLQRFGSGSVPTH VGA LL+GEWK AV MI
Sbjct: 319 TLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDAVDMI 378
Query: 182 LDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIP 241
LDPRE ER+ ++ AREYYKET DIDGTLR+LPR+LVAERAILQCLKKCPGNYLQALK IP
Sbjct: 379 LDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIP 438
Query: 242 RTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYES 301
RTLRMMYVHSYQS+LWN+AAS RV+ +GT VV+GDLV K D ++ + + E ES
Sbjct: 439 RTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTKVDAAKRMVDSLTSEHN-ES 497
Query: 302 SNDADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDV 361
S +A D +D+ D P R +LVK V+ D+ +G Y+ D+VLPLPGSRVIYP ND+
Sbjct: 498 SEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDI 557
Query: 362 AEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAE 421
AE+YH LA+KDGI+LTES+H VKEFSITSMTG YRRVFQKP+DFEWELLTY D NKPLAE
Sbjct: 558 AEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAE 617
Query: 422 TDLDKIAKAKLVNIVKEEEAVCGNKEKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQ 481
TDLD+I K V V E + K ++ E+ KD T++NEA K+
Sbjct: 618 TDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHDSGETNLKD---QTDSNEAE--KDTGN 672
Query: 482 PHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
P DS+ QMALK+ LTLPSSCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 673 P--------DSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715
>ZFIN|ZDB-GENE-060620-1 [details] [associations]
symbol:pus7 "pseudouridylate synthase 7 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0009451 "RNA modification" evidence=IEA]
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001374
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR017091
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984 PROSITE:PS51061
ZFIN:ZDB-GENE-060620-1 GO:GO:0003723 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 KO:K06176 PANTHER:PTHR13326 TIGRFAMs:TIGR00094
GeneTree:ENSGT00530000063554 CTD:54517 HOGENOM:HOG000203484
HOVERGEN:HBG056990 OMA:HPLKLGE EMBL:CU855936 EMBL:BC160612
IPI:IPI00882639 RefSeq:NP_001116170.1 UniGene:Dr.14734
STRING:B1H1H9 Ensembl:ENSDART00000040499 GeneID:402995
KEGG:dre:402995 NextBio:20816802 Uniprot:B1H1H9
Length = 627
Score = 588 (212.0 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 120/263 (45%), Positives = 161/263 (61%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G F F LYKENKDT EA+ ++S+ L + P F + GTKDKR++S Q + V K
Sbjct: 215 SWPKNRGSFCHFVLYKENKDTMEAINILSRFLRVRPNMFSYMGTKDKRAISVQEIAVLKI 274
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +L+ LNK L+ ++LG+FCY K L LG+L GN FT+ LR + + V +A NSL
Sbjct: 275 SAERLSHLNKCLMNLKLGNFCYKKHPLKLGELQGNHFTVVLRNISGSQQQVDQAM-NSLQ 333
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
GFINY+G+QRFG+ +VPTH VG +L+ WK V +IL PR G E+ + K RE +
Sbjct: 334 NTGFINYYGMQRFGTTAVPTHRVGRAILQNNWKEVVDLILKPRPGAEKGYLVKCREEWAR 393
Query: 202 TDDIDGTLRKLPRHLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
T D LRKLP E +L+ L K N + A IPR R+MY+HSYQS++WN
Sbjct: 394 TQDPAAALRKLPVKRCVEGQLLRGLAKHGKHNIITAFALIPRNNRLMYIHSYQSYVWNSM 453
Query: 261 ASARVQKHGTEHVVVGDLVFCKG 283
S RV +G V GDL+ G
Sbjct: 454 VSRRVDAYGLR-AVEGDLILRGG 475
Score = 198 (74.8 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 44/117 (37%), Positives = 64/117 (54%)
Query: 330 VTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSIT 389
V +AD + K++I DVV+PLPG VIYP + V + Y + D +++ H V+++S+
Sbjct: 479 VLSAD-EAQKHSIHDVVMPLPGFDVIYPTHSVGQGYREMLSADDLDIDNMRHKVRDYSLA 537
Query: 390 SMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKAKLVNIVKEEEAVCGNK 446
G YRRV +P D WEL+ Y D PL TDL+K+ K + E C K
Sbjct: 538 ---GAYRRVLIRPSDVSWELVQYDDPRVPLVHTDLEKLEN-KPAPVYLTEGKYCALK 590
Score = 107 (42.7 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
++GK ALK+ +LPSS YATMA+RE+LK TS+ LN
Sbjct: 582 TEGKYCALKMEFSLPSSTYATMAVREVLKMDTSIKNQTQLN 622
Score = 38 (18.4 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 298 EYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKY 340
E E D ++ +E PE + + +T AD+ ++
Sbjct: 31 EEEPQEDEEEEPQEEEEPEEEEESFADMMKHGLTEADVGIHRF 73
>DICTYBASE|DDB_G0271632 [details] [associations]
symbol:pus7 "tRNA pseudouridine synthase D"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0009451 "RNA modification" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984
dictyBase:DDB_G0271632 GO:GO:0005615 GenomeReviews:CM000151_GR
GO:GO:0003723 EMBL:AAFI02000006 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 OMA:HPLKLGE RefSeq:XP_645579.1
ProteinModelPortal:Q86JH5 STRING:Q86JH5 PRIDE:Q86JH5
EnsemblProtists:DDB0304449 GeneID:8618032 KEGG:ddi:DDB_G0271632
InParanoid:Q86JH5 Uniprot:Q86JH5
Length = 729
Score = 765 (274.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 170/458 (37%), Positives = 263/458 (57%)
Query: 22 ENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFK 81
+ WP K++ F L KEN+DT + L ++S++L ++F FAGTKDKR ++TQRVTV+K
Sbjct: 223 QQWPIGKPKYVEFKLCKENRDTMDTLSMMSRILRNSEKNFSFAGTKDKRGITTQRVTVWK 282
Query: 82 QRASKLAALNKRLIG----IRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKAS 137
KL LN R+ +R+G++ +V+ L LG L GNRF+I +R + + +I S
Sbjct: 283 VTPEKLVELNNRISTLSPPVRIGEYRFVENHLRLGDLSGNRFSIVIREIQGADDQLITES 342
Query: 138 ANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKARE 197
+ + GFINYFG+QRFG+G++PT+ +G +++G W+ A K+ILDPR+GER++ +KAR
Sbjct: 343 IETFKKTGFINYFGMQRFGTGAIPTYEIGIAMIQGNWEKAAKLILDPRDGERDDATKARL 402
Query: 198 YYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLW 257
YYKET DI TL LPR L AER +L LK +Y A +IPRTLRM+Y HSYQS +W
Sbjct: 403 YYKETGDIKKTLTMLPRGLNAERKLLLGLKNGQSSYQDAFYSIPRTLRMLYTHSYQSLIW 462
Query: 258 NHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPET 317
N A+ R++ G +VGDLV + + + N E +++N+++D ET
Sbjct: 463 NLMATKRIELFGFNKPIVGDLVIISEESIDNKK---NEEESKDNNNNSNDGEEEIGGDET 519
Query: 318 DHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLT 377
+ + + V VT D+ + +YTI VVLPL G I P N + E+Y K I +
Sbjct: 520 EIEEKKVIKVDYVTEDDVKNDRYTIQQVVLPLIGGSTILPKNIIGELYVEELAKSNIQPS 579
Query: 378 ESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI-AKAKLVNIV 436
+ + K +I + G YR++ + D +++ Y D PLA +D++ + + V++
Sbjct: 580 QFIS--KNRAI-DLRGGYRKLLETAKDTTYKIFNYDDFTIPLALSDIEILKGSQEPVDVP 636
Query: 437 K-EEEAV--CGNKEKDPSDCMKQSESLSKDIKLSTENN 471
+ +AV C N M E L ++++ N
Sbjct: 637 NGKHKAVRVCFNLPSSTYATMAYREILKSSSDMTSQMN 674
Score = 85 (35.0 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 494 GKQMALKLGLTLPSSCYATMAIRELLKTSTSV 525
GK A+++ LPSS YATMA RE+LK+S+ +
Sbjct: 638 GKHKAVRVCFNLPSSTYATMAYREILKSSSDM 669
>UNIPROTKB|F1ML88 [details] [associations]
symbol:PUS7 "Pseudouridylate synthase 7 homolog"
species:9913 "Bos taurus" [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0001522 "pseudouridine synthesis" evidence=IEA]
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR017091
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554 IPI:IPI00807253
UniGene:Bt.28327 EMBL:DAAA02010541 ProteinModelPortal:F1ML88
Ensembl:ENSBTAT00000010180 Uniprot:F1ML88
Length = 659
Score = 562 (202.9 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 115/263 (43%), Positives = 165/263 (62%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ L+SK L + P F + GTKDKR+++ Q + V K
Sbjct: 247 SWPKSRGSYCHFVLYKENKDTMDAINLLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKI 306
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +LA LNK L+ +LG+F Y K L LG+L GN FT+ LR + +++ ++ + NSL
Sbjct: 307 TAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNIT-GTDNQVEQAMNSLK 365
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
GFINY+G+QRFG+ +VPT+ VG +L+ W + +IL PR G E+ + K RE + +
Sbjct: 366 EIGFINYYGMQRFGTTAVPTYQVGRAILQNSWAEVMDLILKPRSGAEKGYLVKCREEWAK 425
Query: 202 TDDIDGTLRKLPRHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
T D LRKLP E +L+ L K N + A IPR R+MY+HSYQS++WN+
Sbjct: 426 TKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNM 485
Query: 261 ASARVQKHGTEHVVVGDLVFCKG 283
S R+ ++G + V GDLV KG
Sbjct: 486 VSKRIDEYGLKPVP-GDLVL-KG 506
Score = 186 (70.5 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 334 DINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTG 393
D+N+ Y+I DVV+PLPG VIYP + ++E Y + D +++ H ++++S++ G
Sbjct: 516 DVNN--YSIHDVVMPLPGFDVIYPKHKISEAYREMLTADNLDIDNMRHKIRDYSLS---G 570
Query: 394 NYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
YR++ +P + WE++ Y D PL TD+D +
Sbjct: 571 AYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNL 604
Score = 107 (42.7 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
S+GK ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 614 SEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 654
>UNIPROTKB|E2RAX2 [details] [associations]
symbol:EFCAB10 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0008603 "cAMP-dependent protein kinase
regulator activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0001522
"pseudouridine synthesis" evidence=IEA] InterPro:IPR001656
InterPro:IPR003117 InterPro:IPR011760 InterPro:IPR017091
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984 GO:GO:0007165
GO:GO:0008603 GO:GO:0003723 SUPFAM:SSF47391 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 GeneTree:ENSGT00390000010932
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 OMA:HPLKLGE EMBL:AAEX03011228
EMBL:AAEX03011229 Ensembl:ENSCAFT00000006466 NextBio:20857685
Uniprot:E2RAX2
Length = 764
Score = 562 (202.9 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 114/263 (43%), Positives = 166/263 (63%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ ++SK L + P F + GTKDKR+++ Q + V K
Sbjct: 352 SWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKI 411
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +LA LNK L+ +LG+F Y K L LG+L GN FT+ LR + ++D ++ + NSL
Sbjct: 412 SAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNIT-GTDDQVQQAMNSLK 470
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
GFINY+G+QRFG+ +VPT+ VG +L+ W + +IL PR G E+ + K RE + +
Sbjct: 471 EIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAK 530
Query: 202 TDDIDGTLRKLPRHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
+ D LRKLP E +L+ L K N + A IPR R+MY+HSYQS++WN+
Sbjct: 531 SKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNM 590
Query: 261 ASARVQKHGTEHVVVGDLVFCKG 283
S R++++G + V GDLV KG
Sbjct: 591 VSKRIEEYGLKPVP-GDLVL-KG 611
Score = 186 (70.5 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 334 DINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTG 393
D+N+ Y+I DVV+PLPG VIYP + ++E Y + D +++ H ++++S++ G
Sbjct: 621 DVNN--YSIHDVVMPLPGFDVIYPKHKISEAYREMLTADNLDIDNMRHKIRDYSLS---G 675
Query: 394 NYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
YR++ +P + WE++ Y D PL TD+D +
Sbjct: 676 AYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNL 709
Score = 107 (42.7 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
S+GK ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 719 SEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 759
>UNIPROTKB|F1NCJ9 [details] [associations]
symbol:PUS7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001522 "pseudouridine synthesis" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009982 "pseudouridine
synthase activity" evidence=IEA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR017091 InterPro:IPR020103
InterPro:IPR020119 Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268
PROSITE:PS50984 GO:GO:0003723 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 PANTHER:PTHR13326 TIGRFAMs:TIGR00094
GeneTree:ENSGT00530000063554 OMA:HPLKLGE EMBL:AADN02036877
IPI:IPI00590205 Ensembl:ENSGALT00000013198 Uniprot:F1NCJ9
Length = 656
Score = 554 (200.1 bits), Expect = 9.4e-82, Sum P(3) = 9.4e-82
Identities = 111/263 (42%), Positives = 164/263 (62%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ ++SK L + P F + GTKDKR+++ Q + V +
Sbjct: 244 SWPKSRGSYCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVLRI 303
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +LA LNK L+ +LG+F Y L LG+L GN FT+ LR + ++D I+ + NSL
Sbjct: 304 TAQRLAHLNKCLMNFKLGNFSYKNHPLKLGELQGNHFTVVLRNIT-GTDDQIEQAMNSLR 362
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
GFINY+G+QRFG+ +VPT+ +G +L+ W + +IL PR G E+ + K RE + +
Sbjct: 363 EIGFINYYGMQRFGTTAVPTYQIGRAILQNNWNEVMDLILKPRPGAEKGYLVKCREEWAK 422
Query: 202 TDDIDGTLRKLPRHLVAERAILQ-CLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
