Query 009536
Match_columns 532
No_of_seqs 489 out of 2441
Neff 11.2
Searched_HMMs 46136
Date Thu Mar 28 14:19:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 6.7E-42 1.5E-46 324.5 42.2 437 88-526 12-472 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 5E-43 1.1E-47 354.4 35.3 418 83-515 163-740 (742)
3 PRK10077 xylE D-xylose transpo 100.0 1.5E-40 3.2E-45 333.1 43.1 432 85-528 10-477 (479)
4 TIGR00887 2A0109 phosphate:H+ 100.0 2.3E-40 4.9E-45 331.7 33.9 429 84-521 13-501 (502)
5 TIGR00879 SP MFS transporter, 100.0 3.6E-39 7.9E-44 324.1 41.1 434 83-517 24-479 (481)
6 KOG0254 Predicted transporter 100.0 9.8E-38 2.1E-42 312.4 42.4 441 85-526 43-501 (513)
7 COG2814 AraJ Arabinose efflux 100.0 8.5E-38 1.8E-42 287.5 32.7 373 84-509 10-387 (394)
8 COG2271 UhpC Sugar phosphate p 100.0 3.3E-39 7.2E-44 291.7 19.9 396 84-509 26-435 (448)
9 TIGR00898 2A0119 cation transp 100.0 4.5E-38 9.7E-43 316.9 26.7 389 108-517 110-503 (505)
10 PRK10642 proline/glycine betai 100.0 5E-37 1.1E-41 306.3 33.1 397 86-514 15-435 (490)
11 PRK03545 putative arabinose tr 100.0 2.8E-36 6.1E-41 293.3 31.7 370 84-508 6-380 (390)
12 PRK12307 putative sialic acid 100.0 5.5E-36 1.2E-40 295.4 32.8 373 84-490 15-390 (426)
13 PRK09705 cynX putative cyanate 100.0 1.1E-35 2.5E-40 288.4 33.0 376 86-516 9-389 (393)
14 PRK11663 regulatory protein Uh 100.0 1.7E-36 3.6E-41 298.2 26.5 400 85-513 21-429 (434)
15 TIGR02332 HpaX 4-hydroxyphenyl 100.0 7.5E-36 1.6E-40 291.1 29.4 390 84-497 5-410 (412)
16 PRK09556 uhpT sugar phosphate 100.0 1.5E-36 3.3E-41 301.4 24.9 395 85-506 27-447 (467)
17 KOG0253 Synaptic vesicle trans 100.0 5.7E-35 1.2E-39 257.1 29.6 415 85-516 76-527 (528)
18 PRK11551 putative 3-hydroxyphe 100.0 3E-35 6.4E-40 288.3 31.3 379 83-505 11-393 (406)
19 PRK10406 alpha-ketoglutarate t 100.0 8.8E-35 1.9E-39 286.1 34.4 379 84-506 19-422 (432)
20 PF00083 Sugar_tr: Sugar (and 100.0 9.5E-42 2.1E-46 338.8 -16.3 431 92-523 5-451 (451)
21 TIGR00891 2A0112 putative sial 100.0 1.2E-34 2.6E-39 284.5 34.1 388 83-492 8-400 (405)
22 TIGR00903 2A0129 major facilit 100.0 5.2E-35 1.1E-39 278.8 28.4 352 101-505 5-362 (368)
23 PRK03893 putative sialic acid 100.0 2.4E-34 5.2E-39 289.4 33.4 406 84-499 17-444 (496)
24 PRK05122 major facilitator sup 100.0 1.8E-34 3.9E-39 281.9 30.7 367 85-507 13-388 (399)
25 TIGR00890 2A0111 Oxalate/Forma 100.0 7.2E-35 1.6E-39 283.2 27.6 354 102-501 18-375 (377)
26 PRK12382 putative transporter; 100.0 1E-33 2.3E-38 275.7 32.6 362 89-507 17-388 (392)
27 PRK15034 nitrate/nitrite trans 100.0 1.1E-33 2.5E-38 270.4 30.8 376 85-509 32-455 (462)
28 PRK15075 citrate-proton sympor 100.0 1.4E-33 2.9E-38 277.8 32.2 358 85-487 13-398 (434)
29 PRK14995 methyl viologen resis 100.0 6.6E-34 1.4E-38 284.1 29.1 384 84-483 3-413 (495)
30 PRK09952 shikimate transporter 100.0 3.9E-33 8.5E-38 274.2 33.0 385 84-510 19-434 (438)
31 PRK10213 nepI ribonucleoside t 100.0 5.7E-33 1.2E-37 269.2 33.5 364 85-503 18-386 (394)
32 TIGR00893 2A0114 d-galactonate 100.0 3.7E-34 8.1E-39 280.4 24.9 388 96-505 3-396 (399)
33 PRK11273 glpT sn-glycerol-3-ph 100.0 3.1E-33 6.7E-38 276.6 29.9 394 85-508 27-435 (452)
34 PRK03699 putative transporter; 100.0 5.6E-33 1.2E-37 270.2 30.3 369 84-505 4-377 (394)
35 PRK10091 MFS transport protein 100.0 7.2E-33 1.6E-37 268.2 31.0 368 88-508 4-376 (382)
36 PRK03633 putative MFS family t 100.0 2.7E-32 5.8E-37 264.4 34.8 360 87-504 6-368 (381)
37 PRK10489 enterobactin exporter 100.0 3.2E-34 6.9E-39 281.5 21.5 383 92-522 22-413 (417)
38 KOG1330 Sugar transporter/spin 100.0 8.2E-35 1.8E-39 265.8 14.6 377 80-484 26-413 (493)
39 PLN00028 nitrate transmembrane 100.0 4.4E-33 9.4E-38 276.2 27.3 377 87-507 36-432 (476)
40 PRK09874 drug efflux system pr 100.0 3E-32 6.6E-37 267.5 30.5 372 89-508 16-398 (408)
41 PRK15402 multidrug efflux syst 100.0 2.2E-32 4.7E-37 267.6 28.6 375 83-500 9-387 (406)
42 KOG0252 Inorganic phosphate tr 100.0 7E-34 1.5E-38 258.3 16.3 430 83-524 37-513 (538)
43 TIGR00895 2A0115 benzoate tran 100.0 1.7E-32 3.7E-37 268.6 27.3 381 84-480 14-397 (398)
44 PRK10504 putative transporter; 100.0 4.5E-32 9.8E-37 270.8 30.2 383 88-487 11-419 (471)
45 TIGR00892 2A0113 monocarboxyla 100.0 5.6E-33 1.2E-37 274.1 22.9 390 85-502 17-415 (455)
46 TIGR00894 2A0114euk Na(+)-depe 100.0 1.6E-32 3.4E-37 273.4 23.7 393 82-506 14-448 (465)
47 TIGR00897 2A0118 polyol permea 100.0 2E-31 4.4E-36 259.8 30.8 375 89-505 15-398 (402)
48 KOG0255 Synaptic vesicle trans 100.0 3.5E-31 7.6E-36 267.1 32.2 408 97-524 95-508 (521)
49 TIGR00711 efflux_EmrB drug res 100.0 5E-32 1.1E-36 272.2 25.2 383 88-484 3-411 (485)
50 TIGR00712 glpT glycerol-3-phos 100.0 1.2E-31 2.7E-36 264.3 27.0 402 85-512 25-437 (438)
51 TIGR00900 2A0121 H+ Antiporter 100.0 1.2E-31 2.6E-36 259.4 26.4 351 92-485 4-365 (365)
52 TIGR00881 2A0104 phosphoglycer 100.0 1.8E-32 3.9E-37 266.6 20.6 372 95-490 3-379 (379)
53 PRK11043 putative transporter; 100.0 8.2E-31 1.8E-35 256.2 31.5 350 89-485 8-359 (401)
54 TIGR00899 2A0120 sugar efflux 100.0 4.2E-31 9.2E-36 256.4 29.3 359 94-505 4-371 (375)
55 PRK10133 L-fucose transporter; 100.0 3E-31 6.5E-36 259.7 28.1 369 85-502 24-427 (438)
56 PRK11195 lysophospholipid tran 100.0 4.4E-31 9.6E-36 255.9 28.9 371 89-508 5-380 (393)
57 PRK15403 multidrug efflux syst 100.0 1.2E-30 2.6E-35 254.3 32.0 370 86-500 15-389 (413)
58 TIGR00710 efflux_Bcr_CflA drug 100.0 7.1E-31 1.5E-35 255.8 30.1 351 87-482 5-360 (385)
59 cd06174 MFS The Major Facilita 100.0 1.2E-30 2.6E-35 251.0 30.0 343 91-505 3-349 (352)
60 PRK10473 multidrug efflux syst 100.0 7.2E-31 1.6E-35 255.8 28.2 353 89-495 5-361 (392)
61 COG2223 NarK Nitrate/nitrite t 100.0 8.1E-31 1.8E-35 238.1 23.8 379 84-508 11-401 (417)
62 KOG2532 Permease of the major 100.0 4.5E-31 9.8E-36 254.6 22.1 362 114-508 65-447 (466)
63 PRK11646 multidrug resistance 100.0 3.7E-30 8E-35 250.1 28.2 358 94-503 17-383 (400)
64 PF07690 MFS_1: Major Facilita 100.0 3.2E-31 6.9E-36 255.1 20.4 345 93-474 2-352 (352)
65 PRK10054 putative transporter; 100.0 3.2E-30 7E-35 250.0 27.0 368 89-505 9-381 (395)
66 TIGR00885 fucP L-fucose:H+ sym 100.0 6.8E-30 1.5E-34 248.0 27.7 358 89-498 5-402 (410)
67 TIGR00883 2A0106 metabolite-pr 100.0 9.9E-30 2.1E-34 248.7 29.1 358 97-495 3-388 (394)
68 PRK11010 ampG muropeptide tran 100.0 1.3E-29 2.8E-34 251.7 26.9 374 89-507 14-402 (491)
69 TIGR00896 CynX cyanate transpo 100.0 8.6E-29 1.9E-33 237.8 28.6 331 101-485 14-350 (355)
70 PRK11102 bicyclomycin/multidru 100.0 2.1E-29 4.6E-34 244.5 24.6 334 101-477 5-343 (377)
71 TIGR00902 2A0127 phenyl propri 100.0 1.1E-28 2.4E-33 238.9 28.8 359 92-503 9-374 (382)
72 PRK11652 emrD multidrug resist 100.0 1.5E-28 3.2E-33 239.7 27.8 351 85-483 6-360 (394)
73 PRK09528 lacY galactoside perm 100.0 1.3E-28 2.9E-33 241.8 27.4 381 89-510 12-405 (420)
74 PRK15011 sugar efflux transpor 100.0 6E-28 1.3E-32 234.7 30.8 361 90-505 18-388 (393)
75 KOG2533 Permease of the major 100.0 3.3E-29 7.1E-34 242.0 20.2 372 86-490 44-438 (495)
76 TIGR00889 2A0110 nucleoside tr 100.0 3.4E-28 7.4E-33 237.1 26.8 373 92-513 7-407 (418)
77 TIGR00886 2A0108 nitrite extru 100.0 1.3E-28 2.7E-33 238.2 22.9 346 89-469 3-365 (366)
78 PRK11128 putative 3-phenylprop 100.0 2.4E-27 5.1E-32 229.7 29.0 353 96-501 13-372 (382)
79 KOG3764 Vesicular amine transp 100.0 1.5E-29 3.2E-34 226.2 11.3 344 119-507 101-453 (464)
80 KOG2504 Monocarboxylate transp 100.0 5.2E-29 1.1E-33 243.4 15.4 402 85-506 44-474 (509)
81 TIGR00882 2A0105 oligosacchari 100.0 4.8E-27 1E-31 229.0 28.8 376 89-505 4-392 (396)
82 PRK11902 ampG muropeptide tran 100.0 3.9E-27 8.4E-32 229.9 26.1 366 93-504 5-386 (402)
83 PRK08633 2-acyl-glycerophospho 100.0 1.2E-26 2.7E-31 256.9 30.4 366 94-499 16-401 (1146)
84 PF05977 MFS_3: Transmembrane 100.0 1E-26 2.2E-31 228.5 25.8 372 88-505 11-391 (524)
85 PRK06814 acylglycerophosphoeth 100.0 9.9E-27 2.1E-31 256.4 28.6 344 124-501 52-415 (1140)
86 COG0738 FucP Fucose permease [ 100.0 1.2E-26 2.7E-31 209.4 23.1 362 89-501 15-402 (422)
87 PRK10207 dipeptide/tripeptide 100.0 2.7E-26 5.9E-31 226.6 26.2 411 87-507 14-475 (489)
88 PF06609 TRI12: Fungal trichot 99.9 3.4E-25 7.3E-30 216.5 31.1 375 92-481 49-465 (599)
89 TIGR00924 yjdL_sub1_fam amino 99.9 1.4E-25 3E-30 221.8 28.6 412 89-509 12-469 (475)
90 TIGR00792 gph sugar (Glycoside 99.9 8.4E-26 1.8E-30 223.8 23.1 333 109-487 22-384 (437)
91 KOG2615 Permease of the major 99.9 2.4E-26 5.1E-31 204.5 16.9 353 104-483 42-414 (451)
92 COG2807 CynX Cyanate permease 99.9 2.2E-24 4.8E-29 191.7 29.2 366 86-505 11-382 (395)
93 TIGR00901 2A0125 AmpG-related 99.9 1.1E-25 2.4E-30 216.4 22.5 330 103-467 4-355 (356)
94 TIGR00806 rfc RFC reduced fola 99.9 1.2E-25 2.6E-30 210.5 18.4 358 102-475 41-407 (511)
95 TIGR02718 sider_RhtX_FptX side 99.9 3.9E-24 8.4E-29 208.1 30.0 371 89-503 3-386 (390)
96 TIGR00805 oat sodium-independe 99.9 1.6E-25 3.5E-30 227.1 20.9 302 90-405 36-415 (633)
97 PTZ00207 hypothetical protein; 99.9 2.1E-23 4.5E-28 205.6 30.5 407 82-511 23-555 (591)
98 PRK09584 tppB putative tripept 99.9 2.3E-24 5E-29 214.3 23.1 407 89-506 23-477 (500)
99 PF03825 Nuc_H_symport: Nucleo 99.9 1.3E-21 2.8E-26 187.1 28.9 374 93-511 8-398 (400)
100 TIGR01301 GPH_sucrose GPH fami 99.9 2.3E-21 5E-26 187.4 29.0 400 89-513 6-476 (477)
101 KOG4686 Predicted sugar transp 99.9 1.4E-23 3.1E-28 178.8 10.7 367 82-485 39-416 (459)
102 TIGR00788 fbt folate/biopterin 99.9 9.2E-22 2E-26 194.0 21.5 387 89-496 28-431 (468)
103 PRK15462 dipeptide/tripeptide 99.9 1.3E-20 2.8E-25 183.0 27.9 402 89-500 11-469 (493)
104 KOG2563 Permease of the major 99.9 1.4E-20 3.1E-25 172.4 26.1 399 80-517 38-459 (480)
105 PRK09669 putative symporter Ya 99.9 3.5E-21 7.5E-26 190.4 24.0 332 109-487 32-392 (444)
106 PRK10429 melibiose:sodium symp 99.9 7.5E-21 1.6E-25 189.1 21.5 354 94-486 13-396 (473)
107 PF13347 MFS_2: MFS/sugar tran 99.9 7.7E-20 1.7E-24 179.9 26.3 337 108-487 23-388 (428)
108 PF01306 LacY_symp: LacY proto 99.9 3.5E-21 7.5E-26 180.1 15.5 380 88-513 8-405 (412)
109 PRK09848 glucuronide transport 99.8 5.9E-19 1.3E-23 174.9 26.0 346 94-486 15-391 (448)
110 PRK11462 putative transporter; 99.8 8.4E-19 1.8E-23 173.0 25.2 332 109-486 32-390 (460)
111 PF11700 ATG22: Vacuole efflux 99.8 9.5E-18 2.1E-22 163.7 31.2 357 123-511 69-470 (477)
112 TIGR01272 gluP glucose/galacto 99.8 7E-19 1.5E-23 163.9 17.7 276 172-495 5-302 (310)
113 COG2211 MelB Na+/melibiose sym 99.8 2.1E-17 4.5E-22 156.3 24.4 335 110-486 36-399 (467)
114 KOG2325 Predicted transporter/ 99.8 1.2E-18 2.7E-23 164.8 15.6 396 83-509 30-476 (488)
115 COG3104 PTR2 Dipeptide/tripept 99.8 9.2E-17 2E-21 150.4 23.6 415 89-509 23-488 (498)
116 COG2270 Permeases of the major 99.8 6.8E-16 1.5E-20 141.3 28.2 351 122-512 56-432 (438)
117 PF03209 PUCC: PUCC protein; 99.7 1.1E-14 2.3E-19 134.1 27.2 333 112-483 5-363 (403)
118 KOG3626 Organic anion transpor 99.7 1.3E-15 2.8E-20 150.4 21.2 305 87-405 97-477 (735)
119 PRK10642 proline/glycine betai 99.7 1.7E-16 3.6E-21 158.8 13.2 183 105-289 268-459 (490)
120 PF03137 OATP: Organic Anion T 99.7 1.3E-17 2.9E-22 165.0 -0.2 383 89-483 5-514 (539)
121 TIGR00880 2_A_01_02 Multidrug 99.6 2E-15 4.4E-20 124.0 9.0 134 130-264 4-137 (141)
122 KOG2816 Predicted transporter 99.6 1.6E-13 3.5E-18 132.5 19.4 359 87-483 22-392 (463)
123 TIGR00889 2A0110 nucleoside tr 99.5 8.8E-15 1.9E-19 143.0 7.8 160 108-267 229-405 (418)
124 PRK15011 sugar efflux transpor 99.5 1.7E-13 3.8E-18 133.3 15.8 155 108-266 237-392 (393)
125 PF03092 BT1: BT1 family; Int 99.5 6.8E-13 1.5E-17 129.3 19.8 356 108-485 11-382 (433)
126 TIGR01299 synapt_SV2 synaptic 99.5 9.4E-14 2E-18 142.0 14.2 140 127-268 598-737 (742)
127 PRK11551 putative 3-hydroxyphe 99.5 9.8E-14 2.1E-18 136.1 13.7 158 108-267 241-398 (406)
128 PRK09528 lacY galactoside perm 99.5 5.3E-14 1.1E-18 138.4 11.6 145 122-267 260-406 (420)
129 TIGR00890 2A0111 Oxalate/Forma 99.5 4.9E-14 1.1E-18 136.9 10.8 148 108-258 226-375 (377)
130 cd06174 MFS The Major Facilita 99.5 2.7E-13 5.9E-18 130.2 14.2 170 92-264 180-351 (352)
131 PRK05122 major facilitator sup 99.5 3.6E-13 7.8E-18 131.8 13.3 156 107-267 236-391 (399)
132 TIGR00902 2A0127 phenyl propri 99.5 4.5E-13 9.9E-18 129.9 13.5 166 91-261 209-375 (382)
133 PRK12382 putative transporter; 99.5 4.9E-13 1.1E-17 130.5 12.8 152 107-263 236-387 (392)
134 PRK09874 drug efflux system pr 99.5 3.8E-13 8.2E-18 132.1 12.1 159 104-263 236-396 (408)
135 TIGR00899 2A0120 sugar efflux 99.5 1E-12 2.2E-17 127.6 14.5 150 112-265 225-374 (375)
136 TIGR00892 2A0113 monocarboxyla 99.4 4.7E-13 1E-17 132.6 11.5 164 94-259 248-415 (455)
137 COG2814 AraJ Arabinose efflux 99.4 5.6E-12 1.2E-16 117.3 15.8 172 328-509 15-189 (394)
138 PRK11663 regulatory protein Uh 99.4 3.5E-12 7.6E-17 125.8 15.1 165 336-510 33-200 (434)
139 PF05631 DUF791: Protein of un 99.4 9E-12 1.9E-16 113.1 16.2 249 101-385 48-304 (354)
140 TIGR00893 2A0114 d-galactonate 99.4 2.7E-12 5.8E-17 125.6 13.6 170 89-261 217-395 (399)
141 PRK09556 uhpT sugar phosphate 99.4 2.7E-12 5.8E-17 128.0 13.8 172 89-263 260-447 (467)
142 PRK10054 putative transporter; 99.4 8.2E-12 1.8E-16 121.4 16.7 163 339-511 20-185 (395)
143 PRK10489 enterobactin exporter 99.4 1.3E-12 2.8E-17 128.5 10.6 158 107-267 243-402 (417)
144 PRK03633 putative MFS family t 99.4 2.3E-12 5E-17 125.1 12.1 151 108-264 221-371 (381)
145 TIGR02332 HpaX 4-hydroxyphenyl 99.4 1E-11 2.2E-16 121.6 16.7 178 325-512 7-193 (412)
146 PRK03545 putative arabinose tr 99.4 9E-12 1.9E-16 121.4 16.2 156 346-511 29-187 (390)
147 TIGR00883 2A0106 metabolite-pr 99.4 1.6E-12 3.5E-17 127.0 10.7 161 93-255 225-391 (394)
148 PRK03699 putative transporter; 99.4 4.3E-12 9.2E-17 123.7 13.2 171 92-266 210-381 (394)
149 TIGR00710 efflux_Bcr_CflA drug 99.4 1.1E-11 2.3E-16 120.8 15.5 162 341-512 20-184 (385)
150 TIGR00897 2A0118 polyol permea 99.4 4.6E-12 9.9E-17 123.8 12.5 168 92-264 227-400 (402)
151 COG2271 UhpC Sugar phosphate p 99.4 5.8E-12 1.3E-16 115.7 12.0 175 327-511 30-209 (448)
152 TIGR00895 2A0115 benzoate tran 99.4 1E-11 2.2E-16 121.5 14.7 170 332-511 23-195 (398)
153 PRK10213 nepI ribonucleoside t 99.4 1.8E-11 4E-16 119.0 16.2 155 347-511 41-198 (394)
154 PRK03893 putative sialic acid 99.3 3.1E-12 6.7E-17 129.1 10.3 147 106-255 294-443 (496)
155 PRK09705 cynX putative cyanate 99.3 1.2E-11 2.5E-16 120.4 13.9 165 99-267 217-384 (393)
156 PRK11128 putative 3-phenylprop 99.3 1.4E-11 3.1E-16 119.5 13.6 149 106-259 224-373 (382)
157 PLN00028 nitrate transmembrane 99.3 7.4E-11 1.6E-15 117.6 18.9 158 341-508 51-219 (476)
158 TIGR00879 SP MFS transporter, 99.3 9.3E-12 2E-16 125.1 12.5 179 86-267 283-473 (481)
159 PRK14995 methyl viologen resis 99.3 2.1E-11 4.6E-16 122.3 14.2 176 327-511 7-185 (495)
160 PRK15462 dipeptide/tripeptide 99.3 7.7E-11 1.7E-15 115.2 17.4 158 338-504 21-185 (493)
161 PRK10473 multidrug efflux syst 99.3 2.8E-11 6.1E-16 118.1 14.4 170 333-512 10-182 (392)
162 TIGR00711 efflux_EmrB drug res 99.3 1.1E-11 2.5E-16 124.6 12.0 169 333-511 9-180 (485)
163 TIGR00891 2A0112 putative sial 99.3 8.1E-11 1.7E-15 115.5 17.2 176 325-511 11-191 (405)
164 TIGR00881 2A0104 phosphoglycer 99.3 1.7E-11 3.7E-16 119.1 12.3 160 342-511 11-174 (379)
165 PF01770 Folate_carrier: Reduc 99.3 1.8E-10 3.9E-15 107.8 18.1 344 111-471 28-390 (412)
166 PRK10091 MFS transport protein 99.3 4.1E-11 8.8E-16 116.3 14.6 162 341-512 18-182 (382)
167 PRK10504 putative transporter; 99.3 5.6E-11 1.2E-15 119.0 16.0 169 332-510 16-187 (471)
168 PF05977 MFS_3: Transmembrane 99.3 1.6E-11 3.5E-16 121.5 11.5 159 100-261 231-390 (524)
169 TIGR00903 2A0129 major facilit 99.3 5.4E-11 1.2E-15 114.0 14.3 159 344-512 9-169 (368)
170 TIGR00900 2A0121 H+ Antiporter 99.3 4.4E-11 9.6E-16 115.5 14.0 159 342-505 15-176 (365)
171 PRK09952 shikimate transporter 99.3 3.3E-11 7.1E-16 119.0 13.0 154 112-267 276-435 (438)
172 TIGR00924 yjdL_sub1_fam amino 99.3 1.8E-10 3.9E-15 114.5 17.8 161 334-504 18-188 (475)
173 PF07690 MFS_1: Major Facilita 99.3 2E-11 4.3E-16 117.3 10.7 157 343-509 13-173 (352)
174 PRK15403 multidrug efflux syst 99.3 1.2E-10 2.5E-15 114.1 16.1 154 349-512 39-195 (413)
175 PRK11652 emrD multidrug resist 99.3 1.2E-10 2.6E-15 113.8 16.1 158 345-512 27-187 (394)
176 PRK15402 multidrug efflux syst 99.3 1E-10 2.2E-15 114.7 15.6 174 329-512 16-192 (406)
177 PRK11646 multidrug resistance 99.3 1.5E-10 3.3E-15 112.8 16.6 157 343-510 27-187 (400)
178 PRK10077 xylE D-xylose transpo 99.3 1.5E-10 3.2E-15 116.3 16.3 160 105-267 289-460 (479)
179 TIGR00886 2A0108 nitrite extru 99.3 2.3E-10 5E-15 110.6 16.9 163 339-510 14-190 (366)
180 PRK11273 glpT sn-glycerol-3-ph 99.2 5.9E-11 1.3E-15 117.8 12.4 173 89-264 255-434 (452)
181 TIGR00882 2A0105 oligosacchari 99.2 8.5E-11 1.8E-15 114.8 13.3 139 122-261 252-391 (396)
182 KOG2504 Monocarboxylate transp 99.2 5.9E-11 1.3E-15 117.0 12.1 177 87-265 298-476 (509)
183 KOG1330 Sugar transporter/spin 99.2 1.1E-11 2.3E-16 115.1 6.3 183 328-520 35-221 (493)
184 PF11700 ATG22: Vacuole efflux 99.2 1.5E-10 3.1E-15 113.6 14.2 180 86-267 280-470 (477)
185 PRK12307 putative sialic acid 99.2 1.7E-10 3.8E-15 113.9 15.0 146 340-495 32-180 (426)
186 PRK11102 bicyclomycin/multidru 99.2 1.4E-10 3.1E-15 112.6 13.4 156 346-511 11-169 (377)
187 TIGR00712 glpT glycerol-3-phos 99.2 1.8E-10 4E-15 113.9 14.1 159 346-511 47-209 (438)
188 PRK11010 ampG muropeptide tran 99.2 7.9E-10 1.7E-14 110.5 18.1 155 110-267 246-405 (491)
189 PRK11043 putative transporter; 99.2 5.8E-10 1.3E-14 109.2 16.9 152 348-509 28-182 (401)
190 TIGR00887 2A0109 phosphate:H+ 99.2 1.7E-10 3.7E-15 116.1 13.3 162 107-268 308-492 (502)
191 TIGR02718 sider_RhtX_FptX side 99.2 1.1E-10 2.5E-15 113.6 11.4 149 109-260 230-386 (390)
192 PRK10207 dipeptide/tripeptide 99.2 9.7E-10 2.1E-14 109.3 17.9 153 340-501 28-187 (489)
193 PF06813 Nodulin-like: Nodulin 99.2 1.1E-09 2.4E-14 96.5 15.3 176 86-267 2-184 (250)
194 TIGR00880 2_A_01_02 Multidrug 99.2 8.9E-11 1.9E-15 96.1 8.0 134 367-510 6-140 (141)
195 PRK09584 tppB putative tripept 99.2 1.5E-09 3.3E-14 108.5 17.5 154 339-501 34-194 (500)
196 TIGR01272 gluP glucose/galacto 99.1 6.1E-10 1.3E-14 104.0 13.4 162 86-253 139-303 (310)
197 PRK15034 nitrate/nitrite trans 99.1 2.9E-09 6.3E-14 103.1 18.3 180 327-511 35-235 (462)
198 PRK15075 citrate-proton sympor 99.1 7.9E-10 1.7E-14 109.2 14.8 138 102-241 253-396 (434)
199 TIGR00792 gph sugar (Glycoside 99.1 1.7E-10 3.8E-15 114.4 9.8 118 122-239 255-380 (437)
200 TIGR00898 2A0119 cation transp 99.1 1.8E-10 4E-15 116.4 9.4 137 129-268 360-498 (505)
201 COG2270 Permeases of the major 99.1 4.6E-10 9.9E-15 103.6 10.9 176 89-267 256-431 (438)
202 TIGR00896 CynX cyanate transpo 99.1 3E-10 6.6E-15 109.2 10.4 137 105-244 215-353 (355)
203 COG2223 NarK Nitrate/nitrite t 99.1 1.5E-09 3.3E-14 100.1 14.1 166 337-510 25-195 (417)
204 KOG0637 Sucrose transporter an 99.1 7.1E-10 1.5E-14 102.9 11.8 147 89-237 34-203 (498)
205 KOG3762 Predicted transporter 99.1 6.9E-10 1.5E-14 104.9 11.9 156 341-505 386-544 (618)
206 TIGR00894 2A0114euk Na(+)-depe 99.1 5.5E-10 1.2E-14 111.6 12.0 142 360-509 77-220 (465)
207 PRK11195 lysophospholipid tran 99.1 1.6E-09 3.5E-14 105.4 14.7 148 349-510 26-175 (393)
208 PRK10406 alpha-ketoglutarate t 99.1 1.8E-09 3.9E-14 106.6 14.4 157 107-266 263-425 (432)
209 KOG3098 Uncharacterized conser 99.1 6.6E-08 1.4E-12 92.4 23.5 313 130-478 56-409 (461)
210 PF06963 FPN1: Ferroportin1 (F 99.0 2.6E-07 5.5E-12 88.7 26.5 376 89-476 4-411 (432)
211 PF06609 TRI12: Fungal trichot 99.0 1.3E-09 2.8E-14 107.8 11.2 151 347-507 65-216 (599)
212 KOG3764 Vesicular amine transp 99.0 4.8E-10 1E-14 102.0 7.1 144 360-513 107-252 (464)
213 PF03825 Nuc_H_symport: Nucleo 99.0 2.7E-09 5.9E-14 102.6 12.5 173 89-263 209-393 (400)
214 KOG2615 Permease of the major 99.0 8E-10 1.7E-14 100.0 8.1 112 361-482 70-181 (451)
215 KOG0569 Permease of the major 99.0 6.5E-09 1.4E-13 100.2 14.9 180 85-268 268-458 (485)
216 PRK06814 acylglycerophosphoeth 99.0 1.6E-09 3.5E-14 120.4 12.6 150 105-256 243-413 (1140)
217 PRK08633 2-acyl-glycerophospho 99.0 2.4E-09 5.1E-14 119.6 13.9 142 111-255 257-400 (1146)
218 TIGR00885 fucP L-fucose:H+ sym 99.0 8E-09 1.7E-13 100.8 15.8 156 342-504 19-203 (410)
219 PRK11902 ampG muropeptide tran 99.0 5.4E-09 1.2E-13 102.3 13.1 148 111-265 234-390 (402)
220 TIGR00901 2A0125 AmpG-related 99.0 1.3E-08 2.8E-13 97.9 14.7 160 344-511 6-181 (356)
221 TIGR01301 GPH_sucrose GPH fami 99.0 3.4E-08 7.3E-13 96.5 17.3 184 328-512 7-222 (477)
222 KOG4686 Predicted sugar transp 99.0 1.7E-08 3.7E-13 87.6 13.0 170 83-258 263-436 (459)
223 COG0477 ProP Permeases of the 98.9 1.2E-08 2.6E-13 96.2 13.8 161 94-257 9-177 (338)
224 PF13347 MFS_2: MFS/sugar tran 98.9 7E-09 1.5E-13 102.3 12.1 147 89-237 227-382 (428)
225 TIGR00805 oat sodium-independe 98.9 1E-08 2.3E-13 105.0 13.3 172 334-505 41-278 (633)
226 TIGR00806 rfc RFC reduced fola 98.9 4.9E-08 1.1E-12 93.0 16.5 156 343-510 43-204 (511)
227 KOG0253 Synaptic vesicle trans 98.9 2.6E-09 5.7E-14 96.1 7.1 132 134-268 391-522 (528)
228 PRK09848 glucuronide transport 98.9 4.7E-09 1E-13 104.3 9.8 128 108-237 249-386 (448)
229 TIGR00926 2A1704 Peptide:H+ sy 98.9 1.8E-07 3.8E-12 95.3 21.1 153 107-262 8-179 (654)
230 TIGR00769 AAA ADP/ATP carrier 98.9 1.4E-06 3E-11 84.7 26.2 148 86-237 6-189 (472)
231 PRK10133 L-fucose transporter; 98.9 7.1E-08 1.5E-12 95.1 17.0 142 333-481 33-177 (438)
232 PTZ00207 hypothetical protein; 98.9 9.5E-08 2.1E-12 95.4 17.1 182 321-510 23-207 (591)
233 PF01306 LacY_symp: LacY proto 98.9 7E-09 1.5E-13 98.0 8.4 142 122-264 257-399 (412)
234 PF02487 CLN3: CLN3 protein; 98.8 1.2E-07 2.7E-12 89.1 14.8 135 127-267 62-197 (402)
235 PRK10429 melibiose:sodium symp 98.8 2.3E-08 5E-13 99.8 10.6 142 94-237 238-391 (473)
236 KOG3574 Acetyl-CoA transporter 98.8 5.9E-07 1.3E-11 81.5 18.1 360 87-485 31-433 (510)
237 KOG2532 Permease of the major 98.8 1.3E-07 2.9E-12 92.3 14.1 142 360-509 74-217 (466)
238 COG2807 CynX Cyanate permease 98.8 1.6E-07 3.5E-12 85.1 13.0 158 104-264 225-384 (395)
239 PRK09669 putative symporter Ya 98.7 8.3E-08 1.8E-12 95.2 12.0 116 123-238 263-387 (444)
240 COG3104 PTR2 Dipeptide/tripept 98.7 1.4E-07 3E-12 89.6 11.7 144 358-509 58-207 (498)
241 PF06779 DUF1228: Protein of u 98.7 6.9E-08 1.5E-12 68.4 7.0 80 99-180 4-83 (85)
242 KOG3762 Predicted transporter 98.7 1.6E-08 3.4E-13 95.9 4.9 164 97-263 381-545 (618)
243 KOG4332 Predicted sugar transp 98.7 4E-08 8.6E-13 84.5 6.4 360 103-503 53-426 (454)
244 KOG0255 Synaptic vesicle trans 98.7 1.7E-07 3.6E-12 95.2 11.8 139 360-511 119-257 (521)
245 COG0738 FucP Fucose permease [ 98.6 1.3E-06 2.8E-11 80.6 15.7 155 343-504 30-206 (422)
246 KOG2533 Permease of the major 98.5 7.8E-07 1.7E-11 87.2 12.2 145 360-513 82-232 (495)
247 TIGR00788 fbt folate/biopterin 98.5 2.9E-07 6.3E-12 91.4 9.3 124 115-240 281-414 (468)
248 KOG0252 Inorganic phosphate tr 98.5 4E-07 8.6E-12 85.0 9.0 178 87-268 304-501 (538)
249 KOG0254 Predicted transporter 98.5 2.1E-06 4.6E-11 86.7 15.2 138 362-511 92-232 (513)
250 KOG3810 Micronutrient transpor 98.5 7.9E-07 1.7E-11 79.7 9.8 350 134-504 52-417 (433)
251 KOG2325 Predicted transporter/ 98.5 1E-06 2.2E-11 84.7 10.6 149 360-513 72-234 (488)
252 PF05978 UNC-93: Ion channel r 98.4 3.2E-06 6.9E-11 68.8 11.2 106 129-235 42-147 (156)
253 PF06813 Nodulin-like: Nodulin 98.4 4.5E-06 9.7E-11 73.9 12.8 142 337-483 13-157 (250)
254 COG2211 MelB Na+/melibiose sym 98.4 3E-06 6.5E-11 81.3 12.5 147 89-236 238-393 (467)
255 KOG2816 Predicted transporter 98.4 5.1E-06 1.1E-10 81.0 14.0 138 368-517 71-208 (463)
256 PF00083 Sugar_tr: Sugar (and 98.4 8.4E-09 1.8E-13 102.8 -6.0 160 104-268 270-440 (451)
257 PRK11462 putative transporter; 98.3 8.9E-06 1.9E-10 80.8 14.2 115 122-236 261-384 (460)
258 PF03209 PUCC: PUCC protein; 98.3 6.5E-06 1.4E-10 76.8 11.1 149 111-261 233-394 (403)
259 KOG1237 H+/oligopeptide sympor 98.3 0.00043 9.4E-09 69.6 24.2 176 83-261 33-241 (571)
260 PF13000 Acatn: Acetyl-coenzym 98.3 7.7E-05 1.7E-09 71.1 17.4 144 90-237 3-178 (544)
261 PF12832 MFS_1_like: MFS_1 lik 98.2 4.1E-06 8.8E-11 59.2 5.9 71 92-164 5-75 (77)
262 KOG1479 Nucleoside transporter 98.2 0.00052 1.1E-08 64.4 21.0 172 89-268 20-207 (406)
263 PF05631 DUF791: Protein of un 98.1 0.00018 3.8E-09 66.3 15.3 154 351-513 59-221 (354)
264 COG3202 ATP/ADP translocase [E 98.0 0.0017 3.7E-08 62.1 21.6 151 85-239 25-210 (509)
265 PF03219 TLC: TLC ATP/ADP tran 98.0 0.0014 3.1E-08 64.5 21.2 150 85-238 22-205 (491)
266 TIGR00939 2a57 Equilibrative N 98.0 0.00022 4.8E-09 69.5 15.6 114 362-477 310-428 (437)
267 TIGR00926 2A1704 Peptide:H+ sy 98.0 0.00031 6.7E-09 72.0 17.1 149 356-506 18-180 (654)
268 PF00854 PTR2: POT family; In 98.0 9.4E-05 2E-09 71.5 12.8 108 155-263 2-121 (372)
269 PF02487 CLN3: CLN3 protein; 97.6 0.00052 1.1E-08 65.0 10.8 111 122-236 279-394 (402)
270 PF03092 BT1: BT1 family; Int 97.5 0.0011 2.3E-08 65.3 11.7 151 353-511 17-178 (433)
271 PF12832 MFS_1_like: MFS_1 lik 97.4 0.0013 2.8E-08 46.5 7.6 66 333-398 7-74 (77)
272 PF05978 UNC-93: Ion channel r 97.3 0.0071 1.5E-07 49.4 12.1 109 363-481 41-149 (156)
273 PF07672 MFS_Mycoplasma: Mycop 97.3 0.0058 1.3E-07 53.6 12.0 55 209-264 2-61 (267)
274 KOG2563 Permease of the major 97.3 0.0048 1E-07 58.5 12.2 135 342-483 64-202 (480)
275 PRK03612 spermidine synthase; 97.2 0.011 2.4E-07 59.3 14.6 135 114-252 42-185 (521)
276 PF06963 FPN1: Ferroportin1 (F 97.1 0.014 3E-07 56.6 13.8 148 89-238 260-417 (432)
277 TIGR00769 AAA ADP/ATP carrier 97.0 0.015 3.3E-07 57.0 13.6 108 374-482 59-190 (472)
278 KOG3626 Organic anion transpor 96.7 0.023 5E-07 58.0 12.2 181 330-511 101-345 (735)
279 KOG3097 Predicted membrane pro 96.5 0.11 2.4E-06 47.2 13.5 73 134-207 68-140 (390)
280 PF00854 PTR2: POT family; In 96.4 0.0092 2E-07 57.7 7.6 119 390-509 2-124 (372)
281 PF01733 Nucleoside_tran: Nucl 96.4 0.00064 1.4E-08 63.5 -0.5 113 364-477 187-304 (309)
282 COG0477 ProP Permeases of the 96.3 0.13 2.9E-06 47.7 14.6 142 347-496 23-173 (338)
283 PF03137 OATP: Organic Anion T 96.2 0.0013 2.8E-08 66.2 0.1 167 342-508 19-250 (539)
284 PF01770 Folate_carrier: Reduc 96.1 0.15 3.3E-06 48.8 13.3 123 372-504 54-178 (412)
285 KOG3098 Uncharacterized conser 96.0 0.34 7.3E-06 47.3 15.4 145 89-235 242-410 (461)
286 PRK03612 spermidine synthase; 95.4 0.19 4.1E-06 50.6 11.8 50 455-504 143-193 (521)
287 TIGR00939 2a57 Equilibrative N 95.2 0.19 4.2E-06 49.3 10.7 107 126-233 309-428 (437)
288 KOG3880 Predicted small molecu 94.9 0.017 3.6E-07 51.8 2.1 138 126-269 64-203 (409)
289 PF06779 DUF1228: Protein of u 94.8 0.3 6.5E-06 35.0 7.9 65 344-408 10-76 (85)
290 KOG3574 Acetyl-CoA transporter 93.8 0.78 1.7E-05 43.0 10.5 140 335-477 40-189 (510)
291 KOG1237 H+/oligopeptide sympor 93.8 1.9 4E-05 44.0 14.3 139 367-505 81-242 (571)
292 PF01733 Nucleoside_tran: Nucl 93.2 0.028 6E-07 52.6 0.3 107 129-235 187-306 (309)
293 KOG0637 Sucrose transporter an 92.7 0.088 1.9E-06 50.3 2.8 131 127-257 335-488 (498)
294 KOG2601 Iron transporter [Inor 92.3 0.47 1E-05 44.2 6.7 165 89-255 29-216 (503)
295 KOG1479 Nucleoside transporter 91.4 6.1 0.00013 37.9 13.2 28 329-356 21-48 (406)
296 PF03219 TLC: TLC ATP/ADP tran 90.6 2.6 5.7E-05 41.9 10.6 110 372-482 72-205 (491)
297 KOG3880 Predicted small molecu 88.7 1.6 3.5E-05 39.7 6.6 110 123-237 287-402 (409)
298 KOG4332 Predicted sugar transp 87.8 7.4 0.00016 34.8 10.0 134 126-260 284-426 (454)
299 COG3202 ATP/ADP translocase [E 87.5 25 0.00053 34.8 14.2 112 371-482 74-209 (509)
300 PF06912 DUF1275: Protein of u 85.1 25 0.00054 30.6 13.3 38 204-241 153-190 (209)
301 KOG4830 Predicted sugar transp 85.0 0.078 1.7E-06 46.4 -3.3 66 90-157 20-94 (412)
302 KOG2881 Predicted membrane pro 80.7 21 0.00045 31.6 9.5 34 369-402 250-283 (294)
303 COG4262 Predicted spermidine s 80.3 21 0.00046 33.4 9.9 96 108-204 28-132 (508)
304 PF02535 Zip: ZIP Zinc transpo 73.7 76 0.0016 29.7 12.5 33 177-209 260-293 (317)
305 PRK10263 DNA translocase FtsK; 72.7 17 0.00037 40.4 8.5 23 468-490 142-164 (1355)
306 PF07672 MFS_Mycoplasma: Mycop 72.5 24 0.00052 31.6 7.9 101 127-228 144-254 (267)
307 COG4262 Predicted spermidine s 72.0 32 0.0007 32.3 8.8 61 439-501 123-184 (508)
308 COG3619 Predicted membrane pro 71.8 70 0.0015 28.1 13.6 32 122-153 53-84 (226)
309 PF11947 DUF3464: Protein of u 71.0 11 0.00025 30.4 5.2 41 432-472 105-145 (153)
310 KOG3810 Micronutrient transpor 66.2 24 0.00051 33.2 6.8 110 126-238 273-384 (433)
311 COG5336 Uncharacterized protei 65.6 18 0.00039 27.0 4.7 29 128-156 46-75 (116)
312 PF02990 EMP70: Endomembrane p 63.4 66 0.0014 32.7 10.2 25 365-389 303-327 (521)
313 COG4769 Predicted membrane pro 62.4 7.9 0.00017 31.3 2.7 53 132-190 81-133 (181)
314 PF11947 DUF3464: Protein of u 62.2 40 0.00087 27.4 6.6 51 175-228 95-145 (153)
315 KOG2601 Iron transporter [Inor 61.8 1.3E+02 0.0027 29.0 10.5 45 456-500 174-218 (503)
316 PF13000 Acatn: Acetyl-coenzym 59.6 51 0.0011 32.8 8.1 51 179-229 407-457 (544)
317 COG5336 Uncharacterized protei 54.5 24 0.00053 26.3 3.8 34 452-485 37-70 (116)
318 PF11151 DUF2929: Protein of u 47.0 59 0.0013 21.3 4.4 46 221-267 10-55 (57)
319 PF02632 BioY: BioY family; I 47.0 62 0.0013 26.3 5.6 42 130-171 59-100 (148)
320 PF02694 UPF0060: Uncharacteri 45.4 37 0.00081 25.4 3.7 51 124-174 54-104 (107)
321 PF06027 DUF914: Eukaryotic pr 45.1 1.5E+02 0.0033 28.0 8.7 39 85-125 8-46 (334)
322 KOG3097 Predicted membrane pro 44.3 2.8E+02 0.0062 26.2 10.4 32 369-400 68-99 (390)
323 KOG1278 Endosomal membrane pro 44.0 40 0.00086 33.6 4.7 10 316-325 318-327 (628)
324 COG1230 CzcD Co/Zn/Cd efflux s 42.4 1.9E+02 0.004 26.8 8.5 82 84-173 22-106 (296)
325 PRK02237 hypothetical protein; 41.3 61 0.0013 24.4 4.2 50 125-174 57-106 (109)
326 COG1268 BioY Uncharacterized c 40.8 70 0.0015 27.0 5.2 24 130-153 88-111 (184)
327 TIGR02230 ATPase_gene1 F0F1-AT 40.6 1.5E+02 0.0033 22.2 6.2 28 373-400 57-84 (100)
328 COG1288 Predicted membrane pro 38.1 4E+02 0.0087 26.2 11.5 98 158-256 358-470 (481)
329 PF11299 DUF3100: Protein of u 37.6 33 0.00071 29.9 2.8 88 144-232 127-225 (241)
330 PF01914 MarC: MarC family int 36.5 2E+02 0.0044 24.9 7.6 64 440-504 22-86 (203)
331 TIGR01666 YCCS hypothetical me 35.5 3.5E+02 0.0076 28.8 10.4 53 142-194 41-98 (704)
332 PF02694 UPF0060: Uncharacteri 33.3 1E+02 0.0022 23.2 4.3 50 359-408 54-103 (107)
333 PRK10263 DNA translocase FtsK; 31.7 77 0.0017 35.7 5.0 14 225-238 143-156 (1355)
334 COG2119 Predicted membrane pro 30.7 3.3E+02 0.0072 23.1 7.3 38 133-170 143-180 (190)
335 TIGR02230 ATPase_gene1 F0F1-AT 29.9 2E+02 0.0042 21.6 5.4 27 139-165 57-84 (100)
336 PRK02237 hypothetical protein; 29.8 1.8E+02 0.0039 22.0 5.1 50 359-408 56-105 (109)
337 PF10785 NADH-u_ox-rdase: NADH 29.5 1.4E+02 0.0031 21.6 4.6 40 138-177 32-78 (86)
338 KOG4112 Signal peptidase subun 28.8 1.2E+02 0.0026 22.0 3.9 29 458-487 24-52 (101)
339 PF12805 FUSC-like: FUSC-like 27.1 2.3E+02 0.0051 26.0 6.9 38 157-194 2-40 (284)
340 TIGR01667 YCCS_YHJK integral m 26.5 5.6E+02 0.012 27.4 10.1 54 141-194 40-98 (701)
341 PF03606 DcuC: C4-dicarboxylat 26.2 3.5E+02 0.0075 27.2 8.3 20 247-266 5-24 (465)
342 PF14012 DUF4229: Protein of u 25.1 2E+02 0.0042 19.8 4.4 26 496-521 39-64 (69)
343 PRK10692 hypothetical protein; 25.1 2E+02 0.0043 20.6 4.4 19 153-171 3-21 (92)
344 PF07456 Hpre_diP_synt_I: Hept 24.2 1.8E+02 0.004 23.6 4.8 51 130-186 67-117 (148)
345 PF03547 Mem_trans: Membrane t 23.9 1.1E+02 0.0023 29.7 4.2 16 371-386 7-22 (385)
346 COG4736 CcoQ Cbb3-type cytochr 23.3 49 0.0011 21.9 1.2 11 504-514 27-37 (60)
347 COG2233 UraA Xanthine/uracil p 22.6 7.7E+02 0.017 24.5 12.8 126 89-218 18-146 (451)
348 COG2119 Predicted membrane pro 22.6 2.3E+02 0.0049 24.0 5.1 35 367-401 142-176 (190)
349 PRK14229 camphor resistance pr 22.5 3.5E+02 0.0076 20.5 6.0 24 184-207 56-79 (108)
350 COG0387 ChaA Ca2+/H+ antiporte 22.0 6.6E+02 0.014 24.1 8.5 44 85-130 219-262 (368)
351 PF11833 DUF3353: Protein of u 21.9 2.6E+02 0.0057 24.0 5.6 31 208-238 136-166 (194)
352 KOG1397 Ca2+/H+ antiporter VCX 20.7 88 0.0019 29.8 2.7 44 82-127 285-328 (441)
353 PF06123 CreD: Inner membrane 20.6 6.4E+02 0.014 24.9 8.5 22 378-399 310-331 (430)
354 PRK10599 calcium/sodium:proton 20.1 7E+02 0.015 24.0 8.5 39 90-130 225-263 (366)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-42 Score=324.50 Aligned_cols=437 Identities=32% Similarity=0.566 Sum_probs=362.8
Q ss_pred HHHHHHHHhhhhhhccccccchhHHHH--------HhhCCCCChh----HHHHHHHHHHHHHHHHHHhhhccccccchhH
Q 009536 88 HVLIASMSNFLFGYHIGVMNGPIVSIA--------KELGFEGNPI----LEGLVVSIFIAGAFVGSISSGSLADKLGCRR 155 (532)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~ 155 (532)
.....+++.+-.++....+++..+.+. +.+|...++. ..+.+.+++.+|.++|+++.|.++||+|||.
T Consensus 12 ~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~ 91 (485)
T KOG0569|consen 12 AVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKN 91 (485)
T ss_pred HHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 345555566777888888888765443 4445333433 3577888999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhh---hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHh
Q 009536 156 TFQIDTIPLILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL 232 (532)
Q Consensus 156 ~l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 232 (532)
.+.++.++..++.++..++ +++.+++++|++.|+..|........++.|..|++.||....+.+.+..+|.+++..+
T Consensus 92 ~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~ 171 (485)
T KOG0569|consen 92 ALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVL 171 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888877764 7899999999999999999999999999999999999999999999999999999777
Q ss_pred cCC--CCCCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhh-cCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhc--
Q 009536 233 GIP--AEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCK-GGMLNDAKAVIANLWGESEINKAIEEFQLVIKKD-- 307 (532)
Q Consensus 233 ~~~--l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 307 (532)
+.. +.+... |++.+.+..+++++..+...++||+|||+.. +++.++|++.++.+++.++.+++.++.....+++
T Consensus 172 ~l~~ilGt~~~-W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~ 250 (485)
T KOG0569|consen 172 GLPSLLGTEDL-WPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEEL 250 (485)
T ss_pred ccHHhcCCCcc-hHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhcc
Confidence 643 233344 9999999999999999999999999999987 8999999999999999987666555544333333
Q ss_pred cCCCcchhhhhhcCCcchHH-HHHHHHHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhh
Q 009536 308 GSDLDSQWSELLEEPHSRVA-FIGGALFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMD 384 (532)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d 384 (532)
.+....+++++++++..+.. .+...+....++.+.+...+|...++++.|.+. +.+.....++..++..+++.++.|
T Consensus 251 ~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid 330 (485)
T KOG0569|consen 251 EKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLID 330 (485)
T ss_pred ccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22356788999998776654 455566777888999999999999999998874 477888889999999999999999
Q ss_pred hcCCchhhhhhHHHHHHHHHHHHHHhcCCCCc-cchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHH
Q 009536 385 KEGRQKLLIGSYLGMAISMLLVVGATSLPLDE-DFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSF 463 (532)
Q Consensus 385 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 463 (532)
|+|||++++.+..++.+..+++.......... .+..+..+...+.+...++.|.+|+.+.+.+|++|++.|+.+.++..
T Consensus 331 ~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~ 410 (485)
T KOG0569|consen 331 RLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVAT 410 (485)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHH
Confidence 99999999999999988877776543321111 11222345667777888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCCCCHHHHHHHhcCC
Q 009536 464 SVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEMSLNAN 526 (532)
Q Consensus 464 ~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (532)
.++.+..++-...+..+.+..|. ..|+++.+.+++..+..++.+||||+|+..|+.++.++.
T Consensus 411 ~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 411 AVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 99999999999999999999996 788889999999999999999999999999998887755
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5e-43 Score=354.38 Aligned_cols=418 Identities=19% Similarity=0.215 Sum_probs=319.7
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
+..|..+++++++.+..+++...++.++|.+.+++++ +..+.+++.+++.++.+++++++|+++||+|||++++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl--s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI--PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 4456677788888888899999999999999999999 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC----
Q 009536 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED---- 238 (532)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 238 (532)
+++++.++++++++++.++++|+++|++.|+..+...+++.|++|+++|++.++++.++..+|.++++.++..+..
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876544322
Q ss_pred ---------CcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcch-----HHH--HHHHHH
Q 009536 239 ---------DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEI-----NKA--IEEFQL 302 (532)
Q Consensus 239 ---------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~ 302 (532)
..+ ||+.+++.++++++.++..+++||+|+|+..+++.+++.+.++++...+.. ... ....+.
T Consensus 321 ~~~~g~~~~~~g-WR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 321 SFQMGSAYQFHS-WRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred hhcccccccccc-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 224 999999999888888888888999999999999999999999888765421 110 000000
Q ss_pred HHHh------ccCCC-----------------cchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc---
Q 009536 303 VIKK------DGSDL-----------------DSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV--- 356 (532)
Q Consensus 303 ~~~~------~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 356 (532)
.... +.... ...++++++.+..+..++... .++.....++++..|+|.++.+.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~-~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMG-VWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00000 013455666655555444444 44445556777777877664331
Q ss_pred ---------------------------------------CC---------------------------------------
Q 009536 357 ---------------------------------------GI--------------------------------------- 358 (532)
Q Consensus 357 ---------------------------------------~~--------------------------------------- 358 (532)
+.
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 00
Q ss_pred -------------------------------C-----hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHH
Q 009536 359 -------------------------------T-----DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAIS 402 (532)
Q Consensus 359 -------------------------------~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 402 (532)
+ .......+..++.+++.++.|+++||+|||+++.++.++.+++
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~ 638 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCIS 638 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 0 0123344566888999999999999999999999998888888
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 403 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 482 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 482 (532)
.+++.+.. ....++...++..++..+..+....+++|.+|++.|++++|+.+....+|++++|.+.+.+.+
T Consensus 639 ~ll~~~~~---------s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 639 CFFLSFGN---------SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHc---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766521 122222222333333344556677899999999999999999999999999999999998877
Q ss_pred hhCcchhhHhHHHHHHHHHHhhheeeccCCCCC
Q 009536 483 TFGVAPVYAGFGGVSLLSALFAYYFIVETKGRS 515 (532)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (532)
. +...+|++.+++.++++++.+ ++||++++.
T Consensus 710 ~-~~~~pf~i~a~~lll~~ll~~-~LPET~~~~ 740 (742)
T TIGR01299 710 I-TKAAPILFASAALACGGLLAL-KLPDTRGQV 740 (742)
T ss_pred h-hhHHHHHHHHHHHHHHHHHHH-hCCCCcccc
Confidence 5 456677777777777666554 558887754
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.5e-40 Score=333.09 Aligned_cols=432 Identities=29% Similarity=0.506 Sum_probs=322.5
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhh--------CCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKEL--------GFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~ 156 (532)
..+.+++..++.+..+++...+++..|.++++| +. +..+.+++.+++.++..++++++|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESA--ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 455677778889999999999999999999988 55 78899999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhh------------hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHH
Q 009536 157 FQIDTIPLILGAIISAQA------------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL 224 (532)
Q Consensus 157 l~~~~~~~~~~~~~~~~a------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 224 (532)
++++.++++++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999998888763 23567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHH
Q 009536 225 GIITSLFLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKA 296 (532)
Q Consensus 225 g~~~g~~~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (532)
|.++++.+++.+. +..+ ||+.|++.+++.++..+..+++||+|+++..+++.+++.+..++..+.......
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 9999887765432 3345 999999988888877777788999999988888888777776666544333222
Q ss_pred HHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHH
Q 009536 297 IEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFA 374 (532)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 374 (532)
.++.....+++... .+..+.. .............+..........++.|.+.++.+.+ ...+.....++..++
T Consensus 247 ~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 247 LQEIKHSLDHGRKT----GGKLLMF-GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred HHHHHHHHHHhhhh----hhhhcch-hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHH
Confidence 22221111110000 0111110 1111111112222333344455667778887777765 345566667888899
Q ss_pred HhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccc
Q 009536 375 GALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRT 454 (532)
Q Consensus 375 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
+.++.++++||+|||++++.+..+.+++.+++....... ..........+++..+++....+..+.++.|.+|++.
T Consensus 322 ~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 397 (479)
T PRK10077 322 FTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ----APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI 397 (479)
T ss_pred HHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC----cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH
Confidence 999999999999999999999988888877765432111 1112222333444444444455777889999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHH------HhhCcchhhHhHHHHHHHHHHhhheeeccCCCCCHHHHHHHhcCCCC
Q 009536 455 RGKIMGFSFSVHWVCNFLVGLFFLDLV------ETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEMSLNANST 528 (532)
Q Consensus 455 ~~~~~g~~~~~~~~g~~i~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (532)
|+++.|+.+...+++.++++.+.+.+. +..++...|++.+++++++.++.+++.+|+|+++.+|.+++.++..+
T Consensus 398 r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 477 (479)
T PRK10077 398 RGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPETK 477 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhccc
Confidence 999999999999999999987776544 56778888888888888887777778899999988888777665544
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=2.3e-40 Score=331.65 Aligned_cols=429 Identities=20% Similarity=0.238 Sum_probs=306.9
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhh-C--CCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHh
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKEL-G--FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQID 160 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~ 160 (532)
..+..+.++.++.+.++++...++.+.|.+.+++ + .+.++.+.+++.+.+.++..++++++|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3455677888889999999999999999887753 1 112556778999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhc------HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcC
Q 009536 161 TIPLILGAIISAQAHS------LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI 234 (532)
Q Consensus 161 ~~~~~~~~~~~~~a~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 234 (532)
.+++.++.++++++++ ++.++++|+++|++.|...+....++.|++|+++|++++++.+....+|.++++.++.
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998876 7899999999999999999999999999999999999999999999999999888765
Q ss_pred CCCC-----------------------CcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChh-HHHHHHHHHcCC
Q 009536 235 PAED-----------------------DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLN-DAKAVIANLWGE 290 (532)
Q Consensus 235 ~l~~-----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~ 290 (532)
.+.. ..+ ||+.|.+.++++++..+..+++||+|+|+..+++.+ ++.+.+.+....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhccc-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 4321 124 999999999888888888889999999998877764 455555555432
Q ss_pred cchHHHHHHHHHHHHhccCCCcchhhhhhcCC---cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh--H---
Q 009536 291 SEINKAIEEFQLVIKKDGSDLDSQWSELLEEP---HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--A--- 362 (532)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--- 362 (532)
+..++ .++.+...+ +++..+..++++++++ +.++..+......+.....++....+.|.++++.|.+.. +
T Consensus 252 ~~~~~-~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~ 329 (502)
T TIGR00887 252 KIEAE-PDEVEKAST-AVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNA 329 (502)
T ss_pred ccccC-cccccchhc-cccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhH
Confidence 21111 011110001 1111123566776532 222222222222222222333445567777777665421 1
Q ss_pred ---------HHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHH
Q 009536 363 ---------LASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFT 433 (532)
Q Consensus 363 ---------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (532)
.......++.+++.++.++++||+|||++++.+..+.++++.++...... ...........+....
T Consensus 330 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~ 404 (502)
T TIGR00887 330 YEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH-----LSTHGFLAIYVLAQFF 404 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHH
Confidence 01233445667788899999999999999888887777666655542110 0111111122222223
Q ss_pred HhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh----------hCcchhhHhHHHHHHHHHHh
Q 009536 434 FAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET----------FGVAPVYAGFGGVSLLSALF 503 (532)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~ 503 (532)
++.+..+..+.+..|.+|++.|+++.|+.+.+..++++++|.+.+.+.+. .++...|.+++++++++.+.
T Consensus 405 ~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 405 ANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 34555667778889999999999999999999999999999999999884 34456778888877777664
Q ss_pred hheeeccCCCCCHHHHHH
Q 009536 504 AYYFIVETKGRSLEEIEM 521 (532)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~ 521 (532)
. +++||+++++.+|+++
T Consensus 485 ~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 485 T-LLIPETKGKSLEELSG 501 (502)
T ss_pred h-eEeccCCCCCHHhhhC
Confidence 4 6779999998877654
No 5
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=3.6e-39 Score=324.10 Aligned_cols=434 Identities=34% Similarity=0.637 Sum_probs=324.6
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCC------CChhHHHHHHHHHHHHHHHHHHhhhccccccchhHH
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE------GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~ 156 (532)
++.+...+++.++.++..++...+.+.++.+..+++.+ .+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 33444556666677788899999999999999999884 348899999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhh---hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhc
Q 009536 157 FQIDTIPLILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (532)
Q Consensus 157 l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 233 (532)
++++.++++++.+++.+. .+++.++++|+++|++.+...+....++.|++|+++|++++++.+.+..+|.++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999998654 35568999999999999999999999999999999999999999999999999999999
Q ss_pred ---CCCCCCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHH----HHHHHHh
Q 009536 234 ---IPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEE----FQLVIKK 306 (532)
Q Consensus 234 ---~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 306 (532)
.......+ ||+.|++.++..++..+..++++|+|++...+++.++..+...+....++......+ .......
T Consensus 184 ~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T TIGR00879 184 SGKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSI 262 (481)
T ss_pred HHhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 76666666 999999977777777777788899998877776666655555444332221111110 0011111
Q ss_pred ccCCCcchhhhhhcCC--cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhh
Q 009536 307 DGSDLDSQWSELLEEP--HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYL 382 (532)
Q Consensus 307 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l 382 (532)
+.+.....+.+.++.. ..+..++...+..+..........++.+.+.++.+.+. .+.......++.+++.++.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 342 (481)
T TIGR00879 263 EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFL 342 (481)
T ss_pred HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111233333322 13444444444455445555566778888887777653 4667777788899999999999
Q ss_pred hhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCcc--chhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHH
Q 009536 383 MDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED--FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMG 460 (532)
Q Consensus 383 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 460 (532)
.||++||+.+..+..+.+++++++.+......... ......+....++..+++.+..+....+..|.+|++.|+++.|
T Consensus 343 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 422 (481)
T TIGR00879 343 VDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGIS 422 (481)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHH
Confidence 99999999988887777777666653221110000 0123333444455555666666777778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCCCCHH
Q 009536 461 FSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLE 517 (532)
Q Consensus 461 ~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (532)
+.+...++|++++|.+.+.+.+..|+...|++.++++++++++.+++.+|+++++.+
T Consensus 423 ~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 423 IAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 999999999999999999999999999999999988888888887778887766543
No 6
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=9.8e-38 Score=312.41 Aligned_cols=441 Identities=36% Similarity=0.635 Sum_probs=355.9
Q ss_pred hHHHHHHHHHHhhhhhhc--cccccchhHHHHHhhCCCC---Ch--hHHHHHHHHHHHHHHHHHHhhhccccccchhHHH
Q 009536 85 AFPHVLIASMSNFLFGYH--IGVMNGPIVSIAKELGFEG---NP--ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTF 157 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l 157 (532)
.........++.+..+++ ....++....+.++..... +. .+.+|+.+.+.++..++++++|+++|++|||+.+
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 344455566666777775 6677777777777543211 12 3458999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC
Q 009536 158 QIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 158 ~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 237 (532)
+++.+++.++.+++++++|+.+++++|+++|+|.|........+++|..|++.||...+..+....+|..++..++....
T Consensus 123 ~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999977766654
Q ss_pred CC-cchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcC--CcchHHHHHHHHHHHH--hccCCCc
Q 009536 238 DD-PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWG--ESEINKAIEEFQLVIK--KDGSDLD 312 (532)
Q Consensus 238 ~~-~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~ 312 (532)
+. .+ ||..+.+..+.+++..+..+++||+|+|+.++++.+++++.+..+++ ..+...+.+....... ......+
T Consensus 203 ~~~~~-Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (513)
T KOG0254|consen 203 KVYAG-WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGK 281 (513)
T ss_pred cCCcc-HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccccc
Confidence 43 35 99999999999999888888899999999999999999999999998 3333333333331111 1111212
Q ss_pred chhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh-HHHHHHHHHHHHHHhhhhHhhhhhcCCchh
Q 009536 313 SQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG-ALASLLVGVTNFAGALCASYLMDKEGRQKL 391 (532)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 391 (532)
..+.++++....++..+...+..+.++.+.+...+|.+.+++..+.... .......++..+++.+++.++.||+|||++
T Consensus 282 ~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l 361 (513)
T KOG0254|consen 282 ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKL 361 (513)
T ss_pred ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 2356666645666677788888888999999999999999999888755 666777788888999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCC----ccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHH
Q 009536 392 LIGSYLGMAISMLLVVGATSLPLD----EDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHW 467 (532)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 467 (532)
++.+...+.++.+++......... .....+..+...+++...+..+..++.+.+.+|.+|.+.|+.+.++....+.
T Consensus 362 ll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~ 441 (513)
T KOG0254|consen 362 LLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNW 441 (513)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHH
Confidence 999999999999888775443211 2234456667777888888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHH-hhheeeccCCCCCHHHHHHHhcCC
Q 009536 468 VCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSAL-FAYYFIVETKGRSLEEIEMSLNAN 526 (532)
Q Consensus 468 ~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 526 (532)
+...+-......+.+..+....|..+++++.+... ..+++.||+|+++.+|+++..++.
T Consensus 442 ~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 442 LWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 98888777777666665545667777777777766 678899999999999998877654
No 7
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.5e-38 Score=287.49 Aligned_cols=373 Identities=20% Similarity=0.237 Sum_probs=294.8
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
..+..++.+.++.|..+....+....+|++.+|+|+ +..+.|++.+.|.++..++.++...+.||+.||++++..+.+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~v--s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGV--SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 345568889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
+.++++++++++||+.++++|++.|+..|..++...++..+..|+++|++++++...+.+++.++|.++|.++.+..| |
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-W 166 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-W 166 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCC
Q 009536 244 RTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
|+.|++.+.++++..+.. ..+| |+. ..++......+..+.+|+|
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~---------------------------------~~~~~~~~~~~~~~~l~~p 211 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSE---------------------------------ISGSLPGPLRTLLRLLRRP 211 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--Ccc---------------------------------CCCCCCcchhHHHHHhcCc
Confidence 999999999998876555 4466 210 0011111122345667777
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
..+..++...+.+. +.+....|...++++ .+.+ ...+....++++.++|+.++|++.|| +.|+.+.....+.
T Consensus 212 ~v~~~l~~t~l~~~----g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~ 286 (394)
T COG2814 212 GVLLGLLATFLFMT----GHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLL 286 (394)
T ss_pred hHHHHHHHHHHHHc----chhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHH
Confidence 76665554444433 333444444444444 4544 45788888999999999999999999 8888888777777
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc-cccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
++..+.+.+. ...........+..++..... .......++ .-++.++.+.+++....|+|..+|..+.|
T Consensus 287 a~~~l~l~~~---------~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG 356 (394)
T COG2814 287 ALALLALTFT---------GASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGG 356 (394)
T ss_pred HHHHHHHHHh---------cchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776662 222233333333333333332 222233344 23567999999999999999999999999
Q ss_pred HHHHhhCcchhhHhHHHHHHHHHHhhheeec
Q 009536 479 DLVETFGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
.++|+.|+....++.+.+.+++.++.+...+
T Consensus 357 ~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 357 LVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888888887776654433
No 8
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-39 Score=291.68 Aligned_cols=396 Identities=17% Similarity=0.135 Sum_probs=298.9
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.++++++.+.+++...++.+..++.+.|.+.+|.++ |..|.|++.+++.++|.++.++.|.++||.++|+.+.+|+++
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l--sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL--SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 467789999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhc--CCCCCCcc
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG--IPAEDDPH 241 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~ 241 (532)
.++.+++++++++++.+.++-+++|+.+|..+|.+...+..|++++|||+..++++...++|..+.|++. +++..+.+
T Consensus 104 sai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~ 183 (448)
T COG2271 104 SAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG 183 (448)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 77777777
Q ss_pred hhHHHHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCC-----Ccchh
Q 009536 242 WWRTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSD-----LDSQW 315 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 315 (532)
||..|++.++++++..+.. +..+|+|+..- ....++..++..+..+++++. ...-.
T Consensus 184 -w~~~f~~pgiiaiival~~~~~~rd~Pqs~G-----------------LP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~ 245 (448)
T COG2271 184 -WRAAFYFPGIIAIIVALILLFLLRDRPQSEG-----------------LPPIEEYRGDPLEIYEEEKENEGLTAWQIFV 245 (448)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHhCCCccccC-----------------CCCHHHhhcCchhhhhhhccCCCccHHHHHH
Confidence 9999999999988765554 55677774211 111111111111110111111 11223
Q ss_pred hhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CC--ChhHHHHHHHHHHHHHHhhhhHhhhhhc--CCch
Q 009536 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GI--TDGALASLLVGVTNFAGALCASYLMDKE--GRQK 390 (532)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~ 390 (532)
+-++++|..|...+ ..+..+..-..+..+.|.|+.+. +. .++.+....+-+++++|.++.||++||+ |||.
T Consensus 246 ~YVL~Nk~iW~la~----a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~ 321 (448)
T COG2271 246 KYVLKNKLIWLLAL----ANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG 321 (448)
T ss_pred HHHHcChHHHHHHH----HHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc
Confidence 44566665444443 33334445566677777777654 33 3668888889999999999999999996 5665
Q ss_pred hhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHH-H
Q 009536 391 LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWV-C 469 (532)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g 469 (532)
...+.+.+.....++..+. . + ..+.......++..+++-.|..-+......|..|++..|++.|+...+.++ |
T Consensus 322 p~~~i~~~~i~~~~~~~w~--~---~-~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~G 395 (448)
T COG2271 322 PMALIFMLLITASLVLYWL--A---P-NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIG 395 (448)
T ss_pred hHHHHHHHHHHHHHHHHHc--C---C-CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhh
Confidence 5443333333222222221 1 1 112223333333333333444445556778999999999999999999999 8
Q ss_pred HHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeec
Q 009536 470 NFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 470 ~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
.+.+....|.+.|.+||...|+++.+.++++.++.....+
T Consensus 396 a~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 396 AALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred HHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999988888887776655544
No 9
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4.5e-38 Score=316.91 Aligned_cols=389 Identities=23% Similarity=0.286 Sum_probs=291.3
Q ss_pred chhHHHHHhhCCCCC---hhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHH
Q 009536 108 GPIVSIAKELGFEGN---PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGR 184 (532)
Q Consensus 108 ~~~~~~~~~~~~~~~---~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r 184 (532)
+..+.+.+|+++ + ..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.+++++++|++.++++|
T Consensus 110 ~~~~~i~~e~~l--~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDL--VCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecc--eechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 567889999999 6 88899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009536 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (532)
Q Consensus 185 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+..+++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999876643 9999999999888887777889
Q ss_pred ccChhHHhhcCChhHHHHHHHHHcCCcchH--HHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcch
Q 009536 265 VESPRWLCKGGMLNDAKAVIANLWGESEIN--KAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGI 342 (532)
Q Consensus 265 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (532)
||+|+|+..+++.+++.+.+++..+.+... .+........+...+..+..++++++++..+...+.....++.....+
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888877766554322111 111111101111111123467788888877666555444333222222
Q ss_pred hhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhH
Q 009536 343 NGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNL 422 (532)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (532)
. ..+.+..+.+.+ ........++..+++.++.+++.||+|||+.+.++.++.+++++++.+... ....
T Consensus 344 ~----~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~-------~~~~ 411 (505)
T TIGR00898 344 Y----GLVLDLGNLGGN-IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV-------DLYF 411 (505)
T ss_pred H----HHhccccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC-------CchH
Confidence 2 222222233332 345555677888899999999999999999999888888877776665321 1112
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHH
Q 009536 423 SILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSAL 502 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (532)
......++..+...+..+..+.+.+|.+|++.|+++.|+.+....+|++++|.+.+ + +..++..++.+++++.+++.+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 412 LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHH
Confidence 22222222222222334566788899999999999999999999999999999998 4 445666777777777777666
Q ss_pred hhheeeccCCCCCHH
Q 009536 503 FAYYFIVETKGRSLE 517 (532)
Q Consensus 503 ~~~~~~~~~~~~~~~ 517 (532)
+. +++||+++++.+
T Consensus 490 ~~-~~lpet~~~~l~ 503 (505)
T TIGR00898 490 LT-LFLPETKGVPLP 503 (505)
T ss_pred HH-HcCcCCCCCCCC
Confidence 55 467888876543
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5e-37 Score=306.31 Aligned_cols=397 Identities=16% Similarity=0.156 Sum_probs=267.0
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhH--HHH--HHHHHHHHHHHHHHhhhccccccchhHHHHHhh
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPIL--EGL--VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDT 161 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~ 161 (532)
++.+....++.++++++...++...|.+.++++.+.++.. .+. +.++.++++.++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 4467777889999999999999999999999975333321 222 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcHHH--------HHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhc
Q 009536 162 IPLILGAIISAQAHSLDE--------MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (532)
Q Consensus 162 ~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 233 (532)
++++++++++++++|+++ ++++|+++|++.|+.++...+++.|++|+++|+++.++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 889999999999999999999999999999999999999988888888887554
Q ss_pred CCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHH
Q 009536 234 IPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIK 305 (532)
Q Consensus 234 ~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (532)
..+. ...+ ||+.|++.++++++..++..++||+|+|...+++.++.. .+
T Consensus 175 ~~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~----------------------~~ 231 (490)
T PRK10642 175 VLISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD----------------------RE 231 (490)
T ss_pred HHHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc----------------------cc
Confidence 3321 2355 999999988777666666667889987653221110000 00
Q ss_pred hccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCCh--hHHHHHHHHHHHHHHhhhhHhh
Q 009536 306 KDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITD--GALASLLVGVTNFAGALCASYL 382 (532)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l 382 (532)
...+..+.++++++++. .+...... ...+.....++....+.|.++++ .+.+. .........++.+++.++.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 309 (490)
T PRK10642 232 GLQDGPKVSFKEIATKH-WRSLLTCI-GLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLL 309 (490)
T ss_pred cccccccCCHHHHHHHh-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001122345555532 22222222 22222233444556677777754 45543 3455556677888899999999
Q ss_pred hhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHH
Q 009536 383 MDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFS 462 (532)
Q Consensus 383 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 462 (532)
+||+|||+.+..+..+..+....+..... ...........++...+.+. .......+..|.+|++.|+++.|+.