T D L+KLP E +L+ LK N + A IPR R+MY+HSYQS++WN+
Sbjct: 423 TKDPAAALKKLPVKRCVEGQLLRGLLKYGMKNIISAFGIIPRNNRLMYIHSYQSYVWNNM 482
Query: 261 ASARVQKHGTEHVVVGDLVFCKG 283
S R++++G + V GDL KG
Sbjct: 483 VSKRIEEYGLK-AVPGDLTL-KG 503
Score = 199 (75.1 bits), Expect = 9.4e-82, Sum P(3) = 9.4e-82
Identities = 39/104 (37%), Positives = 60/104 (57%)
Query: 327 VKTVTAADINSG---KYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNV 383
+K TA I G YTI DVV+PLPG VIYP + + E Y + D +++ H +
Sbjct: 501 LKGATAVHIEEGDVHNYTIHDVVMPLPGFDVIYPKHKIGEAYKEMLVADNLDINNMRHKI 560
Query: 384 KEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
+++S++ G YR++ +P + WE++ Y D PL TDLDK+
Sbjct: 561 RDYSLS---GAYRKIIIRPQNVSWEVVAYDDPRIPLFTTDLDKL 601
Score = 99 (39.9 bits), Expect = 9.4e-82, Sum P(3) = 9.4e-82
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
+ GK ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 611 TDGKFRALKMEFSLPPSTYATMAIREVLKMDTSIKNQTQLN 651
>UNIPROTKB|Q08DI8 [details] [associations]
symbol:PUS7 "Pseudouridylate synthase 7 homolog"
species:9913 "Bos taurus" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0001522
"pseudouridine synthesis" evidence=IEA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR017091 InterPro:IPR020103
InterPro:IPR020119 Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268
PROSITE:PS50984 GO:GO:0003723 GO:GO:0008033 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 EMBL:BC123723 IPI:IPI00807253
RefSeq:NP_001070407.1 UniGene:Bt.28327 ProteinModelPortal:Q08DI8
STRING:Q08DI8 PRIDE:Q08DI8 GeneID:615644 KEGG:bta:615644 CTD:54517
HOGENOM:HOG000203484 HOVERGEN:HBG056990 InParanoid:Q08DI8
OrthoDB:EOG4DR9BV NextBio:20899714 Uniprot:Q08DI8
Length = 659
Score = 558 (201.5 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 114/263 (43%), Positives = 165/263 (62%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ L+SK L + P F + GTKDKR+++ Q + V K
Sbjct: 247 SWPKSRGSYCHFVLYKENKDTMDAINLLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKI 306
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +LA LNK L+ +LG+F Y K L LG+L GN FT+ LR + +++ ++ + NSL
Sbjct: 307 TAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNIT-GTDNQVEQAMNSLK 365
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
GFINY+G+QRFG+ +VPT+ VG +L+ W + +IL PR G E+ + K RE + +
Sbjct: 366 EIGFINYYGMQRFGTTAVPTYQVGRAILQNSWAEVMDLILKPRSGAEKGYLVKCREEWAK 425
Query: 202 TDDIDGTLRKLPRHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
+ D LRKLP E +L+ L K N + A IPR R+MY+HSYQS++WN+
Sbjct: 426 SKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNM 485
Query: 261 ASARVQKHGTEHVVVGDLVFCKG 283
S R+ ++G + V GDLV KG
Sbjct: 486 VSKRIDEYGLKPVP-GDLVL-KG 506
Score = 186 (70.5 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 334 DINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTG 393
D+N+ Y+I DVV+PLPG VIYP + ++E Y + D +++ H ++++S++ G
Sbjct: 516 DVNN--YSIHDVVMPLPGFDVIYPKHKISEAYREMLTADNLDIDNMRHKIRDYSLS---G 570
Query: 394 NYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
YR++ +P + WE++ Y D PL TD+D +
Sbjct: 571 AYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNL 604
Score = 107 (42.7 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
S+GK ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 614 SEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 654
>UNIPROTKB|G3N0P5 [details] [associations]
symbol:PUS7 "Pseudouridylate synthase 7 homolog"
species:9913 "Bos taurus" [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0001522 "pseudouridine synthesis" evidence=IEA]
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR017091
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554 OMA:HPLKLGE
EMBL:DAAA02010541 Ensembl:ENSBTAT00000064991 Uniprot:G3N0P5
Length = 731
Score = 554 (200.1 bits), Expect = 3.1e-81, Sum P(3) = 3.1e-81
Identities = 115/266 (43%), Positives = 166/266 (62%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGIL---PRSFGFAGTKDKRSVSTQRVTV 79
+WP+ G + F LYKENKDT +A+ L+SK L ++ P F + GTKDKR+++ Q + V
Sbjct: 316 SWPKSRGSYCHFVLYKENKDTMDAINLLSKYLSLIRVKPNIFSYMGTKDKRAITVQEIAV 375
Query: 80 FKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASAN 139
K A +LA LNK L+ +LG+F Y K L LG+L GN FT+ LR + +++ ++ + N
Sbjct: 376 LKITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNIT-GTDNQVEQAMN 434
Query: 140 SLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREY 198
SL GFINY+G+QRFG+ +VPT+ VG +L+ W + +IL PR G E+ + K RE
Sbjct: 435 SLKEIGFINYYGMQRFGTTAVPTYQVGRAILQNSWAEVMDLILKPRSGAEKGYLVKCREE 494
Query: 199 YKETDDIDGTLRKLPRHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLW 257
+ +T D LRKLP E +L+ L K N + A IPR R+MY+HSYQS++W
Sbjct: 495 WAKTKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVW 554
Query: 258 NHAASARVQKHGTEHVVVGDLVFCKG 283
N+ S R+ ++G + V GDLV KG
Sbjct: 555 NNMVSKRIDEYGLKPVP-GDLVL-KG 578
Score = 186 (70.5 bits), Expect = 3.1e-81, Sum P(3) = 3.1e-81
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 334 DINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTG 393
D+N+ Y+I DVV+PLPG VIYP + ++E Y + D +++ H ++++S++ G
Sbjct: 588 DVNN--YSIHDVVMPLPGFDVIYPKHKISEAYREMLTADNLDIDNMRHKIRDYSLS---G 642
Query: 394 NYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
YR++ +P + WE++ Y D PL TD+D +
Sbjct: 643 AYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNL 676
Score = 107 (42.7 bits), Expect = 3.1e-81, Sum P(3) = 3.1e-81
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
S+GK ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 686 SEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 726
>RGD|1307054 [details] [associations]
symbol:Pus7 "pseudouridylate synthase 7 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0001522 "pseudouridine
synthesis" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR017091
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984 RGD:1307054
GO:GO:0003723 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554
OMA:HPLKLGE IPI:IPI00363995 Ensembl:ENSRNOT00000014063
Uniprot:D4ADZ9
Length = 660
Score = 554 (200.1 bits), Expect = 6.5e-81, Sum P(3) = 6.5e-81
Identities = 115/263 (43%), Positives = 164/263 (62%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ ++SK L + P F + GTKDKR+++ Q + V K
Sbjct: 248 SWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKI 307
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +LA LNK L+ +LG+F Y K L LG+L GN FT+ LR + E V +A +SL
Sbjct: 308 SAQRLAHLNKCLMNFKLGNFSYQKTPLKLGELQGNHFTVVLRNITGTDEQVQQAM-HSLQ 366
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
+ GFINY+G+QRFG+ +VPT+ VG ++L+ W + +IL PR G E+ + K RE + +
Sbjct: 367 QTGFINYYGMQRFGTTAVPTYQVGRSILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAK 426
Query: 202 TDDIDGTLRKLPRHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
T D L+KLP E +L+ L K N + A IPR R+MY+HSYQS++WN
Sbjct: 427 TKDPASALKKLPVKRCVEGQLLRGLSKYGLKNIVSAFGIIPRNNRLMYIHSYQSYVWNSM 486
Query: 261 ASARVQKHGTEHVVVGDLVFCKG 283
S R++ +G + V GDLV KG
Sbjct: 487 VSRRIELYGLKPVP-GDLVL-KG 507
Score = 186 (70.5 bits), Expect = 6.5e-81, Sum P(3) = 6.5e-81
Identities = 34/94 (36%), Positives = 57/94 (60%)
Query: 334 DINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTG 393
DIN+ Y+I DVV+PLPG VIYP + ++E Y + D +++ H ++++S++ G
Sbjct: 517 DINN--YSIHDVVMPLPGFDVIYPKHKISEAYREMLAADNLDIDNMRHTIRDYSLS---G 571
Query: 394 NYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
YR++ +P WE++ Y D PL TD+D +
Sbjct: 572 AYRKIIIRPQSVSWEVVAYDDPKIPLFNTDVDNL 605
Score = 104 (41.7 bits), Expect = 6.5e-81, Sum P(3) = 6.5e-81
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
S+G+ ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 615 SEGRYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 655
Score = 40 (19.1 bits), Expect = 5.8e-17, Sum P(3) = 5.8e-17
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 300 ESSNDADDSSHLDEVPETDHPDGRHNLVKT-VTAADINSGKY 340
E + ++ L E E + P+ +++K +T D+ K+
Sbjct: 77 EEEEEEEEEDGLSEAGEEEEPESFADMMKHGLTELDVGITKF 118
>SGD|S000005769 [details] [associations]
symbol:PUS7 "Pseudouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0009982 "pseudouridine synthase
activity" evidence=IEA;IMP;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0031119 "tRNA pseudouridine synthesis"
evidence=IMP] [GO:0000455 "enzyme-directed rRNA pseudouridine
synthesis" evidence=IMP] [GO:0031120 "snRNA pseudouridine
synthesis" evidence=IDA;IMP] [GO:0009451 "RNA modification"
evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984
SGD:S000005769 GO:GO:0005634 EMBL:BK006948 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 GO:GO:0009982 SUPFAM:SSF55120
GO:GO:0031120 GO:GO:0031119 eggNOG:COG0585 KO:K06176
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554
HOGENOM:HOG000203484 OMA:HPLKLGE EMBL:Z75151 PIR:S67136
RefSeq:NP_014886.1 ProteinModelPortal:Q08647 DIP:DIP-6762N
IntAct:Q08647 MINT:MINT-617058 STRING:Q08647 PaxDb:Q08647
PeptideAtlas:Q08647 EnsemblFungi:YOR243C GeneID:854417
KEGG:sce:YOR243C CYGD:YOR243c OrthoDB:EOG4GJ2XJ NextBio:976619
Genevestigator:Q08647 GermOnline:YOR243C GO:GO:0000455
Uniprot:Q08647
Length = 676
Score = 710 (255.0 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 172/440 (39%), Positives = 253/440 (57%)
Query: 3 RNSKKRKERGDNPF-DSRGSENWPEQLGK-FLRFHLYKENKDTQEALGLISKMLGILPRS 60
RNS+ K+ N D+ G ENW K F+ F L+KENKDT EA+ +I+K+L + R
Sbjct: 189 RNSRTNKQEKINQTRDANGVENWGYGPSKDFIHFTLHKENKDTMEAVNVITKLLRVPSRV 248
Query: 61 FGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFT 120
+AGTKD+R+V+ QRV++ K +L ALN+ L G+ +G++ + L LG L GN F
Sbjct: 249 IRYAGTKDRRAVTCQRVSISKIGLDRLNALNRTLKGMIIGNYNFSDASLNLGDLKGNEFV 308
Query: 121 ITLRGVV-----VDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWK 175
+ +R V V E+++ SL NGFINYFG+QRFG+ S+ TH +G LL WK
Sbjct: 309 VVIRDVTTGNSEVSLEEIVSNGCKSLSENGFINYFGMQRFGTFSISTHTIGRELLLSNWK 368
Query: 176 SAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCL----KKCPG 231
A ++IL ++ + +AR+ + ET D L+++PR +AE A+L L K+ G
Sbjct: 369 KAAELILSDQDNVLPKSKEARKIWAETKDAALALKQMPRQCLAENALLYSLSNQRKEEDG 428
Query: 232 NYLQ-----ALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDT 286
Y + A+ IPR LR MYVH+YQS++WN AS R++ HG + +VVGDLV D +
Sbjct: 429 TYSENAYYTAIMKIPRNLRTMYVHAYQSYVWNSIASKRIELHGLK-LVVGDLVI---DTS 484
Query: 287 EKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVV 346
EK +P S D +D DE D + + K VT DI+S KYT++DVV
Sbjct: 485 EK-----SPLI---SGIDDED---FDE----DVREAQFIRAKAVTQEDIDSVKYTMEDVV 529
Query: 347 LPLPGSRVIYPMND-VAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDF 405
LP PG V+YP N+ + ++Y + + D ++ V++FS+ G+YR V QKP
Sbjct: 530 LPSPGFDVLYPSNEELKQLYVDILKADNMDPFNMRRKVRDFSLA---GSYRTVIQKPKSL 586
Query: 406 EWELLTYIDGNKPLAETDLD 425
E+ ++ Y D ++ L TDLD
Sbjct: 587 EYRIIHYDDPSQQLVNTDLD 606
Score = 79 (32.9 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 476 AKEVKQPHVESVCGA---DSQGKQMALKLGLTLPSSCYATMAIRELLKTSTS 524
AKE Q ++++ D G++ A+ L L +S YATMA+REL+K TS
Sbjct: 613 AKESGQKYMKAKLDRYMPDKGGEKTAVVLKFQLGTSAYATMALRELMKLETS 664
>POMBASE|SPBC1A4.09 [details] [associations]
symbol:SPBC1A4.09 "pseudouridine synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000455
"enzyme-directed rRNA pseudouridine synthesis" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0009982 "pseudouridine synthase activity"
evidence=ISO] [GO:0031119 "tRNA pseudouridine synthesis"
evidence=ISO] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=ISO] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984
PomBase:SPBC1A4.09 GO:GO:0005634 EMBL:CU329671 GO:GO:0003723
GO:GO:0009982 SUPFAM:SSF55120 GO:GO:0031120 GO:GO:0031119
eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326 TIGRFAMs:TIGR00094
HOGENOM:HOG000203484 OMA:HPLKLGE OrthoDB:EOG4GJ2XJ GO:GO:0000455
PIR:T39858 RefSeq:NP_595812.1 ProteinModelPortal:O74343
STRING:O74343 EnsemblFungi:SPBC1A4.09.1 GeneID:2540668
KEGG:spo:SPBC1A4.09 NextBio:20801792 Uniprot:O74343
Length = 680
Score = 628 (226.1 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 148/389 (38%), Positives = 222/389 (57%)
Query: 2 GRNSKKRKERGDNPFDSRGSE-NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRS 60
G + + R + P R +W G++ FHLYKEN+D+ + LG I+++L + R+
Sbjct: 210 GTFTVSKTTRKNQPRSRRDPRLSWKALGGEYCHFHLYKENRDSMDCLGKIARLLKVPTRT 269
Query: 61 FGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLI-----GIRLGDFCYVKEGLLLGQLL 115
AGTKD+R V+ QRV + RAS+LA LN + G LG++ Y L LG L
Sbjct: 270 LSIAGTKDRRGVTCQRVAIHHVRASRLAQLNSGSLKNSTYGFLLGNYSYKNSNLRLGDLK 329
Query: 116 GNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWK 175
GN F I +R V+ E V++A NSL +GFINYFGLQRFG+ SV TH +G LL+ +WK
Sbjct: 330 GNEFHIVVRNVITPKEKVVEA-LNSLKEHGFINYFGLQRFGTSSVGTHTIGVRLLQSDWK 388
Query: 176 SAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGN--- 232
AV +IL PR + +A + + T D + +LR LPR ++AE +IL+ + GN
Sbjct: 389 GAVDLILSPRPEHTGSVKEAIDLWHSTHDAEASLRILPRRMIAESSILETWSRS-GNQTD 447
Query: 233 YLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFC-KGDDTEKELG 291
YL A + IPR LR +Y H+YQS++WN AS R++ G + VVGDLV+ + + ++
Sbjct: 448 YLGAFQRIPRHLRSIYPHAYQSYVWNRVASWRIKNLG-DRPVVGDLVYSTESNGLSQKSP 506
Query: 292 CVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPG 351
V+PE A D L+++P + R + ++N+ ++I D+VLPLPG
Sbjct: 507 IVDPE--------APDL--LEDLPVSSKLSAR-----PIEEDEVNN--FSIYDIVLPLPG 549
Query: 352 SRVIYPMNDVAEVYHHL---AEKDGINLT 377
VIYP N+ ++Y + A D +N++
Sbjct: 550 RNVIYPKNETFDIYKSVMNEASLDPLNMS 578
Score = 137 (53.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 35/134 (26%), Positives = 68/134 (50%)
Query: 297 FEYESSNDADDSSHLD-EVPET--DHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSR 353
+ ES+ + S +D E P+ D P + + ++N+ ++I D+VLPLPG
Sbjct: 494 YSTESNGLSQKSPIVDPEAPDLLEDLPVSSKLSARPIEEDEVNN--FSIYDIVLPLPGRN 551
Query: 354 VIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYI 413
VIYP N+ ++Y + + ++ +E S+ G+YR++ +P + E+ + Y
Sbjct: 552 VIYPKNETFDIYKSVMNEASLDPLNMSRKDRELSLP---GDYRKLLVRPENMEFNFIKYD 608
Query: 414 DGNKPLAETDLDKI 427
+ + L TD D++
Sbjct: 609 NMEQQLILTDKDRL 622
Score = 91 (37.1 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 486 SVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTS 524
S+ + GK A+ L LPSS YATMA+RE L+T+T+
Sbjct: 626 SISVSSEVGKHTAVTLKFVLPSSAYATMALREALRTATA 664
>CGD|CAL0000869 [details] [associations]
symbol:PUS7 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] [GO:0031119 "tRNA pseudouridine synthesis"
evidence=IEA] [GO:0000455 "enzyme-directed rRNA pseudouridine
synthesis" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS50984 CGD:CAL0000869 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 EMBL:AACQ01000104
KO:K06176 PANTHER:PTHR13326 TIGRFAMs:TIGR00094 RefSeq:XP_714399.1
ProteinModelPortal:Q59XZ9 STRING:Q59XZ9 GeneID:3643960
KEGG:cal:CaO19.1753 Uniprot:Q59XZ9
Length = 759
Score = 476 (172.6 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 125/334 (37%), Positives = 187/334 (55%)
Query: 131 EDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERN 190
E ++ + SL +NGFINYFG+QRFGS S+ TH G +L W+ V+++L +E
Sbjct: 397 ESIVTSCFESLQKNGFINYFGMQRFGSFSISTHEFGKFILNENWQEFVELLLSDQESVAP 456
Query: 191 EISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLK-KCP------------GNYLQAL 237
+AR+ +K+T D TL KLP + VAE A+L+ L+ + P +YL+A+
Sbjct: 457 GSIEARKIWKQTRDPKLTLNKLPHYFVAETAVLRVLQNESPQQKDDNNTVYSSNSYLKAI 516
Query: 238 KAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEF 297
+AIP+ LRMMY H+YQ+++WN AS R++ +G +++ GDLVF +D NP+
Sbjct: 517 QAIPKNLRMMYGHAYQAYIWNLVASKRIELYGL-NLIEGDLVF---EDP-----ITNPDI 567
Query: 298 EYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYP 357
E D +L+E V+++T DI SGKYTI DV+LP PG ++ YP
Sbjct: 568 VDE------DVVYLNEAK-----------VRSLTKQDIESGKYTIFDVILPSPGYKIEYP 610
Query: 358 MNDVA-EVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYI--- 413
N + +VY + EKDG+N + + KEFS+T G YR++ K + +EL+ Y
Sbjct: 611 TNPILKQVYIDIMEKDGLNPYKMIRKQKEFSLT---GTYRKLMAKANNLSFELIKYKTEE 667
Query: 414 -------DGNKPLAETDLDKIAKAKLVNIVKEEE 440
DG KPL TDL+ L+N+ KE+E
Sbjct: 668 GEDGETGDGEKPLIRTDLE------LLNLKKEQE 695
Score = 181 (68.8 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 39/97 (40%), Positives = 56/97 (57%)
Query: 31 FLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAAL 90
+L F +YK+N+DT E I K+L I + +AGTKD+R + QR ++ + ++ AL
Sbjct: 279 YLHFTVYKQNRDTMEVANNIGKLLRINHKFINYAGTKDRRGATCQRFSINHGKVLRVNAL 338
Query: 91 NK-RLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGV 126
NK + G LG F Y L LG L GN FTI +R +
Sbjct: 339 NKSKRNGFTLGSFSYEDHPLKLGDLKGNEFTIVIRDI 375
Score = 70 (29.7 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 439 EEAVCGNKEKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQG-KQM 497
E+ G+ EK + +L K+ + + N E+ P + + D +G ++
Sbjct: 669 EDGETGDGEKPLIRTDLELLNLKKEQEKKSSQNSVTTPIEL--P--DRIINDDKEGGNKL 724
Query: 498 ALKLGLTLPSSCYATMAIRELLKTSTS 524
A+ L + L S YATMA+RE ++ TS
Sbjct: 725 AVVLRMQLGVSSYATMALREFMRIDTS 751
Score = 39 (18.8 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 111 LGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNG 145
L QL F L + SE+ K + +S RNG
Sbjct: 214 LHQLFRKVFQNKLE-TITSSENTFKIAISSRNRNG 247
>UNIPROTKB|Q96PZ0 [details] [associations]
symbol:PUS7 "Pseudouridylate synthase 7 homolog"
species:9606 "Homo sapiens" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984
GO:GO:0003723 GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 CTD:54517 HOGENOM:HOG000203484
HOVERGEN:HBG056990 OrthoDB:EOG4DR9BV EMBL:AC073138 EMBL:AC074013
EMBL:BC005209 EMBL:BC011396 EMBL:AB067484 EMBL:AK000492
IPI:IPI00044761 RefSeq:NP_061915.2 UniGene:Hs.520619
ProteinModelPortal:Q96PZ0 STRING:Q96PZ0 PhosphoSite:Q96PZ0
DMDM:37090412 PaxDb:Q96PZ0 PeptideAtlas:Q96PZ0 PRIDE:Q96PZ0
Ensembl:ENST00000356362 Ensembl:ENST00000469408
Ensembl:ENST00000544995 GeneID:54517 KEGG:hsa:54517 UCSC:uc003vcx.3
GeneCards:GC07M105080 HGNC:HGNC:26033 HPA:HPA024116
neXtProt:NX_Q96PZ0 PharmGKB:PA143485587 InParanoid:Q96PZ0
OMA:HPLKLGE PhylomeDB:Q96PZ0 GenomeRNAi:54517 NextBio:56908
ArrayExpress:Q96PZ0 Bgee:Q96PZ0 CleanEx:HS_PUS7
Genevestigator:Q96PZ0 GermOnline:ENSG00000091127 Uniprot:Q96PZ0
Length = 661
Score = 567 (204.7 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 143/396 (36%), Positives = 213/396 (53%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ ++SK L + P F + GTKDKR+++ Q + V K
Sbjct: 249 SWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKI 308
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +LA LNK L+ +LG+F Y K L LG+L GN FT+ LR + ++D ++ + NSL
Sbjct: 309 TAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNIT-GTDDQVQQAMNSLK 367
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
GFINY+G+QRFG+ +VPT+ VG +L+ W + +IL PR G E+ + K RE + +
Sbjct: 368 EIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAK 427
Query: 202 TDDIDGTLRKLPRHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
T D LRKLP E +L+ L K N + A IPR R+MY+HSYQS++WN+
Sbjct: 428 TKDPTAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNM 487
Query: 261 ASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEV-PETDH 319
S R++ +G + V GDLV T E VN Y + D + P+
Sbjct: 488 VSKRIEDYGLKPVP-GDLVLKGATATYIEEDDVN---NYSIHDVVMPLPGFDVIYPKHKI 543
Query: 320 PDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIY-PMNDVAEVYHHLAEKDGINLTE 378
+ ++ T DI++ ++ I D L ++I P N EV + K + T+
Sbjct: 544 QEAYREML-TADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTD 602
Query: 379 SLHNV--KEFSITSMTGNYRRVFQKPMDFEWELLTY 412
+ N+ K + + G YR + MDF TY
Sbjct: 603 -VDNLEGKTPPVFASEGKYRAL---KMDFSLPPSTY 634
Score = 184 (69.8 bits), Expect = 9.9e-17, Sum P(3) = 9.9e-17
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 334 DINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTG 393
D+N+ Y+I DVV+PLPG VIYP + + E Y + D +++ H ++++S++ G
Sbjct: 518 DVNN--YSIHDVVMPLPGFDVIYPKHKIQEAYREMLTADNLDIDNMRHKIRDYSLS---G 572
Query: 394 NYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
YR++ +P + WE++ Y D PL TD+D +
Sbjct: 573 AYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNL 606
Score = 107 (42.7 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
S+GK ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 616 SEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 656
Score = 37 (18.1 bits), Expect = 9.9e-17, Sum P(3) = 9.9e-17
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 291 GCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKT-VTAADINSGKY 340
G N E + E + ++ L E E + + +++K +T AD+ K+
Sbjct: 70 GGKNSEAQLEDEEEEEEDG-LSEECEEEESESFADMMKHGLTEADVGITKF 119
>FB|FBgn0035901 [details] [associations]
symbol:CG6745 species:7227 "Drosophila melanogaster"
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS50984 EMBL:AE014296 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585
KO:K06176 PANTHER:PTHR13326 TIGRFAMs:TIGR00094
GeneTree:ENSGT00530000063554 EMBL:AY069192 RefSeq:NP_648231.1
UniGene:Dm.893 SMR:Q9VSK9 IntAct:Q9VSK9 MINT:MINT-298015
STRING:Q9VSK9 EnsemblMetazoa:FBtr0076620 GeneID:38969
KEGG:dme:Dmel_CG6745 UCSC:CG6745-RA FlyBase:FBgn0035901
InParanoid:Q9VSK9 OMA:EAGISCF OrthoDB:EOG4NS1SH GenomeRNAi:38969
NextBio:811233 Uniprot:Q9VSK9
Length = 734
Score = 545 (196.9 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 130/433 (30%), Positives = 216/433 (49%)
Query: 15 PFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVST 74
P RG + W ++ F ++K N T + ++ L + P ++G KDKR+ +T
Sbjct: 222 PKPGRGDKRWSFP-ADYVTFLVHKTNLVTSDVASTLAARLNLRPSQVNYSGIKDKRAKTT 280
Query: 75 QRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVI 134
Q+ +V ++ + + + +G+F + L LG L GNRF I LR + + + I
Sbjct: 281 QKFSVKRRTPESILVAARSQRNVHIGNFGFESNTLKLGDLQGNRFRIALRHIAKEKREEI 340
Query: 135 KASANSLGRNGFINYFGLQRFG-SGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEIS 193
+ + SL GFINY+GLQRFG S SVPT+ VG LL+ ++K A ++IL PR+ + +
Sbjct: 341 EQALQSLKERGFINYYGLQRFGNSASVPTYEVGVALLKHDYKLACELILKPRDSDVEFLR 400
Query: 194 KAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSY 252
RE + + D ++ E+ +L L + +Y AL+ IPR + M+Y H+Y
Sbjct: 401 PIREEWWKNRDSAAAAAQIYGEKFIEKKLLDGLARFGESDYSSALRQIPRNMLMLYPHAY 460
Query: 253 QSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLD 312
QS ++N AS R+++ G + ++ GDLV+ + D +E E + + +
Sbjct: 461 QSLIFNRIASRRIKEFGLK-LIPGDLVYVEQDQSEASEEQAQQGEALEEQKEEEPNDEPL 519
Query: 313 EVPETDHPDGRHNL----VKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHL 368
EVPE D ++ V+ +TA DI SGKY + DVVLPLPG + YP N+ Y +
Sbjct: 520 EVPEGDEAIEEESIFKRKVRPLTAEDIASGKYKLCDVVLPLPGHDITYPSNECGAWYEEM 579
Query: 369 AEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIA 428
+ G++ + H K +++ G YR++ D +W Y L +D + +
Sbjct: 580 LAEVGLSSDQLKHKEKTYALA---GAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLK 636
Query: 429 KAKLVNIVKEEEA 441
+ E EA
Sbjct: 637 NIPVAPEPAEAEA 649
Score = 141 (54.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 49/188 (26%), Positives = 84/188 (44%)
Query: 327 VKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEF 386
V+ +TA DI SGKY + DVVLPLPG + YP N+ Y + + G++ + H K +
Sbjct: 538 VRPLTAEDIASGKYKLCDVVLPLPGHDITYPSNECGAWYEEMLAEVGLSSDQLKHKEKTY 597
Query: 387 SITSM-------TGNYR---RVFQKPMDF----EWELLTYIDGNKPLAETDLDKIAKAKL 432
++ + + + R++ P D +WELL I AE + + +A
Sbjct: 598 ALAGAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLKNIPVAPEPAEAEANYMALLLE 657
Query: 433 VNIVKEEEAVCGNKEKDPSDCMKQSESLSKDIKLSTENNE--AACAKEVKQPHVESVCGA 490
++ A +E D S++ + ++ E+NE A +E + V+ V
Sbjct: 658 FSLPTAAYATMFLRELLKQDTSSASQTQLEKQAMAKEDNEKKAVGTQEEQMEVVKEVADE 717
Query: 491 DSQGKQMA 498
D Q + A
Sbjct: 718 DGQETEQA 725
Score = 89 (36.4 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 490 ADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVA 526
A+++ MAL L +LP++ YATM +RELLK TS A
Sbjct: 645 AEAEANYMALLLEFSLPTAAYATMFLRELLKQDTSSA 681
>ASPGD|ASPL0000061146 [details] [associations]
symbol:AN0984 species:162425 "Emericella nidulans"
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR017091
InterPro:IPR020103 Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS50984
EMBL:BN001308 GO:GO:0003723 EMBL:AACD01000014 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176
PANTHER:PTHR13326 HOGENOM:HOG000203484 OrthoDB:EOG4GJ2XJ
RefSeq:XP_658588.1 ProteinModelPortal:Q5BEP6 STRING:Q5BEP6
EnsemblFungi:CADANIAT00001667 GeneID:2876759 KEGG:ani:AN0984.2
OMA:DIRKRYT Uniprot:Q5BEP6
Length = 745
Score = 351 (128.6 bits), Expect = 3.8e-60, Sum P(3) = 3.8e-60
Identities = 77/193 (39%), Positives = 111/193 (57%)
Query: 4 NSKKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGF 63
N K+ +G R NW E G++L F +YKENKDT E + I++ L + P+SF F
Sbjct: 216 NRNKKNPQGGGGGRERPRVNWDELGGQYLHFTIYKENKDTMEVISFIARQLKMNPKSFQF 275
Query: 64 AGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITL 123
AGTKD+R V+ QR ++ +A +LA LN+ L +GDF Y GL LG L GN F +TL