T Consensus 310 ~dr~grr~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~-~~g~~~~~~~~~~p~~~Rg~~~g~~ 383 (490)
T PRK10642 310 SDRFGRRPFVILGSVALFVLAIPAFILIN-----SNVIGLIFAGLLMLAVILNC-FTGVMASTLPAMFPTHIRYSALAAA 383 (490)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCccchHHHHHH
Confidence 99999999887766543333222111110 00111111111222222221 1223445667899999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhC-cchhhHhHHHHHHHHHHhhheeeccCCCC
Q 009536 463 FSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYYFIVETKGR 514 (532)
Q Consensus 463 ~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (532)
+.+..+++.++|.+.+.+.+..+ +...+++..+.++++.+.. ++.||++++
T Consensus 384 ~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~pes~~~ 435 (490)
T PRK10642 384 FNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhccccCC
Confidence 77778888999999999988765 4444544444444444443 345665443
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.8e-36 Score=293.26 Aligned_cols=370 Identities=17% Similarity=0.157 Sum_probs=270.5
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
++|..++.+.++.+..........+.+|.+.+|+|. ++.+.|++.+++.+++.++++++|+++||+|||+++..+.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHM--QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 345556666666666555555666778999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
.+++++++++++|+++++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|++++.+.+..+ |
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w 162 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-W 162 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998888777 9
Q ss_pred HHHHHhhHHHHHHHHHHhc-ccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCC
Q 009536 244 RTMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
|+.|++.++++++..+..+ ++||+|+. + +......++.++++
T Consensus 163 ~~~f~~~~~~~~l~~~~~~~~~~~~~~~-----~--------------------------------~~~~~~~~~~~~~~ 205 (390)
T PRK03545 163 RTTFLAIGGGALITLLLLIKLLPLLPSE-----H--------------------------------SGSLKSLPLLFRRP 205 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCC-----C--------------------------------cchHHHHHHHHhCc
Confidence 9999998888776654433 34543310 0 00011234566666
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
..+..+....+..... .....+.+.++++ .+.+ ..+.......++.+++.++.+++.||+++|... .+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~ 280 (390)
T PRK03545 206 ALVSLYLLTVVVVTAH----FTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALL 280 (390)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHH
Confidence 5544333322222211 1122333444443 3443 456777778889999999999999999987654 344433
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
.++...+... ..+. .......+..+.+ .+..+.....+.+..| +.+++++|+.+...++|..+||.+.|
T Consensus 281 ~~~~~~l~~~--------~~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 281 LVCLLLLLPA--------ANSE-WHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred HHHHHHHHHH--------hchH-HHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333221 1111 2222222222222 2233444556667666 57899999999999999999999999
Q ss_pred HHHHhhCcchhhHhHHHHHHHHHHhhheee
Q 009536 479 DLVETFGVAPVYAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
.+.|..|++..|.+.+.+.+++.++.+...
T Consensus 351 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 351 QVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999988888888777665544
No 12
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.5e-36 Score=295.41 Aligned_cols=373 Identities=15% Similarity=0.176 Sum_probs=273.6
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.+++.+....++.+.++++.....+..|.+.+++|+ ++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGL--TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 345567788888888999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+.+.+.+..+ |
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~-w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG-W 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888887777 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCc
Q 009536 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (532)
|+.|++..+..++........||++++..++.+. ..+. .+...+.....++++++++.
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------~~~~----------~~~~~~~~~~~~~~~~~~~~ 229 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG------------KGKH----------SQSAWSVFSLSMKGLFNRAQ 229 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc------------cccc----------cccchhhhhHHHHHHHhhch
Confidence 9999986544433333222344443321110000 0000 00000001124566777666
Q ss_pred chHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHH
Q 009536 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAI 401 (532)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 401 (532)
.+......... +..+........+.|.++++.+.+ ..+.......++.+++.++.|++.||++||+.+..+.++.++
T Consensus 230 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 308 (426)
T PRK12307 230 FPLTLCVFIVL-FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 55443322222 222222333455677777777665 335566677888999999999999999999988877766665
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH-hcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 009536 402 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 480 (532)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 480 (532)
..+.+.... ..........++..++ ..+..+....++.|.+|++.||++.|+.+...++++.++|.+.|.+
T Consensus 309 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 309 FIFPLFRIP--------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred HHHHHHHHc--------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 554443311 1111222222222222 2233344556778999999999999999999999999999999999
Q ss_pred HHhhCcchhh
Q 009536 481 VETFGVAPVY 490 (532)
Q Consensus 481 ~~~~g~~~~~ 490 (532)
.+..|+....
T Consensus 381 ~~~~g~~~~~ 390 (426)
T PRK12307 381 GITMGLGAAL 390 (426)
T ss_pred HHcccHHHHH
Confidence 9998865543
No 13
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.1e-35 Score=288.36 Aligned_cols=376 Identities=13% Similarity=0.111 Sum_probs=271.0
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 165 (532)
|.....++++.+..... ...++.+|.+++|+|+ +..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGM--SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 33344444444433332 6778999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009536 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (532)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~ 245 (532)
++.+++++++|++.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++++.++..+||+
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 999999999999999999999999999999999999999997 7799999999999999999999998888776533999
Q ss_pred HHHhhHHHHHHHHHHhcccc-cChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcc
Q 009536 246 MLYIASLPGFILALGMQFTV-ESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHS 324 (532)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (532)
.+.+.++..++.++..++.. +.|+ + ++++ +....+.++++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~------------------------------~~~~--~~~~~~~l~~~~~ 207 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVA-----S------------------------------SHKT--TTTPVRVVFTPRA 207 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc-----c------------------------------ccCC--CcCCcccccCHhH
Confidence 88776665554433332222 2111 0 0000 0111223344433
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHH
Q 009536 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAIS 402 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 402 (532)
+...+ ..+.....+.....+.|.++++.+.+ +.+.......++.++++++.+++.||+++|+....+..+..++
T Consensus 208 ~~l~~----~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~ 283 (393)
T PRK09705 208 WTLGV----YFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVG 283 (393)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHH
Confidence 32222 22222234445666777777777665 4577788889999999999999999999999888877776666
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccccccccc-CccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 403 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELS-SNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
..++.... .... . ....+...+.+ +..+.......+.. |++.+++..|+.+...+++..++|.+.|++.
T Consensus 284 ~~~~~~~~-------~~~~-~-~~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~ 353 (393)
T PRK09705 284 FCGFIWLP-------LQLP-V-LWAMVCGLGLG-GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHHHcc-------chHH-H-HHHHHHHHhcc-chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65544311 1111 1 11222222222 22343444444555 4678999999999999999999999999999
Q ss_pred HhhC-cchhhHhHHHHHHHHHHhhheeeccCCCCCH
Q 009536 482 ETFG-VAPVYAGFGGVSLLSALFAYYFIVETKGRSL 516 (532)
Q Consensus 482 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (532)
|..| +...|.+.++++++..+..+.+.+|++++.+
T Consensus 354 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 354 SISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 9987 6667777777777776666777787776543
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.7e-36 Score=298.22 Aligned_cols=400 Identities=16% Similarity=0.146 Sum_probs=278.3
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
++.......++.++..++...++..+|.+.+++|+ +..+.|++.+.+.+++.+++++.|+++||+|||+++.++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGL--SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 44556667777788888888889999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009536 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr 244 (532)
+++.++++++++++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|.++++.+++.+.+..+ ||
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~ 177 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WR 177 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888777 99
Q ss_pred HHHHhhHHHHHHHH-HHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchh-hhhhcCC
Q 009536 245 TMLYIASLPGFILA-LGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW-SELLEEP 322 (532)
Q Consensus 245 ~~f~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 322 (532)
+.|++.+++.++.. +..++++|+|++...+...+... +. ++.....+..+.+.+..+ ...++++
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH----------DA----LELAQQQEGAGLSRKEILTKYVLLNP 243 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc----------cc----cccchhccccCCChhhhHHHHHhcCh
Confidence 99999887766543 34445677664321110000000 00 000000000000000111 1133444
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhc--CCchhh-hhhH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASYLMDKE--GRQKLL-IGSY 396 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~-~~~~ 396 (532)
..+..... .+........+..+.|.++. +.+.+ +++.......++.++++++.|++.||+ ++|+.. ....
T Consensus 244 ~~~~~~~~----~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~ 319 (434)
T PRK11663 244 YIWLLSFS----YVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFA 319 (434)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHH
Confidence 43332222 22222334455567777774 34554 456677778899999999999999998 333332 2222
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH-hcccccccccccccccCccccchhHHHHHHHHHHHHHHHHH
Q 009536 397 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 475 (532)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~ 475 (532)
....+....+.... ..+...... .++..++ ..+..........|.+|++.++++.|+.++..++|.+++|.
T Consensus 320 ~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~ 391 (434)
T PRK11663 320 AGILLSVGSLWLMP-------FASYVMQAA-CFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGY 391 (434)
T ss_pred HHHHHHHHHHHHcc-------cccHHHHHH-HHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcc
Confidence 22222222222111 011111111 2222222 22222223355678899999999999999999999999999
Q ss_pred HHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCC
Q 009536 476 FFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKG 513 (532)
Q Consensus 476 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (532)
+.|.+.|..|+...|.+.+++.+++++..+...+++++
T Consensus 392 ~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 392 PLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred cHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 99999999999999998888888877666555544443
No 15
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=7.5e-36 Score=291.09 Aligned_cols=390 Identities=15% Similarity=0.113 Sum_probs=273.7
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.+|..+.++++..++++++...++...|.+.+|+|+ +..+.|++.+++.+++.+++++.|+++||+|||+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL--SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 357788888889999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC-----
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED----- 238 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 238 (532)
++++.+++++++|++++++.|+++|++.+...+....++.|++|+++|++++++++.+.++|.++++++++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887653
Q ss_pred -CcchhHHHHHhhHHHHHHHHH-HhcccccChhH---HhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcc
Q 009536 239 -DPHWWRTMLYIASLPGFILAL-GMQFTVESPRW---LCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDS 313 (532)
Q Consensus 239 -~~~~wr~~f~~~~~~~~~~~~-~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (532)
..+ ||+.|++.++++++..+ ..++++|+|+. +.++ +.+...+........ .++.+...++.....+.
T Consensus 163 ~~~g-wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 234 (412)
T TIGR02332 163 ALKG-WQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEE----DKKALKEMIDNDQLT---LEQPEGAFAHAAMPQRS 234 (412)
T ss_pred Cccc-hhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHH----HHHHHHHHHHhcccc---ccccccccccccccHHH
Confidence 245 99999998888776544 44567787742 1111 111000000000000 00000000000000011
Q ss_pred hhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc--CCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCc
Q 009536 314 QWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV--GIT--DGALASLLVGVTNFAGALCASYLMDKEGRQ 389 (532)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 389 (532)
.+++++ ++. ++...+..+........+..+.|.++++. +.+ +++.......++.+++.++.|+++||+++|
T Consensus 235 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 235 MLREIF-TPA----IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred HHHHhc-ChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 233333 222 22223333334445666777888888874 333 446677788899999999999999999977
Q ss_pred hh-hhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHH
Q 009536 390 KL-LIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWV 468 (532)
Q Consensus 390 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 468 (532)
+. ......+..++..+... . ...........+...+. ....+.......|.+|++.|+++.|+.+...++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~ 380 (412)
T TIGR02332 310 KHHTALPYLFAAAGWLLASA---T-----DHNLIQLLGIIMASMGS-FSAMAIFWTTPDQSISLQARAIAIAVINATGNI 380 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHh---c-----CCHHHHHHHHHHHHHHh-hhhhhHHHhhcccccchHHHHHHHHHHHHhhhh
Confidence 74 33333333333222111 0 11111111111111111 111233345556788999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhC-cchhhHhHHHHH
Q 009536 469 CNFLVGLFFLDLVETFG-VAPVYAGFGGVS 497 (532)
Q Consensus 469 g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~ 497 (532)
|++++|.+.|.+.|..| |...+.+.+++.
T Consensus 381 g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 381 GSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred hhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 99999999999999876 888777655543
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.5e-36 Score=301.43 Aligned_cols=395 Identities=14% Similarity=0.094 Sum_probs=273.4
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
.+.++.+++++++...+++..+++..|.+.+|+|+ +..+.|++.+++.+++.+++++.|+++||+|||+++..+.+++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL--STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 45567777888888889999999999999999999 8999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHh-----hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 165 ILGAIISAQ-----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 165 ~~~~~~~~~-----a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
+++.++.++ ++|++.++++|+++|++.+...+...+++.||+|+++|+++++++..+.++|.++++++..++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 877776665 589999999999999999999999999999999999999999999999999999999887655443
Q ss_pred c--chhHHHHHhhHHHHHHHHHHhc-ccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcch-h
Q 009536 240 P--HWWRTMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ-W 315 (532)
Q Consensus 240 ~--~~wr~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (532)
. ++||..|.+.++++++..+..+ +.+++|+...... + ++. . .+.. .. ++ ...++++...... .
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~---~-~~~---~-~~~~-~~--~~--~~~~~~~~~~~~~~~ 251 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGK---A-EEI---F-GEPI-SE--ED--KETESTDMTKWQIFV 251 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCC---h-hhc---c-cCcc-ch--hh--hccccccCcHHHHHH
Confidence 2 2399999888887776554444 3455554211100 0 000 0 0000 00 00 0000000000011 1
Q ss_pred hhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhh
Q 009536 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLL 392 (532)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 392 (532)
+..++++..+...+ ..+...........+.|.++++ .+.+ +++.......++.+++.++.|+++||+++|+..
T Consensus 252 ~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~ 327 (467)
T PRK09556 252 EYVLKNPVIWLLCF----ANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRAL 327 (467)
T ss_pred HHHHcChHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchH
Confidence 22455555443332 2222233344566778877754 5655 456677777888999999999999999998876
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH-hcccccccccccccccCccccchhHHHHHHHHHH-HH
Q 009536 393 IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWV-CN 470 (532)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~ 470 (532)
.....+..++..++.... .... .......+..++ ..+..........|.+|++.+|++.|+.+...++ |.
T Consensus 328 ~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~ 399 (467)
T PRK09556 328 VACIALALIIFTLGVYQH-------ATSE-YMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGD 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHh-------cCcH-HHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhH
Confidence 654443333322222210 1111 122222222222 2222222234566999999999999999999997 77
Q ss_pred HHHHHHHHHHHH------------hhCcchhhHhHHHHHHHHHHhhhe
Q 009536 471 FLVGLFFLDLVE------------TFGVAPVYAGFGGVSLLSALFAYY 506 (532)
Q Consensus 471 ~i~~~~~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~ 506 (532)
+++|.+.|.+.| ..||...|.+..++.+++.+..++
T Consensus 400 ~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 400 SFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 567899998887777776655543
No 17
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=5.7e-35 Score=257.07 Aligned_cols=415 Identities=18% Similarity=0.224 Sum_probs=314.3
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
.|........+.....+.....+-+.|.+.+.+|. +..+..++......+..+++..||.++|++|||+.+.+..+..
T Consensus 76 q~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~--s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGP--SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhch--hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 34456666666666666666677778888899997 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009536 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr 244 (532)
++..++.+.++|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-+. ..+.+|.+....+........| ||
T Consensus 154 ~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g-wr 230 (528)
T KOG0253|consen 154 GVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG-WR 230 (528)
T ss_pred HHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-HH
Confidence 99999999999999999999999999998 898888999999999999887777 8999999999999988888888 99
Q ss_pred HHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchH-----------HHHHHH----HHHHHhccC
Q 009536 245 TMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEIN-----------KAIEEF----QLVIKKDGS 309 (532)
Q Consensus 245 ~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~ 309 (532)
|.......+..+.++..++++|+||++..+|+.+++.+.++++...+..+ ++.++. ...+.+..+
T Consensus 231 ~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~k 310 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAK 310 (528)
T ss_pred HHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcccc
Confidence 99999998888889999999999999999999999998888876544321 011111 111111222
Q ss_pred CCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcC--------------------CC--hhHHHHHH
Q 009536 310 DLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVG--------------------IT--DGALASLL 367 (532)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~--~~~~~~~~ 367 (532)
+.......++..+..+..++.... ++.+-..+++........++... .. ....-.++
T Consensus 311 e~rg~~~nLlsp~lrkttlllw~i-wfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdlli 389 (528)
T KOG0253|consen 311 EVRGGTTNLLSPKLRKTTLLLWRI-WFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLI 389 (528)
T ss_pred ccccchHhhcChHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHH
Confidence 333444555544443444333333 33333333333333333332110 01 12344566
Q ss_pred HHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccc
Q 009536 368 VGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIP 447 (532)
Q Consensus 368 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (532)
..+..+.|.++.++++||+|||+.+...++++++..+++.... . ........+..-.+..+...+.+.|..
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~--------~-rn~~tvllf~arafisg~fqvaYvYtP 460 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK--------T-RNAYTVLLFTARAFISGAFQVAYVYTP 460 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc--------C-cchhHHHHHHHHHHHhchheEEEEecC
Confidence 7889999999999999999999999999998888877776632 1 222333333344444455567899999
Q ss_pred cccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCCCCH
Q 009536 448 ELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSL 516 (532)
Q Consensus 448 ~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (532)
|++|+..|+++.|....++.+|+++.|.++ +........+..+++++++++.+...++--|+|+|..
T Consensus 461 EVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 461 EVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred cccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999999999999999999998 4444455666778888888888888777778888753
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=3e-35 Score=288.27 Aligned_cols=379 Identities=20% Similarity=0.254 Sum_probs=279.2
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
+++|..+.+.++..++++++....++..|.+.+++|. ++.+.+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGL--DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 3677788888889999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcch
Q 009536 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (532)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 242 (532)
+.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 167 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA- 167 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988877777
Q ss_pred hHHHHHhhHHHHHHHHH-HhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcC
Q 009536 243 WRTMLYIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (532)
Q Consensus 243 wr~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
||+.|++.++..++..+ ...++||+|++..++.+.++. ....+..+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~ 216 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-------------------------------APVLRALFGE 216 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-------------------------------hhhHHHHhhh
Confidence 99999988776555443 344567776532221110000 0001111111
Q ss_pred CcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
+..+..... ....+...........+.|.++++.+.+ +.+.......++.+++.++.|++.||+++|+.+..+....
T Consensus 217 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 295 (406)
T PRK11551 217 GRATATLLL-WISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGI 295 (406)
T ss_pred hhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 111111111 1111111223334455677777777654 4567777788899999999999999999999887766655
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLD 479 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 479 (532)
+++.+++... ..........++......+..+....+..|.+|++.|+++.|+.+...++|..++|.+.|.
T Consensus 296 ~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 366 (406)
T PRK11551 296 LASLAALAAA---------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQ 366 (406)
T ss_pred HHHHHHHHhc---------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhh
Confidence 5555444331 1112222222222222233445667788899999999999999999999999999999999
Q ss_pred HHHhhC-cchhhHhHHHHHHHHHHhhh
Q 009536 480 LVETFG-VAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 480 l~~~~g-~~~~~~~~~~~~~~~~~~~~ 505 (532)
+.+..+ +...+.....+.+++.++.+
T Consensus 367 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 367 LLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred hhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 998755 33444444444444444443
No 19
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=8.8e-35 Score=286.08 Aligned_cols=379 Identities=15% Similarity=0.121 Sum_probs=250.8
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCC-CChhHHHHHHHHH---HHHHHHHHHhhhccccccchhHHHHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGLVVSIF---IAGAFVGSISSGSLADKLGCRRTFQI 159 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~---~l~~~~~~~~~G~l~dr~Grr~~l~~ 159 (532)
+++..+...+++.+++.++...++...|.+.++++.+ .+..+.+...+++ +++..++++++|+++||+|||+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3555677777889999999999999999999998631 1444444444444 45555999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhcHH--------HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHH
Q 009536 160 DTIPLILGAIISAQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (532)
Q Consensus 160 ~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 231 (532)
++++++++++++++++++. .++++|+++|++.|..++...+++.|++|+++|+++.++.+.+...|.++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998874 58899999999999999999999999999999999999998888888888876
Q ss_pred hcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHH
Q 009536 232 LGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLV 303 (532)
Q Consensus 232 ~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (532)
+...+. ...+ ||+.|++.++++++........+|+|++..+
T Consensus 179 ~~~~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~------------------------------ 227 (432)
T PRK10406 179 VVVVLQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETSQQETR------------------------------ 227 (432)
T ss_pred HHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCchHHHh------------------------------
Confidence 654332 1345 9999999888877766555556666532000
Q ss_pred HHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhH
Q 009536 304 IKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCAS 380 (532)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g 380 (532)
.++ ...++++++++++.+...+. ..+......+....+.|.++++ .+.+ +.+.......++..++.++.|
T Consensus 228 ~~~----~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G 300 (432)
T PRK10406 228 ALK----EAGSLKGLWRNRRAFIMVLG---FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIG 300 (432)
T ss_pred hhc----ccccHHHHHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01235566665433322221 1121122334455677777654 4555 334555566667778888899
Q ss_pred hhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHH
Q 009536 381 YLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMG 460 (532)
Q Consensus 381 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 460 (532)
+++||++||+.+.....+.++....+...... ......................+....+.+|.+|++.|+++.|
T Consensus 301 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g 375 (432)
T PRK10406 301 ALSDKIGRRTSMLCFGSLAALFTVPILSALQN-----VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVG 375 (432)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHHHHHc-----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhh
Confidence 99999999988766555433332222111100 0111111111111111111112345567889999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHhhC-cchhhHhHHHHHHHHHHhhhe
Q 009536 461 FSFSVHWV-CNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYY 506 (532)
Q Consensus 461 ~~~~~~~~-g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 506 (532)
+.+...++ .+...|.+.+ +.+..| +...++..+++.+++.+..++
T Consensus 376 ~~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 376 LSYAVANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99988765 3445777777 445556 444455555555555544443
No 20
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=9.5e-42 Score=338.85 Aligned_cols=431 Identities=34% Similarity=0.575 Sum_probs=331.6
Q ss_pred HHHHhhhhhhccccccchhHHHH--HhhCCCC-------ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIA--KELGFEG-------NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
..++.+..+++...++...+... .++..+. +..+.+++.+...+|..+|+++.|.++||+|||+.+.++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 34556788888887777766554 2333321 12357899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh---cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 163 PLILGAIISAQAH---SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 163 ~~~~~~~~~~~a~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
+..++.++.++++ |++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++..+...
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999998887655332
Q ss_pred cc--hhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhh
Q 009536 240 PH--WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSE 317 (532)
Q Consensus 240 ~~--~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (532)
.+ .||+.+++.++++++..+...++||+|+|+..+++.+++++.+++.++.+..+++.++...+.++.++ .+..+++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 243 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQE-SKASWRD 243 (451)
T ss_pred cccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccc-cceeeee
Confidence 21 39999999999998888888999999999999999999999998866554333333222222221111 1256777
Q ss_pred hhcCCc-chHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhH
Q 009536 318 LLEEPH-SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSY 396 (532)
Q Consensus 318 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 396 (532)
+++++. .++.+....+..+..+.+.....+|.+.++++.+.++.........+..+++.+++.++.||+|||++++.+.
T Consensus 244 l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~ 323 (451)
T PF00083_consen 244 LFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL 323 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 777755 3444444445555555566667778888877777665544555666777788888889999999999999888
Q ss_pred HHHHHHHHHHH-HHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHH
Q 009536 397 LGMAISMLLVV-GATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 475 (532)
Q Consensus 397 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~ 475 (532)
.+++++.+.+. ........+.......+....+....+..+..+..+.+..|.+|++.|+++.|+......+++++++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~ 403 (451)
T PF00083_consen 324 LLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPF 403 (451)
T ss_pred ccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88877776664 11110100001122333334444455666777888899999999999999999999999999999999
Q ss_pred HHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCCCCHHHHHHHh
Q 009536 476 FFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEMSL 523 (532)
Q Consensus 476 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (532)
+...+.+..+....+.++++++++..++.++++||+|+++.+|+++++
T Consensus 404 ~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 404 LFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 999888887766778888888888888888999999999999998753
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.2e-34 Score=284.46 Aligned_cols=388 Identities=16% Similarity=0.183 Sum_probs=274.6
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
+.+|+.+..+.++.+.+.++....+++.|.+.+++|+ +..+.+++.+++.++..+++++.|+++||+|||+++.++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL--TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4567778889999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcc-
Q 009536 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH- 241 (532)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~- 241 (532)
+.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888765432
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcC
Q 009536 242 WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
+||+.|++.++..++..+....+||++++...+++.+...+..++..+.... .+...+......+. +.
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--~~ 233 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHR----------IANIVMTLAAAMVQ--SA 233 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchh----------hhhhhhhhhHHhhh--hh
Confidence 3999999877776666666666787765433222111111111111000000 00000000000011 01
Q ss_pred CcchHHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHH
Q 009536 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLG 398 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 398 (532)
...+..+...................+.|.++. +.+.+ +.+.......++.+++.++.+++.||++||+.+..+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 313 (405)
T TIGR00891 234 GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLA 313 (405)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHH
Confidence 111111111111111111122233344555554 34554 456677778899999999999999999999988777665
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 399 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
..+....+... ......+....++......+..+....++.|.+|++.|+++.|+.+.+.++|..++|.+.|
T Consensus 314 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g 385 (405)
T TIGR00891 314 GQLLIIPVFAI--------GANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGA 385 (405)
T ss_pred HHHHHHHHHHh--------CCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHH
Confidence 43333222221 1112222222222333334445556678889999999999999999999999999999999
Q ss_pred HHHHhhC-cchhhHh
Q 009536 479 DLVETFG-VAPVYAG 492 (532)
Q Consensus 479 ~l~~~~g-~~~~~~~ 492 (532)
.+.|..| |...+..
T Consensus 386 ~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 386 LLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHhccccchhHHh
Confidence 9999998 7655543
No 22
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5.2e-35 Score=278.83 Aligned_cols=352 Identities=13% Similarity=0.051 Sum_probs=244.8
Q ss_pred hccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHH
Q 009536 101 YHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEM 180 (532)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l 180 (532)
.....+++.+|.+.+|+|+ +..+.|++.+++.+++.+++++.|+++||+|||+++..+......+.+....++|++++
T Consensus 5 ~~~~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDV--SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHHHHHhhHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3445678899999999999 89999999999999999999999999999999988776655555544333334799999
Q ss_pred HHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHH-
Q 009536 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL- 259 (532)
Q Consensus 181 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~- 259 (532)
+++|+++|++.+. .......++|++|+++|++++++.+.+..+|.++++++++++.+..+ ||+.|++.++++++..+
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHH
Confidence 9999999999986 55666677999999999999999999999999999999999988877 99999998887766544
Q ss_pred HhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhh
Q 009536 260 GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQF 339 (532)
Q Consensus 260 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
..+++||+|++.. +. .+.+ + . ..+++++++++..+...+.. +...
T Consensus 161 ~~~~lp~~p~~~~---~~-------------~~~~----~---~--------~~~~~~ll~~~~~~~~~~~~----~~~~ 205 (368)
T TIGR00903 161 VLAALPALPFQAA---EG-------------FGFK----D---A--------VKEFGALAGRKDLWIIGAIL----GFGV 205 (368)
T ss_pred HHHHcCCCCCCCC---CC-------------cchH----H---H--------HHHHHHHHcChhHHHHHHHH----HHHH
Confidence 4456788775310 00 0000 0 0 01355677777655444333 3333
Q ss_pred cchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCc---hhhhh-hHHHHHHHHHHHHHHhcCCCC
Q 009536 340 AGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQ---KLLIG-SYLGMAISMLLVVGATSLPLD 415 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~ 415 (532)
.....+..|+|.++++.+.+.. ......+..+.+.+..++++||..|| +.... ...+.++....+..
T Consensus 206 ~~~~~~~~wlp~~L~~~g~s~~--~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~------- 276 (368)
T TIGR00903 206 ALFDNLAIWLEAALRPAGLEDI--AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF------- 276 (368)
T ss_pred HHHHHHHHHHHHHHHHCCCChH--HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH-------
Confidence 3455666788888887766532 22223333344445567888887654 22222 22222332222222
Q ss_pred ccchhhHHHHHHHHHHHHH-hcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHH
Q 009536 416 EDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFG 494 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~ 494 (532)
..+..... .++...++ ..+..+..+.+.+|.+|++.|+++.|+.+...++++.++|.+.+.+.. |....|.+++
T Consensus 277 --~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~ 351 (368)
T TIGR00903 277 --ELNRLALF-AFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLA 351 (368)
T ss_pred --ccccHHHH-HHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHH
Confidence 01111112 22222222 222335566888999999999999999999999999999999988773 7777888888
Q ss_pred HHHHHHHHhhh
Q 009536 495 GVSLLSALFAY 505 (532)
Q Consensus 495 ~~~~~~~~~~~ 505 (532)
+..+++.+...
T Consensus 352 ~~~~i~~~~~~ 362 (368)
T TIGR00903 352 ILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHH
Confidence 87777766653
No 23
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.4e-34 Score=289.41 Aligned_cols=406 Identities=14% Similarity=0.163 Sum_probs=279.0
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.+|+.+..++++.++..++....++.+|.+.+++|+ +..+.+++.+.+.+++.+++++.|+++||+|||++++.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGL--TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 455677888888899999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
.+++.+++++++|++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG-W 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999888877 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHH-HHH---HHHHhccCCCcchhh---
Q 009536 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIE-EFQ---LVIKKDGSDLDSQWS--- 316 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~--- 316 (532)
|+.|++.++..++.++....+||++++..++++.++..+..+.....+....... ... .............+.
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAV 253 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH
Confidence 9999886655555444445567665543222211111111111100000000000 000 000000000000000
Q ss_pred -----------h-hhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHh
Q 009536 317 -----------E-LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASY 381 (532)
Q Consensus 317 -----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~ 381 (532)
. ....+..+..........+..+........+.|.+++ +.+.+ +.+.......++.+++.++.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~ 333 (496)
T PRK03893 254 LGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGF 333 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000111111111111111112122234556777774 55555 4577778888999999999999
Q ss_pred hhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHH
Q 009536 382 LMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGF 461 (532)
Q Consensus 382 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 461 (532)
+.||+++|+.+..+..+..+..+.+.... ...........+...+.+.+..+....++.|.+|++.|++++|+
T Consensus 334 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 406 (496)
T PRK03893 334 LGDWLGTRKAYVCSLLISQLLIIPVFAIG-------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGF 406 (496)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHhhcc-------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccch
Confidence 99999999988776655554443332210 11112222222222333344445566778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHH
Q 009536 462 SFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLL 499 (532)
Q Consensus 462 ~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~ 499 (532)
.+....+|+.++|.+.|.+.|..|+...+...+++..+
T Consensus 407 ~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 407 TYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred hhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999988777655544433
No 24
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.8e-34 Score=281.90 Aligned_cols=367 Identities=20% Similarity=0.201 Sum_probs=268.3
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHH-HHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.++.+..+++..++..++..+..+.+|. +.+++|. +..+.|++.+++.+++.+++++.|+++||+|||++++.+.++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~ 90 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGF--SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCG 90 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHH
Confidence 3344677788888888899999999986 6788999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh--------hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCC
Q 009536 164 LILGAIISAQA--------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (532)
Q Consensus 164 ~~~~~~~~~~a--------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 235 (532)
++++.+.+.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++.+.+..+|.++|+.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 170 (399)
T PRK05122 91 CALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVL 170 (399)
T ss_pred HHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHH
Confidence 98887766553 2567899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchh
Q 009536 236 AEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW 315 (532)
Q Consensus 236 l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (532)
+.+..+ ||+.+++.++..++..+.....+++++ .++ .+.++
T Consensus 171 l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------------------------~~~~~ 211 (399)
T PRK05122 171 LYHWGG-LAGLGLLIMLLALLGLLLARPRPAVPP---VKG-----------------------------------ERLPF 211 (399)
T ss_pred HHHccc-HHHHHHHHHHHHHHHHHHHhcCCCCCC---CCc-----------------------------------cchhH
Confidence 888888 999988877666554443332332211 000 00011
Q ss_pred hhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhh
Q 009536 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGS 395 (532)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 395 (532)
++.+++ .+.......+. .........+.+.++.+.+..+.+.......++.+++.++.|++.||+++|+.+..+
T Consensus 212 ~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~ 285 (399)
T PRK05122 212 RRVLGR--VWPYGMGLALA----SIGFGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVS 285 (399)
T ss_pred HHHHHH--HHHHHHHHHHH----HHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 111111 01111111111 112223344555566666655556666777888899999999999999999988888
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHH
Q 009536 396 YLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 475 (532)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~ 475 (532)
..+.+++..++... .+.+..+....+...+.+ ...+.......|..|+++|+++.|+.+...++|..+++.
T Consensus 286 ~~~~~~~~~~~~~~--------~~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 356 (399)
T PRK05122 286 LLVEILGLLLLWLA--------PSPWMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGP 356 (399)
T ss_pred HHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776655541 111222222222222222 223444455668889999999999999999999999999
Q ss_pred HHHHHHHhhCcchhhHhHHHHHHHHHHhhhee
Q 009536 476 FFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 507 (532)
Q Consensus 476 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
+.|.+.+..|++..+.+.+++.+++.++.+++
T Consensus 357 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 357 LAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988888777776655443
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=7.2e-35 Score=283.24 Aligned_cols=354 Identities=18% Similarity=0.113 Sum_probs=261.0
Q ss_pred ccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHH
Q 009536 102 HIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEML 181 (532)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~ 181 (532)
.....++..|.+.+++|+ +..+.|++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++++++|++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (377)
T TIGR00890 18 YVYTWTLLAPPLGRYFGV--GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALY 95 (377)
T ss_pred HHhhhhhHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 355678899999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009536 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (532)
Q Consensus 182 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (532)
++|++.|++.+..++.....+.+++| ++|+++.++...+.++|..+++.+.+.+.+..+ ||+.|++.+++.++..+..
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 96 LTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888999997 569999999999999998876666666666666 9999999888887766555
Q ss_pred cc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhc
Q 009536 262 QF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFA 340 (532)
Q Consensus 262 ~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (532)
++ ++++|+. ..+.+ ++.+......++.++++..+..........+
T Consensus 174 ~~~~~~~~~~-~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 219 (377)
T TIGR00890 174 AFLIGYPPGQ-LIKTN-----------------------------IEVSVKDYTVWEMLRTPQFWVLYLSFFLNAV---- 219 (377)
T ss_pred HHheecCchh-ccccC-----------------------------cccchhhhhHHHHHcCccHHHHHHHHHHHhH----
Confidence 44 3333220 00000 0000001123455566655443332222211
Q ss_pred chhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccc
Q 009536 341 GINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF 418 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (532)
.......+.+.+.++.+.+. .+.......++.++++++.|++.||++||+.+..+..+.+++.+++.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------- 292 (377)
T TIGR00890 220 SGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM------- 292 (377)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc-------
Confidence 12222233444556666553 456677788899999999999999999999988888777777666554211
Q ss_pred hhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHH
Q 009536 419 SHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVS 497 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (532)
. ............+...+ ..+....+..|.+|+++|+++.|+.+...++|..++|.+.|.+.+..||+..|.+.+++.
T Consensus 293 ~-~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~ 371 (377)
T TIGR00890 293 L-NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFA 371 (377)
T ss_pred c-hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Confidence 1 11111111122222222 234455678899999999999999999999999999999999999999999888877766
Q ss_pred HHHH
Q 009536 498 LLSA 501 (532)
Q Consensus 498 ~~~~ 501 (532)
+++.
T Consensus 372 ~~~~ 375 (377)
T TIGR00890 372 LTSL 375 (377)
T ss_pred HHhc
Confidence 6543
No 26
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1e-33 Score=275.73 Aligned_cols=362 Identities=15% Similarity=0.127 Sum_probs=262.4
Q ss_pred HHHHHHHhhhhhhccccccchhHH-HHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
+..+.++.++..+..++..|.+|. +.+|+|. |..+.|++.+++.+++.++++++|+++||+|||++++.+.++..++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~--s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGF--GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCC--cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 555556667777778888888885 6789999 9999999999999999999999999999999999999998887776
Q ss_pred HHHHHh--------hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 168 AIISAQ--------AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 168 ~~~~~~--------a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
.+.+.. .++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..++|++++++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 95 GLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 553322 357899999999999999999999999999999999999999999999999999999999988887
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhh
Q 009536 240 PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (532)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
.+ ||+.+.+..+..++........+|.++. + + .+.+.++..
T Consensus 175 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------------------------~---~~~~~~~~~ 215 (392)
T PRK12382 175 FG-FAALALTTMVLPLLAWAFNGTVRKVPAH---A--------------------------------G---ERPSLWSVV 215 (392)
T ss_pred cC-hHHHHHHHHHHHHHHHHHHHhccCCCCC---c--------------------------------c---cCchHHHHH
Confidence 77 9998776655544333322222322110 0 0 000111111
Q ss_pred cCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 320 EEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
+. .+.......+. .........+.+.++++.+.+..+.......++.+++.++.|++.||+++|+.+..+..+.
T Consensus 216 ~~--~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~ 289 (392)
T PRK12382 216 GL--IWKPGLGLALQ----GVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVE 289 (392)
T ss_pred HH--HHHhHHHHHHH----HHHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHH
Confidence 10 00001111111 1122234445566666666666666666677888899999999999999999988888777
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
+++.+++... .+.. .........+.+.+ ..+.......+.+|+++||++.|+.+...++|..++|.+.|
T Consensus 290 ~~~~~~~~~~---------~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 290 TVGLLLLWLA---------PTAW-VALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred HHHHHHHHHc---------ccHH-HHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776655441 1111 12222222233322 23455566778889999999999999999999999999999
Q ss_pred HHHHhhCcchhhHhHHHHHHHHHHhhhee
Q 009536 479 DLVETFGVAPVYAGFGGVSLLSALFAYYF 507 (532)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
.+.|..||+..|.+.+++.+++.++.+..
T Consensus 360 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 360 MLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999888887777665544
No 27
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.1e-33 Score=270.38 Aligned_cols=376 Identities=15% Similarity=0.042 Sum_probs=272.6
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHH-hhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.++.+.+..++.++......+.++..+.+.+ |+|+ +..|.+++.+++.+++.++.++.|++.||+|.|+++.++.++
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~l--s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll 109 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNF--TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAI 109 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 4567888888888888889999999998876 8999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-----hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC-
Q 009536 164 LILGAIISAQA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE- 237 (532)
Q Consensus 164 ~~~~~~~~~~a-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~- 237 (532)
+++.+++++++ +|++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+.
T Consensus 110 ~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 110 LIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999987 8999999999999998 7789999999999999999999999997666666655544432211
Q ss_pred -----------------CCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHH
Q 009536 238 -----------------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEF 300 (532)
Q Consensus 238 -----------------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (532)
+.. +||.++++.+++.++..++.++..++++
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~-~~~~~~~~~~~~~iv~~i~~~~~~~~~~------------------------------- 236 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVM-SLANAAWIWVPLLAIATIAAWSGMNDIA------------------------------- 236 (462)
T ss_pred HHHHHHhccccccccccchH-HHHHHHHHHHHHHHHHHHHHHHhCCCcc-------------------------------
Confidence 122 3899988888888777666555544321
Q ss_pred HHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC-hhHHHHHHHHHHHHHHhhhh
Q 009536 301 QLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT-DGALASLLVGVTNFAGALCA 379 (532)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 379 (532)
+.+.......+.+|+|..|...+.. +..+..+..+.+++|.+.++.-.. .......+..+...+.++++
T Consensus 237 ------~~~~~~~~~~~vlk~~~~Wllslly----~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplg 306 (462)
T PRK15034 237 ------SSRASIADQLPVLQRLHLWLLSLLY----LATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVG 306 (462)
T ss_pred ------ccccCHHHHHHHhCCCchhHHHHHH----HHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhh
Confidence 0011123445677777755544333 344556666677777777653211 22222334467788889999
Q ss_pred HhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc-cccccccccccCc------
Q 009536 380 SYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSSN------ 452 (532)
Q Consensus 380 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------ 452 (532)
|+++||+|+++++.++.+.+.++...+.... +.. ...........++..+...|.+ ...+-++.+.+|+
T Consensus 307 G~LADRiG~~~vl~~~~i~~~i~~~~~~l~l--p~~--~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~ 382 (462)
T PRK15034 307 GAISDKFGGVRVTLINFIFMAIFSALLFLTL--PGT--GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRV 382 (462)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--ccc--cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcc
Confidence 9999999999999888877766654433321 111 1112222222233322223332 2345566666664
Q ss_pred ---------------cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhHhHHHHHHHHHHhhheeec
Q 009536 453 ---------------RTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 453 ---------------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
++.|.+.|+....+.+|+++.|.+.|...+..| +...|+++.+..+++.++.++...
T Consensus 383 ~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 383 KMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred cccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 157899999999999999999999999998876 777788888888888877766543
No 28
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.4e-33 Score=277.82 Aligned_cols=358 Identities=17% Similarity=0.205 Sum_probs=239.3
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHH-HHHH-----HHHHHHHHHhhhccccccchhHHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLV-VSIF-----IAGAFVGSISSGSLADKLGCRRTFQ 158 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~-----~l~~~~~~~~~G~l~dr~Grr~~l~ 158 (532)
|++....++++.+++.++...++...|.+.+|++. ++.+.+.+ .+.. .++..+++++.|+++||+|||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFP--AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 45568888899999999999999999999999998 55544433 3322 2233478999999999999999999
Q ss_pred HhhHHHHHHHHHHHhhhcHHH--------HHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHH
Q 009536 159 IDTIPLILGAIISAQAHSLDE--------MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL 230 (532)
Q Consensus 159 ~~~~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 230 (532)
.+.+++++++++++++++++. ++++|+++|++.+...+....++.|++|+++|++++++...+..+|..+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874 688999999999999999999999999999999999999888888777777
Q ss_pred HhcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHH
Q 009536 231 FLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQL 302 (532)
Q Consensus 231 ~~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (532)
.+++.+. +..+ ||+.|++.++...+........+|++++..+
T Consensus 171 ~~g~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~----------------------------- 220 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWG-WRIPFLIGCLIVPFIFLIRRSLEETEEFLAR----------------------------- 220 (434)
T ss_pred HHHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHh-----------------------------
Confidence 6666542 3456 9999998654432222222222332111000
Q ss_pred HHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhh
Q 009536 303 VIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCA 379 (532)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 379 (532)
+.+.+.+..++...+++ +.........+...........+.|.++++ .+.+ +.++...+..++.+++.++.
T Consensus 221 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (434)
T PRK15075 221 ---KHRPSMREIFRSLAANW---RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIG 294 (434)
T ss_pred ---hhccccccHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011122222221 122222222222333455667778888875 4655 44566667788899999999
Q ss_pred HhhhhhcCCchhhhhhHHHHHHHHH-HHHHHhcCCCCccchhhHHHHH-HHHHHHHHhcccccccccccccccCccccch
Q 009536 380 SYLMDKEGRQKLLIGSYLGMAISML-LVVGATSLPLDEDFSHNLSILG-TLFYIFTFAIGAGPVTGLVIPELSSNRTRGK 457 (532)
Q Consensus 380 g~l~d~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (532)
|+++||++||+.+..+..+..+... .+..... ......... ..+...+++ ...+....+..|.+|++.|++
T Consensus 295 g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~ 367 (434)
T PRK15075 295 GALSDRIGRRPVLIAFTVLAILTAYPALSWLVA------APSFARMLAVELWLSFLYG-SYNGAMVVALTEVMPAEVRTA 367 (434)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc------CCchHHHHHHHHHHHHHHH-HHHhhHHHHHHHHCCCCccch
Confidence 9999999999987765544332221 1111111 011111111 112222222 223344567789999999999
Q ss_pred hHHHHHHHHHH-HHHHHHHHHHHHHHhhCcc
Q 009536 458 IMGFSFSVHWV-CNFLVGLFFLDLVETFGVA 487 (532)
Q Consensus 458 ~~g~~~~~~~~-g~~i~~~~~g~l~~~~g~~ 487 (532)
+.|+.+.+... ++.++|.+.|.+.|..|+.
T Consensus 368 ~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 368 GFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred heeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 99997665554 5888999999999998854
No 29
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=6.6e-34 Score=284.06 Aligned_cols=384 Identities=12% Similarity=0.025 Sum_probs=276.9
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
++|..+..++++.++..++.++.+.++|.+.+|+|. +..+.+|+.+.|.++..++++++|+++||+|||++++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~--s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA--SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 467789999999999999999999999999999998 888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcC-CcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcch
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 242 (532)
++++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.++.+
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-
Confidence 9999999999999999999999999999999998888887776 67899999999999999999999999999999888
Q ss_pred hHHHHHhhHHHHHHHHHH-hcccccChhHHhhcCChhHHHHHH------------HHH-cCCcchHHHHH--------HH
Q 009536 243 WRTMLYIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVI------------ANL-WGESEINKAIE--------EF 300 (532)
Q Consensus 243 wr~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~--------~~ 300 (532)
|||.|++...++++.+++ .+++|++++. ++++.+...... ... ........... -.
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLG 237 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence 999999988777765444 3445655431 111111111100 000 00000000000 00
Q ss_pred HHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CCC--hhHHHHHHHHHHHHHHhh
Q 009536 301 QLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT--DGALASLLVGVTNFAGAL 377 (532)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~ 377 (532)
.....+.+...+....++++++.+....+..+.. ........++.|.+++.. +.+ +++....+..++..++.+
T Consensus 238 ~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~ 313 (495)
T PRK14995 238 LFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTA----MITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGP 313 (495)
T ss_pred HHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHH----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000111111122224567776654433322222 223344556777777653 444 668888888999999999
Q ss_pred hhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccc
Q 009536 378 CASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRG 456 (532)
Q Consensus 378 ~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 456 (532)
+.|++.||+|+|+.+..+..+.+++.+++..... ....+....... ..+++.+. .+.......+..|+++++
T Consensus 314 ~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~--l~G~g~g~~~~~~~~~~~~~~~~~~~g 386 (495)
T PRK14995 314 IAGILVSRLGLRLVATGGMALSALSFYGLAMTDF-----STQQWQAWGLMA--LLGFSAASALLASTSAIMAAAPPEKAA 386 (495)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHHHH--HHHHhHHHHHHHHHHHHHhcCCHHhcc
Confidence 9999999999999888887777776665544211 011122222222 23333333 233455666788999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 457 KIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 457 ~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
.+.++.++.+++|+.+|+.+.|.+.+.
T Consensus 387 ~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 387 AAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998764
No 30
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3.9e-33 Score=274.24 Aligned_cols=385 Identities=18% Similarity=0.128 Sum_probs=257.3
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHH-HHHhh--CCCCChhHHHHHH-----HHHHHHHHHHHHhhhccccccchhH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVS-IAKEL--GFEGNPILEGLVV-----SIFIAGAFVGSISSGSLADKLGCRR 155 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~-----s~~~l~~~~~~~~~G~l~dr~Grr~ 155 (532)
++++.+....++.+.+.++...++.+.|. +.+++ +. ++. .+++. ++.+++..+++++.|+++||+|||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQV--SPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 44566778888999999999998888774 55665 55 444 35553 3455667789999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhhhcHH--------HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHH
Q 009536 156 TFQIDTIPLILGAIISAQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGII 227 (532)
Q Consensus 156 ~l~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 227 (532)
+++.+.++++++++++++++|+. .++++|+++|++.|..++....++.|++|+++|++..+....+..+|.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 5888999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCC--------CCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHH
Q 009536 228 TSLFLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEE 299 (532)
Q Consensus 228 ~g~~~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (532)
++..+...+. ...+ ||+.|++.+++.++........||+|++...+++.+
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~--------------------- 233 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA--------------------- 233 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc---------------------
Confidence 8877655443 2345 999999988876665555555677765432211000
Q ss_pred HHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCChh--HHHHHHHHHHHHHHh
Q 009536 300 FQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDG--ALASLLVGVTNFAGA 376 (532)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~ 376 (532)
+.++.....+.++++++.+.... ...+...........+.+.+++ ..+.+.. .......++..+++.
T Consensus 234 -------~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~ 303 (438)
T PRK09952 234 -------AAKKRIPVIEALLRHPGAFLKII---ALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI 303 (438)
T ss_pred -------cccccCCHHHHHHHchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000111122344443322221 1111112223334445565554 3455433 233444566777888
Q ss_pred hhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcccc
Q 009536 377 LCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTR 455 (532)
Q Consensus 377 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 455 (532)
++.|+++||++||+.+..+.++.+++.+.+..... ............+..+++.+ ..+....+..|.+|++.|
T Consensus 304 ~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r 377 (438)
T PRK09952 304 PCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYR 377 (438)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchh
Confidence 89999999999999888776655444333322110 01111221222222222222 234566788999999999
Q ss_pred chhHHHHHHHHH-HHHHHHHHHHHHHHHhhC--cchhhHhHHHHHHHHHHhhheeecc
Q 009536 456 GKIMGFSFSVHW-VCNFLVGLFFLDLVETFG--VAPVYAGFGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 456 ~~~~g~~~~~~~-~g~~i~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (532)
+++.|+.+.... +++.++|.+.+.+.+..+ |...+...+++.+++.+..+ ..++
T Consensus 378 ~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~~~~ 434 (438)
T PRK09952 378 YSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-LMKD 434 (438)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-Hccc
Confidence 999999766654 899999999999988653 66666666666666655543 3444
No 31
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=5.7e-33 Score=269.15 Aligned_cols=364 Identities=16% Similarity=0.145 Sum_probs=259.0
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
.|+.+..+.++.+..........+.+|.+.+++|+ ++.+.++..+++.++..+++++.|+++||+|||++++.+.++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGI--SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 44555555555555555555666678999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009536 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr 244 (532)
+++.++++++++++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|.+++.+.+..+ ||
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 174 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WR 174 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888 99
Q ss_pred HHHHhhHHHHHHHHHHhc-ccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCc
Q 009536 245 TMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (532)
Q Consensus 245 ~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (532)
+.|++.++++++..+... ..||+|+. +++.....++.+++|.
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~~~-------------------------------------~~~~~~~~~~~l~~~~ 217 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLPGE-------------------------------------PSHQKQNTFRLLQRPG 217 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCcc-------------------------------------cccchhHHHHHhcCHH
Confidence 999998877665544333 34543210 0000112234555555
Q ss_pred chHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHH
Q 009536 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAI 401 (532)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 401 (532)
.+...+...+.... ......+..|.+.++.+.+ ..+......+++.+++.++.+++.||.++ +.+..+..+..+
T Consensus 218 ~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~ 293 (394)
T PRK10213 218 VMAGMIAIFMSFAG---QFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHH
Confidence 54433322222211 1122233346666666655 34677777888999999999999999644 433333333232
Q ss_pred H-HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009536 402 S-MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLD 479 (532)
Q Consensus 402 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 479 (532)
. +++... . .+.+.... ..+..+++.+. .+...+.+.+..|+ +++...++.....++|..+|+.+.|.
T Consensus 294 ~~~~l~~~-~-------~~~~~~~~--~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~ 362 (394)
T PRK10213 294 SALVLTLW-G-------SDKIVATG--VAIIWGLTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGY 362 (394)
T ss_pred HHHHHHHH-h-------hhHHHHHH--HHHHHHHHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 232222 0 11222222 22222333333 34444566677764 46788888888889999999999999
Q ss_pred HHHhhCcchhhHhHHHHHHHHHHh
Q 009536 480 LVETFGVAPVYAGFGGVSLLSALF 503 (532)
Q Consensus 480 l~~~~g~~~~~~~~~~~~~~~~~~ 503 (532)
+.|..|+...+...+++.++..+.
T Consensus 363 l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 363 ALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHhccChhhHHHHHHHHHHHHHHH
Confidence 999999888777766655554443
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.7e-34 Score=280.39 Aligned_cols=388 Identities=17% Similarity=0.133 Sum_probs=273.6
Q ss_pred hhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhh
Q 009536 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (532)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 175 (532)
.+...++...++...|.+.+++|. +..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGL--SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCC--ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 345567778888899999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009536 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (532)
Q Consensus 176 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (532)
|++.++++|+++|++.+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+..+ ||+.|++.+++.+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~ 159 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGI 159 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998888777 9999999888877
Q ss_pred HHHHHhc-ccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHH
Q 009536 256 ILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALF 334 (532)
Q Consensus 256 ~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (532)
+..+..+ +.+|+|+.... .+.++........ ..+...+++++......++.++++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (399)
T TIGR00893 160 IWGVLWLKFIPDPPQKAKW-LTEEEKYIVVGGL-----------LAEQQGKGPSTPKKYQIKELLKDRRVWGLALG---- 223 (399)
T ss_pred HHHHHhhheecCCCCcccc-CCHHHHhhcchhh-----------ccccccccccCCCccchHHHhcCHHHHHHHHH----
Confidence 6655544 34554421100 0000000000000 00000011111223344556666544333322
Q ss_pred HHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhh-hHHHHHHHHHHHHHHh
Q 009536 335 LLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIG-SYLGMAISMLLVVGAT 410 (532)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~~~~~~~~~~~~~ 410 (532)
.+...........+.+.++++ .+.+ +.+.......++.+++.++.|++.||+++|+.... ......++.+......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM 303 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 222333444555566666654 3444 44677777888899999999999999999862111 1111111111111100
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchh
Q 009536 411 SLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPV 489 (532)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~ 489 (532)
... ................+++.+..+....+..|.+|++.|+++.|+.+.+.++|..++|.+.|.+.|..| +...
T Consensus 304 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~ 380 (399)
T TIGR00893 304 FAT---NYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGA 380 (399)
T ss_pred HHh---ccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHH
Confidence 000 001112222222333333444567788899999999999999999999999999999999999999988 8888
Q ss_pred hHhHHHHHHHHHHhhh
Q 009536 490 YAGFGGVSLLSALFAY 505 (532)
Q Consensus 490 ~~~~~~~~~~~~~~~~ 505 (532)
+.+.+++.+++.++.+
T Consensus 381 ~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 381 LMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888777777665543
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=3.1e-33 Score=276.58 Aligned_cols=394 Identities=14% Similarity=0.128 Sum_probs=258.3
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
+|..+...++.......+...++..+|.+.++ |+ +..+.+++.+++.+++.++++++|+++||+|||++++++.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~--s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GF--SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CC--CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 34445555555666666666677788998888 88 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHH-HHHHHhcCCCCCC
Q 009536 165 ILGAIISAQAH----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGI-ITSLFLGIPAEDD 239 (532)
Q Consensus 165 ~~~~~~~~~a~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~ 239 (532)
+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|. +.+++++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99999888763 788899999999999999888888899999999999999999999999886 4555543333223
Q ss_pred cchhHHHHHhhHHHHHHH-HHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcch-hhh
Q 009536 240 PHWWRTMLYIASLPGFIL-ALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ-WSE 317 (532)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 317 (532)
.+ ||+.|++.+++.++. ++..++++|+|+....+.+ ++.. .+. + ++ ....++++.+.+.. .+.
T Consensus 184 ~g-w~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~---~~~------~---~~-~~~~~~~~~~~~~~~~~~ 248 (452)
T PRK11273 184 ND-WHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI-EEYK---NDY------P---DD-YNEKHEQELTAKQIFMQY 248 (452)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh-hhhh---hcc------c---cc-cccccCCCccHHHHHHHH
Confidence 35 999999988777664 4445566777653111100 0000 000 0 00 00000000000111 122
Q ss_pred hhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CCC--hhHHHHHHHHHHHHHHhhhhHhhhhhc--CCchhh
Q 009536 318 LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT--DGALASLLVGVTNFAGALCASYLMDKE--GRQKLL 392 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~ 392 (532)
+++++..+...+...+. .........+.|.++++. +.+ .++.......++.+++.++.|+++||+ +||...
T Consensus 249 ~~~~~~~~~~~l~~~~~----~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~ 324 (452)
T PRK11273 249 VLPNKLLWYIAIANVFV----YLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT 324 (452)
T ss_pred HHcChHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchH
Confidence 44555544433332222 223345566788888763 444 456666677888899999999999998 444332
Q ss_pred h-hhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccCccccchhHHHHHHHHHHHH
Q 009536 393 I-GSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN 470 (532)
Q Consensus 393 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 470 (532)
. ....+..++.+++.... ...... ....++..+... +.......+..|.+|++.+|++.|+.+...++|+
T Consensus 325 ~~~~~~l~~~~~~~~~~~~-------~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 396 (452)
T PRK11273 325 GVFFMTLVTIATIVYWLNP-------AGNPTV-DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGG 396 (452)
T ss_pred HHHHHHHHHHHHHHHHHhc-------ccChHH-HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHH
Confidence 2 11222222222222210 011111 111222222221 2222233456789999999999999999999987
Q ss_pred HH-HHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheee
Q 009536 471 FL-VGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 471 ~i-~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
.+ +|.+.|.+.|..||+..|.+.+++++++.+....+.
T Consensus 397 ~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 397 SVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 65 799999999999999999888887777766554333
No 34
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=5.6e-33 Score=270.21 Aligned_cols=369 Identities=15% Similarity=0.073 Sum_probs=268.7
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.+++..+..+++.+..+......++.+|.+.+++|+ +..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNL--PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 355667777888888888899999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC-Ccch
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-DPHW 242 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~ 242 (532)
.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|+++++..+....+|..++|.+.+.+.. ..+
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g- 160 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE- 160 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 999999999999999999999999999999999999999999999999999999988899999999988877654 445
Q ss_pred hHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCC
Q 009536 243 WRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (532)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
||+.|++.+++.++..+..++ .+.|+. ++.+. +++++ ..+..+ ++
T Consensus 161 w~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~~---------------------------~~~~~----~~~~~~-~~ 205 (394)
T PRK03699 161 WYWVYACIGLVYVAIFILTLF-SEFPAL--GKHAP---------------------------KADKP----VAKEKW-GI 205 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCccc--cccCc---------------------------cccCc----cccccC-Ch
Confidence 999999888777665544332 222210 00000 00000 000000 11
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
. ++...+..+...........+.|.++++ .+.+ +.+.......++..+++++.++++||+++|+.+.....+.
T Consensus 206 ~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~ 281 (394)
T PRK03699 206 G----VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLA 281 (394)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHH
Confidence 1 1222222222223344556678888754 4554 4567777778889999999999999999999887766655
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH-hcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
.+.+.++... .+...... ..+..++ ..+..+.......+..|. .++...|......++|..++|.+.|
T Consensus 282 ~~~~~~~~~~---------~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G 350 (394)
T PRK03699 282 LVLMYLFVNT---------DDPSHLLY-AILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTS 350 (394)
T ss_pred HHHHHHHHHc---------CCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 5544444331 11111222 2222222 222334444555666554 4678889999999999999999999
Q ss_pred HHHHhhCcchhhHhHHHHHHHHHHhhh
Q 009536 479 DLVETFGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
.+.+..|++..+++.+++.+++.+.+.
T Consensus 351 ~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 351 PIVAHFGLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHHHhCchhhhhhhHHHHHHHHHHHH
Confidence 999999999998888777777655443
No 35
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=7.2e-33 Score=268.24 Aligned_cols=368 Identities=12% Similarity=0.112 Sum_probs=261.7
Q ss_pred HHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
.+..+++..+..+.......+.+|.+.+|+|. +..+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGI--SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCC--CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 35667777888888888999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009536 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (532)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f 247 (532)
.+++++++|++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++.+++.+.+..+ ||+.|
T Consensus 82 ~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f 160 (382)
T PRK10091 82 NAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTF 160 (382)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHH
Confidence 99999999999999999999999999888888999999999999999999999999999999999998888777 99999
Q ss_pred HhhHHHHHHHHHH-hcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchH
Q 009536 248 YIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (532)
Q Consensus 248 ~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (532)
++.+++.++..+. ..++||.++ +.+. . .+.. .+.++++..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~~~----~~~~--------------~------------------~~~~-~~~~~~~~~~~ 203 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDIRD----EAKG--------------G------------------LREQ-FHFLRSPAPWL 203 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc----cccc--------------C------------------HHHH-HHHhcChHHHH
Confidence 9988877665443 344565431 0000 0 0000 11233333322
Q ss_pred HHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHH
Q 009536 327 AFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISM 403 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 403 (532)
.+.... + ..........+.+.++. ..+.+ ..+.......++.++++++.+++.||+++|+.+..+..+.+++.
T Consensus 204 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 204 IFAATM---F-GNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHH---H-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHH
Confidence 222111 1 11112222233333443 34554 45677778889999999999999999999999888877777766
Q ss_pred HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 404 LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
+++.... ...+..+...++...+......+.......+..+++.++.+ ..+...++|.++||.+.|.+.|.
T Consensus 280 ~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 280 LMLFFFG-------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred HHHHHHH-------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc
Confidence 5543311 11122222222222222211222222334444444444443 44677899999999999999996
Q ss_pred -hCcchhhHhHHHHHHHHHHhhheee
Q 009536 484 -FGVAPVYAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 484 -~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
.+|+..+.+.++++++.......+.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 351 GLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 5788888877666655554443333
No 36
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=2.7e-32 Score=264.35 Aligned_cols=360 Identities=15% Similarity=0.124 Sum_probs=264.4
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 166 (532)
+.++.+.++.++.........+.+|.+.+++|. +..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHL--PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347777788889999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009536 167 GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (532)
Q Consensus 167 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~ 246 (532)
+.+++++++|++.++++|+++|++.+...+.....+.+..++++|+++++++..+.++|..+|+.+++.+.+... |...
T Consensus 84 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~ 162 (381)
T PRK03633 84 GCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM-SVLP 162 (381)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-chHH
Confidence 999999999999999999999999999999888888899999999999999999999999999999998876532 3222
Q ss_pred HHhhHHHHHH-HHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcch
Q 009536 247 LYIASLPGFI-LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSR 325 (532)
Q Consensus 247 f~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (532)
+ ..+..... ..+.....+++++ ++ +...+.++.++++..+
T Consensus 163 ~-~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~--~~~~~~~~~~~~~~~~ 203 (381)
T PRK03633 163 W-VTGLVLAAILPLLFTRILNQQA------------------------------------EN--HDSTSIWPMLKLRQAR 203 (381)
T ss_pred H-HHHHHHHHHHHHHHhcccCCCC------------------------------------CC--CCCCCHHHHHHhcchH
Confidence 2 22222211 1111111111100 00 0012234455666544
Q ss_pred HHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHH
Q 009536 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISM 403 (532)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 403 (532)
......... .........+.|.+.++.+.+ ..+.......++.+++++..|++.||+++|+.+..+..+..++.
T Consensus 204 ~~~~~~~~~----~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~ 279 (381)
T PRK03633 204 LGVNGCIIS----GIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGS 279 (381)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 322211111 112233445677777776665 34566667778899999999999999999998887777666655
Q ss_pred HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 404 LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
..+.. . ........+... ...+..|.....+.|..|+++++...+..+...++|..++|.+.|.+.|+
T Consensus 280 ~~~~~----------~-~~~~~~~~l~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~ 347 (381)
T PRK03633 280 IAMLS----------Q-AAMAPALFILGA-AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN 347 (381)
T ss_pred HHHhh----------h-HHHHHHHHHHHH-HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43321 1 111111122221 22234566667778888888888888888888999999999999999999
Q ss_pred hCcchhhHhHHHHHHHHHHhh
Q 009536 484 FGVAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~ 504 (532)
.|+...|.+.+.+.++..+..
T Consensus 348 ~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 348 YSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred hCccHHHHHHHHHHHHHHHHH
Confidence 999988888777776655443
No 37
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=3.2e-34 Score=281.48 Aligned_cols=383 Identities=15% Similarity=0.085 Sum_probs=282.0
Q ss_pred HHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (532)
+.+..++..+......+.+|.+.++++. ++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTG--STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHH
Confidence 3334555666677778889999999987 88999999999999999999999999999999999999988888776655
Q ss_pred Hh-----hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009536 172 AQ-----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (532)
Q Consensus 172 ~~-----a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~ 246 (532)
+. .++++.+++.|+++|++.+...+...+++.|++|+++|+++.++...+..+|..+||.+++.+.+..+ |++.
T Consensus 100 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~ 178 (417)
T PRK10489 100 ALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWN 178 (417)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHH
Confidence 42 56789999999999999998889999999999999999999999999999999999999999887777 9999
Q ss_pred HHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchH
Q 009536 247 LYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (532)
Q Consensus 247 f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (532)
|++.++..++..+..+.+|++++.. +++ ++ . .+ +....++.+++++..+.
T Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~~--~~~-~~------------~----~~-----------~~~~~~~~~~~~~~~~~ 228 (417)
T PRK10489 179 YGLAAAGTFITLLPLLRLPALPPPP--QPR-EH------------P----LR-----------SLLAGFRFLLASPVVGG 228 (417)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCC--ccc-cc------------c----hH-----------HHHHHHHHHHcChHHHH
Confidence 9988887777666666666653210 000 00 0 00 00112334455554443
Q ss_pred HHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHH
Q 009536 327 AFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISM 403 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 403 (532)
.++....... ......+.|.+.++ .+.+ ..++......++.+++.++.+++.||.++++.+..+..+.+++.
T Consensus 229 ~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~ 303 (417)
T PRK10489 229 IALLGGLLTM-----ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAV 303 (417)
T ss_pred HHHHHHHHHH-----HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHH
Confidence 3332222111 22344456667666 4544 45677777888999999999999999777777777776666665
Q ss_pred HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 404 LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 482 (532)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 482 (532)
+++... . .........+..+++.+. .+...+++.|..|++.||+++|+.+...++|..++|.+.|.+.+
T Consensus 304 ~~~~~~---------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 304 GLFGLM---------P-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred HHHHcc---------c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 554431 1 222222233333333333 34555778899999999999999999999999999999999999
Q ss_pred hhCcchhhHhHHHHHHHHHHhhheeeccCCCCCHHHHHHH
Q 009536 483 TFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIEMS 522 (532)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (532)
..|+...+...+++.++..++.+...++.|+++++|.+++
T Consensus 374 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 374 MMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 9998888888888777777777677788777666655443
No 38
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-35 Score=265.81 Aligned_cols=377 Identities=15% Similarity=0.115 Sum_probs=263.4
Q ss_pred CCCCchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHH
Q 009536 80 LGWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI 159 (532)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~ 159 (532)
..+...+..+.++++...++..+...+..+++.+++.||+ +++..|++.+.+.+.+.+++|+.|+|+|||.||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni--~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNI--SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCC--CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 4455667789999999999999999999999999999999 88888999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 160 DTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 160 ~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
|..+|.++.++++++..||++.++|.+.|+|.+...++++.+++|.+|.++|++++++++.+..+|..+|.+++..+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhh
Q 009536 240 PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (532)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
.++|||.|++.+++++++.++.+++.++|+.- ..++.. +++. ............+.+.
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg----a~~~~~-------~~~~-----------~~~~~ts~~kDl~~l~ 241 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERG----ARDEVD-------GENK-----------MVKPFTSVWKDLKVLA 241 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcccc----cccccc-------cCCc-----------CCCCccchHHHHHHHH
Confidence 88899999999999999887777766666410 000000 0000 0000111112223334
Q ss_pred cCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHH--HcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCc----hhhh
Q 009536 320 EEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ--DVGITDGALASLLVGVTNFAGALCASYLMDKEGRQ----KLLI 393 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~~~ 393 (532)
+++.+....+......+.....-++.+.+.+...+ +...+...+...+...++.+|.+++|.++||+.++ ....
T Consensus 242 ~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~ 321 (493)
T KOG1330|consen 242 KIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLR 321 (493)
T ss_pred ccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchh
Confidence 43443333333333333222222222222222222 22333556777778899999999999999994321 1222
Q ss_pred hhHHHHH----HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHH
Q 009536 394 GSYLGMA----ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVC 469 (532)
Q Consensus 394 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 469 (532)
...+..+ .+...+...+... .......+.+++++............-+..|++|+++|.+++++...+..+.
T Consensus 322 ~~q~~~~~g~~~s~~~L~~~~~~~----~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~f 397 (493)
T KOG1330|consen 322 ASQLSAALGAPLSIPFLFLFPAFT----SSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIF 397 (493)
T ss_pred HHHHHHhhhhhHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHh
Confidence 2222111 1111222211111 1222222222222222333333455567789999999999999988887766
Q ss_pred HHH-HHHHHHHHHHhh
Q 009536 470 NFL-VGLFFLDLVETF 484 (532)
Q Consensus 470 ~~i-~~~~~g~l~~~~ 484 (532)
+-. +|.+.|.+.|+.
T Consensus 398 gd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 398 GDAASPYIVGILSDKL 413 (493)
T ss_pred ccCCCcceehhHHHHh
Confidence 555 455999998875
No 39
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=4.4e-33 Score=276.24 Aligned_cols=377 Identities=15% Similarity=0.103 Sum_probs=242.7
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 166 (532)
+.+....+..+...+......+.+|.+.+++|+ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNL--TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 344455555566666666778889999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC----C----
Q 009536 167 GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE----D---- 238 (532)
Q Consensus 167 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----~---- 238 (532)
+.++++++++++.++++|+++|++.+... ....++.|++|+++|++++++...+..+|..+++.+.+.+. .
T Consensus 114 ~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 114 AVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999987654 45668899999999999999998777777666655543321 1
Q ss_pred -CcchhHHHHHhhHHHHHHHHHHhcccccC-hhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhh
Q 009536 239 -DPHWWRTMLYIASLPGFILALGMQFTVES-PRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWS 316 (532)
Q Consensus 239 -~~~~wr~~f~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (532)
..+ ||+.|++.+++.++..+..++++++ |+ ++.++.. ...+.++......++
T Consensus 193 ~~~g-Wr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~--------------------~~~~~~~~~~~~~~~ 246 (476)
T PLN00028 193 SFTA-WRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK--------------------KSGTMPKDSFSKVLR 246 (476)
T ss_pred chhh-hHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH--------------------hcCccccccHHHHHH
Confidence 235 9999999998888776666555543 31 0000000 000000001112334
Q ss_pred hhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCch---
Q 009536 317 ELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQK--- 390 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--- 390 (532)
+.++++..+...+..... +........+.|.++.+ .+.+ +++....+..++.++++++.|+++||++||+
T Consensus 247 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~ 322 (476)
T PLN00028 247 YGVTNYRTWILALTYGYS----FGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR 322 (476)
T ss_pred HHHcCchhHHHHHHHHHH----HHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc
Confidence 455565544433322221 11222334455555543 4665 4567777888999999999999999998652
Q ss_pred ----hhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHH
Q 009536 391 ----LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVH 466 (532)
Q Consensus 391 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 466 (532)
.......+.++..+++.. . .+........+++..+... ..+..+.+..+.. ++.+|++.|+.+...
T Consensus 323 ~r~~~~~~~~~l~~i~~~~~~~---~-----~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~-~~~~g~~~g~~~~~g 392 (476)
T PLN00028 323 GRLWALWIVQTLGGVFCIWLGR---A-----NSLGAAIVVMILFSIFVQA-ACGATFGIVPFVS-RRSLGVISGLTGAGG 392 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHhcc---c-----chHHHHHHHHHHHHHHHHH-hhhhhcccCcccC-hhhchhhhhhhhccc
Confidence 111111111111111111 0 1111112222222222211 2223445556654 467999999988877
Q ss_pred HHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhhee
Q 009536 467 WVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 507 (532)
Q Consensus 467 ~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
++|+.+++.+.+ ..+..+|...|.+.+++.+++.++.++.
T Consensus 393 ~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 393 NVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred cHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 777777776654 1123358888888887777776665444
No 40
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=3e-32 Score=267.47 Aligned_cols=372 Identities=19% Similarity=0.221 Sum_probs=264.5
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCCh---hHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNP---ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 165 (532)
...+.++.++..+......+.+|.+.+++|.+... ...|++.+++.++..++++++|+++||+|||+++..+.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 45556677778888888999999999999984222 235899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009536 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (532)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~ 245 (532)
++.+++.++++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.+++|.+++.+.+..+ ||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~ 173 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRP 173 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHH
Confidence 999999999999999999999999865 567778889999999999999999999999999999999999888777 999
Q ss_pred HHHhhHHHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcc
Q 009536 246 MLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHS 324 (532)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (532)
.|++.+++.++..+..++ .+|+++.. + +.+ ..+ .....+.+++++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~------------------~~~------------~~~~~~~~~~~~~ 220 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPV-S--KKE------------------MLH------------MREVVTSLKNPKL 220 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccc-c--chh------------------hhH------------HHHHHHhCcCCch
Confidence 999988877766554433 44432100 0 000 000 0011122344443
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--h----hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHH
Q 009536 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--D----GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLG 398 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 398 (532)
...+....+.. .........+.+.+..+.+.. + .+......+++.+++.+..|++.||++||+.+..+..+
T Consensus 221 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 297 (408)
T PRK09874 221 VLSLFVTTLII---QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIF 297 (408)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH
Confidence 32222111111 112222333444444443221 1 13334455677788888999999999999998887776
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHH
Q 009536 399 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 477 (532)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 477 (532)
.+++.+.+... ...+. .....+..+.+.+ ..+.......+..|++.+|+.+++.+.+..+|..++|.+.
T Consensus 298 ~~~~~~~~~~~---------~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~ 367 (408)
T PRK09874 298 SVLLLIPMSFV---------QTPLQ-LGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMG 367 (408)
T ss_pred HHHHHHHHHHh---------ccHHH-HHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHH
Confidence 66655544431 11222 2222222222222 3455556667778889999999999999999999999999
Q ss_pred HHHHHhhCcchhhHhHHHHHHHHHHhhheee
Q 009536 478 LDLVETFGVAPVYAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 478 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
|.+.+..||+..|.+.+++.+++.++.+...