Sbjct: 276 AGTKDRRGVTVQRACAYRLQADRLAKLNRTLRNAVVGDFEYQPHGLELGDLYGNEFVVTL 335
Query: 124 R-----GV--------VVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLL 170
R G+ V +++++ S +L + G+ NY+GLQRFGS + T VG +L
Sbjct: 336 RECEVPGINIQDPASAVAKTKELVNTSLKNLYQRGYFNYYGLQRFGSFATRTDTVGVKIL 395
Query: 171 RGEWKSAVKMILD 183
+ ++K A ILD
Sbjct: 396 QDDFKGACDAILD 408
Score = 300 (110.7 bits), Expect = 3.8e-60, Sum P(3) = 3.8e-60
Identities = 83/272 (30%), Positives = 137/272 (50%)
Query: 167 ATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCL 226
A L +GE + A + + R + A ++ TD + L K+PR AE I++ L
Sbjct: 419 AELGQGEGEGATPTNISSEDKAR---ALAIHIFRTTDRVTDALEKMPRKFSAESNIIRHL 475
Query: 227 KKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFC-KGDD 285
+ +YL AL+ IPR LR+MYVH+YQS +WN A R + +G + VV GDLV + D
Sbjct: 476 GRSKNDYLGALQTIPRNLRLMYVHAYQSLVWNLAVGERWRLYG-DRVVEGDLVLIHEHRD 534
Query: 286 TEKELGCVNPEFEYESSNDA---DDSSHLDEVPETDHP-----DGRHNLVKTVTAADINS 337
+ P +S + D + VP+ +H + + +TAA+ NS
Sbjct: 535 KDGNSSYTTPAPGAGASGETTTIDADGEIIIVPQ-EHDSAFAVEDTFTRARALTAAEANS 593
Query: 338 GKYTIDDVVLPLPGSRVIYPMNDVAEVYHH-LAEKDGINLTESLHNVKEFSITSMTGNYR 396
G Y+I D+VLPLPG V+YP N + + Y + G L + + +++ S++G+YR
Sbjct: 594 GLYSIFDIVLPLPGFDVLYPPNKMTDFYKEFMGSSRGGGL-DPFNMRRKWKDASLSGSYR 652
Query: 397 RVFQKP-MDFEWELLTYIDGNKPLAETDLDKI 427
+V + D+ +++ Y + TDL+ +
Sbjct: 653 KVLSRMGRDYSVDVVLYSRDEEQFVRTDLENL 684
Score = 70 (29.7 bits), Expect = 3.8e-60, Sum P(3) = 3.8e-60
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLK 520
S+G ++A+ L L SS YATMA+REL++
Sbjct: 703 SEGDKLAVVLKFQLGSSQYATMALRELMR 731
>UNIPROTKB|F1SB38 [details] [associations]
symbol:PUS7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984
GO:GO:0003723 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554
OMA:HPLKLGE EMBL:CU570719 EMBL:CU914174 Ensembl:ENSSSCT00000016808
Uniprot:F1SB38
Length = 660
Score = 368 (134.6 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 93/263 (35%), Positives = 136/263 (51%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ L+SK L + P F + GTKDKR+++ Q + V K
Sbjct: 248 SWPKSRGSYCHFVLYKENKDTMDAINLLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKI 307
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +NK L I+ + K+ +L G + TI + +E ++ L
Sbjct: 308 LAHTHTHMNKCLTKIKNFNNKGQKKKKKKKELEGMQSTIKPSSSI-GTEKKVEEDVKKLK 366
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
I Y L RFG +L+ W + +IL PR G E+ + K RE + +
Sbjct: 367 CITLIKYIKLHRFGKIKFILMQNFRAILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAK 426
Query: 202 TDDIDGTLRKLPRHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLWNHA 260
T D LRKLP E +L+ L K N + A IPR R+MY+HSYQS++WN+
Sbjct: 427 TKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNM 486
Query: 261 ASARVQKHGTEHVVVGDLVFCKG 283
S R++++G + V GDLV KG
Sbjct: 487 VSKRIEEYGLKPVP-GDLVL-KG 507
Score = 185 (70.2 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 32/94 (34%), Positives = 58/94 (61%)
Query: 334 DINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTG 393
D+N+ Y+I DVV+PLPG +IYP + ++E Y + D +++ H ++++S++ G
Sbjct: 517 DVNN--YSIHDVVMPLPGFDIIYPKHKISEAYREMLTADNLDIDNMRHKIRDYSLS---G 571
Query: 394 NYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKI 427
YR++ +P + WE++ Y D PL TD+D +
Sbjct: 572 AYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNL 605
Score = 107 (42.7 bits), Expect = 4.2e-55, Sum P(3) = 4.2e-55
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
S+GK ALK+ +LP S YATMAIRE+LK TS+ LN
Sbjct: 615 SEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKKQTQLN 655
Score = 44 (20.5 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 282 KGDDTEKELGCVNPEFEYESSNDADDSSH 310
+G++ E+E C++ E E E+ + AD H
Sbjct: 79 EGEEEEEE-ECLSEESEEEAESFADMMKH 106
>UNIPROTKB|Q9H0K6 [details] [associations]
symbol:PUS7L "Pseudouridylate synthase 7 homolog-like
protein" species:9606 "Homo sapiens" [GO:0001522 "pseudouridine
synthesis" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR017091 InterPro:IPR020103
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984
GO:GO:0003723 GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 EMBL:AL136759 EMBL:CR627435 EMBL:BC020781
EMBL:BC033621 EMBL:BC068502 IPI:IPI00549239 RefSeq:NP_001092084.1
RefSeq:NP_001092085.1 RefSeq:NP_112582.3 UniGene:Hs.445814
ProteinModelPortal:Q9H0K6 SMR:Q9H0K6 STRING:Q9H0K6
PhosphoSite:Q9H0K6 DMDM:74733527 PaxDb:Q9H0K6 PRIDE:Q9H0K6
DNASU:83448 Ensembl:ENST00000344862 Ensembl:ENST00000416848
Ensembl:ENST00000551923 GeneID:83448 KEGG:hsa:83448 UCSC:uc001rnq.4
CTD:83448 GeneCards:GC12M044122 HGNC:HGNC:25276 neXtProt:NX_Q9H0K6
PharmGKB:PA143485588 eggNOG:COG0585 HOGENOM:HOG000115802
HOVERGEN:HBG060973 InParanoid:Q9H0K6 KO:K06176 OMA:QTEDAKG
OrthoDB:EOG4PNXGG PhylomeDB:Q9H0K6 GenomeRNAi:83448 NextBio:72352
ArrayExpress:Q9H0K6 Bgee:Q9H0K6 CleanEx:HS_PUS7L
Genevestigator:Q9H0K6 PANTHER:PTHR13326 TIGRFAMs:TIGR00094
Uniprot:Q9H0K6
Length = 701
Score = 422 (153.6 bits), Expect = 7.8e-54, Sum P(3) = 7.8e-54
Identities = 102/286 (35%), Positives = 163/286 (56%)
Query: 19 RGSENWPE-QLGK--FLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQ 75
RG E Q GK + F L KEN + EA+G ++ LG++P F +AG KDK++++ Q
Sbjct: 287 RGKRPLSECQEGKVIYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQ 346
Query: 76 RVTVFKQRASKLAALNKRLIGIRLGDFCY--VKEGLLLGQLLGNRFTITLRGV---VVDS 130
+ V K +L + K + R+ F V + L LGQL GN F I +R + + DS
Sbjct: 347 AMVVRKVTPERLKNIEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDS 406
Query: 131 EDV---IKASANSLGRNGFINYFGLQRFGSG-SVPTHLVGATLLRGEWKSAVKMILDPRE 186
++ I + ++ + GF+NY+G QRFG G V T +G LL+ E A+K+ L P +
Sbjct: 407 ANLRERIMEAIENVKKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPED 466
Query: 187 GERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKK---CPGNYLQALKAIPRT 243
+ + +++A++Y+ +T+D GTL +P V ERA+L+ L + +QA ++P +
Sbjct: 467 LD-DPVNRAKKYFLQTEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHS 525
Query: 244 LRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKE 289
+R+ YVH+Y S +WN A S R++ +G VV GDLV C +D + E
Sbjct: 526 MRIFYVHAYTSKIWNEAVSYRLETYGAR-VVQGDLV-CLDEDIDDE 569
Score = 122 (48.0 bits), Expect = 7.8e-54, Sum P(3) = 7.8e-54
Identities = 34/134 (25%), Positives = 68/134 (50%)
Query: 311 LDE-VPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLA 369
LDE + + + P+ + +LV T + ++ Y I VVLP+ G + YP N V + YH +
Sbjct: 562 LDEDIDDENFPNSKIHLV---TEEEGSANMYAIHQVVLPVLGYNIQYPKNKVGQWYHDIL 618
Query: 370 EKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAK 429
+DG+ V + ++ G YR++ + P + ++L+ D + + +D+ A
Sbjct: 619 SRDGLQTCR--FKVPTLKL-NIPGCYRQILKHPCNLSYQLMEDHDIDVKTKGSHIDETAL 675
Query: 430 AKLVNIVKEEEAVC 443
+ L++ + +A C
Sbjct: 676 SLLISF--DLDASC 687
Score = 58 (25.5 bits), Expect = 7.8e-54, Sum P(3) = 7.8e-54
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 497 MALKLGLTLPSSCYATMAIRELLK 520
++L + L +SCYAT+ ++E++K
Sbjct: 675 LSLLISFDLDASCYATVCLKEIMK 698
>UNIPROTKB|F1SGY7 [details] [associations]
symbol:PUS7L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS50984 GO:GO:0003723 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 CTD:83448 KO:K06176 OMA:QTEDAKG
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554
EMBL:FP102342 EMBL:CU633312 RefSeq:XP_001924942.3
Ensembl:ENSSSCT00000000867 GeneID:100155187 KEGG:ssc:100155187
Uniprot:F1SGY7
Length = 702
Score = 423 (154.0 bits), Expect = 3.3e-53, Sum P(3) = 3.3e-53
Identities = 104/284 (36%), Positives = 160/284 (56%)
Query: 19 RGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVT 78
R PE+ F L KEN + EA+G ++ LG++P F +AG KDK++++ Q +
Sbjct: 291 RSLRECPERKVIHTAFTLRKENLEMFEAVGFLAIKLGVIPSDFSYAGLKDKKAITYQAMV 350
Query: 79 VFKQRASKLAALNKRLIGIRLG--DFCYVKEGLLLGQLLGNRFTITLRGV---VVDS--- 130
V K +L + K L R+ + V + L LGQL GN F I +R + + DS
Sbjct: 351 VRKVTPERLKNIEKELEKKRMNILNIRSVDDSLRLGQLKGNHFDIVIRNLKNQINDSTSL 410
Query: 131 -EDVIKASANSLGRNGFINYFGLQRFGSG-SVPTHLVGATLLRGEWKSAVKMILDPREGE 188
E +++A N + GF+NY+G QRFG G V T +G LL+ E AVK+ L P + +
Sbjct: 411 RERILEAIEN-VKNKGFVNYYGPQRFGMGRKVHTDQIGLALLKSEMVKAVKLFLTPEDSD 469
Query: 189 RNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKK---CPGNYLQALKAIPRTLR 245
+ +++A++Y+ +TDD GTL +P V ERA+L+ L + +QA + P ++R
Sbjct: 470 -DPVNRAKKYFLQTDDAKGTLSLMPEFKVRERALLESLHRFGMTEEGCVQAWFSFPHSMR 528
Query: 246 MMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKE 289
+ YVH+Y S +WN AAS R+ +G+ VV GDLV C +D + E
Sbjct: 529 IFYVHAYSSKIWNEAASYRLATYGSR-VVEGDLV-CLEEDVDDE 570
Score = 112 (44.5 bits), Expect = 3.3e-53, Sum P(3) = 3.3e-53
Identities = 32/134 (23%), Positives = 65/134 (48%)
Query: 311 LDEVPETDH-PDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLA 369
L+E + +H P + +LV T D ++ Y I VVLP+ G + YP N V + Y +
Sbjct: 563 LEEDVDDEHLPSSKVHLV---TEEDESANTYAIHQVVLPVLGYNIQYPKNKVGQWYQEVL 619
Query: 370 EKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAK 429
+DG+ + + ++ G YR++ + P + ++L+ D + + +D+
Sbjct: 620 SRDGLQTCR--FKIPPLKL-NVPGCYRKILKHPHNLSYQLIEDADIDVKKDGSHIDEATL 676
Query: 430 AKLVNIVKEEEAVC 443
+ L++ + +A C
Sbjct: 677 SLLISF--DLDASC 688
Score = 61 (26.5 bits), Expect = 3.3e-53, Sum P(3) = 3.3e-53
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 497 MALKLGLTLPSSCYATMAIRELLK 520
++L + L +SCYAT+ +RE++K
Sbjct: 676 LSLLISFDLDASCYATVCLREIMK 699
>UNIPROTKB|B3KUJ1 [details] [associations]
symbol:PUS7L "Pseudouridylate synthase 7 homolog-like
protein" species:9606 "Homo sapiens" [GO:0001522 "pseudouridine
synthesis" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR020103
Pfam:PF01142 PROSITE:PS50984 GO:GO:0003723 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 EMBL:AC093012 UniGene:Hs.445814
GeneID:83448 HGNC:HGNC:25276 HOVERGEN:HBG060973 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 EMBL:AC016143 EMBL:AK097331 IPI:IPI00798013
RefSeq:NP_001258755.1 ProteinModelPortal:B3KUJ1 SMR:B3KUJ1
STRING:B3KUJ1 Ensembl:ENST00000431332 ArrayExpress:B3KUJ1
Bgee:B3KUJ1 Uniprot:B3KUJ1
Length = 388
Score = 399 (145.5 bits), Expect = 3.7e-53, Sum P(3) = 3.7e-53
Identities = 91/257 (35%), Positives = 150/257 (58%)
Query: 45 EALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCY 104
EA+G ++ LG++P F +AG KDK++++ Q + V K +L + K + R+ F
Sbjct: 3 EAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNVFNI 62
Query: 105 --VKEGLLLGQLLGNRFTITLRGV---VVDSEDV---IKASANSLGRNGFINYFGLQRFG 156
V + L LGQL GN F I +R + + DS ++ I + ++ + GF+NY+G QRFG
Sbjct: 63 RSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFG 122
Query: 157 SG-SVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRH 215
G V T +G LL+ E A+K+ L P + + + +++A++Y+ +T+D GTL +P
Sbjct: 123 KGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLD-DPVNRAKKYFLQTEDAKGTLSLMPEF 181
Query: 216 LVAERAILQCLKK---CPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEH 272
V ERA+L+ L + +QA ++P ++R+ YVH+Y S +WN A S R++ +G
Sbjct: 182 KVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWNEAVSYRLETYGAR- 240
Query: 273 VVVGDLVFCKGDDTEKE 289
VV GDLV C +D + E
Sbjct: 241 VVQGDLV-CLDEDIDDE 256
Score = 122 (48.0 bits), Expect = 3.7e-53, Sum P(3) = 3.7e-53
Identities = 34/134 (25%), Positives = 68/134 (50%)
Query: 311 LDE-VPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLA 369
LDE + + + P+ + +LV T + ++ Y I VVLP+ G + YP N V + YH +
Sbjct: 249 LDEDIDDENFPNSKIHLV---TEEEGSANMYAIHQVVLPVLGYNIQYPKNKVGQWYHDIL 305
Query: 370 EKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAK 429
+DG+ V + ++ G YR++ + P + ++L+ D + + +D+ A
Sbjct: 306 SRDGLQTCR--FKVPTLKL-NIPGCYRQILKHPCNLSYQLMEDHDIDVKTKGSHIDETAL 362
Query: 430 AKLVNIVKEEEAVC 443
+ L++ + +A C
Sbjct: 363 SLLISF--DLDASC 374
Score = 58 (25.5 bits), Expect = 3.7e-53, Sum P(3) = 3.7e-53
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 497 MALKLGLTLPSSCYATMAIRELLK 520
++L + L +SCYAT+ ++E++K
Sbjct: 362 LSLLISFDLDASCYATVCLKEIMK 385
>UNIPROTKB|E1BGT6 [details] [associations]
symbol:PUS7L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS50984 GO:GO:0003723 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 OMA:QTEDAKG PANTHER:PTHR13326
TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554 EMBL:DAAA02013043
IPI:IPI00999372 UniGene:Bt.9634 ProteinModelPortal:E1BGT6
Ensembl:ENSBTAT00000045587 NextBio:20867148 Uniprot:E1BGT6
Length = 702
Score = 424 (154.3 bits), Expect = 6.7e-53, Sum P(3) = 6.7e-53
Identities = 100/272 (36%), Positives = 158/272 (58%)
Query: 31 FLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAAL 90
+ F L KEN + EA+G ++ LG++P F +AG KDK++++ Q + V K +L +
Sbjct: 303 YTAFTLRKENLEMFEAVGFLAVKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNI 362
Query: 91 NKRLIGIRLGDFCY--VKEGLLLGQLLGNRFTITLRGV---VVDS----EDVIKASANSL 141
K + R+ F V++ L LGQL GN F I +R + + DS E +++A N +
Sbjct: 363 EKEVEKKRMNVFNIRSVEDSLRLGQLKGNHFDIVIRNLKNQINDSANLRERILEAIEN-V 421
Query: 142 GRNGFINYFGLQRFGSG-SVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYK 200
GF+NY+G QRFG G V T +G LL+ E AVK+ P + + + +++A++Y+
Sbjct: 422 KNKGFVNYYGPQRFGMGRKVHTDQIGLALLKSETVKAVKLFFTPEDLD-DPVNRAKKYFL 480
Query: 201 ETDDIDGTLRKLPRHLVAERAILQCLKK---CPGNYLQALKAIPRTLRMMYVHSYQSFLW 257
+T+D GTL +P V ERA+L+ L + Y+QA + P +LR+ YVH+Y S +W
Sbjct: 481 QTEDAKGTLALMPEFKVRERALLESLHRFGVTEEGYIQAWFSFPHSLRIFYVHAYSSKIW 540
Query: 258 NHAASARVQKHGTEHVVVGDLVFCKGDDTEKE 289
N A S R++ +G+ VV GDLV C +D + E
Sbjct: 541 NEAVSYRLETYGSR-VVEGDLV-CLDEDADNE 570
Score = 108 (43.1 bits), Expect = 6.7e-53, Sum P(3) = 6.7e-53
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 311 LDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAE 370
LDE + D+ + V VT + ++ Y I VVLP+ G + YP N V + Y +
Sbjct: 563 LDE--DADNEQLPSSKVHLVTEEEESANTYAIHQVVLPVLGCNIQYPKNKVGQWYQEVLS 620
Query: 371 KDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELL 410
+DG+ + + + ++ G YR++ + P + ++L+
Sbjct: 621 RDGLQTCK--FKIPTLKL-NVPGCYRKILKHPCNLSYQLM 657
Score = 61 (26.5 bits), Expect = 6.7e-53, Sum P(3) = 6.7e-53
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 497 MALKLGLTLPSSCYATMAIRELLK 520
++L + L +SCYAT+ +RE++K
Sbjct: 676 LSLLISFDLDASCYATVCLREIMK 699
>UNIPROTKB|F1P2N1 [details] [associations]
symbol:PUS7L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001522 "pseudouridine synthesis" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009982 "pseudouridine
synthase activity" evidence=IEA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR017091 InterPro:IPR020103
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS50984 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 OMA:QTEDAKG
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554
EMBL:AADN02010020 IPI:IPI00595997 Ensembl:ENSGALT00000015605
Uniprot:F1P2N1
Length = 579
Score = 409 (149.0 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 97/293 (33%), Positives = 163/293 (55%)
Query: 11 RGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKR 70
RG + R ++ + + + F L KEN +T EA+ ++ LG+LP F ++G KDK+
Sbjct: 161 RGRSCSRKRSADGFQIKQDLYTAFTLQKENLETLEAISFLAAELGVLPSDFSYSGVKDKK 220
Query: 71 SVSTQRVTVFKQRASKLAALNKRLI--GIRLGDFCYVKEGLLLGQLLGNRFTITLRGVV- 127
+++ Q + V K +L + +L G+R+ + ++ L LGQL GN F I +R +
Sbjct: 221 AITYQLMVVKKVTPERLKEIESKLEKKGMRIHNIHSAQQHLRLGQLRGNHFDIVVRDLKH 280
Query: 128 ------VDSEDVIKASANSLGRNGFINYFGLQRFGSG-SVPTHLVGATLLRGEWKSAVKM 180
VD ++ I + ++ GF+NY+G QRFG G +V T +G LL + AVK+
Sbjct: 281 HSHDSPVDLKERISEAMENIEAKGFVNYYGPQRFGQGQNVQTDQIGLALLNEKMVKAVKL 340
Query: 181 ILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALK-- 238
P + + + ++ A+ Y+ +T+D GTL LP V E+ +L+ L + N +K
Sbjct: 341 FFTPEDTD-DPVNNAKRYFLQTEDAKGTLTMLPEFKVREKMLLRALHRYGVNQEGCIKGW 399
Query: 239 -AIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKEL 290
+IP ++R+ YVH+Y S +WN A S R++ +G++ VV GDLVF + +D L
Sbjct: 400 LSIPHSVRIFYVHAYCSQIWNEATSYRLKTYGSK-VVEGDLVFSEENDESLSL 451
Score = 105 (42.0 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 27/117 (23%), Positives = 59/117 (50%)
Query: 316 ETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGIN 375
E D ++ V VTA + ++ KY++ VVLP+ G + YP N V + Y KD +
Sbjct: 444 ENDESLSLNDKVHVVTALEESASKYSMHQVVLPMVGHSIKYPSNKVGQWYRERLSKDELQ 503
Query: 376 LTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKAKL 432
+ + V + ++ G YR + + + + +++GN+ ++ + + + ++K+
Sbjct: 504 MCK--FRVPPLQL-NIPGCYRHILKNVQNLSY----FLEGNEEGSKIEDNHLNESKV 553
Score = 60 (26.2 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 496 QMALKLGLTLPSSCYATMAIRELLK 520
+++L + L SCYAT+ +RE++K
Sbjct: 552 KVSLHISFDLDPSCYATVCLREIMK 576
>MGI|MGI:1926145 [details] [associations]
symbol:Pus7l "pseudouridylate synthase 7 homolog (S.
cerevisiae)-like" species:10090 "Mus musculus" [GO:0001522
"pseudouridine synthesis" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0009451 "RNA
modification" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984 MGI:MGI:1926145
GO:GO:0003723 GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 CTD:83448 eggNOG:COG0585 HOGENOM:HOG000115802
HOVERGEN:HBG060973 KO:K06176 OMA:QTEDAKG OrthoDB:EOG4PNXGG
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 EMBL:AK029027 EMBL:AK040257
EMBL:BC066798 IPI:IPI00469441 RefSeq:NP_766025.1 UniGene:Mm.34344
ProteinModelPortal:Q8CE46 SMR:Q8CE46 PhosphoSite:Q8CE46
PRIDE:Q8CE46 Ensembl:ENSMUST00000049151 GeneID:78895 KEGG:mmu:78895
UCSC:uc007xjh.2 GeneTree:ENSGT00530000063554 InParanoid:Q8CE46
NextBio:349698 Bgee:Q8CE46 Genevestigator:Q8CE46 Uniprot:Q8CE46
Length = 702
Score = 434 (157.8 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 108/310 (34%), Positives = 173/310 (55%)
Query: 18 SRGSENWPE--QLGK--FLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVS 73
+RG + PE + GK + F L KEN +T EA+GL++ LG++P F +AG KDKR+++
Sbjct: 285 ARGKRSHPEGCERGKAVYTAFTLQKENLETFEAIGLLAVKLGVIPSDFSYAGLKDKRAIT 344
Query: 74 TQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEG--LLLGQLLGNRFTIT---LRGVVV 128
Q + V K +L ++ + + R+ F G L LGQL GN F I LR +
Sbjct: 345 YQSMVVKKVTPERLKSIKEEIEKKRMNVFNIRSVGDCLRLGQLKGNHFEIIIRHLRNQLN 404
Query: 129 DS----EDVIKASANSLGRNGFINYFGLQRFGSGS-VPTHLVGATLLRGEWKSAVKMILD 183
DS E +++A N + GF+NY+G QRFG G + T +G LL+ E A+K+ L
Sbjct: 405 DSANLTERILEAIEN-VKNKGFVNYYGPQRFGKGQKIQTDQIGLALLKNEMVKAIKLFLT 463
Query: 184 PREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKK---CPGNYLQALKAI 240
P + + + ++KA++Y+ T+D GTL +P V ERA+L+ L + ++A +
Sbjct: 464 PEDVD-DPVNKAKQYFLRTEDAKGTLSLMPEFRVRERALLESLHRFGVTEEGCVRAWFSF 522
Query: 241 PRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYE 300
P ++R+ Y+H+Y S +WN AAS R+ +G + VV GDL+ C +D +K P +
Sbjct: 523 PHSMRIFYIHAYSSRIWNEAASYRLAAYGPK-VVEGDLI-CSDEDADKHF----PSSKVH 576
Query: 301 SSNDADDSSH 310
++S+H
Sbjct: 577 LVTKEEESAH 586
Score = 87 (35.7 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 312 DEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEK 371
DE + P + +LV T + ++ Y + VVLP+ G V YP N V Y +
Sbjct: 563 DEDADKHFPSSKVHLV---TKEEESAHTYALHQVVLPVLGYNVQYPENQVGRWYQEALSR 619
Query: 372 DGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELL 410
DG+ V + ++ G YR + + P + L+
Sbjct: 620 DGLQACR--FRVPALKL-NVPGCYRHIVKHPRNVSHRLV 655
Score = 67 (28.6 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 489 GADSQGKQMALKLGLTLPSSCYATMAIRELLK 520
G S +L L L +SCYAT+ +RE++K
Sbjct: 668 GPHSDDTASSLSLSFDLDASCYATVCLREMMK 699
Score = 40 (19.1 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 413 IDGNKPLAETDLDKIAKAKLVNIV-KEEEA 441
++G+ ++ D DK + V++V KEEE+
Sbjct: 555 VEGDLICSDEDADKHFPSSKVHLVTKEEES 584
>UNIPROTKB|E2RCQ4 [details] [associations]
symbol:PUS7L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0001522
"pseudouridine synthesis" evidence=IEA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR017091 InterPro:IPR020103
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS50984 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 CTD:83448 KO:K06176
OMA:QTEDAKG PANTHER:PTHR13326 TIGRFAMs:TIGR00094
GeneTree:ENSGT00530000063554 EMBL:AAEX03015123 EMBL:AAEX03015124
RefSeq:XP_534832.3 ProteinModelPortal:E2RCQ4
Ensembl:ENSCAFT00000015442 GeneID:477637 KEGG:cfa:477637
NextBio:20853080 Uniprot:E2RCQ4
Length = 699
Score = 417 (151.9 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 106/297 (35%), Positives = 166/297 (55%)
Query: 6 KKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAG 65
KK K R + F+ + +Q + F L KEN + EALG ++ LG++P F +AG
Sbjct: 281 KKHKHRKRSLFECQ------DQKVIYTAFTLRKENLEMFEALGFLAIKLGVIPSDFSYAG 334
Query: 66 TKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCY--VKEGLLLGQLLGNRFTITL 123
KDK++++ Q + V K +L + K + R+ F V + L LGQL GN F I +
Sbjct: 335 LKDKKAITYQAMVVRKVSPERLKNIEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIII 394
Query: 124 RGV---VVDS----EDVIKASANSLGRNGFINYFGLQRFGSG-SVPTHLVGATLLRGEWK 175
R V + DS E +++A N + GF+NY+G QRFG G V T +G LL+ E
Sbjct: 395 RNVRNQINDSTNLRERILEAIEN-VKNKGFVNYYGPQRFGMGRKVHTDQIGLALLKSEMV 453
Query: 176 SAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKK---CPGN 232
AVK+ L P + + + +++A++Y+ +T+D GTL +P V ERA+L+ L +
Sbjct: 454 KAVKLFLTPEDLD-DPVNRAKKYFLQTEDAKGTLSLMPEFKVRERALLESLYRFGMTEEG 512
Query: 233 YLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKE 289
+QA + P ++R+ Y+H+Y S +WN A S R+ +G+ VV GDLV C +D + E
Sbjct: 513 CIQAWFSFPHSMRIFYIHAYSSKIWNEAVSYRLSTYGSR-VVEGDLV-CLDEDIDDE 567
Score = 105 (42.0 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 30/117 (25%), Positives = 56/117 (47%)
Query: 311 LDEVPETDH-PDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLA 369
LDE + +H P + +LV T + ++ Y I VVLP+ G + YP N V + Y
Sbjct: 560 LDEDIDDEHFPSSKVHLV---TEEEESASTYAIHQVVLPVLGYNIQYPKNKVGQWYQDTL 616
Query: 370 EKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDK 426
+DG+ V + ++ G YR++ + P + ++L+ D + + +D+
Sbjct: 617 SRDGLQTCR--FKVPTLKL-NVPGCYRQILKHPHNVSYQLMEEHDTDVKTEGSHIDE 670
Score = 64 (27.6 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 497 MALKLGLTLPSSCYATMAIRELLK 520
++L++ L +SCYAT+ +RE++K
Sbjct: 673 LSLQISFDLDASCYATVCLREIMK 696
>WB|WBGene00007101 [details] [associations]
symbol:B0024.11 species:6239 "Caenorhabditis elegans"
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0009451 "RNA modification"
evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS01268 PROSITE:PS50984
GO:GO:0003723 GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 EMBL:Z71178 eggNOG:COG0585 KO:K06176
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554
PIR:T18646 RefSeq:NP_505653.1 ProteinModelPortal:Q17426
IntAct:Q17426 MINT:MINT-226795 STRING:Q17426 PaxDb:Q17426
EnsemblMetazoa:B0024.11 GeneID:179436 KEGG:cel:CELE_B0024.11
UCSC:B0024.11 CTD:179436 WormBase:B0024.11 HOGENOM:HOG000076944
InParanoid:Q17426 OMA:GTRVHES NextBio:905382 Uniprot:Q17426
Length = 577
Score = 406 (148.0 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 98/260 (37%), Positives = 142/260 (54%)
Query: 18 SRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRV 77
SR + W E++ K F + KENK+T A LI+K L + P + G KDKR+V++QRV
Sbjct: 138 SRKRKLWDEKVPKECHFTICKENKETSFACQLIAKFLNVGPNNIRTHGIKDKRAVTSQRV 197
Query: 78 TVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKAS 137
+V K + LN +L GIR+ Y + + +G GNRF+I LR + DSE ++
Sbjct: 198 SVTKVHERTILDLNSKLRGIRVFGCEYKDDPVQMGAHWGNRFSIVLRSLPDDSEQLLHQR 257
Query: 138 ANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILD---PREGERNEISK 194
+ GFINYFG QRFGS S T +G +++ +W+ AVKMI+ P +
Sbjct: 258 LETFQNTGFINYFGTQRFGSRSSTTAEIGLAIVKRDWEKAVKMIMTNAMPDHLGYGSVGY 317
Query: 195 AREYYKETDDIDGTLRKLP---RHLVAERAILQCLKKCPGNYLQAL-KAIPRTLRMMYVH 250
A + + +T D KL E IL+CL K G + + +AIP R +YVH
Sbjct: 318 AAKCFSQTGDARKAFSKLKGAQAFATVEGNILKCLSK-GGTWQNCITEAIPIQSRSLYVH 376
Query: 251 SYQSFLWNHAASARVQKHGT 270
+YQS +WN AS RV+++GT
Sbjct: 377 AYQSLIWNKVASRRVKEYGT 396
Score = 64 (27.6 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 330 VTAADINSGKY-TIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKE-FS 387
V A + G++ T D+ +PLPG + + + A+ L E+DG+ + S +K+ FS
Sbjct: 403 VGANGFSLGEHATHYDIHIPLPGENLPFEGSYGAKWISELLEEDGLTQS-SFTALKDRFS 461
Query: 388 ITSMTGNYRRVFQKPMDFEWELLTYIDGN 416
+ + R +F + + +W+ + Y GN
Sbjct: 462 LGESS---RCLFVEAKELKWKFIRY--GN 485
Score = 60 (26.2 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 490 ADSQGKQMALKLGLTLPSSCYATMAIREL 518
A+ +G +AL++ +L S YAT+A+RE+
Sbjct: 502 AEQKGPLLALQIQFSLISGSYATVALREV 530
>UNIPROTKB|E7EUH7 [details] [associations]
symbol:PUS7 "Pseudouridylate synthase 7 homolog"
species:9606 "Homo sapiens" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 EMBL:AC073138 EMBL:AC074013 HGNC:HGNC:26033
IPI:IPI00945342 ProteinModelPortal:E7EUH7 Ensembl:ENST00000481939
ArrayExpress:E7EUH7 Bgee:E7EUH7 Uniprot:E7EUH7
Length = 448
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 86/192 (44%), Positives = 124/192 (64%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQ 82