T Consensus 368 G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 368 AAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888888777665443
No 41
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.2e-32 Score=267.63 Aligned_cols=375 Identities=15% Similarity=0.096 Sum_probs=266.7
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
++++...+.+.+..++..+....+.+.+|.+.+++|. +..+.++..+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNA--GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 4556667777777888888899999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcch
Q 009536 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (532)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 242 (532)
+.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|.++.++......+|..++|.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~- 165 (406)
T PRK15402 87 FFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP- 165 (406)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-
Confidence 9999999999999999999999999999998889999999999999999999999988888999999999998888777
Q ss_pred hHHHHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcC
Q 009536 243 WRTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (532)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
||+.|++.++..++..+.. ...||+++... +. .. . ++....++.++++
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------~~---~-----------~~~~~~~~~~~~~ 214 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVG---EK--------------LS---L-----------KELGRDYKLVLKN 214 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCcccc---cc--------------cc---H-----------HHHHHHHHHHHcC
Confidence 9999999888877665543 34555432100 00 00 0 0011234456666
Q ss_pred CcchHHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHH
Q 009536 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLG 398 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 398 (532)
+..+.......+... .......+.|.++. ..+.+. .+.......++.+++.++.+++.||+++|+.+..+..+
T Consensus 215 ~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~ 290 (406)
T PRK15402 215 RRFVAGALALGLVSL----PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWP 290 (406)
T ss_pred cHHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 655443333222211 12223334455543 345553 35555556678889999999999999999998888777
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 399 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
..++..++....... .....+......+...+.+.. .+........ .+++++|++.++.+....++..+|+.+.+
T Consensus 291 ~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~g~g~~~~-~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 291 MVAGLLLAALATVIS---SHAYLWLTAGLSLYAFGIGLA-NAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred HHHHHHHHHHHHHcc---cccHHHHHHHHHHHHHHHHHH-hhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766665532111 011111222222222222221 2322233322 34478999999999999999999999999
Q ss_pred HHHHhhCcchhhHhHHHHHHHH
Q 009536 479 DLVETFGVAPVYAGFGGVSLLS 500 (532)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~ 500 (532)
.+++..+........++..++.
T Consensus 366 ~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 366 HAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred hcccCCchHHHHHHHHHHHHHH
Confidence 9988877544433333333333
No 42
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-34 Score=258.34 Aligned_cols=430 Identities=22% Similarity=0.278 Sum_probs=304.9
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCC-C-----CChhHHHHHHHHHHHHHHHHHHhhhccccccchhHH
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGF-E-----GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~ 156 (532)
++..+.+.+..++.|.+.++...++.+.+.+...+.- + .++...+.+..+-.+|.++||+++|+++||+|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 4567778889999999999999999999988776632 1 245567889999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhhh-------cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHH
Q 009536 157 FQIDTIPLILGAIISAQAH-------SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITS 229 (532)
Q Consensus 157 l~~~~~~~~~~~~~~~~a~-------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 229 (532)
+...++++.+++++++++. -..++...|++.|+|.|+-+|...++.+|...++.||...+.+.+..+.|...|
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999888752 256788899999999999999999999999999999998888877777777666
Q ss_pred HHhcCCCC----CC----------cchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCCh-hHHHHHHHHHcCCcchH
Q 009536 230 LFLGIPAE----DD----------PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGML-NDAKAVIANLWGESEIN 294 (532)
Q Consensus 230 ~~~~~~l~----~~----------~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 294 (532)
.+++-.+. .. .+-||..|.+.++++++.....+.+||+++|.....+. +.+. .+..+.....
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~~~~ 273 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDMKKVLSVD 273 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hccccccccc
Confidence 65553322 11 11299999999999999999999999999886332221 1211 1111111110
Q ss_pred HHHHHHHHHHHhccCCCcch---hhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh----------
Q 009536 295 KAIEEFQLVIKKDGSDLDSQ---WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG---------- 361 (532)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 361 (532)
.++... .....+..+.. +...+..... +.++..+..++..-...+....+...++++.+....
T Consensus 274 --~~~~~~-~~~~~~~~~~~~~~F~~~f~~~hg-~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~v 349 (538)
T KOG0252|consen 274 --IEAEST-AESDVPPPSNSFGLFSRLFLRWHG-KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKV 349 (538)
T ss_pred --cchhhc-cccCCCCcccccchHHHHHHHHHH-HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHH
Confidence 000000 00111111111 2222222211 233444455555555566666677777775544311
Q ss_pred HHHHHHHH-HHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccc
Q 009536 362 ALASLLVG-VTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGP 440 (532)
Q Consensus 362 ~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (532)
.....+.. .+.+.|..+...++|++||++..+.+++++.+.++.+...+... .......+...+..+....|.+.
T Consensus 350 A~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~----~~~~Gf~v~y~l~~ff~NFGPn~ 425 (538)
T KOG0252|consen 350 AEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQL----ENTIGFVVLYSLTFFFGNFGPNA 425 (538)
T ss_pred HHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccc----cccCceeehHHHHHHHHhcCCCc
Confidence 11122222 33344677788899999999999999999988888777643311 11111222223333444456667
Q ss_pred ccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH-----hhCcchhhHhHHHHHHHHHHhhheeeccCCCCC
Q 009536 441 VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE-----TFGVAPVYAGFGGVSLLSALFAYYFIVETKGRS 515 (532)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (532)
....+.+|.+|++.|++..|+....+-.|++++...+.++.+ ..|.+.++++++++++++.+.. ++.||++++.
T Consensus 426 ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~~~ 504 (538)
T KOG0252|consen 426 TTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKGKS 504 (538)
T ss_pred eeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeecccccC
Confidence 778889999999999999999999999999999999999999 7889999999999998888766 5667999999
Q ss_pred HHHHHHHhc
Q 009536 516 LEEIEMSLN 524 (532)
Q Consensus 516 ~~~~~~~~~ 524 (532)
++|++.+.+
T Consensus 505 leei~~e~~ 513 (538)
T KOG0252|consen 505 LEEISNEEE 513 (538)
T ss_pred HHHhcChhh
Confidence 988865544
No 43
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.7e-32 Score=268.60 Aligned_cols=381 Identities=19% Similarity=0.275 Sum_probs=264.3
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
.+++.+....+..+..+++.....+..|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGL--DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCC--CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 345566666677778888888888899999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+ |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~ 170 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-W 170 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988877 9
Q ss_pred HHHHHhhHHHHHH-HHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCC
Q 009536 244 RTMLYIASLPGFI-LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (532)
Q Consensus 244 r~~f~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
|+.|++.++..++ ..+...+++|++++..++ +.++..+..++.......+.+. ... ..+.+.+..+...+.+++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS-ALP-EQKATQGTKRSVFKALFQGK 247 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc-ccc-ccccccchhhHHHHHHhcch
Confidence 9999988655544 444556677777654443 2222222222211100000000 000 00000001111122233333
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMA 400 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 400 (532)
..+..... .+..+...........+.|.+.++.+.+ ..+.......++.+++.++.+++.||+++|+.... ..+..
T Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 325 (398)
T TIGR00895 248 TARITVLL-WLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALL-LLLGA 325 (398)
T ss_pred hHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH-HHHHH
Confidence 22222222 2222223334445556667666666655 44667777888999999999999999999844433 33333
Q ss_pred HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 009536 401 ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 480 (532)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 480 (532)
+...++.... .+........++...+ ..+..+...++..|.+|++.|+++.|+.+.+.++|..++|.+.|.+
T Consensus 326 ~~~~~~~~~~-------~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 326 VFAVLVGSTL-------FSPTLLLLLGAIAGFF-VNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHh-------hCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3322222210 1112222222222222 2223466678889999999999999999999999999999999865
No 44
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=4.5e-32 Score=270.82 Aligned_cols=383 Identities=15% Similarity=0.181 Sum_probs=270.2
Q ss_pred HHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
.+++++++.++..++...+++.+|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGE--SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 46677788888899999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009536 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (532)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f 247 (532)
.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+ ||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988887 99999
Q ss_pred HhhHHHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHH---------HHcCCcc---hHHHHHH--------H-HHHHH
Q 009536 248 YIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIA---------NLWGESE---INKAIEE--------F-QLVIK 305 (532)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~--------~-~~~~~ 305 (532)
++.....++..+.... .++.+. .+.+.+....... ...+... ....... . ....+
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLH 244 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9987776665544433 333221 1111121111000 0000000 0000000 0 00001
Q ss_pred hccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhh
Q 009536 306 KDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYL 382 (532)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l 382 (532)
+..........++++++.++..+...++..+ .......+.|.+++. .+.+ ..++......++.+++.++.+++
T Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 320 (471)
T PRK10504 245 ARNNNRALFSLKLFRTRTFSLGLAGSFAGRI----GSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQV 320 (471)
T ss_pred HhcCCCCccCHHHhcccchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111112246777766554433333322 233445566666653 4554 44666677778888888999999
Q ss_pred hhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHH
Q 009536 383 MDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGF 461 (532)
Q Consensus 383 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~ 461 (532)
.||+++|+.+..+..+.++...++.+... ..+........+..+.+.+ ..+.......+..|++.++.++|+
T Consensus 321 ~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 393 (471)
T PRK10504 321 VNRFGYRRVLVATTLGLALVSLLFMLVAL-------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSL 393 (471)
T ss_pred HHHcCchHHHHHHHHHHHHHHHHHHhccc-------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHH
Confidence 99999999998888877776665544211 1111111111222222222 223445667788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcc
Q 009536 462 SFSVHWVCNFLVGLFFLDLVETFGVA 487 (532)
Q Consensus 462 ~~~~~~~g~~i~~~~~g~l~~~~g~~ 487 (532)
.++...+|..+|+.+.|.+.+..|+.
T Consensus 394 ~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 394 LSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999887763
No 45
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=5.6e-33 Score=274.07 Aligned_cols=390 Identities=14% Similarity=0.106 Sum_probs=261.7
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
+|.++....+...........++..+|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~--s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQA--TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCc--chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 46666666666555555556678889999999999 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHH-HHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 165 ILGAIISAQAHSLDEMLW-GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
+++.++++++++++.+++ .|+++|++.+...+....++.++++ ++|+++.++.+.+..+|..++|.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-w 172 (455)
T TIGR00892 95 SLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-W 172 (455)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-h
Confidence 999999999999998875 5799999998877777888899996 679999999999999999999999998888777 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCc
Q 009536 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (532)
|+.|++.+++.++..+..+++.+.+.... +.+.++ . ........ .++. ... ...++..+....++++++.
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~---~~~~~~~~-~~~~-~~~---~~~~~~~~~~~~~~~~~~~ 242 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQR-VSKSKS-K---EGLPPDGS-TKKL-SKK---STAEKINRFLDFSLFTHRG 242 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccc-cccccc-c---ccCCCCCc-cccc-ccc---chhhhhhhhcchHHhcCch
Confidence 99999998887765554444333221000 000000 0 00000000 0000 000 0000000001123556665
Q ss_pred chHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhc--CCchhhhhhH--H
Q 009536 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKE--GRQKLLIGSY--L 397 (532)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~--~ 397 (532)
++.......+. .........+++.+.++.+.+ ..+....+.+++.++++++.|++.||. ++++...++. .
T Consensus 243 ~~~~~~~~~l~----~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 318 (455)
T TIGR00892 243 FLVYLSGNVIM----FLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL 318 (455)
T ss_pred HHHHHHHHHHH----HHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH
Confidence 44333322222 222334445666666766665 456777778888999999999999973 3343333322 2
Q ss_pred HHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHH
Q 009536 398 GMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLF 476 (532)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~ 476 (532)
+.+++.+++.. ..+...+.. ..+..+++.+ ..+....++.|.+|++++++++|+.+...++|.+++|.+
T Consensus 319 ~~~l~~ll~~~---------~~~~~~~~i-~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i 388 (455)
T TIGR00892 319 FNGLTHLLCAL---------AGDYTGLVI-YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPL 388 (455)
T ss_pred HHHHHHHHHHH---------hchHHHHHH-HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccc
Confidence 22222222222 112222222 2222233333 345566778888999999999999999999999999999
Q ss_pred HHHHHHhhC-cchhhHhHHHHHHHHHH
Q 009536 477 FLDLVETFG-VAPVYAGFGGVSLLSAL 502 (532)
Q Consensus 477 ~g~l~~~~g-~~~~~~~~~~~~~~~~~ 502 (532)
.|.+.+..| |...|++.+++.+++.+
T Consensus 389 ~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 389 AGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999875 88888887776666554
No 46
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.6e-32 Score=273.37 Aligned_cols=393 Identities=15% Similarity=0.114 Sum_probs=272.6
Q ss_pred CCchHHHHHHHHHHhhhhhhccccccchhHHHHH----------------------hhCCCCChhHHHHHHHHHHHHHHH
Q 009536 82 WLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAK----------------------ELGFEGNPILEGLVVSIFIAGAFV 139 (532)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~s~~~l~~~~ 139 (532)
...+|.+..+++++..+...++..++.+.+.+.+ |+++ +..+.|++.+++.+++.+
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKW--SGALQGLILSSHFYGQII 91 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCC--CHHHhhHHHHHHHHHHHH
Confidence 3457788888888888889999999888888876 7778 899999999999999999
Q ss_pred HHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh--hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhH
Q 009536 140 GSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTL 217 (532)
Q Consensus 140 ~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~ 217 (532)
++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999999999999999999999887654 5688899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCc-chhHHHHHhhHHHHHHHHHHhccc-ccChhHHhhcCChhHHHHHHHHHcCCcchHH
Q 009536 218 CQVGTCLGIITSLFLGIPAEDDP-HWWRTMLYIASLPGFILALGMQFT-VESPRWLCKGGMLNDAKAVIANLWGESEINK 295 (532)
Q Consensus 218 ~~~~~~~g~~~g~~~~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (532)
...+..+|.++++++++.+.+.. + ||+.|++.++++++..+.++++ +|+|+... +.+.++.
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~--------------- 234 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFEK--------------- 234 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHHH---------------
Confidence 99999999999999999988774 6 9999999998888776665554 45553110 0000000
Q ss_pred HHHHHHHHHH--hccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHH
Q 009536 296 AIEEFQLVIK--KDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGV 370 (532)
Q Consensus 296 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~ 370 (532)
+..+...+ +.+.+.+..++++++++..+... +..+........+..++|.++++ .+.+ +.++...+..+
T Consensus 235 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~ 308 (465)
T TIGR00894 235 --KYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIW----FAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308 (465)
T ss_pred --HHHHhhcccccCCCCCCCCHHHHhcCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence 00000000 00111223466677666544333 33333344455666778887765 3444 55777777888
Q ss_pred HHHHHhhhhHhhhhhcCCchhh--------hhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccc
Q 009536 371 TNFAGALCASYLMDKEGRQKLL--------IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVT 442 (532)
Q Consensus 371 ~~~~~~~~~g~l~d~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (532)
+.+++.++.|+++||+++|+.. ..+......+..++.... . .......+..+.+......+..+..
T Consensus 309 ~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~l~~~~~~~~~~~~ 382 (465)
T TIGR00894 309 FAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY-L-----SAAFYLTIIILTLANAVSSGPLAGV 382 (465)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-c-----CCchHHHHHHHHHHHHHhhhhhhhh
Confidence 9999999999999997654321 111111111111111110 0 0111111211222222222222333
Q ss_pred ccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh--C-cchhhHhHHHHHHHHHHhhhe
Q 009536 443 GLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF--G-VAPVYAGFGGVSLLSALFAYY 506 (532)
Q Consensus 443 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~ 506 (532)
.....|..|. .+|.+.|+.+....+++.++|.+.|.+.+.. + |...|.+.+++.+++.++..+
T Consensus 383 ~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 383 LINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 3444566665 7999999999999999999999999887653 3 677788877777777665543
No 47
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=2e-31 Score=259.83 Aligned_cols=375 Identities=16% Similarity=0.091 Sum_probs=252.7
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
+....++.++.........+.++.+.+|+|. +..+.|++.+.+.++..+++++.|+++||+|||+++..+.++++++.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGL--SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCC--CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4445555555555555555667777789998 89999999999999999999999999999999999999999999887
Q ss_pred HHHH---h-hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHH-HHHHHhcCCCCCCcchh
Q 009536 169 IISA---Q-AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGI-ITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 169 ~~~~---~-a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~~w 243 (532)
+++. + .++++.+++.|+++|++.+...+....++.+++|+++|++++|+.+.+.++|. ++++.+++.+.+..+ |
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~ 171 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-E 171 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-h
Confidence 7653 3 35788899999999999988888888889999999999999999999999997 689999988887777 6
Q ss_pred HHHHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCC
Q 009536 244 RTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
+..+|......++..+.. ++.++.++.. ++++++ +.++....++.++++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------------------------~~~~~~~~~~~~~~~~ 222 (402)
T TIGR00897 172 MNTLWSALAFVLTGGVIALFSNKDIFTPQ-HMQTRE----------------------------KFSELGKAATILFTNP 222 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCcc-cccCCc----------------------------chhhHHHHHHHHHcCh
Confidence 666555444333333222 2233321100 000000 0000011234566666
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhh-hhHHHH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLI-GSYLGM 399 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~ 399 (532)
..+...+... ...........+.|.+.++.+.+ +.+.......++.+++.+..|+++||++||+... .+....
T Consensus 223 ~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~ 298 (402)
T TIGR00897 223 NVLLGGMVRI----INTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGC 298 (402)
T ss_pred hHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Confidence 6544333222 22233445566778888777665 3355556678899999999999999999888653 233333
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLD 479 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 479 (532)
+++.+.+....... ............+...+.+ +..+. .....|.. +++|+++.|+.+...+++..++|.+.|.
T Consensus 299 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~G~~~~-~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~ 372 (402)
T TIGR00897 299 GIFTLALYYIPQHF---GHSFAVALIIAIALGIFLA-GYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVL 372 (402)
T ss_pred HHHHHHHHHHHHcc---CCcHHHHHHHHHHHHHHHH-HHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333332211100 0111111122222222222 22232 34455654 4579999999999999999999999999
Q ss_pred HHHhhCcchhhHhHHHHHHHHHHhhh
Q 009536 480 LVETFGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 480 l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
+.+..|+...+++.+++.+++.++..
T Consensus 373 l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 373 FIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888777766554
No 48
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.5e-31 Score=267.06 Aligned_cols=408 Identities=21% Similarity=0.192 Sum_probs=291.8
Q ss_pred hhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhc
Q 009536 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS 176 (532)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~ 176 (532)
..........++..+ .+.+.. +.....+..+++++|..+|++++|+++||+|||++++.++++..++.++.++++|
T Consensus 95 ~~~~~~~~~~s~~~~--~~~~c~--~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~ 170 (521)
T KOG0255|consen 95 WVYDYGSSVYSIVSE--WNLVCD--SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN 170 (521)
T ss_pred eEecCCCCcccccch--hceeeC--cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 333333444444433 344444 7778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHH
Q 009536 177 LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (532)
Q Consensus 177 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~ 256 (532)
++.++++|+++|++.++.......++.|++++++|+.+..+ ......+..+++..++++.. + ||+.+++..++.++
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~-Wr~~~~~~~~~~~~ 246 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D-WRWLFWIISIPSGL 246 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h-HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 66777777777777777766 4 99999999999998
Q ss_pred HHHHhcccccChhHHhhcCChhHHHHHHHHHcCCc---chH-HHHHHH--HHHHHhccCCCcchhhhhhcCCcchHHHHH
Q 009536 257 LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGES---EIN-KAIEEF--QLVIKKDGSDLDSQWSELLEEPHSRVAFIG 330 (532)
Q Consensus 257 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (532)
.++..++.+|+|+|+..+++.+++.+.+++....+ ... ...... ....+....+....+.++++.+..+...+.
T Consensus 247 ~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 326 (521)
T KOG0255|consen 247 FLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLY 326 (521)
T ss_pred HHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHH
Confidence 88887777799999999999999999988875432 111 111111 111111122223457778887755544444
Q ss_pred HHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHh
Q 009536 331 GALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 410 (532)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (532)
..+..+. .....+-+.....+.+.+ ........+.....+....+...|++|||.....+..+..++++...+..
T Consensus 327 ~~~~~~~----~~~~y~gl~~~~~~lg~~-~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~ 401 (521)
T KOG0255|consen 327 LLFIWFV----FSLVYYGLSLNVSGLGGN-IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLP 401 (521)
T ss_pred HHHHHHH----HhHHHHhhhhhhhhcCch-HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333321 111222222222333333 34455555567777788889999999999999999999999988888754
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhh
Q 009536 411 SLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVY 490 (532)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~ 490 (532)
... ..+.......+..++.+.+.. ..+.+..|++|+..|..+.+..+....++.+++|.+.-.... ......+
T Consensus 402 ~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~ 474 (521)
T KOG0255|consen 402 DDL-----GGWLHWILPLLGKFFIGSAFN-LIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGL 474 (521)
T ss_pred ccc-----hhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchH
Confidence 321 111222222222333333333 347889999999999999999999999999999988765444 3333333
Q ss_pred HhHHHHHHHHHHhhheeeccCCCCCHHHHHHHhc
Q 009536 491 AGFGGVSLLSALFAYYFIVETKGRSLEEIEMSLN 524 (532)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (532)
.+++....+.+++...++||++.+.+.+..++.+
T Consensus 475 ~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 475 ILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 3456667777777778899999888765544443
No 49
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=5e-32 Score=272.16 Aligned_cols=383 Identities=18% Similarity=0.164 Sum_probs=272.6
Q ss_pred HHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
.+..++++.++..++....++.+|.+.+++|. +..+.+|+.+.+.++..++.++.|+++||+|||++++++.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGS--SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 46677788889999999999999999999999 8889999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009536 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (532)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f 247 (532)
.+++++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++.+ ||+.|
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f 159 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIF 159 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888 99999
Q ss_pred HhhHHHHHHHHHHhc-ccccChhHHhhcCChhHHHHHH--------H-H-HcCCc-c---hHHHHHH--------HHHHH
Q 009536 248 YIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVI--------A-N-LWGES-E---INKAIEE--------FQLVI 304 (532)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~--------~-~-~~~~~-~---~~~~~~~--------~~~~~ 304 (532)
++.++++++..+..+ +++++++. .+++.+...... . . ..+.. + ....... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVV 237 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 998887776554443 34543321 111111111000 0 0 00000 0 0000000 00000
Q ss_pred HhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CCC--hhHHHHHHHHHHHHHHhhhhHh
Q 009536 305 KKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT--DGALASLLVGVTNFAGALCASY 381 (532)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~ 381 (532)
++.+++.+....++++++.++...+...+..+ ......++.|.++++. +.+ +.+....+..++.+++.++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~ 313 (485)
T TIGR00711 238 WELTDDNPLVDLRLFKYRNFTIGCVYMSLLGL----GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGR 313 (485)
T ss_pred HHHcCCCCccCHHHHcCCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111222356677665554433333322 3334455667777653 444 5577778888999999999999
Q ss_pred hhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHH
Q 009536 382 LMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGF 461 (532)
Q Consensus 382 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 461 (532)
+.||+++|+.+..+..+.+++..++..... .............+...+.+....+ ......+..|+++++++.|+
T Consensus 314 l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~g~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 388 (485)
T TIGR00711 314 MGDKIDPRKLVTIGLILYAVGFYWRAFTFT----PDTPFLAIALPQFIRGFGMGCFFMP-LTTIALSGLPPHKIARGSSL 388 (485)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCHHHHhHHHHH
Confidence 999999999988888777777666542110 1111122222222222222222223 33445577899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 009536 462 SFSVHWVCNFLVGLFFLDLVETF 484 (532)
Q Consensus 462 ~~~~~~~g~~i~~~~~g~l~~~~ 484 (532)
.+..+++|+.+|+.+.+.+.++.
T Consensus 389 ~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 389 SNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998753
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.2e-31 Score=264.26 Aligned_cols=402 Identities=15% Similarity=0.125 Sum_probs=267.1
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
++..++...+...........+....|.+.+ +|+ ++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGF--SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCC--CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3555666666777777777777777888776 588 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC-C
Q 009536 165 ILGAIISAQA----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-D 239 (532)
Q Consensus 165 ~~~~~~~~~a----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~ 239 (532)
+++.+++++. ++++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+.+.... .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9998887764 4677888999999999999999899999999999999999999999999999998877665433 3
Q ss_pred cchhHHHHHhhHHHHHHHH-HHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhh
Q 009536 240 PHWWRTMLYIASLPGFILA-LGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSEL 318 (532)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (532)
.+ ||+.|++.++++++.. +..++++|+|+....+...+. ..... .+ .....+.+.+......+.+
T Consensus 182 ~~-w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~----~~~~~~~~~~~~~~~~~~~ 247 (438)
T TIGR00712 182 ND-WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEY--------RNDYP-DD----YNEKAEQELTAKEIFMQYV 247 (438)
T ss_pred hh-hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhc--------ccccc-cc----cccccccccchHHHHHHHH
Confidence 45 9999999888877654 444556776643110000000 00000 00 0000000000000111234
Q ss_pred hcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhh
Q 009536 319 LEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGS 395 (532)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 395 (532)
++++..+...+...+. .........+.|.++++. +.+ ..++...+..+.++++.++.|++.||+++++....+
T Consensus 248 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 323 (438)
T TIGR00712 248 LPNKLLWYIAIANVFV----YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATG 323 (438)
T ss_pred ccCchHHHHHHHHHHH----HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHH
Confidence 5666554443322222 223345556778887753 444 456777778889999999999999999654332223
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccccccCccccchhHHHHHHHHHHHH-HHH
Q 009536 396 YLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN-FLV 473 (532)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~i~ 473 (532)
.....+..+........+ ....... ...++..++. .+..........|.+|++.|+++.|+.+...++++ +++
T Consensus 324 ~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~g 398 (438)
T TIGR00712 324 VFFMTLVTIAVIVYWMNP----AGNPLVD-MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA 398 (438)
T ss_pred HHHHHHHHHHHHHHHhcC----CCchHHH-HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhc
Confidence 222222111111100000 0111111 1122222222 12112222456788999999999999999988875 689
Q ss_pred HHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCC
Q 009536 474 GLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETK 512 (532)
Q Consensus 474 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (532)
|.+.|.+.|..||...+.+.+++.+++.+..++.++|.|
T Consensus 399 p~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 399 SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred chhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999998888888777777766666654
No 51
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.2e-31 Score=259.40 Aligned_cols=351 Identities=14% Similarity=0.085 Sum_probs=261.3
Q ss_pred HHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (532)
+..+.++..+......+.+|.+..+++. +..+.+++.+++.++..++++++|+++||+|||++++.+.++.+++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTG--SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 4556677778888888999999999988 89999999999999999999999999999999999999999999999988
Q ss_pred Hhhh-----cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009536 172 AQAH-----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (532)
Q Consensus 172 ~~a~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~ 246 (532)
++++ +++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..+ ||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHH
Confidence 8887 999999999999999999999999999999999999999999999999999999999999988777 9999
Q ss_pred HHhhHHHHHHHHHHhcccc--cChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcc
Q 009536 247 LYIASLPGFILALGMQFTV--ESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHS 324 (532)
Q Consensus 247 f~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (532)
|++.++..++..+..+.++ |+++ +++.+. .++... +....++.+++++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------------~~~~~~-----------~~~~~~~~~~~~~~~ 212 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPELAA----SEIQAL-------------SNAVLR-----------DTREGIKFVLKNPLL 212 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCC----cccccc-------------chhHHH-----------HHHhHHHHHHcCcHH
Confidence 9988776666544443332 2211 000000 000000 001234455666665
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHH
Q 009536 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAI 401 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 401 (532)
+.......+..... ......+.|.+.++ .+.+ +.+.......++.+++.++.+++.||.++|+.+..+..+.++
T Consensus 213 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 213 RTLLLLALLFNLVF---APAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHH
Confidence 54443333322211 11222455666554 3444 456777778889999999999999999999988877666666
Q ss_pred HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 009536 402 SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 480 (532)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 480 (532)
+...+... ...........+..+++.+ ..+....+..|..|++.|+++.|+.+...+++..++|.+.|.+
T Consensus 290 ~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 290 AILVVGLT---------PPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHhh---------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555441 1112222222233333333 3456677888999999999999999999999999999999999
Q ss_pred HHhhC
Q 009536 481 VETFG 485 (532)
Q Consensus 481 ~~~~g 485 (532)
.|..|
T Consensus 361 ~~~~g 365 (365)
T TIGR00900 361 ADHLG 365 (365)
T ss_pred HHHcC
Confidence 98764
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.8e-32 Score=266.61 Aligned_cols=372 Identities=17% Similarity=0.131 Sum_probs=255.0
Q ss_pred HhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh
Q 009536 95 SNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA 174 (532)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 174 (532)
+.+...++...++...|.+.+++|. +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGL--SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCC--CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 4566677888889999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHH-HhcCCCCCCcchhHHHHHhhHHH
Q 009536 175 HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL-FLGIPAEDDPHWWRTMLYIASLP 253 (532)
Q Consensus 175 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~~~wr~~f~~~~~~ 253 (532)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+ ||+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 159 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGII 159 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 56666666666 99999988877
Q ss_pred HHHHH-HHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHH
Q 009536 254 GFILA-LGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGA 332 (532)
Q Consensus 254 ~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (532)
.++.. +..++.+|+|+....+...++.. ++. +..+...+++.+..+...+.+++++..+...+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (379)
T TIGR00881 160 AIIVSLICFLLLRDSPQSCGLPPAEEMPN---------EEP----DGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYV 226 (379)
T ss_pred HHHHHHHHheeeCCCccccccCccccCcc---------ccc----ccccccccccccchHHHHHHHHhcchHHHHHHHHH
Confidence 76654 44445566543211000000000 000 00000000011111223455666665544333332
Q ss_pred HHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHH
Q 009536 333 LFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGA 409 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 409 (532)
+. .........+.+.++++ .+.+ +.+.......++.+++.++.+++.||..+++...............+...
T Consensus 227 ~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
T TIGR00881 227 FV----YVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY 302 (379)
T ss_pred HH----HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Confidence 22 22333445556666644 3544 45677778888999999999999998643332222222211111111111
Q ss_pred hcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchh
Q 009536 410 TSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPV 489 (532)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~ 489 (532)
...+ ...........+..+....+..+....+..|.+|++.|+++.|+.+...++|..++|.+.|.+.|..||+..
T Consensus 303 ~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 303 WLNP----AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred hcCc----chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 1000 111112222222222222333344456778999999999999999999999999999999999999998765
Q ss_pred h
Q 009536 490 Y 490 (532)
Q Consensus 490 ~ 490 (532)
|
T Consensus 379 f 379 (379)
T TIGR00881 379 F 379 (379)
T ss_pred C
Confidence 3
No 53
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=8.2e-31 Score=256.19 Aligned_cols=350 Identities=16% Similarity=0.112 Sum_probs=251.7
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
+..+.+..++..+...++.|.+|.+.+++|. ++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQT--SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 3444444555667778888999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009536 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (532)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~ 248 (532)
+++.++++++.+++.|+++|++.+...+...+++.|+++++++++..+.......+|..++|.+++++.+..+ ||+.|+
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~ 164 (401)
T PRK11043 86 LGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFA 164 (401)
T ss_pred HHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHH
Confidence 9999999999999999999999988888888999999999999999999988899999999999999888877 999999
Q ss_pred hhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHH
Q 009536 249 IASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (532)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (532)
+.+++.++..+..++++|+++. + + +++.+..++++++++..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~---~-~-------------------------------~~~~~~~~~~~~~~~~~~~~~ 209 (401)
T PRK11043 165 TLFAITLLLILPTLRLKPSKKA---R-K-------------------------------QSQDALTFKQLLKSKTYLGNV 209 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCc---c-c-------------------------------cchHHHHHHHHHcChhHHHHH
Confidence 9888887766665555554320 0 0 000112345556665544333
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHH
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLV 406 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 406 (532)
+...... ........+.|.++++.+.+. .++......++.+++.++.+++.||+++|+.........+++.+.+
T Consensus 210 ~~~~~~~----~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~ 285 (401)
T PRK11043 210 LIFAACS----AAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAI 285 (401)
T ss_pred HHHHHHH----HHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 2222211 122333445667777666663 4555666677888899999999999999887665555544444333
Q ss_pred HHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009536 407 VGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 485 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 485 (532)
....... ......................+.......+..| +.+|++.|+.+.....++..++.+.|.+.+...
T Consensus 286 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 359 (401)
T PRK11043 286 WLASLLS----HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPL 359 (401)
T ss_pred HHHHHhc----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCCh
Confidence 2211110 1112222221222122222233444455556665 469999999999999999999999998877543
No 54
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=4.2e-31 Score=256.40 Aligned_cols=359 Identities=15% Similarity=0.085 Sum_probs=253.0
Q ss_pred HHhhhhhhccccccchhHH-HHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHH-hhHHHHHHHHHH
Q 009536 94 MSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLILGAIIS 171 (532)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~~~~~~~ 171 (532)
+.++...+..+...|.+|. +.+++|. +..+.|++.+++.+...+.+++.|+++||+|||+.++. +.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRA--RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 3467777788888888886 5788999 89999999999999999999999999999999887654 566667788888
Q ss_pred HhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccch--hhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009536 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSL--GTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (532)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~ 249 (532)
+++++++.+++.|+++|.+.+...|...+++.|+.++++|++. .+....+.++|.++|+.+++.+.+..+ ||+.|++
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~ 160 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLT 160 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHH
Confidence 9999999999999999988888888888899999887777654 577888889999999999999988777 9999999
Q ss_pred hHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHH
Q 009536 250 ASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (532)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (532)
.++..++..+.. +++||.|++..++ ....+.++.++++..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ 205 (375)
T TIGR00899 161 AALAFVLCGVLVWLFLPSYPRGAPGA-----------------------------------LTRLEVRGLLASRDTRLLF 205 (375)
T ss_pred HHHHHHHHHHHHHHhCCCcccCcccc-----------------------------------cCcchhhhhhcCcchHHHH
Confidence 888777665544 4467655310000 0001122234455444333
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHH-HHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHH
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTF-QDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLL 405 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 405 (532)
....+... .......+.|.++ ++.+.+ ..+.......+..+++.++.|++.||+++|+.+..+..+..+....
T Consensus 206 ~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~ 281 (375)
T TIGR00899 206 VACTLMWG----CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTG 281 (375)
T ss_pred HHHHHHHH----HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 32222221 1122233344444 344544 3345555555667778889999999999999887766655444433
Q ss_pred HHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009536 406 VVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 484 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 484 (532)
+... ++.+... ......+++.+ ..+....+..|..|++ ++++.++.+...++|..++|.+.|.+.+..
T Consensus 282 ~~~~---------~~~~~~~-~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~ 350 (375)
T TIGR00899 282 LAAD---------NSLWALL-MLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERW 350 (375)
T ss_pred HHHH---------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3331 1122222 22222222222 2345556777887764 679999999999999999999999999999
Q ss_pred CcchhhHhHHHHHHHHHHhhh
Q 009536 485 GVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 485 g~~~~~~~~~~~~~~~~~~~~ 505 (532)
|++..|.+.+++.+++.++..
T Consensus 351 g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 351 SYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred cchhHHHHHHHHHHHHHHHHh
Confidence 999999888887777766553
No 55
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=3e-31 Score=259.74 Aligned_cols=369 Identities=14% Similarity=0.091 Sum_probs=256.4
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
....+..+++..++.++......+.+|.+++++|+ ++.+.|++.+.+.+++.+++++.|++.||+|||+++..+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~--s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL--TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34456777777888889999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---HhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC----
Q 009536 165 ILGAIIS---AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE---- 237 (532)
Q Consensus 165 ~~~~~~~---~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---- 237 (532)
+++.+++ .++++++.++++|+++|+|.|...+..+.++.|+.++++|.+.+++.+..+.+|..+++.+++.+.
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999886 468899999999999999999999999999999888887777899999999999999998875432
Q ss_pred -------------CC-cc-------hhHHHHHhhHH-HHHHHHHH-hcccccChhHHhhcCChhHHHHHHHHHcCCcchH
Q 009536 238 -------------DD-PH-------WWRTMLYIASL-PGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEIN 294 (532)
Q Consensus 238 -------------~~-~~-------~wr~~f~~~~~-~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (532)
+. .+ +||++|+.... ..++..+. ...+||.+. + +.
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~-~~----------------- 239 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----D-NH----------------- 239 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----c-cc-----------------
Confidence 00 01 26667764333 33232222 222333211 0 00
Q ss_pred HHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHH-HHH-cCCC--hhHHHHHHHHH
Q 009536 295 KAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLT-FQD-VGIT--DGALASLLVGV 370 (532)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~--~~~~~~~~~~~ 370 (532)
.+++..+....+++++++|.++...+..++... .......|.+.+ .++ .+.+ ..+.......+
T Consensus 240 ---------~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~ 306 (438)
T PRK10133 240 ---------SDAKQGSFSASLSRLARIRHWRWAVLAQFCYVG----AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV 306 (438)
T ss_pred ---------ccccccchhhhHHHHHhCchHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Confidence 000001112234566777776554433322222 222233344444 343 3555 45777888899
Q ss_pred HHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccccccccc
Q 009536 371 TNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELS 450 (532)
Q Consensus 371 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (532)
+.++++++.+++.||+++|+++..+..+..+.+.+..+. .....+....+. +.......|..++...+..
T Consensus 307 ~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~-glg~~~i~P~~~s~a~~~~ 376 (438)
T PRK10133 307 CFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA---------GGHVGLIALTLC-SAFMSIQYPTIFSLGIKNL 376 (438)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc---------CChHHHHHHHHH-HHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999888776665555444331 111122222222 2222234577777777877
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhHhHHHHHHHHHH
Q 009536 451 SNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSAL 502 (532)
Q Consensus 451 ~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~ 502 (532)
|++ .+++.++.. +..+|+.++|.+.|.+.|..| .+..|++...+.+....
T Consensus 377 ~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 377 GQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred chh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 664 778888876 456789999999999999887 66777655544444333
No 56
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=4.4e-31 Score=255.86 Aligned_cols=371 Identities=17% Similarity=0.107 Sum_probs=256.0
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
...++++.++..+.........+.+.+|++. ++.+.+|+.+.+.+++.++++++|+++||+|||++++.+.++++++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIALLKELHY--PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHH
Confidence 3455667777777666666667777889888 88889999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009536 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (532)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~ 248 (532)
++++++.+. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++++.+.. |+..+.
T Consensus 83 ~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--~~~~~~ 157 (393)
T PRK11195 83 LLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--AEAALA 157 (393)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 888887664 788999999999999999999999999999999999999999999999999999998743 777777
Q ss_pred hhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHH
Q 009536 249 IASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (532)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (532)
+.+...++..+..+.+||+|++. +.+.++.... .++. ...++.+++++..+..+
T Consensus 158 i~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~-------------~~~~-----------~~~~~~l~~~~~~~~~~ 211 (393)
T PRK11195 158 VCALIYLLAALFNLFIPRLGARR--PGQSWNPIAL-------------LRDF-----------FHACRVLWRDKLGRFSL 211 (393)
T ss_pred HHHHHHHHHHHHHhcCCCCcccc--cccCCCHHHH-------------HHHH-----------HHHHHHHHhCchhHHHH
Confidence 76665555555556677654311 0000000000 0000 01234556666655444
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHHHH-cC--CChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHH
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTFQD-VG--ITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLL 405 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 405 (532)
+...+.... .....+..+.+.++ .+ ..+.+......+++.+++.++.+++.||.++++.+..+.. .++....
T Consensus 212 ~~~~~~~~~----~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~ 286 (393)
T PRK11195 212 AGTTLFWGA----GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLL 286 (393)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHH
Confidence 333222221 12222333333332 23 3356778888889999999999999999988887766643 3333333
Q ss_pred HHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 406 VVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRT-RGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
+.. ..+. +......+..+++.+. .+...+...+..|++. +|++.++.+...+++..++..+.+.+ +.
T Consensus 287 ~~~---------~~~~-~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~ 355 (393)
T PRK11195 287 MAL---------QHSL-LPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VK 355 (393)
T ss_pred HHH---------HhHH-HHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HH
Confidence 322 1122 2222222233333332 2334556667656554 79999999999999999999999854 67
Q ss_pred hCcchhhHhHHHHHHHHHHhhheee
Q 009536 484 FGVAPVYAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
.|.+..+.+.+...+++..+.+.++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 356 LGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888776666665555544443
No 57
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.2e-30 Score=254.33 Aligned_cols=370 Identities=15% Similarity=0.134 Sum_probs=251.2
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 165 (532)
......+.+..+...+......|.+|.+.++++. +..+.++..+++.+++.++++++|+++||+|||++++.+.++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 92 (413)
T PRK15403 15 LFFPMALILYDFAAYLTTDLIQPGIINVVRDFNA--DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFT 92 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHH
Confidence 3334455556667778889999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009536 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (532)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~ 245 (532)
++.+++++++|++.++++|+++|++.+...+....++.|++++++|+++++++..+..+|..+||++++.+.+..+ ||+
T Consensus 93 ~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~ 171 (413)
T PRK15403 93 LACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKV 171 (413)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHH
Confidence 9999999999999999999999999987777788889999999999999999999999999999999998887777 999
Q ss_pred HHHhhHHHHHHHHHH-hcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcc
Q 009536 246 MLYIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHS 324 (532)
Q Consensus 246 ~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (532)
.|++.++..++..+. .+++||+++. +++..+ .+.....++.+++++.+
T Consensus 172 ~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~~----------------------------~~~~~~~~~~ll~~~~~ 220 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLLLAMPETVKR---GAVPFS----------------------------AKSVLRDFRNVFRNRLF 220 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccc---cCCCCC----------------------------hHHHHHHHHHHHcCHHH
Confidence 999988887776554 3446765420 000000 00001234566777665
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHH
Q 009536 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAI 401 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 401 (532)
+...+...+. .........+.|.++++. +.+ +.++.......+.+++..+.+++.++..+++.......+..+
T Consensus 221 ~~~~l~~~~~----~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~i 296 (413)
T PRK15403 221 LTGAATLSLS----YIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHH----HHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHH
Confidence 5443332222 223344555667777655 554 345555556677777777777766554444443322333333
Q ss_pred HHHHHHHHhcCCCCccchhhH-HHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 009536 402 SMLLVVGATSLPLDEDFSHNL-SILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 480 (532)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 480 (532)
+..++....... ...+. ......++..+.+.. .|...... ..-....+|++.++.+.....+..+++...+++
T Consensus 297 g~~l~~~~~~~~----~~~~~~~~~~~~l~~~G~~~~-~p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 297 GLALLIVGNLLW----PHVWLWSVLGTSLYAFGIGLI-FPTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred HHHHHHHHHHHc----cccHHHHHHHHHHHHHHHHHH-hHHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332211000 01111 122222232332222 23232211 111222479999999999999999999999988
Q ss_pred HHhhCcchhhHhHHHHHHHH
Q 009536 481 VETFGVAPVYAGFGGVSLLS 500 (532)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~ 500 (532)
.+. +....|...++++.+.
T Consensus 371 ~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 371 WFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHc-CCchHHHHHHHHHHHH
Confidence 776 5555665555444443
No 58
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=7.1e-31 Score=255.84 Aligned_cols=351 Identities=15% Similarity=0.139 Sum_probs=254.1
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 166 (532)
+.+..+.+..+..........+.+|.+.+++|. ++.+.+++.+++.++..++++++|+++||+|||+++..+.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLST--PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFAL 82 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 334455555566778888999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009536 167 GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (532)
Q Consensus 167 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~ 246 (532)
+.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~ 161 (385)
T TIGR00710 83 SSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAI 161 (385)
T ss_pred HHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998888777 9999
Q ss_pred HHhhHHHHHHHHHHhc-ccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcch
Q 009536 247 LYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSR 325 (532)
Q Consensus 247 f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (532)
|++.++..++..+..+ +.||+++.. .+ + ..+ .....+++.++++..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-------------~~~---------------~~~~~~~~~~~~~~~~ 209 (385)
T TIGR00710 162 FAFLSLAGILLSALIFFILPETLPYE---AR-I-------------QIS---------------TYFETFLLLLKSKMFW 209 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCc---cc-C-------------CHH---------------HHHHHHHHHHcCchhH
Confidence 9998877776554443 455543210 00 0 000 0011234455666555
Q ss_pred HHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHH
Q 009536 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAIS 402 (532)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 402 (532)
...+...... ........+.|.+++ +.+.+ +.+.......++.+++.++.+++.||+++|+.+..+..+..++
T Consensus 210 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 210 GYALIYGASF----GGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVS 285 (385)
T ss_pred HHHHHHHHHH----HHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4433322222 122333444555554 44554 4466777778899999999999999999999888877777766
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 403 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
..++...... ...............+.+.+ ..+.......|..| +.++++.++.+.....++.+.+.+.+.+.
T Consensus 286 ~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~ 359 (385)
T TIGR00710 286 AVLLEITAIL-----GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIH 359 (385)
T ss_pred HHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6655442210 01112222222222222222 23444556667766 56999999999998877777777777444
Q ss_pred H
Q 009536 482 E 482 (532)
Q Consensus 482 ~ 482 (532)
+
T Consensus 360 ~ 360 (385)
T TIGR00710 360 G 360 (385)
T ss_pred c
Confidence 3
No 59
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=1.2e-30 Score=251.03 Aligned_cols=343 Identities=29% Similarity=0.380 Sum_probs=282.4
Q ss_pred HHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHH
Q 009536 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (532)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (532)
.+.+..+...++.....+..|.+.+++|. +..+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGL--SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 45566778888888999999999999988 8999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh
Q 009536 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (532)
Q Consensus 171 ~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~ 250 (532)
+.+.++++.++++|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+.+..+ ||+.|++.
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLIL 159 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877 99999998
Q ss_pred HHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHH
Q 009536 251 SLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIG 330 (532)
Q Consensus 251 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (532)
++..++..+...+++ +.++.
T Consensus 160 ~~~~~~~~~~~~~~~------------------------------------------------------------~~~~~ 179 (352)
T cd06174 160 AILGLLLALLLLFLL------------------------------------------------------------RLLLL 179 (352)
T ss_pred HHHHHHHHHHHHHHH------------------------------------------------------------HHHHH
Confidence 888777665554332 11222
Q ss_pred HHHHHHhhhcchhhHHHhHHHHHHHc-CCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCch-hhhhhHHHHHHHHHHH
Q 009536 331 GALFLLQQFAGINGVLYFSSLTFQDV-GIT--DGALASLLVGVTNFAGALCASYLMDKEGRQK-LLIGSYLGMAISMLLV 406 (532)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~ 406 (532)
..+..+...........+.+.+.++. +.+ +.+.......++..++.++.+++.||+++|+ .+..+..+..++.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL 259 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 22333333444555666777777665 444 4577778888999999999999999999999 8888888888877776
Q ss_pred HHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009536 407 VGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGV 486 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~ 486 (532)
... .+........++.........+....+..|..|+++|++..|+.+...+++..+++.+.+.+.+..++
T Consensus 260 ~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~ 330 (352)
T cd06174 260 ALA---------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY 330 (352)
T ss_pred HHh---------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 652 22222223333333333334577788999999999999999999999999999999999999999999
Q ss_pred chhhHhHHHHHHHHHHhhh
Q 009536 487 APVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~ 505 (532)
...+.+.+++.+++.++.+
T Consensus 331 ~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 331 GGVFLILAALALLAALLLL 349 (352)
T ss_pred chHHHHHHHHHHHHHHHhe
Confidence 9999988888888776553
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=7.2e-31 Score=255.76 Aligned_cols=353 Identities=17% Similarity=0.208 Sum_probs=245.4
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
+.+.....+..........+.+|.+.+++|. +..+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNA--SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 3344444555566666777889999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009536 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (532)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~ 248 (532)
+++.++++++.+++.|+++|++.+...+...+++.|++++++|+++.++.+....+|..++|.+++.+.+..+ ||+.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~ 161 (392)
T PRK10473 83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFY 161 (392)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988877777 999999
Q ss_pred hhHHHHHHHHHH-hcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHH
Q 009536 249 IASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (532)
Q Consensus 249 ~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (532)
+.++..++..+. .++++|+++. +.+ + +.......++.++++.++..
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~~~---~~~-~-----------------------------~~~~~~~~~~~~~~~~~~~~ 208 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETRPA---RAP-A-----------------------------ASSKPRENSESLLNRFFLSR 208 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCc---ccC-C-----------------------------ccchHHHHHHHHhCHHHHHH
Confidence 988777665544 3445554320 000 0 00000112234444443332
Q ss_pred HHHHHHHHHhhhcchhhHHHhHHHHH-HHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHH
Q 009536 328 FIGGALFLLQQFAGINGVLYFSSLTF-QDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISML 404 (532)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 404 (532)
.....+... .......+.|.++ ++.+.+ ..+......+++.+++.++.+++.||+++|+.+..+..+..++.+
T Consensus 209 ~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~ 284 (392)
T PRK10473 209 LVITTLSVT----VILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGI 284 (392)
T ss_pred HHHHHHHHH----HHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 222221111 1112223334444 344555 345666777888999999999999999999998888877777766
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009536 405 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 484 (532)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 484 (532)
++.... ..........+...+++.+... ....+..|.++++ |..+....++..+++.+.+.+.+..
T Consensus 285 ~~~~~~--------~~~~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 285 TLALSP--------SHAVSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHH--------HHHHHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665521 1122222223333333332221 2223344544443 4444556677788888888888888
Q ss_pred CcchhhHhHHH
Q 009536 485 GVAPVYAGFGG 495 (532)
Q Consensus 485 g~~~~~~~~~~ 495 (532)
|+.....+.+.
T Consensus 351 g~~~~~~~~~~ 361 (392)
T PRK10473 351 GISAWNMLIGI 361 (392)
T ss_pred ccchhHHHHHH
Confidence 87654544444
No 61
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=8.1e-31 Score=238.14 Aligned_cols=379 Identities=15% Similarity=0.156 Sum_probs=291.0
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 163 (532)
...+.+.+..++..+..+...++++..+.+.+|+|+ |+.|.+++.++..+...+..++.|.+.||||.|++..++.++
T Consensus 11 ~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~L--S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 11 IARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGL--SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC--CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 345567777777778888888999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc---HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc
Q 009536 164 LILGAIISAQAHS---LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (532)
Q Consensus 164 ~~~~~~~~~~a~~---~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 240 (532)
..+-.+..+++.+ ++++++++++.|++. +.+.+...++++||||+++|.++|+.. ..++|..+..+++..+....
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 9999999999854 459999999999985 588888999999999999999999999 88888888877777776665
Q ss_pred c--hhHHHHHhhHHHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCc-chhh
Q 009536 241 H--WWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLD-SQWS 316 (532)
Q Consensus 241 ~--~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 316 (532)
+ .||....+..+..++..+..++ +.|.|.. +...++.. ...+
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~----------------------------------r~~~~~~~~~~~~ 212 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEH----------------------------------RASVKPQLPAQLK 212 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh----------------------------------hccccccchhHHH
Confidence 5 3999999988888876555544 5555431 01111111 3455
Q ss_pred hhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhh
Q 009536 317 ELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLI 393 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 393 (532)
.+++++..|... +.++..+..+..+..++|.++++ ++.+ +++.......+.+.+.++++|+++||+|.+|+..
T Consensus 213 ~v~~~~~~W~ls----llY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~ 288 (417)
T COG2223 213 AVFSNKDTWLLS----LLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTL 288 (417)
T ss_pred HHhcCcchHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHH
Confidence 666677655443 34444566777778888888765 4555 4567777888889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhhHHHHH-HHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHH
Q 009536 394 GSYLGMAISMLLVVGATSLPLDEDFSHNLSILG-TLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFL 472 (532)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i 472 (532)
..+..++++..++...+... ........... .+......+.|. ...+-++...+|. +.|.+.|+...+..+|++.
T Consensus 289 ~~f~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~l~~~~G~Gn-Gsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~ 364 (417)
T COG2223 289 AVFVGMALAAALLSLFLTGF--GHGGSFVVFVAVFLALFVFAGLGN-GSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFF 364 (417)
T ss_pred HHHHHHHHHHHHHHcccccc--ccCcchHHHHHHHHHHHHHhccCc-chheeechHHHHh-hhhHHHHHHHHhccccccc
Confidence 88888888887776632111 00011222222 222223333333 3456778888877 4899999999999999999
Q ss_pred HHHHHHHHHHhhC-cchhhHhHHHHHHHHHHhhheee
Q 009536 473 VGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 473 ~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
-|...|...+..| +...|+++..+.+++.++.+...
T Consensus 365 lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 365 LPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred hhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 78888888888888777665443
No 62
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=4.5e-31 Score=254.55 Aligned_cols=362 Identities=19% Similarity=0.221 Sum_probs=267.1
Q ss_pred HHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhh--cHHHHHHHHHHHhhhh
Q 009536 114 AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGRFLVGLGI 191 (532)
Q Consensus 114 ~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~ 191 (532)
..++++ +..+.+++.++++.|+.+++++.|++.||||.|+++..+.++.++++++..++. +++.+++.|++||++.
T Consensus 65 ~~~~~w--s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 65 AGEYDW--SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred CceecC--CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHH
Confidence 346777 889999999999999999999999999999999999999999999999999874 5567899999999999
Q ss_pred hhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC-cchhHHHHHhhHHHHHHHHHHhccc-ccChh
Q 009536 192 GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD-PHWWRTMLYIASLPGFILALGMQFT-VESPR 269 (532)
Q Consensus 192 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~wr~~f~~~~~~~~~~~~~~~~~-~~~p~ 269 (532)
|..+|+...+...|.|++||++..++...+..+|.+++.+++|++.+. .| |++.|++.++.+++..++++++ .|+|.
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999988 66 9999999999999988777654 46664
Q ss_pred HHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCC--CcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHH
Q 009536 270 WLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSD--LDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLY 347 (532)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (532)
. +.. ..++|.+..+....+++.+ .+.+|+++++++..|..++. .+........+..
T Consensus 222 ~---h~~---------------is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~----~f~~~~~~~~l~~ 279 (466)
T KOG2532|consen 222 K---HPN---------------ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWIS----AFGGNWGFYLLLT 279 (466)
T ss_pred c---CCC---------------CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHH----HHHHHHHHHHHHH
Confidence 2 100 1111112222222211111 46789999999876555443 3444556777888
Q ss_pred hHHHHHHHc---CCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCc---------hhhhhhHHHHHHHHHHHHHHhcCCCC
Q 009536 348 FSSLTFQDV---GITDGALASLLVGVTNFAGALCASYLMDKEGRQ---------KLLIGSYLGMAISMLLVVGATSLPLD 415 (532)
Q Consensus 348 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (532)
|.|.|+++. +..+.++...+..+...+..+++|.++||..+| ..-.++....+++++.+.+...
T Consensus 280 y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~---- 355 (466)
T KOG2532|consen 280 YLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSD---- 355 (466)
T ss_pred HhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCC----
Confidence 899998865 445778999999999999999999999998663 1123334444444444443211
Q ss_pred ccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH---hhCcchhhHh
Q 009536 416 EDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE---TFGVAPVYAG 492 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~---~~g~~~~~~~ 492 (532)
......+. .+.+..++.....+-.+.-..+. .+++.+..+|+.+.+..+.++++|.+.|.+.. ...|+.+|++
T Consensus 356 --~~~~~a~~-~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i 431 (466)
T KOG2532|consen 356 --EHRLLAVI-LLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLI 431 (466)
T ss_pred --CcchHHHH-HHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHH
Confidence 11112222 22222222221222222222232 46679999999999999999999999999983 2359999999
Q ss_pred HHHHHHHHHHhhheee
Q 009536 493 FGGVSLLSALFAYYFI 508 (532)
Q Consensus 493 ~~~~~~~~~~~~~~~~ 508 (532)
.+++.+++.++..++-
T Consensus 432 ~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 432 AAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHhchheeEee
Confidence 9999998887665553
No 63
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.98 E-value=3.7e-30 Score=250.07 Aligned_cols=358 Identities=14% Similarity=0.072 Sum_probs=248.1
Q ss_pred HHhhhhhhccccccchhH-HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHH
Q 009536 94 MSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (532)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 172 (532)
...++.........+.++ .+.+++|+ +..+.|++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~ 94 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGW--AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 445555555566566665 46788999 999999999999999999999999999999999999999999999999999
Q ss_pred hhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHH
Q 009536 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASL 252 (532)
Q Consensus 173 ~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~ 252 (532)
++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++++. ..+ ||+.|++.++
T Consensus 95 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~~ 172 (400)
T PRK11646 95 IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGAV 172 (400)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHH
Confidence 99999999999999999999889999999999999999999999999999999999999999988 556 9999999887
Q ss_pred HHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHH
Q 009536 253 PGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGG 331 (532)
Q Consensus 253 ~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (532)
..++..+.. ++.||.+. .+ .+++....++++++++.++......
T Consensus 173 ~~~~~~i~~~~~~~~~~~-----~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
T PRK11646 173 LFVLAAAFNAWLLPAYKL-----ST------------------------------VRTPVREGMTRVLRDKRFVTYVLTL 217 (400)
T ss_pred HHHHHHHHHHHhCCcccc-----cc------------------------------cchhhHHHHHHHHcCchHHHHHHHH
Confidence 766654433 33443210 00 0000112344556666544332222
Q ss_pred HHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhh-hcCCchhhhhhHHHHHHHHHHHHH
Q 009536 332 ALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMD-KEGRQKLLIGSYLGMAISMLLVVG 408 (532)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~ 408 (532)
..... .......+.|.+.++.+.. ..+.......+....+....+++.| |++.++.+..+..+.+++..++..
T Consensus 218 ~~~~~----~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ 293 (400)
T PRK11646 218 TGYYM----LAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM 293 (400)
T ss_pred HHHHH----HHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Confidence 11111 1122334567776665443 3345555555555544444455554 566666666666666666555544
Q ss_pred HhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC---
Q 009536 409 ATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG--- 485 (532)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g--- 485 (532)
.. +.........++..+.+ ...|...++..+..|++++|+++|+.+...++|..+||.+.|.+.|..+
T Consensus 294 ~~--------~~~~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~ 364 (400)
T PRK11646 294 VS--------NLQQLFTLICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALN 364 (400)
T ss_pred hh--------hHHHHHHHHHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcC
Confidence 11 11111121222222222 2335666788899999999999999999999999999999999998753
Q ss_pred -cchhhHhHHHHHHHHHHh
Q 009536 486 -VAPVYAGFGGVSLLSALF 503 (532)
Q Consensus 486 -~~~~~~~~~~~~~~~~~~ 503 (532)
....+...+.+.+++.+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 365 QPELPWMMLGIIGLITLLA 383 (400)
T ss_pred CcchHHHHHHHHHHHHHHH
Confidence 234444444444444443
No 64
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=3.2e-31 Score=255.06 Aligned_cols=345 Identities=25% Similarity=0.315 Sum_probs=249.8
Q ss_pred HHHhhhhhhccccccchhH-HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH
Q 009536 93 SMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (532)
+++.++..+......+.+| .+.+++|. +..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGL--SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTT--TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 4567777888888899999 89999999 89999999999999999999999999999999999999999999997777
Q ss_pred HhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhH
Q 009536 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (532)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~ 251 (532)
.+++|++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|.++++.+++.+.+..+ ||+.|++.+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~ 158 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISA 158 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccccccccc
Confidence 7778888999999999999999999999999999999999999999999999999999999999997777 999999999
Q ss_pred HHHHHHHHH-hcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHH
Q 009536 252 LPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIG 330 (532)
Q Consensus 252 ~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (532)
++.++..++ ..+++++++....+.+.++. ++.+++....++.+++++..+..+..
T Consensus 159 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEPPPPRERESPKESE------------------------SKKPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp HHHHHHHHHHHCCC---STTTT--SSTTTT--------------------------HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred chhhhhhhhHhhhhhhcccccccccccccc------------------------cccccccccccccccccchhhhhhhh
Confidence 998887664 24444433211111000000 00000111125556666655522222
Q ss_pred HHHHHHhhhcchhhHHHhHHHH-HHHcCCC---hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHH
Q 009536 331 GALFLLQQFAGINGVLYFSSLT-FQDVGIT---DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLV 406 (532)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 406 (532)
.... .........+.|.+ .+..+.+ +.+.......+..+++.++.+++.||+++++..........+..+.+
T Consensus 215 ~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 290 (352)
T PF07690_consen 215 FFLF----FFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGL 290 (352)
T ss_dssp HHHH----HHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhHH----HHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 2222 22233355566665 3444444 34556777788888889999999999999887776666665555554
Q ss_pred HHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHH
Q 009536 407 VGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG 474 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~ 474 (532)
..... ...........++.+.......+....+..+..|++++|++.|+.+...+++..++|
T Consensus 291 ~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 291 LLLPF------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CCSHH------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 43211 111122222222222222223567778899999999999999999999999999987
No 65
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=3.2e-30 Score=250.00 Aligned_cols=368 Identities=12% Similarity=0.071 Sum_probs=260.2
Q ss_pred HHHHHHHhhhhhhccccccchhH-HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
+..+.+..++.........+.+| .+.+++|+ +..+.|++.+++.++..+++++.|+++||+|||++++++.++.+++
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~ 86 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSL--SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG 86 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence 44555566777777777777765 56678999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009536 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (532)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f 247 (532)
.++.+++++++.++++|++.|.+.+...+...++..|.+++++|++++++.....++|.+++|.+++++.. .+ |+..|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f 164 (395)
T PRK10054 87 FIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPF 164 (395)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHH
Confidence 99999999999999999999988888888899999999999999999999999999999999999998875 45 99999
Q ss_pred HhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchH
Q 009536 248 YIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (532)
Q Consensus 248 ~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (532)
++.++..++..+.. ++++++++. + +.+ + +.....++.++++.++.
T Consensus 165 ~~~~~~~~i~~i~~~~~~~~~~~~---~-~~~--------------------------~----~~~~~~~~~~~~~~~~~ 210 (395)
T PRK10054 165 WLAAICSAFPLVFIQIWVQRSEKA---I-ATE--------------------------T----GSVWSPSVLLQDKALLW 210 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc---c-ccc--------------------------h----hhhhhhhhhccCceehH
Confidence 98887777654443 334443210 0 000 0 00011245566676665
Q ss_pred HHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHH
Q 009536 327 AFIGGALFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISML 404 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 404 (532)
......+..+...........+.+.. ++.+.+. .+.......+.........|++.||.++|+.+..+..+..++..
T Consensus 211 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~ 289 (395)
T PRK10054 211 FTCSGFLASFVSGAFASCISQYVMVV-ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLV 289 (395)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHh-cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHH
Confidence 55443333322221112222222222 2233322 23444444555556667888999999999988888777777666
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 405 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
.+... .+..+.........+.+.+. .|.....+.+..|++.++++.+..+ ...+|..+||.+.|.+.|+
T Consensus 290 ~~~~~---------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~ 359 (395)
T PRK10054 290 GFIFS---------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT 359 (395)
T ss_pred HHHHc---------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH
Confidence 55431 11122222222233333222 4566677888889999999998755 6779999999999999999
Q ss_pred hCcchhhHhHHHHHHHHHHhhh
Q 009536 484 FGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
.|+...|++.+.+..+..++..
T Consensus 360 ~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 360 LPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred cChhhHHHHHHHHHHHHHHHHH
Confidence 9988888777666666555543
No 66
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=6.8e-30 Score=247.96 Aligned_cols=358 Identities=15% Similarity=0.075 Sum_probs=257.6
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
+.++++..+..++..+..++.+|.+++++|+ +..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~--s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTL--TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 5677778888899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC------
Q 009536 169 IISAQ---AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD------ 239 (532)
Q Consensus 169 ~~~~~---a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------ 239 (532)
+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.+++.+...
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88654 468999999999999999999999999999999999999999999999999999999988766321
Q ss_pred -------------------cchhHHHHHhhHHHHHHHHHHhcc--cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHH
Q 009536 240 -------------------PHWWRTMLYIASLPGFILALGMQF--TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIE 298 (532)
Q Consensus 240 -------------------~~~wr~~f~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (532)
..+||++|++.+++.++..+...+ .|+.++ .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~----------------------- 214 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S----------------------- 214 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c-----------------------
Confidence 013999999888877665544433 222110 0
Q ss_pred HHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcC--CCh--hHHHHHHHHHHHHH
Q 009536 299 EFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVG--ITD--GALASLLVGVTNFA 374 (532)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~ 374 (532)
++++.......+++++++..+...+..+++.. .......+++.+.++.+ .+. +.........+..+
T Consensus 215 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg----~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~v 284 (410)
T TIGR00885 215 ------DAKQISFSASLSRLARIRHYREGVIAQFFYVG----VQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFI 284 (410)
T ss_pred ------ccccccchhhHHHHHhChhHHHHHHHHHHHHH----HHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 00000111133455666665554443333322 23334456666665542 222 23334445577889
Q ss_pred HhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccc
Q 009536 375 GALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRT 454 (532)
Q Consensus 375 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (532)
|+++++++.||+++|+.+.+...+..+..++.... ..... ...+.....+....+|..++...+..+++.
T Consensus 285 GR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~---------~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~ 354 (410)
T TIGR00885 285 SRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA---------GGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDT 354 (410)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc---------CChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999998877777776666665541 12222 222333333444455888888888888775
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhh------CcchhhHhHHHHHH
Q 009536 455 RGKIMGFSFSVHWVCNFLVGLFFLDLVETF------GVAPVYAGFGGVSL 498 (532)
Q Consensus 455 ~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~------g~~~~~~~~~~~~~ 498 (532)
+..+.++... -+|+++.|++.|.+.|.. +++..|++...+.+
T Consensus 355 ~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 355 KYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred hhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 5445555443 399999999999999964 36666665444333
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=9.9e-30 Score=248.72 Aligned_cols=358 Identities=16% Similarity=0.179 Sum_probs=241.5
Q ss_pred hhhhhccccccchhHHHHHhhCCCCChhHHHHHHHH--H---HHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH
Q 009536 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSI--F---IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~---~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (532)
+.+.++...++...+.+.+++..+.++.+.+.+.+. + .++..+++++.|+++||+|||++++.+.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 456677777788888888886543345555554443 3 33344689999999999999999999999999999999
Q ss_pred HhhhcHH--------HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC------
Q 009536 172 AQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE------ 237 (532)
Q Consensus 172 ~~a~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------ 237 (532)
++++++. .++++|+++|++.+...+....++.|++++++|++..++.+.+..+|.++++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999875 47889999999999999999999999999999999999999999999999988765442
Q ss_pred --CCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchh
Q 009536 238 --DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQW 315 (532)
Q Consensus 238 --~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (532)
+..+ ||+.|++.+++.++..+.....+|+|++..++ +++++...+.
T Consensus 163 ~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~ 210 (394)
T TIGR00883 163 ALLEWG-WRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQ-------------------------------EKHKKKRGPI 210 (394)
T ss_pred Hhhccc-hHHHHHHHHHHHHHHHHHHHhcCCChhHHHHH-------------------------------hccccccCCH
Confidence 2345 99999988777766655555566654321100 0011112334
Q ss_pred hhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhh
Q 009536 316 SELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLL 392 (532)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 392 (532)
++.+++++.. ... .....+...........+.|.+.+ +.+.+ ..+.......++..++.++.|++.||++||+.+
T Consensus 211 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 288 (394)
T TIGR00883 211 RETLTKHRKP-FLL-GLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL 288 (394)
T ss_pred HHHHHhchHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 4555544311 111 122222223334445566777764 34444 446666777888999999999999999999977
Q ss_pred hhhHHHHHHHH-HHHHHHhcCCCCccchhhHHHHHHHHHHHHH-hcccccccccccccccCccccchhHHHHH-HHHHHH
Q 009536 393 IGSYLGMAISM-LLVVGATSLPLDEDFSHNLSILGTLFYIFTF-AIGAGPVTGLVIPELSSNRTRGKIMGFSF-SVHWVC 469 (532)
Q Consensus 393 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g 469 (532)
.....+..+.. ..+..... ..............++ .....+....++.|.+|++.|+++.++.+ ....+|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g 361 (394)
T TIGR00883 289 IIFTVLAALLAVPLLMALLD-------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIF 361 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhc-------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHH
Confidence 65544443322 22211110 1111222222222222 22334556788899999999999999854 445678
Q ss_pred HHHHHHHHHHHHHhhC-cchhhHhHHH
Q 009536 470 NFLVGLFFLDLVETFG-VAPVYAGFGG 495 (532)
Q Consensus 470 ~~i~~~~~g~l~~~~g-~~~~~~~~~~ 495 (532)
..++|.+.|.+.|..| +...++...+
T Consensus 362 ~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 362 GGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred hhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 8899999999999988 5555544443
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=1.3e-29 Score=251.74 Aligned_cols=374 Identities=14% Similarity=0.108 Sum_probs=257.1
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-----chhHH-HHHhhH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRT-FQIDTI 162 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~ 162 (532)
...+.+..+..+.......+.+|...++.|. +..++|.. +.....+ ++.+++|+++||+ |||+. ++.+.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~--~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENI--DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 3444455566777777888899999999998 88888886 4444444 6899999999999 99886 667777
Q ss_pred HHHHHHHHHHhh---hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC-
Q 009536 163 PLILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED- 238 (532)
Q Consensus 163 ~~~~~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~- 238 (532)
+.+++..++++. ++++.+.+.+++.|++.+...+...+++.|++|++||+++.++...+..+|.++++.++.++.+
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777777777775 4788899999999999999999999999999999999999999999999999999999988887
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhh
Q 009536 239 DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSEL 318 (532)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (532)
..+ ||..|++.+++.++..+..++.+|+++.. .+.++ . ++....++++.
T Consensus 170 ~~G-Wr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~~~~-------------~--------------~~~~~~~l~~~ 218 (491)
T PRK11010 170 YLG-WQGMYWLMAALLIPCIIATLLAPEPTDTI---PVPKT-------------L--------------EQAVVAPLRDF 218 (491)
T ss_pred ccC-HHHHHHHHHHHHHHHHHHHHhcCCCcccc---ccccc-------------h--------------hhhHHHHHHHH
Confidence 456 99999998888777766655666653210 00000 0 00001234455
Q ss_pred hcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHH-HHHcCCCh--hHHHH-HHHHHHHHHHhhhhHhhhhhcCCchhhhh
Q 009536 319 LEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLT-FQDVGITD--GALAS-LLVGVTNFAGALCASYLMDKEGRQKLLIG 394 (532)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 394 (532)
++++..+.......+.... ......+.+.+ .++.|.+. .+... ....++.+++.+++|++.||+++|+.+.+
T Consensus 219 ~~~~~~~~~ll~~~l~~~~----~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i 294 (491)
T PRK11010 219 FGRNNAWLILLLIVLYKLG----DAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMI 294 (491)
T ss_pred HcCcCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6555544433333222221 11222233333 34456653 34544 34457889999999999999999887776
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhHHHH-HHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHH
Q 009536 395 SYLGMAISMLLVVGATSLPLDEDFSHNLSIL-GTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLV 473 (532)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~ 473 (532)
+..+.++..+.+...... ..+...+. ..++.....+.+. +...++..+..+++.+++..|+.+...++|..++
T Consensus 295 ~~~l~~l~~l~~~~l~~~-----~~~~~~l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~ 368 (491)
T PRK11010 295 FGILQGVSNAGYWLLSIT-----DKNLYSMGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYV 368 (491)
T ss_pred HHHHHHHHHHHHHHHHhc-----cccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 655545444333221110 01111111 1122111122222 2345667788899899999999999999999999
Q ss_pred HHHHHHHHHhhCcchhhHhHHHHHHHHHHhhhee
Q 009536 474 GLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 507 (532)
Q Consensus 474 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
+.+.|.+.|..||...|.+.+++.+++.++....
T Consensus 369 ~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 369 GPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888888888776666443
No 69
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=8.6e-29 Score=237.76 Aligned_cols=331 Identities=16% Similarity=0.158 Sum_probs=236.8
Q ss_pred hccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHH
Q 009536 101 YHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEM 180 (532)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l 180 (532)
......++.+|.+.+++|+ +..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+.+ .+++++.+
T Consensus 14 ~~~~~~~~~lp~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l 90 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGM--SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALL 90 (355)
T ss_pred CccccCcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHH
Confidence 3346778999999999999 99999999999999999999999999999999999999999988888887 78899999
Q ss_pred HHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcch-hHHHHHhhHHHHHHHHH
Q 009536 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW-WRTMLYIASLPGFILAL 259 (532)
Q Consensus 181 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~-wr~~f~~~~~~~~~~~~ 259 (532)
++.|++.|++.+...+....++.|+++ ++|++++++++.+..+|..+++.+++.+.+..+. ||+.|.+.++..++..+
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 169 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL 169 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999988888889999986 5799999999999999999999998877665433 99998876665443322
Q ss_pred HhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhh
Q 009536 260 GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQF 339 (532)
Q Consensus 260 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
.++++.++. + +++++......++.++++..+...+... ...
T Consensus 170 --~~~~~~~~~---~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 210 (355)
T TIGR00896 170 --AWIPQVRRR---V------------------------------AANQTTTRLTPVRIWRSPLAWQVTVFFG----LQS 210 (355)
T ss_pred --HHhhhhccc---c------------------------------CCCCCCCCCCCchhhcCHhHHHHHHHHH----HHH
Confidence 223332110 0 0000001123345566655443322222 222
Q ss_pred cchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcC-CchhhhhhHHHHHHHHHHHHHHhcCCCCc
Q 009536 340 AGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEG-RQKLLIGSYLGMAISMLLVVGATSLPLDE 416 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (532)
........+.|.++++.+.+ ..+.......++.++++++.|++.||++ +|+.+..+..+.+++.+.+.+..
T Consensus 211 ~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~------ 284 (355)
T TIGR00896 211 GLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP------ 284 (355)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh------
Confidence 23344556777777777665 4567777888999999999999999994 55566666666666655554421
Q ss_pred cchhhHHHHHHHHHHHHHhccc-cccccccccc-ccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009536 417 DFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPE-LSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 485 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 485 (532)
..... .... ..+++.+. .+.......+ ..++++++...++.+.+.+++.+++|.+.|.+.|+.|
T Consensus 285 --~~~~~-~~~~--l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 285 --MHGLW-AWAL--VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred --hhHHH-HHHH--HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 1122 22333332 3443344443 3445677899999999999999999999999999887
No 70
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=2.1e-29 Score=244.49 Aligned_cols=334 Identities=15% Similarity=0.191 Sum_probs=230.7
Q ss_pred hccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHH
Q 009536 101 YHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEM 180 (532)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l 180 (532)
+...++.|.+|.+.+++|+ ++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGV--SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 4556677999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009536 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (532)
Q Consensus 181 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (532)
+++|+++|++.+...+...+++.|++++++|++++++.+.+..+|..++|.+++.+.+..+ ||+.|++.+++.++..+.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998888777 999999888877765444
Q ss_pred h-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhh
Q 009536 261 M-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQF 339 (532)
Q Consensus 261 ~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
. ++++|+++.. ++.+ ...+ +....+++.++++..+...+... ..+
T Consensus 162 ~~~~~~~~~~~~-~~~~--------------~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~----~~~ 207 (377)
T PRK11102 162 VFFFIPETLPKE-RRQP--------------FHLR---------------TTIRNFASLFRHKRVLGYMLASG----FSF 207 (377)
T ss_pred HHHhCCccCccc-ccCC--------------CChH---------------HHHHHHHHHHcChHHHHHHHHHH----HHH
Confidence 3 4555543210 0000 0000 00112344555554433222211 112
Q ss_pred cchhhHHHhHHHHH-HHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCc
Q 009536 340 AGINGVLYFSSLTF-QDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDE 416 (532)
Q Consensus 340 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (532)
........+.|.++ +..+.+ +.+.......++.+++.++.+++.||+|+|+.+..+..+..+..+.+.......