+WP+ G + F LYKENKDT +A+ ++SK L + P F + GTKDKR+++ Q + V K
Sbjct: 249 SWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKI 308
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A +LA LNK L+ +LG+F Y K L LG+L GN FT+ LR + ++D ++ + NSL
Sbjct: 309 TAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNIT-GTDDQVQQAMNSLK 367
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKE 201
GFINY+G+QRFG+ +VPT+ VG +L+ W + +IL PR G E+ + K RE + +
Sbjct: 368 EIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAK 427
Query: 202 TDDIDGTLRKLP 213
T D LRKLP
Sbjct: 428 TKDPTAALRKLP 439
>UNIPROTKB|I3LL64 [details] [associations]
symbol:PUS7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 Pfam:PF01142 PROSITE:PS50984 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 PANTHER:PTHR13326
GeneTree:ENSGT00530000063554 Ensembl:ENSSSCT00000028990
Uniprot:I3LL64
Length = 202
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 81/191 (42%), Positives = 119/191 (62%)
Query: 95 IGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQR 154
+ +LG+F Y K+ L LG+L GN FT+ LR + ++D ++ + NSL GFINY+G+QR
Sbjct: 1 MNFKLGNFSYQKKPLKLGELQGNHFTVVLRKIT-GTDDQVQQAMNSLKEIGFINYYGMQR 59
Query: 155 FGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNEISKAREYYKETDDIDGTLRKLP 213
FG+ +VPT+ VG +L+ W + +IL PR G E+ + K RE + +T D LRKLP
Sbjct: 60 FGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAKTKDPAAALRKLP 119
Query: 214 RHLVAERAILQCLKKCP-GNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEH 272
E +L+ L K N + A IPR R+MY+HSYQS++WN+ S R++++G +
Sbjct: 120 VKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEEYGLKP 179
Query: 273 VVVGDLVFCKG 283
V GDLV KG
Sbjct: 180 VP-GDLVL-KG 188
>UNIPROTKB|P60347 [details] [associations]
symbol:truD "tRNA pseudouridine synthase D" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01082
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR020103
InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984
GO:GO:0003723 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008033
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585
KO:K06176 PANTHER:PTHR13326 TIGRFAMs:TIGR00094 HOGENOM:HOG000224848
RefSeq:NP_951578.1 ProteinModelPortal:P60347 GeneID:2686060
KEGG:gsu:GSU0520 PATRIC:22023795 OMA:WAGTKDK ProtClustDB:CLSK827897
BioCyc:GSUL243231:GH27-480-MONOMER Uniprot:P60347
Length = 408
Score = 320 (117.7 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 85/250 (34%), Positives = 135/250 (54%)
Query: 38 KENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGI 97
K T EA+ + + G R G+AG KD R ++ Q V++ + +++ LN + GI
Sbjct: 52 KRGITTLEAIRRLCRATGAPERDTGYAGMKDARGITRQTVSLPRVTPAEVMGLN--IPGI 109
Query: 98 RLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFG- 156
R+ + L LG L GNRF + LR V D+ D +A + L R G N FG QR+G
Sbjct: 110 RILSADRHRNKLRLGHLAGNRFRLRLRETVPDAADRARAILDVLARRGVPNRFGEQRYGI 169
Query: 157 SGSVPTHLVGATLLRGEWKSAVKMIL-DPREGERNEISKAREYYKETDDIDGTLRKLPRH 215
G+ +HLVG +L G+W+ AV +++ DP + E A E Y++ D+ G+L P H
Sbjct: 170 QGN--SHLVGRAMLAGDWRGAVDLLMGDPAKVEGERWRAAIEAYRQ-GDLAGSLSLFPGH 226
Query: 216 LVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVV 275
ER +LQ L K P ++ +A+ + L+ +Y+ + QS L++ R+Q +HV+
Sbjct: 227 CRTERDVLQRLAKRPDDFERAVHGVHPRLKKLYLSACQSALFDRVLETRLQT--IDHVME 284
Query: 276 GDLVFCKGDD 285
GDL + K D+
Sbjct: 285 GDLAW-KHDN 293
Score = 50 (22.7 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 489 GADSQGKQMALKLGLTLPSSCYATMAIRELLK 520
G + ++ L L +LP YAT +RE++K
Sbjct: 371 GPELSCEEEDLVLRFSLPRGSYATAVLREVMK 402
>TIGR_CMR|GSU_0520 [details] [associations]
symbol:GSU_0520 "conserved hypothetical protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01082 InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268
PROSITE:PS50984 GO:GO:0003723 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 HOGENOM:HOG000224848 RefSeq:NP_951578.1
ProteinModelPortal:P60347 GeneID:2686060 KEGG:gsu:GSU0520
PATRIC:22023795 OMA:WAGTKDK ProtClustDB:CLSK827897
BioCyc:GSUL243231:GH27-480-MONOMER Uniprot:P60347
Length = 408
Score = 320 (117.7 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 85/250 (34%), Positives = 135/250 (54%)
Query: 38 KENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGI 97
K T EA+ + + G R G+AG KD R ++ Q V++ + +++ LN + GI
Sbjct: 52 KRGITTLEAIRRLCRATGAPERDTGYAGMKDARGITRQTVSLPRVTPAEVMGLN--IPGI 109
Query: 98 RLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFG- 156
R+ + L LG L GNRF + LR V D+ D +A + L R G N FG QR+G
Sbjct: 110 RILSADRHRNKLRLGHLAGNRFRLRLRETVPDAADRARAILDVLARRGVPNRFGEQRYGI 169
Query: 157 SGSVPTHLVGATLLRGEWKSAVKMIL-DPREGERNEISKAREYYKETDDIDGTLRKLPRH 215
G+ +HLVG +L G+W+ AV +++ DP + E A E Y++ D+ G+L P H
Sbjct: 170 QGN--SHLVGRAMLAGDWRGAVDLLMGDPAKVEGERWRAAIEAYRQ-GDLAGSLSLFPGH 226
Query: 216 LVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVV 275
ER +LQ L K P ++ +A+ + L+ +Y+ + QS L++ R+Q +HV+
Sbjct: 227 CRTERDVLQRLAKRPDDFERAVHGVHPRLKKLYLSACQSALFDRVLETRLQT--IDHVME 284
Query: 276 GDLVFCKGDD 285
GDL + K D+
Sbjct: 285 GDLAW-KHDN 293
Score = 50 (22.7 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 489 GADSQGKQMALKLGLTLPSSCYATMAIRELLK 520
G + ++ L L +LP YAT +RE++K
Sbjct: 371 GPELSCEEEDLVLRFSLPRGSYATAVLREVMK 402
>GENEDB_PFALCIPARUM|PF10_0341 [details] [associations]
symbol:PF10_0341 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984 GO:GO:0003723
EMBL:AE014185 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 KO:K06176
PANTHER:PTHR13326 RefSeq:XP_001347625.1 ProteinModelPortal:Q8IJ59
EnsemblProtists:PF10_0341:mRNA GeneID:810498 KEGG:pfa:PF10_0341
EuPathDB:PlasmoDB:PF3D7_1035000 HOGENOM:HOG000284532 Uniprot:Q8IJ59
Length = 993
Score = 222 (83.2 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 89/342 (26%), Positives = 154/342 (45%)
Query: 185 REGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTL 244
++ ++ +ISK +I + + H E+ IL +K N A +P+ +
Sbjct: 683 KKKKKIDISKENHNISVPQEIINIINSISNHSYVEKTILNSIKNS-NNLKNAFMNLPKDI 741
Query: 245 RMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSND 304
+++H+ QS ++N S R++K G + + +GDLV E+ E + +
Sbjct: 742 FSLFIHAIQSIVFNLLVSIRMKKFGLQ-IALGDLV---------EIY----EQHHSGYSS 787
Query: 305 ADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSR-VIYPMNDVAE 363
D+SS D + + D K + + N Y I DVVLPLPG + ++ P N + E
Sbjct: 788 LDESSD-DNTSDNTNNDNMLYESKIIPITENNISLYNIYDVVLPLPGDKNIVLPPN-LKE 845
Query: 364 VYHHLAEKDGINLT-ESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLT--YIDGNK-PL 419
Y + E INLT E + K F S G YR++ KP +F+ + D NK P+
Sbjct: 846 EYIKVLET--INLTLEDFKSEKHFFNAS--GCYRKIVVKPYNFKSIFIKNELNDLNKIPI 901
Query: 420 AETDLDKIAKAKLVNIVKEEEAVCGNKEKDPSDCMKQSESLSKD-IKLSTENNEAACAKE 478
++DL K+ N +E + + S + + +++ + I +S E KE
Sbjct: 902 IKSDLYKLKNEDKENNTFIKEQLPNKTNQASSQIITEQQNVEDELIYVSNEQYHEYLIKE 961
Query: 479 VKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLK 520
+ P ++ ++ L +LP S Y T+A+ ELLK
Sbjct: 962 I--PDYQTTS---------SIYLTCSLPKSSYITVALMELLK 992
Score = 208 (78.3 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 51/182 (28%), Positives = 87/182 (47%)
Query: 30 KFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAA 89
K+L F+LYKENKD E L L + G KDKR+++ Q+ + K +
Sbjct: 443 KYLHFNLYKENKDICEILNKFKMNLSKKNTDISYCGIKDKRAITVQKFCIHKTNKYDIYN 502
Query: 90 L-----NKRLIG--IRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
L NK + + + Y ++ L LG L GN F + +RGV + + + +L
Sbjct: 503 LISNNNNKWFCNNNVYISNLEYKRKKLSLGNLNGNHFKVIIRGVHNNVKSNFHILSENLR 562
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKET 202
GF+NY+G QRFG+ + + +G ++L+ +K ++ ++ E + + Y E
Sbjct: 563 TKGFVNYYGHQRFGTKQIKNYEIGISILKRNYKHSLSYVIQNTELKDEDKQNLITYINEL 622
Query: 203 DD 204
D
Sbjct: 623 TD 624
>UNIPROTKB|Q8IJ59 [details] [associations]
symbol:PF10_0341 "tRNA pseudouridine synthase D, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984 GO:GO:0003723
EMBL:AE014185 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 KO:K06176
PANTHER:PTHR13326 RefSeq:XP_001347625.1 ProteinModelPortal:Q8IJ59
EnsemblProtists:PF10_0341:mRNA GeneID:810498 KEGG:pfa:PF10_0341
EuPathDB:PlasmoDB:PF3D7_1035000 HOGENOM:HOG000284532 Uniprot:Q8IJ59
Length = 993
Score = 222 (83.2 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 89/342 (26%), Positives = 154/342 (45%)
Query: 185 REGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTL 244
++ ++ +ISK +I + + H E+ IL +K N A +P+ +
Sbjct: 683 KKKKKIDISKENHNISVPQEIINIINSISNHSYVEKTILNSIKNS-NNLKNAFMNLPKDI 741
Query: 245 RMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSND 304
+++H+ QS ++N S R++K G + + +GDLV E+ E + +
Sbjct: 742 FSLFIHAIQSIVFNLLVSIRMKKFGLQ-IALGDLV---------EIY----EQHHSGYSS 787
Query: 305 ADDSSHLDEVPETDHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSR-VIYPMNDVAE 363
D+SS D + + D K + + N Y I DVVLPLPG + ++ P N + E
Sbjct: 788 LDESSD-DNTSDNTNNDNMLYESKIIPITENNISLYNIYDVVLPLPGDKNIVLPPN-LKE 845
Query: 364 VYHHLAEKDGINLT-ESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLT--YIDGNK-PL 419
Y + E INLT E + K F S G YR++ KP +F+ + D NK P+
Sbjct: 846 EYIKVLET--INLTLEDFKSEKHFFNAS--GCYRKIVVKPYNFKSIFIKNELNDLNKIPI 901
Query: 420 AETDLDKIAKAKLVNIVKEEEAVCGNKEKDPSDCMKQSESLSKD-IKLSTENNEAACAKE 478
++DL K+ N +E + + S + + +++ + I +S E KE
Sbjct: 902 IKSDLYKLKNEDKENNTFIKEQLPNKTNQASSQIITEQQNVEDELIYVSNEQYHEYLIKE 961
Query: 479 VKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLK 520
+ P ++ ++ L +LP S Y T+A+ ELLK
Sbjct: 962 I--PDYQTTS---------SIYLTCSLPKSSYITVALMELLK 992
Score = 208 (78.3 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 51/182 (28%), Positives = 87/182 (47%)
Query: 30 KFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAA 89
K+L F+LYKENKD E L L + G KDKR+++ Q+ + K +
Sbjct: 443 KYLHFNLYKENKDICEILNKFKMNLSKKNTDISYCGIKDKRAITVQKFCIHKTNKYDIYN 502
Query: 90 L-----NKRLIG--IRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
L NK + + + Y ++ L LG L GN F + +RGV + + + +L
Sbjct: 503 LISNNNNKWFCNNNVYISNLEYKRKKLSLGNLNGNHFKVIIRGVHNNVKSNFHILSENLR 562
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKET 202
GF+NY+G QRFG+ + + +G ++L+ +K ++ ++ E + + Y E
Sbjct: 563 TKGFVNYYGHQRFGTKQIKNYEIGISILKRNYKHSLSYVIQNTELKDEDKQNLITYINEL 622
Query: 203 DD 204
D
Sbjct: 623 TD 624
>UNIPROTKB|D4ABN2 [details] [associations]
symbol:Pus7l "Protein Pus7l" species:10116 "Rattus
norvegicus" [GO:0001522 "pseudouridine synthesis" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009982 "pseudouridine
synthase activity" evidence=IEA] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR017091 InterPro:IPR020103
Pfam:PF01142 PIRSF:PIRSF037016 PROSITE:PS50984 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 OrthoDB:EOG4PNXGG
PANTHER:PTHR13326 GeneTree:ENSGT00530000063554 IPI:IPI00959017
Ensembl:ENSRNOT00000029097 Uniprot:D4ABN2
Length = 577
Score = 355 (130.0 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 92/271 (33%), Positives = 150/271 (55%)
Query: 31 FLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAAL 90
+ F L KEN + EA+G ++ LG++P F +AG KDK++++ Q + V K +L +
Sbjct: 311 YTAFTLQKENLEMFEAIGFLAIQLGVIPSDFSYAGLKDKKAITYQSMVVRKVTPERLKTI 370
Query: 91 NKRLIGIRLGDFCY--VKEGLLLGQLLGNRFTITLRGV---VVDS----EDVIKASANSL 141
+ + R+ F V + L LGQL GN F I +R + DS E V++A N
Sbjct: 371 EEEIKKKRMNVFNVRSVDDSLRLGQLKGNHFEIIIRNLRNQPNDSANLRERVLEAIENVK 430
Query: 142 GRNGFINYFGLQRFGSGS-VPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYK 200
R F++YFG++ G+G H R K A+K+ L P + + + ++KA++Y+
Sbjct: 431 TRX-FLSYFGIKSEGNGRCTQIHKTNNKEKRMTVK-AIKLFLTPEDAD-DPVNKAKKYFL 487
Query: 201 ETDDIDGTLRKLPRHLVAERAILQCLKK---CPGNYLQALKAIPRTLRMMYVHSYQSFLW 257
+T+D GTL +P V ERA+L+ L + +QA + P ++R+ Y+H+Y S +W
Sbjct: 488 QTEDAKGTLSLMPEFRVRERALLESLHRFGVTEEGCVQAWFSFPHSMRIFYIHAYSSRIW 547
Query: 258 NHAASARVQKHGTEHVVVGDLVFCKGDDTEK 288
N AAS R+ +G + VV GDLV C +D ++
Sbjct: 548 NEAASYRLAAYGPK-VVKGDLV-CLDEDADE 576
>ZFIN|ZDB-GENE-050419-188 [details] [associations]
symbol:pus7l "pseudouridylate synthase 7 homolog
(S. cerevisiae)-like" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0009451 "RNA modification" evidence=IEA]
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR017091 InterPro:IPR020103 Pfam:PF01142
PIRSF:PIRSF037016 PROSITE:PS50984 ZFIN:ZDB-GENE-050419-188
GO:GO:0003723 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 GeneTree:ENSGT00530000063554
EMBL:CR786571 IPI:IPI00971664 Ensembl:ENSDART00000101812
Bgee:E9QFR2 Uniprot:E9QFR2
Length = 657