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~--- 284 (377)
T PRK11102 208 AGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD--- 284 (377)
T ss_pred HHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 22223333334443 334544 456777788889999999999999999999988877765444333322211000
Q ss_pred cchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHH-HHHHHHHHHH
Q 009536 417 DFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHW-VCNFLVGLFF 477 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~i~~~~~ 477 (532)
...+.......++..+.+ ...+.......|..| +.++++.++.+.... ++..+++.+.
T Consensus 285 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 285 -LGFWALVVGVAAFVGCVS-MISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred -hhHHHHHHHHHHHHHHHH-HhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111112222222222 122223345566666 679999999877654 4445555443
No 71
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=1.1e-28 Score=238.90 Aligned_cols=359 Identities=14% Similarity=0.053 Sum_probs=256.5
Q ss_pred HHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHH----HHhhHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTF----QIDTIPLILG 167 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l----~~~~~~~~~~ 167 (532)
+.+..+...+......|.+|.+.+++|. +..++|++.+++.+...++++++|+++||+|||... ..+..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~--s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGL--GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 5566677777788899999999999999 999999999999999999999999999999985433 222222222
Q ss_pred HHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 009536 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (532)
Q Consensus 168 ~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f 247 (532)
..+..+++++.+++.|+++|.+.+...|...++..++ +++|+++.+....+.++|.+++|++++.+.+..+ ||..|
T Consensus 86 -~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f 161 (382)
T TIGR00902 86 -AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNIL 161 (382)
T ss_pred -HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHH
Confidence 2445678999999999999999988899988887665 4678999999999999999999999999999888 99999
Q ss_pred HhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHH
Q 009536 248 YIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (532)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (532)
++..+..++..+.. .++++++. +++. ++++.......++++|+|.++..
T Consensus 162 ~~~~~~~~~~~~~~-~~~~~~~~---~~~~---------------------------~~~~~~~~~~~~~~l~~~~~~~~ 210 (382)
T TIGR00902 162 AILTAGLAFMLIGF-LIKPTIPP---KDAI---------------------------PEDESQGDSAFIALLKNPMNLRF 210 (382)
T ss_pred HHHHHHHHHHHHHH-HcCCCCCC---Cccc---------------------------cccccccchhHHHHHcChHHHHH
Confidence 88765533333332 33333210 0000 00000112235667777766555
Q ss_pred HHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHH
Q 009536 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLL 405 (532)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 405 (532)
.+...+.. ........+.+.++++.|.+ ..+.......++.+++.++.+++.||+++|+.+.++.++..+...+
T Consensus 211 l~~~~l~~----~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~ 286 (382)
T TIGR00902 211 LAAVCLIQ----GAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAI 286 (382)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 44333322 23444455667777777766 3466666778888899999999999999999999999888888877
Q ss_pred HHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHH-HHHHHHHHHHHHHHHHHHhh
Q 009536 406 VVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFS-VHWVCNFLVGLFFLDLVETF 484 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~g~~i~~~~~g~l~~~~ 484 (532)
+.+.. +.+..+....+-...++. ..+....++.+. |++.++++.++++. ...+|..+++.+.|.++|..
T Consensus 287 ~~~~~--------~~~~~~~~q~l~g~~~~~-~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 287 IGAIE--------AFPLIFLLQILHCGTFAV-CHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred HHhHh--------hHHHHHHHHHHHHHHHHH-HHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76521 112222222333333332 234455677777 88889999999874 56799999999999999999
Q ss_pred CcchhhHhHHHHHHHHHHh
Q 009536 485 GVAPVYAGFGGVSLLSALF 503 (532)
Q Consensus 485 g~~~~~~~~~~~~~~~~~~ 503 (532)
|+ ..|.+.+++.+++.++
T Consensus 357 g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 357 GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred cH-HHHHHHHHHHHHHHHH
Confidence 85 6677777776665443
No 72
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=1.5e-28 Score=239.74 Aligned_cols=351 Identities=15% Similarity=0.114 Sum_probs=243.3
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
.++.+.+..+..++..+......|.+|.+.+++|. ++.+.+++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNV--REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 44556666666667777888888999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009536 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr 244 (532)
+++.+++.++++++.+++.|++.|++.+...+....+..|++++++|+++.++...+..+|..++|.+++.+.+..+ ||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~ 162 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WR 162 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999998888777 99
Q ss_pred HHHHhhHHHHHHHHH-HhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCc
Q 009536 245 TMLYIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (532)
Q Consensus 245 ~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (532)
+.|++.++..++..+ ..++.||+++.. .+ +.+....+++.++++.
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------------------~~~~~~~~~~~~~~~~ 208 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPAD---AR-------------------------------RTRVLASYRTLLSNRR 208 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCccc---cc-------------------------------hhHHHHHHHHHHcChH
Confidence 999998777665443 334556653210 00 0001123344556655
Q ss_pred chHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHH
Q 009536 324 SRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMA 400 (532)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 400 (532)
.+...+..... +........+.+.++++ .+.+ ..++......++.+++..+.+++.||.+++.. .......
T Consensus 209 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--~~~~~~~ 282 (394)
T PRK11652 209 FNCYLLMLIGT----LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW--QSVICCL 282 (394)
T ss_pred HHHHHHHHHHH----HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 54433322221 11222223334445554 4554 33555556677778888888888888873222 2222222
Q ss_pred HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 009536 401 ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 480 (532)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 480 (532)
++.+.+....... ....+.......+...+.+ ...+....+..|..| ++++++.++.+....+|+.+++.+.+.+
T Consensus 283 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 283 LAGLLMWIPGWFG---VMNVWTLLVPAALFFFGAG-MLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred HHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2222222110000 0111112222222222222 234556666677776 4689999999999999999999998877
Q ss_pred HHh
Q 009536 481 VET 483 (532)
Q Consensus 481 ~~~ 483 (532)
.+.
T Consensus 358 ~~~ 360 (394)
T PRK11652 358 PQT 360 (394)
T ss_pred cCC
Confidence 554
No 73
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=1.3e-28 Score=241.82 Aligned_cols=381 Identities=14% Similarity=0.022 Sum_probs=237.1
Q ss_pred HHHHHHHhhhhhhccccccchhHHH-HHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
++.+.+..++..+..+...+.+|.. .+++|+ +..+.|++.+++.++..++++++|+++||+|||++++++..+.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 89 (420)
T PRK09528 12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGL--SGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVL 89 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 3444455566666666667777655 555899 9999999999999999999999999999999999998877666554
Q ss_pred HHHHH---hhhc-----HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 168 AIISA---QAHS-----LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 168 ~~~~~---~a~~-----~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
..... .++. +...++++++.|.+.....+....+..+ . .+++++.++......++|..++|++++.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 167 (420)
T PRK09528 90 FGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI 167 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc
Confidence 43221 1111 1112223333343333333333333222 2 34578888999899999999999999988764
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhh
Q 009536 240 PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (532)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
+ |++.|++.++.+++..+..++.+++++......+. ..+++++.......+.+
T Consensus 168 -~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~l 220 (420)
T PRK09528 168 -N-PQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA-------------------------LGANASAVSLKDALALL 220 (420)
T ss_pred -C-chHhHHHHHHHHHHHHHHHhcccccccchhhhccc-------------------------hhcccccccHHHHHHHc
Confidence 4 99999998888777666665554332210000000 00000111112334566
Q ss_pred cCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHH
Q 009536 320 EEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYL 397 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 397 (532)
+++..+...+..................+...+..+.+.+ ..+.......++..++.++.|++.||+++|+.+..+..
T Consensus 221 ~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 300 (420)
T PRK09528 221 KLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGT 300 (420)
T ss_pred cCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHH
Confidence 7776655443332222211111122233333333222322 33566666778888999999999999999999888888
Q ss_pred HHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHH-HHHHHHHHHHHHHH
Q 009536 398 GMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGF-SFSVHWVCNFLVGL 475 (532)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~i~~~ 475 (532)
+.+++.+++.+. ...+.+.. .....+...+. .+....++.+.+|++.+++..+. .++...+|.++++.
T Consensus 301 l~~~~~~l~~~~---------~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~ 370 (420)
T PRK09528 301 IMAVRIIGSGFA---------TGPLEVSI-LKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLST 370 (420)
T ss_pred HHHHHHHHHHhc---------ccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHH
Confidence 777776666541 11222222 22222222222 23344677788899999988766 67788899999999
Q ss_pred HHHHHHHhhCcchhhHhHHHHHHHHHHhhheeecc
Q 009536 476 FFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 476 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (532)
+.|.+.|..||+..|.+.+++.++..++.++..++
T Consensus 371 ~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 371 LAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998888877776665544443
No 74
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=6e-28 Score=234.69 Aligned_cols=361 Identities=12% Similarity=0.054 Sum_probs=234.1
Q ss_pred HHHHHHhhhhhhccccccchhHH-HHHhhCCCCChhHHHHHHHHHHH-HHHHHHHhhhccccccchhHHH-HHhhHHHHH
Q 009536 90 LIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTF-QIDTIPLIL 166 (532)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~l-~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~ 166 (532)
....+..++..+......|.++. +.+++|. +..+.|++.+.+.+ +..++.++.|+ +||+|||+.+ +.+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHA--RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVL 94 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHH
Confidence 34444567777777777787775 6788999 89999999876655 55566655555 9999999875 556666678
Q ss_pred HHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccc--cchhhHhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009536 167 GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYR--GSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (532)
Q Consensus 167 ~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr 244 (532)
+..+.+++++++.+++.+.+.|...+...+....++.|+.++++| +...++.+.+.++|.++||++++.+.+..+ ||
T Consensus 95 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~ 173 (393)
T PRK15011 95 ACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FT 173 (393)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hH
Confidence 888888999999887665555544567788888888888876655 344578888999999999999999988777 99
Q ss_pred HHHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCc
Q 009536 245 TMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPH 323 (532)
Q Consensus 245 ~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (532)
+.|++.++..++..+.. +++||.++. +++ . +++ .+...++++
T Consensus 174 ~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~-------------------------~~~-------~~~~~~~~~ 216 (393)
T PRK15011 174 VMYLSAAVAFIVCGVMVWLFLPSMRKE---LPL--A-------------------------TGT-------LEAPRRNRR 216 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCccCCC---Ccc--c-------------------------ccc-------ccccccccc
Confidence 99999888777665444 446665320 000 0 000 000001111
Q ss_pred -chHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 324 -SRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
.+..+... ...+........+.|.++++ .+.+ +.+.......++.+++.++.|+++||+++|+.+..+....
T Consensus 217 ~~~~~~~~~----~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~ 292 (393)
T PRK15011 217 DTLLLFVIC----TLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAG 292 (393)
T ss_pred cHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 11111111 11112233334456666543 4554 3455555556677888999999999999998777665544
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLD 479 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 479 (532)
.+.+..+... .+....+....+.....+.. .+....+..|..|+ .++++.++.+...++|..++|.+.|.
T Consensus 293 ~~~~~~~~~~--------~~~~~~l~~~~l~~~~~g~~-~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~ 362 (393)
T PRK15011 293 VCFYAGMLMA--------HSPAILLGLQLLNAIYIGIL-GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGI 362 (393)
T ss_pred HHHHHHHHHH--------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443332220 11111111111111121111 12233556788876 49999999999999999999999999
Q ss_pred HHHhhCcchhhHhHHHHHHHHHHhhh
Q 009536 480 LVETFGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 480 l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
+.|..|++..+.+.+++.+++.++.+
T Consensus 363 i~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 363 VAEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999888877777766665553
No 75
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.3e-29 Score=241.95 Aligned_cols=372 Identities=17% Similarity=0.163 Sum_probs=246.7
Q ss_pred HHHHHHHHHHhhhhhhcccccc-chhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 86 FPHVLIASMSNFLFGYHIGVMN-GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
+.++..+++..+....+...++ ..+..+.+|.+. ...+.+++.++|+++++++.+++|.|.||++..+.+....+++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~--~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKL--VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccch--hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHH
Confidence 3344555555555555554332 333446688887 7888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC------C
Q 009536 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE------D 238 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~ 238 (532)
++..++.....|++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++|++++..+. .
T Consensus 122 ~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 122 GLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 9999888889999999999999999999999999999999999999999999999999999999999988753 2
Q ss_pred CcchhHHHHHhhHHHHHHHH-HHhcccccChh--HHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHh--ccCCCcc
Q 009536 239 DPHWWRTMLYIASLPGFILA-LGMQFTVESPR--WLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKK--DGSDLDS 313 (532)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~-~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 313 (532)
..+ |||.|++.+++.++.. +..+++|++|. ++..+++++-.. ++.+...+. .++.+..
T Consensus 202 ~~g-W~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~----------------~~~~~~~~~~~~~~~~~~ 264 (495)
T KOG2533|consen 202 LAG-WRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVV----------------ERLRESPSGGIENKFKWK 264 (495)
T ss_pred cCC-ceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHH----------------HHHHhccCCCcccccCHH
Confidence 344 9999999999988765 45566888886 221111110000 011111111 1113455
Q ss_pred hhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhc----
Q 009536 314 QWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKE---- 386 (532)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~---- 386 (532)
.+++.+++|..|...+.. ++.....+.+.+++|.++.+ .+.+ ++..+.++..++++++.+++|+++||.
T Consensus 265 ~~~~a~~dp~vw~~~l~~----~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~ 340 (495)
T KOG2533|consen 265 GFKEALKDPGVWPFSLCY----FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF 340 (495)
T ss_pred HHHHHHhchhHHHHHHHH----HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH
Confidence 677888888766554443 33344666788888998887 2343 567888899999999999999999994
Q ss_pred CCchhhhhhHHHHHH-HHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcc-ccchhHHHHH
Q 009536 387 GRQKLLIGSYLGMAI-SMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNR-TRGKIMGFSF 463 (532)
Q Consensus 387 g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~g~~~ 463 (532)
.+|........+..+ +...+.. ..........++.+.++... .+......++....+ ++-+..+...
T Consensus 341 ~~~~~~~~~~~~~~~~g~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i 410 (495)
T KOG2533|consen 341 ARRLLFIVFLCLYAIIGAISLLA----------AAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAII 410 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----------hccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhh
Confidence 444444333333222 2222222 11111222222222222222 244445555555443 3444444444
Q ss_pred HHHHHHHHHHHHHHHHH-HHhhCcchhh
Q 009536 464 SVHWVCNFLVGLFFLDL-VETFGVAPVY 490 (532)
Q Consensus 464 ~~~~~g~~i~~~~~g~l-~~~~g~~~~~ 490 (532)
...+.++.++|.+.-.. ...+++...|
T Consensus 411 ~~~~s~~~~~~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 411 DGTGSAGAISGQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred cchhHHHHhhhhhcccccCcchhhhhHH
Confidence 44455555544443322 2334666666
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=3.4e-28 Score=237.14 Aligned_cols=373 Identities=14% Similarity=0.085 Sum_probs=248.4
Q ss_pred HHHHhhhhhhccccccchh-HHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccch-hHHHHHhhHHHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDTIPLILGAI 169 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~ 169 (532)
+++..+.......+..|.+ +.+.+++|+ +..++|++.+++.++..++++++|+++||+|| |+++.++.++.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHF--SGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 3444555566666664444 566777898 99999999999999999999999999999965 8888989999989998
Q ss_pred HHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhh--------hcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcc
Q 009536 170 ISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYIS--------EVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (532)
Q Consensus 170 ~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 241 (532)
++.+.++++.+++.|++.|++.+...+...++.. |......|.+..| .+|.++++.+++.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~ 158 (418)
T TIGR00889 85 FAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS 158 (418)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch
Confidence 9999999999999999999987777766655432 2222234555555 3577777777776633323
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcC
Q 009536 242 WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEE 321 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
|+. |++.++..++..+..+++||+|+. +++++. + .++ ......++++|+
T Consensus 159 -~~~-f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~-------------------~----~~~---~~~~~~~~~~k~ 207 (418)
T TIGR00889 159 -NIQ-LYITAGSSALLGVFALTLPDIPVA---KSTAKM-------------------S----IKV---MLGLDAFILFKN 207 (418)
T ss_pred -hHH-HHHHHHHHHHHHHHHhcCCCCCCC---cccccc-------------------C----HHH---HhhhhHHHHhcC
Confidence 554 445555555555556677776531 000000 0 000 001123456677
Q ss_pred CcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCC----------ChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchh
Q 009536 322 PHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGI----------TDGALASLLVGVTNFAGALCASYLMDKEGRQKL 391 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 391 (532)
+.++..++..++... .......+.+.+.++.+. +..+.......+..+++.+..|++.||+|+|++
T Consensus 208 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~ 283 (418)
T TIGR00889 208 KRMAIFFFFSMLLGA----PLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV 283 (418)
T ss_pred CCeeeHHHHHHHHHh----HHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 766554444333322 122233444555555542 233666777778888999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHH-HHHHHH
Q 009536 392 LIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSF-SVHWVC 469 (532)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g 469 (532)
+..+.++.+++..++..... ............+..+.+.+ ..+....++.|.+|++.|++++|+.+ ....+|
T Consensus 284 l~~~~~~~~v~~~l~~~~~~------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg 357 (418)
T TIGR00889 284 MLLSLVAWALRFGFFAYGDP------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFG 357 (418)
T ss_pred HHHHHHHHHHHHHHHHHcCc------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhH
Confidence 99988888777655544100 01111222222222222222 23555677889999999999999997 567899
Q ss_pred HHHHHHHHHHHHHhh------CcchhhHhHHHHHHHHHHhhheeeccCCC
Q 009536 470 NFLVGLFFLDLVETF------GVAPVYAGFGGVSLLSALFAYYFIVETKG 513 (532)
Q Consensus 470 ~~i~~~~~g~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (532)
.++||.+.|.+.|.. ||+..|.+.+++.++++++.+++.+++++
T Consensus 358 ~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 358 SLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999984 47888888888888887777777776644
No 77
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=1.3e-28 Score=238.18 Aligned_cols=346 Identities=19% Similarity=0.194 Sum_probs=229.5
Q ss_pred HHHHHHHhhhhhhccccccchhHH-HHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
.+..+++.+..........+.+|. +++++|+ +..+.+++.+++.+++.+++++.|+++||+|||+.++++.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGL--STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP 80 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCC--CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 345666677777788888999995 9999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC--------
Q 009536 168 AIISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-------- 238 (532)
Q Consensus 168 ~~~~~~a~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------- 238 (532)
.+++++++ +++.+++.|+++|++.+ ..+....++.|++|+++|++++++.....++|..+++.+++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 159 (366)
T TIGR00886 81 CLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGL 159 (366)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999 99999999999999966 456678899999999999999999987777777777666654432
Q ss_pred --CcchhHHHHH-hhHHHHHHH-HHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcch
Q 009536 239 --DPHWWRTMLY-IASLPGFIL-ALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ 314 (532)
Q Consensus 239 --~~~~wr~~f~-~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (532)
..+ ||+.|+ ..++..++. .+...+.+|+|+... +.++.. ..+... ..+++....
T Consensus 160 ~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~-------------~~~~~~~~~ 217 (366)
T TIGR00886 160 PAHLA-WGWAFVIVPAGILLLPALLIFFVGADTPPGKP---ATGKLS-----FKGARW-------------SVGTGALGD 217 (366)
T ss_pred ccccc-ccchhHHHHHHHHHHHHHHHHHhcccCCcccc---cchhcc-----cccccc-------------cccchhHHH
Confidence 224 999994 434444333 333444555543100 000000 000000 000000113
Q ss_pred hhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchh
Q 009536 315 WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKL 391 (532)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 391 (532)
..+.++++..+...+..... .........+.+.++++ .+.+ +.+.......+..++++++.|++.||+++|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 218 QLKVFRDRHTWILALLYSVT----FGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK 293 (366)
T ss_pred HHHHHhccchhhHHHHHHHH----HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh
Confidence 34556666554433332222 22233444556666654 3544 45666777788889999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHH
Q 009536 392 LIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVC 469 (532)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 469 (532)
+..+.....++..++..... ...+.........+.....+.+ .+..+....+..| +++|+++|+.+.+.++|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 294 LLMSFLGVAMGAFLVVLGLV----SPLSLAVFIVLFVALFFFSGAG-NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHHHhcCC----CcchHHHHHHHHHHHHHHhccc-cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 77776665555554443211 0001111112222222222222 2345567778777 57999999999887765
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=2.4e-27 Score=229.74 Aligned_cols=353 Identities=15% Similarity=0.048 Sum_probs=242.3
Q ss_pred hhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchh----HHHHHhhHHHHHHHHHH
Q 009536 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR----RTFQIDTIPLILGAIIS 171 (532)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~~~~~ 171 (532)
.+......+.+.|.+|.+.+|+|. +..++|++.+++.++..++++++|+++||+||| +.+.++..+. ....+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~--s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGY--TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCC--CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 455556678888999999999999 999999999999999999999999999999984 3333222222 22334
Q ss_pred HhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhH
Q 009536 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (532)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~ 251 (532)
..+++++.+++.|++.|++.+...+...+++.++ +++|+++.+....+.++|.++||++++++.++.+ ||..|++.+
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~ 165 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILT 165 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHH
Confidence 4468899999999999999998999888887776 4568899999999999999999999999998888 999999877
Q ss_pred HHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHH
Q 009536 252 LPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGG 331 (532)
Q Consensus 252 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (532)
+..++..+...+.||+++ +++. ++..++...++++++|++..+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~---------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~ 214 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGES---------------------------RQQESAGWPAWKALLKEPTVWRFLLCV 214 (382)
T ss_pred HHHHHHHHHHHccCCCCC----cccc---------------------------ccccccccchHHHHHcChhHHHHHHHH
Confidence 655554444444443211 0000 000001123567788887766554443
Q ss_pred HHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHH
Q 009536 332 ALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGA 409 (532)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 409 (532)
++... .......+.+.+.++.+.+ ..+.......++.++..++.+++.||+++|+.+..+..+.+++.+++...
T Consensus 215 ~l~~~----~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T PRK11128 215 SLLQG----SHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST 290 (382)
T ss_pred HHHHH----HhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 33322 2223334455666666665 34666666677888888999999999999999888888777776655441
Q ss_pred hcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHH-HHHHHHHHHHHHHHHHHHHhhCcch
Q 009536 410 TSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSF-SVHWVCNFLVGLFFLDLVETFGVAP 488 (532)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~i~~~~~g~l~~~~g~~~ 488 (532)
.+.+..+...++...+++. ..+....+..+. +++++++..++.+ ....+|..++|.+.|.+.|..|+ .
T Consensus 291 --------~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~ 359 (382)
T PRK11128 291 --------TALPWLIVIQILHCGTFTV-CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-G 359 (382)
T ss_pred --------hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-H
Confidence 1222222222222222222 234444556665 5555788899886 44567778999999999999886 4
Q ss_pred hhHhHHHHHHHHH
Q 009536 489 VYAGFGGVSLLSA 501 (532)
Q Consensus 489 ~~~~~~~~~~~~~ 501 (532)
.++..+++.+++.
T Consensus 360 ~~~~~~~~~~~~~ 372 (382)
T PRK11128 360 VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 5655555554443
No 79
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.5e-29 Score=226.18 Aligned_cols=344 Identities=15% Similarity=0.095 Sum_probs=248.0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhh
Q 009536 119 FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLV 198 (532)
Q Consensus 119 ~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~ 198 (532)
.+.+++++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++++...++++++.++|++++++|.+||+|.++..++.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 33467789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhcCCcc-cccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCCh
Q 009536 199 PIYISEVAPTK-YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGML 277 (532)
Q Consensus 199 ~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 277 (532)
.++++|.+|++ ||++++|+...+.++|..+||.+||.+.+..| .+.+|.+.++++++...+.+++.|..+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~~-------- 251 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPTE-------- 251 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCccc--------
Confidence 99999999965 57999999999999999999999999999998 999999999999998777777665421
Q ss_pred hHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcC
Q 009536 278 NDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVG 357 (532)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (532)
.+++...+..++.+++++|..+.... ...+.+......-+.+...+.+++.
T Consensus 252 --------------------------~~~~~~~~~~~~~~Ll~dP~I~~~ag---ai~~~n~~lafLePtlslwm~e~m~ 302 (464)
T KOG3764|consen 252 --------------------------MDPDSTEQGTPMWSLLMDPYILLIAG---AITFSNSSLAFLEPTLSLWMLETMF 302 (464)
T ss_pred --------------------------cCccccccCccHHHHHhCchHhhhhc---chhhccchHHHhCcccHHHHHHhcc
Confidence 01112233456777888886443222 1222222222222333333445554
Q ss_pred CC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhh--hhhHHHHHHHHHHHHHHhcCCCCccchh-hHHHHHHHHHHH
Q 009536 358 IT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLL--IGSYLGMAISMLLVVGATSLPLDEDFSH-NLSILGTLFYIF 432 (532)
Q Consensus 358 ~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 432 (532)
.. +.++.++...+...++..+.|.+.||++.-+.+ ..+.+..++++....++. .... +.......+.+.
T Consensus 303 ~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~------~~~~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 303 TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT------SIAQLWVPNFGLGFGIG 376 (464)
T ss_pred CCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh------hHHHHhhhhHHHHHHHH
Confidence 22 457788888899999999999999999944333 333333333333222211 1111 111111111111
Q ss_pred HHhcccccccccccccccCcc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhhee
Q 009536 433 TFAIGAGPVTGLVIPELSSNR---TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYF 507 (532)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
.......|.. .+..+.-..+ ..|.++++......+|.++||.+.|.+++.+|+++...+.+...++..-++.++
T Consensus 377 ~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 377 LADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112223433 2223332233 678999999999999999999999999999999999888888888776665443
No 80
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5.2e-29 Score=243.43 Aligned_cols=402 Identities=17% Similarity=0.168 Sum_probs=284.0
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
.|.+++...+......-....++...+.++++++. +..+++|+.++......+.+++.+.+.||||.|.+.+.|.++.
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~--s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~ 121 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGS--SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVA 121 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCC--CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHH
Confidence 45556666566665555566677888999999998 7888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHH-HHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 165 ILGAIISAQAHSLDEMLWG-RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~-r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
.++.++.+++++++++++. -++.|+|.|..+.....++..||++| |+.+.|+...+.++|.++-|.+...+.+..| |
T Consensus 122 ~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~ 199 (509)
T KOG2504|consen 122 ALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSKYG-W 199 (509)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHHhC-c
Confidence 9999999999999988775 69999999999999999999888766 9999999999999999999999999999998 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHH-----------HcCCcchHH------HHHHHHHHHHh
Q 009536 244 RTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIAN-----------LWGESEINK------AIEEFQLVIKK 306 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~------~~~~~~~~~~~ 306 (532)
|+.+++.+.+.+-.++....+.+.+.....+ .++..+.... ......... .....+...++
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDK 277 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCcc
Confidence 9999998888876655554444321110000 0000000000 000000000 00000000000
Q ss_pred cc-CCCcch----hhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhh
Q 009536 307 DG-SDLDSQ----WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCA 379 (532)
Q Consensus 307 ~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 379 (532)
.. ...+.. ..++++++.+... .+...+....+.....+++.+..+.+.+ ++.....+.++..++++++.
T Consensus 278 ~~~~~~~~~~~~~d~~ll~~~~fl~~----~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~ 353 (509)
T KOG2504|consen 278 WRNSPLQAFLSMLDLSLLKDPKFLLL----ALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIIL 353 (509)
T ss_pred ccccchhhhhhhhhHHHHcCchHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhh
Confidence 00 011111 1466677544333 3333344446667777888888877776 45777888899999999999
Q ss_pred HhhhhhcCCc--hhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccc
Q 009536 380 SYLMDKEGRQ--KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRG 456 (532)
Q Consensus 380 g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 456 (532)
|++.|+...+ .+..++.++.+++...+.+. ... ..+.......++..+. ......++.|+.+.++..
T Consensus 354 G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~---------~~~-~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~ 423 (509)
T KOG2504|consen 354 GLLADKPGIRALVLFLLTLLIAGLARLFLPFA---------TTY-VGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLS 423 (509)
T ss_pred hhhcCccccchHHHHHHHHHHHHHHHHHHHHh---------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcc
Confidence 9999998743 34455555555555444331 222 3333333334444444 344446788999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchhhHhHHHHHHHHHHhhhe
Q 009536 457 KIMGFSFSVHWVCNFLVGLFFLDLVETFG-VAPVYAGFGGVSLLSALFAYY 506 (532)
Q Consensus 457 ~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 506 (532)
.++|+...+..++..+||++.|.+.|..| |...|...+++.+++....++
T Consensus 424 ~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 424 NAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred hHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHH
Confidence 99999999999999999999999999988 888898888888877765543
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=4.8e-27 Score=228.99 Aligned_cols=376 Identities=12% Similarity=0.025 Sum_probs=244.8
Q ss_pred HHHHHHHhhhhhhccccccchhHHH-HHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
++.+....++.......+.|.+|.+ .+++|. +..+.|++.+++.++..++++++|+++||+|||+.++.++...+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGL--SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4455566677777777788888765 556898 9999999999999999999999999999999999999887776654
Q ss_pred HHHHH---hh-----hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 168 AIISA---QA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 168 ~~~~~---~a-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
..... +. +.+..+++.|++.|++.+...+....+..|.. +++++..+......++|.++||.+++.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 159 (396)
T TIGR00882 82 FAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI 159 (396)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc
Confidence 43321 11 12334566788899988888888887777643 3345677888888899999999999988654
Q ss_pred cchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhh
Q 009536 240 PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (532)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
+ ||+.|++.+++.++..+..++.+++++. ++ +.. + ..+.++.+....+.++++
T Consensus 160 -~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~-----------------~--~~~~~~~~~~~~~~~~~l 212 (396)
T TIGR00882 160 -D-PQIVFWLGSGFALILMLLLMFAKPKAPS--SA----TVA-----------------N--ALGANASAFSLKLALELF 212 (396)
T ss_pred -C-chHHHHHHHHHHHHHHHHHHHhCCCCch--hh----hhh-----------------c--ccccccCCCCHHHHHHHH
Confidence 5 9999999888887766555443333210 00 000 0 000001111123456777
Q ss_pred cCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHH
Q 009536 320 EEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYL 397 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 397 (532)
+++..+...+..................|...++.+.+.+ ..+.......+...++.+..+++.||+++|+.+.++..
T Consensus 213 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~ 292 (396)
T TIGR00882 213 RQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGT 292 (396)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 7776554433222221111111112223333322211222 33556666677788888999999999999999888887
Q ss_pred HHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHH-HHHHHHHHHHHHHH
Q 009536 398 GMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGF-SFSVHWVCNFLVGL 475 (532)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~i~~~ 475 (532)
+.++...+.... .+.+..... ....+.+... ......+..+..|++.++++.+. .+....+|+++++.
T Consensus 293 l~~l~~~~~~~~--------~~~~~~~~~--~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~ 362 (396)
T TIGR00882 293 IMSVRIIGSSFA--------TTALEVVIL--KMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLST 362 (396)
T ss_pred HHHHHHHHHHhc--------CChHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHH
Confidence 777766554431 111222222 2222222111 12233455666788888887766 67889999999999
Q ss_pred HHHHHHHhhCcchhhHhHHHHHHHHHHhhh
Q 009536 476 FFLDLVETFGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 476 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
+.|.+.|..|+...|.+.+++.++..+...
T Consensus 363 l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 363 LAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred hHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888777766543
No 82
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=3.9e-27 Score=229.88 Aligned_cols=366 Identities=15% Similarity=0.086 Sum_probs=248.1
Q ss_pred HHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-----chhH-HHHHhhHHHHH
Q 009536 93 SMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRR-TFQIDTIPLIL 166 (532)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~~~~~ 166 (532)
...++..+...+.....+|.+.++.|+ +..++|++..+... .+..+++|+++||+ |||| .++++.++.++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~--~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGL--DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 344567778888888999999999999 99999999777765 59999999999999 8765 78888888888
Q ss_pred HHHHHHhh---hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc-ch
Q 009536 167 GAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP-HW 242 (532)
Q Consensus 167 ~~~~~~~a---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~ 242 (532)
+..+.++. .+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+.. +
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g- 159 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG- 159 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-
Confidence 88887776 357788888888899999999999999999999999999999999999999999999988887753 6
Q ss_pred hHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCC
Q 009536 243 WRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (532)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
||..|++.++..++..+..++.+|+++. +++.++. . ++....+++++++|
T Consensus 160 w~~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~~--------------------~-------~~~~~~~~~l~~~~ 209 (402)
T PRK11902 160 WGNTYLLMAGLMLAGALTTLWAPEPEVP---ARPPRSL--------------------G-------EAVVGPLRDFFSRR 209 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccc---ccccchh--------------------H-------HHHHHHHHHHHhCc
Confidence 9999999888777665555556654321 0000000 0 00112456677787
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh--HHHHHHHH-HHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVG-VTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
.++..+....+......... ....+.+.++.|.+.. ++.....+ ++.+++.++.+++.||+++|+.+..+..+.
T Consensus 210 ~~~~~l~~~~l~~~~~~~~~---~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~ 286 (402)
T PRK11902 210 GAWALLLLIVLYKLGDAFAG---SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQ 286 (402)
T ss_pred CHHHHHHHHHHHHhHHHHHH---HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 76665544333322211111 1222334445666543 44443333 457889999999999999998877666665
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHH--HHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLF--YIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLF 476 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~ 476 (532)
.+..+.+......+ .+.+.......+ +..+...+ .......++.+.+|.+ ..++.+....++..+++.+
T Consensus 287 ~l~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~ 358 (402)
T PRK11902 287 AVSNLGYWVLAVTP----KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPT 358 (402)
T ss_pred HHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHH
Confidence 55544332211110 111111111111 11222221 1234445556665544 4566666677888877889
Q ss_pred HHHHHHhhCcchhhHhHHHHHHHHHHhh
Q 009536 477 FLDLVETFGVAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 477 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 504 (532)
.|.+.|..||...|.+.+.+++++.++.
T Consensus 359 ~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 359 SGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 9999999999998988887777766554
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=1.2e-26 Score=256.86 Aligned_cols=366 Identities=16% Similarity=0.046 Sum_probs=241.2
Q ss_pred HHhhhhhhcc-ccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHH
Q 009536 94 MSNFLFGYHI-GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (532)
Q Consensus 94 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 172 (532)
++.++..+.. .......+.+..+++.+.+....+++.+++.+++.++++++|+++||+|||++++++.++.+++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~ 95 (1146)
T PRK08633 16 LTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIV 95 (1146)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 3444433333 333444556667777744556689999999999999999999999999999999999877666555544
Q ss_pred ---hhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC--------cc
Q 009536 173 ---QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD--------PH 241 (532)
Q Consensus 173 ---~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~~ 241 (532)
.+++++.++++|+++|++.+...++..+++.|++|+++|++++++...+..+|.++|+++++++... .+
T Consensus 96 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~ 175 (1146)
T PRK08633 96 LAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEIL 175 (1146)
T ss_pred HHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 4578999999999999999999999999999999999999999999999999999999999988765 23
Q ss_pred hhHHHHHhhHHH-HHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhc
Q 009536 242 WWRTMLYIASLP-GFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLE 320 (532)
Q Consensus 242 ~wr~~f~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (532)
+|++.+.+.++. .++.+++.+.+++.|+....+.+... .. ........++.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~---------------~~~~~~~~~~~l~~ 230 (1146)
T PRK08633 176 GRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK----------YL---------------FPKLLWRNLKLLRS 230 (1146)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc----------cc---------------cHHHHHHHHHHHhc
Confidence 355555443333 33344445556766532111000000 00 00000123445566
Q ss_pred CCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC---hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhH
Q 009536 321 EPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT---DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSY 396 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 396 (532)
++..+..++...+..+ .......+.+.++. ..+.+ ..++......++.+++.++.+++.||+++++.+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~ 306 (1146)
T PRK08633 231 DRVLWLAIIGLSYFWF----ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGA 306 (1146)
T ss_pred CcHHHHHHHHHHHHHH----HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHH
Confidence 6655544333333222 22223334444443 34544 3467777788899999999999999999988887777
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHH
Q 009536 397 LGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 475 (532)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~ 475 (532)
++.+++.+++.+. ... ....+..+..+++.+ ..+...+++.+..|++.||+++|+.+++.++|.++++.
T Consensus 307 ~~~~~~~~~~~~~---------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~ 376 (1146)
T PRK08633 307 LGLALSLFLLPTA---------PSL-ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLA 376 (1146)
T ss_pred HHHHHHHHHHHHh---------hhH-HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHH
Confidence 7776666655541 112 222222222333333 23445678889999999999999999999999988877
Q ss_pred HHHHHHHhhC--cchhhHhHHHHHHH
Q 009536 476 FFLDLVETFG--VAPVYAGFGGVSLL 499 (532)
Q Consensus 476 ~~g~l~~~~g--~~~~~~~~~~~~~~ 499 (532)
+.+.+.. .+ +...+++.+.+.++
T Consensus 377 ~~~~l~~-~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 377 LTTLFSG-LGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHH-hccCHHHHHHHHHHHHHH
Confidence 7665543 33 33344444444333
No 84
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=1e-26 Score=228.50 Aligned_cols=372 Identities=20% Similarity=0.156 Sum_probs=271.5
Q ss_pred HHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
.+..+.++.++..++..+....++-+..+..- |+...+++..+..+...+.++++|.++||++||++++.+.++.++.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~--S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVTQLTG--SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Confidence 35556677778888888888888877777654 8999999999999999999999999999999999999999888766
Q ss_pred HHHHHhh-----hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcch
Q 009536 168 AIISAQA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (532)
Q Consensus 168 ~~~~~~a-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 242 (532)
.++.++. .+.+.+++.-++.|++.+...|+.++++.|..|+++...++++.+...++..++||.++|.+....|
T Consensus 89 ~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G- 167 (524)
T PF05977_consen 89 ALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG- 167 (524)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-
Confidence 5555432 4788899999999999999999999999999999999999999999999999999999999988777
Q ss_pred hHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCC
Q 009536 243 WRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (532)
Q Consensus 243 wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
-.+.|++.++..++.++.....+++++ .+... . +.-.+..+..++.+.+++
T Consensus 168 ~~~~f~inalsfl~~i~~l~~~~~~~~---~~~~~--~------------------------e~~~~~l~~G~ryv~~~~ 218 (524)
T PF05977_consen 168 AAAAFLINALSFLISILALLRWKPPPP---PSSLP--R------------------------ERFFSALREGLRYVRSSP 218 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccc---ccccc--h------------------------hhhhhhHHHHHHHHhcch
Confidence 788888877766555444433332211 00000 0 000011122344444455
Q ss_pred cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHH
Q 009536 323 HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
..+..++...++.+ ........+|.+.++ .+.+ ..++.....+++.++|.++.+++.+|+++++++..+.++.
T Consensus 219 ~l~~~l~~~~~~~l----~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~ 294 (524)
T PF05977_consen 219 PLRSVLLRSFLFNL----FASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLF 294 (524)
T ss_pred HHHHHHHHHHHHHH----hhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHH
Confidence 54443333222222 122233345666544 3433 4477888899999999999999999999998888888877
Q ss_pred HHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 400 AISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
+++++.+.+ ....++....++..+.+. .......+..++..|++.||+++++++++...+..+|..+.|
T Consensus 295 a~~~~~lal----------~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G 364 (524)
T PF05977_consen 295 ALALLLLAL----------SPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWG 364 (524)
T ss_pred HHHHHHHhc----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776666 222222233333333332 233455677889999999999999999999999999999999
Q ss_pred HHHHhhCcchhhHhHHHHHHHHHHhhh
Q 009536 479 DLVETFGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
.+.+..|....+.+.++..+++.++.+
T Consensus 365 ~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 365 FLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888777766655555543
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=9.9e-27 Score=256.43 Aligned_cols=344 Identities=16% Similarity=0.053 Sum_probs=231.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHH---hhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhH
Q 009536 124 ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI---DTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPI 200 (532)
Q Consensus 124 ~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~ 200 (532)
...++..+++.+++.++++++|+++||+|||+++.. ..++..+..+.+...+++++++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 567889999999999999999999999999997643 22333333333344589999999999999999999999999
Q ss_pred hhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHH
Q 009536 201 YISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDA 280 (532)
Q Consensus 201 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 280 (532)
++.+++++++|++++++.+++.++|.++||++++++....+ |++.|++.++..++.+++.+++++++.. .++...+.
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 208 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIPKTGNA--APDLKIDR 208 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeecc
Confidence 99999999999999999999999999999999999988877 9999966666666666666666655320 00000000
Q ss_pred HHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CCC
Q 009536 281 KAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GIT 359 (532)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 359 (532)
... ......++.+.+++.++...+...+..+ .......+.|.++++. +.+
T Consensus 209 ------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~~ 259 (1140)
T PRK06814 209 ------------------NII-------RSTITLLKYAKADKRIWLAILGISWFWL----VGAVVLSQLPLLAKETLGGD 259 (1140)
T ss_pred ------------------chH-------HHHHHHHHHHhcCchHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHcCCc
Confidence 000 0001235556666665554444333322 2233344566666543 443
Q ss_pred --hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCC------------CCccchhhHHHH
Q 009536 360 --DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLP------------LDEDFSHNLSIL 425 (532)
Q Consensus 360 --~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 425 (532)
..++.....+++.+++.++.|++.|+..+++.+..+.++.+++.+.+.+..... .....+.+ . +
T Consensus 260 ~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 337 (1140)
T PRK06814 260 ENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW-R-I 337 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH-H-H
Confidence 457778888999999999999999887777666555555554444333310000 00001112 2 2
Q ss_pred HHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh-hCcchhhHhHHHHHHHHH
Q 009536 426 GTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET-FGVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 426 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~ 501 (532)
.+..+..+++.+ ..+...+++.+..|++.+|+++|+.+++.+++..+++.+.+.+.+. .++...+++.+++.++.+
T Consensus 338 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 338 LIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 222222233322 3345678889999999999999999999999999999999988753 345555554444433333
No 86
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.2e-26 Score=209.38 Aligned_cols=362 Identities=17% Similarity=0.144 Sum_probs=276.0
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
++.++...++.++......+.+|.+++.|++ +..+.+++...++.++.+.+++.|++.+|+|+|+.+++|+.++++++
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~l--s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDL--TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCc--cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 5666667788899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHH---hhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC------
Q 009536 169 IISA---QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD------ 239 (532)
Q Consensus 169 ~~~~---~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------ 239 (532)
.++. ...+|..++++-++.|.|.+...++++.++....++++-.+.+++.+..+++|.+++|++++.+...
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 9985 4578899999999999999999999999999999998899999999999999999999999988762
Q ss_pred ------------cchhHHHHHhhHHHHHHHHHHhccc--ccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHH
Q 009536 240 ------------PHWWRTMLYIASLPGFILALGMQFT--VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIK 305 (532)
Q Consensus 240 ------------~~~wr~~f~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (532)
...||++|...+...+++.+..... |+.+. ...
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~---------------------------------~~~ 219 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV---------------------------------AAP 219 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc---------------------------------ccc
Confidence 1128888888877777666555443 33211 000
Q ss_pred hccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhh
Q 009536 306 KDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYL 382 (532)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l 382 (532)
+..+.......+++++++.+...+..+++.. .......+++.++.+ .+.+ ++......+..+.++|++++-++
T Consensus 220 ~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG----~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~l 295 (422)
T COG0738 220 SLGASGSAGLSSLFQNKHLRLGVLAIFLYVG----AEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSAL 295 (422)
T ss_pred cccccccchHHHHHhChHHHHHHHHHHHHHh----HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111256778888887766655555544 344455566666666 4444 55777788899999999999999
Q ss_pred hhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHH
Q 009536 383 MDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFS 462 (532)
Q Consensus 383 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 462 (532)
..|+...+.+....++..+.++...+. +. ...+...+..+.+.....|..++...+..| + .....|..
T Consensus 296 m~~~~~~k~Laf~a~~~ill~~~~~l~---------~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~-~ts~~s~~ 363 (422)
T COG0738 296 MSRIKPEKYLAFYALIAILLLLAVALI---------GG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-E-HTSVGSGL 363 (422)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHh---------cC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-c-ccccccee
Confidence 999999998887776666655555552 22 333333444444455567888888888888 3 33444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHH
Q 009536 463 FSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 463 ~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (532)
..+.-+|+++.|++.|++.|..|....+.....+|.+..
T Consensus 364 l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 364 LVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred eeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 567779999999999999999997777664444444444
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.7e-26 Score=226.65 Aligned_cols=411 Identities=12% Similarity=0.036 Sum_probs=249.0
Q ss_pred HHHHHHHHHhhhhhhccccccchh-HHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc-cchhHHHHHhhHHH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPL 164 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~ 164 (532)
+.++.+++..+...+......+.+ ..+.+++|. +..+.+++.+.|.....+..+++|+++|| +|||++++++.+++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~--~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGF--SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVL 91 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHH
Confidence 335555566666666665444444 566788998 88888999999998999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhcHHH-HHHHHHHHhhhhhhhhhhhhHhhhhcCCcc--cccchhhHhHHHHHHHHHHHHHhcCCCCCCcc
Q 009536 165 ILGAIISAQAHSLDE-MLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~-l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 241 (532)
+++.+.++++.+... ++++|+++|+|.|...+...+++.|.+|++ +|++++++++.+.++|.++||.+++++.++.+
T Consensus 92 ~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 92 AIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999876554 558999999999999999999999999877 45889999999999999999999999999888
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccccChhHHh--hcCChhHHHHHHH------------HHcCCcchHHHHHHHH------
Q 009536 242 WWRTMLYIASLPGFILALGMQFTVESPRWLC--KGGMLNDAKAVIA------------NLWGESEINKAIEEFQ------ 301 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~------ 301 (532)
||+.|++.++..++.++...+.++..+... .+++..+...... ................
T Consensus 172 -w~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (489)
T PRK10207 172 -YSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVT 250 (489)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 999999865533333333333321111000 0010011101000 0000000000000000
Q ss_pred -HHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC------hhHHHHHHHHHHHH
Q 009536 302 -LVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT------DGALASLLVGVTNF 373 (532)
Q Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 373 (532)
.-..++.+. .+.+|++.+....+ ++.....+..+.......+.+.++ .+.. ..........+..+
T Consensus 251 ~~f~~~~~~~-----~~~~r~r~~~~~~l--~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~ii 323 (489)
T PRK10207 251 IIFFREAFKL-----DKTGRNKMFVAFVL--MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVV 323 (489)
T ss_pred HHHHHHHhcC-----CHHHHHHHHHHHHH--HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHH
Confidence 000001111 12333332222111 111122222222332334444442 2221 22334444455666
Q ss_pred HHhhhhHhhhhhcCCchh-------hhhhHHHHHHHHHHHHHHhc-CCCCccchhhHHHHHHHHHHHHHhcccccccccc
Q 009536 374 AGALCASYLMDKEGRQKL-------LIGSYLGMAISMLLVVGATS-LPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLV 445 (532)
Q Consensus 374 ~~~~~~g~l~d~~g~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (532)
+..++.+++.||+++|+. +.++.++.+++++.+..... ........+.+++....++.........+.....
T Consensus 324 i~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~ 403 (489)
T PRK10207 324 VASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAM 403 (489)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 777888999999998873 66777777777654432111 1101111222333333333222223345666788
Q ss_pred cccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH----------hhCcchhhHhHHHHHHHHHHhhhee
Q 009536 446 IPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE----------TFGVAPVYAGFGGVSLLSALFAYYF 507 (532)
Q Consensus 446 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (532)
+.+..|++.+|.++|+.+...++|+.++..+...... ...+...|...++..++..++.++.
T Consensus 404 ~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 404 IAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999888764421 1124556666666666655555443
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=3.4e-25 Score=216.47 Aligned_cols=375 Identities=16% Similarity=0.127 Sum_probs=233.6
Q ss_pred HHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (532)
.++......+.....+..++.+..|+|- .....|+.+.+.++..++.++.|+++|.||||.+++.+.++..+|.+++
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~---~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~ 125 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGG---SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC 125 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCC---CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh
Confidence 3333344455566667788999999984 4567899999999999999999999999999999999999999999999
Q ss_pred HhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhH
Q 009536 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (532)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~ 251 (532)
+.++|...++++..+.|+|.|.... ....++|..|.|.|....++......+....++.++..+..+.+ |||.|++.+
T Consensus 126 atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~~~~ 203 (599)
T PF06609_consen 126 ATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFYIFI 203 (599)
T ss_pred hcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHHHHH
Confidence 9999999999999999999887765 45568999999999887777766655555567777766665556 999999998
Q ss_pred HHHHHHHHHhcccccChhHHhhcCCh---hHHHHHHHHH------------------cCCc-c---hHHHHHHH------
Q 009536 252 LPGFILALGMQFTVESPRWLCKGGML---NDAKAVIANL------------------WGES-E---INKAIEEF------ 300 (532)
Q Consensus 252 ~~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~------------------~~~~-~---~~~~~~~~------ 300 (532)
+...+.++..+++..+|++-..+++. .+..+.++.+ .+.. . ........
T Consensus 204 i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~ 283 (599)
T PF06609_consen 204 IWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVL 283 (599)
T ss_pred HHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHH
Confidence 88777655544444444433222221 1111111111 0100 0 00000000
Q ss_pred --HHHHHhc--cCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC-----hhHHHHHHHHH
Q 009536 301 --QLVIKKD--GSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT-----DGALASLLVGV 370 (532)
Q Consensus 301 --~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~ 370 (532)
.-...+. ..+...-..+++++++. +...++..+.....+.....+.|..... ++.+ ..++.....++
T Consensus 284 Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~---~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~f 360 (599)
T PF06609_consen 284 LVAFVVWEWFGAPKDPLFPHRLFKDRRG---FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGF 360 (599)
T ss_pred HHHHHHhhhhccCCCCcCCHHHhccchH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHH
Confidence 0000111 11122234456665432 2222222222222223333333333222 2222 34567777888
Q ss_pred HHHHHhhhhHhhhhhcCCchhh-hhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccc
Q 009536 371 TNFAGALCASYLMDKEGRQKLL-IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPEL 449 (532)
Q Consensus 371 ~~~~~~~~~g~l~d~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (532)
+..++.++.|.+..++++-|.. +++..++.+++.++..... .+....+....+...+.+... .......+-.
T Consensus 361 g~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~------~n~~~~i~~~~l~g~giG~~~-~~~~~~~ql~ 433 (599)
T PF06609_consen 361 GSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRP------DNKNAAIAFLVLAGFGIGGIL-VPAIVIAQLI 433 (599)
T ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccC------CCcchHHHHHHHHHHhHHHHH-HHHHHeeEee
Confidence 8888989999999988765544 4555555555555444211 122222222222222222222 2234555567
Q ss_pred cCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 450 SSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 450 ~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
.|++.-|++.|+..+++.+|+.+|..+...+.
T Consensus 434 ~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 434 VPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred eCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 79999999999999999999999998886655
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=1.4e-25 Score=221.77 Aligned_cols=412 Identities=13% Similarity=0.073 Sum_probs=258.4
Q ss_pred HHHHHHHhhhhhhccccccchhHHHH-Hh--hCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc-cchhHHHHHhhHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIA-KE--LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPL 164 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~ 164 (532)
+..+.+..+...+......+.+|.+. ++ +|+ +..+.+++.+.+.++..++++++|+++|| +|||++++++.++.
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~--s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGF--SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 45555666777777777777777664 44 788 89999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCccc---ccchhhHhHHHHHHHHHHHHHhcCCCCCCcc
Q 009536 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY---RGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 241 (532)
+++.++.+++++++.++++|++.|+|.|...+...++++|++|+++ |++++++++.+.++|.++||++++++.+..+
T Consensus 90 ~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 90 MLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998764 8889999999999999999999999988777
Q ss_pred hhHHHHHhhHHHHHHHHHHhcccc----cChhHHhhcCChhH--HHHHHH-----------H-HcCCcchHHHHH-----
Q 009536 242 WWRTMLYIASLPGFILALGMQFTV----ESPRWLCKGGMLND--AKAVIA-----------N-LWGESEINKAIE----- 298 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~--~~~~~~-----------~-~~~~~~~~~~~~----- 298 (532)
||+.|++.++..++..+...+.+ +.|+.. .+.+.++ ..+... . ....+.......
T Consensus 170 -~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (475)
T TIGR00924 170 -YHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVP-DPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVT 247 (475)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcccccccCCCCC-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 99999997765554443333322 111100 0000000 000000 0 000000000000
Q ss_pred --HHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCC------hhHHHHHHHH
Q 009536 299 --EFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGIT------DGALASLLVG 369 (532)
Q Consensus 299 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~ 369 (532)
..........++ .....-+++ .. .++...+.....+..+.......+.+.++ .+.+ ..++...+..
T Consensus 248 ~~~~~~~~~~~~~~---~~~~~~~~~-~~-~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~ 322 (475)
T TIGR00924 248 LAVIIFFFRLAFKP---RLDAVARNK-MY-AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNP 322 (475)
T ss_pred HHHHHHHHHHHHhc---cCCHHHHhH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhH
Confidence 000000000000 000011111 11 12222222222223333333333433332 2211 2456666666
Q ss_pred HHHHHHhhhhHhhhhhcCC-----chhh--hhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccc
Q 009536 370 VTNFAGALCASYLMDKEGR-----QKLL--IGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVT 442 (532)
Q Consensus 370 ~~~~~~~~~~g~l~d~~g~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (532)
+..++..++..++..+.+| +... .++.++.++++..+.+...........+.++++...++.........|..
T Consensus 323 ~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~ 402 (475)
T TIGR00924 323 FWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLG 402 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHH
Confidence 6666666554443333333 3333 56777777777666543111110011233333333444344444456888
Q ss_pred ccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeec
Q 009536 443 GLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 443 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
..++.+..|++.||+.+|+......+|..+++.+.....+..++...|...++++++..++.++..|
T Consensus 403 ~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 403 LSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999887777767777777777777776666554443
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.94 E-value=8.4e-26 Score=223.81 Aligned_cols=333 Identities=17% Similarity=0.148 Sum_probs=224.0
Q ss_pred hhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc----cchh-HHHHHhhHHHHHHHHHHHhhhc------H
Q 009536 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCR-RTFQIDTIPLILGAIISAQAHS------L 177 (532)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~ 177 (532)
..+.+.+++|+ ++.+.|++.++..+..++..++.|+++|| +||| +.++.+..+++++.+++...++ +
T Consensus 22 l~~~~~~~~g~--s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGL--SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCC--CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 44677788999 99999999999999999999999999998 6774 4677888888888888877654 4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHhhhhcC-CcccccchhhHhHHHHHHHHHHHHHhcCCCC-------CCcchhHHHHHh
Q 009536 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPAE-------DDPHWWRTMLYI 249 (532)
Q Consensus 178 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-------~~~~~wr~~f~~ 249 (532)
..+++.+++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+. +..+ ||+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g-~~~~~~i 178 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG-WFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-HHHHHHH
Confidence 56777889999998888888888888887 4688999999988888888766655543332 2335 9999999
Q ss_pred hHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHH
Q 009536 250 ASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (532)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (532)
.++++++..+.. +..+|+++.. +. .++++.+....++.+++++.++...
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~~~----~~--------------------------~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYSEI----PK--------------------------NIEKKLSLKQIFKALFKNDQLLILC 228 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCCCC----Cc--------------------------ccccCCCHHHHHHHHhCCHHHHHHH
Confidence 888877765544 4455543100 00 0000111123445666676655544
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHHHHc-C-CChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHH
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTFQDV-G-ITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLV 406 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 406 (532)
....+..+... ....+.+.+.+.. + ....+.......++.+++.++.+++.||+|+|+.+..+..+.+++.+.+
T Consensus 229 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~ 304 (437)
T TIGR00792 229 LAYLFYNLAFN----IKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIF 304 (437)
T ss_pred HHHHHHHHHHH----HHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 43333322221 1112222222211 2 1233455556678889999999999999999999988887777776665
Q ss_pred HHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccC-------ccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 407 VGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
.+.. ... ..........+++.+ ..+...++.+|..+ ++.+|.+.|+.+.+..+|..+++.+.|
T Consensus 305 ~~~~--------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 305 FFAG--------SNL-PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred HHcc--------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4411 111 122222222223222 23555666666654 556799999999999999999999999
Q ss_pred HHHHhhCcc
Q 009536 479 DLVETFGVA 487 (532)
Q Consensus 479 ~l~~~~g~~ 487 (532)
.+.+..||.
T Consensus 376 ~ll~~~G~~ 384 (437)
T TIGR00792 376 LILGIIGYV 384 (437)
T ss_pred HHHHHcCCC
Confidence 999988864
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.94 E-value=2.4e-26 Score=204.50 Aligned_cols=353 Identities=14% Similarity=0.076 Sum_probs=215.5
Q ss_pred ccccchhHHHHHhhCC----CC--ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcH
Q 009536 104 GVMNGPIVSIAKELGF----EG--NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL 177 (532)
Q Consensus 104 ~~~~~~~~~~~~~~~~----~~--~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~ 177 (532)
+...+....+.++|+. ++ +....|.+.+.|++.+.+.++.+|.++||+|||+++++|++..++..++.+++.|+
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F 121 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF 121 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444455555543 12 45567999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC---CcchhHHH--HHhhHH
Q 009536 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED---DPHWWRTM--LYIASL 252 (532)
Q Consensus 178 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~~~wr~~--f~~~~~ 252 (532)
..+++.|++.|+..| ......++++|.+++|+|++.++.++..+++|.++||.+|+++.. ..+.+... -++..+
T Consensus 122 ~afv~aR~l~Gi~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i 200 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFI 200 (451)
T ss_pred HHHHHHHHhhhhccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHH
Confidence 777777999999987 667788899999999999999999999999999999999999987 23311111 122222
Q ss_pred HHHH-HHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHH
Q 009536 253 PGFI-LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGG 331 (532)
Q Consensus 253 ~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (532)
+... .....+++||+-+. +++.++.. +..+...+. .+..+..+..-....+++.........
T Consensus 201 ~a~~~v~~~~~~lpETL~~---rk~~~~~~----------~~~~~~~~~----~~~~~~~~~~~v~~lrn~p~~~~i~~~ 263 (451)
T KOG2615|consen 201 LAAGDVTFFPWFLPETLPL---RKRNDEHS----------TLQEAADDR----LALLKFARIFKVAALRNPPLLDFISVL 263 (451)
T ss_pred HHHHHHHHHHHhCCccccc---hhhccccc----------chhhhhhhh----hhhcchhhhhhhhhhcCccccchHHHH
Confidence 2333 34455677877321 11111100 000000000 000000011111223333322211111
Q ss_pred ---HHHHHhhhcchhhHHHhHHHHH-HHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcC--CchhhhhhHHHHHHHH
Q 009536 332 ---ALFLLQQFAGINGVLYFSSLTF-QDVGIT--DGALASLLVGVTNFAGALCASYLMDKEG--RQKLLIGSYLGMAISM 403 (532)
Q Consensus 332 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~ 403 (532)
.+..+.+...+..+.++...+. ++.+.+ +.+-+....++.+.+......+..+|.+ .+..+..+..++.-.+
T Consensus 264 ~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~ 343 (451)
T KOG2615|consen 264 RIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAF 343 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHH
Confidence 2222222223333333333331 334444 4466666666766666666666666655 3334444444444344
Q ss_pred HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 404 LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
+++... .....+.....+-...+....+....++....|+++||+++|+..+...++.++||.+.|.+...
T Consensus 344 llls~~---------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 344 LLLSLA---------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHhcc---------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 443331 11112222222222222223355667778889999999999999999999999999999877654
No 92
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.2e-24 Score=191.75 Aligned_cols=366 Identities=18% Similarity=0.202 Sum_probs=275.4
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 165 (532)
+..+..+.+..+..--..+..+|.++++++|+|+ +.+..|+++++..+...+.+++..+++.|+|.++.+..++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gl--s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGL--SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHH
Confidence 3334444444455556668899999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009536 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (532)
Q Consensus 166 ~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~ 245 (532)
++.++=... +.+.++.+-.+.|.|.+...+..+.++.+.||++ -+..+++|....++|..+++.+...+.++.++||.
T Consensus 89 ~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 89 AGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 999998887 7888999999999999999999999999999977 89999999999999999999999888887755999
Q ss_pred HHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcch
Q 009536 246 MLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSR 325 (532)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (532)
...+-+.++++.++.++.-...++ ....+.+..+...++++|.-|
T Consensus 167 aL~~WAl~allAl~~WlPq~~r~~-----------------------------------~~~~~~~~~~~~~vw~~~~aW 211 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALREQ-----------------------------------AASIATKLVSVRKVWRSPLAW 211 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhccccc-----------------------------------ccccccccccccccccCchhH
Confidence 999999999888877754321110 011111122334567777655
Q ss_pred HHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcC-CchhhhhhHHHHHHH
Q 009536 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEG-RQKLLIGSYLGMAIS 402 (532)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~ 402 (532)
... +++..+...++....++|.++.+.|.+ +++.......+..++..+....+.+|.. +|+..+....++.++
T Consensus 212 ~vt----LfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 212 QVT----LFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred HHH----HHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 444 444444556777888999999999887 5588888899999999999999999754 555666666666667
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccc-cccCccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 009536 403 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIP-ELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDL 480 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 480 (532)
...+.+.+ ....+..++ ..+++ .+..+.....+. +...++..+...|+.+.++++-.+.||.+.|++
T Consensus 288 ~~G~~~~P---------~~~~~lw~~--llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 288 LVGLLLAP---------GQLPILWAL--LLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHhh---------hhHHHHHHH--HHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 66665532 112222222 22322 223444444443 344566788999999999999999999999999
Q ss_pred HHhhC-cchhhHhHHHHHHHHHHhhh
Q 009536 481 VETFG-VAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 481 ~~~~g-~~~~~~~~~~~~~~~~~~~~ 505 (532)
.|..| |...+..++.+.++..+..+
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 99988 55555555555554444443
No 93
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=1.1e-25 Score=216.39 Aligned_cols=330 Identities=15% Similarity=0.106 Sum_probs=220.5
Q ss_pred cccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-----chhHH-HHHhhHHHHHHHHHHHhh--
Q 009536 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRT-FQIDTIPLILGAIISAQA-- 174 (532)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~a-- 174 (532)
....++.+|.+.+|+|+ +..+.|+.... .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++.
T Consensus 4 ~~~~~~~~~~~~~~~g~--s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNV--SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred chhHHhHHHHHHHHcCC--CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 45567789999999999 89999999755 455555 99999999998 89887 467777888887777777
Q ss_pred -hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcch-------hHHH
Q 009536 175 -HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW-------WRTM 246 (532)
Q Consensus 175 -~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~-------wr~~ 246 (532)
.+++.+....++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+....+. ||..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 46667778888899999999999999999999999999999999999999999999999877765442 9999
Q ss_pred HHhhHHHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcch
Q 009536 247 LYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSR 325 (532)
Q Consensus 247 f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (532)
|++.++..++..+..++ .+|+++. +.. + +++ . + +.+..++++++++..+
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~~~---~~~--~--------------~~~----~---~----~~~~~~~~~~~~~~~~ 209 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQED---ASV--P--------------KPL----T---Q----AVLKPIREFFQRKNMI 209 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcc---ccc--c--------------hhH----H---H----HHHHHHHHHHHhcCch
Confidence 99988877776655554 3443210 000 0 000 0 0 0012344555555422
Q ss_pred HHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh--HHHHHHHH-HHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHH
Q 009536 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVG-VTNFAGALCASYLMDKEGRQKLLIGSYLGMAIS 402 (532)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 402 (532)
..........+ ..........+.+.++++.+.+.. +......+ +..+++.+++|++.||+|+|+.+..+.++.++.
T Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 210 QALLLLLLIVL-YKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 22222222222 222334445566666666666543 44444444 567889999999999999999888877777666
Q ss_pred HHHHHHHhcCCC-CccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHH
Q 009536 403 MLLVVGATSLPL-DEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHW 467 (532)
Q Consensus 403 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 467 (532)
..++.+...... ........+.+....+..+++.+ ..+...++..|.+|+++||+.+|+.+...+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 289 NAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 555444211000 00000111222222323233322 456678899999999999999999887654
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=1.2e-25 Score=210.48 Aligned_cols=358 Identities=10% Similarity=0.046 Sum_probs=223.5
Q ss_pred ccccccchhHHHHHhhCCCCChhH-HHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHH
Q 009536 102 HIGVMNGPIVSIAKELGFEGNPIL-EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEM 180 (532)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l 180 (532)
.+...+.+.|.+.+|+|+ +..+ .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+
T Consensus 41 ~R~n~s~a~p~L~~elgl--T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNF--TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred hhchHHHHHHHHHHHcCC--CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666778999999999 8888 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh---HHHHHHH
Q 009536 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA---SLPGFIL 257 (532)
Q Consensus 181 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~---~~~~~~~ 257 (532)
.+.|++.|++.|... +...++..|+|++||+++.++..++..+|.+++++++++ ....+ ||+.+.+. .....+.
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~g-Wr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLG-WISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-chhHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999998 44556 88766543 3333445
Q ss_pred HHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHH-HHHH-HHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHH
Q 009536 258 ALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINK-AIEE-FQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFL 335 (532)
Q Consensus 258 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (532)
++..+++|..++-+.-+++.+.......+.......+. ...+ .+......-......+++..+++. ++...+.+
T Consensus 196 ~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~----vl~WSlWw 271 (511)
T TIGR00806 196 VFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQ----LLLWSLWW 271 (511)
T ss_pred HHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcc----hhhhhHHH
Confidence 56667777555433222111000000000000000000 0000 000000000001112233344443 22223334
Q ss_pred HhhhcchhhHHHhHHHHHHHcCCCh---hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcC
Q 009536 336 LQQFAGINGVLYFSSLTFQDVGITD---GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSL 412 (532)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (532)
....+++..+..|.....+....++ .|.+-.+..+.+.+..+..|++-.++.+...+.++.....-+.+++....
T Consensus 272 a~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~-- 349 (511)
T TIGR00806 272 VFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQ-- 349 (511)
T ss_pred HHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhc--
Confidence 4445566677777777776664421 24444555666777788888886655433333333332222222222211
Q ss_pred CCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHH
Q 009536 413 PLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGL 475 (532)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~ 475 (532)
..+.+.......++...+.. ..++....+++....+..|..+|+.+++..+-..+-..
T Consensus 350 ----t~~Iw~~Y~~yvlf~~~y~f-litia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 350 ----SHDIWVLYVTYVLFRGIYQF-LVPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred ----ccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 11223333333333333332 23444455556666777799999988876665555443
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=3.9e-24 Score=208.11 Aligned_cols=371 Identities=12% Similarity=0.017 Sum_probs=245.2
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHH--HHHHHHHHHHHHHhh-hccccccchhHHHHHhhHHH-
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLV--VSIFIAGAFVGSISS-GSLADKLGCRRTFQIDTIPL- 164 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~~l~~~~~~~~~-G~l~dr~Grr~~l~~~~~~~- 164 (532)
...+...++..++..+...|.+|.+.+|.|. +..++|++ .++..+...+.++++ ++..||+||||.+++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~--~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGA--PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 4556666788899999999999999999998 99999997 466678887888888 55799999999976665432
Q ss_pred HHHHHHHH---hhhc-HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc
Q 009536 165 ILGAIISA---QAHS-LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (532)
Q Consensus 165 ~~~~~~~~---~a~~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 240 (532)
++.....+ ...+ ..+++..-++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 2222 3344555666777778888888888899999998898889898888999999998888888888
Q ss_pred chhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhc
Q 009536 241 HWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLE 320 (532)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (532)
+ ||..|++.+++.++..+..++++|+++. +.+. ++......++.+|
T Consensus 161 g-w~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~------------------------------~~~~~~~~~~~l~ 206 (390)
T TIGR02718 161 G-QRPAFLLVACVPLASLVCVLWLKDRAVA---SPEA------------------------------PLARRASLFRFFR 206 (390)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHcCCCCcC---cccc------------------------------chhhHHHHHHHHc
Confidence 8 9999999998887766655555543210 0000 0000123456677
Q ss_pred CCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh--HHHHHHHH-HHHHHHhhhhHhhhhhcCCchhhhhhHH
Q 009536 321 EPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVG-VTNFAGALCASYLMDKEGRQKLLIGSYL 397 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 397 (532)
+|..+.......+... .......+.+.++++.|.+.. +......+ ...+++.++.|++.||+|+|+.+..+..
T Consensus 207 ~~~~~~~~~~~~l~~~----~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~ 282 (390)
T TIGR02718 207 RPLAWSLLALALLSAM----TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVG 282 (390)
T ss_pred CcCHHHHHHHHHHHHH----HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 7765554443333322 222333355666677777643 45444444 4566778899999999999998887766
Q ss_pred HHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCc-cccchhHHHHHHHHHHHHHHHHH
Q 009536 398 GMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSN-RTRGKIMGFSFSVHWVCNFLVGL 475 (532)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~ 475 (532)
+.++............. .... ..........++..+. .+.......+..++ +.+++.+++.+...++|..++|.
T Consensus 283 ~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~ 358 (390)
T TIGR02718 283 LAGSLALLWFAQAAFWL---APGI-AVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASS 358 (390)
T ss_pred HHHHHHHHHHHHHHccc---CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 55333332222111000 0111 1111111111111122 23334444455554 78999999999999999999999
Q ss_pred HHHHHHHhhCcchhhHhHHHHHHHHHHh
Q 009536 476 FFLDLVETFGVAPVYAGFGGVSLLSALF 503 (532)
Q Consensus 476 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 503 (532)
+.|.++|..|+...|.+.+++.+++.++
T Consensus 359 ~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 359 IAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 9999999999988888777766665543
No 96
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1.6e-25 Score=227.13 Aligned_cols=302 Identities=17% Similarity=0.150 Sum_probs=211.5
Q ss_pred HHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHH
Q 009536 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (532)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 169 (532)
+..++..+......+..++.++.++++|++ +..+.|++.+.|.++++++.++.|+++||+|||+.+.++.++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~l--ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKL--STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCC--CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 444556677777788999999999999999 888999999999999999999999999999999999999999999999
Q ss_pred HHHhhh---------------------------------------------------cHHHHHHHHHHHhhhhhhhhhhh
Q 009536 170 ISAQAH---------------------------------------------------SLDEMLWGRFLVGLGIGVNTVLV 198 (532)
Q Consensus 170 ~~~~a~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~ 198 (532)
++++.+ .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 998763 25567889999999999999999
Q ss_pred hHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc---------------------chhHHHHHhhHHHHHHH
Q 009536 199 PIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------------------HWWRTMLYIASLPGFIL 257 (532)
Q Consensus 199 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~~ 257 (532)
.+++.|++|+++|+++++++..+..+|.++|+++++++.+.. +.||..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998876432 12778888888888777
Q ss_pred HHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHh
Q 009536 258 ALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQ 337 (532)
Q Consensus 258 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (532)
.+.++++|++.+....+.+.+..++. .. .....+ ...+ .....++....++.+++++.++...+...+
T Consensus 274 ~v~l~~~p~~lp~~~~~~~~~~~~~~--~~-~~~~~~-~~~~----~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~---- 341 (633)
T TIGR00805 274 SIPFFFFPKALPKEGKRVNVDVHETE--KL-EKSEDK-SRKK----NSDITKDFPKIIKRLLCNPIYMLVILAQVI---- 341 (633)
T ss_pred HHHHHhCccccCCcccccchhhhhhh--cc-cccccc-cchh----hhhhHHHHHHHHHHHHcCcHHHHHHHHHHH----
Confidence 66666666542110000000000000 00 000000 0000 000000112345667787765444443333
Q ss_pred hhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHH-HHHHHhhhhHhhhhhcCC--chhhhhhHHHHHHHHHH
Q 009536 338 QFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGV-TNFAGALCASYLMDKEGR--QKLLIGSYLGMAISMLL 405 (532)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~--~~~~~~~~~~~~~~~~~ 405 (532)
.......+..++|.++++ .+.+ .+++......+ +.+++.+++|+++||++. |+.+.++.++..++.++
T Consensus 342 ~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 342 DSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 334555666788888875 4554 34445444444 567899999999999884 45666666555555443
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=2.1e-23 Score=205.58 Aligned_cols=407 Identities=14% Similarity=0.123 Sum_probs=251.5
Q ss_pred CCchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhh
Q 009536 82 WLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDT 161 (532)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~ 161 (532)
..++|..+..........+. ...++...+.+.+++|+ +..+.+++.++. ....+++++.|++.||+|+|+++.++.
T Consensus 23 e~~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~lgl--s~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ 98 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSF-MYAFNLISGAMQARYNL--TQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSM 98 (591)
T ss_pred ccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCc--CHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34566555544444443332 23455677899999999 899999988874 445677888999999999999999999
Q ss_pred HHHHHHHHHHHhh------hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHH-HHHhcC
Q 009536 162 IPLILGAIISAQA------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT-SLFLGI 234 (532)
Q Consensus 162 ~~~~~~~~~~~~a------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~ 234 (532)
++++++.++++++ ++++.+++.|+++|+|.+...+.+...+.+|+| ++||++.|+...+.++|.++ +++..+
T Consensus 99 ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~ 177 (591)
T PTZ00207 99 TVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLA 177 (591)
T ss_pred HHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 689999999999999999999999999999997 56999999999999999975 555555
Q ss_pred CCCCCcchhHHHHHhhHHHHHHHHHHhcccc---cChhHHhhcCChhHHHHHHHHHcCC---------------------
Q 009536 235 PAEDDPHWWRTMLYIASLPGFILALGMQFTV---ESPRWLCKGGMLNDAKAVIANLWGE--------------------- 290 (532)
Q Consensus 235 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~~--------------------- 290 (532)
++. .+ |++.|++.+++.++..++.+.+. +.|++..++++.++.++..++..+.
T Consensus 178 l~~--~~-~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~ 254 (591)
T PTZ00207 178 FFS--DN-TSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILII 254 (591)
T ss_pred HHH--Hh-HHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHH
Confidence 443 24 88888888888777655544433 2233322232222222221110000
Q ss_pred -----------------cchHH------HH------H---------------------HHH--H-----HHHhc------
Q 009536 291 -----------------SEINK------AI------E---------------------EFQ--L-----VIKKD------ 307 (532)
Q Consensus 291 -----------------~~~~~------~~------~---------------------~~~--~-----~~~~~------ 307 (532)
..... .. . +.+ + ..++.
T Consensus 255 l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (591)
T PTZ00207 255 LIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETD 334 (591)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccccccccccccccccccccccccc
Confidence 00000 00 0 000 0 00000
Q ss_pred -c---CCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CC-Chh--H-HHHHHHHHHHHHHhhh
Q 009536 308 -G---SDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GI-TDG--A-LASLLVGVTNFAGALC 378 (532)
Q Consensus 308 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~-~~~~~~~~~~~~~~~~ 378 (532)
+ .....++.+.+++..+|..++ .+++...........+.++.+.. |. .+. . ....+.++++.+|++.