Score = 235 (87.8 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 61/204 (29%), Positives = 105/204 (51%)
Query: 9 KERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKD 68
+ERG ++ ++ + F L KEN +T EA+ ++ +LG+LP F +AG KD
Sbjct: 225 RERGKQAKKRTMADCQMQEESLYTAFTLRKENLETLEAISYMAAVLGVLPSDFTYAGIKD 284
Query: 69 KRSVSTQRVTVFKQRASKLAALNKRLI--GIRLGDFCYVKEGLLLGQLLGNRFTITLRGV 126
KR+++ Q + V K +L G+ + E L LG+L GN F + +R +
Sbjct: 285 KRAITYQAMVVKKISPERLLEKGSEFERRGMEISRVRPAFEALKLGRLQGNHFELVIRDL 344
Query: 127 -------VVDSEDVIKASANSLGRNGFINYFGLQRFGSGS-VPTHLVGATLLRGEWKSAV 178
+ + VI+ + ++ GF+NY+G QRFGSGS V VG LL+ +++V
Sbjct: 345 KHHGKHGLAELPKVIEEAVENVKNKGFVNYYGPQRFGSGSCVQADQVGLALLKENMEASV 404
Query: 179 KMILDPREGERNEISKAREYYKET 202
K+ P + + + +KA+ ++ T
Sbjct: 405 KLFFTPEDDDDLQ-NKAKRHFLHT 427
Score = 118 (46.6 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 45/171 (26%), Positives = 82/171 (47%)
Query: 165 VGATLLRGEWKSAVKMILDPREGERNEISKAREY------YKETDDID---GTLRK---- 211
VG LL+ +++VK+ P + + + R + + T + G ++
Sbjct: 391 VGLALLKENMEASVKLFFTPEDDDDLQNKAKRHFLHTVSVHPRTTNCSLRSGNAKESLVL 450
Query: 212 LPRHLVAERAILQCLKKCPGNYLQALK---AIPRTLRMMYVHSYQSFLWNHAASARVQKH 268
+P + ER +L+ L + + ++P ++R+ Y+HSY S +WN AA R+QK
Sbjct: 451 MPAYKARERLMLRALHRYGSGQEGCTRGWLSLPHSMRVFYLHSYCSRVWNQAAKYRLQKL 510
Query: 269 GTEHVVVGDLVFC---KG-DDTEKELGCVNPEFEYESSNDA-DDSSHLDEV 314
G + V GDLV+ KG D +EL P+ +S++ ++ LD+V
Sbjct: 511 GFKPVQ-GDLVWAEPVKGLKDATEELSA--PQIHVVTSDEEKNEVFSLDQV 558
Score = 99 (39.9 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 25/86 (29%), Positives = 45/86 (52%)
Query: 327 VKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLH-NVKE 385
+ VT+ + + +++D V+LP+PG+ V YP N + + Y +DG+ ES V
Sbjct: 540 IHVVTSDEEKNEVFSLDQVILPMPGNSVKYPENLLGQWYQDRLAQDGL---ESCRFRVTP 596
Query: 386 FSITSMTGNYRRVFQKPMDFEWELLT 411
+ ++ G YR + KP + + L T
Sbjct: 597 LKL-NVPGCYRPLLAKPQNITYSLQT 621
Score = 65 (27.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 26/104 (25%), Positives = 42/104 (40%)
Query: 424 LDKIAKAKLVNIVKEEEAVCGNKEKD--PSDCMKQSESLSKDIKLSTEN-NEAACAKEVK 480
LD++ N VK E + G +D D ++ +KL+ AK
Sbjct: 555 LDQVILPMPGNSVKYPENLLGQWYQDRLAQDGLESCRFRVTPLKLNVPGCYRPLLAKPQN 614
Query: 481 QPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTS 524
+ +D L L L +SCYAT+ + E++KT+ S
Sbjct: 615 ITYSLQTSSSDESNTH-CLSLNFDLEASCYATVCLGEIMKTNLS 657
>UNIPROTKB|F8VP66 [details] [associations]
symbol:PUS7L "Pseudouridylate synthase 7 homolog-like
protein" species:9606 "Homo sapiens" [GO:0001522 "pseudouridine
synthesis" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR020103
Pfam:PF01142 PROSITE:PS50984 GO:GO:0003723 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 EMBL:AC093012 HGNC:HGNC:25276
PANTHER:PTHR13326 EMBL:AC016143 IPI:IPI01021106
ProteinModelPortal:F8VP66 SMR:F8VP66 Ensembl:ENST00000547156
ArrayExpress:F8VP66 Bgee:F8VP66 Uniprot:F8VP66
Length = 154
Score = 228 (85.3 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 53/151 (35%), Positives = 85/151 (56%)
Query: 45 EALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCY 104
EA+G ++ LG++P F +AG KDK++++ Q + V K +L + K + R+ F
Sbjct: 3 EAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNVFNI 62
Query: 105 --VKEGLLLGQLLGNRFTITLRGV---VVDSEDV---IKASANSLGRNGFINYFGLQRFG 156
V + L LGQL GN F I +R + + DS ++ I + ++ + GF+NY+G QRFG
Sbjct: 63 RSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFG 122
Query: 157 SG-SVPTHLVGATLLRGEWKSAVKMILDPRE 186
G V T +G LL+ E A+K+ L P +
Sbjct: 123 KGRKVHTDQIGLALLKNEMMKAIKLFLTPED 153
>UNIPROTKB|F8VW99 [details] [associations]
symbol:PUS7L "Pseudouridylate synthase 7 homolog-like
protein" species:9606 "Homo sapiens" [GO:0001522 "pseudouridine
synthesis" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR020103
Pfam:PF01142 PROSITE:PS50984 GO:GO:0003723 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 EMBL:AC093012 HGNC:HGNC:25276
PANTHER:PTHR13326 EMBL:AC016143 IPI:IPI01022649
ProteinModelPortal:F8VW99 SMR:F8VW99 Ensembl:ENST00000550784
ArrayExpress:F8VW99 Bgee:F8VW99 Uniprot:F8VW99
Length = 161
Score = 228 (85.3 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 53/151 (35%), Positives = 85/151 (56%)
Query: 45 EALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCY 104
EA+G ++ LG++P F +AG KDK++++ Q + V K +L + K + R+ F
Sbjct: 3 EAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNVFNI 62
Query: 105 --VKEGLLLGQLLGNRFTITLRGV---VVDSEDV---IKASANSLGRNGFINYFGLQRFG 156
V + L LGQL GN F I +R + + DS ++ I + ++ + GF+NY+G QRFG
Sbjct: 63 RSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFG 122
Query: 157 SG-SVPTHLVGATLLRGEWKSAVKMILDPRE 186
G V T +G LL+ E A+K+ L P +
Sbjct: 123 KGRKVHTDQIGLALLKNEMMKAIKLFLTPED 153
>TIGR_CMR|CHY_1627 [details] [associations]
symbol:CHY_1627 "tRNA pseudouridine synthase D family
protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006400 "tRNA modification" evidence=ISS] [GO:0009982
"pseudouridine synthase activity" evidence=ISS] InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR020103 Pfam:PF01142 PROSITE:PS50984
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176
PANTHER:PTHR13326 RefSeq:YP_360450.1 ProteinModelPortal:Q3ABN4
STRING:Q3ABN4 GeneID:3728298 KEGG:chy:CHY_1627 PATRIC:21276377
HOGENOM:HOG000254431 OMA:AYQSYLW ProtClustDB:CLSK842121
BioCyc:CHYD246194:GJCN-1626-MONOMER Uniprot:Q3ABN4
Length = 387
Score = 198 (74.8 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 70/244 (28%), Positives = 111/244 (45%)
Query: 29 GKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLA 88
G F + L K +T +AL I+ G+ G+ G KD+ + Q +TV RA+K
Sbjct: 24 GDFKVYLLEKRYWNTLDALQRIAAENGLRLSEIGYGGRKDRYGHTFQYITV---RATK-- 78
Query: 89 ALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVV-VDSEDVIKASANSLGRNGFI 147
L R ++L Y+ + + GN F ITLR + + D+IK N + + GF
Sbjct: 79 NLTTREKNLKLTLMGYLNLPMSPELIAGNHFEITLRALSGEEGRDLIKRGEN-VKKYGFP 137
Query: 148 NYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDG 207
NYF QRFGS LL G A+K+ L E ++ +K R+ + + +
Sbjct: 138 NYFDDQRFGSYDKEQGFFAKKLLLGHLNGALKIYLTSIYPEESKEAKERKRFFMANWGNW 197
Query: 208 TLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQK 267
++ ER I L+K P N+ A+ IP+ +Y +YQ +L+N+ +
Sbjct: 198 SVCLEASKTRVEREIFSLLEKEPKNFAGAINLIPKEQLSLYFAAYQGYLYNNLLKEVLLN 257
Query: 268 HGTE 271
G E
Sbjct: 258 QGIE 261
Score = 49 (22.3 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 494 GKQMALKLGLTLPSSCYATMAIREL 518
GKQ L+L LP YATM I+ L
Sbjct: 360 GKQK-LQLKFFLPRGSYATMLIKAL 383
Score = 49 (22.3 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 342 IDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGI 374
+ ++LP +V +P +V Y + E++G+
Sbjct: 286 LKSLMLPTAAQKVPFPNEEVRREYFKILEREGL 318
>TIGR_CMR|CJE_1631 [details] [associations]
symbol:CJE_1631 "tRNA pseudouridine synthase D, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01082 InterPro:IPR001656
InterPro:IPR011760 InterPro:IPR020103 InterPro:IPR020119
Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984 GO:GO:0003723
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0008033 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176
PANTHER:PTHR13326 TIGRFAMs:TIGR00094 RefSeq:YP_179612.1
ProteinModelPortal:Q5HSX3 STRING:Q5HSX3 GeneID:3232259
KEGG:cjr:CJE1631 PATRIC:20045057 HOGENOM:HOG000224848 OMA:EVPLYEF
ProtClustDB:PRK00984 BioCyc:CJEJ195099:GJC0-1661-MONOMER
Uniprot:Q5HSX3
Length = 372
Score = 192 (72.6 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 52/152 (34%), Positives = 83/152 (54%)
Query: 29 GKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLA 88
G+ L H+ K++ T EAL ++S+ G+ R FG+AG KDK+ + Q +++ K+ S L+
Sbjct: 46 GEHLILHINKKDLTTNEALKILSETSGVKIRDFGYAGFKDKQGSTFQYLSMPKKFESFLS 105
Query: 89 ALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFIN 148
+ + I L F + + L +G L GN F I L+ V+ ++ + +L + GF N
Sbjct: 106 NFSHPKLKI-LETFIHENK-LRIGHLKGNTFFIRLKKVLPSDALKLEQALMNLDKQGFTN 163
Query: 149 YFGLQRFGSGSVPTHLVGATLLRGEWKSAVKM 180
YFG QRFG + G +LRG+ VKM
Sbjct: 164 YFGYQRFGKFG-DNYKEGLEILRGKKMKNVKM 194
>UNIPROTKB|Q8EBR4 [details] [associations]
symbol:truD "tRNA pseudouridine synthase D" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01082
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR020103
InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984
GO:GO:0003723 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008033
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585
KO:K06176 PANTHER:PTHR13326 HOGENOM:HOG000224848 OMA:ALTRQWF
RefSeq:NP_718989.1 ProteinModelPortal:Q8EBR4 GeneID:1171111
KEGG:son:SO_3436 PATRIC:23526560 ProtClustDB:CLSK907171
Uniprot:Q8EBR4
Length = 370
Score = 150 (57.9 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 25 PEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQ--RVTVFKQ 82
P G+ H+ K+ +T + +++K + P+ +AG KDK +++ Q + + +
Sbjct: 34 PSGEGEHHLVHIRKDGLNTVQVAEMLAKFAKVHPKEVTYAGQKDKNAITEQWFGIRIPGK 93
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
LN + + L + K+ L +G LLGNRF +TLR V + ED+I + +
Sbjct: 94 ETPAWIELNSDRLTV-LSSSRHSKK-LRIGALLGNRFILTLRNVT-NVEDII-SRIEKVS 149
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGE 173
+ G NYFG QRFG ++G +L G+
Sbjct: 150 QIGVPNYFGEQRFGHDG-KNLVLGRQMLAGK 179
Score = 62 (26.9 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 234 LQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKG 283
L K R R MY+ + +S L+N S R+ +GT + GD V G
Sbjct: 176 LAGKKVKDRNKRSMYLSAVRSHLFNTVVSYRLTHYGTRPLA-GDCVMLAG 224
Score = 54 (24.1 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 472 EAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 519
E A ++ ++P + G + L L LP+ C+AT +REL+
Sbjct: 284 EHAGLEQERRPLLLEPQGLKHEQTSDGLVLEFILPAGCFATSLLRELV 331
>TIGR_CMR|SO_3436 [details] [associations]
symbol:SO_3436 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_01082 InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268
PROSITE:PS50984 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
HOGENOM:HOG000224848 OMA:ALTRQWF RefSeq:NP_718989.1
ProteinModelPortal:Q8EBR4 GeneID:1171111 KEGG:son:SO_3436
PATRIC:23526560 ProtClustDB:CLSK907171 Uniprot:Q8EBR4
Length = 370
Score = 150 (57.9 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 25 PEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQ--RVTVFKQ 82
P G+ H+ K+ +T + +++K + P+ +AG KDK +++ Q + + +
Sbjct: 34 PSGEGEHHLVHIRKDGLNTVQVAEMLAKFAKVHPKEVTYAGQKDKNAITEQWFGIRIPGK 93
Query: 83 RASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
LN + + L + K+ L +G LLGNRF +TLR V + ED+I + +
Sbjct: 94 ETPAWIELNSDRLTV-LSSSRHSKK-LRIGALLGNRFILTLRNVT-NVEDII-SRIEKVS 149
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGE 173
+ G NYFG QRFG ++G +L G+
Sbjct: 150 QIGVPNYFGEQRFGHDG-KNLVLGRQMLAGK 179
Score = 62 (26.9 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 234 LQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKG 283
L K R R MY+ + +S L+N S R+ +GT + GD V G
Sbjct: 176 LAGKKVKDRNKRSMYLSAVRSHLFNTVVSYRLTHYGTRPLA-GDCVMLAG 224
Score = 54 (24.1 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 472 EAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 519
E A ++ ++P + G + L L LP+ C+AT +REL+
Sbjct: 284 EHAGLEQERRPLLLEPQGLKHEQTSDGLVLEFILPAGCFATSLLRELV 331
>UNIPROTKB|Q604M0 [details] [associations]
symbol:truD "tRNA pseudouridine synthase D" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01082 InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268
PROSITE:PS50984 GO:GO:0003723 GO:GO:0008033 EMBL:AE017282
GenomeReviews:AE017282_GR GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
TIGRFAMs:TIGR00094 HOGENOM:HOG000224848 ProtClustDB:PRK00984
OMA:ALTRQWF RefSeq:YP_114930.1 ProteinModelPortal:Q604M0
GeneID:3103594 KEGG:mca:MCA2519 PATRIC:22608902 Uniprot:Q604M0
Length = 354
Score = 154 (59.3 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 57/181 (31%), Positives = 87/181 (48%)
Query: 25 PEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTV-FKQR 83
P G+ H+ K ++T I+++ G+ P G+AG KD+ +V+TQ +V +
Sbjct: 43 PTGQGEHAFLHIRKTGENTDHVAQRIARLAGVKPMDVGYAGLKDRHAVTTQWFSVRLAGK 102
Query: 84 ASK-LAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLG 142
A AL I + L + ++ L G L GNRF I LRG+ D ++A ++
Sbjct: 103 ADPDWRALESESIAV-LRHTRHDRK-LKRGALAGNRFRIILRGLEGVC-DGLEARCAAIR 159
Query: 143 RNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREG-ERNE----ISKARE 197
G NYFG QRFG G G L + A+++ DPR +RN+ +S AR