T Consensus 335 ~~~~~P~~~~t~~q~l~~~d~Wll~~----~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~ 410 (591)
T PTZ00207 335 VDYIAPQFQETFIEGLKTARLWCLLW----SIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLC 410 (591)
T ss_pred ccCCCCCCcchHHHHHhchhHHHHHH----HHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHH
Confidence 0 000012333333444444333 33333334444445555666666 44 222 2 2567789999999999
Q ss_pred hHhhhhhcCCc--------hhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccc
Q 009536 379 ASYLMDKEGRQ--------KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPEL 449 (532)
Q Consensus 379 ~g~l~d~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 449 (532)
.|.++....+| ...+....++.++.++++.. .+... +.+..+..+++.|. +++....+.|+
T Consensus 411 ~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~--------~p~~~--L~~~~~lvg~~~G~~~~~~~~i~sel 480 (591)
T PTZ00207 411 MSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT--------LPKAA--LPLPYFIAAFANGFMAATIALVTRTI 480 (591)
T ss_pred HHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH--------CCccH--hHHHHHHHHHHhhHhHHHHHHHHHHH
Confidence 99887322222 12222222244444444441 11112 22222333333343 46667888999
Q ss_pred cCccccchhHHHHHHHHHHHHHHH-HHHHHHHHHhh----------C---cchhhHhHHHHHHHHHHhhheeeccC
Q 009536 450 SSNRTRGKIMGFSFSVHWVCNFLV-GLFFLDLVETF----------G---VAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 450 ~~~~~~~~~~g~~~~~~~~g~~i~-~~~~g~l~~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
+. ++-|+-+-+.....-+|..+- -.++|.++|+- | +..+|++.+++++++.++...+.-++
T Consensus 481 Fg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 481 FA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred hc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 99 778888888887777777765 56788888763 2 67889999999988888766554443
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=2.3e-24 Score=214.30 Aligned_cols=407 Identities=14% Similarity=0.053 Sum_probs=236.7
Q ss_pred HHHHHHHhhhhhhccccccchhH-HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc-cchhHHHHHhhHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLIL 166 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~ 166 (532)
+..+++..+...+........++ .+.+++|+ +..+.+++.+.+........+++|+++|| +|||++++++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~--s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGM--SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 44555555556555555555444 55688999 88888888888877767777899999999 5999999999999999
Q ss_pred HHHHHHhhh-cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCccc--ccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 167 GAIISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY--RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 167 ~~~~~~~a~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
+.+++++++ +.+.++++|+++|+|.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++.+..+ |
T Consensus 101 g~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~ 179 (500)
T PRK09584 101 GYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-W 179 (500)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-H
Confidence 999999874 56677789999999999999999999999998653 4568899999999999999999999988888 9
Q ss_pred HHHHHhhHHHHHHHHHHhcc----cccChhHHhhcCChhHHHHHH-----------HHH-cCCcchHHHH------HHHH
Q 009536 244 RTMLYIASLPGFILALGMQF----TVESPRWLCKGGMLNDAKAVI-----------ANL-WGESEINKAI------EEFQ 301 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~------~~~~ 301 (532)
|+.|++.++..++..+...+ +++.++. ..+++.+...... ... ....+..... ....
T Consensus 180 ~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (500)
T PRK09584 180 SVAFALSVVGMLITVVNFAFCQRWVKQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVV 258 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 99999977654443332222 2222100 0000011000000 000 0000000000 0000
Q ss_pred HHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-c-----CCC-hhHHHHHHHHHHHHH
Q 009536 302 LVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-V-----GIT-DGALASLLVGVTNFA 374 (532)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~~~~~~ 374 (532)
.......+. .+..+++.. ..+..++.....+..+.....++..+..+ . |.. ...+...+..+..++
T Consensus 259 ~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil 331 (500)
T PRK09584 259 IFGKEAFAM-----KGAARRKMI--VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMI 331 (500)
T ss_pred HHHHHHhhc-----CHHHHHHHH--HHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHH
Confidence 000000000 001011110 11111111121222222222222221111 1 111 234555555655555
Q ss_pred Hhhhh----HhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccccccccc
Q 009536 375 GALCA----SYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELS 450 (532)
Q Consensus 375 ~~~~~----g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (532)
..++. +++.+|.+..+.+.++.++.+++++.+.............+.++.....++.........|....++.+..
T Consensus 332 ~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~a 411 (500)
T PRK09584 332 GSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLV 411 (500)
T ss_pred HHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 55555 45555555557788888888888888766433211111112233444344444444445688888899999
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHHH----------HhhCcchhhHhHHHHHHHHHHhhhe
Q 009536 451 SNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV----------ETFGVAPVYAGFGGVSLLSALFAYY 506 (532)
Q Consensus 451 ~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~----------~~~g~~~~~~~~~~~~~~~~~~~~~ 506 (532)
|++.||+++|+......+|..++..+.+... ...++...|...++++++..++.+.
T Consensus 412 P~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 412 PQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999877666666666655554221 0113566777677666555444433
No 99
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.91 E-value=1.3e-21 Score=187.14 Aligned_cols=374 Identities=16% Similarity=0.141 Sum_probs=253.0
Q ss_pred HHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccc-hhHHHHHhhHHHHHHHHHH
Q 009536 93 SMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-CRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~~~~~~~ 171 (532)
+..+|+..+..+.+.|.++.+-++.|. +..|+|++.++..+...++++++|.++||++ +|+++.+..++.++.....
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~--s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGF--SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 444566666777788889999999998 9999999999999999999999999999986 6788888888888877777
Q ss_pred HhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHh-cCCCCCCcc--hhHHHHH
Q 009536 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL-GIPAEDDPH--WWRTMLY 248 (532)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~~--~wr~~f~ 248 (532)
...++++.+++.-++..+......|...++..+...+ +++-.|-.-...++|.+++... ++.+....+ ...+.++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 8888999999888888888888888888888887763 4445555556666666666432 111111111 1334566
Q ss_pred hhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHH
Q 009536 249 IASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (532)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (532)
+.+...++.....+.+|+.|+.. +. .++.++....+..+++|+|+....+
T Consensus 164 i~~~~~~ll~~~~l~lp~~~~~~--~~----------------------------~~~~~~~~~~~~~~llk~~~~~~Fl 213 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTPPKR--SA----------------------------KESVKKLLGLDALKLLKNPRFLVFL 213 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCcccc--cc----------------------------CCCcccccchHHHHHhcCccHHHHH
Confidence 66666655555556677765200 00 0000111112334678888766544
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHHHHcC-CC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHH
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTFQDVG-IT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLL 405 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 405 (532)
+..++. .........|.+.++++.+ .. ..+....+..++.++.-...+++..|+|.++++.++.+..++=..+
T Consensus 214 l~~~l~----~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 214 LAAFLI----GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLL 289 (400)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 443333 2344556667778888887 33 3355556667888899999999999999999999999998888888
Q ss_pred HHHHhcCCCCccchhhHHHHHHHH--HHHHHhccc-ccccccccccccCccccchhHHHHHHH-HHHHHHHHHHHHHHHH
Q 009536 406 VVGATSLPLDEDFSHNLSILGTLF--YIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSV-HWVCNFLVGLFFLDLV 481 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~i~~~~~g~l~ 481 (532)
+..... +.+.......+ ..-+...+. ......++.+..|++.|+++.++++.. ..+|..+|..+.|+++
T Consensus 290 ~a~~~~-------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~ 362 (400)
T PF03825_consen 290 YAYFSD-------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLY 362 (400)
T ss_pred HHHhcC-------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 776310 11111111111 122222222 244567888999999999999998876 4699999999999999
Q ss_pred HhhCcch------hhHhHHHHHHHHHHhhheeeccC
Q 009536 482 ETFGVAP------VYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 482 ~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
|+.|.+. .+.+.+++.++..++.+++.|++
T Consensus 363 ~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 363 DAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 9988554 33445555555555554554443
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=2.3e-21 Score=187.42 Aligned_cols=400 Identities=14% Similarity=0.085 Sum_probs=254.5
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccc----ccchhHHHHHh-hHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRRTFQID-TIP 163 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~d----r~Grr~~l~~~-~~~ 163 (532)
++.++...+...+......+.++.+.+++|. +....+++..+..+...+.+++.|.++| |+|||+.++++ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~--~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGI--PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 4455555566666777777888888899999 8999999999999999999999999999 59999998875 666
Q ss_pred HHHHHHHHHhhhcHH-----------------HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccc--cchhhHhHHHHHH
Q 009536 164 LILGAIISAQAHSLD-----------------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYR--GSLGTLCQVGTCL 224 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~-----------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~ 224 (532)
.+++.++.++++++. .++++-.+..++.....+...+++.|.+|+++| +.+.++.+...++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI 163 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH
Confidence 667777777776643 223333344557777888889999999998865 5799999999999
Q ss_pred HHHHHHHhcCCCC--CCc------------chhHHHHHhhHHHHHHHHHH-hcccccChhHHhhcCChhHHHHHHHHHcC
Q 009536 225 GIITSLFLGIPAE--DDP------------HWWRTMLYIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWG 289 (532)
Q Consensus 225 g~~~g~~~~~~l~--~~~------------~~wr~~f~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 289 (532)
|.++|+.++++.. +.. .+.|+.|++.++..++..+. .+..+|.|... .++..++ +..
T Consensus 164 G~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~-~~~~~~~------~~~- 235 (477)
T TIGR01301 164 GNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG-SDDFINS------EAA- 235 (477)
T ss_pred HHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc-cccchhh------hcc-
Confidence 9999999987641 110 12789999988877766544 45567754210 0000000 000
Q ss_pred CcchHHHHHHHHHHHHhccCCCcchhhhhhcCC-cchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-c-CC--------
Q 009536 290 ESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP-HSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-V-GI-------- 358 (532)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-------- 358 (532)
+.++......++++++.- ...+.+...++..++.+.+...+..|.+.+..+ . +.
T Consensus 236 ---------------~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y 300 (477)
T TIGR01301 236 ---------------PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKY 300 (477)
T ss_pred ---------------cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHH
Confidence 000000011122222211 111222333333333444444455555554432 1 11
Q ss_pred Ch----hHHHHHHHHHHHHHHhhhhHhhhhhcCC-chhhhhhHHHHHHHHHHHHHHhcCCCC-----------ccchhhH
Q 009536 359 TD----GALASLLVGVTNFAGALCASYLMDKEGR-QKLLIGSYLGMAISMLLVVGATSLPLD-----------EDFSHNL 422 (532)
Q Consensus 359 ~~----~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 422 (532)
++ ..+.....++...+.+++..++.+|+|+ |+...++.++.++++....+....... .+.....
T Consensus 301 ~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 380 (477)
T TIGR01301 301 DDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIK 380 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhH
Confidence 11 1234445566666777888899999985 677788888888887777654321100 0000001
Q ss_pred HHHHHHHHHHHHhcc-cccccccccccccCc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC--cchhhHhHHHHH
Q 009536 423 SILGTLFYIFTFAIG-AGPVTGLVIPELSSN--RTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG--VAPVYAGFGGVS 497 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g--~~~~~~~~~~~~ 497 (532)
......+...|...+ ...+.++++++..++ +..|..+|+.|.+..+...+.....|.+.+..| ....+.+.++.+
T Consensus 381 ~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~ 460 (477)
T TIGR01301 381 ASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAA 460 (477)
T ss_pred HHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHH
Confidence 222222222333222 246678888888884 456999999999999999999999998777766 455677777788
Q ss_pred HHHHHhhheeeccCCC
Q 009536 498 LLSALFAYYFIVETKG 513 (532)
Q Consensus 498 ~~~~~~~~~~~~~~~~ 513 (532)
++++++.++.+|+.+.
T Consensus 461 ~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 461 FVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHhCCCCCC
Confidence 8888888888887653
No 101
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.4e-23 Score=178.78 Aligned_cols=367 Identities=16% Similarity=0.077 Sum_probs=232.7
Q ss_pred CCchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc-cchhHHHHHh
Q 009536 82 WLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQID 160 (532)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~ 160 (532)
...|...++.+|+..|..+++....+....++.+|.++ +.++..++.+.|.+...+.++++|++.|| +|-|..-++-
T Consensus 39 l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni--~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~ 116 (459)
T KOG4686|consen 39 LGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNI--EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL 116 (459)
T ss_pred hhhHHHHHHHHHHhcccceeecCCchhhhhhhhccccc--ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH
Confidence 34577788889999999999999888888888888888 78888999999999999999999999997 7888877777
Q ss_pred hHHHHHHHHHHHh---hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC
Q 009536 161 TIPLILGAIISAQ---AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 161 ~~~~~~~~~~~~~---a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 237 (532)
++...+|.++++. .+.+|+++++||+.|+|.-...++.+.++.-||..||.+.++|+.....-+|..+-..+.+++.
T Consensus 117 ~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly 196 (459)
T KOG4686|consen 117 CIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLY 196 (459)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHH
Confidence 7777788887764 6899999999999999998888899999999999999999999999999999887766666665
Q ss_pred CCcchhHHHH--HhhHHHHHHHHHHhcccccChhHHhhcCC-hhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcch
Q 009536 238 DDPHWWRTML--YIASLPGFILALGMQFTVESPRWLCKGGM-LNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ 314 (532)
Q Consensus 238 ~~~~~wr~~f--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (532)
+..+ -.| ..-..+++...+-...+..+--.....+- .+.+++.+.+- .....+..+-.
T Consensus 197 ~~~~---~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e----------------~g~~Ge~pkLt 257 (459)
T KOG4686|consen 197 DTMG---RMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLE----------------EGFLGEEPKLT 257 (459)
T ss_pred HHHH---HhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhh----------------cCcccCCcccc
Confidence 5332 000 00000011000000000000000000000 00111111000 00000110001
Q ss_pred hhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHH-cCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchh
Q 009536 315 WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQD-VGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKL 391 (532)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 391 (532)
-..-+ .|.+|... +.+..+......+....+.++++ .|.+. ++...........+.+++.|.++||+|++..
T Consensus 258 dv~~f-~ppfw~~~----iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~ 332 (459)
T KOG4686|consen 258 DVNTF-YPPFWVLV----IICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW 332 (459)
T ss_pred ccccc-CccHHHHH----HHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh
Confidence 01111 22333333 33333333344444445555554 46663 3444445556667778899999999999877
Q ss_pred hhhhHHHHH-HHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHH
Q 009536 392 LIGSYLGMA-ISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCN 470 (532)
Q Consensus 392 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 470 (532)
.+.+..+.. ++-..+.+ ..+.+...+.+.+..+..... ..+..++.+.|+++.|+++|+++.+.++|-
T Consensus 333 wv~~a~~~tl~~H~~l~F----------t~lsPy~~m~~lGLsysllAc-slWP~va~~vpE~qLGTaygf~qsIqNLgl 401 (459)
T KOG4686|consen 333 WVASACILTLLGHSGLFF----------TFLSPYTSMTFLGLSYSLLAC-SLWPCVASLVPEEQLGTAYGFIQSIQNLGL 401 (459)
T ss_pred hHHHHHHHHHHHhhhHHh----------hhccHHHHHHHHhhhHHHHHH-HHhhhhhhhCCHHHhcchHHHHHHHHhhhh
Confidence 665544433 33333333 112233333333333332211 234556677888999999999999999999
Q ss_pred HHHHHHHHHHHHhhC
Q 009536 471 FLVGLFFLDLVETFG 485 (532)
Q Consensus 471 ~i~~~~~g~l~~~~g 485 (532)
++.|+++|.+.|..|
T Consensus 402 a~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 402 AFIPIIAGFIADGDG 416 (459)
T ss_pred hHHhhhhheeecCCC
Confidence 999999999998877
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=9.2e-22 Score=194.03 Aligned_cols=387 Identities=13% Similarity=0.018 Sum_probs=241.4
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccc-----hhHHHHHhhHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-----CRRTFQIDTIP 163 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~ 163 (532)
+.++...++..++.........+.+.+++|+ +..+++...++..+...+-.+ +|+++||++ ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~--s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGL--DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 4445555677777744444555677778999 999999999999999988666 999999998 78888888777
Q ss_pred HH-HHHHHHHhhhcHHHHH-HHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHh---HHHHHHHHHHHHHhcCCCCC
Q 009536 164 LI-LGAIISAQAHSLDEML-WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC---QVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 164 ~~-~~~~~~~~a~~~~~l~-~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~---~~~~~~g~~~g~~~~~~l~~ 238 (532)
.+ +.....+..++...+. +++++.+++.+...++..+++.|..+ +++....+.. ....++|.++|+.++|.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 4433344445544444 48899999999999999999999998 5454433333 33445899999999999988
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhh
Q 009536 239 DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSEL 318 (532)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (532)
..+ ||..|++.+++.++..+..++++|++.....+.. ++.... ..... .......+ +........
T Consensus 184 ~~~-~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~-~~~~~~--------~~~~~-~~~~~~~~----~~~~~l~~~ 248 (468)
T TIGR00788 184 KTL-TRILFLITAALLLLQLFVSNLSKERRAFVRPRIG-TYLEMN--------MALLT-LGVLANVK----VQILGLRGA 248 (468)
T ss_pred hcC-cchHHHHHHHHHHHHHHHHHhccccccccccccc-ccchhh--------hhhhh-hhHHHHHH----HHHHHHHHH
Confidence 877 9999999888887776666777775310000000 000000 00000 00000000 001122334
Q ss_pred hcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHH
Q 009536 319 LEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLG 398 (532)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 398 (532)
+++|..+..+...++.+...........++.+. ..+.+....+......+++.+++..+.+++.+|++.|+++.++.++
T Consensus 249 l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~-~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l 327 (468)
T TIGR00788 249 IQLLEIAKPLIFIFLSYANLPGASGSVFCATTQ-CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLL 327 (468)
T ss_pred HhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcc-cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 555554443333333111111111111111121 1223444668888888899999999999999999999998888887
Q ss_pred HHHHHHHHHHHh-cCCCCcc-chhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHH
Q 009536 399 MAISMLLVVGAT-SLPLDED-FSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLF 476 (532)
Q Consensus 399 ~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~ 476 (532)
.+++........ .+..... ...........+...+.+....+ ...++.+..|++.+|+.+++.+.+.++|..+++.+
T Consensus 328 ~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~-~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 328 YTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMP-FLVLLARLCPSGCESSVFALLASILHLGSSVSGFL 406 (468)
T ss_pred HHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHcc-HHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHH
Confidence 777664432111 0000000 01112222223333334443444 46788899999999999999999999999999999
Q ss_pred HHHHHHhhC-----cchhhHhHHHH
Q 009536 477 FLDLVETFG-----VAPVYAGFGGV 496 (532)
Q Consensus 477 ~g~l~~~~g-----~~~~~~~~~~~ 496 (532)
.+.+.+..| ++..+.+..+.
T Consensus 407 gg~l~~~~g~~~~~~~~~~~~i~i~ 431 (468)
T TIGR00788 407 GVLLMETIGITCDNSNNLWLLILGH 431 (468)
T ss_pred HHHHHHHcCCCcccccchHHHHHHH
Confidence 999999988 66655544433
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=1.3e-20 Score=183.01 Aligned_cols=402 Identities=11% Similarity=0.052 Sum_probs=228.8
Q ss_pred HHHHHHHhhhhhhccccccchhH-HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-chhHHHHHhhHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLIL 166 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~ 166 (532)
+..++...+...+....+...+| .+.+++|+ ++.+.+.+.+.+.....++.+++|+++||+ |||++++++.++.++
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgl--s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKY--DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 44444444555555554555555 44667888 899999999999999999999999999999 999999999999999
Q ss_pred HHHHHHhhh-cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcc--cccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 167 GAIISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 167 ~~~~~~~a~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
+.++++... +...++++..+.++|.|...+...++++|.+|++ +|..++++.+.+.++|..++|.+.+++.+..+ |
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w 167 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-W 167 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-h
Confidence 988776543 2233444444555666777787888999999875 69999999999999999999999999988878 9
Q ss_pred HHHHHhhHHHHHHHHHHhcccccChhHH-hhcCChhHHHHHHHHH-------------cCCcchHHHHHHHH-H------
Q 009536 244 RTMLYIASLPGFILALGMQFTVESPRWL-CKGGMLNDAKAVIANL-------------WGESEINKAIEEFQ-L------ 302 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~-~------ 302 (532)
|+.|.+.++..++.++..++..+..... ..+.++.+.++..... .......+...... .
T Consensus 168 ~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (493)
T PRK15462 168 AMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIG 247 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987664444333332211110000 0000000000000000 00000000000000 0
Q ss_pred ---H-HHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc------CCC-hhHHHHHHHHHH
Q 009536 303 ---V-IKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV------GIT-DGALASLLVGVT 371 (532)
Q Consensus 303 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~ 371 (532)
- .-...+..+. ++++...++..++.....+..+.....-+..+.++. |.+ .+.+...+..+.
T Consensus 248 ~~~~~~~~~~~~~~~-------er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ 320 (493)
T PRK15462 248 LGVLAKIYRKAENQK-------QRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFA 320 (493)
T ss_pred HHHHHHHHHhcCCHH-------HHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHH
Confidence 0 0000000000 011111111222222222222222222222222221 222 345666777777
Q ss_pred HHHHhhhhHhhhhhcCC--ch-----hhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccc
Q 009536 372 NFAGALCASYLMDKEGR--QK-----LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGL 444 (532)
Q Consensus 372 ~~~~~~~~g~l~d~~g~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (532)
-++..++..++-.|..+ |. -+.++.++.+++++.+.............+.++++...++....-....|+..+
T Consensus 321 ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls 400 (493)
T PRK15462 321 VMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMS 400 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHH
Confidence 77777776666565532 21 256778888888877765433221111123344444444445555667899999
Q ss_pred ccccccCccccchhHHHHHHHH-HHHHHHHHHHHHHHHH------------hhCcchhhHhHHHHHHHH
Q 009536 445 VIPELSSNRTRGKIMGFSFSVH-WVCNFLVGLFFLDLVE------------TFGVAPVYAGFGGVSLLS 500 (532)
Q Consensus 445 ~~~~~~~~~~~~~~~g~~~~~~-~~g~~i~~~~~g~l~~------------~~g~~~~~~~~~~~~~~~ 500 (532)
.++++.|++.+|..+|+..... .+|..++..+.+.... ...+...|...+...++.
T Consensus 401 ~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 401 QITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999985533 4555555555543321 012344566666555544
No 104
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.89 E-value=1.4e-20 Score=172.38 Aligned_cols=399 Identities=15% Similarity=0.095 Sum_probs=274.8
Q ss_pred CCCCchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHH
Q 009536 80 LGWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI 159 (532)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~ 159 (532)
+-+.+||.+++..++..+.+++....+++........|+ +....-|...+|++.+....+++-|+.|++|-|..+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg---s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG---SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc---chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 456788999999999999999999888888888888888 56667899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhh------hcHH--HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHH
Q 009536 160 DTIPLILGAIISAQA------HSLD--EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (532)
Q Consensus 160 ~~~~~~~~~~~~~~a------~~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 231 (532)
+..+.++|..+-..+ +.++ ....+..+.+.+.-........+..-||+++||..+..+-.++..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999999987765 2344 56678888888888777777888899999999999999999999999999998
Q ss_pred hcCCCCCCc----c-hhHH--HHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHH
Q 009536 232 LGIPAEDDP----H-WWRT--MLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLV 303 (532)
Q Consensus 232 ~~~~l~~~~----~-~wr~--~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (532)
+...+..+. + .|.. .|+....++++.+++. +..++.|+.- ...+ .
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP-----ps~s----------------------~ 247 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP-----PSAS----------------------Q 247 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----Cchh----------------------H
Confidence 888876554 1 2554 3443333333333222 2233333200 0000 0
Q ss_pred HHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHh
Q 009536 304 IKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASY 381 (532)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~ 381 (532)
.+..+.+...+.+..++++.+....+.. ......++.+...+...+...+.. .+|.......++++++.++.|.
T Consensus 248 ~~~~~~~f~~si~~~~~n~~F~il~~~y----gi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gi 323 (480)
T KOG2563|consen 248 AALQDASFPKSIKSCFKNRQFIILAICY----GIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGI 323 (480)
T ss_pred hhhhcCcHHHHHHHHHcCccHHHHHHHH----hhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHh
Confidence 0011222445667777777654433333 333334445555554333333444 6788888999999999999999
Q ss_pred hhhhcCCchh-hhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHH
Q 009536 382 LMDKEGRQKL-LIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMG 460 (532)
Q Consensus 382 l~d~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 460 (532)
+.||.+..+. .++......++...+..... . ....+.+...+...+.++.+..|+..-+..|..-|..-++..|
T Consensus 324 i~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~-~----~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsG 398 (480)
T KOG2563|consen 324 IADKTKKFKLTTLVLYLFALVGTLMLLTCTL-F----LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSG 398 (480)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-c----CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccce
Confidence 9999876554 33333333333222211111 1 1233334444555556667777888888888887777899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC----cchhhHhHHHHHHHHHHhhheeeccCCCCCHH
Q 009536 461 FSFSVHWVCNFLVGLFFLDLVETFG----VAPVYAGFGGVSLLSALFAYYFIVETKGRSLE 517 (532)
Q Consensus 461 ~~~~~~~~g~~i~~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (532)
+.+..+++-+.+-..+.+...+..+ +...-+.....+++..++..++.++.++++.+
T Consensus 399 ll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 399 LLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred eEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 9999999999999999998888777 44444555555555666555565555544433
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=3.5e-21 Score=190.41 Aligned_cols=332 Identities=15% Similarity=0.105 Sum_probs=209.8
Q ss_pred hhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc----cchh-HHHHHhhHHHHHHHHHHHhhhc------H
Q 009536 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCR-RTFQIDTIPLILGAIISAQAHS------L 177 (532)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~ 177 (532)
....+.+++|+ +..++|.+.++..+..++..|+.|.++|| +||| +.++.+.+..++..++....++ +
T Consensus 32 l~~~~t~~~gl--s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 32 LAYFYTDVFGL--SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 45678888999 99999999999999999999999999999 7774 5555677777777665554432 4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHhhhhcC-CcccccchhhHhHHHHHHHHHHHHHhcCC----CCC---CcchhHHHHHh
Q 009536 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIP----AED---DPHWWRTMLYI 249 (532)
Q Consensus 178 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~----l~~---~~~~wr~~f~~ 249 (532)
..+++..++.+.+.........++..|+. +++||++..++...+..+|..+++.+... +.. ..+ |+..+.+
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g-~~~~~~i 188 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKG-YFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh-HHHHHHH
Confidence 55666677777777777777788999988 46789988888877777777766554322 211 234 8988888
Q ss_pred hHHHHHHHHHHhc-ccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHH
Q 009536 250 ASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAF 328 (532)
Q Consensus 250 ~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (532)
.++++++..+..+ ..+|.++. + ++++.+.....+.+++++.++..+
T Consensus 189 ~~ii~~v~~~~~~~~~~e~~~~---~------------------------------~~~~~~~~~~~~~~~~n~~~~~l~ 235 (444)
T PRK09669 189 MGLLGVVLFFCCFFMTKERYTP---E------------------------------VDNSSSVWKDLKLLLGNSQWRIMF 235 (444)
T ss_pred HHHHHHHHHHHHhCCeEEecCC---C------------------------------CcCCCCHHHHHHHHhCCchHHHHH
Confidence 8877766554443 34443110 0 001111233456677777766654
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHHHHcCCCh-hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHH
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTFQDVGITD-GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVV 407 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 407 (532)
....+.............+|..+.+ +..+ .........+..+++.++.+++.||+|+|+.+..+..+.++....+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~y~~~~~~---~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 312 (444)
T PRK09669 236 IFNVVLLTAVVTRGGATLYYVNYVL---LRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIF 312 (444)
T ss_pred HHHHHHHHHHHHHhhhhheeeeeec---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 4433332222111122222222211 1122 23334444567778888999999999999998877665554333332
Q ss_pred HHhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccC-------ccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009536 408 GATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVGLFFLD 479 (532)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 479 (532)
+.. ......+ .......+.+. ...+...++++|..+ .+..|..+|+.+.+..+|.++++.+.|.
T Consensus 313 ~~~-------~~~~~~~-~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 313 FIP-------PSNVWLI-FALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HhC-------cchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 1112222 22222222222 334667777877764 3345678899999999999999999999
Q ss_pred HHHhhCcc
Q 009536 480 LVETFGVA 487 (532)
Q Consensus 480 l~~~~g~~ 487 (532)
+.+..||.
T Consensus 385 ll~~~Gy~ 392 (444)
T PRK09669 385 ILAWVDYV 392 (444)
T ss_pred HHHHcCCC
Confidence 99988873
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.87 E-value=7.5e-21 Score=189.07 Aligned_cols=354 Identities=10% Similarity=0.005 Sum_probs=213.0
Q ss_pred HHhhhhhhccccccchh-HHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccc----ccch-hHHHHHhhHHHHHH
Q 009536 94 MSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGC-RRTFQIDTIPLILG 167 (532)
Q Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~~~~~ 167 (532)
++.+...+......+.+ ..+.+.+|+ +...+|.+..+..+.-++..|++|.++| |+|| |+.++.+.+..+++
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gl--s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGL--SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVV 90 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHH
Confidence 34444444444444444 456677799 9999999999999999999999999999 6698 66666787777777
Q ss_pred HHHHHhhhc------HHHHHHHHHHHhhhhhhhhhhhhHhhhhcC-CcccccchhhHhHHHHHHHHHHHHHhcCCC----
Q 009536 168 AIISAQAHS------LDEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPA---- 236 (532)
Q Consensus 168 ~~~~~~a~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l---- 236 (532)
..++-..++ +..+++..++.+++.....+...+++.|.. +++||.+..++-..+.++|..+.+.+...+
T Consensus 91 ~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 91 LFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred HHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665544321 345566667778888888888899999998 588999998886666666654444332211
Q ss_pred ---CCCcchhHHHHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCc
Q 009536 237 ---EDDPHWWRTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLD 312 (532)
Q Consensus 237 ---~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (532)
.+..+ |+....+.+++.++..+.. +..+|.++....+ ..++++.+.+
T Consensus 171 g~~~~~~g-~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~----------------------------~~~~~~~~~~ 221 (473)
T PRK10429 171 GGGDRGFG-FQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV----------------------------SAEGSHLTLK 221 (473)
T ss_pred CCCchhhh-HHHHHHHHHHHHHHHHHHHHcCceecCCccccc----------------------------cccccCCCHH
Confidence 11223 7887777777766544433 3355542100000 0000111122
Q ss_pred chhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCch
Q 009536 313 SQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQK 390 (532)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 390 (532)
..++.+++++.++..+....+... .......+.+++.+..... ..+.......++.+++.++.+++.||+|+|+
T Consensus 222 ~~~~~~~~n~~~~~ll~~~~~~~~----~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~ 297 (473)
T PRK10429 222 DIVALIYKNDQLSCLLGMALAYNI----ASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI 297 (473)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHH----HHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 334445566544443333222222 2222222222232222111 2234444556788889999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccC-------ccccchhHHHHH
Q 009536 391 LLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSS-------NRTRGKIMGFSF 463 (532)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~ 463 (532)
.+..+..+.+++.+.+....... ..+.+..++...+...+.+ ...+...++++|..+ .+..|..+|..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~l~g~~~~-~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~ 373 (473)
T PRK10429 298 LWAGASIFPVLSCGVLLLMGLAA---PHNALLIVIAGILLNIGTA-LFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQT 373 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---chhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHH
Confidence 98877776665555543321111 1111222222222222222 223455667777754 344566899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCc
Q 009536 464 SVHWVCNFLVGLFFLDLVETFGV 486 (532)
Q Consensus 464 ~~~~~g~~i~~~~~g~l~~~~g~ 486 (532)
.+..++..+++.+.|.+.+..||
T Consensus 374 ~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 374 MVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999988876
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.87 E-value=7.7e-20 Score=179.90 Aligned_cols=337 Identities=17% Similarity=0.138 Sum_probs=239.6
Q ss_pred chhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccc----ccchhHHH-HHhhHHHHHHHHHHHhh-h------
Q 009536 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRRTF-QIDTIPLILGAIISAQA-H------ 175 (532)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~a-~------ 175 (532)
...+.+.+.+|+ ++...|.+..+..+..++..|+.|.++| |+||||.+ ++|.++.+++.+++... +
T Consensus 23 ~~~~f~~~~~gl--~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGL--SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 345677788899 9999999999999999999999999999 89976555 46777778777777655 4
Q ss_pred -cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCC-cccccchhhHhHHHHHHHHHHHHHhcCCCCCCcc------hhHHHH
Q 009536 176 -SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH------WWRTML 247 (532)
Q Consensus 176 -~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~------~wr~~f 247 (532)
.+..+.+.-++..++.........++..|..+ ++||.+..+.-..+..+|.++...+.+.+.+..+ +|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 23345777777799999999999999999998 5789999999998888888766666665543222 499999
Q ss_pred HhhHHHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchH
Q 009536 248 YIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRV 326 (532)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (532)
++.+++.++..+...+ .+|+++ +...++++.+.+..++.+++++.++.
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke~~~-------------------------------~~~~~~~~~~~~~~~~~~~~nr~~~~ 229 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKERSV-------------------------------EVTEQEKKISLRDSLRSLFRNRPFRI 229 (428)
T ss_pred HHHHHHHHHHhhhhhheeeeccc-------------------------------cccccccccccccchhhhcccchHHH
Confidence 9988888876655544 455111 00111223334556778888887776
Q ss_pred HHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHH
Q 009536 327 AFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLV 406 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 406 (532)
.+....+..+..........+|....+.+. ...+.......++.+++.++.++++||+|+|+.+..+..+.+++.+++
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~--~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGNE--GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL 307 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH
Confidence 666555554444433444444444433222 234556667788889999999999999999999999999999888887
Q ss_pred HHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccccccC-------ccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 407 VGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
.+... .+... ........+.+ ........++.+|..+ .+..|..+|+.+....++..+++.+.+
T Consensus 308 ~~~~~-------~~~~~-~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 308 FFLGP-------GSPWL-VLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HHHHh-------hhHHH-HHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 77431 12222 22233333333 2334667788888775 345689999999999999999999999
Q ss_pred HHHHhhCcc
Q 009536 479 DLVETFGVA 487 (532)
Q Consensus 479 ~l~~~~g~~ 487 (532)
.+.+..|+.
T Consensus 380 ~~l~~~Gy~ 388 (428)
T PF13347_consen 380 LLLALVGYD 388 (428)
T ss_pred HHHHHhCcC
Confidence 999887754
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.86 E-value=3.5e-21 Score=180.10 Aligned_cols=380 Identities=14% Similarity=0.059 Sum_probs=233.0
Q ss_pred HHHHHHHHhhhhhhccccccchhHHHHHh-hCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH--
Q 009536 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL-- 164 (532)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~-- 164 (532)
..+......+...+..+...|..+...++ .|+ +..++|.+.++..+...+.+++.|.++||+|.||-++....+.
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GL--s~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGL--SGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCC--CHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHH
Confidence 34555566666777788888888876654 899 9999999999999999999999999999999766554433222
Q ss_pred HHHHH-HHHhh----hcHH-HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 165 ILGAI-ISAQA----HSLD-EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 165 ~~~~~-~~~~a----~~~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
..+.+ ...+. .|++ ..+++-+..|+......++.-+++.++. ++.+.=.|-.-++.++|.+++..++|.+.+
T Consensus 86 l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~ 163 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN 163 (412)
T ss_dssp TCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee
Confidence 12222 22222 2322 2333334445544555555555554443 223555666778889999999999998876
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhh
Q 009536 239 DPHWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSE 317 (532)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (532)
.. -+..||+....+++..++.++ .|+.++.....+.. ..++++.......+
T Consensus 164 i~--p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~ 215 (412)
T PF01306_consen 164 IN--PNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADAL--------------------------GAKKDKVSLKDVLS 215 (412)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTS--------------------------SS------HHHHHH
T ss_pred eC--ccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccc--------------------------ccCCCCCcHHHHHH
Confidence 43 467888776666655444433 33332110000000 00000001123456
Q ss_pred hhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC------hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchh
Q 009536 318 LLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT------DGALASLLVGVTNFAGALCASYLMDKEGRQKL 391 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 391 (532)
++|++++|...+....... .+.......+.++...-.+ ..+.......+..++.-.+..++.+|+|.|+.
T Consensus 216 l~k~~~fw~~~l~v~g~~~----~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~ 291 (412)
T PF01306_consen 216 LFKMRNFWFFVLFVIGVAA----IYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNL 291 (412)
T ss_dssp HTTSHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HhcchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhH
Confidence 6777776665544333322 2222322234444433222 22566666678888888999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHH-HHHHHHH
Q 009536 392 LIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFS-FSVHWVC 469 (532)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g 469 (532)
++++..++.+=..+.++.. +.+. +...=..-+..... .....-++++.+|++..++...+. +...+++
T Consensus 292 Lllag~i~~iRi~~~~~~~--------~~~~--i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~ 361 (412)
T PF01306_consen 292 LLLAGVIMAIRIIGSGFAT--------NPWV--ISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIG 361 (412)
T ss_dssp HHHHHHHHHHHHHHHHT----------SHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhhhc--------chHH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHH
Confidence 9999999988888877621 2222 22222222222222 223457888999999989999885 6778899
Q ss_pred HHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCC
Q 009536 470 NFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKG 513 (532)
Q Consensus 470 ~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (532)
.++.+.+.|.++|+.|++..|++.+.+.+...++..+.+++.++
T Consensus 362 ~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 362 IIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 99999999999999999999999998888887777776665544
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=5.9e-19 Score=174.86 Aligned_cols=346 Identities=13% Similarity=0.099 Sum_probs=200.3
Q ss_pred HHhhhhhhccccccch-hHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc----chhHHH-HHhhHHHHHH
Q 009536 94 MSNFLFGYHIGVMNGP-IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL----GCRRTF-QIDTIPLILG 167 (532)
Q Consensus 94 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~----Grr~~l-~~~~~~~~~~ 167 (532)
++.+..........+. .+.+.+.+|+ +..++|.+.+...+..++..++.|+++||. |||+.+ +.+.+...+.
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl--~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGV--GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 3444444444443333 3467777899 999999999999999999999999999996 777654 5555545444
Q ss_pred HHHH-Hh----hhc--HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCC-cccccchhhHhHHH-----HHHHHHHHHHhcC
Q 009536 168 AIIS-AQ----AHS--LDEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVG-----TCLGIITSLFLGI 234 (532)
Q Consensus 168 ~~~~-~~----a~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~g~~~g~~~~~ 234 (532)
.++. .. .++ ...+++.-++.+++.+...+...++..+... +++|.+..++-..+ ..++..++|.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 93 SVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 21 111 2334445667788888888877777777665 46788776655443 3355666666655
Q ss_pred CCCCCcc-hhHHHHHhhHHHHHHHHH-HhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCc
Q 009536 235 PAEDDPH-WWRTMLYIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLD 312 (532)
Q Consensus 235 ~l~~~~~-~wr~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (532)
....... .|.....+.++++++..+ .....+|+++. +.++....
T Consensus 173 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~----------------------------------~~~~~~~~ 218 (448)
T PRK09848 173 SSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR----------------------------------IVAQPSLK 218 (448)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC----------------------------------CccCCCHH
Confidence 4322111 122222222333333222 22334443210 00011122
Q ss_pred chhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc-CCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCc
Q 009536 313 SQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV-GITD--GALASLLVGVTNFAGALCASYLMDKEGRQ 389 (532)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 389 (532)
..++.+++++.+....+..++..... .......+.++++. +.+. .++......++.+++.++.+++.||+++|
T Consensus 219 ~~~~~l~~n~~f~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~ 294 (448)
T PRK09848 219 ISLQTLKRNRPLFMLCIGALCVLIST----FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK 294 (448)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHH----HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 34566778877655544433333222 22222334343332 3222 12223333566778889999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCcc-------ccchhHHHH
Q 009536 390 KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNR-------TRGKIMGFS 462 (532)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~ 462 (532)
+.+.++..+.+++.+.+.+... .+.+.......+...+.+. ..+...++.+|..|.+ ..|..+|+.
T Consensus 295 ~~~~~g~~~~~i~~~~~~~~~~------~~~~~~~~~~~l~g~G~~~-~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~ 367 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFWVSV------WSLPVALVALAIASIGQGV-TMTVMWALEADTVEYGEYLTGVRIEGLTYSLF 367 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCc------hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhHHhhCccchhHHHHHH
Confidence 9999988887777666654110 1112212222222222222 2344556666766543 469999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCc
Q 009536 463 FSVHWVCNFLVGLFFLDLVETFGV 486 (532)
Q Consensus 463 ~~~~~~g~~i~~~~~g~l~~~~g~ 486 (532)
+....+|..+++.+.+.+.+..||
T Consensus 368 ~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 368 SFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999888776
No 110
>PRK11462 putative transporter; Provisional
Probab=99.84 E-value=8.4e-19 Score=173.04 Aligned_cols=332 Identities=13% Similarity=0.051 Sum_probs=203.8
Q ss_pred hhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc----cchhHHH-HHhhHHHHHHHHHHHhhhc------H
Q 009536 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRRTF-QIDTIPLILGAIISAQAHS------L 177 (532)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr----~Grr~~l-~~~~~~~~~~~~~~~~a~~------~ 177 (532)
....+.+.+|+ ++..+|.+..+.-+--++.-|+.|.++|| +||||.. +++.+..+++.+++-..++ +
T Consensus 32 l~~fyt~~~Gl--~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 32 MMFFYTDIFGI--PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHHhhCC--CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 34567788899 99999999999999999999999999996 6876554 4566777777666554442 3
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHhhhhcCC-cccccchhhHhHHHHHHHHHHHHHhcCCCCCCc------chhHHHHHhh
Q 009536 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP------HWWRTMLYIA 250 (532)
Q Consensus 178 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------~~wr~~f~~~ 250 (532)
..+++.-++..++.........++..|..+ ++||++..++...+..+|..+++.+...+.... .+|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 445666777788888888888899999987 788999999999999988777766543322211 1288877777
Q ss_pred HHHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHH
Q 009536 251 SLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI 329 (532)
Q Consensus 251 ~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (532)
+++.++..+..++ .+|.++. ++++.+.+...+..++++.++....
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~~----------------------------------~~~~~~~~~~l~~~~~Nk~~~~l~~ 235 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVEA----------------------------------PPTTTSMREDLRDIWQNDQWRIVGL 235 (460)
T ss_pred HHHHHHHHHHHHhcceeccCC----------------------------------CccCCCHHHHHHHHhCChHHHHHHH
Confidence 7766655444333 3342210 0001111233455666666554433
Q ss_pred HHHHHHHhhhcchhhHHHhHHHHHHHcCCC-hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHH
Q 009536 330 GGALFLLQQFAGINGVLYFSSLTFQDVGIT-DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVG 408 (532)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 408 (532)
...+.............+|..+++ +.. ..+.......++.+++.++++++.||+++|+....+..+.++..+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~---g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~ 312 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWIL---GTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFF 312 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhc---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 333332222222233333333322 222 2234455667888889999999999999998876554444333333322
Q ss_pred HhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccC-------ccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 409 ATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
.+ ...........++... ......+....+.+|..+ .+..|..++..+....+|.++++.+.|.+.
T Consensus 313 ~~------~~~~~~~~~~~~l~g~-~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 313 VP------MQASITMFVFIFVIGV-LHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred hc------hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 0111111222122211 112223444556666554 333355567777899999999999999999
Q ss_pred HhhCc
Q 009536 482 ETFGV 486 (532)
Q Consensus 482 ~~~g~ 486 (532)
+..||
T Consensus 386 ~~~Gy 390 (460)
T PRK11462 386 AYGGY 390 (460)
T ss_pred HHcCC
Confidence 87776
No 111
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.83 E-value=9.5e-18 Score=163.66 Aligned_cols=357 Identities=15% Similarity=0.094 Sum_probs=226.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHh-hHHHHHHHHHHHhh-h-cHHHHHHHHHHHhhhhhhhhhhhh
Q 009536 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQID-TIPLILGAIISAQA-H-SLDEMLWGRFLVGLGIGVNTVLVP 199 (532)
Q Consensus 123 ~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~-~~~~~~~~~~~~~a-~-~~~~l~~~r~l~G~~~g~~~~~~~ 199 (532)
.+..++..++..+..++..|+.|.++|+-|+||.++.. .++..+.+.++.+. + +++...+.-++.-++.+.......
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34557788899999999999999999999876666554 44455566666664 3 455555566666677888888999
Q ss_pred HhhhhcCCcccc--------------------------cchhhHhHHHHHHHHHHHHHhcCCCCCCcc-------hhHHH
Q 009536 200 IYISEVAPTKYR--------------------------GSLGTLCQVGTCLGIITSLFLGIPAEDDPH-------WWRTM 246 (532)
Q Consensus 200 ~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-------~wr~~ 246 (532)
+++.|..+++++ ++..+.-.....+|.++.-++.-.+....+ .-|..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 999999999888 898888888888887776665543321111 15888
Q ss_pred HHhhHHHHHHHH-HHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcch
Q 009536 247 LYIASLPGFILA-LGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSR 325 (532)
Q Consensus 247 f~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (532)
+.+.++.-++.. ...+++||.|+....+.......... ++....++++.+.|...
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~------------------------~~l~~t~k~~~~~~~~~ 284 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF------------------------KRLWRTFKEIRKLRQLF 284 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH------------------------HHHHHHHHHHHhChHHH
Confidence 887777766544 44455666653100000000000000 00012233333333322
Q ss_pred HHHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCChh--HHHHHHHHHHHHHHhhhhHhhhhhcCCc--hhhhhhHHHHH
Q 009536 326 VAFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGITDG--ALASLLVGVTNFAGALCASYLMDKEGRQ--KLLIGSYLGMA 400 (532)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~ 400 (532)
..++..++..-+.+.+..+...+.. ..+.+.. ....+...+..++|.++.|++.||+|.| +++........
T Consensus 285 ----~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 285 ----LFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 2233333333455555555555555 4566644 5556667899999999999999999999 66665555442
Q ss_pred HH-HHHHH-HHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 401 IS-MLLVV-GATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 401 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
+. ...+. +... .....+.+.+....++.+.+..+..+..-++.+++.|+++.+.-+|++.......+.+||.+.|
T Consensus 361 ~i~~~g~~G~~~~---~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 361 IIPLYGLFGFWPS---FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHhhhc---ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22211 1111 0001222223333333333334456788899999999999999999999999999999999999
Q ss_pred HHHHhhC-cchhhHhHHHHHHHHHHhhheeeccC
Q 009536 479 DLVETFG-VAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 479 ~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
.+.+..| .+..+....++.+++.++. ...+..
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~ 470 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILL-FFVDVE 470 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHH-hhccch
Confidence 9999988 6777777777777776665 344433
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.81 E-value=7e-19 Score=163.88 Aligned_cols=276 Identities=16% Similarity=0.050 Sum_probs=184.4
Q ss_pred HhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc-----------
Q 009536 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP----------- 240 (532)
Q Consensus 172 ~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------- 240 (532)
+...+|+.++++-++.|.|.+...+..+.++++..+++++++.+++.+..+++|.+++|++++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999999999999999999999999776321
Q ss_pred ----chhHHHHHhhHHHHHHHHHHhccc--ccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcch
Q 009536 241 ----HWWRTMLYIASLPGFILALGMQFT--VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ 314 (532)
Q Consensus 241 ----~~wr~~f~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (532)
.+|+++|++.+.+.++..+.+.+. ||.++ +.++ ...+++ ...
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~------------------------~~~~~~--~~~ 132 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA------------------------RVSSGD--TTQ 132 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc------------------------cccccc--ccc
Confidence 249999997766655554444333 33210 0000 000000 001
Q ss_pred hhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc---CCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCc
Q 009536 315 WSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV---GIT--DGALASLLVGVTNFAGALCASYLMDKEGRQ 389 (532)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 389 (532)
.+..++++..+. ..+..+.+.........+.+.|+.+. +.+ +.+.....+..+..+|+++.+++.||+++|
T Consensus 133 ~~~~~~~~~~~l----~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~ 208 (310)
T TIGR01272 133 KTSAFQFTHLVL----GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG 208 (310)
T ss_pred hhhHHhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 112333333222 23333334444555666677777543 443 557778888899999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHH
Q 009536 390 KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVC 469 (532)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 469 (532)
+.+.++..+..++.+++... +......... ..+.+.....|...+...+..|++ .+++.++. .+..+|
T Consensus 209 ~~l~~~~~l~~~~~~l~~~~---------~~~~~~~~~~-l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~G 276 (310)
T TIGR01272 209 RYLAFNAFLAVLLSIGAALT---------HGYVAMWFVL-ALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVG 276 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHc---------CCHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhc
Confidence 98887777666665444331 1111222222 222222334566667777776654 56777775 678899
Q ss_pred HHHHHHHHHHHHHhhCcchhhHhHHH
Q 009536 470 NFLVGLFFLDLVETFGVAPVYAGFGG 495 (532)
Q Consensus 470 ~~i~~~~~g~l~~~~g~~~~~~~~~~ 495 (532)
++++|.+.|.+.|..|.+..+++...
T Consensus 277 g~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 277 GAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred chHHHHHHHHHHHhccchHHHHHHHH
Confidence 99999999999999998777764433
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.80 E-value=2.1e-17 Score=156.32 Aligned_cols=335 Identities=17% Similarity=0.141 Sum_probs=225.5
Q ss_pred hHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc----cch-hHHHHHhhHHHHHHHHHHHhhhc------HH
Q 009536 110 IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGC-RRTFQIDTIPLILGAIISAQAHS------LD 178 (532)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~a~~------~~ 178 (532)
+-.+.+.+|+ ++..+|.+..+--+--++.-|+.|.++|| +|| |+.++.+.+..++.+.++-.+++ ..
T Consensus 36 l~fYTdv~Gi--s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ 113 (467)
T COG2211 36 LFFYTDVFGL--SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLI 113 (467)
T ss_pred HHHHhcccCC--cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchH
Confidence 3466788899 89989999988888889999999999996 676 55666677888888888877763 44
Q ss_pred HHHHHHHHHhhhhhhhhhhhhHhhhhcCC-cccccchhhHhHHHHHHHHHHHHHhcCC----CCCC--cchhHHHHHhhH
Q 009536 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIP----AEDD--PHWWRTMLYIAS 251 (532)
Q Consensus 179 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~----l~~~--~~~wr~~f~~~~ 251 (532)
..++.-.+.+++.........++..|..+ ++||.+..++-+.+..+|..+...+... +.+. ..+|+..-++.+
T Consensus 114 ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~ 193 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLG 193 (467)
T ss_pred HHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHH
Confidence 46667888899999888888899999886 6889999999998888886554433322 2222 113888888888
Q ss_pred HHHHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHH
Q 009536 252 LPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIG 330 (532)
Q Consensus 252 ~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (532)
+++++..+..++ .+|.+.. .. ..++..+.+.+..+..+++++.++...+.
T Consensus 194 vi~~i~~l~~~~~v~ER~~~---~~--------------------------~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~ 244 (467)
T COG2211 194 VIGVILLLFCFFNVKERVVE---TQ--------------------------PTKTGVKLKLKDSFLLIFKNRPLLLLLLM 244 (467)
T ss_pred HHHHHHHHHHHHHhhcccCc---cc--------------------------cCcccccccHHHHHHHHHccchHHHHHHH
Confidence 877776655554 3343210 00 00000111222234456677766555443
Q ss_pred HHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHH
Q 009536 331 GALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVG 408 (532)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 408 (532)
.++.............+|..+. .+.. ...........+.+++.++..++.+|+|+|+++.++.++.+++.+++.+
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~y~---lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f 321 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVTYV---LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYF 321 (467)
T ss_pred HHHHHHHHHHHhhhhheeEEEE---cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333333333333322 2322 3345555566677777899999999999999999999999999888887
Q ss_pred HhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccC-------ccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 009536 409 ATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSS-------NRTRGKIMGFSFSVHWVCNFLVGLFFLDL 480 (532)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 480 (532)
.+ .+...+..+..+..+.+. ...++.+++++|..+ .+..|..+|...++.-+|.+++..+.|++
T Consensus 322 ~~--------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 322 TP--------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred hc--------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 122233333323333333 345777788887753 44568899999999999999999999999
Q ss_pred HHhhCc
Q 009536 481 VETFGV 486 (532)
Q Consensus 481 ~~~~g~ 486 (532)
.+..||
T Consensus 394 L~~~Gy 399 (467)
T COG2211 394 LGAIGY 399 (467)
T ss_pred HHHcCC
Confidence 988875
No 114
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.80 E-value=1.2e-18 Score=164.84 Aligned_cols=396 Identities=17% Similarity=0.192 Sum_probs=234.6
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccch-hHHHHHhh
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDT 161 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Gr-r~~l~~~~ 161 (532)
+..|+.+.+..+.+++.....+++.+..-.+.++++.+.+....||+.++..++.+++++.+|++..|.+. |+.++.|.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 34566688888889999999999888887777887666688899999999999999999999999999997 88999999
Q ss_pred HHHHHHHHHH-Hhh---h-cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCC
Q 009536 162 IPLILGAIIS-AQA---H-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (532)
Q Consensus 162 ~~~~~~~~~~-~~a---~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 236 (532)
++..+++++. +++ + ..+.++++|++.|+|.| .....-+|+++....++|.++++....+..+|.++||.++..+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 9999999998 433 3 67889999999999976 6677788999988888899999999888888888887776544
Q ss_pred CCCc------------chhHHHHHhhHHHHHHHHHHhc-ccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHH
Q 009536 237 EDDP------------HWWRTMLYIASLPGFILALGMQ-FTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLV 303 (532)
Q Consensus 237 ~~~~------------~~wr~~f~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (532)
.... +.+-.+-|+.+++.++.++... ++.|.++.-..+..+. + ++
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~--------------------~--~~ 246 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRS--------------------V--EE 246 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcccccccc--------------------c--hh
Confidence 3211 1134556777777776655544 4555543110000000 0 00
Q ss_pred HHhccCCCcchhhhhhcCCcc-hHHHHHHHHHHH-hhhcchhhHHHhHHHHHHHcCCC---hhHHHHHHHHHHHHHH---
Q 009536 304 IKKDGSDLDSQWSELLEEPHS-RVAFIGGALFLL-QQFAGINGVLYFSSLTFQDVGIT---DGALASLLVGVTNFAG--- 375 (532)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--- 375 (532)
.+ .-.+-.+.++. +...+.+.+..+ ..+..........+......+.. ..........+.+++.
T Consensus 247 ~~--------~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~ 318 (488)
T KOG2325|consen 247 EK--------SDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVIL 318 (488)
T ss_pred hc--------cchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHH
Confidence 00 00011111111 222222222222 22222221222222222222222 2222222223333322
Q ss_pred hhhhHhhh-hhcCCchhhhhhHHHHHHHHHHHHHHhcCCC------C--------------ccchhhHHHHHHHHHHHHH
Q 009536 376 ALCASYLM-DKEGRQKLLIGSYLGMAISMLLVVGATSLPL------D--------------EDFSHNLSILGTLFYIFTF 434 (532)
Q Consensus 376 ~~~~g~l~-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------~~~~~~~~~~~~~~~~~~~ 434 (532)
.+...... .++.+|..+..+..+......+......+.. . ..............+...+
T Consensus 319 ~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~ 398 (488)
T KOG2325|consen 319 LLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVF 398 (488)
T ss_pred HHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhhee
Confidence 22222222 2334455555443333333222211100000 0 0000001111111112222
Q ss_pred hccc---ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeec
Q 009536 435 AIGA---GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 435 ~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
+.+. .....+..+|...|..+++..|++......+..++|.+...++...|+++.+.+.++..++...+...+.+
T Consensus 399 g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~ 476 (488)
T KOG2325|consen 399 GIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLK 476 (488)
T ss_pred ccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 23345667788899999999999999999999999999999999999998887777666665555444433
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.77 E-value=9.2e-17 Score=150.39 Aligned_cols=415 Identities=15% Similarity=0.108 Sum_probs=259.5
Q ss_pred HHHHHHHhhhhhhccc-cccchhHHHHHhhC----CCCChhHHHHHHHHHHHHHHHHHHhhhccccc-cchhHHHHHhhH
Q 009536 89 VLIASMSNFLFGYHIG-VMNGPIVSIAKELG----FEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTI 162 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~ 162 (532)
+..+...-+..-++.. +-.+..-++..+++ . ++++..-+.+.|..-.-+..+++|+++|| .|+|+.+.+|.+
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~--~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGF--DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCc--ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 5555555566655553 33444456666666 7 77777778888888888899999999999 599999999999
Q ss_pred HHHHHHHHHHhhh--cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcc--cccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 163 PLILGAIISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 163 ~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
+..+|.++.+.+. +...++++-.+.++|.|..=+....++.|.+|++ +|-..++++.++.++|..++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999999984 7889999999999999999999999999999854 37788999999999999999999999999
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcccccC---------hhHHhhcCChhHHHHHH----HHH----cCCcchHHHHHHH-
Q 009536 239 DPHWWRTMLYIASLPGFILALGMQFTVES---------PRWLCKGGMLNDAKAVI----ANL----WGESEINKAIEEF- 300 (532)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~- 300 (532)
..+ |+..|.+.++-....++..+..++. |..+..+.......... ... ...+.........
T Consensus 181 ~~g-~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 259 (498)
T COG3104 181 NYG-WHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVIS 259 (498)
T ss_pred hhC-HHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 9999998887777666655444321 11111111110000000 000 0000000000000
Q ss_pred -HH-----HHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHc--CCC-hhHHHHHHHHHH
Q 009536 301 -QL-----VIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDV--GIT-DGALASLLVGVT 371 (532)
Q Consensus 301 -~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~ 371 (532)
.. .+....++.....++++ ..-+.++...+++..+.-..+.+..|.....++. |.+ ...+......+.
T Consensus 260 i~~~~~~~~~~~~~~~~~~er~r~~---~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~ 336 (498)
T COG3104 260 ILIAIIYFAEAFRSPKVFDERRRLL---AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFF 336 (498)
T ss_pred HHHHHHHHHHHhccCccHHHHHHHH---HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHH
Confidence 00 00000000000101110 1112223333333333334444445544443222 222 446677777777
Q ss_pred HHHHhhhhHhhhhhcCCc-------hhhhhhHHHHHHHHHHHHHHhcCCCC-ccchhhHHHHHHHHHHHHHhcccccccc
Q 009536 372 NFAGALCASYLMDKEGRQ-------KLLIGSYLGMAISMLLVVGATSLPLD-EDFSHNLSILGTLFYIFTFAIGAGPVTG 443 (532)
Q Consensus 372 ~~~~~~~~g~l~d~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (532)
-++..++..++..+.+++ .-+.++..+++.+++++......... ....+.++++...++....-....|+..
T Consensus 337 Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGL 416 (498)
T COG3104 337 IILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGL 416 (498)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHH
Confidence 777777777777774433 12445666666666666554222211 2334445555555555666677788888
Q ss_pred cccccccCccccchhHHHHHHHHHHHHHHHHHHHHH------HHHhhCcchhhHhHHHHHHHHHHhhheeec
Q 009536 444 LVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLD------LVETFGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 444 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
+++....|+...+..++........+..++..+.+. ..+.......|...+...++..+......|
T Consensus 417 s~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 417 SMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999999998888777777777776662 344455667777777777766665544433
No 116
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=6.8e-16 Score=141.29 Aligned_cols=351 Identities=17% Similarity=0.155 Sum_probs=225.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHH-HhhHHHHHHHHHHHhhhc--H-HHHHHHHHHHhhhhhhhhhh
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQ-IDTIPLILGAIISAQAHS--L-DEMLWGRFLVGLGIGVNTVL 197 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~~a~~--~-~~l~~~r~l~G~~~g~~~~~ 197 (532)
+.+..+...++..+..++..|+.|.++|+.|+||... ....+..+..++..++++ + +..+++-.+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 4456788888899999999999999999999765554 445555566666666654 4 44556778889999999999
Q ss_pred hhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhc------C----CC-C-------CCcchhHHHHHhhHHHHHHHHH
Q 009536 198 VPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG------I----PA-E-------DDPHWWRTMLYIASLPGFILAL 259 (532)
Q Consensus 198 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~------~----~l-~-------~~~~~wr~~f~~~~~~~~~~~~ 259 (532)
..+++.+..++++-++..++-.....+|..+.-++. + .. . +... -|..+.+.++..++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~ri~~~l~A~W~li~~i 214 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED-VRITGLLAALWWLLFAL 214 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc-chhHHHHHHHHHHHHHh
Confidence 999999999998877777665555555544433331 1 00 0 2222 68888888887777655
Q ss_pred HhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhh
Q 009536 260 GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQF 339 (532)
Q Consensus 260 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (532)
-.++..+++.... ....++ ..+.-++...+++++.+++.....++.. +...
T Consensus 215 Pm~~~v~~~~~~~--~~~~~~-----------------------l~~g~k~L~~t~k~i~~~~~i~~FLiA~----~~~~ 265 (438)
T COG2270 215 PMILNVHDAEKIS--SPPPTA-----------------------LRNGFKELKSTFKEIRGRKNLVLFLIAR----FFYI 265 (438)
T ss_pred HHHhccccccccc--ccchHH-----------------------HHHHHHHHHHHHHHHhcccchHHHHHHH----HHHH
Confidence 5544433322100 000000 0000011123445555555433333332 3333
Q ss_pred cchhhHHHhHHHHHH-HcCCChh--HHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCc
Q 009536 340 AGINGVLYFSSLTFQ-DVGITDG--ALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDE 416 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (532)
-+.+....+...+.. ++|.++. .+......+..++|+++.|++.||+|.|+++..+.++..+..+...+.
T Consensus 266 DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~------- 338 (438)
T COG2270 266 DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL------- 338 (438)
T ss_pred hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc-------
Confidence 355555556555555 5676644 566667789999999999999999999999888887776666555441
Q ss_pred cchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCc-chhhHhHHH
Q 009536 417 DFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGV-APVYAGFGG 495 (532)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~-~~~~~~~~~ 495 (532)
......+...++.+.+..+.....-++..+.+|+++.++.+|+++........+||...+.+.+..|. +..+.....
T Consensus 339 --~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~v 416 (438)
T COG2270 339 --EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIV 416 (438)
T ss_pred --cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHH
Confidence 11222233333333334445677789999999999999999999999999999999999999988874 344444444
Q ss_pred HHHHHHHhhheeeccCC
Q 009536 496 VSLLSALFAYYFIVETK 512 (532)
Q Consensus 496 ~~~~~~~~~~~~~~~~~ 512 (532)
+..++.++ +...|..+
T Consensus 417 ll~iGl~~-L~~v~~~~ 432 (438)
T COG2270 417 LLLIGLLL-LLRVKVPG 432 (438)
T ss_pred HHHhhHhh-EEeecCCC
Confidence 44444443 34444443
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.72 E-value=1.1e-14 Score=134.06 Aligned_cols=333 Identities=18% Similarity=0.153 Sum_probs=219.4
Q ss_pred HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccc-----hhHHHHH-hhHHHHHHHHHHHhh-----h-----
Q 009536 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-----CRRTFQI-DTIPLILGAIISAQA-----H----- 175 (532)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~a-----~----- 175 (532)
.|..|+++ .....+.+.++..+.. ...+.+|+.+|+.+ ||..+++ |.++...+..+..++ .
T Consensus 5 VMIvEL~v--pA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~ 81 (403)
T PF03209_consen 5 VMIVELGV--PAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQS 81 (403)
T ss_pred hHHHHhcc--HHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 46788998 8888888888877665 46999999999999 7766655 555555555555542 2
Q ss_pred ---cH-H--HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009536 176 ---SL-D--EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (532)
Q Consensus 176 ---~~-~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~ 249 (532)
.+ + ...+.-.+.|+|.+...+...+++.|..++++|+++.++.....-+|.+++..+.+.+.+.+..-|..-.+
T Consensus 82 ~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 82 SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 22 2 23445688899999999999999999999999999999999999999999999998777665433433333
Q ss_pred hHHH--HHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHH
Q 009536 250 ASLP--GFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVA 327 (532)
Q Consensus 250 ~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (532)
.... .++..++..+-.|.+.. .. ....++++......++++..+|..++.
T Consensus 162 ~~~a~i~~~l~~ia~wg~E~r~~-~~---------------------------~~~~~~~~~~f~~a~~~~~~~~~a~~f 213 (403)
T PF03209_consen 162 QGVALIALLLNLIALWGQEPRRS-RR---------------------------AAAAERPRPPFREAWRQVWASPQARRF 213 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccCCc-cc---------------------------ccCCCCCCccHHHHHHHHHhCCChhHH
Confidence 2222 22222222333332210 00 001112233344567777788887777
Q ss_pred HHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhh-hcCCchhhhhhHHHHHHHHHHH
Q 009536 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMD-KEGRQKLLIGSYLGMAISMLLV 406 (532)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~ 406 (532)
+...++..+..+.--..+-.|.-..+ ++...+........+.+.+++....|++.. |.++++...++....++++.++
T Consensus 214 ~~fl~l~t~a~~~QD~iLEPygg~Vf-gmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 214 FVFLFLGTLAFFMQDVILEPYGGEVF-GMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHHhhHHHcCCchhHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 66655554432222222222222111 223335567777888888888888888776 6788888888888888888777
Q ss_pred HHHhcCCCCccchhhHHHHHHHHHHHHHhcccc-cccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 407 VGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
...... ...+.+-..++..+++.|.. ....+.+.++..+++.|..+|.....+.+...++..+.|.+.|.
T Consensus 293 i~a~~~-------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 293 ILAGPL-------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHhc-------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 664332 12333444444555555553 22335566777888899999999999999999999999988875
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.71 E-value=1.3e-15 Score=150.39 Aligned_cols=305 Identities=17% Similarity=0.144 Sum_probs=211.2
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 166 (532)
..+.++++..+..++....+...+..+.+.|++ +..+.|++.+.|-++..+...+..+..-|.-|-+.+-+|++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i--~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKI--SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC--CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 346777777888888888999999999999999 888899999999999999999999999999999999999999999
Q ss_pred HHHHHHhh--------------------h-----------------------------c--HH-HHHHHHHHHhhhhhhh
Q 009536 167 GAIISAQA--------------------H-----------------------------S--LD-EMLWGRFLVGLGIGVN 194 (532)
Q Consensus 167 ~~~~~~~a--------------------~-----------------------------~--~~-~l~~~r~l~G~~~g~~ 194 (532)
+++++++= + + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99999751 0 0 22 4667899999999999
Q ss_pred hhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc------------------chhHHHHHhhHHHHHH
Q 009536 195 TVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP------------------HWWRTMLYIASLPGFI 256 (532)
Q Consensus 195 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------~~wr~~f~~~~~~~~~ 256 (532)
++.+.+|+-|...+++-...+|+......+|.++|.++|+++...+ |-|..-|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998764311 1277788888888888
Q ss_pred HHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHH
Q 009536 257 LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLL 336 (532)
Q Consensus 257 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (532)
..+.++++|++.+.-.+ + +..++....++... .++......+.-++.....+.+++++ +++...+...
T Consensus 335 ~a~p~f~fPk~lp~~~~---~----~~~~~~~~~k~~~~-~~~~~~~~~~~ikdfp~s~~~ll~N~----if~~~~l~~~ 402 (735)
T KOG3626|consen 335 SAVPLFFFPKELPKSQK---R----KRARDLHVLKTESG-GAKSDKTFGKKIKDFPKSIKRLLSNP----IFMLVVLASV 402 (735)
T ss_pred HHHHHHhCcccCccccc---c----chhhhhcccccccc-cccCCcchhhhHHHHHHHHHHHhcCc----hHHHHHHHHH
Confidence 88888888865321100 0 00000000000000 00000000000011123445556665 4555556666
Q ss_pred hhhcchhhHHHhHHHHHHHc-CCCh--hHHHH-HHHHHHHHHHhhhhHhhhhhcC--CchhhhhhHHHHHHHHHH
Q 009536 337 QQFAGINGVLYFSSLTFQDV-GITD--GALAS-LLVGVTNFAGALCASYLMDKEG--RQKLLIGSYLGMAISMLL 405 (532)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~-~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~ 405 (532)
.....+.....|+|.|++.. +.++ +..+. .+...+..+|.+++|++..|+. .|....+..+...+..+.
T Consensus 403 ~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 403 IESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 66677888899999999754 5543 23333 2233455678889999999875 344444444444443333
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.69 E-value=1.7e-16 Score=158.85 Aligned_cols=183 Identities=15% Similarity=0.113 Sum_probs=140.4
Q ss_pred cccchhHHHH-HhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHH---HHhhhcHHHH
Q 009536 105 VMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII---SAQAHSLDEM 180 (532)
Q Consensus 105 ~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~---~~~a~~~~~l 180 (532)
.....+|.+. +++|. +..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+
T Consensus 268 ~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (490)
T PRK10642 268 MLLTYMPSYLSHNLHY--SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLI 345 (490)
T ss_pred HHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 3344556544 56787 6667788888889999999999999999999999998887655443332 2234567788
Q ss_pred HHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009536 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (532)
Q Consensus 181 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (532)
+++|++.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+..++|+..+++..+.+++.++.
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 88999999888777777888889999999999999975444455567788888877665444788877777777777777
Q ss_pred hcccccChhHHhhc-----CChhHHHHHHHHHcC
Q 009536 261 MQFTVESPRWLCKG-----GMLNDAKAVIANLWG 289 (532)
Q Consensus 261 ~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~ 289 (532)
.+++||+|+|+.++ ++.+++.+.+.++++
T Consensus 426 ~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 426 GVTMKETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred HHHhccccCCCCCCccccccchhhHHHHhhcccc
Confidence 77789999987754 888999999888864
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.65 E-value=1.3e-17 Score=164.95 Aligned_cols=383 Identities=15% Similarity=0.155 Sum_probs=3.0
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
++.+++..+......+.....+..+++.|++ +..+.|++.+.|-++..+..++..++.+|..|-+.+-+|.+++++++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l--~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~ 82 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGL--SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGS 82 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHH
Confidence 4555666666677778888899999999999 99999999999999999999999999999888888999999999999
Q ss_pred HHHHhh----h----------------------------------------------cHHHHHHHHHHHhhhhhhhhhhh
Q 009536 169 IISAQA----H----------------------------------------------SLDEMLWGRFLVGLGIGVNTVLV 198 (532)
Q Consensus 169 ~~~~~a----~----------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~ 198 (532)
+++++= + -+..++++.++.|+|....++.+
T Consensus 83 ~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG 162 (539)
T PF03137_consen 83 LLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG 162 (539)
T ss_dssp ---------------------------------------------------------------------SSS--------
T ss_pred HHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce
Confidence 988740 0 12447788999999999999999
Q ss_pred hHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc---------------------chhHHHHHhhHHHHHHH
Q 009536 199 PIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------------------HWWRTMLYIASLPGFIL 257 (532)
Q Consensus 199 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~~ 257 (532)
.+|+-|..++++-+..+|++.+...+|.++|.++++.+...+ |-|..-|++.+.+.++.
T Consensus 163 ~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ 242 (539)
T PF03137_consen 163 ITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLS 242 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998765321 11556666677777776
Q ss_pred HHHhcccccCh-hHHhhcCChhHHHHHHHHHcCCcchHHHHHHHH--HHHHhccCCCcchhhhhhcCCcchHHHHHHHHH
Q 009536 258 ALGMQFTVESP-RWLCKGGMLNDAKAVIANLWGESEINKAIEEFQ--LVIKKDGSDLDSQWSELLEEPHSRVAFIGGALF 334 (532)
Q Consensus 258 ~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (532)
.+..+++|+.- +....++..+..++.. ++...+...+.+ ....+.-+......+.++++|. ++...+.
T Consensus 243 aipl~~FPk~lp~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~----f~~~~la 313 (539)
T PF03137_consen 243 AIPLFFFPKKLPGTSERQEEKESSERKE-----EDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPV----FMCLILA 313 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHcCCccCCCcccccchhhhhhcch-----hhhhhhcccccccccchhhhhhhHHHHHHHHhcChH----HHHHHHH
Confidence 67777777542 2100000000000000 000000000000 0001112223344555666664 4444445
Q ss_pred HHhhhcchhhHHHhHHHHHHHc-CCC--hhHHHH-HHHHHHHHHHhhhhHhhhhhcC--CchhhhhhHHHHHHHHHHHH-
Q 009536 335 LLQQFAGINGVLYFSSLTFQDV-GIT--DGALAS-LLVGVTNFAGALCASYLMDKEG--RQKLLIGSYLGMAISMLLVV- 407 (532)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~-~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~- 407 (532)
..........+..+.|.|++.. +.+ .+.+.. .....+..+|.+++|++.+|++ .|..+....+...++.+++.
T Consensus 314 ~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~ 393 (539)
T PF03137_consen 314 GVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSP 393 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666778888899998753 333 333333 2333466788999999999974 34444444444433333311
Q ss_pred --HH--hc-------CCC---------C----------------------ccc-hhhHHHHHHH-HHHHH-Hhccccccc
Q 009536 408 --GA--TS-------LPL---------D----------------------EDF-SHNLSILGTL-FYIFT-FAIGAGPVT 442 (532)
Q Consensus 408 --~~--~~-------~~~---------~----------------------~~~-~~~~~~~~~~-~~~~~-~~~~~~~~~ 442 (532)
+. .. .+. . +.. ........+. ++... .+....|.
T Consensus 394 ~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~- 472 (539)
T PF03137_consen 394 LFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPS- 472 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccch-
Confidence 10 00 000 0 000 0111111111 11111 12222343
Q ss_pred ccccccccCccccchhHHHHHHHHH-HHHHHHHHHHHHHHHh
Q 009536 443 GLVIPELSSNRTRGKIMGFSFSVHW-VCNFLVGLFFLDLVET 483 (532)
Q Consensus 443 ~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~i~~~~~g~l~~~ 483 (532)
....-..+|+++|+.+.|+...+.. +|.+-+|.++|.+.|.
T Consensus 473 ~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 473 TLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------
T ss_pred heeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 3445578899999999999987765 5667899999999986
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.61 E-value=2e-15 Score=124.00 Aligned_cols=134 Identities=21% Similarity=0.326 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcc
Q 009536 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK 209 (532)
Q Consensus 130 ~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 209 (532)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009536 210 YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (532)
Q Consensus 210 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
+|++..++.+....+|..+++.+++.+.+..+ |++.|++.++..++..+...++
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999988777 9999999888777765555443
No 122
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.58 E-value=1.6e-13 Score=132.46 Aligned_cols=359 Identities=18% Similarity=0.133 Sum_probs=223.1
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHH----HHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIF----IAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
.......+-.|..++......+..+.....++.+.+. ..+...... .+...+..+..|.++||+|||..+.+.++
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~-~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQL-ENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccc-hhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3344555555666666666666666666666543222 223334443 67778899999999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHhhhh--hhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc
Q 009536 163 PLILGAIISAQAHSLDEMLWGRFLVGLGI--GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (532)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~--g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 240 (532)
...+..+...+.. +| +++ +.|+.. +.......++++|....++|....++.......+..++|.+++.+....
T Consensus 101 ~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~ 175 (463)
T KOG2816|consen 101 GTILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL 175 (463)
T ss_pred HHHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 9998888888776 33 333 344332 3566778889999999999999999999999999999999999988877
Q ss_pred chhHHHHHhhHHHHHHHHHHh-cccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhh
Q 009536 241 HWWRTMLYIASLPGFILALGM-QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELL 319 (532)
Q Consensus 241 ~~wr~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
+ .-..|.+..+..++..+.. .++||+-.. +.+.+ + ....... .+.........++...
T Consensus 176 ~-~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~-~-----~~~~~~~-----------~~~~~~~~~~~~~~~~ 234 (463)
T KOG2816|consen 176 G-IALVFLIAAASGILSLLYMLLFLPESLQE---KERSD-A-----TLRELTP-----------GSLDSSHVADAFQSLT 234 (463)
T ss_pred C-chHHHHHHHHHHHHHHHHHhhccccccCc---ccccc-c-----cccccCC-----------Ccccchhhhhhhhhhc
Confidence 6 7788888888877766555 446665320 00000 0 0000000 0000000011111111
Q ss_pred cCCcchHHHHHHHHHH---Hhhhcchh-hHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhH-hhhhhcCCchhhhh
Q 009536 320 EEPHSRVAFIGGALFL---LQQFAGIN-GVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCAS-YLMDKEGRQKLLIG 394 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~ 394 (532)
+....+..+....... ........ ...+|+..-+ +.+..+.+...........++.++.. .+...++.|+....
T Consensus 235 ~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f-~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l 313 (463)
T KOG2816|consen 235 KVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKF-GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL 313 (463)
T ss_pred ccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeec-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH
Confidence 1111111111111111 11111111 1122222111 22333445556666666777766655 77778898888888
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHH
Q 009536 395 SYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG 474 (532)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~ 474 (532)
|.....+....+.+.. . .+..........+.....|...+..+...+++.+|++.++...+..+.+.++|
T Consensus 314 Gl~~~~~~~~~~af~~--------~--~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~ 383 (463)
T KOG2816|consen 314 GLLSEFLQLLLFAFAT--------E--TWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSP 383 (463)
T ss_pred HHHHHHHHHHHHHHhc--------c--chhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhH
Confidence 8888888888888732 1 22222233334444455677778888889999999999999999999999999
Q ss_pred HHHHHHHHh
Q 009536 475 LFFLDLVET 483 (532)
Q Consensus 475 ~~~g~l~~~ 483 (532)
.+.+.++..
T Consensus 384 ~~~~~i~~~ 392 (463)
T KOG2816|consen 384 ALYGNIFAL 392 (463)
T ss_pred HHHHHHHHH
Confidence 999988754
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.54 E-value=8.8e-15 Score=143.04 Aligned_cols=160 Identities=13% Similarity=0.076 Sum_probs=129.9
Q ss_pred chhHHHHHhhCCCC------ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhh----cH
Q 009536 108 GPIVSIAKELGFEG------NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH----SL 177 (532)
Q Consensus 108 ~~~~~~~~~~~~~~------~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~----~~ 177 (532)
...+...++.|.+. .....+...++..++..++.++.|+++||+|+|+++.++.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44455566666421 235668999999999999999999999999999999999999988877776632 34
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhH-HHHHHHHHHHHHhcCCCCCCcc-----hhHHHHHhhH
Q 009536 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH-----WWRTMLYIAS 251 (532)
Q Consensus 178 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~-----~wr~~f~~~~ 251 (532)
+.+++.+++.|++.+...+....++.|++|+++|+++.++.+ ...++|.++||+++|.+.+..+ +|+..|++.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 667788999999999888999999999999999999999997 6789999999999999887632 2999999888
Q ss_pred HHHHHHHHHhcc-cccC
Q 009536 252 LPGFILALGMQF-TVES 267 (532)
Q Consensus 252 ~~~~~~~~~~~~-~~~~ 267 (532)
+..++..++.++ ++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 887776555544 4443
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.53 E-value=1.7e-13 Score=133.34 Aligned_cols=155 Identities=17% Similarity=0.141 Sum_probs=129.3
Q ss_pred chhH-HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHH
Q 009536 108 GPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (532)
Q Consensus 108 ~~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 186 (532)
...| .+++++|. ++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~--~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHL--PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3455 45567888 78888988888888888899999999999999998888777666665555567788888889999
Q ss_pred HhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccccc
Q 009536 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (532)
Q Consensus 187 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
.+++.|...+....+..|.+|++ |++++++++....+|..+++.+++.+.+..+ |+..|++.+++.++.++..++.+|
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99888887778888889999864 9999999999999999999999999988877 999999988888887777766654
No 125
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.53 E-value=6.8e-13 Score=129.32 Aligned_cols=356 Identities=15% Similarity=0.110 Sum_probs=207.7
Q ss_pred chhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-----chhHHHHHhhHHHHHHHHHHHhh----hcHH
Q 009536 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRTFQIDTIPLILGAIISAQA----HSLD 178 (532)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~a----~~~~ 178 (532)
+..+.+.+++|+ ++.+.....+...+...+ .+++|.++|.+ .||+-++++.++..++.+.++.. .+..
T Consensus 11 ~~~~~l~~~l~l--s~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGL--SPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 456788999999 899888888888887755 77899999987 36667777777776666666653 3566
Q ss_pred HHHHHHHHHhhhhhhhhhhhhHhhhhcCC--cccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHH
Q 009536 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAP--TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (532)
Q Consensus 179 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~ 256 (532)
...++-++..+|......++-+++.|... +++||...+.......+|.+++..++|.+.+..+ +|+.|.+.+++.++
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPLL 166 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHH
Confidence 67777888899999999999999999884 3347788888888999999999999999998888 99999988877777
Q ss_pred HHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHH-HHHHHH
Q 009536 257 LALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFI-GGALFL 335 (532)
Q Consensus 257 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 335 (532)
..+..+++.|+.+ +.+.++... ...+ ........ .++.....++.++.+..+...+ ..++..
T Consensus 167 ~~~~~~~~~~e~~----~~~~~~~~~----~~~~-~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~~~~~~~~~ 229 (433)
T PF03092_consen 167 MLIVALFLLEERK----VRPADEVFS----FGKE-EVPCLFGS--------FREQLSELWRALQQRAIWQPILFFIFFFN 229 (433)
T ss_pred HHHHHHHhhhhcc----ccccchhhc----cccc-ccchhhHH--------HHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 6655555554311 000000000 0000 00000000 0001122334444444443333 111111
Q ss_pred HhhhcchhhHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHH-HhcC
Q 009536 336 LQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVG-ATSL 412 (532)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 412 (532)
...........++........+.+.. +....+..++.++|..+......+..-|+++....++..+..+.-.. ...+
T Consensus 230 ~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~ 309 (433)
T PF03092_consen 230 LPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRW 309 (433)
T ss_pred hccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEE
Confidence 11111111011222111111113322 33444455666666666666555566666665555444333222111 0000
Q ss_pred CCCc-cchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009536 413 PLDE-DFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 485 (532)
Q Consensus 413 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 485 (532)
...- -.+.+..+.-..+.-........|. ...++|++|+..-|+.+++...+.|+|..++..+...+.+..|
T Consensus 310 n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~-lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 310 NLDLGIPDQWFALGDTILEEVIGMIAFMPS-LVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred eeeeCcCCeEEEEEhHHHHHHHHHHHHHHH-HHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0000 0011212222222222223333343 3667899999999999999999999999999999999988776
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=9.4e-14 Score=142.04 Aligned_cols=140 Identities=14% Similarity=-0.024 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcC
Q 009536 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (532)
Q Consensus 127 ~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 206 (532)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++++++.|++.++.++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34455667888999999999999999999999999999999999999998888889999999988889999999999999
Q ss_pred CcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccCh
Q 009536 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (532)
Q Consensus 207 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (532)
|.++|++++|+..+...+|.++||++++.+.... ...+|++.++..++.+++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT--KAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999998776542 56788888777777777777778763
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.53 E-value=9.8e-14 Score=136.12 Aligned_cols=158 Identities=21% Similarity=0.142 Sum_probs=134.4
Q ss_pred chhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHH
Q 009536 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLV 187 (532)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 187 (532)
..+|.+.++.|. +..+.+++.+.+.++..++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+.+.-++.
T Consensus 241 ~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 241 NWLPSLLVGQGL--SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHHhCCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 346777788888 888889999999999999999999999999999999988777777777777788888888888899
Q ss_pred hhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccC
Q 009536 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (532)
Q Consensus 188 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (532)
|++.+...+...+++.|.+|+++|++..++.+....+|..+||.+++.+.+..++|...+++.....++..+..+++.++
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVSR 398 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99888888889999999999999999999999999999999999999998876557777877776666665555544443
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.53 E-value=5.3e-14 Score=138.44 Aligned_cols=145 Identities=14% Similarity=0.044 Sum_probs=126.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHh
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~ 201 (532)
+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999999999999999998888888899
Q ss_pred hhhcCCcccccchhhH-hHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcc-cccC
Q 009536 202 ISEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF-TVES 267 (532)
Q Consensus 202 i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~~~ 267 (532)
+.|.+|++.|+...+. ++....+|.++++.+.|++.+..| ||..|++.+++.++..+..++ .+++
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999988887665 677788999999999999999888 999999888877665544443 4443
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.52 E-value=4.9e-14 Score=136.86 Aligned_cols=148 Identities=18% Similarity=0.065 Sum_probs=127.7
Q ss_pred chhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcH--HHHHHHHH
Q 009536 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL--DEMLWGRF 185 (532)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~ 185 (532)
...+.+.++++. +..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+.++. ..+++..+
T Consensus 226 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 226 GLYKPYGQSLGL--SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 345556778887 78888999999999999999999999999999999999999999888888777643 33456678
Q ss_pred HHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHH
Q 009536 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (532)
Q Consensus 186 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 258 (532)
+.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ |++.|++.+++.++..
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 88888888888888899999999999999999999999999999999999988888 9999998877766543
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.50 E-value=2.7e-13 Score=130.23 Aligned_cols=170 Identities=25% Similarity=0.343 Sum_probs=149.3
Q ss_pred HHHHhhhhhhccccccchhHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhH-HHHHhhHHHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIAKEL-GFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRR-TFQIDTIPLILGAI 169 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~ 169 (532)
..+..+.............|.+.++. |. +..+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGL--SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 33334444555556666667666665 77 8889999999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009536 170 ISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (532)
Q Consensus 170 ~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~ 249 (532)
...+.++.+.+++..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+ |++.|++
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~ 336 (352)
T cd06174 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLI 336 (352)
T ss_pred HHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988777 9999999
Q ss_pred hHHHHHHHHHHhccc
Q 009536 250 ASLPGFILALGMQFT 264 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~ 264 (532)
.+++.++..+...++
T Consensus 337 ~~~~~~i~~i~~~~~ 351 (352)
T cd06174 337 LAALALLAALLLLLL 351 (352)
T ss_pred HHHHHHHHHHHheec
Confidence 999888877665543
No 131
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.48 E-value=3.6e-13 Score=131.76 Aligned_cols=156 Identities=17% Similarity=0.106 Sum_probs=132.1
Q ss_pred cchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHH
Q 009536 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (532)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 186 (532)
...++.+.++.|. + +.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++
T Consensus 236 ~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 236 ATFITLYYAARGW--D--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHHHHccc--c--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3444555555554 3 34667788889999999999999999999999999999999888888888888888899999
Q ss_pred HhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccccc
Q 009536 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (532)
Q Consensus 187 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 266 (532)
.|++.+...+.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+..+ |++.|++.+...++..+..+++++
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998888888888899999999999999999999999999999999888777 999999988888777666665555
Q ss_pred C
Q 009536 267 S 267 (532)
Q Consensus 267 ~ 267 (532)
+
T Consensus 391 ~ 391 (399)
T PRK05122 391 R 391 (399)
T ss_pred c
Confidence 4
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.47 E-value=4.5e-13 Score=129.89 Aligned_cols=166 Identities=12% Similarity=-0.027 Sum_probs=140.1
Q ss_pred HHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHH
Q 009536 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (532)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (532)
...+..++.......+....|.+.+|+|. ++.+.|++.+...++..++.++.+++.||+|+|+.+.++.++.++..++
T Consensus 209 ~~l~~~~l~~~~~~~~~~~~~~~l~~~g~--s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~ 286 (382)
T TIGR00902 209 RFLAAVCLIQGAHAAYYGFSAIYWQAAGI--SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAI 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 33334444444454455566767778888 8899999999999999999999999999999999999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhH-HHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009536 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (532)
Q Consensus 171 ~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~ 249 (532)
.+++++.+.+++.+++.|+..+...+....++.+. |+++|++..++++ ...++|.++|+.++|.+.+..+ + ..|++
T Consensus 287 ~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~ 363 (382)
T TIGR00902 287 IGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVF 363 (382)
T ss_pred HHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHH
Confidence 99999999999999999999999999999999998 9888999999986 5788999999999999999887 6 56777
Q ss_pred hHHHHHHHHHHh
Q 009536 250 ASLPGFILALGM 261 (532)
Q Consensus 250 ~~~~~~~~~~~~ 261 (532)
.+++.++..++.
T Consensus 364 ~~~~~~~~~~~~ 375 (382)
T TIGR00902 364 MAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHH
Confidence 677666555443
No 133
>PRK12382 putative transporter; Provisional
Probab=99.46 E-value=4.9e-13 Score=130.46 Aligned_cols=152 Identities=12% Similarity=0.075 Sum_probs=130.3
Q ss_pred cchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHH
Q 009536 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (532)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 186 (532)
....+.+.++.+. +. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++
T Consensus 236 ~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 236 GTFVSLYFASKGW--AM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHhcCC--ch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 3444555566665 43 4566777888889999999999999999999999999999998888888888888899999
Q ss_pred HhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcc
Q 009536 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (532)
Q Consensus 187 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
.|++.+...+.....+.|.+|+++|+++.++++....+|..++|.+.+.+.+..+ |++.|++.+++.++..+..++
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHh
Confidence 9999998888888889999999999999999999999999999999999998888 999999988877776655543
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=3.8e-13 Score=132.14 Aligned_cols=159 Identities=16% Similarity=0.160 Sum_probs=132.0
Q ss_pred ccccchhHHHHHhhCCCCC--hhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHH
Q 009536 104 GVMNGPIVSIAKELGFEGN--PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEML 181 (532)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~ 181 (532)
....+.++.+.++.+.+.+ ....+++.+++.++..++.+.+|+++||+|||+.+..+..+..++.+...+.++.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344555655555433111 12346677778888889999999999999999999999998888888888888888899
Q ss_pred HHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009536 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (532)
Q Consensus 182 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (532)
+.+++.|++.+...+...+++.+..++++|++.+++.+....+|..+||.+++.+.+..+ |++.|++.+++.++..+..
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988888 9999999988887766655
Q ss_pred cc
Q 009536 262 QF 263 (532)
Q Consensus 262 ~~ 263 (532)
++
T Consensus 395 ~~ 396 (408)
T PRK09874 395 WN 396 (408)
T ss_pred HH
Confidence 44
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.46 E-value=1e-12 Score=127.55 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=128.0
Q ss_pred HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhh
Q 009536 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (532)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 191 (532)
.+.+++|. ++.+.+++.+.......++.++.|++.||+|||+++.++.++..+..+...+.++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGL--PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577888 7888898888887777888999999999999999999888777766666667788888888999999999
Q ss_pred hhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccc
Q 009536 192 GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTV 265 (532)
Q Consensus 192 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
+...+....++.|..|++ ++++.++++....+|..++|.+++.+.+..+ |+..|++.++..++..+...+++
T Consensus 303 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHheec
Confidence 988888888999998765 6799999999999999999999999988877 99999998888887776665554
No 136
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=4.7e-13 Score=132.56 Aligned_cols=164 Identities=15% Similarity=0.087 Sum_probs=131.8
Q ss_pred HHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc--chhHHHHH--hhHHHHHHHH
Q 009536 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL--GCRRTFQI--DTIPLILGAI 169 (532)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~--Grr~~l~~--~~~~~~~~~~ 169 (532)
+..++..+........+|.+.+++|. +..+.+++.+++.++..+++++.|+++||. ++|+...+ +.++.+++.+
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~l 325 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKDKGV--DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHL 325 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444566777788888 888999999999999999999999999983 44443333 3444455556
Q ss_pred HHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHh
Q 009536 170 ISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (532)
Q Consensus 170 ~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~ 249 (532)
++.+.++++.+++.+++.|++.+...+...+++.|.+|++++++.+++++....+|..+||.++|.+.+..++|++.|++
T Consensus 326 l~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 326 LCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred HHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHH
Confidence 66778899999999999999999999999999999999999999999999999999999999999998876559999999
Q ss_pred hHHHHHHHHH
Q 009536 250 ASLPGFILAL 259 (532)
Q Consensus 250 ~~~~~~~~~~ 259 (532)
.+++.++..+
T Consensus 406 ~~~~~li~~~ 415 (455)
T TIGR00892 406 SGSIVVSAGL 415 (455)
T ss_pred hhHHHHHHHH
Confidence 8887665544
No 137
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=5.6e-12 Score=117.31 Aligned_cols=172 Identities=16% Similarity=0.118 Sum_probs=140.2
Q ss_pred HHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHH
Q 009536 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLL 405 (532)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 405 (532)
++...+..+..........-.+|.+-++.+.+ .+++..+.++++..++.++...+.||+.||++++....+++++.++
T Consensus 15 l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l 94 (394)
T COG2814 15 LLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLL 94 (394)
T ss_pred HHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 33334444444455566677788888999887 5689999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009536 406 VVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 484 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 484 (532)
..+.+ +...+.+.=+..+... .++++...+..++.|+++|+++.++......++..+|.++..++-|.+
T Consensus 95 ~alAp----------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~ 164 (394)
T COG2814 95 SALAP----------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF 164 (394)
T ss_pred HHHhc----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 88832 2233333323333333 345777888999999999999999999999999999999999999999
Q ss_pred CcchhhHhHHHHHHHHHHhhheeec
Q 009536 485 GVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 485 g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
||+..|+..+++.++..+..+..+|
T Consensus 165 GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 165 GWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988888888
No 138
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.41 E-value=3.5e-12 Score=125.83 Aligned_cols=165 Identities=16% Similarity=0.131 Sum_probs=121.4
Q ss_pred HhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCC
Q 009536 336 LQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLP 413 (532)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (532)
+..+........+.|.+.++.+.+ +.++......++..++.++.|++.||+|+|+.+.++.++.+++.+++...
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---- 108 (434)
T PRK11663 33 ALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS---- 108 (434)
T ss_pred HHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH----
Confidence 333333345566778888888776 44777778889999999999999999999999999988888887776652
Q ss_pred CCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHh
Q 009536 414 LDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAG 492 (532)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~ 492 (532)
.....+.. ..+..+.+.+ ..+....++.|.+|+++|++++|+.+...++|..+++.+.+.+.+..||+..|.+
T Consensus 109 -----~~~~~l~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~ 182 (434)
T PRK11663 109 -----SSLWAFAL-LWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMI 182 (434)
T ss_pred -----hHHHHHHH-HHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 22222222 2222222222 2455667888999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhheeecc
Q 009536 493 FGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~ 510 (532)
.+++.++..++..+..++
T Consensus 183 ~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 183 AGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 877666554444444443
No 139
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.41 E-value=9e-12 Score=113.14 Aligned_cols=249 Identities=15% Similarity=0.077 Sum_probs=158.5
Q ss_pred hccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHH
Q 009536 101 YHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEM 180 (532)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l 180 (532)
......+|..-.+-+++|. +..+++.+...-+....+..++.|.++||+|||+.-++.+++.+++++ +-..++++.+
T Consensus 48 ~aDWLQGpY~Y~LY~~yg~--~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L 124 (354)
T PF05631_consen 48 AADWLQGPYLYALYESYGF--SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVL 124 (354)
T ss_pred HHHHhhcchhHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHH
Confidence 3444555666556678999 999999999999999999999999999999999999999999998886 4556889999
Q ss_pred HHHHHHHhhhhhhhhhhhhHhhh-hcC----CcccccchhhHhH-HHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHH
Q 009536 181 LWGRFLVGLGIGVNTVLVPIYIS-EVA----PTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLP 253 (532)
Q Consensus 181 ~~~r~l~G~~~g~~~~~~~~~i~-~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~-~wr~~f~~~~~~ 253 (532)
+++|++.|++.+..+.+--+++. |.- |++..+..++... .++++-.+++.+++.++.+..+ +-..+|....+.
T Consensus 125 ~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~ 204 (354)
T PF05631_consen 125 LLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVL 204 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHH
Confidence 99999999999999998887753 432 2222233333222 2233334455555555544333 136778877777
Q ss_pred HHHHHHHhcc-cccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHH
Q 009536 254 GFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGA 332 (532)
Q Consensus 254 ~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (532)
.++..++... -+|+.. +..+ .. +..+..+..++.+.++++ .+....
T Consensus 205 l~~~~~~I~~~W~ENyg------~~~~-------------~~-----------~~~~~~~~a~~~i~~d~r---il~LG~ 251 (354)
T PF05631_consen 205 LAVAAVLILKTWPENYG------DTSS-------------SS-----------SLSGSFREAWRAILSDPR---ILLLGL 251 (354)
T ss_pred HHHHHHHHHhcccccCC------Cccc-------------cc-----------chHHHHHHHHHHHHcCch---hHHHHH
Confidence 7666555443 233321 0000 00 000001123344555554 344445
Q ss_pred HHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhh
Q 009536 333 LFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDK 385 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 385 (532)
...++....+..+..|.|.+-.+.....-|+++..+.++.++|+.+..++..+
T Consensus 252 ~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 252 IQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55555566666666667765421122245888888888889998888665554
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.40 E-value=2.7e-12 Score=125.60 Aligned_cols=170 Identities=22% Similarity=0.162 Sum_probs=121.5
Q ss_pred HHHHHHHhhhhhhccccccchhHHH-HHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhH--HHH------H
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRR--TFQ------I 159 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~--~l~------~ 159 (532)
+....+..+.............|.+ .+++|. +..+.+++.+...++..++.++.|+++||+|||+ ... .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (399)
T TIGR00893 217 VWGLALGQFLVNIGLGFFLTWFPTYLVQERGL--SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAII 294 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc--cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Confidence 3444444455555555555556654 456787 8888999999999999999999999999999996 111 1
Q ss_pred hhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 160 DTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 160 ~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
+.++..+........++.+..+...++.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~ 373 (399)
T TIGR00893 295 AGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT 373 (399)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence 111111112222222344444444555555544 7889999999999999999999999999999999999999999887
Q ss_pred cchhHHHHHhhHHHHHHHHHHh
Q 009536 240 PHWWRTMLYIASLPGFILALGM 261 (532)
Q Consensus 240 ~~~wr~~f~~~~~~~~~~~~~~ 261 (532)
.+.|++.|++.++..++..+..
T Consensus 374 ~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 374 TGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CCchhHHHHHHHHHHHHHHHHH
Confidence 6658999988887776655544
No 141
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.40 E-value=2.7e-12 Score=127.97 Aligned_cols=172 Identities=17% Similarity=0.081 Sum_probs=126.0
Q ss_pred HHHHHHHhhhhhhccccccchhHH-HHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
++.+++..++...........+|. +.+++|. +..+.++..+.+.++..++.+++|+++||+|||+.+.....+..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGF--SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 444455555544444444555664 5567888 8888899999999999999999999999999998877665544443
Q ss_pred HHH--HHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHH-HHHHHHHhcCCCCC------
Q 009536 168 AII--SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL-GIITSLFLGIPAED------ 238 (532)
Q Consensus 168 ~~~--~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~------ 238 (532)
..+ ....++.+.+.+++++.|++...........+.|.+|+++||.+.|+.+....+ |..++|.+.|.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 322 233456777778888888654433333345677999999999999999988886 77899999998888
Q ss_pred ------CcchhHHHHHhhHHHHHHHHHHhcc
Q 009536 239 ------DPHWWRTMLYIASLPGFILALGMQF 263 (532)
Q Consensus 239 ------~~~~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
..+ |+..|++.++..++..+..++
T Consensus 418 ~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 418 PIFGYTLTG-WAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccccccC-hHHHHHHHHHHHHHHHHHHHH
Confidence 456 999999887777766555443
No 142
>PRK10054 putative transporter; Provisional
Probab=99.40 E-value=8.2e-12 Score=121.44 Aligned_cols=163 Identities=11% Similarity=0.024 Sum_probs=115.4
Q ss_pred hcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCC
Q 009536 339 FAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLD 415 (532)
Q Consensus 339 ~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (532)
..+......+++.+++ +.+.+ +.++......++.+++.++.|+++||+|||+.+..+.++.+++.+++.+.
T Consensus 20 ~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~------ 93 (395)
T PRK10054 20 TIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV------ 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH------
Confidence 3344455555565554 45766 45777777888899999999999999999999988888877777766552
Q ss_pred ccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHH
Q 009536 416 EDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGG 495 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~ 495 (532)
++...................+....+..|..|+++|+++.|+.+...++|.+++|.+.+.+.+ .||+..|.+.++
T Consensus 94 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~ 169 (395)
T PRK10054 94 ---NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAI 169 (395)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHH
Confidence 2222222222122212122345566778899999999999999999999999999999998875 689999988777
Q ss_pred HHHHHHHhhheeeccC
Q 009536 496 VSLLSALFAYYFIVET 511 (532)
Q Consensus 496 ~~~~~~~~~~~~~~~~ 511 (532)
+.++..++..+..++.
T Consensus 170 ~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 170 CSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 7766655544444433
No 143
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=1.3e-12 Score=128.46 Aligned_cols=158 Identities=15% Similarity=0.051 Sum_probs=133.9
Q ss_pred cchhHHHHHh-hCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHH
Q 009536 107 NGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (532)
Q Consensus 107 ~~~~~~~~~~-~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 185 (532)
...+|.+.++ +|. +..+.|++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.+
T Consensus 243 ~~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQM--GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCC--ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3455666666 888 7888999999999999999999999999988888888888888888888888888888888999
Q ss_pred HHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHH-HHHhccc
Q 009536 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFIL-ALGMQFT 264 (532)
Q Consensus 186 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~-~~~~~~~ 264 (532)
+.|++.+...+...+++.|..|++.|+++++++.....+|..+|+.+.|.+.+..+ ++..+++.+...++. .+.....
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999888888888899999999999999999999999999999999999998877 788887766665554 4444445
Q ss_pred ccC
Q 009536 265 VES 267 (532)
Q Consensus 265 ~~~ 267 (532)
++.
T Consensus 400 ~~~ 402 (417)
T PRK10489 400 GEL 402 (417)
T ss_pred ccc
Confidence 554
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.39 E-value=2.3e-12 Score=125.06 Aligned_cols=151 Identities=14% Similarity=0.156 Sum_probs=125.4
Q ss_pred chhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHH
Q 009536 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLV 187 (532)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 187 (532)
..+|.+.++.|. +..+.+++.+.+.++..+++++.|++.||+|+|+++..+..+.+++.+... . ...+....++.
T Consensus 221 ~~lp~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGM--SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 346777777787 788889999999999999999999999999999999988888777665443 2 23445677888
Q ss_pred hhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009536 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (532)
Q Consensus 188 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
|++.....|...+++.|..|+++++.+.+.+....++|..+||.++|++.++.+ |++.|.+.+...++..+..++.
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHhc
Confidence 888888889999999999998888888888888999999999999999998888 9999999888877666555544
No 145
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.39 E-value=1e-11 Score=121.55 Aligned_cols=178 Identities=12% Similarity=0.033 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHH
Q 009536 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAIS 402 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 402 (532)
+..++...+.++..+.......+..+.+.++.+.+ +.++......++..++.+..|++.||+|||+++..+.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 33444444444455555555666667666777666 4577888888999999999999999999999999998888888
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 403 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
.++..+. .+...+...- +..+.+.+ ..+....++.|.+|+++|+++.|+.+....+|..+++.+.+.+.
T Consensus 87 ~~~~~~~---------~~~~~l~~~r-~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 87 STATMFA---------TGPESLYLLR-ILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHh---------cCHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777662 2222222222 22333333 34666677899999999999999999999999999999999887
Q ss_pred H------hhCcchhhHhHHHHHHHHHHhhheeeccCC
Q 009536 482 E------TFGVAPVYAGFGGVSLLSALFAYYFIVETK 512 (532)
Q Consensus 482 ~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (532)
+ ..||+..|.+.++..++..++.++++||++
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 5 358999999888777776666666677654
No 146
>PRK03545 putative arabinose transporter; Provisional
Probab=99.39 E-value=9e-12 Score=121.38 Aligned_cols=156 Identities=15% Similarity=0.058 Sum_probs=117.7
Q ss_pred HHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHH
Q 009536 346 LYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLS 423 (532)
Q Consensus 346 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (532)
....|.+.++.+.+ +.++......++..++.+..|++.||+|||+++..+..+..++.+...+. ++...
T Consensus 29 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------~~~~~ 99 (390)
T PRK03545 29 VGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA---------WNFTV 99 (390)
T ss_pred HcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh---------ccHHH
Confidence 33467777777766 44677777778888889999999999999999999988888887777662 22222
Q ss_pred HHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHH
Q 009536 424 ILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSAL 502 (532)
Q Consensus 424 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (532)
+.. .-+..+.+.+ ..+....++.+.+|+++|+++.|+......+|..++|.+.+.+.+..||+..|++.+++.++..+
T Consensus 100 l~~-~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~ 178 (390)
T PRK03545 100 LLI-SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLL 178 (390)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHH
Confidence 222 2222333322 34556678889999999999999999999999999999999999999999999998887777665
Q ss_pred hhheeeccC
Q 009536 503 FAYYFIVET 511 (532)
Q Consensus 503 ~~~~~~~~~ 511 (532)
..+...|+.
T Consensus 179 ~~~~~~~~~ 187 (390)
T PRK03545 179 LLIKLLPLL 187 (390)
T ss_pred HHHHhCCCC
Confidence 555545543
No 147
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.39 E-value=1.6e-12 Score=127.04 Aligned_cols=161 Identities=17% Similarity=0.126 Sum_probs=122.4
Q ss_pred HHHhhhhhhccccccchhHHHH-HhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH--H
Q 009536 93 SMSNFLFGYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA--I 169 (532)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~--~ 169 (532)
....+............+|.+. +++|. +..+.+++.+.+.++..++.++.|+++||+|||+.+..+..+..+.. +
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 302 (394)
T TIGR00883 225 LGLVIATTTTFYLITTYLPTYLTQTLGL--SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL 302 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 3333444444444445566555 67787 78888999999999999999999999999999998876655544333 2
Q ss_pred HHHh--hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHh-HHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 009536 170 ISAQ--AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (532)
Q Consensus 170 ~~~~--a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~~wr~~ 246 (532)
...+ .++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++. +.+..+|..++|.+++.+.+..+.|++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~ 382 (394)
T TIGR00883 303 LMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAI 382 (394)
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhH
Confidence 2222 246777778889999999899999999999999999999999984 5667789999999999998876658877
Q ss_pred HHhhHHHHH
Q 009536 247 LYIASLPGF 255 (532)
Q Consensus 247 f~~~~~~~~ 255 (532)
++..+...+
T Consensus 383 ~~~~~~~~l 391 (394)
T TIGR00883 383 GYYLAALAL 391 (394)
T ss_pred HHHHHHHHH
Confidence 776655444
No 148
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=4.3e-12 Score=123.73 Aligned_cols=171 Identities=11% Similarity=0.028 Sum_probs=135.7
Q ss_pred HHHHhhhhhhccccccchhHHHH-HhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (532)
+.+..++.......+...+|.+. +++|. +..+.+++.+.+.++..++.++.|+++||++||+.+.....+..+..++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 287 (394)
T PRK03699 210 LAIAALLYILAQLTFISWVPEYAQKKFGM--SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYL 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 33333443333334445566555 66788 8888999999999999999999999999999999999888887777777
Q ss_pred HHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhh
Q 009536 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (532)
Q Consensus 171 ~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~ 250 (532)
....++.+.+.+..++.|++.+..++...++..+..+++ +++..+.......+|..++|.+.+++.+..+ |+..+++.
T Consensus 288 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~ 365 (394)
T PRK03699 288 FVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTA 365 (394)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhh
Confidence 777788877778888999988888888888888877644 6778888888899999999999999998888 99999988
Q ss_pred HHHHHHHHHHhccccc
Q 009536 251 SLPGFILALGMQFTVE 266 (532)
Q Consensus 251 ~~~~~~~~~~~~~~~~ 266 (532)
++..++..+.....++
T Consensus 366 ~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 366 NGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8877776665555443
No 149
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.37 E-value=1.1e-11 Score=120.85 Aligned_cols=162 Identities=16% Similarity=0.142 Sum_probs=121.9
Q ss_pred chhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccc
Q 009536 341 GINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF 418 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (532)
.........|.+.++.+.+ +.++......++..++.++.|++.||+|||+.+..+..+.+++.+.+...
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--------- 90 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS--------- 90 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH---------
Confidence 3344444567777777766 45777888889999999999999999999999999888888877776652
Q ss_pred hhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHH
Q 009536 419 SHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVS 497 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (532)
+.. .......+..+.+.+ ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..+.+.+++.
T Consensus 91 ~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 169 (385)
T TIGR00710 91 NNI-ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAG 169 (385)
T ss_pred ccH-HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 122 222222233333333 245667788999999999999999999999999999999999999999999998888777
Q ss_pred HHHHHhhheeeccCC
Q 009536 498 LLSALFAYYFIVETK 512 (532)
Q Consensus 498 ~~~~~~~~~~~~~~~ 512 (532)
++..+..++..||.+
T Consensus 170 ~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 170 ILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHhCCCCC
Confidence 776666655555544
No 150
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.37 E-value=4.6e-12 Score=123.80 Aligned_cols=168 Identities=15% Similarity=0.088 Sum_probs=126.1
Q ss_pred HHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHH-HhhHHHHHHHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQ-IDTIPLILGAII 170 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~ 170 (532)
..+..+.............|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+.+. .+.+..+++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~ 304 (402)
T TIGR00897 227 GGMVRIINTIGLFGFAVFLPMFVAELGF--STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLA 304 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 3333444444444445567778888888 7888899999999999999999999999999988764 333334443333
Q ss_pred HHh-----hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 009536 171 SAQ-----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (532)
Q Consensus 171 ~~~-----a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~ 245 (532)
+.+ .++++.++++.++.|++.+...+. ...+.|..| ++|+++.|+.+....+|..++|.+++.+.+..+ |+.
T Consensus 305 l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~ 381 (402)
T TIGR00897 305 LYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIG 381 (402)
T ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHH
Confidence 332 246777778899999988876554 456677655 579999999999999999999999999999888 999
Q ss_pred HHHhhHHHHHHHHHHhccc
Q 009536 246 MLYIASLPGFILALGMQFT 264 (532)
Q Consensus 246 ~f~~~~~~~~~~~~~~~~~ 264 (532)
.|++.++..++..+...|+
T Consensus 382 ~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 382 VVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999888877766655543
No 151
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=5.8e-12 Score=115.67 Aligned_cols=175 Identities=14% Similarity=0.104 Sum_probs=138.1
Q ss_pred HHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHH
Q 009536 327 AFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISML 404 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 404 (532)
.++...+.....+..--.+..-.|.+.++.+.+ +.+...+.+.+.-.++.++.|.++||.+.|..+..++++.++..+
T Consensus 30 if~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~ni 109 (448)
T COG2271 30 IFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNI 109 (448)
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHH
Confidence 344434443333444445556667777777666 558888889999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHH--HHHH
Q 009536 405 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF--LDLV 481 (532)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~--g~l~ 481 (532)
++.+ .....+..++...-+...+. +|.+...+.+-+|+++||+..++.|+..|+|+++.|++. +.+.
T Consensus 110 l~Gf----------s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 110 LFGF----------SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHhh----------hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 9988 33445555555555544444 477778888999999999999999999999999999999 9999
Q ss_pred HhhCcchhhHhHHHHHHHHHHhhheeeccC
Q 009536 482 ETFGVAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
++.+|+..|++-++++++..++.++..+++
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888999999999999988888877766544
No 152
>TIGR00895 2A0115 benzoate transport.
Probab=99.36 E-value=1e-11 Score=121.53 Aligned_cols=170 Identities=21% Similarity=0.222 Sum_probs=123.8
Q ss_pred HHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHH
Q 009536 332 ALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGA 409 (532)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 409 (532)
.+..+..........++.|.+.++.+.+ +.++......++..++.++.|+++||+|||+.+..+..+.+++.+++...
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 102 (398)
T TIGR00895 23 FLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA 102 (398)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 3333333334445566777777777766 44677777888899999999999999999999998888877777666552
Q ss_pred hcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcch
Q 009536 410 TSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAP 488 (532)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~ 488 (532)
.+. .......+..+++.+ ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+.
T Consensus 103 ---------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 172 (398)
T TIGR00895 103 ---------TNV-TQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRS 172 (398)
T ss_pred ---------cch-HHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccccee
Confidence 122 222223333333333 346677889999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHhhheeeccC
Q 009536 489 VYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
.+.+.+++.++..++.+.+.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCC
Confidence 98887666665555555555554
No 153
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.36 E-value=1.8e-11 Score=118.98 Aligned_cols=155 Identities=16% Similarity=0.104 Sum_probs=116.3
Q ss_pred HhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHH
Q 009536 347 YFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSI 424 (532)
Q Consensus 347 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (532)
...|.+.++.+.+ +.++......++..++.++.|++.||+|||+.+..+.++.+++.++..+. ++...+
T Consensus 41 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---------~~~~~l 111 (394)
T PRK10213 41 SLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA---------NSFSLL 111 (394)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH---------ChHHHH
Confidence 3456677777766 44777777888899999999999999999999999999988877776652 222222
Q ss_pred HHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHh
Q 009536 425 LGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALF 503 (532)
Q Consensus 425 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 503 (532)
.. .-+..+.+.+ ..+....++.|.+|+++|+.+.++.....+++..++|.+.+.+.+..||+..|++.+++.++..+.
T Consensus 112 ~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 112 LI-GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred HH-HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 22 2222333222 346677788899999999999999999999999999999999999999999998877766655544
Q ss_pred hheeeccC
Q 009536 504 AYYFIVET 511 (532)
Q Consensus 504 ~~~~~~~~ 511 (532)
.....|+.
T Consensus 191 ~~~~~p~~ 198 (394)
T PRK10213 191 IIKSLPSL 198 (394)
T ss_pred HHHHCCCC
Confidence 43334543
No 154
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.35 E-value=3.1e-12 Score=129.06 Aligned_cols=147 Identities=20% Similarity=0.091 Sum_probs=116.0
Q ss_pred ccchhHHHH-HhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh--hcHHHHHH
Q 009536 106 MNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--HSLDEMLW 182 (532)
Q Consensus 106 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~ 182 (532)
....+|.+. +++|. +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.++.... .+.+.+.+
T Consensus 294 ~~~~lp~~l~~~~g~--~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (496)
T PRK03893 294 IQALLPTYLKTDLGY--DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGL 371 (496)
T ss_pred HHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 345567666 58888 88899999999999999999999999999999999998887776665544433 33444445
Q ss_pred HHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009536 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (532)
Q Consensus 183 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (532)
..++.|+......+....++.|.+|+++|++++++......+|..+||.+++.+.+..+ |+..+.+.+....
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~~ 443 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFSLT 443 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHHH
Confidence 55555544444556677789999999999999999999999999999999999999888 8888766554433
No 155
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.35 E-value=1.2e-11 Score=120.44 Aligned_cols=165 Identities=12% Similarity=0.069 Sum_probs=126.7
Q ss_pred hhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhh-cH
Q 009536 99 FGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH-SL 177 (532)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-~~ 177 (532)
...........+|.+.+++|. +..+.|...+.+.++..++.++.|++.||+|||+.+..+..+.+++.++....+ +.
T Consensus 217 ~~~~~~~~~~~lp~~l~~~g~--s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 294 (393)
T PRK09705 217 INGGYASLIAWLPAFYIEIGA--SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQL 294 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchH
Confidence 333443444556666677888 888899999999999999999999999999999999999888877766655333 22
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHhhhhcCC-cccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHH
Q 009536 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (532)
Q Consensus 178 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~ 256 (532)
..+. -++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..++|...|++.++.+++
T Consensus 295 ~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 295 PVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred HHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 2222 345688888888877777777775 5779999999999999999999999999998876688888887777776
Q ss_pred HHHHh-cccccC
Q 009536 257 LALGM-QFTVES 267 (532)
Q Consensus 257 ~~~~~-~~~~~~ 267 (532)
..+.. .+.||+
T Consensus 373 ~~~~~~~~~~~~ 384 (393)
T PRK09705 373 LMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHhcccc
Confidence 55443 445554
No 156
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.33 E-value=1.4e-11 Score=119.54 Aligned_cols=149 Identities=13% Similarity=0.029 Sum_probs=124.0
Q ss_pred ccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHH
Q 009536 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (532)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 185 (532)
.....|.+.+|.|. +..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGY--SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 33445556677888 8888899999999999999999999999999999999999999998888888999999999999
Q ss_pred HHhhhhhhhhhhhhHhhhhcCCcccccchhhHhH-HHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHH
Q 009536 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (532)
Q Consensus 186 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 259 (532)
+.|++.+...+....++.+. +++++++..+++. ....+|..+||.++|.+.+..+ + ..|+..+.+.++.++
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHH
Confidence 99999999999999888887 5556788888886 5567888999999999999887 6 456666655554433
No 157
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.33 E-value=7.4e-11 Score=117.59 Aligned_cols=158 Identities=8% Similarity=-0.011 Sum_probs=108.8
Q ss_pred chhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccc
Q 009536 341 GINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF 418 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (532)
.......+.+.+.++.+.+. .++......++..++.++.|+++||+|||+.+..+.++.+++.++..+.
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--------- 121 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV--------- 121 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh---------
Confidence 33445556677777887763 3566666778888999999999999999999888887777776666552
Q ss_pred hhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH---------hhCcchh
Q 009536 419 SHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE---------TFGVAPV 489 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~---------~~g~~~~ 489 (532)
.+...+. +..+..+++.+.......++.|.+|+++|+.+.|+.+...++|..+++.+.+.+.. ..||+..
T Consensus 122 ~s~~~l~-~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 122 SSATGFI-AVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred cCHHHHH-HHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 1122222 22222233222222234567899999999999999998888888888777765532 1479999
Q ss_pred hHhHHHHHHHHHHhhheee
Q 009536 490 YAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~ 508 (532)
|.+.+++.++..++.+++.
T Consensus 201 f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9988888777666554443
No 158
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.33 E-value=9.3e-12 Score=125.15 Aligned_cols=179 Identities=13% Similarity=-0.010 Sum_probs=134.3
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 165 (532)
+..+....+..+.............|.+.+++|. +..+.++....+.++..++.++.|+++||+|||+.+.++.++.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 360 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV--STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMA 360 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 3344444444454444455555667888888898 66778899999999999999999999999999999999988888
Q ss_pred HHHHHHHhh-----h------cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcC
Q 009536 166 LGAIISAQA-----H------SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI 234 (532)
Q Consensus 166 ~~~~~~~~a-----~------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 234 (532)
++.++.++. + +...+....++.+.......+....++.|.+|+++|++++++.+....+|.++++.+.+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~ 440 (481)
T TIGR00879 361 ICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFP 440 (481)
T ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887776621 1 23333333333333333345666778899999999999999999999999999999999
Q ss_pred CCCCCcchhHHHHHhhHHHHHHHHHHhcc-cccC
Q 009536 235 PAEDDPHWWRTMLYIASLPGFILALGMQF-TVES 267 (532)
Q Consensus 235 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~~~ 267 (532)
.+.+..+ |++.|++.++++++..+..++ .+|+
T Consensus 441 ~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 441 TMLESIG-VGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HHHHhcC-ccceehhHHHHHHHHHHHHheecccC
Confidence 8888777 999999988888776665544 4543
No 159
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.32 E-value=2.1e-11 Score=122.26 Aligned_cols=176 Identities=13% Similarity=-0.019 Sum_probs=127.7
Q ss_pred HHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHH
Q 009536 327 AFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISML 404 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 404 (532)
.+...++..+....-.+....-.|.+.++.+.+ +.++....+.++..++.+..|+++||+|||+.+..+..+..++.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 344445555555555666777788888888765 557788888888889999999999999999999999999988888
Q ss_pred HHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccc-cCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 405 LVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPEL-SSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
+.... ++...++..-++.+....+..+.....+.+. .|+++|+++.|+......+|..+||.+.+.+.++
T Consensus 87 ~~~~a---------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 87 AAAFS---------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 87762 2222222222222222222334444445454 4678899999999999999999999999999999
Q ss_pred hCcchhhHhHHHHHHHHHHhhheeeccC
Q 009536 484 FGVAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
.||++.|++...+.++..++.+++.|+.
T Consensus 158 ~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 158 FYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999988877777666665556654
No 160
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.32 E-value=7.7e-11 Score=115.20 Aligned_cols=158 Identities=11% Similarity=0.079 Sum_probs=112.3
Q ss_pred hhcchhhHHHhHHHHHHH-cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhc-CCchhhhhhHHHHHHHHHHHHHHhcCC
Q 009536 338 QFAGINGVLYFSSLTFQD-VGIT--DGALASLLVGVTNFAGALCASYLMDKE-GRQKLLIGSYLGMAISMLLVVGATSLP 413 (532)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (532)
....++.+..+++.++.+ .+.+ +++.....+.....++.+++|+++||+ |||+.+.++.++..++.+++....
T Consensus 21 e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~--- 97 (493)
T PRK15462 21 EYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE--- 97 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh---
Confidence 333455566677777654 4655 446666777788888999999999999 999999999988888876654310
Q ss_pred CCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhh
Q 009536 414 LDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNR--TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVY 490 (532)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~ 490 (532)
...........+ ...+.+. .+...+++.|.+|++ +|+++.++.+...++|+.++|.+.+++.+..||+..|
T Consensus 98 ----~~~~~~~l~l~l--i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F 171 (493)
T PRK15462 98 ----IHPSFLYLSLAI--IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGF 171 (493)
T ss_pred ----cchhHHHHHHHH--HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHH
Confidence 011111111222 2223333 355567889999875 6999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhh
Q 009536 491 AGFGGVSLLSALFA 504 (532)
Q Consensus 491 ~~~~~~~~~~~~~~ 504 (532)
.+.++..+++.+..
T Consensus 172 ~iaaigm~l~li~~ 185 (493)
T PRK15462 172 GLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHHH
Confidence 88766555554443
No 161
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.31 E-value=2.8e-11 Score=118.06 Aligned_cols=170 Identities=18% Similarity=0.180 Sum_probs=123.4
Q ss_pred HHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHh
Q 009536 333 LFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 410 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (532)
...+.............|.+.++.+.+. .++......++..++.++.|+++||+|||+.+..+..+..++..++...
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~- 88 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA- 88 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-
Confidence 3333344444455566777778877764 4666777788889999999999999999999998888888777766652
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchh
Q 009536 411 SLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPV 489 (532)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~ 489 (532)
++...+.. ..+..+.+.+. .+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..||+..
T Consensus 89 --------~~~~~~~~-~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~ 159 (392)
T PRK10473 89 --------ETSSLFLA-GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSL 159 (392)
T ss_pred --------CcHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHH
Confidence 11222222 22223333332 355667888999999999999999999999999999999988888899999
Q ss_pred hHhHHHHHHHHHHhhheeeccCC
Q 009536 490 YAGFGGVSLLSALFAYYFIVETK 512 (532)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~ 512 (532)
+++.+++.++..++.+...+|++
T Consensus 160 ~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 160 FYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC
Confidence 98888777776666555555543
No 162
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.31 E-value=1.1e-11 Score=124.62 Aligned_cols=169 Identities=14% Similarity=0.060 Sum_probs=127.1
Q ss_pred HHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHh
Q 009536 333 LFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 410 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (532)
+..+.............|.+.++.+.+ +.++......++..++.++.|++.||+|||+.+..+..+..++.++....
T Consensus 9 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~- 87 (485)
T TIGR00711 9 LGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA- 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-
Confidence 333333444555666778888888765 45788888899999999999999999999999999988888877776552
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchh
Q 009536 411 SLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPV 489 (532)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~ 489 (532)
.+...+ ....+..+.+.+ ..+....++.|.+|+++|+++.++......+|..++|.+.+.+.++.||++.
T Consensus 88 --------~~~~~l-~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~ 158 (485)
T TIGR00711 88 --------PNLELM-IIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWI 158 (485)
T ss_pred --------CCHHHH-HHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceeh
Confidence 222222 223333333333 3466778889999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHhhheeeccC
Q 009536 490 YAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
|++.+.+.++..++..+..++.
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 159 FLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred hhhhhHHHHHHHHHHHHHcCCc
Confidence 9887777666665555555543
No 163
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.31 E-value=8.1e-11 Score=115.54 Aligned_cols=176 Identities=16% Similarity=0.069 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHH
Q 009536 325 RVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAIS 402 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 402 (532)
++.+....+..+.............+.+.++.+.+ +.++......++..++.++.|++.||+|||+.+..+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34444444444444445555666667777777665 4577778888999999999999999999999999888888877
Q ss_pred HHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhc-ccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 403 MLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
.++..+. .+...+ ....+..+.+. ...+....++.|.+|+++|+.+.++.+....+|..+++.+.+.+.
T Consensus 91 ~~~~~~~---------~~~~~l-~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 91 TLACGFA---------PGYITM-FIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHh---------ccHHHH-HHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766652 122222 22223333332 234556678889999999999999999999999999999999988
Q ss_pred HhhC--cchhhHhHHHHHHHHHHhhheeeccC
Q 009536 482 ETFG--VAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 482 ~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
+..+ |+..|.+.+...++.. +.....||.
T Consensus 161 ~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~ 191 (405)
T TIGR00891 161 PVWGDGWRALFFISILPIIFAL-WLRKNIPEA 191 (405)
T ss_pred HhcCccHHHHHHHHHHHHHHHH-HHHHhCCCC
Confidence 8776 8888876554444433 333344554
No 164
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.30 E-value=1.7e-11 Score=119.10 Aligned_cols=160 Identities=15% Similarity=0.180 Sum_probs=119.6
Q ss_pred hhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccch
Q 009536 342 INGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 419 (532)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (532)
...+....|.+.++.+.+ +.++......++..++.++.|+++||+|||+.+..+..+..++.+++.+. .
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------~ 81 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS---------T 81 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh---------h
Confidence 344455566666666665 55788888899999999999999999999999999998888888777662 2
Q ss_pred hhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHH-HHHHHHHHhhCcchhhHhHHHHH
Q 009536 420 HNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVG-LFFLDLVETFGVAPVYAGFGGVS 497 (532)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~-~~~g~l~~~~g~~~~~~~~~~~~ 497 (532)
+. ....+..+..+.+.+ ..+....++.|.+|+++|+++.++.+....+|..+++ .+.+.+.+..+|+..|++.+++.
T Consensus 82 ~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SL-WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hH-HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 22 222223333333333 3567778899999999999999999999999999999 46666667788999988888777
Q ss_pred HHHHHhhheeeccC
Q 009536 498 LLSALFAYYFIVET 511 (532)
Q Consensus 498 ~~~~~~~~~~~~~~ 511 (532)
++..++.+++.++.
T Consensus 161 ~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 161 IIVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHHheeeCCC
Confidence 77666666666554
No 165
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.30 E-value=1.8e-10 Score=107.82 Aligned_cols=344 Identities=13% Similarity=0.073 Sum_probs=199.7
Q ss_pred HHHHHh-hCCCCChhHH-HHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHh
Q 009536 111 VSIAKE-LGFEGNPILE-GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVG 188 (532)
Q Consensus 111 ~~~~~~-~~~~~~~~~~-~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 188 (532)
|.+.+. .|+ +..|+ .-+.-...-.+....++...+.|..|.|++++++.+...+...+..+.++...+-+..++-|
T Consensus 28 ~yL~~~~kn~--T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 28 PYLTGPDKNF--TEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG 105 (412)
T ss_pred HHHcCCccCC--CHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 444443 566 55554 34555666677788999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHHHHHHHHHhcccccC
Q 009536 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQFTVES 267 (532)
Q Consensus 189 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (532)
++.+ ...+.++++-...++++-.++.+...+...+|-.++.++|..+....+ ..+...++......+.++..+++|..
T Consensus 106 ~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 106 LATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9987 477788899999999988999999999898998888888887765322 26777777666666667777777765
Q ss_pred hhHHhhcCChhHHHHHHHHHcCC--cchHHHHHHHHHHHHhccCC-------CcchhhhhhcCCcchHHHHHHHHHHHhh
Q 009536 268 PRWLCKGGMLNDAKAVIANLWGE--SEINKAIEEFQLVIKKDGSD-------LDSQWSELLEEPHSRVAFIGGALFLLQQ 338 (532)
Q Consensus 268 p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (532)
++-..-+++...... ..+.... ++..+...+..+.....+.. ....+++..+++. ++...+.+...
T Consensus 185 ~~S~~f~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~----ll~WSlWWa~a 259 (412)
T PF01770_consen 185 KRSLFFHRKPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPR----LLLWSLWWAFA 259 (412)
T ss_pred CcccceeccCccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCch----HHHHHHHHHHH
Confidence 542211111100000 0000000 00000000000000000000 0112233334443 33334444455
Q ss_pred hcchhhHHHhHHHHHHHcCCC-----hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHH--HHHHHHHHHhc
Q 009536 339 FAGINGVLYFSSLTFQDVGIT-----DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMA--ISMLLVVGATS 411 (532)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~--~~~~~~~~~~~ 411 (532)
.+++..+..|.....++...+ -.|.+-....+.+.++.+..|++..++.+..-+.++..-.. ..++++...
T Consensus 260 tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t-- 337 (412)
T PF01770_consen 260 TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT-- 337 (412)
T ss_pred HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 556667777777777766111 12555666667777788888888666555444333333222 223333321
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHH
Q 009536 412 LPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNF 471 (532)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 471 (532)
.+.+......+++...+.. ..++....++.....+.-|..+|+.+++..+-..
T Consensus 338 ------~~Iwv~Y~~yIif~~~y~f-liTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQt 390 (412)
T PF01770_consen 338 ------GNIWVCYAGYIIFRSLYMF-LITIASFQIAKNLSEERYALVFGINTFVALVLQT 390 (412)
T ss_pred ------hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccccceeeeeeeHHHHHHHHHH
Confidence 1222222222222222222 2333344444555566678888877665544333
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.30 E-value=4.1e-11 Score=116.32 Aligned_cols=162 Identities=14% Similarity=0.060 Sum_probs=120.7
Q ss_pred chhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccc
Q 009536 341 GINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF 418 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (532)
.........|.+.++.+.+ +.++......++..++.++.|++.||+|||+.+..+..+.+++.++..+.
T Consensus 18 ~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~--------- 88 (382)
T PRK10091 18 AEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS--------- 88 (382)
T ss_pred hHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh---------
Confidence 3344555667777777766 45778888899999999999999999999999999999888888777662
Q ss_pred hhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHH
Q 009536 419 SHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVS 497 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (532)
++...+.. .-+..+.+.+. .+.....+.+.+|+++|+.+.++......++..+++.+.+.+.+..||+..|.+.+++.
T Consensus 89 ~~~~~l~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~ 167 (382)
T PRK10091 89 SSYLMLAI-GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFN 167 (382)
T ss_pred CcHHHHHH-HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHH
Confidence 22222222 22233333222 34455667888899889999999999999999999999999999899999999888777
Q ss_pred HHHHHhhheeeccCC
Q 009536 498 LLSALFAYYFIVETK 512 (532)
Q Consensus 498 ~~~~~~~~~~~~~~~ 512 (532)
++..+..+...|+.+
T Consensus 168 ~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 168 IAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHhCCCCC
Confidence 666655555566543
No 167
>PRK10504 putative transporter; Provisional
Probab=99.30 E-value=5.6e-11 Score=118.97 Aligned_cols=169 Identities=13% Similarity=-0.003 Sum_probs=122.4
Q ss_pred HHHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHH
Q 009536 332 ALFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGA 409 (532)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 409 (532)
....+.............|.+.++.+.+. .++......++..++.++.|+++||+|||+.+..+..+..++.++....
T Consensus 16 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 95 (471)
T PRK10504 16 AFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS 95 (471)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh
Confidence 33334444445556667888888888774 3566677778888999999999999999999988877777776655441
Q ss_pred hcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcch
Q 009536 410 TSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAP 488 (532)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~ 488 (532)
.+...+ ....+..+.+.+ ..+....++.|.+|+++|+++.|+.+...++|..++|.+.|.+.+..||++
T Consensus 96 ---------~~~~~l-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~ 165 (471)
T PRK10504 96 ---------GTLNEL-LLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHW 165 (471)
T ss_pred ---------CCHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHH
Confidence 112222 222222333322 345667778899999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHhhheeecc
Q 009536 489 VYAGFGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~ 510 (532)
.|.+...+..+..++.....++
T Consensus 166 ~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 166 IFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 9988777666666555444444
No 168
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.29 E-value=1.6e-11 Score=121.54 Aligned_cols=159 Identities=21% Similarity=0.174 Sum_probs=138.6
Q ss_pred hhccccccchhHHHH-HhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHH
Q 009536 100 GYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLD 178 (532)
Q Consensus 100 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~ 178 (532)
++....+...+|.+. +++|. ++...|++.+++.+|..++.++.+++.+|+++++++..+.++++++.+..+++++.+
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~--~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~ 308 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGG--GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFW 308 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHH
Confidence 333444445677665 45777 888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHH
Q 009536 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (532)
Q Consensus 179 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 258 (532)
..+++-++.|++.........+.+.+..|++.|||+++++.+....+..+|.++.|.+.+..+ -+..+.+.++..++..
T Consensus 309 ~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 309 LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888 8888887776555544
Q ss_pred HHh
Q 009536 259 LGM 261 (532)
Q Consensus 259 ~~~ 261 (532)
++.
T Consensus 388 ~~~ 390 (524)
T PF05977_consen 388 LIA 390 (524)
T ss_pred HHH
Confidence 433
No 169
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.29 E-value=5.4e-11 Score=113.96 Aligned_cols=159 Identities=11% Similarity=0.032 Sum_probs=112.2
Q ss_pred hHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhh
Q 009536 344 GVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHN 421 (532)
Q Consensus 344 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (532)
.+....|.+.++.+.+ +.++....+.++..++.+..|+++||+|||+++.........+...... ...
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~----------~~~ 78 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLD----------PFN 78 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH----------hcc
Confidence 4455667777777766 4467777788899999999999999999988765544433333221111 011
Q ss_pred HHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHH
Q 009536 422 LSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (532)
...+...-+..+.+.+..+.......|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..|.+.+++.++..
T Consensus 79 ~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 79 YEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 22222232333333333333445557889999999999999999999999999999999999999999998888887777
Q ss_pred HhhheeeccCC
Q 009536 502 LFAYYFIVETK 512 (532)
Q Consensus 502 ~~~~~~~~~~~ 512 (532)
++.++..||..
T Consensus 159 ~~~~~~lp~~p 169 (368)
T TIGR00903 159 ILVLAALPALP 169 (368)
T ss_pred HHHHHHcCCCC
Confidence 76666777643
No 170
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.29 E-value=4.4e-11 Score=115.54 Aligned_cols=159 Identities=17% Similarity=-0.000 Sum_probs=114.7
Q ss_pred hhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccch
Q 009536 342 INGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 419 (532)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (532)
........|.+..+.+.+ +.++......++..++.++.|+++||+|||+.+..+..+..++..++....... ..
T Consensus 15 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~----~~ 90 (365)
T TIGR00900 15 TAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG----GL 90 (365)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC----CC
Confidence 334444556666666555 457777888899999999999999999999999988887777766665532110 00
Q ss_pred hhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHH
Q 009536 420 HNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSL 498 (532)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (532)
+...+.. ..+..+.+.+ ..+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..||+..|++.++..+
T Consensus 91 ~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 169 (365)
T TIGR00900 91 NIWQVYV-LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFA 169 (365)
T ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 2222222 2222233333 3466778899999999999999999999999999999999999999999999887776665
Q ss_pred HHHHhhh
Q 009536 499 LSALFAY 505 (532)
Q Consensus 499 ~~~~~~~ 505 (532)
+..+..+
T Consensus 170 ~~~~~~~ 176 (365)
T TIGR00900 170 ISALLIV 176 (365)
T ss_pred HHHHHHH
Confidence 5544443
No 171
>PRK09952 shikimate transporter; Provisional
Probab=99.28 E-value=3.3e-11 Score=118.97 Aligned_cols=154 Identities=15% Similarity=0.080 Sum_probs=113.9
Q ss_pred HHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHh---h-hcHHHHHHHHHHH
Q 009536 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ---A-HSLDEMLWGRFLV 187 (532)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a-~~~~~l~~~r~l~ 187 (532)
.+.+++|. +......+.....+...++.++.|+++||+|||++++.+.++.+++.+.+.. . ++.+.+++..++.
T Consensus 276 y~~~~~g~--s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (438)
T PRK09952 276 YSTQNLGL--PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLA 353 (438)
T ss_pred HHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 44567787 6655555555666677888999999999999999999887766655443332 2 2344455566777
Q ss_pred hhhhhhhhhhhhHhhhhcCCcccccchhhHhH-HHHHHHHHHHHHhcCCCCCCc-chhHHHHHhhHHHHHHHHHHhcccc
Q 009536 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDP-HWWRTMLYIASLPGFILALGMQFTV 265 (532)
Q Consensus 188 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~ 265 (532)
|++.+...+...+++.|.+|.+.|+...++.. .+..+|..++|.+.+++.+.. ++|+..+...++..++..+..+.++
T Consensus 354 ~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 354 NIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence 88888888888999999999999988888854 455689999999999887643 2388888887777777666666565
Q ss_pred cC
Q 009536 266 ES 267 (532)
Q Consensus 266 ~~ 267 (532)
|+
T Consensus 434 ~~ 435 (438)
T PRK09952 434 DN 435 (438)
T ss_pred cc
Confidence 53
No 172
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.28 E-value=1.8e-10 Score=114.47 Aligned_cols=161 Identities=9% Similarity=0.012 Sum_probs=118.1
Q ss_pred HHHhhhcchhhHHHhHHHHHHH---cCCC--hhHHHHHHHHHHHHHHhhhhHhhhhh-cCCchhhhhhHHHHHHHHHHHH
Q 009536 334 FLLQQFAGINGVLYFSSLTFQD---VGIT--DGALASLLVGVTNFAGALCASYLMDK-EGRQKLLIGSYLGMAISMLLVV 407 (532)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~ 407 (532)
..+.....++....+++.++++ .+.+ +++.....+.++..++.+++|+++|| +|||+++.++..+.+++.+++.
T Consensus 18 ~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~ 97 (475)
T TIGR00924 18 VELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 3333344555666677777765 4554 56788888889999999999999999 8999999999999988887776
Q ss_pred HHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 408 GATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNR---TRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
+. ..... ........+.+.+. .+....++.+.+|++ +|+++.++.+...++|..++|.+.+.+.+.
T Consensus 98 ~~---------~~~~~-~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~ 167 (475)
T TIGR00924 98 MS---------IYPDL-IFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN 167 (475)
T ss_pred hc---------ccHhH-HHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh
Confidence 62 11222 22222233344433 466667788888765 388999999999999999999999999999
Q ss_pred hCcchhhHhHHHHHHHHHHhh
Q 009536 484 FGVAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~ 504 (532)
.||+..|.+.++..+++.+..
T Consensus 168 ~g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 168 YGYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred cChHHHHHHHHHHHHHHHHHH
Confidence 999999988776555554443
No 173
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.27 E-value=2e-11 Score=117.33 Aligned_cols=157 Identities=19% Similarity=0.150 Sum_probs=116.9
Q ss_pred hhHHHhHH-HHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccch
Q 009536 343 NGVLYFSS-LTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 419 (532)
Q Consensus 343 ~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (532)
.......+ .+.++.+.+ +.++......++..++.++.|+++||+|||+.+..+..+.+++.++..+. .+
T Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------~~ 84 (352)
T PF07690_consen 13 SIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--------SN 84 (352)
T ss_dssp HHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--------CC
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--------hh
Confidence 33444455 444555544 55788888889999999999999999999999999999888885544431 12
Q ss_pred hhHHHHHHHHHHHHHh-cccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHH
Q 009536 420 HNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSL 498 (532)
Q Consensus 420 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (532)
.+ ......+..+.+ ....+....++.|.+|+++|++++++.+...++|..++|.+.+.+.+..||+..|++.+++.+
T Consensus 85 ~~--~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~ 162 (352)
T PF07690_consen 85 FW--LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSL 162 (352)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHH
T ss_pred HH--HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhh
Confidence 22 233333333333 334577788899999999999999999999999999999999999988899999999998888
Q ss_pred HHHHhhheeec
Q 009536 499 LSALFAYYFIV 509 (532)
Q Consensus 499 ~~~~~~~~~~~ 509 (532)
+..++...+.+
T Consensus 163 ~~~il~~~~~~ 173 (352)
T PF07690_consen 163 IAAILFILFLP 173 (352)
T ss_dssp HHHHHHHCCC-
T ss_pred hhhhhHhhhhh
Confidence 88765334443
No 174
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.27 E-value=1.2e-10 Score=114.09 Aligned_cols=154 Identities=16% Similarity=0.046 Sum_probs=113.1
Q ss_pred HHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHH
Q 009536 349 SSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILG 426 (532)
Q Consensus 349 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (532)
+|.+.++.+.+ ...+....+.++..++.++.|+++||+|||+++..+..+.+++.++.... ++...+..
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---------~~~~~l~~ 109 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT---------TSMTQFLI 109 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc---------CCHHHHHH
Confidence 34455566665 34666777788899999999999999999999999888888777766652 22222222
Q ss_pred HHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhh
Q 009536 427 TLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 427 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
.-+..+.+.+. .+....+..|.+|++++++++++.+....++..++|.+.+.+.+..||+..|++.+++.++..+..+
T Consensus 110 -~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 110 -ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222 3444567788999999999999999999999999999999999888999999988887777766555
Q ss_pred eeeccCC
Q 009536 506 YFIVETK 512 (532)
Q Consensus 506 ~~~~~~~ 512 (532)
+..||++
T Consensus 189 ~~lp~~~ 195 (413)
T PRK15403 189 LAMPETV 195 (413)
T ss_pred HhCCCCc
Confidence 5566653
No 175
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.27 E-value=1.2e-10 Score=113.75 Aligned_cols=158 Identities=14% Similarity=0.012 Sum_probs=113.3
Q ss_pred HHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhH
Q 009536 345 VLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNL 422 (532)
Q Consensus 345 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (532)
.....|.+.++.+.+ +.++......++..++.++.|+++||+|||+.+..+..+..++.+..... .+..
T Consensus 27 ~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---------~~~~ 97 (394)
T PRK11652 27 YVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA---------HSLT 97 (394)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH---------ccHH
Confidence 333456677777766 45777778889999999999999999999999998888877777666552 1122
Q ss_pred HHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHH
Q 009536 423 SILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (532)
.+ ....+..+.+.+. .+....+..|.++.++++.+.++.+....++..++|.+.+.+.+..||+..|.+.+++.++..
T Consensus 98 ~l-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 98 VL-IAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HH-HHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 22 2222222222222 344455667888888899999999999999999999999999998899999988777666555
Q ss_pred HhhheeeccCC
Q 009536 502 LFAYYFIVETK 512 (532)
Q Consensus 502 ~~~~~~~~~~~ 512 (532)
++..++.||++
T Consensus 177 ~~~~~~~~~~~ 187 (394)
T PRK11652 177 FSMARWMPETR 187 (394)
T ss_pred HHHHHhCCccC
Confidence 54445556543
No 176
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.27 E-value=1e-10 Score=114.70 Aligned_cols=174 Identities=14% Similarity=0.070 Sum_probs=121.6
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHH
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLV 406 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 406 (532)
+...+..+.............+.+.++.+.+. .++......++..++.++.|+++||+|||+.+..+..+.+++.+..
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 95 (406)
T PRK15402 16 LCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI 95 (406)
T ss_pred HHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 33333333333334444445566667777663 4666777888899999999999999999999998888877777766
Q ss_pred HHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009536 407 VGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 485 (532)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 485 (532)
... .+...+ ....+..+.+.+. .+.....+.|.+|++.|+++.++......++..++|.+.+.+.+..|
T Consensus 96 ~~~---------~~~~~l-~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 96 LLA---------QSIEQF-TLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHH---------ccHHHH-HHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 552 112222 2222222322222 35556777899999999999999988888999999999999999889
Q ss_pred cchhhHhHHHHHHHHHHhhheeeccCC
Q 009536 486 VAPVYAGFGGVSLLSALFAYYFIVETK 512 (532)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (532)
|+..|++.+++.++..+..+...|+++
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999998888877776665555556543
No 177
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.27 E-value=1.5e-10 Score=112.79 Aligned_cols=157 Identities=14% Similarity=0.099 Sum_probs=113.1
Q ss_pred hhHHHhHHHHH-HHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccch
Q 009536 343 NGVLYFSSLTF-QDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 419 (532)
Q Consensus 343 ~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (532)
.....+.+.++ ++.+.+ ..++......+...+..++.|+++||+|||+.+..+..+.+++.+.+... +
T Consensus 27 ~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~---------~ 97 (400)
T PRK11646 27 FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA---------H 97 (400)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh---------c
Confidence 33444555444 455655 44666667777888888999999999999999999999888888877652 2
Q ss_pred hhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHH
Q 009536 420 HNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSL 498 (532)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (532)
+.+.+.. ..+..+.+.+ ..+...+++.+.+|+++|+++.|+.+...++|..+||.+.+.+. ..||+..|++.+.+.+
T Consensus 98 ~~~~l~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~ 175 (400)
T PRK11646 98 EPWLLWL-SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFV 175 (400)
T ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 2222222 2222232222 34556677889999999999999999999999999999999998 6799999988777766
Q ss_pred HHHHhhheeecc
Q 009536 499 LSALFAYYFIVE 510 (532)
Q Consensus 499 ~~~~~~~~~~~~ 510 (532)
+..++..++.++
T Consensus 176 ~~~i~~~~~~~~ 187 (400)
T PRK11646 176 LAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHhCCc
Confidence 655544444454
No 178
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=1.5e-10 Score=116.31 Aligned_cols=160 Identities=16% Similarity=0.051 Sum_probs=116.7
Q ss_pred cccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhh--cH-H-HH
Q 009536 105 VMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SL-D-EM 180 (532)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~-~-~l 180 (532)
......|.+.+++|. +.....+......+...++.++.|+++||+|||++++.+.++.+++.++++... +. . ..
T Consensus 289 ~~~~~~p~i~~~~g~--~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 289 VVLYYAPEIFKTLGA--STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHHHHHHcCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 334456788888888 555556777778888899999999999999999999999999998888776432 21 1 22
Q ss_pred HHHHHHHhhhhhh-hhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcC------CCCCCcchhHHHHHhhHHH
Q 009536 181 LWGRFLVGLGIGV-NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI------PAEDDPHWWRTMLYIASLP 253 (532)
Q Consensus 181 ~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~------~l~~~~~~wr~~f~~~~~~ 253 (532)
..+-++.+++.+. ..+....++.|.+|+++|++++++......+|.++++.+.+ ++.+..+ |++.|++.+++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 445 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHH
Confidence 2334444444443 33677889999999999999999999988888888754443 4445566 88889888877
Q ss_pred HHHHHHHhcc-cccC
Q 009536 254 GFILALGMQF-TVES 267 (532)
Q Consensus 254 ~~~~~~~~~~-~~~~ 267 (532)
+++..+..++ .||+
T Consensus 446 ~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 446 GVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHhccccC
Confidence 7766555544 4554
No 179
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.25 E-value=2.3e-10 Score=110.65 Aligned_cols=163 Identities=15% Similarity=0.100 Sum_probs=111.0
Q ss_pred hcchhhHHHhHHH-HHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCC
Q 009536 339 FAGINGVLYFSSL-TFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLD 415 (532)
Q Consensus 339 ~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (532)
+........+.|. +.++.+.+ +.++......++..++.++.|+++||+|||+.+..+.++..++.+++.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~----- 88 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV----- 88 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh-----
Confidence 3344555666664 55666766 447777888899999999999999999999999999998888887776621
Q ss_pred ccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh----------hC
Q 009536 416 EDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET----------FG 485 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~----------~g 485 (532)
.+...+.. ..+..+.+.+..+....++.|.+|+++|+.+.++.....++|..+++.+.+.+.+. .+
T Consensus 89 ---~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 89 ---QSYSVLLL-LRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred ---hhHHHHHH-HHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 02222222 22223333333444567788999999999999999988888888888888776653 36
Q ss_pred cchhh-HhHHHHHHHHHHhhheeecc
Q 009536 486 VAPVY-AGFGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 486 ~~~~~-~~~~~~~~~~~~~~~~~~~~ 510 (532)
|++.| ...+++..+..++.+.+.++
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhccc
Confidence 88888 43344444444433334333
No 180
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.24 E-value=5.9e-11 Score=117.85 Aligned_cols=173 Identities=13% Similarity=0.049 Sum_probs=115.8
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHH-hhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc--chhHHH-HHhhHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL--GCRRTF-QIDTIPL 164 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~--Grr~~l-~~~~~~~ 164 (532)
++...+..++...........+|.+.+ ++|. +..+.+++...+.++..++.++.|+++||+ |||+.. .....+.
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 333444444433333344456666554 4687 777889999999999999999999999999 555432 2223333
Q ss_pred HHHHHHHHh--hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHH-HHHHhcCCCCCCcc
Q 009536 165 ILGAIISAQ--AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGII-TSLFLGIPAEDDPH 241 (532)
Q Consensus 165 ~~~~~~~~~--a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~ 241 (532)
.++.++..+ ..+.+.++++.++.|.+..........+..|.+|+++||+++|+.+....+|.. ++|.+.+.+.+..+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 333 TIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 333333222 334555555556666544333333445678999999999999999888888765 57999999998888
Q ss_pred hhHHHHHhhHHHHHHHHHHhccc
Q 009536 242 WWRTMLYIASLPGFILALGMQFT 264 (532)
Q Consensus 242 ~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
|+..|++.+..+++.++....+
T Consensus 413 -~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 413 -WDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred -chHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888777765555443
No 181
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=8.5e-11 Score=114.79 Aligned_cols=139 Identities=13% Similarity=0.061 Sum_probs=120.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHh
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~ 201 (532)
+....|++.++..+...++.+..|++.||+|+|+.+.++.++.+++..+...++|.+.+++.++++|++..........+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888998889999999999999999999999999999999988887888999999999999999987776777778
Q ss_pred hhhcCCcccccchhhH-hHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009536 202 ISEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (532)
Q Consensus 202 i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (532)
+.+..+++.++...+. ++....+|..++++++|++.+..| |+..|.+.+++.++..+..