Sbjct: 160 AAGVPNYFGPQRFGHG-------GRNL-----QEALRLFADPRRRIDRNKRSLYLSAARS 207
Query: 198 Y 198
Y
Sbjct: 208 Y 208
Score = 59 (25.8 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 238 KAIPRTLRMMYVHSYQSFLWNHAASARVQKHGT-EHVVVGDLVFCKGDD 285
+ I R R +Y+ + +S+L+N + RV+ HG+ V GD G +
Sbjct: 191 RRIDRNKRSLYLSAARSYLFNRVLAGRVE-HGSWNRGVEGDAFMFTGSN 238
Score = 51 (23.0 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 498 ALKLGLTLPSSCYATMAIRELLK 520
A +L +LP+ YAT +REL++
Sbjct: 323 ACELTFSLPAGTYATTVLRELVE 345
>UNIPROTKB|Q57261 [details] [associations]
symbol:truD "tRNA pseudouridine 13 synthase" species:83333
"Escherichia coli K-12" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] HAMAP:MF_01082 InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268
PROSITE:PS50984 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003723 GO:GO:0008033 EMBL:U29579
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 EMBL:L07942
eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326 TIGRFAMs:TIGR00094
HOGENOM:HOG000224848 ProtClustDB:PRK00984 OMA:ALTRQWF PIR:I69731
RefSeq:NP_417225.1 RefSeq:YP_490954.1 PDB:1SB7 PDB:1SI7 PDB:1SZW
PDBsum:1SB7 PDBsum:1SI7 PDBsum:1SZW ProteinModelPortal:Q57261
SMR:Q57261 IntAct:Q57261 PRIDE:Q57261
EnsemblBacteria:EBESCT00000000580 EnsemblBacteria:EBESCT00000016244
GeneID:12933284 GeneID:947214 KEGG:ecj:Y75_p2683 KEGG:eco:b2745
PATRIC:32120896 EchoBASE:EB2912 EcoGene:EG13109
BioCyc:EcoCyc:G7422-MONOMER BioCyc:ECOL316407:JW2715-MONOMER
BioCyc:MetaCyc:G7422-MONOMER EvolutionaryTrace:Q57261
Genevestigator:Q57261 Uniprot:Q57261
Length = 349
Score = 147 (56.8 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 25 PEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRA 84
P+ G+ + + K +T+ ++K L I R FAG KDK +V+ Q + +
Sbjct: 37 PDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCA-RVPG 95
Query: 85 SKLAALNK-RLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGR 143
++ L+ +L G ++ ++ K L LG L GN FT+ LR V + D ++ +
Sbjct: 96 KEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREV--SNRDDVEQRLIDICV 153
Query: 144 NGFINYFGLQRFGSGSVPTHLVGA 167
G NYFG QRFG G ++L GA
Sbjct: 154 KGVPNYFGAQRFGIGG--SNLQGA 175
Score = 49 (22.3 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 497 MALKLGLTLPSSCYATMAIRELLKTSTSVA 526
+ +++ LP+ +AT +REL+ T+ A
Sbjct: 316 VTVEIRFWLPAGSFATSVVRELINTTGDYA 345
Score = 48 (22.0 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 242 RTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKG 283
R R ++ + +S L+N + R++K VV GD + G
Sbjct: 188 RNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAG 229
>UNIPROTKB|Q487E7 [details] [associations]
symbol:truD "tRNA pseudouridine synthase D" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01082
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR020103
InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984
GO:GO:0003723 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0008033
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585
KO:K06176 PANTHER:PTHR13326 HOGENOM:HOG000224848 RefSeq:YP_267818.1
ProteinModelPortal:Q487E7 STRING:Q487E7 GeneID:3518358
KEGG:cps:CPS_1074 PATRIC:21465419 OMA:ALTRQWF
BioCyc:CPSY167879:GI48-1156-MONOMER Uniprot:Q487E7
Length = 367
Score = 103 (41.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 40/135 (29%), Positives = 61/135 (45%)
Query: 29 GKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQ--RVTVFKQRASK 86
G+ L H+ K +T ++K + + +AG KD+ +V+ Q + V ++
Sbjct: 39 GEHLFVHIRKTGANTLFVARELAKYFEVKEQLVSYAGLKDRFAVTEQWFGIHVPGKQEYN 98
Query: 87 LAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASAN---SLGR 143
L LN + G+ + + + L G L GNRF + LR V IKA +
Sbjct: 99 LDDLN--IEGVEVLSYKRHNKKLRTGALTGNRFELILREVTA-----IKAFTERWQKIVE 151
Query: 144 NGFINYFGLQRFGSG 158
G NYFG QRFG G
Sbjct: 152 QGVPNYFGEQRFGIG 166
Score = 69 (29.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELL 519
+Q + A+K+ LP+ CYAT +RELL
Sbjct: 316 AQEESNAVKISFFLPAGCYATTVLRELL 343
Score = 62 (26.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 245 RMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYE-SSN 303
R MY+ + +S ++N + R+Q+ + V VGD++ G + L V+ + +
Sbjct: 188 RGMYLSAARSHIFNSVLNERIQQQCFDKVAVGDVLMLAGTQSVFHLDEVDSAIQQRFTDK 247
Query: 304 DAD 306
D D
Sbjct: 248 DVD 250
>TIGR_CMR|CPS_1074 [details] [associations]
symbol:CPS_1074 "conserved hypothetical protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01082 InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268
PROSITE:PS50984 GO:GO:0003723 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
HOGENOM:HOG000224848 RefSeq:YP_267818.1 ProteinModelPortal:Q487E7
STRING:Q487E7 GeneID:3518358 KEGG:cps:CPS_1074 PATRIC:21465419
OMA:ALTRQWF BioCyc:CPSY167879:GI48-1156-MONOMER Uniprot:Q487E7
Length = 367
Score = 103 (41.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 40/135 (29%), Positives = 61/135 (45%)
Query: 29 GKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQ--RVTVFKQRASK 86
G+ L H+ K +T ++K + + +AG KD+ +V+ Q + V ++
Sbjct: 39 GEHLFVHIRKTGANTLFVARELAKYFEVKEQLVSYAGLKDRFAVTEQWFGIHVPGKQEYN 98
Query: 87 LAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASAN---SLGR 143
L LN + G+ + + + L G L GNRF + LR V IKA +
Sbjct: 99 LDDLN--IEGVEVLSYKRHNKKLRTGALTGNRFELILREVTA-----IKAFTERWQKIVE 151
Query: 144 NGFINYFGLQRFGSG 158
G NYFG QRFG G
Sbjct: 152 QGVPNYFGEQRFGIG 166
Score = 69 (29.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 492 SQGKQMALKLGLTLPSSCYATMAIRELL 519
+Q + A+K+ LP+ CYAT +RELL
Sbjct: 316 AQEESNAVKISFFLPAGCYATTVLRELL 343
Score = 62 (26.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 245 RMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYE-SSN 303
R MY+ + +S ++N + R+Q+ + V VGD++ G + L V+ + +
Sbjct: 188 RGMYLSAARSHIFNSVLNERIQQQCFDKVAVGDVLMLAGTQSVFHLDEVDSAIQQRFTDK 247
Query: 304 DAD 306
D D
Sbjct: 248 DVD 250
>UNIPROTKB|Q886L6 [details] [associations]
symbol:truD "tRNA pseudouridine synthase D" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01082 InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268
PROSITE:PS50984 GO:GO:0003723 GO:GO:0008033 EMBL:AE016853
GenomeReviews:AE016853_GR GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
HOGENOM:HOG000224848 ProtClustDB:PRK00984 OMA:ALTRQWF
RefSeq:NP_791386.1 ProteinModelPortal:Q886L6 GeneID:1183198
KEGG:pst:PSPTO_1561 PATRIC:19994374
BioCyc:PSYR223283:GJIX-1589-MONOMER Uniprot:Q886L6
Length = 352
Score = 105 (42.0 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 29 GKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVF---KQRAS 85
G+ L + K +T EA +++ G+ R+ +AG KD+++++ Q ++ K
Sbjct: 42 GEHLWLWVEKRGLNTVEAARRLARAAGVQLRTVSYAGLKDRQALTRQWFSIQLPGKADPD 101
Query: 86 KLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNG 145
AA + L ++ G K L G N FT+ L + D E + ++ G
Sbjct: 102 LSAAQDATLQILKSGRH---KRKLQRGAHAANGFTLRLTQLEGDKE-ALNQRLETIALQG 157
Query: 146 FINYFGLQRFG 156
NYFG+QRFG
Sbjct: 158 IPNYFGVQRFG 168
Score = 60 (26.2 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 238 KAIP--RTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLV 279
KA+P R +R + + +S+L+N +ARV + VGDL+
Sbjct: 184 KALPEQRAVRSRLLSTARSYLFNRVLAARVADGSWQKAQVGDLL 227
Score = 56 (24.8 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 499 LKLGLTLPSSCYATMAIRELL 519
L+L LP C+AT+ +REL+
Sbjct: 318 LQLEFVLPPGCFATVLVRELV 338
>UNIPROTKB|H0Y863 [details] [associations]
symbol:PUS7 "Pseudouridylate synthase 7 homolog"
species:9606 "Homo sapiens" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] InterPro:IPR001656
InterPro:IPR020103 GO:GO:0003723 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 PANTHER:PTHR13326 EMBL:AC073138 EMBL:AC074013
HGNC:HGNC:26033 ProteinModelPortal:H0Y863 Ensembl:ENST00000482157
Uniprot:H0Y863
Length = 132
Score = 113 (44.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 23 NWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAG 65
+WP+ G + F LYKENKDT +A+ ++SK L + P F + G
Sbjct: 90 SWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMG 132
>UNIPROTKB|Q9KUJ0 [details] [associations]
symbol:truD "tRNA pseudouridine synthase D" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01082 InterPro:IPR001656 InterPro:IPR011760
InterPro:IPR020103 InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268
PROSITE:PS50984 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 GO:GO:0008033 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 eggNOG:COG0585 KO:K06176 PANTHER:PTHR13326
ProtClustDB:PRK00984 OMA:ALTRQWF PIR:E82311 RefSeq:NP_230181.1
ProteinModelPortal:Q9KUJ0 DNASU:2615821 GeneID:2615821
KEGG:vch:VC0530 PATRIC:20080164 Uniprot:Q9KUJ0
Length = 361
Score = 112 (44.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 29 GKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASK-- 86
G+ L + K ++T ++K G+ R+ +AG KD+ +V+ Q ++V
Sbjct: 42 GEHLMVRIRKTGENTSFVANELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPD 101
Query: 87 LAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGF 146
+A + I + + + L G L GN F +TL V D V+ + ++ G
Sbjct: 102 FSAFLAQYPSIEILEVTRHDKKLRPGDLQGNEFVVTL-SEVSDVAAVL-SRLETVAELGV 159
Query: 147 INYFGLQRFG 156
NYFG QRFG
Sbjct: 160 PNYFGSQRFG 169
Score = 47 (21.6 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 245 RMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCK 282
R +Y+ + +S+++N S R+++ + GD+ +
Sbjct: 194 RSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAE 231
Score = 38 (18.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 493 QGKQMALKLGLTLPSSCYATMAIRELLK 520
Q ++ + L +L + +AT +REL++
Sbjct: 311 QVQEDQITLRFSLDAGSFATSLVRELIE 338
>TIGR_CMR|VC_0530 [details] [associations]
symbol:VC_0530 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01082
InterPro:IPR001656 InterPro:IPR011760 InterPro:IPR020103
InterPro:IPR020119 Pfam:PF01142 PROSITE:PS01268 PROSITE:PS50984
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0008033
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 eggNOG:COG0585
KO:K06176 PANTHER:PTHR13326 ProtClustDB:PRK00984 OMA:ALTRQWF
PIR:E82311 RefSeq:NP_230181.1 ProteinModelPortal:Q9KUJ0
DNASU:2615821 GeneID:2615821 KEGG:vch:VC0530 PATRIC:20080164
Uniprot:Q9KUJ0
Length = 361
Score = 112 (44.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 29 GKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASK-- 86
G+ L + K ++T ++K G+ R+ +AG KD+ +V+ Q ++V
Sbjct: 42 GEHLMVRIRKTGENTSFVANELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPD 101
Query: 87 LAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGF 146
+A + I + + + L G L GN F +TL V D V+ + ++ G
Sbjct: 102 FSAFLAQYPSIEILEVTRHDKKLRPGDLQGNEFVVTL-SEVSDVAAVL-SRLETVAELGV 159
Query: 147 INYFGLQRFG 156
NYFG QRFG
Sbjct: 160 PNYFGSQRFG 169
Score = 47 (21.6 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 245 RMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCK 282
R +Y+ + +S+++N S R+++ + GD+ +
Sbjct: 194 RSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAE 231
Score = 38 (18.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 493 QGKQMALKLGLTLPSSCYATMAIRELLK 520
Q ++ + L +L + +AT +REL++
Sbjct: 311 QVQEDQITLRFSLDAGSFATSLVRELIE 338
>UNIPROTKB|F8VZA0 [details] [associations]
symbol:PUS7L "Pseudouridylate synthase 7 homolog-like
protein" species:9606 "Homo sapiens" [GO:0001522 "pseudouridine
synthesis" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
InterPro:IPR001656 InterPro:IPR020103 Pfam:PF01142 GO:GO:0003723
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 EMBL:AC093012
HGNC:HGNC:25276 PANTHER:PTHR13326 EMBL:AC016143 IPI:IPI01021742
ProteinModelPortal:F8VZA0 SMR:F8VZA0 Ensembl:ENST00000553166
ArrayExpress:F8VZA0 Bgee:F8VZA0 Uniprot:F8VZA0
Length = 365
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 19 RGSENWPE-QLGK--FLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQ 75
RG E Q GK + F L KEN + EA+G ++ LG++P F +AG KDK++++ Q
Sbjct: 287 RGKRPLSECQEGKVIYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQ 346
Query: 76 RVTVFKQRASKLAALNKRL 94
+ V K +L + K +
Sbjct: 347 AMVVRKVTPERLKNIEKEI 365
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 532 532 0.00092 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 620 (66 KB)
Total size of DFA: 306 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.82u 0.17s 47.99t Elapsed: 00:00:05
Total cpu time: 47.83u 0.17s 48.00t Elapsed: 00:00:05
Start: Fri May 10 06:50:53 2013 End: Fri May 10 06:50:58 2013