T Consensus 332 ~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 332 ITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 8888888888877766 678899999999999999999888 9999999888877665443
No 182
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.24 E-value=5.9e-11 Score=116.99 Aligned_cols=177 Identities=19% Similarity=0.184 Sum_probs=159.7
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccc--hhHHHHHhhHHH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG--CRRTFQIDTIPL 164 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~ 164 (532)
+.++.+.++..+..+........+|.+.++.+. +..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~--~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGL--SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 346677777777778888888889999999998 8999999999999999999999999999988 667778888888
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009536 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (532)
Q Consensus 165 ~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr 244 (532)
+++.+.++++++++.++..-.+.|++.|........++.|....++-..+.|+.....+++.++||++++.+.+..+.|.
T Consensus 376 gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 376 GLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999998887799
Q ss_pred HHHHhhHHHHHHHHHHhcccc
Q 009536 245 TMLYIASLPGFILALGMQFTV 265 (532)
Q Consensus 245 ~~f~~~~~~~~~~~~~~~~~~ 265 (532)
..|+..++..++..+.++..+
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999999998888877776665
No 183
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.1e-11 Score=115.10 Aligned_cols=183 Identities=11% Similarity=0.079 Sum_probs=135.9
Q ss_pred HHHHHHHHHhhhcchhhHHHhHHHHHHHcCC--ChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHH
Q 009536 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGI--TDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLL 405 (532)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 405 (532)
....++....+..--+.+....+..-+.++. +..++....+.+...+.+++.|++.||+.|++++.+|..+..++.++
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~ 114 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFA 114 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHH
Confidence 3333444444444444444444443333344 35588888999999999999999999999999999999999888888
Q ss_pred HHHHhcCCCCccchhhHHHHHHHHHHHHHh-cccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009536 406 VVGATSLPLDEDFSHNLSILGTLFYIFTFA-IGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF 484 (532)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 484 (532)
..+. . ..+.+.++=...+.+ ....|+..++++|.+|.++|++++++.+....+|..+|-.+.+.+.+..
T Consensus 115 ~~fs---------~-~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 115 SGFS---------N-HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHH---------H-HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 8772 2 233333333333333 3346888999999999999999999999999999999988888887777
Q ss_pred C-cchhhHhHHHHHHHHHHhhheeeccCCCCCHHHHH
Q 009536 485 G-VAPVYAGFGGVSLLSALFAYYFIVETKGRSLEEIE 520 (532)
Q Consensus 485 g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (532)
+ |++.|.+.+++.++.+++..++.+|.+++..++.+
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~ 221 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVD 221 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCcccccccccc
Confidence 7 99999999999999999888888877665444443
No 184
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.23 E-value=1.5e-10 Score=113.56 Aligned_cols=180 Identities=16% Similarity=0.096 Sum_probs=148.0
Q ss_pred HHHHHHHHHHhhhhhhccc-cccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchh--HHHHHhhH
Q 009536 86 FPHVLIASMSNFLFGYHIG-VMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTI 162 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr--~~l~~~~~ 162 (532)
.+.+....++.++..-..+ ++........+++|+ +..+...+.-+..+..++|++++|++.||+|.| +++.++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~--s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGM--STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 3445555555554433333 333344455669999 888888888888999999999999999999999 89999988
Q ss_pred HHHHHHHHHHh--------hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcC
Q 009536 163 PLILGAIISAQ--------AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI 234 (532)
Q Consensus 163 ~~~~~~~~~~~--------a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 234 (532)
++.+..+...+ .++-+.+.+.-++.|++.|..++...++.++..|+++.+..+|++....-....+||++.+
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88666666555 5788889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhHHHHHhhHHHHHHHHHHhcccccC
Q 009536 235 PAEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (532)
Q Consensus 235 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (532)
.+.+..+.-|+.+....++.++.+++.++++.+
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 998887768999988888888877777666543
No 185
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.23 E-value=1.7e-10 Score=113.93 Aligned_cols=146 Identities=19% Similarity=0.167 Sum_probs=110.3
Q ss_pred cchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCcc
Q 009536 340 AGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDED 417 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (532)
.......+..+.+.++.+.+ +.++......++..++.++.|++.||+|||+.+..+..+.+++.++..+.
T Consensus 32 ~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------- 103 (426)
T PRK12307 32 FDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA-------- 103 (426)
T ss_pred hHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--------
Confidence 33444555666666777766 44677778889999999999999999999999999999888888776662
Q ss_pred chhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHH
Q 009536 418 FSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGG 495 (532)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~ 495 (532)
.+. ..+.+.-+..+.+.+ ..+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..||+..|++...
T Consensus 104 -~~~-~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 104 -SGV-IMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred -hHH-HHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 222 222223333333333 3456667888999999999999999999999999999999988888899998876443
No 186
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.22 E-value=1.4e-10 Score=112.55 Aligned_cols=156 Identities=17% Similarity=0.211 Sum_probs=118.1
Q ss_pred HHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHH
Q 009536 346 LYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLS 423 (532)
Q Consensus 346 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (532)
....|.+.++.+.+ +.++......++..++.++.|++.||+|||+.+..+..+.+++..++... .+...
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~---------~~~~~ 81 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA---------QTIDQ 81 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH---------ccHHH
Confidence 34556666777665 45777788889999999999999999999999999988888887777652 11222
Q ss_pred HHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHH
Q 009536 424 ILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSAL 502 (532)
Q Consensus 424 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (532)
+. ...+..+++.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..|.+.+.+.++..+
T Consensus 82 ~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 82 LI-YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 22 22222233322 34556678889999999999999999999999999999999999999999999888877777666
Q ss_pred hhheeeccC
Q 009536 503 FAYYFIVET 511 (532)
Q Consensus 503 ~~~~~~~~~ 511 (532)
+..+..+++
T Consensus 161 ~~~~~~~~~ 169 (377)
T PRK11102 161 LVFFFIPET 169 (377)
T ss_pred HHHHhCCcc
Confidence 555555554
No 187
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.21 E-value=1.8e-10 Score=113.85 Aligned_cols=159 Identities=16% Similarity=0.130 Sum_probs=110.3
Q ss_pred HHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHH
Q 009536 346 LYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLS 423 (532)
Q Consensus 346 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (532)
....|.+. +.+.+ +.++......++..++.++.|+++||+|||+.+..+.++.+++.+++...... .....
T Consensus 47 ~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 119 (438)
T TIGR00712 47 ALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA------TSSIA 119 (438)
T ss_pred HhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc------cchHH
Confidence 34445443 34554 55777888889999999999999999999999888887777776665442110 11122
Q ss_pred HHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH-hhCcchhhHhHHHHHHHHH
Q 009536 424 ILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE-TFGVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 424 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~-~~g~~~~~~~~~~~~~~~~ 501 (532)
......+..+.+.+ ..+.....+.|.+|+++|++++|+.+...++++.+++.+.+...+ ..||+..|++.+++.++..
T Consensus 120 ~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 120 IMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVA 199 (438)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 22222222233222 234455677789999999999999999999999999988876554 4689999998888877766
Q ss_pred HhhheeeccC
Q 009536 502 LFAYYFIVET 511 (532)
Q Consensus 502 ~~~~~~~~~~ 511 (532)
++.+++.+|.
T Consensus 200 ~~~~~~~~~~ 209 (438)
T TIGR00712 200 LFAFAMMRDT 209 (438)
T ss_pred HHHHHhccCC
Confidence 6555555553
No 188
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.20 E-value=7.9e-10 Score=110.46 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=122.0
Q ss_pred hHHHHHhhCCCCChhHHHHHHH-HHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH---Hhh-hcHHHHHHHH
Q 009536 110 IVSIAKELGFEGNPILEGLVVS-IFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS---AQA-HSLDEMLWGR 184 (532)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~s-~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-~~~~~l~~~r 184 (532)
.|.+.+++|. +..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.++..++. +.. ++.+.+.+.-
T Consensus 246 ~~~l~~~~G~--s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 246 TTFLIRGVGF--DAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 3455677888 8899999875 5568999999999999999999998887766655544332 233 4555555566
Q ss_pred HHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009536 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (532)
Q Consensus 185 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
+++.++.|...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+..| |+..|.+.++++++.++...++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 776666666667778888999999999999999999999999988889999988887 9999999888888877766666
Q ss_pred ccC
Q 009536 265 VES 267 (532)
Q Consensus 265 ~~~ 267 (532)
+++
T Consensus 403 ~~~ 405 (491)
T PRK11010 403 RQT 405 (491)
T ss_pred Hhc
Confidence 543
No 189
>PRK11043 putative transporter; Provisional
Probab=99.20 E-value=5.8e-10 Score=109.17 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=109.6
Q ss_pred hHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHH
Q 009536 348 FSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSIL 425 (532)
Q Consensus 348 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
..+.+.++.+.+ +.++......++..++.++.|+++||+|||+.+..+..+..++.++..+. .+...+.
T Consensus 28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------~~~~~l~ 98 (401)
T PRK11043 28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV---------ESAAQLL 98 (401)
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh---------cCHHHHH
Confidence 334455666665 44777778889999999999999999999999998888777777666552 1222222
Q ss_pred HHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhh
Q 009536 426 GTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 426 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 504 (532)
...+..+.+.+. .+.....+.|.+|+++++...+..+....++..++|.+.+.+.+..||+..|++.+++.++..++.
T Consensus 99 -~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 99 -VLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPT 177 (401)
T ss_pred -HHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 222222222222 233456678889998899999999988999999999999999999999999988877777666555
Q ss_pred heeec
Q 009536 505 YYFIV 509 (532)
Q Consensus 505 ~~~~~ 509 (532)
+...+
T Consensus 178 ~~~~~ 182 (401)
T PRK11043 178 LRLKP 182 (401)
T ss_pred HHcCC
Confidence 44433
No 190
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.20 E-value=1.7e-10 Score=116.11 Aligned_cols=162 Identities=18% Similarity=0.089 Sum_probs=108.1
Q ss_pred cchhHHHHHhhCCCCChhH---------HHH-HHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhc
Q 009536 107 NGPIVSIAKELGFEGNPIL---------EGL-VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS 176 (532)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~---------~~~-~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~ 176 (532)
....|.+.++.|.+.+... ... ...+..++..++.++.++++||+|||++++++..+.+++.++.++..+
T Consensus 308 ~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~ 387 (502)
T TIGR00887 308 NLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYN 387 (502)
T ss_pred ccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3346777778887322110 011 233344566678889999999999999999988887777666654321
Q ss_pred ----HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc---------chh
Q 009536 177 ----LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------HWW 243 (532)
Q Consensus 177 ----~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------~~w 243 (532)
...+...-+...++.....+....+..|.+|.+.|+++.++.+....+|.++++.+.+.+.+.. .++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 467 (502)
T TIGR00887 388 HLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWM 467 (502)
T ss_pred hcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccc
Confidence 1111111111222222344566677899999999999999999999999999999998887632 114
Q ss_pred HHHHHhhHHHHHHHHHHhcccccCh
Q 009536 244 RTMLYIASLPGFILALGMQFTVESP 268 (532)
Q Consensus 244 r~~f~~~~~~~~~~~~~~~~~~~~p 268 (532)
...|++.++.+++..+..+++||+.
T Consensus 468 ~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 468 GHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred hHHHHHHHHHHHHHHHHheEeccCC
Confidence 5677777777776666666778764
No 191
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.19 E-value=1.1e-10 Score=113.63 Aligned_cols=149 Identities=14% Similarity=-0.010 Sum_probs=115.6
Q ss_pred hhHHHHHhhCCCCChhHHHHHHHHHH-HHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHh------hhcHHHHH
Q 009536 109 PIVSIAKELGFEGNPILEGLVVSIFI-AGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ------AHSLDEML 181 (532)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~~~-l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~------a~~~~~l~ 181 (532)
..+.+.+|.|. +..+.|++..... ....++.++.|++.||+|+|+.+..+..+.++..+.... .++...++
T Consensus 230 ~~~~~l~~~G~--s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGW--PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 44556667888 8999999988876 466678899999999999999998887766443332221 23344455
Q ss_pred HHHHHHhhhhhhhhhhhhHhhhhcCCc-ccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009536 182 WGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (532)
Q Consensus 182 ~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (532)
....+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..+ |+..|++.+++.++..+.
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHH
Confidence 566677777788888888887777776 788999999999999999999999999998887 999999887777665443
No 192
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.19 E-value=9.7e-10 Score=109.28 Aligned_cols=153 Identities=10% Similarity=0.106 Sum_probs=107.5
Q ss_pred cchhhHHHhHHHHHH-HcCCCh--hHHHHHHHHHHHHHHhhhhHhhhhh-cCCchhhhhhHHHHHHHHHHHHHHhcCCCC
Q 009536 340 AGINGVLYFSSLTFQ-DVGITD--GALASLLVGVTNFAGALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATSLPLD 415 (532)
Q Consensus 340 ~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (532)
..++....+++.|++ +.+.++ +.+....+.....+..+++|+++|| +|||+++..+.++..++.+.+.+..
T Consensus 28 ~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~----- 102 (489)
T PRK10207 28 FGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL----- 102 (489)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 344444445555544 456553 3455555566666677799999999 9999999999999999888877621
Q ss_pred ccchhhHHHHHHHHHHHHHhcc-cccccccccccccCcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHh
Q 009536 416 EDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNR--TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAG 492 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~ 492 (532)
.....+.......+.+.+ ..|...+++.|.+|++ +|+.++++.+...++|..++|.+.|++.++.||++.|++
T Consensus 103 ----~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i 178 (489)
T PRK10207 103 ----LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNL 178 (489)
T ss_pred ----cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHH
Confidence 111112122223334433 3466678899999877 457899999999999999999999999999999999988
Q ss_pred HHHHHHHHH
Q 009536 493 FGGVSLLSA 501 (532)
Q Consensus 493 ~~~~~~~~~ 501 (532)
.++..+++.
T Consensus 179 ~~i~~~~~~ 187 (489)
T PRK10207 179 CGAGLIIAL 187 (489)
T ss_pred HHHHHHHHH
Confidence 655444333
No 193
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.17 E-value=1.1e-09 Score=96.52 Aligned_cols=176 Identities=15% Similarity=0.081 Sum_probs=131.5
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 165 (532)
|..+..........+ ....++..-|++++.+|+ |..|...+...-.+|..+ +++.|.+.|++|++.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~--sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGY--SQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCC--CHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHH
Confidence 444444444443333 445566677899999999 999999999999999886 5889999999999999999999999
Q ss_pred HHHHHHHhh-------hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 166 LGAIISAQA-------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 166 ~~~~~~~~a-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
+|..+..++ .++|.+.+..++.|.+.+....++.....+.||. +||++.|+.-...+++..+-..+...+..
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 998887653 4678888888999998877777777777788985 69999999999999987776666555544
Q ss_pred CcchhHHHHHhhHHHHHHHHHHhcccccC
Q 009536 239 DPHWWRTMLYIASLPGFILALGMQFTVES 267 (532)
Q Consensus 239 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (532)
... -+..+.......++.++...+++..
T Consensus 157 ~~~-~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 157 DDP-SSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred CCh-HHHHHHHHHHHHHHHHHHhhheecc
Confidence 433 4555555555555555555555443
No 194
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.17 E-value=8.9e-11 Score=96.15 Aligned_cols=134 Identities=14% Similarity=0.113 Sum_probs=100.3
Q ss_pred HHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-cccccccc
Q 009536 367 LVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-AGPVTGLV 445 (532)
Q Consensus 367 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 445 (532)
...++.+++.++.+++.||++||+.+..+.....++.+.+... .+... .....+..+.+.+ ..+....+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS---------SNITV-LIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh---------ccHHH-HHHHHHHHHHHHHHHHHhHHHH
Confidence 3467788899999999999999999988887777776665542 11222 2222222233222 34566778
Q ss_pred cccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeecc
Q 009536 446 IPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 446 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (532)
..|.+|+++|+++.++.+....++..+++.+.+.+.+..+++..+.+.+.+.++..+..++..||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 88999999999999999999999999999999999998888888888887777776666555443
No 195
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.15 E-value=1.5e-09 Score=108.48 Aligned_cols=154 Identities=13% Similarity=0.105 Sum_probs=102.6
Q ss_pred hcchhhHHHhHHHHH-HHcCCChh--HHHHHHHHHHHHHHhhhhHhhhhh-cCCchhhhhhHHHHHHHHHHHHHHhcCCC
Q 009536 339 FAGINGVLYFSSLTF-QDVGITDG--ALASLLVGVTNFAGALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATSLPL 414 (532)
Q Consensus 339 ~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (532)
...++....+++.++ ++.+.+.. ...............+++|++.|| +|||+.+..+..+..++..++.+..
T Consensus 34 ~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~---- 109 (500)
T PRK09584 34 RFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG---- 109 (500)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc----
Confidence 334445555666665 45666543 344434444444445689999999 5999999999988888877666521
Q ss_pred CccchhhHHHHHHHHHHHHHhcc-cccccccccccccCccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhH
Q 009536 415 DEDFSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRT--RGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYA 491 (532)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~ 491 (532)
.....+.......+.+.+ ..+....+..|.+|++. ++.+.++.+...++|..++|.+.|++.+..||+..|.
T Consensus 110 -----~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~ 184 (500)
T PRK09584 110 -----HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFA 184 (500)
T ss_pred -----ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 111222222222333333 34556678889887643 4567888899999999999999999999999999998
Q ss_pred hHHHHHHHHH
Q 009536 492 GFGGVSLLSA 501 (532)
Q Consensus 492 ~~~~~~~~~~ 501 (532)
+.++..+++.
T Consensus 185 i~~i~~~i~~ 194 (500)
T PRK09584 185 LSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHH
Confidence 8775544443
No 196
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.14 E-value=6.1e-10 Score=103.97 Aligned_cols=162 Identities=14% Similarity=0.108 Sum_probs=122.4
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHh---hCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKE---LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
++.+.+..++.|.............+.+.+| +|. ++.+.++..+.+..+..++.++.+++.||+|+|+++.++..
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~--s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~ 216 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGL--PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAF 216 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3344445555555554444444445554443 577 88999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcch
Q 009536 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (532)
Q Consensus 163 ~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 242 (532)
+.+++.++....++...+ .+-++.|++.+..+|...+...+..+++ .+.+.++. ....+|..++|.+.|.+.+..+
T Consensus 217 l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g- 292 (310)
T TIGR01272 217 LAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG- 292 (310)
T ss_pred HHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-
Confidence 888887766665554333 4556889999999999999998988765 55666765 5566899999999999988777
Q ss_pred hHHHHHhhHHH
Q 009536 243 WRTMLYIASLP 253 (532)
Q Consensus 243 wr~~f~~~~~~ 253 (532)
.+..|++..+.
T Consensus 293 ~~~a~~v~~~~ 303 (310)
T TIGR01272 293 IQLAFALPVPC 303 (310)
T ss_pred chHHHHHHHHH
Confidence 88888754443
No 197
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.14 E-value=2.9e-09 Score=103.07 Aligned_cols=180 Identities=12% Similarity=-0.016 Sum_probs=111.7
Q ss_pred HHHHHHHHHHhhhcchhhHHHhHHHHHH-HcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHH
Q 009536 327 AFIGGALFLLQQFAGINGVLYFSSLTFQ-DVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISM 403 (532)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 403 (532)
.+....+.+...+.....+....+.+-+ +.+.+ +.++...+..+...++++..|++.||+|.|+++.++.++..+..
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~ 114 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPC 114 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 3444344444444444444444444433 56666 45677777788888999999999999999999998888888777
Q ss_pred HHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH--
Q 009536 404 LLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV-- 481 (532)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~-- 481 (532)
+.+.+..... .++. ..+.++-+..+.+.+..+.....+++.+|+++||++.|+.....++|..+++.+.+.+.
T Consensus 115 ~~~~~a~~~~----~~s~-~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 115 VWLGIAVQNP----NTPF-GIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHccc----CCCH-HHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 7666521100 0122 22222323333333345556677889999999999999997777777776665554433
Q ss_pred ---Hhh-------------CcchhhHhHHHHHHHHHHhhheeeccC
Q 009536 482 ---ETF-------------GVAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 482 ---~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
+.. +++.+.++...+.++..++.+++.++.
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 322 245555566666666666665555543
No 198
>PRK15075 citrate-proton symporter; Provisional
Probab=99.14 E-value=7.9e-10 Score=109.24 Aligned_cols=138 Identities=18% Similarity=0.078 Sum_probs=100.2
Q ss_pred ccccccchhHHHHH-hhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHH-H---Hhhhc
Q 009536 102 HIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII-S---AQAHS 176 (532)
Q Consensus 102 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~-~---~~a~~ 176 (532)
.........|.+.+ .+|. +..+.++....+.++..++.+++|+++||+|||++++.+.++..+.... . ...++
T Consensus 253 ~~~~~~~~~p~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHL--SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPS 330 (434)
T ss_pred HHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 33344455666554 4788 7778888888999999999999999999999999988775554332221 1 12244
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhH-HHHHHHHHHHHHhcCCCCCCcc
Q 009536 177 LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH 241 (532)
Q Consensus 177 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~ 241 (532)
+..+.+..++.|++.+...+....++.|.+|+++|+...++.. .+..++..++|.+.+++.+..+
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 331 FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 5445555666677777777777788999999999999999864 4445557778999888887766
No 199
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.13 E-value=1.7e-10 Score=114.36 Aligned_cols=118 Identities=23% Similarity=0.200 Sum_probs=100.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh-hcHHHHHHHHHHHhhhhhhhhhhhhH
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVNTVLVPI 200 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~g~~~~~~~~ 200 (532)
+..+.+++.+.+.++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567788888899999999999999999999999999999888888777665 46677788889999999999999999
Q ss_pred hhhhcCC-------cccccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 201 YISEVAP-------TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 201 ~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
+++|..+ ++++|.+.++.+....+|..+++.+.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 45579999999999999999999988877654
No 200
>TIGR00898 2A0119 cation transport protein.
Probab=99.12 E-value=1.8e-10 Score=116.38 Aligned_cols=137 Identities=18% Similarity=0.071 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcH--HHHHHHHHHHhhhhhhhhhhhhHhhhhcC
Q 009536 129 VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL--DEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (532)
Q Consensus 129 ~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 206 (532)
...+..+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3445566677888999999999999999999999999988888776543 45556667777777888888899999999
Q ss_pred CcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccCh
Q 009536 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (532)
Q Consensus 207 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (532)
|++.|+.++|+.+....+|.+++|.+.+ +. ..+ +...+++.+...++..+..+++||+.
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKW-LFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHH-HhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999999999999999999988 43 333 67788888888877777777888763
No 201
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.12 E-value=4.6e-10 Score=103.56 Aligned_cols=176 Identities=16% Similarity=0.094 Sum_probs=145.6
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
.+++.-..+.++.+.. +......-..++|+ +..+..++...-.+..+++++++|+|.||+|.|+++.+++++..+.+
T Consensus 256 ~FLiA~~~~~DGv~ti-l~~~~~fg~~~~gl--s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 256 LFLIARFFYIDGVNTI-LAMGGVFGAADLGL--SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 4444444444444332 22222334459999 99999999999999999999999999999999999999999999988
Q ss_pred HHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 009536 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (532)
Q Consensus 169 ~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~ 248 (532)
+..-+...-..+.++-.+.|++.|..+....++..+.+|+++-++.+|+++...-.+..+||.+.+.+.+..+.-|.-+.
T Consensus 333 ~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 333 LYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred HHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 88888777777888889999999999999999999999999999999999999999999999999999887776888887
Q ss_pred hhHHHHHHHHHHhcccccC
Q 009536 249 IASLPGFILALGMQFTVES 267 (532)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~ 267 (532)
...++.++.++..+..|++
T Consensus 413 ~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 413 SIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHhhHhhEEeecCC
Confidence 7777777777777776654
No 202
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.12 E-value=3e-10 Score=109.18 Aligned_cols=137 Identities=15% Similarity=0.080 Sum_probs=108.8
Q ss_pred cccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-chhHHHHHhhHHHHHHHHHHHhhhcHHHHHHH
Q 009536 105 VMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (532)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 183 (532)
.....+|.+.++.|. +..+.+++.+.+.++..+++++.|++.||+ +||+.+..+.++.+++.+++.+.++..... .
T Consensus 215 ~~~~~lp~~~~~~g~--~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (355)
T TIGR00896 215 SLIGWLPAILISHGA--SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-H
Confidence 344556777778887 888899999999999999999999999999 567777788888888877777665433322 4
Q ss_pred HHHHhhhhhhhhhhhhHhhhhcCC-cccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhH
Q 009536 184 RFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (532)
Q Consensus 184 r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr 244 (532)
-++.|++.+...+.....+.+..+ +++++...++.+....+|..++|.+.|.+.++.++|.
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 577899999998888777766554 5667888999888888999999999999988766454
No 203
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.11 E-value=1.5e-09 Score=100.12 Aligned_cols=166 Identities=17% Similarity=0.064 Sum_probs=125.6
Q ss_pred hhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCC
Q 009536 337 QQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 414 (532)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (532)
..+.....+....+.+-++.+.+ +.++...+..+.+.+.++..|.+.||+|.|++...+.++..+-++.+.+....+
T Consensus 25 v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~- 103 (417)
T COG2223 25 VGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP- 103 (417)
T ss_pred HHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC-
Confidence 33333344444444444666766 457777788899999999999999999999999999998888888877754422
Q ss_pred CccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC---cchhhH
Q 009536 415 DEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG---VAPVYA 491 (532)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g---~~~~~~ 491 (532)
+ . +.+..+-+..+.+.+...+...++++.+|++++|.++|+.. .+|+|..+...+.+.+....| |+.+..
T Consensus 104 ----~-~-~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~ 176 (417)
T COG2223 104 ----S-T-WQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAG 176 (417)
T ss_pred ----c-h-HHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 1 1 23333444445555556667788999999999999999998 999999999999999999999 888888
Q ss_pred hHHHHHHHHHHhhheeecc
Q 009536 492 GFGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~ 510 (532)
+.....++..++.++..++
T Consensus 177 i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 177 IYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 8888888877777766543
No 204
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.11 E-value=7.1e-10 Score=102.86 Aligned_cols=147 Identities=11% Similarity=0.125 Sum_probs=106.8
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc----cchhHHHHH-hhHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRRTFQI-DTIP 163 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr----~Grr~~l~~-~~~~ 163 (532)
++.++...+..-++...-...++++.+++|+ +....+.+--.-.+...+.+++.|..+|| |||||.++. +.++
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGv--phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGV--PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCC--CcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 4444444444455555555566778888898 66666777777777888899999999995 788766555 5556
Q ss_pred HHHHHHHHHhhhcHHH-----------------HHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccc-hhhHhHHHHHHH
Q 009536 164 LILGAIISAQAHSLDE-----------------MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGS-LGTLCQVGTCLG 225 (532)
Q Consensus 164 ~~~~~~~~~~a~~~~~-----------------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g 225 (532)
.+++.++.+++.++.. ++++-.+.=++.-.....+-+++.|...++++.+ +++.+....++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 6777777777654433 3334444445555777888899999998777777 999999999999
Q ss_pred HHHHHHhcCCCC
Q 009536 226 IITSLFLGIPAE 237 (532)
Q Consensus 226 ~~~g~~~~~~l~ 237 (532)
.++|..++.++.
T Consensus 192 nvLGY~~g~y~~ 203 (498)
T KOG0637|consen 192 NVLGYALGSYLG 203 (498)
T ss_pred ceeeeecccccC
Confidence 999999987554
No 205
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.11 E-value=6.9e-10 Score=104.90 Aligned_cols=156 Identities=15% Similarity=0.086 Sum_probs=111.0
Q ss_pred chhhHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccc
Q 009536 341 GINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDF 418 (532)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (532)
+...+.+++-.++++.+.... |......-.+.++.-++.+++.+|+|+-+++..++.+..+=++.+....
T Consensus 386 g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~-------- 457 (618)
T KOG3762|consen 386 GVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ-------- 457 (618)
T ss_pred HHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--------
Confidence 344445555556677654432 5555555677788888999999999999999999998888888777732
Q ss_pred hhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHH-HHHHHHHHHHHHHHHHhhCcchhhHhHHHHH
Q 009536 419 SHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVH-WVCNFLVGLFFLDLVETFGVAPVYAGFGGVS 497 (532)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (532)
+.|..+..=++-....+. .+....+|+.+..||+.+.++.++..... .+|-.+|+.++|.+.+.+|-+..|..+++.+
T Consensus 458 n~W~vLPieilqgit~al-iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAc 536 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHAL-IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIAC 536 (618)
T ss_pred CchheeeHHHHHHHHHHH-HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHH
Confidence 222222222222222222 34445688899999999999999987765 5888999999999999999899998888777
Q ss_pred HHHHHhhh
Q 009536 498 LLSALFAY 505 (532)
Q Consensus 498 ~~~~~~~~ 505 (532)
++.+++..
T Consensus 537 l~~l~~~~ 544 (618)
T KOG3762|consen 537 LVTLALFI 544 (618)
T ss_pred HHHHHHHH
Confidence 77665543
No 206
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.10 E-value=5.5e-10 Score=111.56 Aligned_cols=142 Identities=16% Similarity=0.063 Sum_probs=107.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhc-cc
Q 009536 360 DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GA 438 (532)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 438 (532)
+.+.....+.++..++.++.|++.||+|+|+.+..+.++..++.++..+... ..... ..+.-+..+.+. ..
T Consensus 77 ~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-------~~~~~-l~~~r~~~G~~~~~~ 148 (465)
T TIGR00894 77 LQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-------GGIAL-VVFCRVIQGLAQGSV 148 (465)
T ss_pred HhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-------cCchH-HHHHHHHHHHhcccc
Confidence 3467777888999999999999999999999999888877777666543210 11122 222223333333 33
Q ss_pred ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh-CcchhhHhHHHHHHHHHHhhheeec
Q 009536 439 GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF-GVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
.+....++.|.+|+++|+++.|+.+....+|..+++.+.+.+.+.. ||+..|++.+++.++..++.+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 5677788999999999999999999999999999999999999984 9999999888877666655544443
No 207
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.10 E-value=1.6e-09 Score=105.35 Aligned_cols=148 Identities=15% Similarity=0.071 Sum_probs=104.8
Q ss_pred HHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHH
Q 009536 349 SSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILG 426 (532)
Q Consensus 349 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (532)
.+...++.+.+ ..++....+.+...+..++.|++.||+|||+++..+..+.+++.+++... ... +.
T Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~---------~~~--~~- 93 (393)
T PRK11195 26 AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG---------IHP--LL- 93 (393)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH---------HHH--HH-
Confidence 33445566554 34677778889999999999999999999999999998887776665441 111 11
Q ss_pred HHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhhe
Q 009536 427 TLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYY 506 (532)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 506 (532)
..++.+.......|...+++.|.+|+++|++++|+.+....++..+||.+.|.+.+.. +...+.+.+.+.+++.+ ..+
T Consensus 94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~-~~~ 171 (393)
T PRK11195 94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAAL-FNL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHh
Confidence 1222222233345788889999999999999999999999999999999999998864 55555555444433333 334
Q ss_pred eecc
Q 009536 507 FIVE 510 (532)
Q Consensus 507 ~~~~ 510 (532)
..|+
T Consensus 172 ~l~~ 175 (393)
T PRK11195 172 FIPR 175 (393)
T ss_pred cCCC
Confidence 4554
No 208
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=1.8e-09 Score=106.61 Aligned_cols=157 Identities=11% Similarity=-0.007 Sum_probs=100.8
Q ss_pred cchhHHH-HHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHH--h--hhcHHHHH
Q 009536 107 NGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA--Q--AHSLDEML 181 (532)
Q Consensus 107 ~~~~~~~-~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--a~~~~~l~ 181 (532)
...+|.+ .+++|. +..+.++..++..+...+++++.|+++||+|||+++.++.++.++...... . .++....+
T Consensus 263 ~~~lp~~l~~~~g~--s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 263 TTYMQKYLVNTAGM--HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 3445554 456787 777888888888888889999999999999999988877665443332221 1 22333222
Q ss_pred HHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHH-HHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009536 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL-GIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (532)
Q Consensus 182 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (532)
..-++.+++.+...+....++.|++|++.|+.++|+.+....+ .....|.+.+.+. ..++|...++..++..++..+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHH
Confidence 2223333333444455667889999999999999998765443 3444777766553 3343666666666666665555
Q ss_pred hccccc
Q 009536 261 MQFTVE 266 (532)
Q Consensus 261 ~~~~~~ 266 (532)
.+++.+
T Consensus 420 ~~~l~~ 425 (432)
T PRK10406 420 SLMLHR 425 (432)
T ss_pred HHHhhh
Confidence 554443
No 209
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.07 E-value=6.6e-08 Score=92.44 Aligned_cols=313 Identities=12% Similarity=0.026 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcc
Q 009536 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK 209 (532)
Q Consensus 130 ~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 209 (532)
.++-+..+.+++++.+.+.|+.|+|+.++++..+.....+.+-+-+ -+-++.+-.+.|+|.+..+...-.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 6677778889999999999999999999999999998888777655 456788899999999999999999999999999
Q ss_pred cccchhhHhHHHHHHHHHHHHHhcCCCCCCcc-------hh-HH-------------HHHhhHHHHHHHHHHhcccccCh
Q 009536 210 YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-------WW-RT-------------MLYIASLPGFILALGMQFTVESP 268 (532)
Q Consensus 210 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-------~w-r~-------------~f~~~~~~~~~~~~~~~~~~~~p 268 (532)
.+.+..++.......+.++|..+-..+..... +- ++ .+.+...+..+.++...+.|.+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 99999999888888888888666544332111 01 11 11111111122222223333211
Q ss_pred hHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhh---hhhcCCcchHHHHHHHHHHHhhhcchhhH
Q 009536 269 RWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWS---ELLEEPHSRVAFIGGALFLLQQFAGINGV 345 (532)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (532)
....+ +..+.......+ +++++++............ +....+.
T Consensus 215 -~~~~~------------------------------~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG---~~~Sf~~ 260 (461)
T KOG3098|consen 215 -VVNCK------------------------------SSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTG---LETSFWI 260 (461)
T ss_pred -hhhhh------------------------------hhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHH---HHHHHHH
Confidence 00000 000011111222 2333333222221111111 1111111
Q ss_pred HHhHHHHHH--HcCCC---hhHHHHHHHHHHHHHHhhhhHhhhhh---cCCchhhhhhHHHHHHHHHHHHHHhcCCC--C
Q 009536 346 LYFSSLTFQ--DVGIT---DGALASLLVGVTNFAGALCASYLMDK---EGRQKLLIGSYLGMAISMLLVVGATSLPL--D 415 (532)
Q Consensus 346 ~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 415 (532)
..|...+.- ..+.. -.+......+++.+++....+.+.+| +|+++.+.++..+..+.+++......... .
T Consensus 261 ~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~ 340 (461)
T KOG3098|consen 261 SIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLR 340 (461)
T ss_pred hccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCC
Confidence 112211111 12222 22455556677888888888888766 67888887777776666665544321111 0
Q ss_pred cc------chhhHHHHHHHHHHHHHhcc-cccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHH
Q 009536 416 ED------FSHNLSILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFL 478 (532)
Q Consensus 416 ~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 478 (532)
++ ..+...+..++.+..+++-+ .....+.++.+.+ ++.|..+.++.-.-..++..++-....
T Consensus 341 ~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 341 PTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred CCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 10 01112222233333333322 3456677788888 456888888888877777776655554
No 210
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.04 E-value=2.6e-07 Score=88.66 Aligned_cols=376 Identities=11% Similarity=-0.007 Sum_probs=203.1
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
...++.+.++...+..+.....+.+..+..-+ +-.-.+...-.-.+..++.++..|.+.||..|.+++..+.+..-++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~-sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPG-SLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 55677888888888888888888877777431 22223334444455667888899999999999999888776654433
Q ss_pred HHHHhh--------h----cHHHH---HHHHHHHhhhhhhhh-hhhhHhhhhcC------CcccccchhhHhHHHHHHHH
Q 009536 169 IISAQA--------H----SLDEM---LWGRFLVGLGIGVNT-VLVPIYISEVA------PTKYRGSLGTLCQVGTCLGI 226 (532)
Q Consensus 169 ~~~~~a--------~----~~~~l---~~~r~l~G~~~g~~~-~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~ 226 (532)
.+++.. . +-+.. ++.-.+.|.-.-... ....++=.||. +++.+.+.++...-.--+--
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 333211 1 11222 222222222111111 11112223443 24445677777777788889
Q ss_pred HHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc-----ccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHH
Q 009536 227 ITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT-----VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQ 301 (532)
Q Consensus 227 ~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (532)
+++|++.|.+....+ .+...++.+...++..+.=+++ ...|. +..+++.++........ ............
T Consensus 163 llaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~-L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 238 (432)
T PF06963_consen 163 LLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFVEYFLLARVYNSVPA-LAVKKRSSESESSSDEE--SSSESSSDPSIL 238 (432)
T ss_pred HHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-hcCCCCCcccccccccc--ccccccchhhHH
Confidence 999999999988777 7777776666666554332221 12222 22111111111000000 000000000011
Q ss_pred HHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHHhhhh
Q 009536 302 LVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGALCA 379 (532)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 379 (532)
...++.-......|+..++.+.+...+...++++. ...+...+..|+...|.+.. +..-....+.++.+.++.
T Consensus 239 ~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-----VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~ 313 (432)
T PF06963_consen 239 KRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-----VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVY 313 (432)
T ss_pred HHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-----HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111223456677777655544443333332 11223344555666677654 556666778899999999
Q ss_pred HhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc---cccccccccccCccccc
Q 009536 380 SYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG---PVTGLVIPELSSNRTRG 456 (532)
Q Consensus 380 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 456 (532)
.++.+|+|..+.-.++.....++..+.......+..+ . .......++......=.|.+ -...-+++|..|+++||
T Consensus 314 p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~-~-~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg 391 (432)
T PF06963_consen 314 PWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP-F-SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERG 391 (432)
T ss_pred HHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC-c-hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhh
Confidence 9999999988877777665555444433322222111 0 11111111111111112222 33456778999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 009536 457 KIMGFSFSVHWVCNFLVGLF 476 (532)
Q Consensus 457 ~~~g~~~~~~~~g~~i~~~~ 476 (532)
+..|+-+...++...+.-.+
T Consensus 392 ~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 392 AVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877665433
No 211
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.04 E-value=1.3e-09 Score=107.84 Aligned_cols=151 Identities=16% Similarity=0.149 Sum_probs=106.2
Q ss_pred HhHHHHHHHcCCC-hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHH
Q 009536 347 YFSSLTFQDVGIT-DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSIL 425 (532)
Q Consensus 347 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
..++.+..+.|.+ ...+......++..++.++.|+++|.+|||..++.+.++..++.++.... +.....
T Consensus 65 ~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA----------~~~~~~ 134 (599)
T PF06609_consen 65 SILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA----------QNMNTF 134 (599)
T ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC----------CcHHHH
Confidence 3445666777665 44677777888899999999999999999999999999999998888762 222222
Q ss_pred HHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhh
Q 009536 426 GTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (532)
.......+.+.+........++|..|.+.|..+.++.....-....+++.+...+..+.+|++.|++.++...++.+..+
T Consensus 135 iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 135 IAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 22222333334444445566899999999988877666554444456677776666667899999988887766665544
Q ss_pred ee
Q 009536 506 YF 507 (532)
Q Consensus 506 ~~ 507 (532)
++
T Consensus 215 ~f 216 (599)
T PF06609_consen 215 FF 216 (599)
T ss_pred HH
Confidence 33
No 212
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.03 E-value=4.8e-10 Score=102.01 Aligned_cols=144 Identities=15% Similarity=0.073 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhc-cc
Q 009536 360 DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAI-GA 438 (532)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 438 (532)
+.++.+...++.+++.+++.|.+.||+|+|..+++|+.++..+.+++.+. +... .+.+.=..-+.+. ..
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg---------~sy~-~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG---------NSYP-MLFVARSLQGVGSAFA 176 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc---------chhH-HHHHHHHHhhhhHHHH
Confidence 56888889999999999999999999999999999999999999998882 2222 2222222223222 23
Q ss_pred ccccccccccccCccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCC
Q 009536 439 GPVTGLVIPELSSNRT-RGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKG 513 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (532)
.....+++++.+|.+. |++++|+.-.+..+|-.+||++.|.+++..|+..+|.++++++++...+.++.++.++.
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 4556678889998765 69999999999999999999999999999999999999999999988887776655443
No 213
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.03 E-value=2.7e-09 Score=102.63 Aligned_cols=173 Identities=16% Similarity=0.233 Sum_probs=134.0
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELG-FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 167 (532)
+....+..++.+.....+....+.+.+|.| . +....+.+.++..++=.+.-...+++..|+|.|+++.++.+.+++=
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~--~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGY--SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVR 286 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 334444455666666666677777778877 5 5566677777777777888889999999999999999999999999
Q ss_pred HHHHHhh-hcHHHHHH----HHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHH-HHHHHHHHHHHhcCCCCCCcc
Q 009536 168 AIISAQA-HSLDEMLW----GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQV-GTCLGIITSLFLGIPAEDDPH 241 (532)
Q Consensus 168 ~~~~~~a-~~~~~l~~----~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~ 241 (532)
..+.+.. ++.+...+ ...++|+..+..+.+...++.+..|++.|+++.+++.. ..++|..+|..++|++.+..+
T Consensus 287 ~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 287 WLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 8888887 55444333 34579999999999999999999999999999999875 578999999999999988755
Q ss_pred h-----hHHHHHhhHHHHHHHHHHhcc
Q 009536 242 W-----WRTMLYIASLPGFILALGMQF 263 (532)
Q Consensus 242 ~-----wr~~f~~~~~~~~~~~~~~~~ 263 (532)
. |...+.+.+.+.++..+++++
T Consensus 367 ~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 367 ARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 1 555666666665555444433
No 214
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.02 E-value=8e-10 Score=99.96 Aligned_cols=112 Identities=19% Similarity=0.167 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccc
Q 009536 361 GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGP 440 (532)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (532)
+|+....+.++.++.++..|.++||+|||.++.++.+..++...+.+. +.....++..=+.++..-+...
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~----------S~~F~afv~aR~l~Gi~kgnl~ 139 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL----------SRNFAAFVLARFLGGIFKGNLS 139 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHhhhhccCchH
Confidence 477788889999999999999999999999999999988887777666 3333333333455666666767
Q ss_pred ccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 441 VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 482 (532)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 482 (532)
+..++++|+++++.|+.+++.+++..++|.++||.+.|++..
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 788999999999999999999999999999999999999987
No 215
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.02 E-value=6.5e-09 Score=100.21 Aligned_cols=180 Identities=16% Similarity=0.040 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
|+...+.+.+.......+.+.+......+-++-|+ +..+..+..........+..+++..+.||+|||+.++++..++
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~--~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGF--TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM 345 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 33333333333344444445555566788888898 8888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh---cHH------HHHHHHHHHhhhhh-hhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcC
Q 009536 165 ILGAIISAQAH---SLD------EMLWGRFLVGLGIG-VNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI 234 (532)
Q Consensus 165 ~~~~~~~~~a~---~~~------~l~~~r~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 234 (532)
.+..+++...- +.. ..+++.++..++.+ +..|...-+.+|.+|++.|..++++.....-+...+-...-.
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp 425 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFP 425 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888877541 111 12233333333222 246778889999999999999999998888888777766666
Q ss_pred CCCCCcchhHHHHHhhHHHHHHHH-HHhcccccCh
Q 009536 235 PAEDDPHWWRTMLYIASLPGFILA-LGMQFTVESP 268 (532)
Q Consensus 235 ~l~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~~~p 268 (532)
.+.+..|. +.|....+++++.. ..+..+||+.
T Consensus 426 ~l~~~~g~--~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 426 PLQNVIGP--YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHhcc--hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 66666653 67777777776654 4556688874
No 216
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.02 E-value=1.6e-09 Score=120.43 Aligned_cols=150 Identities=16% Similarity=0.076 Sum_probs=119.9
Q ss_pred cccchhHHHH-HhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh---------
Q 009536 105 VMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--------- 174 (532)
Q Consensus 105 ~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--------- 174 (532)
.+...+|.+. +.+|. +..+.|++.+++.++.+++.++.|+++|++++++.+..+.++.+++.+..++.
T Consensus 243 ~~~~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (1140)
T PRK06814 243 VVLSQLPLLAKETLGG--DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPA 320 (1140)
T ss_pred HHHHHhHHHHHHHcCC--chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccc
Confidence 3333455554 45787 88899999999999999999999999999888877777776666666555443
Q ss_pred -----------hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchh
Q 009536 175 -----------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (532)
Q Consensus 175 -----------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~w 243 (532)
++.+.++++.++.|++.+...+...+++.+.+|+++||+++|+.+....+|..+++++++.+.....++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~ 400 (1140)
T PRK06814 321 QLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSI 400 (1140)
T ss_pred cccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCH
Confidence 677888889999999999999999999999999999999999999999999999999988886433226
Q ss_pred HHHHHhhHHHHHH
Q 009536 244 RTMLYIASLPGFI 256 (532)
Q Consensus 244 r~~f~~~~~~~~~ 256 (532)
...|++.++..++
T Consensus 401 ~~~~~~~~~~~~~ 413 (1140)
T PRK06814 401 PWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHH
Confidence 6666655544333
No 217
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.02 E-value=2.4e-09 Score=119.62 Aligned_cols=142 Identities=20% Similarity=0.185 Sum_probs=120.7
Q ss_pred HHHHHhhCCCCChh-HHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhh
Q 009536 111 VSIAKELGFEGNPI-LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGL 189 (532)
Q Consensus 111 ~~~~~~~~~~~~~~-~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 189 (532)
+.+.+++|. +.. +.+++.+.+.++..++.+++|+++||+++|+++.++.++.+++.++..+..+.+.++++.++.|+
T Consensus 257 ~~~~~~~g~--s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGL--DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 345667888 777 88999999999999999999999999999999999999998888888888899889999999999
Q ss_pred hhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCC-cchhHHHHHhhHHHHH
Q 009536 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD-PHWWRTMLYIASLPGF 255 (532)
Q Consensus 190 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~wr~~f~~~~~~~~ 255 (532)
+.+...+...+++.+.+|+++||+++++.+....+|.++++.+++.+... .+ +...|++.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~ 400 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLS-PAGLFYLIALVTL 400 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888887765432 23 5566665554443
No 218
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.02 E-value=8e-09 Score=100.78 Aligned_cols=156 Identities=17% Similarity=0.110 Sum_probs=112.3
Q ss_pred hhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccch
Q 009536 342 INGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 419 (532)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (532)
........|.+.++.+.+ +.++......++..++.+..|++.||+|||+.+..+..+.+++.+++..... .
T Consensus 19 ~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~-------~ 91 (410)
T TIGR00885 19 NDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE-------I 91 (410)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh-------h
Confidence 344445667777777766 5578888889999999999999999999999999999998888777544211 1
Q ss_pred hhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh---------------
Q 009536 420 HNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET--------------- 483 (532)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~--------------- 483 (532)
..........+..+.+.+. .+..+.++.+..|++++++..++.+...++|..++|.+.+.+...
T Consensus 92 ~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~ 171 (410)
T TIGR00885 92 MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSP 171 (410)
T ss_pred ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCH
Confidence 1222223333333443333 344556777888989999999999999999999999999877532
Q ss_pred -----------hCcchhhHhHHHHHHHHHHhh
Q 009536 484 -----------FGVAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 484 -----------~g~~~~~~~~~~~~~~~~~~~ 504 (532)
.+|+.+|.+.+++.++..++.
T Consensus 172 ~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 172 EELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888887777666554443
No 219
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=5.4e-09 Score=102.27 Aligned_cols=148 Identities=14% Similarity=0.111 Sum_probs=108.7
Q ss_pred HHHHHhhCCCCChhHHHHHHHHHH-HHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH---Hhh-hcHHHHHHHH-
Q 009536 111 VSIAKELGFEGNPILEGLVVSIFI-AGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS---AQA-HSLDEMLWGR- 184 (532)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~~~-l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-~~~~~l~~~r- 184 (532)
+.+.+++|. ++.+.+++.+... ++..++.++.|++.||+|+|+.+..+.++.++..+.. ++. ++.+.++++-
T Consensus 234 ~~l~~~~G~--~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 234 TFLIRGAGF--SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 456777888 8888999886654 5688999999999999999998887777766554433 343 4556555554
Q ss_pred ---HHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009536 185 ---FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (532)
Q Consensus 185 ---~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (532)
+..|++.+...+....++.+.+|.+++ ++.+...++|..+++.++|.+.+..| |+..|.+.++++++.+++.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH
Confidence 455666666677777777777776544 55555667777767778899999888 9999999888887776665
Q ss_pred cccc
Q 009536 262 QFTV 265 (532)
Q Consensus 262 ~~~~ 265 (532)
+..+
T Consensus 387 ~~~~ 390 (402)
T PRK11902 387 WLMR 390 (402)
T ss_pred HHHh
Confidence 4433
No 220
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.96 E-value=1.3e-08 Score=97.92 Aligned_cols=160 Identities=15% Similarity=0.032 Sum_probs=105.8
Q ss_pred hHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHHhhhhHhhhhhc-----CCchhh-hhhHHHHHHHHHHHHHHhcCCCC
Q 009536 344 GVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGALCASYLMDKE-----GRQKLL-IGSYLGMAISMLLVVGATSLPLD 415 (532)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 415 (532)
......|.+.++.|.+.. ++.... .+...+ .++.|++.||+ |||+.+ +.+.++.++....+.+...
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~---- 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP---- 79 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc----
Confidence 344456777888887744 333322 333333 88999999997 788864 5555555555445443211
Q ss_pred ccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC--------cc
Q 009536 416 EDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG--------VA 487 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g--------~~ 487 (532)
......+....+..........+...+++.|.+|+++|+.+.|+......+|..+++.+.+.+.+..| |+
T Consensus 80 --~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 80 --STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG 157 (356)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence 11222222222222222233346667888999999999999999999999999999999999998888 99
Q ss_pred hhhHhHHHHHHHHHHhhheeeccC
Q 009536 488 PVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
..|++.+++.++..+..++..+|.
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Confidence 999888877777665554445554
No 221
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.96 E-value=3.4e-08 Score=96.46 Aligned_cols=184 Identities=15% Similarity=0.080 Sum_probs=114.6
Q ss_pred HHHHHHHHHhhhcchhhHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHhhhhHhhhh----hcCCchhhhhh-HHHHH
Q 009536 328 FIGGALFLLQQFAGINGVLYFSSLTFQDVGITD--GALASLLVGVTNFAGALCASYLMD----KEGRQKLLIGS-YLGMA 400 (532)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~-~~~~~ 400 (532)
+.........++ .+.....+.+.+++..+.+. .+.......+.+++..++.|+++| |+|||+.++.. ....+
T Consensus 7 i~~~~~~~Giq~-~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 7 LRVASVAAGVQF-GWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 333333333333 34455556666778887763 366667778889999999999999 59999988765 44444
Q ss_pred HHHHHHHHHhcCCC--C---ccchhhH--HHHHHHHHHHHHhcc-cccccccccccccCcccc--chhHHHHHHHHHHHH
Q 009536 401 ISMLLVVGATSLPL--D---EDFSHNL--SILGTLFYIFTFAIG-AGPVTGLVIPELSSNRTR--GKIMGFSFSVHWVCN 470 (532)
Q Consensus 401 ~~~~~~~~~~~~~~--~---~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g~ 470 (532)
+++.++.+...... . +...... ......+...-+... ..+...+++.|.+|+++| +.+.++.+...++|+
T Consensus 86 ~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 55555544221100 0 0001111 111111111111221 233456889999998865 579999999999999
Q ss_pred HHHHHHHHHH--HHhh-------------CcchhhHhHHHHHHHHHHhhheeeccCC
Q 009536 471 FLVGLFFLDL--VETF-------------GVAPVYAGFGGVSLLSALFAYYFIVETK 512 (532)
Q Consensus 471 ~i~~~~~g~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (532)
.+++.+.+.. .+.+ +++..|++.+++.+++.++..+..+|..
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 9999988864 2222 3566788888888888888878877754
No 222
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.95 E-value=1.7e-08 Score=87.56 Aligned_cols=170 Identities=15% Similarity=0.111 Sum_probs=124.7
Q ss_pred CchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhH
Q 009536 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
.....++.++|++..+..+.....++. .+++.||+ ++...+-+.+....-.++.+++.|.++|++|++...+.+..
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~--fF~~rfGl--S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~ 338 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPM--FFQKRFGL--SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASAC 338 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHH--HHHHhhCC--ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHH
Confidence 344445666776666655555444443 67899999 88888888888777888999999999999999988877655
Q ss_pred HHHH-HHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcc
Q 009536 163 PLIL-GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (532)
Q Consensus 163 ~~~~-~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 241 (532)
+..+ +-....+ +++.=++...+.|+............++...|+++.|.+.+..+...++|..+.|++++.+.+..+
T Consensus 339 ~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 339 ILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 5433 3333333 333345677888998887777778888999999999999999999999999999999999998766
Q ss_pred h--hHHHHHh-hHHHHHHHH
Q 009536 242 W--WRTMLYI-ASLPGFILA 258 (532)
Q Consensus 242 ~--wr~~f~~-~~~~~~~~~ 258 (532)
+ |--.|.+ .+.+++...
T Consensus 417 ~y~~le~ffl~~~~~aL~sv 436 (459)
T KOG4686|consen 417 SYDNLEAFFLIIGLMALTSV 436 (459)
T ss_pred chhhHHHHHHHHHHHHHHHH
Confidence 4 4434443 344444333
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.95 E-value=1.2e-08 Score=96.19 Aligned_cols=161 Identities=28% Similarity=0.461 Sum_probs=130.2
Q ss_pred HHhhhhhhccccccchhHHHHHhhCCCCCh--hHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH
Q 009536 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNP--ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (532)
...+.............+.+..+++. +. ...++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 86 (338)
T COG0477 9 LAALLLGLDLGLLSPALPLLLSTLSL--SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL 86 (338)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHcCC--CchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 33444446667777788888888875 44 478999999999999999999999999999999988888767777777
Q ss_pred Hhhhc--HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCc-ccccchhhHhHH-HHHHHHHHHHHhcCCCCCC--cchhHH
Q 009536 172 AQAHS--LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQV-GTCLGIITSLFLGIPAEDD--PHWWRT 245 (532)
Q Consensus 172 ~~a~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~~~wr~ 245 (532)
++..+ .+.+++.|+++|++.+...+...+++.|++++ ++|+...+.... ...+|.++++.+++.+... .+ ||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 165 (338)
T COG0477 87 ALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWG-WRA 165 (338)
T ss_pred HhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHH
Confidence 77776 89999999999999999999999999999998 678988888888 5888888888777666544 33 999
Q ss_pred HHHhhHHHHHHH
Q 009536 246 MLYIASLPGFIL 257 (532)
Q Consensus 246 ~f~~~~~~~~~~ 257 (532)
.|.+........
T Consensus 166 ~~~~~~~~~~~~ 177 (338)
T COG0477 166 AFLLAALLGLLL 177 (338)
T ss_pred HHHHHHHHHHHH
Confidence 776666555443
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.94 E-value=7e-09 Score=102.32 Aligned_cols=147 Identities=19% Similarity=0.106 Sum_probs=121.1
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
...+.+..++..+.........+.+.++.-- ++...+++..++.++..++.+++++++||+|+|+++..+.++.+++.
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~--~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~ 304 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLG--NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGF 304 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhc--CchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHH
Confidence 4455555566666666666666766666422 34667888889999999999999999999999999999999999999
Q ss_pred HHHHhhh--cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCc-------ccccchhhHhHHHHHHHHHHHHHhcCCCC
Q 009536 169 IISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 169 ~~~~~a~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 237 (532)
++..+.+ |.+.+++.-++.|++.+...+...++++|..+. ++.|...+..+...-+|..+++.+.+.+.
T Consensus 305 ~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 305 LLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred HHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 9998886 999999999999999999999999999999873 33478888888888888888888776554
No 225
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.93 E-value=1e-08 Score=104.97 Aligned_cols=172 Identities=14% Similarity=0.025 Sum_probs=117.2
Q ss_pred HHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhc
Q 009536 334 FLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATS 411 (532)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 411 (532)
..+............++.+-++++.+ +.+++...+.++.+++.++.+++.||.+||+.+.++.++.+++.+++.+...
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf 120 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHF 120 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHH
Confidence 33333333344444555665566554 5577888889999999999999999999999999999999999888765321
Q ss_pred CC----CC-------------------c----------------cc--hhhHHHHHHHHHHHHHhccc-ccccccccccc
Q 009536 412 LP----LD-------------------E----------------DF--SHNLSILGTLFYIFTFAIGA-GPVTGLVIPEL 449 (532)
Q Consensus 412 ~~----~~-------------------~----------------~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 449 (532)
.. .. . .. .....++.+.-+..+.+.+. .+...+++.|.
T Consensus 121 ~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~ 200 (633)
T TIGR00805 121 LSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDF 200 (633)
T ss_pred hcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhcc
Confidence 00 00 0 00 00122222333333333333 47777899999
Q ss_pred cCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------C-cchhhHhHHHHHHHHHHhhh
Q 009536 450 SSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF---------------------G-VAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 450 ~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~---------------------g-~~~~~~~~~~~~~~~~~~~~ 505 (532)
+|+++|+...|+.+....+|..+|+.+.+.+.+.+ | |+..|++.+++.++.++..+
T Consensus 201 ~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 201 AKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred CCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887643 1 45567777766666555443
No 226
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.93 E-value=4.9e-08 Score=93.04 Aligned_cols=156 Identities=13% Similarity=0.072 Sum_probs=111.4
Q ss_pred hhHHHhHHHHHHHcCCC--h-hHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccch
Q 009536 343 NGVLYFSSLTFQDVGIT--D-GALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS 419 (532)
Q Consensus 343 ~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (532)
....+..|.+.++.|.+ + .+.....+..+..+..+.+|++.||+|.|+++.++.+..++..+++.+. .
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa---------~ 113 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG---------T 113 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH---------H
Confidence 34555566666677776 4 4677888889999999999999999999999999999888888888772 1
Q ss_pred hhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhH---hHHHH
Q 009536 420 HNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYA---GFGGV 496 (532)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~---~~~~~ 496 (532)
....+.+.=+..|.+-+.......++...+|+++|+++.|+.+....+|.++++++.+. ...+||+.... +..+.
T Consensus 114 -Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 114 -SVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVF 191 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Confidence 22222223233333333322677888899999999999999999999999999999998 55678665433 33333
Q ss_pred HHHHHHhhheeecc
Q 009536 497 SLLSALFAYYFIVE 510 (532)
Q Consensus 497 ~~~~~~~~~~~~~~ 510 (532)
..++.++. +++|.
T Consensus 192 ~~~a~~~a-~~LP~ 204 (511)
T TIGR00806 192 MTFSVFLA-LFLKR 204 (511)
T ss_pred HHHHHHHH-HhCCC
Confidence 44444443 44553
No 227
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.91 E-value=2.6e-09 Score=96.09 Aligned_cols=132 Identities=15% Similarity=0.151 Sum_probs=98.7
Q ss_pred HHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccc
Q 009536 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGS 213 (532)
Q Consensus 134 ~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~ 213 (532)
.+.-.-|.++.+++.||+|||+.+..++++++++.++...+.+-..+.+.-|..-++..+.+.+.+.|..|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34455788999999999999999999999999999988876443222222222233345567788889999999999999
Q ss_pred hhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccCh
Q 009536 214 LGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (532)
Q Consensus 214 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (532)
..|.-....-+|.++.|+++ ...+.. -..+..+.+..+++..+...++|-++
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999998 222222 23455566777777777777777543
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=98.91 E-value=4.7e-09 Score=104.27 Aligned_cols=128 Identities=14% Similarity=0.077 Sum_probs=99.7
Q ss_pred chhHHH-HHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhh--cHHHHHHHH
Q 009536 108 GPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGR 184 (532)
Q Consensus 108 ~~~~~~-~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r 184 (532)
...+.+ ++.+|. +....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..
T Consensus 249 ~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 326 (448)
T PRK09848 249 ASSLFYVRYVLND--TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVAL 326 (448)
T ss_pred hhheeeEeeecCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHH
Confidence 334433 334554 554444545555677888999999999999999999999999888887777653 677777788
Q ss_pred HHHhhhhhhhhhhhhHhhhhcCCcc-------cccchhhHhHHHHHHHHHHHHHhcCCCC
Q 009536 185 FLVGLGIGVNTVLVPIYISEVAPTK-------YRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 185 ~l~G~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 237 (532)
++.|+|.+...+...++..|..+.+ ++|...++.+....+|..+|+.+.+.+.
T Consensus 327 ~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 327 AIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999988754 3588899999999999999888776553
No 229
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.91 E-value=1.8e-07 Score=95.25 Aligned_cols=153 Identities=14% Similarity=0.133 Sum_probs=122.2
Q ss_pred cchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc-cchhHHHHHhhHHHHHHHHHHHhhhc--------H
Q 009536 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLILGAIISAQAHS--------L 177 (532)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~--------~ 177 (532)
......+.+.+|. +......+...+....-+..+++|.++|+ +|+++.++++.++..+|.++.+++.. .
T Consensus 8 aiLvlYl~~~lg~--~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~ 85 (654)
T TIGR00926 8 TILVLYFLNFLGF--SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHD 85 (654)
T ss_pred HHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHH
Confidence 3344566677888 77777888888888888999999999997 79999999999999999988877521 2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHhhhhcCCccc---ccchhhHhHHHHHHHHHHHHHhcCCCCCC-------cchhHHHH
Q 009536 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY---RGSLGTLCQVGTCLGIITSLFLGIPAEDD-------PHWWRTML 247 (532)
Q Consensus 178 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------~~~wr~~f 247 (532)
..++++-.+..+|.|+.-+...+...|-+++++ |...+.++..+.++|..+++++..++.+. .+ |...|
T Consensus 86 ~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~-~~~aF 164 (654)
T TIGR00926 86 LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC-YPLAF 164 (654)
T ss_pred HHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc-hHHHH
Confidence 335677888889999999999999999997543 56788888899999999998888777532 24 99999
Q ss_pred HhhHHHHHHHHHHhc
Q 009536 248 YIASLPGFILALGMQ 262 (532)
Q Consensus 248 ~~~~~~~~~~~~~~~ 262 (532)
.+.++..++.++...
T Consensus 165 ~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 165 GVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998888777665543
No 230
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.91 E-value=1.4e-06 Score=84.69 Aligned_cols=148 Identities=11% Similarity=-0.032 Sum_probs=107.3
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHHHHHhhCCC---CChhHHHHHHHHHHHHHHHH-HHhhhccccccchhHHHHHhh
Q 009536 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE---GNPILEGLVVSIFIAGAFVG-SISSGSLADKLGCRRTFQIDT 161 (532)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~l~~~~~-~~~~G~l~dr~Grr~~l~~~~ 161 (532)
++.++.+.+..|+..++.+ .+-.+.+.+.++ .+...+.|+-+...+...+. .++.+++++|++|++++-+..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 3445555555555555554 345566666552 23456788888887777666 899999999999999998888
Q ss_pred HHHHHHHHHHHhh----h---------------------------cHHHHHHHHHHHhhhhhhhhh-hhhHhhhhcCCcc
Q 009536 162 IPLILGAIISAQA----H---------------------------SLDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTK 209 (532)
Q Consensus 162 ~~~~~~~~~~~~a----~---------------------------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~ 209 (532)
..+....+++++. + +.|...+.-+...+....... .-..++.|.++.+
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~ 161 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTID 161 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 8877777776654 1 123333444555555555555 7788999999999
Q ss_pred cccchhhHhHHHHHHHHHHHHHhcCCCC
Q 009536 210 YRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 210 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 237 (532)
|-.|..++++.+.++|.++++.+..++.
T Consensus 162 qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 162 EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887765
No 231
>PRK10133 L-fucose transporter; Provisional
Probab=98.89 E-value=7.1e-08 Score=95.06 Aligned_cols=142 Identities=13% Similarity=0.075 Sum_probs=98.6
Q ss_pred HHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHh
Q 009536 333 LFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGAT 410 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (532)
+.++...........+.|.+-++.+.+ +.++....+.++..++.++.|++.||+|||+++..+..+.+++.+++....
T Consensus 33 ~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~ 112 (438)
T PRK10133 33 SLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA 112 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444556666778877777776 457888888999999999999999999999999999999988887653211
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 411 SLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
. .+....+....+..+.+.+. .+..+.++.+..|++++....++.+....+|..+++.+.+.+.
T Consensus 113 ~-------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 113 E-------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred h-------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11223333333333433333 3455566677766666666899999999999999998877654
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=98.87 E-value=9.5e-08 Score=95.44 Aligned_cols=182 Identities=13% Similarity=0.096 Sum_probs=109.6
Q ss_pred CCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHH
Q 009536 321 EPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG--ALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLG 398 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 398 (532)
+++.|..+........ .....+.+..+.+.+.++.+.++. +..... +.......+..|++.||+|+|+++.++.++
T Consensus 23 e~~Rw~~lva~~~~~~-~~g~~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSI-CTSFMYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3444444433333222 223344555677777777787754 333322 122223455789999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHH
Q 009536 399 MAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 477 (532)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 477 (532)
..++.+++++..... .....+.+.+.....+.+.+. .+.....+.+.+| ++||.+.|+......+|+++.+.+.
T Consensus 101 ~~iG~ll~ala~~~~----i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~ 175 (591)
T PTZ00207 101 FCLGTLLFALTFQEV----IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQ 175 (591)
T ss_pred HHHHHHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988887732100 001222222233333333322 2334455667787 5699999999999999998755555
Q ss_pred HHHHHhhCcchhhHhHHHHHHHHHHhhheeecc
Q 009536 478 LDLVETFGVAPVYAGFGGVSLLSALFAYYFIVE 510 (532)
Q Consensus 478 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (532)
..+.. .++...|++.+++.++.+++.+.+.+.
T Consensus 176 ~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 176 LAFFS-DNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 55544 356677777777777766666555543
No 233
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.86 E-value=7e-09 Score=97.98 Aligned_cols=142 Identities=18% Similarity=0.096 Sum_probs=124.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHh
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~ 201 (532)
++...|.+.+...+.-.+...+..++.+|+|.|+.++++..+.++=.++++++++.+.+.+.+.+.|+-.+........|
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcccccchhhHh-HHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhccc
Q 009536 202 ISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (532)
Q Consensus 202 i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
+.+.+|+|-.++...+. +...++|..+.+.++|.+.++.| .+.+|++.+.+.++..+...+.
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~ 399 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFT 399 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheee
Confidence 99999998877777774 78899999999999999999998 9999999888877766555553
No 234
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.81 E-value=1.2e-07 Score=89.08 Aligned_cols=135 Identities=18% Similarity=0.062 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcC
Q 009536 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (532)
Q Consensus 127 ~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 206 (532)
+.+.-+-.+...+..+.+-+..+|+..+.=+.+..++++++.++.++++|.+.=+++-.+.+++.|........+. ..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-HFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH-Hhc
Confidence 4456666667777778888889998866666777778888999999999999989999999999998888888764 455
Q ss_pred CcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHHHHHHHHHhcccccC
Q 009536 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQFTVES 267 (532)
Q Consensus 207 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (532)
++ ...+-++.|.+.+.++|+..-..+.. .+ .-|..+.+...+.++..+..+++.+.
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 54 36788888888888888877655554 22 14777777776666555555544333
No 235
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.81 E-value=2.3e-08 Score=99.85 Aligned_cols=142 Identities=14% Similarity=0.029 Sum_probs=102.7
Q ss_pred HHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHh
Q 009536 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ 173 (532)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 173 (532)
+..++............+.+.+...- +....+++.+...++..++.+++++++||+|+|+.+.++..+.+++.+...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~y~~~y~~~--~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~ 315 (473)
T PRK10429 238 GMALAYNIASNIINGFAIYYFTYVIG--DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLL 315 (473)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEECC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444444444432 4556677777777888999999999999999999999888877766655432
Q ss_pred -----hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCC-------cccccchhhHhHHHHHHHHHHHHHhcCCCC
Q 009536 174 -----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAP-------TKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 174 -----a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 237 (532)
.++.+.+++.-++.|++.+...+...++++|..+ +++.|..++......-+|..+++.+.|++.
T Consensus 316 ~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 316 MGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777778888999999999999999999966 233355888888888888888887776654
No 236
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.81 E-value=5.9e-07 Score=81.53 Aligned_cols=360 Identities=13% Similarity=0.058 Sum_probs=182.2
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccc-----ccchhHHHHH-h
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-----KLGCRRTFQI-D 160 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~d-----r~Grr~~l~~-~ 160 (532)
..+..+.+.+.+.+...+... .+|.+.+.=|. |.+..+...-+| .. ...-++|.++.| |+||||..++ +
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~v--Syt~~a~fS~ay-~P-~sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGV--SYTSQAIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCc--chhhhhhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 346677777888898888888 89998886676 555444322221 12 234678999999 9999987654 3
Q ss_pred hHHHHHHHHHHHh-----------hhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHH
Q 009536 161 TIPLILGAIISAQ-----------AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITS 229 (532)
Q Consensus 161 ~~~~~~~~~~~~~-----------a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 229 (532)
..+.+....+.+. .++...+...-++.-+..+....+.-.+.-.+..+++.|.+......+.+.|..++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 3333333333332 13333444455666667777777888888888888988988888878888887777
Q ss_pred HHhcCCCCCC------cchhH---------HHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchH
Q 009536 230 LFLGIPAEDD------PHWWR---------TMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEIN 294 (532)
Q Consensus 230 ~~~~~~l~~~------~~~wr---------~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (532)
..+--.+... .-+|. ...++.+.+.++...+..+..+++...
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~----------------------- 242 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES----------------------- 242 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh-----------------------
Confidence 6554433320 00011 112223333333333333444332210
Q ss_pred HHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHH
Q 009536 295 KAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFA 374 (532)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (532)
..++.....+....-.+++++-+..+.........=+ ++..-....+.-+-+.|....-+.... +..+.
T Consensus 243 -----~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~----gf~a~da~t~LkLle~Gv~ke~Lal~~--v~~~p 311 (510)
T KOG3574|consen 243 -----VDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKL----GFQAADALTSLKLLEHGVPKEELALIA--VPLVP 311 (510)
T ss_pred -----hhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHH----HhhhhhhccchHHHHcCCChhHheeee--eehhh
Confidence 0000000000011233455555554433332222211 222223333444456666643222111 33333
Q ss_pred HhhhhHhhhhhcC--Cchhh------hhhHHHHHHHHHHHHHHhcCCC-CccchhhHHHHHHH--HHHHHHhcccccccc
Q 009536 375 GALCASYLMDKEG--RQKLL------IGSYLGMAISMLLVVGATSLPL-DEDFSHNLSILGTL--FYIFTFAIGAGPVTG 443 (532)
Q Consensus 375 ~~~~~g~l~d~~g--~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 443 (532)
..++.++...|+. +|++. ..-.+...+...+....+.+.- +........++.++ .+..++.........
T Consensus 312 lqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~m 391 (510)
T KOG3574|consen 312 LQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGM 391 (510)
T ss_pred HHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4444444444431 22111 1111222222223333222221 11111122222221 111222222223344
Q ss_pred cccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009536 444 LVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 485 (532)
Q Consensus 444 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 485 (532)
+..+++.+|..-|+.+.+.|+..++|+-.-..+...+.|.++
T Consensus 392 af~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 392 AFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 667788899999999999999999999988888888887644
No 237
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.3e-07 Score=92.30 Aligned_cols=142 Identities=20% Similarity=0.199 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcc-c
Q 009536 360 DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIG-A 438 (532)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 438 (532)
+.++.......+.+++.+.+|++.||+|.|+++..+.++.+++.++........ .. .+.++=+..|++.+ .
T Consensus 74 ~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-------~~-~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 74 EKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-------FY-LLLVLRFLQGLGQGVL 145 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-------ch-hhHHHHHHhHHHHhHH
Confidence 457888888999999999999999999999999999999998888887754311 11 22333333343333 3
Q ss_pred ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh-hCcchhhHhHHHHHHHHHHhhheeec
Q 009536 439 GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET-FGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
.|....+..+-.|+++|++..++.....++|.+++-++.|.+.+. .||+..|++.+++.++..++.+++..
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 578888999999999999999999999999999999999999999 99999999999999888777665554
No 238
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.75 E-value=1.6e-07 Score=85.08 Aligned_cols=158 Identities=17% Similarity=0.156 Sum_probs=128.2
Q ss_pred ccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-chhHHHHHhhHHHHHHHHHHHhhhcHHHHHH
Q 009536 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (532)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~ 182 (532)
...-.-+|.+..|-|+ |..+.|++.+...+.....++..-.+.+|. .+|+..+...+++.++.+.+.+.+.-..+..
T Consensus 225 Y~~~~WLP~ili~~G~--sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw 302 (395)
T COG2807 225 YIVIGWLPAILIDRGL--SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW 302 (395)
T ss_pred HHHHHHHHHHHHHcCC--CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 3334457899999999 999999999999999999999999999964 5788888888888888888888765433333
Q ss_pred HHHHHhhhhhhhhhhhhHhhhhcCCcc-cccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009536 183 GRFLVGLGIGVNTVLVPIYISEVAPTK-YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (532)
Q Consensus 183 ~r~l~G~~~g~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (532)
-++.|+|.|..++.+...+.+..+.. +-++..++.+....+=..+||.+.|++-|..++|+..++..+...++..+.-
T Consensus 303 -~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 303 -ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred -HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 49999999999999999999887644 4466677777777777888999999999988889999988777777666555
Q ss_pred ccc
Q 009536 262 QFT 264 (532)
Q Consensus 262 ~~~ 264 (532)
+..
T Consensus 382 l~a 384 (395)
T COG2807 382 LRA 384 (395)
T ss_pred hhc
Confidence 443
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=98.74 E-value=8.3e-08 Score=95.22 Aligned_cols=116 Identities=15% Similarity=0.076 Sum_probs=89.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHh--hhcHHHHHHHHHHHhhhhhhhhhhhhH
Q 009536 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ--AHSLDEMLWGRFLVGLGIGVNTVLVPI 200 (532)
Q Consensus 123 ~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--a~~~~~l~~~r~l~G~~~g~~~~~~~~ 200 (532)
+...+.+.....++..++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456666777888889999999999999999999888776654443333 356777888889999999999999999
Q ss_pred hhhhcCCc-------ccccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 201 YISEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 201 ~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
+++|..+. ++.|...+.......+|..+|+.+++.+.+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998862 223556788888888888888888876544
No 240
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.71 E-value=1.4e-07 Score=89.57 Aligned_cols=144 Identities=12% Similarity=0.077 Sum_probs=104.0
Q ss_pred CChh--HHHHHHHHHHHHHHhhhhHhhhhh-cCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHH
Q 009536 358 ITDG--ALASLLVGVTNFAGALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTF 434 (532)
Q Consensus 358 ~~~~--~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (532)
.++. .-....+....-+..+++||++|| +|+|+.+..+.+++.++.+++.... ......+...+. ....
T Consensus 58 ~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~-------~~~~~gl~i~L~-~I~i 129 (498)
T COG3104 58 FDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS-------VSGPGGLYIGLA-LIIV 129 (498)
T ss_pred cChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc-------cccccHHHHHHH-HHHh
Confidence 5543 333344444455677899999999 5999999999999999999988721 011112222222 2224
Q ss_pred hccc-ccccccccccccCcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeec
Q 009536 435 AIGA-GPVTGLVIPELSSNR--TRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 435 ~~~~-~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
+.|. =+....++.|++|++ +|..++++.++.-++|+.++|.+.+++.+..||+..|.+.++-..++.+..+...+
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 4444 366677888888643 47888999999999999999999999999999999999888888887777655543
No 241
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.69 E-value=6.9e-08 Score=68.38 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=74.5
Q ss_pred hhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHH
Q 009536 99 FGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLD 178 (532)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~ 178 (532)
.++.+..++|.+|.|++|.++ |..+.||+.+..++||.+|.+...++.++..+++.+..++++..+..+.+++.++++
T Consensus 4 mGigRFayTplLP~M~~~~~l--s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGL--SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 466778889999999999999 999999999999999999999999999999999999999999999999999998876
Q ss_pred HH
Q 009536 179 EM 180 (532)
Q Consensus 179 ~l 180 (532)
..
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 242
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.69 E-value=1.6e-08 Score=95.93 Aligned_cols=164 Identities=18% Similarity=0.098 Sum_probs=140.1
Q ss_pred hhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhc
Q 009536 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS 176 (532)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~ 176 (532)
++.++..+.+...+---.||.+. .+...|.....-..+-++.-++.+++.+++|+-+++.+++.+..+=.+..++.+|
T Consensus 381 v~mG~g~~lv~tFLfWHled~~~--~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n 458 (618)
T KOG3762|consen 381 VVMGAGVGLVFTFLFWHLEDLGG--IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN 458 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC--cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC
Confidence 33444444444444445677775 7777788888888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhH-HHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009536 177 LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (532)
Q Consensus 177 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (532)
.|+.+..-+++|+..+..+.+..+|+++..||+-|..+.++.+ ...++|-.+|.++||.+....+ =|..|++.++.++
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giAcl 537 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIACL 537 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999985 6778999999999999999988 8999999888888
Q ss_pred HHHHHhcc
Q 009536 256 ILALGMQF 263 (532)
Q Consensus 256 ~~~~~~~~ 263 (532)
+.++....
T Consensus 538 ~~l~~~~~ 545 (618)
T KOG3762|consen 538 VTLALFIS 545 (618)
T ss_pred HHHHHHHH
Confidence 76665543
No 243
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.68 E-value=4e-08 Score=84.51 Aligned_cols=360 Identities=15% Similarity=0.100 Sum_probs=178.1
Q ss_pred cccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHH
Q 009536 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (532)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~ 182 (532)
....+|.+-.+-+.++. ...++|.+...-+-..++...+.|-|+|+-|||+.-+.-++...++++ .-.++.|-.+++
T Consensus 53 DWLQgPYvYyLYstYgF--gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmV 129 (454)
T KOG4332|consen 53 DWLQGPYVYYLYSTYGF--GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMV 129 (454)
T ss_pred hhhcCceeeeeehhcCc--cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEee
Confidence 34445555566677787 677778777777777788889999999999999965554444433322 234688999999
Q ss_pred HHHHHhhhhhhhhhhhhHhh-hhcCCcccccchhhHhH--------HHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHH
Q 009536 183 GRFLVGLGIGVNTVLVPIYI-SEVAPTKYRGSLGTLCQ--------VGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASL 252 (532)
Q Consensus 183 ~r~l~G~~~g~~~~~~~~~i-~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~~~~~l~~~~~-~wr~~f~~~~~ 252 (532)
+|.+.|+..+..+.+--++. .|.-. +|+.---+.. .+..+-.+++.+.+..+.+..+ +--.+|-..+.
T Consensus 130 GR~LGGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAac 207 (454)
T KOG4332|consen 130 GRVLGGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAAC 207 (454)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence 99999999999888887764 44332 2332211111 2223333444444444433221 02233333322
Q ss_pred HHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHH
Q 009536 253 PGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGA 332 (532)
Q Consensus 253 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (532)
+..+...+.+- .|-..-+++.+.+..+... +...+.+..+++ ..+...
T Consensus 208 fLaigmAvil~-----~W~ENygdps~~kdlltqf------------------------~gaa~aiaSD~k---i~LLG~ 255 (454)
T KOG4332|consen 208 FLAIGMAVILS-----SWSENYGDPSENKDLLTQF------------------------KGAARAIASDEK---IALLGA 255 (454)
T ss_pred HHHHHHHHHHh-----hhhhccCChhhhHHHHHHh------------------------hHhHHHHhcchH---HHHHHH
Confidence 22222111110 0111111111111111000 111122222222 233333
Q ss_pred HHHHhhhcchhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCc--hhhhhhHHHHHHHHHHHHHHh
Q 009536 333 LFLLQQFAGINGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQ--KLLIGSYLGMAISMLLVVGAT 410 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~ 410 (532)
+...+....+.....|.|..-.+-....-+..+..+.++.++|+-+..++..|-..| ..+.+.+.+.++.+.+.....
T Consensus 256 iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~ 335 (454)
T KOG4332|consen 256 IQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTS 335 (454)
T ss_pred HHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 343333333444444444432111112336777777777888877777776664433 344555555544444433322
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH--hhCcch
Q 009536 411 SLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE--TFGVAP 488 (532)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~--~~g~~~ 488 (532)
.... ........++..+.+-.+.+. .+|...-+-.+..|.+.|++.+-.+..--++...++-...- .+ ..+-+.
T Consensus 336 ~vsP-~kes~~~s~i~F~~~E~cvGl-fwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh--~~~~p~~tr~ 411 (454)
T KOG4332|consen 336 SVSP-SKESPSESLIGFCLFEACVGL-FWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLH--VDAFPTTTRN 411 (454)
T ss_pred ccCC-CcCCchHHHHHHHHHHHHHhh-cchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecc--cccCccccch
Confidence 2111 122333344444444444443 45666667778889988887766554433433332211100 11 123445
Q ss_pred hhHhHHHHHHHHHHh
Q 009536 489 VYAGFGGVSLLSALF 503 (532)
Q Consensus 489 ~~~~~~~~~~~~~~~ 503 (532)
.|-++.+...++.+.
T Consensus 412 mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 412 MFGICSAFLFVASIL 426 (454)
T ss_pred hhhhhHHHHHHHHHH
Confidence 666666555555443
No 244
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.66 E-value=1.7e-07 Score=95.17 Aligned_cols=139 Identities=21% Similarity=0.117 Sum_probs=108.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc
Q 009536 360 DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG 439 (532)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (532)
...+....+.++.++|.++.|.++||+|||++++.+.++..++.++.++. .+...+...=++.+.+..+..
T Consensus 119 ~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a---------~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 119 LVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA---------PNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh---------CcHHHHHHHHHHHHhhccchh
Confidence 34567778889999999999999999999999999999999988777772 333334444444444445556
Q ss_pred cccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccC
Q 009536 440 PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
.+...+..|.++++.|+.+..+ ..+...++.+++...+++.. +|++.+++......+..++ +++.+|.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 7778889999999999999999 88888999999999998887 7888888877777766555 3444443
No 245
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.3e-06 Score=80.62 Aligned_cols=155 Identities=17% Similarity=0.112 Sum_probs=114.1
Q ss_pred hhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchh
Q 009536 343 NGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSH 420 (532)
Q Consensus 343 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (532)
...-...|.+.+..+.+ ++++....+..+-.++.+..+++.+|+|+|+-++.++.++++++.++..... ..
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~-------~~ 102 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS-------SK 102 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh-------hh
Confidence 33444455555544444 6788888888999999999999999999999999999999999998865332 33
Q ss_pred hHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh----------------
Q 009536 421 NLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET---------------- 483 (532)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~---------------- 483 (532)
........++..+.+.+. ....+.++..+.+++....-+.+.+.++.+|++++|.+.+.+..+
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~ 182 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKG 182 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHH
Confidence 344444444555555554 366678888888888888889999999999999999999998873
Q ss_pred ---hCcchhhHhHHHHHHHHHHhh
Q 009536 484 ---FGVAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 484 ---~g~~~~~~~~~~~~~~~~~~~ 504 (532)
..++.++...+...++..+..
T Consensus 183 ~~~~~v~~pYl~~~~~lvll~v~~ 206 (422)
T COG0738 183 ADASSVQFPYLILAGLLVLLAVLI 206 (422)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHH
Confidence 125566666666555544443
No 246
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.55 E-value=7.8e-07 Score=87.23 Aligned_cols=145 Identities=16% Similarity=0.170 Sum_probs=112.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccc
Q 009536 360 DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAG 439 (532)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (532)
+-+.....+.++.+++.+.++.+.||++..+.+....++..+..++... ..+...+.++-++.+.+..+.+
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---------~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---------VHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---------HhhhHHHHHHHHHHHHHhcccc
Confidence 4467778888999999999999999999555554444443333322222 1334455555666666677778
Q ss_pred cccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH------hhCcchhhHhHHHHHHHHHHhhheeeccCCC
Q 009536 440 PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE------TFGVAPVYAGFGGVSLLSALFAYYFIVETKG 513 (532)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (532)
|....++...+.+++|+.-+|+.+...++|+++|+.+...+.. ..||++.|++-+++.++..+++++++|+...
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 8888999999999999999999999999999999999988743 4679999999999999999998888876543
No 247
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.54 E-value=2.9e-07 Score=91.41 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=107.4
Q ss_pred HhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh----------hcHHHHHHHH
Q 009536 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA----------HSLDEMLWGR 184 (532)
Q Consensus 115 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----------~~~~~l~~~r 184 (532)
+.+|. ++.+.|++.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-
T Consensus 281 ~~lG~--s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPG--GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCC--CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 46777 89999999999999999999999999999999999999999999888664321 3334455667
Q ss_pred HHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc
Q 009536 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (532)
Q Consensus 185 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 240 (532)
++.+++.+........++.+..|++++|...++.....++|..+++.+++.+.+..
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999999999999999999888776543
No 248
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.53 E-value=4e-07 Score=85.03 Aligned_cols=178 Identities=15% Similarity=0.041 Sum_probs=133.6
Q ss_pred HHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHH------HHHHH-HHHHHHHHHHHhhhccccccchhHHHHH
Q 009536 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILE------GLVVS-IFIAGAFVGSISSGSLADKLGCRRTFQI 159 (532)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~s-~~~l~~~~~~~~~G~l~dr~Grr~~l~~ 159 (532)
+.++..+...|+.-......+.....+.+..++..+.... ..... +-..++..+..+...+.|+.|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5577778888888888888888888888888873222211 11111 1223333466778889999999999999
Q ss_pred hhHHHHHHHHHHHhhhc-H-------HHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHH
Q 009536 160 DTIPLILGAIISAQAHS-L-------DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (532)
Q Consensus 160 ~~~~~~~~~~~~~~a~~-~-------~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 231 (532)
|.+++++..+..+...| . ....+..++.-+| .......+-+|.+|.+-|+..-|+..+..-.|.++|..
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 99999999999998766 1 1122233333333 33344556799999999999999999999999999999
Q ss_pred hcCCCCC-----CcchhHHHHHhhHHHHHHHHHHhcccccCh
Q 009536 232 LGIPAED-----DPHWWRTMLYIASLPGFILALGMQFTVESP 268 (532)
Q Consensus 232 ~~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (532)
.-.++.+ ..+ -|+.|++.+...++..+..+++||+.
T Consensus 461 ~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred HhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeeccc
Confidence 9888887 555 89999999999999999999999874
No 249
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.52 E-value=2.1e-06 Score=86.66 Aligned_cols=138 Identities=17% Similarity=0.150 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-cc
Q 009536 362 ALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GP 440 (532)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 440 (532)
++......++..++.++.|+++|++|||+.+.++.+...++.++..... ....+...=+..+++.|. ..
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~----------~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP----------SWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh----------hHHHHHHHHHHhccchhhhhh
Confidence 6888888999999999999999999999999999999999999988832 333333333334444443 34
Q ss_pred ccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh--CcchhhHhHHHHHHHHHHhhheeeccC
Q 009536 441 VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETF--GVAPVYAGFGGVSLLSALFAYYFIVET 511 (532)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (532)
+...+.+|..|++.||...+..+....+|..++ .+.+...++. +|+..+.+..+.+++..+. .++.||+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 566889999999999999999999998777777 6666666553 7887777766666666655 5666653
No 250
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.50 E-value=7.9e-07 Score=79.72 Aligned_cols=350 Identities=15% Similarity=0.122 Sum_probs=199.6
Q ss_pred HHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccc
Q 009536 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGS 213 (532)
Q Consensus 134 ~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~ 213 (532)
.-.+.+.-++.=.+.|..-.|+++++-.+.......+.-+.++.+.+=+.-++-|...+ ...+-++++-+..+++++.+
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqr 130 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKR 130 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHH
Confidence 44455666677789999999999999888888888888899999999999999999865 66778889999999999999
Q ss_pred hhhHhHHHHHHHHHHHHHhcCCCCCCcc-hhHHHHHhhHHHHHHHHHHhcccccChhHHhhcCChhHHHHHHHHHcCCcc
Q 009536 214 LGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESE 292 (532)
Q Consensus 214 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (532)
+.+.-.+..-.|-..|..++..+..... +....-.+......+..+..+++|..+|.+.-+.+.++.. ..+..+.+.
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~--v~~~e~~~~ 208 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS--VGDLEEMNP 208 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccce--eccchhcCc
Confidence 9999998888888888888877765443 1344444544445555666677776654332222222110 000000000
Q ss_pred hHHHHHHHHHHHHhccCCCcchhhhhhcCCcchHHHHHHHHHHHhhhcchhhHHHhHHHHHHHcCCChh----HHHHHHH
Q 009536 293 INKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGGALFLLQQFAGINGVLYFSSLTFQDVGITDG----ALASLLV 368 (532)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 368 (532)
..+.....+...........+..++|.. +...+.+....+++.-...|....-+....... |..=...
T Consensus 209 ----~~~~~~~l~~~~~~l~~~l~~~y~np~l----l~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~ 280 (433)
T KOG3810|consen 209 ----QASYMSYLRGAFVLLWRDLQECYSNPRL----LKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVS 280 (433)
T ss_pred ----cchhhHHHHHHHHHHHHHHHHHhcCchh----hhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHH
Confidence 0000000000000001123334445432 222334444455666677777777666643332 3334445
Q ss_pred HHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccccccccc
Q 009536 369 GVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPE 448 (532)
Q Consensus 369 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (532)
.+.+.++.+..|.+.-.+.|..-+.++..-...+..++.... ..+.++......++...+... .++....+++
T Consensus 281 tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~------t~~Iw~~Ya~yvlfr~~y~l~-itiA~~~iA~ 353 (433)
T KOG3810|consen 281 TLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ------TQHIWVCYAGYVLFRVIYQLT-ITIATFQIAR 353 (433)
T ss_pred HHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhc------ccceehhhhhHHHHHhhHhhh-hhHHHHHHHH
Confidence 666777888888887777666433333332222222222211 122233333333333333332 2333344555
Q ss_pred ccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-----------cchhhHhHHHHHHHHHHhh
Q 009536 449 LSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG-----------VAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 449 ~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-----------~~~~~~~~~~~~~~~~~~~ 504 (532)
....+.-|..+|+..++.-+-..+-..+ ..|..| |..-|.+.+++.++.....
T Consensus 354 nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred hhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHH
Confidence 5677788999998776555444333322 234222 4445667777777765544
No 251
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.47 E-value=1e-06 Score=84.66 Aligned_cols=149 Identities=15% Similarity=0.060 Sum_probs=105.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhHhhhhhcCC-chhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc
Q 009536 360 DGALASLLVGVTNFAGALCASYLMDKEGR-QKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA 438 (532)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (532)
-.|+......++..++.++.|+...|.+. |+.++.+.++++++.++.......+ +....+....=+..|++.+.
T Consensus 72 ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~-----~~~~y~mL~~R~l~Gvg~~n 146 (488)
T KOG2325|consen 72 FFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP-----NGVKYLMLVARILTGVGVGN 146 (488)
T ss_pred hhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc-----cchHHHHHHHHHHcCcCccc
Confidence 34788888999999999999999999886 7888889999999998885543322 21333344444445555555
Q ss_pred ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh--hC-----------cchhhHhHHHHHHHHHHhhh
Q 009536 439 GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET--FG-----------VAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~--~g-----------~~~~~~~~~~~~~~~~~~~~ 505 (532)
....-.|+++..-.+.|.++++..+...-+|.++||.+...+... .| |..+-++.+.+.++..++..
T Consensus 147 ~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 147 FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 567778888877777899999988887778888887765544321 01 45666777888888777777
Q ss_pred eeeccCCC
Q 009536 506 YFIVETKG 513 (532)
Q Consensus 506 ~~~~~~~~ 513 (532)
++.+|..+
T Consensus 227 ~~f~E~~~ 234 (488)
T KOG2325|consen 227 FFFKEVYR 234 (488)
T ss_pred hheeeccc
Confidence 77766443
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.44 E-value=3.2e-06 Score=68.85 Aligned_cols=106 Identities=10% Similarity=0.062 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCc
Q 009536 129 VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT 208 (532)
Q Consensus 129 ~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 208 (532)
-.++......+++++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-.+.|++.+..+++...++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3555566677888888999999999999999999998655554 456788899999999999999999999999999999
Q ss_pred ccccchhhHhHHHHHHHHHHHHHhcCC
Q 009536 209 KYRGSLGTLCQVGTCLGIITSLFLGIP 235 (532)
Q Consensus 209 ~~r~~~~~~~~~~~~~g~~~g~~~~~~ 235 (532)
++|++..+++......+.++|.++.-.
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888888888888766543
No 253
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.43 E-value=4.5e-06 Score=73.90 Aligned_cols=142 Identities=11% Similarity=0.023 Sum_probs=96.9
Q ss_pred hhhcchhhHHHhHHHHHHHcCCChhH--HHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCC
Q 009536 337 QQFAGINGVLYFSSLTFQDVGITDGA--LASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL 414 (532)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (532)
......+.+..|.+.+-+..+.++.. .......++..+ .+..|.+.|++|++.++.++.....++..++.....-..
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i 91 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI 91 (250)
T ss_pred HhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 33445667788888888888888664 334445566665 478899999999999999999999999988877543221
Q ss_pred CccchhhHHHHHHHHHHHHHhccc-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 415 DEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
.....+...+..+..+.+.+. .........+.+|. +||++.|+.-....+++++-..+...+.+.
T Consensus 92 ---~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 92 ---PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred ---CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 112333333343444433332 23333334477875 699999999999999998888877776654
No 254
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.43 E-value=3e-06 Score=81.30 Aligned_cols=147 Identities=17% Similarity=0.189 Sum_probs=109.6
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
+...++..++.....+..+.....+.+ +.+++++....+.......+..++.+++.++++|+|+|+++.++.++.+++.
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~-y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVT-YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGY 316 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEE-EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 444444445555555555555544433 3444467777788888888888889999999999999999999999999999
Q ss_pred HHHHhhh--cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCc-------ccccchhhHhHHHHHHHHHHHHHhcCCC
Q 009536 169 IISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (532)
Q Consensus 169 ~~~~~a~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l 236 (532)
++.-+.+ +.+.+++..++.++|.+...+...++++|..+- +.-|...+......=+|..++..+.++.
T Consensus 317 ~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 317 LLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred HHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988875 788889999999999999999999999887753 2226666766666666666666554443
No 255
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=5.1e-06 Score=80.96 Aligned_cols=138 Identities=18% Similarity=0.154 Sum_probs=109.3
Q ss_pred HHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccc
Q 009536 368 VGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIP 447 (532)
Q Consensus 368 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (532)
.++..++..+..|.++|++|||..+........+..+.+.+ ..++.++ .....+.........+++++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~----------~~~~~~~--~~~l~g~~~~~~s~~~a~va 138 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF----------QGYWFFL--LLGLSGGFSAIFSVGFAYVA 138 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH----------HHHHHhh--hcccccchhhhhhhhhhhee
Confidence 36777888899999999999999999888888777777766 2222222 22222222233456778899
Q ss_pred cccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeeccCCCCCHH
Q 009536 448 ELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIVETKGRSLE 517 (532)
Q Consensus 448 ~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (532)
+....+.|....|+.+.....+..++|.+.+.+.+..|+..+|.+..+..++..+...+++||+..++.+
T Consensus 139 dis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 139 DISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred eccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 9999999999999999999999999999999999999999999999999999998888888887655433
No 256
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.39 E-value=8.4e-09 Score=102.78 Aligned_cols=160 Identities=19% Similarity=0.097 Sum_probs=103.0
Q ss_pred ccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHH--h--h-h---
Q 009536 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA--Q--A-H--- 175 (532)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--a-~--- 175 (532)
.......+.+.++.+. +.. -+......+...++.++...+.||+|||++++.+..+.+++.+..+ . . +
T Consensus 270 ~~~~~~~~~i~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGI--SNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSS 345 (451)
T ss_pred cccccccccccccccc--ccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344445667777776 333 1222233344556677777999999999999999999888887775 1 1 1
Q ss_pred --cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHH
Q 009536 176 --SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLP 253 (532)
Q Consensus 176 --~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~ 253 (532)
++..+............+..+....+..|.+|.+.|++..++......++..+++.+...+.+..+ -...|++.+..
T Consensus 346 ~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~ 424 (451)
T PF00083_consen 346 WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGV 424 (451)
T ss_pred ccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccchhhHHH
Confidence 122222222211122223456666788999999999999999998888999888888877776554 13444554444
Q ss_pred HHH-HHHHhcccccCh
Q 009536 254 GFI-LALGMQFTVESP 268 (532)
Q Consensus 254 ~~~-~~~~~~~~~~~p 268 (532)
+++ .++..+++||+.
T Consensus 425 ~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 425 CLIAIIFVYFFLPETK 440 (451)
T ss_pred HHHHHhheeEEEeeCC
Confidence 444 445567788873
No 257
>PRK11462 putative transporter; Provisional
Probab=98.35 E-value=8.9e-06 Score=80.80 Aligned_cols=115 Identities=15% Similarity=0.020 Sum_probs=75.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhh--cHHHHHHHHHHHhhhhhhhhhhhh
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGRFLVGLGIGVNTVLVP 199 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~g~~~~~~~ 199 (532)
++...+++.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456778888899999999999999999999988766555544444433332 233445555677888777777767
Q ss_pred HhhhhcCC-------cccccchhhHhHHHHHHHHHHHHHhcCCC
Q 009536 200 IYISEVAP-------TKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (532)
Q Consensus 200 ~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 236 (532)
+++.|..+ +++.|..++......-+|..+++.+++.+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777765 22224445665566666666666555443
No 258
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.30 E-value=6.5e-06 Score=76.80 Aligned_cols=149 Identities=17% Similarity=0.142 Sum_probs=121.8
Q ss_pred HHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccc-ccchhHHHHHhhHHHHHHHHHHHhh---hcHHHHHHHHHH
Q 009536 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-KLGCRRTFQIDTIPLILGAIISAQA---HSLDEMLWGRFL 186 (532)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l 186 (532)
|+=.+-||+ +..+..-+.+.+..|..++....|++.. |.++|+.-.+|+.+.+++..+..++ .+.+.+...-++
T Consensus 233 Pygg~Vfgm--sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 233 PYGGEVFGM--SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred CchhHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 344566888 8888899999999999999999998877 7888888888888887777765544 578889999999
Q ss_pred HhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCc---------chhHHHHHhhHHHHHHH
Q 009536 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------HWWRTMLYIASLPGFIL 257 (532)
Q Consensus 187 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------~~wr~~f~~~~~~~~~~ 257 (532)
.|++.|.......+...+...+++.|..+|.++....++..++..+++.+.|.. ..+-..|.+.++..++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998888665421 12667777766666655
Q ss_pred HHHh
Q 009536 258 ALGM 261 (532)
Q Consensus 258 ~~~~ 261 (532)
+++.
T Consensus 391 ~~ll 394 (403)
T PF03209_consen 391 LVLL 394 (403)
T ss_pred HHHH
Confidence 5443
No 259
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.28 E-value=0.00043 Score=69.56 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=129.8
Q ss_pred CchHHHHHHHHHHhhhhhhcc-ccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccccc-chhHHHHHh
Q 009536 83 LPAFPHVLIASMSNFLFGYHI-GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQID 160 (532)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~ 160 (532)
...|+....+.....+..+.. +.....+..+.++++. +...+.-..+.+.-......+.++.++|-| ||-+++.++
T Consensus 33 ~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~--~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~ 110 (571)
T KOG1237|consen 33 TGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHA--SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIG 110 (571)
T ss_pred echhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhcc--chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 344444433333333333333 4456777888999998 567777778888888888889999999975 899999999
Q ss_pred hHHHHHHHHHHHhhhcH-------------------------HHHHHHHHHHhhhhhhhhhhhhHhhhhcCC---ccc--
Q 009536 161 TIPLILGAIISAQAHSL-------------------------DEMLWGRFLVGLGIGVNTVLVPIYISEVAP---TKY-- 210 (532)
Q Consensus 161 ~~~~~~~~~~~~~a~~~-------------------------~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~~~-- 210 (532)
.++..++.++..++... ..++...-+..+|.|+.-+...+.-+|-++ +++
T Consensus 111 s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~ 190 (571)
T KOG1237|consen 111 SLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVK 190 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhh
Confidence 99988887665543211 245666778888999999999999999998 322
Q ss_pred -ccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHh
Q 009536 211 -RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (532)
Q Consensus 211 -r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 261 (532)
+..-+.++....++|..++..+-.+..+..+ |.+-|.+..+..++.++++
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIF 241 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHH
Confidence 2367888888999999999988888877777 9999988777776655544
No 260
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.26 E-value=7.7e-05 Score=71.12 Aligned_cols=144 Identities=13% Similarity=0.119 Sum_probs=83.7
Q ss_pred HHHHHHhhhhhhccccccchhHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHHhhhcccc-----ccchhHHHHHhh-
Q 009536 90 LIASMSNFLFGYHIGVMNGPIVSIAKE--LGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-----KLGCRRTFQIDT- 161 (532)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~d-----r~Grr~~l~~~~- 161 (532)
.++.+.+++.+...+.....+|.+.++ -+. +..+.+...- -...+. .-++|.++.| |+||||..++=.
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~--sy~q~~~fSl-a~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q 78 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKV--SYSQQAIFSL-ASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQ 78 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCC--ChhHheeeee-eechhH-HHHhhhhhhhhhcccccCCcchhhhHHH
Confidence 455666788888888877778888887 455 6666553221 111111 2445555555 899998776532
Q ss_pred HHHHHHHHHHHhhh----------------------c--HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhH
Q 009536 162 IPLILGAIISAQAH----------------------S--LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTL 217 (532)
Q Consensus 162 ~~~~~~~~~~~~a~----------------------~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~ 217 (532)
.+.++..+..+..- + ...+...-++.=+-.+.--.+.-.+.-....+++++.+..-
T Consensus 79 ~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc 158 (544)
T PF13000_consen 79 YLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC 158 (544)
T ss_pred HHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence 22233333322111 0 11222333333333445555566666677788889988888
Q ss_pred hHHHHHHHHHHHHHhcCCCC
Q 009536 218 CQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 218 ~~~~~~~g~~~g~~~~~~l~ 237 (532)
...|.++|..++..+--.+.
T Consensus 159 qtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 159 QTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HHhHhhhhHHHHHHHHHhhC
Confidence 88888888888766654443
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.20 E-value=4.1e-06 Score=59.15 Aligned_cols=71 Identities=23% Similarity=0.302 Sum_probs=60.5
Q ss_pred HHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHH
Q 009536 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (532)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 164 (532)
+....+......+...|.+|...++.|+ ++.++|.+.++..+...++.+++|.++||+++++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl--~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGL--SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444566666777788889999999999 9999999999999999999999999999999988887766554
No 262
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.19 E-value=0.00052 Score=64.45 Aligned_cols=172 Identities=13% Similarity=-0.048 Sum_probs=85.2
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHH---HH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP---LI 165 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~---~~ 165 (532)
.++.++..+......+.+..+.+++.+++-..+. .......+.+...+..++...+--+...|....++..+ ..
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~---~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~i 96 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN---SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAI 96 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444555667777778888888754222 33444444444444444444444433322222222222 12
Q ss_pred HHHHHHHhh---------hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHh----
Q 009536 166 LGAIISAQA---------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL---- 232 (532)
Q Consensus 166 ~~~~~~~~a---------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~---- 232 (532)
+..+.+.++ ..|...++.-.+.|++.|......+...++ +|++.-+..+ .|.++++++..++
T Consensus 97 l~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm----~G~a~aG~l~Sl~~i~t 171 (406)
T KOG1479|consen 97 LFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM----SGQALAGTLTSLLRILT 171 (406)
T ss_pred HHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH----hcchhHhHHHHHHHHHH
Confidence 222222222 245666677788888888887777766554 5655433222 3333333333222
Q ss_pred cCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccCh
Q 009536 233 GIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (532)
Q Consensus 233 ~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p 268 (532)
-....+...+=..-|.+..++.+++.++...+++.|
T Consensus 172 ka~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 172 KAAFSDSRTSALIYFITSTVILLLCFVLYLVLPKLP 207 (406)
T ss_pred HHhcCCCCceeehhHHHHHHHHHHHHHHHHHhhcch
Confidence 222222222133445555666666666666666655
No 263
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.08 E-value=0.00018 Score=66.30 Aligned_cols=154 Identities=13% Similarity=0.062 Sum_probs=89.5
Q ss_pred HHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHH
Q 009536 351 LTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTL 428 (532)
Q Consensus 351 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (532)
..+++.|.. +....+....+...+...+.|.+.||+|||+..+...++.+++++..-. .+....++.=+
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~---------~~~~~L~~GRv 129 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS---------SNYPVLLLGRV 129 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc---------cccHHHHHHHH
Confidence 344566766 4556666666777788889999999999999988888888888765433 11111222112
Q ss_pred HHHHHHhcccccccccccccc----cCccccchhHHHHHHH-HHHHHHHHHHHHHHHHHhhCc--chhhHhHHHHHHHHH
Q 009536 429 FYIFTFAIGAGPVTGLVIPEL----SSNRTRGKIMGFSFSV-HWVCNFLVGLFFLDLVETFGV--APVYAGFGGVSLLSA 501 (532)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~-~~~g~~i~~~~~g~l~~~~g~--~~~~~~~~~~~~~~~ 501 (532)
+.+.....-...--..++.|. +|++..+...+...+. +.+..+++..+...+.+..|. ..+|.....+.+++.
T Consensus 130 lgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~ 209 (354)
T PF05631_consen 130 LGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAA 209 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 222111111111111233333 4555555555555422 334445555566666676654 678888888888777
Q ss_pred HhhheeeccCCC
Q 009536 502 LFAYYFIVETKG 513 (532)
Q Consensus 502 ~~~~~~~~~~~~ 513 (532)
++.....+|..+
T Consensus 210 ~~I~~~W~ENyg 221 (354)
T PF05631_consen 210 VLILKTWPENYG 221 (354)
T ss_pred HHHHhcccccCC
Confidence 776666666543
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.05 E-value=0.0017 Score=62.10 Aligned_cols=151 Identities=11% Similarity=-0.016 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCC-CChhHHHHHHHHHHH-HHHHHHHhhhccccccchhHHHHHhhH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~l-~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
.++.++.+.+..++..+..+. +-.+.+.+.+. .++..+.++=+...+ +..+..++.+++.+++.+.+++-+-+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~----lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNL----LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 344455555555555555543 44555655543 245566777777777 667889999999999999999988888
Q ss_pred HHHHHHHHHHhh---------hc-----------------------HHHHHHHHHHHhhhhhhhhh-hhhHhhhhcCCcc
Q 009536 163 PLILGAIISAQA---------HS-----------------------LDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTK 209 (532)
Q Consensus 163 ~~~~~~~~~~~a---------~~-----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~ 209 (532)
.+....+++++. ++ .|...+.-...-+-...... .-.....|.+..+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 887777777753 11 02222222333333333333 3455678889989
Q ss_pred cccchhhHhHHHHHHHHHHHHHhcCCCCCC
Q 009536 210 YRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (532)
Q Consensus 210 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 239 (532)
|-.|..++++.+.+++..++..+..++..+
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999988888764
No 265
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.01 E-value=0.0014 Score=64.47 Aligned_cols=150 Identities=15% Similarity=0.065 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCC-CChhHHHHHHHHHHH-HHHHHHHhhhccccccchhHHHHHhhH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTFQIDTI 162 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~l-~~~~~~~~~G~l~dr~Grr~~l~~~~~ 162 (532)
.++.++.+.+..|+..+..+.. -.+.+.+=++ .++..+.++=....+ ...+...+..++++++++.+++-+...
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~l----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~ 97 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTIL----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIII 97 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4445666666666666655432 2222222110 133344455443333 344567788999999999998887777
Q ss_pred HHHHHHHHHHhh---------hc----------------------HHHHHHHHHHHhhhhhhhhh-hhhHhhhhcCCccc
Q 009536 163 PLILGAIISAQA---------HS----------------------LDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTKY 210 (532)
Q Consensus 163 ~~~~~~~~~~~a---------~~----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~ 210 (532)
.+.....++++. ++ .|.+.+.-++.-+-...... .-..+..|.++.+|
T Consensus 98 ~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e 177 (491)
T PF03219_consen 98 PFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE 177 (491)
T ss_pred HHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 776666666542 11 11222222333333333333 45778899999999
Q ss_pred ccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 211 RGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 211 r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
-.|..++++.+.++|.++++.+..++.+
T Consensus 178 AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 178 AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777766
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.01 E-value=0.00022 Score=69.53 Aligned_cols=114 Identities=16% Similarity=0.132 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhcCCc-hhhhhhHHHHHHHHHHHHHHhcCCCCcc---chhhHHHHHHHHHHHHHhcc
Q 009536 362 ALASLLVGVTNFAGALCASYLMDKEGRQ-KLLIGSYLGMAISMLLVVGATSLPLDED---FSHNLSILGTLFYIFTFAIG 437 (532)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 437 (532)
-.....+.++..+|+.+..+.. ..++| +.+.+..+.=.+.+.++.++ ....... .-...+...+..+..++..|
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lc-n~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLC-NYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHh-cCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 3455667899999998665431 11222 12222222222322232222 2111000 00122223333444555555
Q ss_pred c-ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHH
Q 009536 438 A-GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 477 (532)
Q Consensus 438 ~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 477 (532)
. ......+..+..++++|..+..+...+..+|-.+|..+.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 355556677778888898888888888888887776553
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.00 E-value=0.00031 Score=71.98 Aligned_cols=149 Identities=10% Similarity=0.063 Sum_probs=95.5
Q ss_pred cCCChh--HHHHHHHHHHHHHHhhhhHhhhhh-cCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHH
Q 009536 356 VGITDG--ALASLLVGVTNFAGALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIF 432 (532)
Q Consensus 356 ~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (532)
.+.++. ......+....-+..+++|++.|+ +|+++.+.++.++..++..++.+... +....... .......+...
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~~~~~~-~~~~l~gLaLi 95 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSSGHPLH-DLLDLLGLALI 95 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-cccccchH-HHHHHHHHHHH
Confidence 455433 333334444455667788999996 79999999999988888877765321 10000011 11122222233
Q ss_pred HHhcc-cccccccccccccCcc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHhh-------CcchhhHhHHHHHHHHH
Q 009536 433 TFAIG-AGPVTGLVIPELSSNR---TRGKIMGFSFSVHWVCNFLVGLFFLDLVETF-------GVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 433 ~~~~~-~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~-------g~~~~~~~~~~~~~~~~ 501 (532)
..+.+ .-|...+...|.++++ .+-+.+.+.....++|+.+++.+.+++.+.. +|...|.+.+++.+++.
T Consensus 96 a~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 96 ALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL 175 (654)
T ss_pred HhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence 33333 3466667777777643 3677888899999999999999999887553 47778888877777776
Q ss_pred Hhhhe
Q 009536 502 LFAYY 506 (532)
Q Consensus 502 ~~~~~ 506 (532)
++...
T Consensus 176 lvf~~ 180 (654)
T TIGR00926 176 IVFMA 180 (654)
T ss_pred HHHHH
Confidence 66544
No 268
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.99 E-value=9.4e-05 Score=71.45 Aligned_cols=108 Identities=17% Similarity=0.164 Sum_probs=88.6
Q ss_pred HHHHHhhHHHHHHHHHHHhhh---c------HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcc---cccchhhHhHHHH
Q 009536 155 RTFQIDTIPLILGAIISAQAH---S------LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK---YRGSLGTLCQVGT 222 (532)
Q Consensus 155 ~~l~~~~~~~~~~~~~~~~a~---~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 222 (532)
+++++|.++..+|.++..++. + .+.++++-++.++|.|+.-+....+++|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888889999988855442 2 357889999999999999999999999999866 3567888899999
Q ss_pred HHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcc
Q 009536 223 CLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (532)
Q Consensus 223 ~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 263 (532)
++|..++..+.+++.+..+ |.+.|.+.++..++.++..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999998888 999999988887776665544
No 269
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.62 E-value=0.00052 Score=65.04 Aligned_cols=111 Identities=23% Similarity=0.179 Sum_probs=82.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH-----HHHHHHHhhhcHHHHHHHHHHHhhhhhhhhh
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI-----LGAIISAQAHSLDEMLWGRFLVGLGIGVNTV 196 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~-----~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~ 196 (532)
...+..+...+|.+|-.++.--...+ |+ |++.+...+-.. +.....-+.++.|.+++.-+..|+..|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 45577788888888877764432221 33 444444333222 2222233457899999999999999999999
Q ss_pred hhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCC
Q 009536 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (532)
Q Consensus 197 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 236 (532)
.....+.|-.++++|..+++..+.+.++|.+++.+++-.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887544
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.50 E-value=0.0011 Score=65.25 Aligned_cols=151 Identities=20% Similarity=0.290 Sum_probs=93.1
Q ss_pred HHHcCCChhHHHHHHHHHHHH--HHhhhhHhhhhhc-----CCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHH
Q 009536 353 FQDVGITDGALASLLVGVTNF--AGALCASYLMDKE-----GRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSIL 425 (532)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~l~d~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (532)
.++.+.+.+. ......+..+ ...++.|.++|-+ .||..++++.++..++...+...+.. .......
T Consensus 17 ~~~l~ls~~~-~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~------~~s~~~~ 89 (433)
T PF03092_consen 17 KDDLGLSPAQ-LQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS------ESSAAIA 89 (433)
T ss_pred HHHcCCCHHH-HHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc------cchhhhH
Confidence 3456666442 2223333333 4467889999986 34455566666665555555553221 1122222
Q ss_pred HHHHHHHHHhcccc-ccccccccccc---CccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHH
Q 009536 426 GTLFYIFTFAIGAG-PVTGLVIPELS---SNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 426 ~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (532)
..+++...++.... .+..++..|.. |.+ +|...+.......+|+.++..+.|.+.+..+++..|.+.+.+..+..
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 22333333333322 33445555655 444 78888999999999999999999999999999999988888777776
Q ss_pred HhhheeeccC
Q 009536 502 LFAYYFIVET 511 (532)
Q Consensus 502 ~~~~~~~~~~ 511 (532)
+..++..+|+
T Consensus 169 ~~~~~~~~e~ 178 (433)
T PF03092_consen 169 IVALFLLEER 178 (433)
T ss_pred HHHHHhhhhc
Confidence 6666666653
No 271
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.37 E-value=0.0013 Score=46.47 Aligned_cols=66 Identities=21% Similarity=0.326 Sum_probs=52.6
Q ss_pred HHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHH
Q 009536 333 LFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLG 398 (532)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 398 (532)
...+..++.......|.+.++++.|.+ +.+....+..+..+++.++.|+++||+++++........
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 334455667777888899999888877 558888888899999999999999999999887655443
No 272
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.28 E-value=0.0071 Score=49.42 Aligned_cols=109 Identities=16% Similarity=0.105 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccccccc
Q 009536 363 LASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVT 442 (532)
Q Consensus 363 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (532)
....+......+..++.+.+.+++|.|+.++++.++..+-...... .+.+..+....+.+.+. ...+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~---------~~~~~l~~~s~l~G~~~-a~lW~aq 110 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY---------PNSYTLYPASALLGFGA-ALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHHhhhh-HHhhHhh
Confidence 3444555667777888899999999999999988877755554433 12222222222222222 2234555
Q ss_pred ccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 443 GLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV 481 (532)
Q Consensus 443 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 481 (532)
..++.+...++.+++..++...+.+.+.++|..+.-.+.
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788888889999999999998888888776655443
No 273
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.28 E-value=0.0058 Score=53.61 Aligned_cols=55 Identities=20% Similarity=0.167 Sum_probs=37.0
Q ss_pred ccccchhhHhHHHHHHHHHHHHHhcCCCCC-----CcchhHHHHHhhHHHHHHHHHHhccc
Q 009536 209 KYRGSLGTLCQVGTCLGIITSLFLGIPAED-----DPHWWRTMLYIASLPGFILALGMQFT 264 (532)
Q Consensus 209 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~ 264 (532)
|+|+..+.+...+.++|.++.-..--.-.+ ... |++.+.+.+++.++-+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~-W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNN-WQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 567888888888899998776544222211 123 9999999888877666655544
No 274
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.26 E-value=0.0048 Score=58.47 Aligned_cols=135 Identities=12% Similarity=0.014 Sum_probs=84.0
Q ss_pred hhhHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhh
Q 009536 342 INGVLYFSSLTFQDVGITDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHN 421 (532)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (532)
+..+..+...++. +.+.+-+...++.+..++..+.+.|+.||+|-|....++..+.+++..+=..... +.- .+.
T Consensus 64 ya~i~n~~~~~Yg--s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~-p~v---~~~ 137 (480)
T KOG2563|consen 64 YAPINNYVNSFYG--SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSL-PFV---PPL 137 (480)
T ss_pred ehhHHHHHHHHhc--chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccC-ccc---ccc
Confidence 3444444444433 2334467777888899999999999999999999999999998888776443211 100 111
Q ss_pred HHHHHHHHHHHHHhccccccc----ccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009536 422 LSILGTLFYIFTFAIGAGPVT----GLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET 483 (532)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 483 (532)
... .+...+........+.. .-...--+|+++|+++..+..+.+.+|.+++-.+-..+..+
T Consensus 138 f~~-~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 138 FRR-PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred chh-hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 111 11111111111111111 12233457999999999999999999999888877766644
No 275
>PRK03612 spermidine synthase; Provisional
Probab=97.17 E-value=0.011 Score=59.30 Aligned_cols=135 Identities=18% Similarity=0.078 Sum_probs=80.9
Q ss_pred HHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHH---HHHHHH----HhhhcH-HHHHHHHH
Q 009536 114 AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI---LGAIIS----AQAHSL-DEMLWGRF 185 (532)
Q Consensus 114 ~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~---~~~~~~----~~a~~~-~~l~~~r~ 185 (532)
.--+|- +....+.+.++|++|.++|+.+++++.++.-++.. .+-+.+.. +...+. ++...+ ..++..-+
T Consensus 42 ~~~~G~--s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 118 (521)
T PRK03612 42 SYLLGD--SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVL 118 (521)
T ss_pred HHHhCc--hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344565 77788999999999999999999988744333322 11111111 111111 111111 12234456
Q ss_pred HHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC-CcchhHHHHHhhHH
Q 009536 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-DPHWWRTMLYIASL 252 (532)
Q Consensus 186 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~wr~~f~~~~~ 252 (532)
+.|+..|+..|....+..+... ++-++..|-......+|.++|.++.+++.- ..|..+..+.+..+
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 6788888888887776655332 224667788888888999999888776643 45535555544433
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.08 E-value=0.014 Score=56.65 Aligned_cols=148 Identities=19% Similarity=0.163 Sum_probs=107.7
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
+++..++..+-++..-.+...+..+...-|+ ++..+|..-+.-.+....+.+...++.+|+|..+.=++++..-.+..
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~--s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGY--SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 4455555444454444456666666666688 99999999999999999999999999999999888777776554444
Q ss_pred HHHHh---h---h----cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 169 IISAQ---A---H----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 169 ~~~~~---a---~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
.++.. . + +...++.+-.+.=+|.=....+..-++.|..|+++||...|.-....++--++...++-.+.+
T Consensus 338 ~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 338 ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 43332 1 2 333444444555555556677777899999999999999999999888888888777665544
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.01 E-value=0.015 Score=57.04 Aligned_cols=108 Identities=8% Similarity=-0.107 Sum_probs=70.8
Q ss_pred HHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccch-----------------------hhHHHHHHHHH
Q 009536 374 AGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFS-----------------------HNLSILGTLFY 430 (532)
Q Consensus 374 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 430 (532)
+..++.+++++|++|++++..........++++.+... +..+..+ ..+......+.
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~-p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~ 137 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIY-PLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVM 137 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHh-cchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHH
Confidence 33778899999999999887766666555555544321 1000000 01111222222
Q ss_pred HHHHhccccc-ccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 431 IFTFAIGAGP-VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 482 (532)
Q Consensus 431 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 482 (532)
.-.++....+ +.+..++|.+..++..+-+++....+++|..+++.+..++.+
T Consensus 138 ~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 138 AELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333333333 667889999999999999999999999999999999888763
No 278
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.69 E-value=0.023 Score=57.97 Aligned_cols=181 Identities=14% Similarity=0.040 Sum_probs=115.8
Q ss_pred HHHHHHHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHH
Q 009536 330 GGALFLLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVV 407 (532)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 407 (532)
...+..+.+......+....+.+-+.++.. +.++....+-++..+......+...|..|-+.+-++.++++++.++..
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~a 180 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFA 180 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHh
Confidence 333333333333344444444444445544 456666777788888888889999999999999999999999888876
Q ss_pred HHhcCC---------------CC----------------------c---cchhhHHHHHHHHHHHHHhccc---cccccc
Q 009536 408 GATSLP---------------LD----------------------E---DFSHNLSILGTLFYIFTFAIGA---GPVTGL 444 (532)
Q Consensus 408 ~~~~~~---------------~~----------------------~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 444 (532)
+--.+. .. . ...+...++.+++.....++|. .++..+
T Consensus 181 lPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGis 260 (735)
T KOG3626|consen 181 LPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGIS 260 (735)
T ss_pred ChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCc
Confidence 531000 00 0 0112222333333333334443 466778
Q ss_pred ccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh------------------hC-cchhhHhHHHHHHHHHHhhh
Q 009536 445 VIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVET------------------FG-VAPVYAGFGGVSLLSALFAY 505 (532)
Q Consensus 445 ~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~------------------~g-~~~~~~~~~~~~~~~~~~~~ 505 (532)
|+.|...+++.....|+..++.-+|-++|-.+++.+... .| |+..|++.+++.++..+..+
T Consensus 261 YiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f 340 (735)
T KOG3626|consen 261 YIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF 340 (735)
T ss_pred cccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888888776532 12 55667777777777776664
Q ss_pred eeeccC
Q 009536 506 YFIVET 511 (532)
Q Consensus 506 ~~~~~~ 511 (532)
+ .|+.
T Consensus 341 ~-fPk~ 345 (735)
T KOG3626|consen 341 F-FPKE 345 (735)
T ss_pred h-Cccc
Confidence 4 4443
No 279
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.46 E-value=0.11 Score=47.25 Aligned_cols=73 Identities=14% Similarity=0.162 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCC
Q 009536 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAP 207 (532)
Q Consensus 134 ~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 207 (532)
.+..+.++++.+.+..++|.|..++++.......- ..=+-+.+..++..-.+.|++.+..+..--+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 44555666777789999999999988877765422 22233678889999999999999998888777766543
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.45 E-value=0.0092 Score=57.66 Aligned_cols=119 Identities=8% Similarity=-0.003 Sum_probs=77.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhccc-ccccccccccccCcc---ccchhHHHHHHH
Q 009536 390 KLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGA-GPVTGLVIPELSSNR---TRGKIMGFSFSV 465 (532)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~g~~~~~ 465 (532)
+.+.++.++..++.+++.+........... ....+.+.+.....+.|. =|....+..|.++++ ++.+.+..++..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~-~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGI-QLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC-------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhH-HHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 456778888888888865543322111111 112222222233333333 366777788888654 466778888999
Q ss_pred HHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHhhheeec
Q 009536 466 HWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALFAYYFIV 509 (532)
Q Consensus 466 ~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (532)
.++|..++..+.+++.++.||...|.+.++..+++.++.+.-.+
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999988888888776655433
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.44 E-value=0.00064 Score=63.52 Aligned_cols=113 Identities=17% Similarity=0.080 Sum_probs=2.5
Q ss_pred HHHHHHHHHHHHhhhhHhhhhhc-CCchhhhhhHHHHHHHHHHHHHHhcCCC---CccchhhHHHHHHHHHHHHHhccc-
Q 009536 364 ASLLVGVTNFAGALCASYLMDKE-GRQKLLIGSYLGMAISMLLVVGATSLPL---DEDFSHNLSILGTLFYIFTFAIGA- 438 (532)
Q Consensus 364 ~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~- 438 (532)
.+..+.++..+|+.+.++..-+. .+|++.. ..+.=.+.+.++..+...+. .+..-...+...+..+..++..|.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45567899999999888743221 2333332 22222222222222111110 000111122233344455555555
Q ss_pred ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHH
Q 009536 439 GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 477 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 477 (532)
.+....+..+..+++.|..+..+......+|-.+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667778888888888888888777777777776543
No 282
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.30 E-value=0.13 Score=47.75 Aligned_cols=142 Identities=21% Similarity=0.143 Sum_probs=85.5
Q ss_pred HhHHHHHHHcCCC----hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhH
Q 009536 347 YFSSLTFQDVGIT----DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNL 422 (532)
Q Consensus 347 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (532)
...+.+..+.+.. ..++......+...++.++.|++.||.|||+.+..+.....++.+...+.. ....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 94 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP--------NVGL 94 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--------cchH
Confidence 3444444454433 346677777788888889999999999999777766655344433333311 1112
Q ss_pred HHHHHHHHHHHHhcc-cccccccccccccCc-cccchhHHHHHH-HHHHHHHHHHHHHHHHHHh--hCcchhhHhHHHH
Q 009536 423 SILGTLFYIFTFAIG-AGPVTGLVIPELSSN-RTRGKIMGFSFS-VHWVCNFLVGLFFLDLVET--FGVAPVYAGFGGV 496 (532)
Q Consensus 423 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~~g~~i~~~~~g~l~~~--~g~~~~~~~~~~~ 496 (532)
..........+.+.+ ..+....+..|..|. +.++...+.... ...++..+++.+.+.+... .+|+..+......
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 222222222233332 346677788888887 568888888888 5777888888777766654 3455544444333
No 283
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.21 E-value=0.0013 Score=66.21 Aligned_cols=167 Identities=17% Similarity=0.061 Sum_probs=1.1
Q ss_pred hhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCC-----
Q 009536 342 INGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPL----- 414 (532)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 414 (532)
.......++.+-++++.+ +.++.....-++.++..++..++.+|..|-+.+-.+.++++++.+++.+-.....
T Consensus 19 ~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 19 SGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 333334444554555554 5688888888999999999999999988888888888888888877754211100
Q ss_pred ---------------C------------------ccchhhHHHHHHHHHHHHHhccc---ccccccccccccCccccchh
Q 009536 415 ---------------D------------------EDFSHNLSILGTLFYIFTFAIGA---GPVTGLVIPELSSNRTRGKI 458 (532)
Q Consensus 415 ---------------~------------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 458 (532)
. ...........+++.....+.|. .++..+|+.|.++++..+..
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splY 178 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLY 178 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccc
Confidence 0 00011111222222222333333 36777899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---------------------hC-cchhhHhHHHHHHHHHHhhheee
Q 009536 459 MGFSFSVHWVCNFLVGLFFLDLVET---------------------FG-VAPVYAGFGGVSLLSALFAYYFI 508 (532)
Q Consensus 459 ~g~~~~~~~~g~~i~~~~~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~~ 508 (532)
.|+......+|.++|-.+++...+. .| |...|++.+.+.++..+....+-
T Consensus 179 iGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FP 250 (539)
T PF03137_consen 179 IGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFP 250 (539)
T ss_dssp ------------------------------------------------------------------------
T ss_pred hhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999888887777655421 12 55556666666666665554443
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.11 E-value=0.15 Score=48.82 Aligned_cols=123 Identities=18% Similarity=0.089 Sum_probs=78.9
Q ss_pred HHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCCccchhhHHHHHHHHHHHHHhcccccccccccccccC
Q 009536 372 NFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLDEDFSHNLSILGTLFYIFTFAIGAGPVTGLVIPELSS 451 (532)
Q Consensus 372 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (532)
.+...+....+.|.++.|++++++.+...+...++.+. ......-+.-+..+...+.-.+.++++=...|
T Consensus 54 yl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~----------~sv~~mq~~q~~yg~~~a~evay~sYiys~v~ 123 (412)
T PF01770_consen 54 YLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG----------TSVLAMQLMQFFYGLATAAEVAYYSYIYSVVD 123 (412)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH----------CcHHHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 44455667889999999999999888877777776662 22222222222223333333445566666778
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC--cchhhHhHHHHHHHHHHhh
Q 009536 452 NRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG--VAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 452 ~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~ 504 (532)
+++--++.+......-+|..++..++..+....+ +.....+..+...++.++.
T Consensus 124 ~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~ 178 (412)
T PF01770_consen 124 KEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIA 178 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999888988888888877766433 4444444444444444443
No 285
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.01 E-value=0.34 Score=47.30 Aligned_cols=145 Identities=17% Similarity=0.158 Sum_probs=95.1
Q ss_pred HHHHHHHhhhhhhccccccchhHH---HHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcccc---ccchhHHHHHhhH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVS---IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD---KLGCRRTFQIDTI 162 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~d---r~Grr~~l~~~~~ 162 (532)
++++....+..++..+......|. .....+.+ +....+...-...++..+++.+.+.+++ ++||++.+.++..
T Consensus 242 ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n-~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~ 320 (461)
T KOG3098|consen 242 MLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSN-TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGII 320 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCc-chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHH
Confidence 344444445555555444444432 22222321 2222333333344444555566666664 5799999999999
Q ss_pred HHHHHHHHHHhh------------------hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHH
Q 009536 163 PLILGAIISAQA------------------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL 224 (532)
Q Consensus 163 ~~~~~~~~~~~a------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 224 (532)
+..++.++.-.. +++...++.-++.|++-+......+.++.+.+ +++|..+.++...-..+
T Consensus 321 ~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~ 399 (461)
T KOG3098|consen 321 IHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSV 399 (461)
T ss_pred HHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHH
Confidence 888888777653 24666778889999999999999999999999 55589999999888888
Q ss_pred HHHHHHHhcCC
Q 009536 225 GIITSLFLGIP 235 (532)
Q Consensus 225 g~~~g~~~~~~ 235 (532)
+..++......
T Consensus 400 ~s~v~~f~~~~ 410 (461)
T KOG3098|consen 400 ASCVAFFFSPY 410 (461)
T ss_pred HHHHHhhhhhh
Confidence 88777665443
No 286
>PRK03612 spermidine synthase; Provisional
Probab=95.42 E-value=0.19 Score=50.61 Aligned_cols=50 Identities=24% Similarity=0.304 Sum_probs=36.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHH-hhCcchhhHhHHHHHHHHHHhh
Q 009536 455 RGKIMGFSFSVHWVCNFLVGLFFLDLVE-TFGVAPVYAGFGGVSLLSALFA 504 (532)
Q Consensus 455 ~~~~~g~~~~~~~~g~~i~~~~~g~l~~-~~g~~~~~~~~~~~~~~~~~~~ 504 (532)
.+...|-.+....+|+++|+.+.+.+.- ..|.....++.+.+.++.+++.
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 5677888888999999999999987764 6776666666665555544433
No 287
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.19 E-value=0.19 Score=49.29 Aligned_cols=107 Identities=11% Similarity=0.014 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccchh--HHHH--HhhHHHHHHHHHHHhh---------hcHHHHHHHHHHHhhhhh
Q 009536 126 EGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQ--IDTIPLILGAIISAQA---------HSLDEMLWGRFLVGLGIG 192 (532)
Q Consensus 126 ~~~~~s~~~l~~~~~~~~~G~l~dr~Grr--~~l~--~~~~~~~~~~~~~~~a---------~~~~~l~~~r~l~G~~~g 192 (532)
.-+....|.++-.+|..+..+.. .-++| ++++ +.-+++.-..++|..- ++-+..++.-++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34566777777778777554431 11222 3332 2233344444444322 456667788999999999
Q ss_pred hhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhc
Q 009536 193 VNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (532)
Q Consensus 193 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 233 (532)
-....+..+..+..+++||..+..+...+..+|..+|..++
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888775
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.86 E-value=0.017 Score=51.79 Aligned_cols=138 Identities=13% Similarity=0.080 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhc
Q 009536 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEV 205 (532)
Q Consensus 126 ~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 205 (532)
.|.+.-+-.+...+..+......||+---.=..+..++.+.+.++.+++++.++=+.+-.+..++.|.....-.++- ..
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-cc
Confidence 35555555666667777778888886543334555667778888889999999999998888888887666655543 33
Q ss_pred CCcccccchhhHhHHHHHHHHHHHHHhcCCCCC--CcchhHHHHHhhHHHHHHHHHHhcccccChh
Q 009536 206 APTKYRGSLGTLCQVGTCLGIITSLFLGIPAED--DPHWWRTMLYIASLPGFILALGMQFTVESPR 269 (532)
Q Consensus 206 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~~~wr~~f~~~~~~~~~~~~~~~~~~~~p~ 269 (532)
+++. ..+-+..|.+.+.++|..--..+.+ ... -|.+.++...+-++.+...+++.++|+
T Consensus 143 Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~s-pk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 143 YPSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLS-PKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred CCCc----eeccccCCCCcchhhhhhHHHHHhhhcCCC-hhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 3332 4444555555555666544444443 122 677777777776666666666555543
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.79 E-value=0.3 Score=34.98 Aligned_cols=65 Identities=20% Similarity=0.129 Sum_probs=54.3
Q ss_pred hHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHH
Q 009536 344 GVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVG 408 (532)
Q Consensus 344 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 408 (532)
.+...+|.+.++.+.+ +.++......++.++|.+...++.++.++++.+..+.+...+..+.+.+
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 3455678888877666 6688889999999999999999999988888888888888888888777
No 290
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.84 E-value=0.78 Score=43.04 Aligned_cols=140 Identities=19% Similarity=0.118 Sum_probs=65.3
Q ss_pred HHhhhcchhhHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHHhhhhHhhhh-----hcCCchhhhh-hHHHHHHHHHHH
Q 009536 335 LLQQFAGINGVLYFSSLTFQDVGIT--DGALASLLVGVTNFAGALCASYLMD-----KEGRQKLLIG-SYLGMAISMLLV 406 (532)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d-----~~g~~~~~~~-~~~~~~~~~~~~ 406 (532)
...+...+.... -.|.+++..+.+ +.+.....+ .-..--++...+.| |+|||+..++ ...+.+..+.++
T Consensus 40 YllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllL 116 (510)
T KOG3574|consen 40 YLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLL 116 (510)
T ss_pred HHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHH
Confidence 334444444443 778888755544 222222211 11122346667777 8999986543 333333334444
Q ss_pred HHHhcCCCC-ccchhhHHHHHHHHHHHHHhcccc-cccccccccccCccccchhHHHHHHHHHHHHHHHHHHH
Q 009536 407 VGATSLPLD-EDFSHNLSILGTLFYIFTFAIGAG-PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFF 477 (532)
Q Consensus 407 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 477 (532)
.....-... ....+...+....++..-+..+.. .....+.-.+..+++.|-+........+.|.+++-.++
T Consensus 117 s~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 117 SYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 332222221 122222332222222233322222 22334444555666677777666666666666665544
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.82 E-value=1.9 Score=44.00 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhhhHhhhhh-cCCchhhhhhHHHHHHHHHHHHHHhcCCCCc--------------c-chhhHHHHHHHHH
Q 009536 367 LVGVTNFAGALCASYLMDK-EGRQKLLIGSYLGMAISMLLVVGATSLPLDE--------------D-FSHNLSILGTLFY 430 (532)
Q Consensus 367 ~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~ 430 (532)
..........+++++++|. +||.+.+.++.++..++..++......+... . ......++...+.
T Consensus 81 ~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~ 160 (571)
T KOG1237|consen 81 AFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALY 160 (571)
T ss_pred HHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHH
Confidence 3344445566788999997 5888888888888888876665543222110 0 0001112222222
Q ss_pred HHHHhc-ccccccccccccccC----cccc--chhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHHHHh
Q 009536 431 IFTFAI-GAGPVTGLVIPELSS----NRTR--GKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLSALF 503 (532)
Q Consensus 431 ~~~~~~-~~~~~~~~~~~~~~~----~~~~--~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 503 (532)
....+. +.-|.....-+|.++ .+.+ ..-+.......+.|..++-.+..++.+..||...|.+..++.+++.++
T Consensus 161 lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 161 LIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred HheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHH
Confidence 222222 223666677777776 2222 366777777888899999888888888999999888888777776665
Q ss_pred hh
Q 009536 504 AY 505 (532)
Q Consensus 504 ~~ 505 (532)
.+
T Consensus 241 F~ 242 (571)
T KOG1237|consen 241 FL 242 (571)
T ss_pred HH
Confidence 44
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.20 E-value=0.028 Score=52.59 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHhhhccccc-cchhHHHHH--hhHHHHHHHHHHH----------hhhcHHHHHHHHHHHhhhhhhhh
Q 009536 129 VVSIFIAGAFVGSISSGSLADK-LGCRRTFQI--DTIPLILGAIISA----------QAHSLDEMLWGRFLVGLGIGVNT 195 (532)
Q Consensus 129 ~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~--~~~~~~~~~~~~~----------~a~~~~~l~~~r~l~G~~~g~~~ 195 (532)
...+|.++-.+|..+.++.-=+ -.+|++++. .-+++.-..++|- +.+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567788888888877653211 134444433 2233333333331 22455667888999999999999
Q ss_pred hhhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCC
Q 009536 196 VLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (532)
Q Consensus 196 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 235 (532)
..+..+..+..++++|..+-.+......+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888888888877643
No 293
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.70 E-value=0.088 Score=50.32 Aligned_cols=131 Identities=10% Similarity=-0.078 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcC
Q 009536 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (532)
Q Consensus 127 ~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 206 (532)
.|-..++.+...+.+....++.||+|-|+.+..+...+.++..+.++.++.+....-|-..|+-.+....+.+..++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 46677788888899999999999999888888888878888888888888888888888888666655555555444332
Q ss_pred Cc-----------------------ccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHH
Q 009536 207 PT-----------------------KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (532)
Q Consensus 207 ~~-----------------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 257 (532)
-. ..+|...|+.+....+..++..+..|.+.+..|+=+.+-.+.+..++..
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~ 488 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLI 488 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHH
Confidence 11 2246677778888888888877777777776665555555544444443
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.29 E-value=0.47 Score=44.19 Aligned_cols=165 Identities=10% Similarity=-0.050 Sum_probs=90.8
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
.+.+.+++++.....-+..........+++-+ +-...+.-...-.....+..++.|...|+..|+|++...+.+.-++.
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gn-sl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv 107 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGN-SLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSV 107 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCc-eehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHH
Confidence 45566777777777777766666666666541 22222333333344556777888999999999999988777654443
Q ss_pred HHHH------hh------hcHHHHHHHHHHHhhhhhhhh--hhhhH--hhhhcC----Ccccc---cchhhHhHHHHHHH
Q 009536 169 IISA------QA------HSLDEMLWGRFLVGLGIGVNT--VLVPI--YISEVA----PTKYR---GSLGTLCQVGTCLG 225 (532)
Q Consensus 169 ~~~~------~a------~~~~~l~~~r~l~G~~~g~~~--~~~~~--~i~~~~----~~~~r---~~~~~~~~~~~~~g 225 (532)
.+++ +. .+++.+..+-++.-.-.+... ..+.+ +-.||. ..+.+ .+..+..-..-..-
T Consensus 108 ~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~t 187 (503)
T KOG2601|consen 108 IVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQST 187 (503)
T ss_pred HHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhh
Confidence 3333 21 355555555444332222111 11111 112332 12223 23335555556667
Q ss_pred HHHHHHhcCCCCCCcchhHHHHHhhHHHHH
Q 009536 226 IITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (532)
Q Consensus 226 ~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~ 255 (532)
.++.|.+.|.+....+ -|..-.+.++..+
T Consensus 188 n~Lapv~tg~Iitfvs-l~~~~g~f~~w~~ 216 (503)
T KOG2601|consen 188 NLLAPVITGLIITFVS-LRASAGTFAAWAL 216 (503)
T ss_pred hchhhhhhcccceeec-hhhhhhhhHHHHH
Confidence 7888999888887666 5554444444333
No 295
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.37 E-value=6.1 Score=37.88 Aligned_cols=28 Identities=11% Similarity=-0.049 Sum_probs=12.3
Q ss_pred HHHHHHHHhhhcchhhHHHhHHHHHHHc
Q 009536 329 IGGALFLLQQFAGINGVLYFSSLTFQDV 356 (532)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (532)
+..++.........+.+..-.+++.++.
T Consensus 21 ~i~~llGiG~LlpWN~fiTa~~y~~~~~ 48 (406)
T KOG1479|consen 21 LIFLLLGIGTLLPWNMFITASDYYYYRF 48 (406)
T ss_pred HHHHHHhcccccchHhhhccHHHHHhhc
Confidence 3333333333334444444455555444
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.55 E-value=2.6 Score=41.95 Aligned_cols=110 Identities=9% Similarity=-0.090 Sum_probs=68.0
Q ss_pred HHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhcCCCC---ccch--------------------hhHHHHHHH
Q 009536 372 NFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATSLPLD---EDFS--------------------HNLSILGTL 428 (532)
Q Consensus 372 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------------~~~~~~~~~ 428 (532)
.++...+..++++++++.++.-+........+.++++.. +|.. ++.. ..|......
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 344456678999999999887665555555555544432 1110 0000 001111111
Q ss_pred HHHHHHhccccc-ccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 429 FYIFTFAIGAGP-VTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 482 (532)
Q Consensus 429 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 482 (532)
+..=.++....+ ..+..++|.+..++..+-+++.....++|..+++.+...+.+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222222 457788999999999999999999999999999998888777
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.69 E-value=1.6 Score=39.73 Aligned_cols=110 Identities=15% Similarity=0.056 Sum_probs=80.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccccccchhH------HHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhh
Q 009536 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRR------TFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTV 196 (532)
Q Consensus 123 ~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~------~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~ 196 (532)
+.|.-|....|.+|-.+ .+=+-|+=+-+ ++-.-.+++.+...+..+.++++..++.-+.-|+-.|..++
T Consensus 287 ~sqYRwyqvlYQlGVFi-----SRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 287 DSQYRWYQVLYQLGVFI-----SRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYV 361 (409)
T ss_pred hhcchhhheeeeeeEEE-----EeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHH
Confidence 44678988888886433 22222222222 12222334445555666789999999999999999999999
Q ss_pred hhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCC
Q 009536 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (532)
Q Consensus 197 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 237 (532)
...--+.+-.++++|-.+++...++.++|..++.+++-.+-
T Consensus 362 NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 362 NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 88888888888899999999999999999999998876553
No 298
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.79 E-value=7.4 Score=34.84 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccchh--HHHHHhhHHHHHHHHHHHh----hh---cHHHHHHHHHHHhhhhhhhhh
Q 009536 126 EGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIPLILGAIISAQ----AH---SLDEMLWGRFLVGLGIGVNTV 196 (532)
Q Consensus 126 ~~~~~s~~~l~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~----a~---~~~~l~~~r~l~G~~~g~~~~ 196 (532)
-|.+.+.|+++.++|+-+..++..|-.+| ..+.+..++.++...+..+ ++ +...=+++-++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48999999999999999998888876554 3444444444443333322 22 222234555556677889999
Q ss_pred hhhHhhhhcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHH
Q 009536 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (532)
Q Consensus 197 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 260 (532)
....+-+++.|+++|...+.++..-.++=..++-..- -..+....-|..|-++.....+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynl-h~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL-HVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec-ccccCccccchhhhhhHHHHHHHHHH
Confidence 9999999999999999998887654444333321110 01111111567777777666655443
No 299
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=87.48 E-value=25 Score=34.76 Aligned_cols=112 Identities=10% Similarity=-0.117 Sum_probs=70.1
Q ss_pred HHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHHHhc-----CCCCcc--------ch-h---------hHHHHHH
Q 009536 371 TNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVGATS-----LPLDED--------FS-H---------NLSILGT 427 (532)
Q Consensus 371 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--------~~-~---------~~~~~~~ 427 (532)
+.++..++..++.+++.+.++...........++++++... .+.+.. .+ . .|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 45666778889999999988877666666655555555422 111100 00 0 0111222
Q ss_pred HHHHHHHhcccc-cccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009536 428 LFYIFTFAIGAG-PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVE 482 (532)
Q Consensus 428 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 482 (532)
.+..=.++.... -+.+..++|....++..+-+++.+...+++..++..+..++.+
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222222222 2455678899999999999999999999999999988887765
No 300
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=85.11 E-value=25 Score=30.61 Aligned_cols=38 Identities=16% Similarity=-0.014 Sum_probs=19.5
Q ss_pred hcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCCCcc
Q 009536 204 EVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (532)
Q Consensus 204 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 241 (532)
++..++++.+.-.......-++.++|..+++.+.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333433333344445555566666666666655544
No 301
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=84.95 E-value=0.078 Score=46.36 Aligned_cols=66 Identities=12% Similarity=0.222 Sum_probs=44.6
Q ss_pred HHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhcc---------ccccchhHHH
Q 009536 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSL---------ADKLGCRRTF 157 (532)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l---------~dr~Grr~~l 157 (532)
+.-.++.+++..+.+..-..+-.+.++.++ ++....+++-+-...-++..++.|.. .||+|||+..
T Consensus 20 f~yGvGHmlNDitAScWFTYlllfltqigl--sp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 20 FAYGVGHMLNDITASCWFTYLLLFLTQIGL--SPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred eeechhHHHhhHHHHHHHHHHHHHHHHhcC--CcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 334455666666666665556666677777 66666677777777777888887754 4689998754
No 302
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=80.70 E-value=21 Score=31.59 Aligned_cols=34 Identities=12% Similarity=0.057 Sum_probs=23.1
Q ss_pred HHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHH
Q 009536 369 GVTNFAGALCASYLMDKEGRQKLLIGSYLGMAIS 402 (532)
Q Consensus 369 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 402 (532)
.+|..+..+.+-.++.|+..|++.+.+.+++.+.
T Consensus 250 ~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 250 ALCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 4555555555667888999888887776655444
No 303
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=80.33 E-value=21 Score=33.39 Aligned_cols=96 Identities=18% Similarity=0.172 Sum_probs=63.8
Q ss_pred chhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHH-----HHHHHhh----hcHH
Q 009536 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG-----AIISAQA----HSLD 178 (532)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~-----~~~~~~a----~~~~ 178 (532)
..+..+...+.- ..-.|.+.+.+.|..+..+|+...-++.|.--.-+.+..=+++..++ .+-..|+ ++-+
T Consensus 28 lal~tLatyLlG-~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~ 106 (508)
T COG4262 28 LALGTLATYLLG-GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRL 106 (508)
T ss_pred HHHHHHHHHhcC-CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHH
Confidence 344455555542 26678899999999999999999988888644433332222222211 1111233 3566
Q ss_pred HHHHHHHHHhhhhhhhhhhhhHhhhh
Q 009536 179 EMLWGRFLVGLGIGVNTVLVPIYISE 204 (532)
Q Consensus 179 ~l~~~r~l~G~~~g~~~~~~~~~i~~ 204 (532)
.+++.-++.|.-.|...|..+.++..
T Consensus 107 Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 107 VLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 78888899999999999999988876
No 304
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=73.65 E-value=76 Score=29.69 Aligned_cols=33 Identities=12% Similarity=0.062 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhh-HhhhhcCCcc
Q 009536 177 LDEMLWGRFLVGLGIGVNTVLVP-IYISEVAPTK 209 (532)
Q Consensus 177 ~~~l~~~r~l~G~~~g~~~~~~~-~~i~~~~~~~ 209 (532)
...-.+--.+++++.|...-++. -++.|....+
T Consensus 260 ~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 260 SSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34444555666777665543332 2344444433
No 305
>PRK10263 DNA translocase FtsK; Provisional
Probab=72.71 E-value=17 Score=40.40 Aligned_cols=23 Identities=9% Similarity=-0.086 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHhhCcchhh
Q 009536 468 VCNFLVGLFFLDLVETFGVAPVY 490 (532)
Q Consensus 468 ~g~~i~~~~~g~l~~~~g~~~~~ 490 (532)
.|+++|..+...+...+|.....
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~ 164 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGT 164 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHH
Confidence 35555555555555555543333
No 306
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=72.47 E-value=24 Score=31.64 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhhhccccc-cchhHHHH----HhhHHHHHHHHHHHh-h----hcHHHHHHHHHHHhhhhhhhhh
Q 009536 127 GLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQ----IDTIPLILGAIISAQ-A----HSLDEMLWGRFLVGLGIGVNTV 196 (532)
Q Consensus 127 ~~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-a----~~~~~l~~~r~l~G~~~g~~~~ 196 (532)
....-+|..|..+|.+..|++... +-||+.+. .+.+++.+..++... . .++..+++.-++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344556667777777888887764 45565444 334444444444211 1 1356678888888887655555
Q ss_pred hhhHhhhhcCCcccccchhhHhHHHHHHHHHH
Q 009536 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (532)
Q Consensus 197 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 228 (532)
+...+-.| ++...+.+.--.++..+++|.++
T Consensus 224 ViL~lPhE-yK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNLPHE-YKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhcChhh-hcCCCcceehhHHHHHHHHHHHH
Confidence 55433333 33333444444455566666544
No 307
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=71.98 E-value=32 Score=32.26 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=28.1
Q ss_pred ccccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH-HhhCcchhhHhHHHHHHHHH
Q 009536 439 GPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLV-ETFGVAPVYAGFGGVSLLSA 501 (532)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~-~~~g~~~~~~~~~~~~~~~~ 501 (532)
.|....+.... .+......+.....-++|+..+.....++. -..|....-.+.+.+.++++
T Consensus 123 iPL~mrml~~r--~a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aA 184 (508)
T COG4262 123 IPLLMRMLQRR--QAKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAA 184 (508)
T ss_pred hHHHHHHHHHH--HHHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Confidence 46655555441 111222333333446677777766666554 33443333333444444444
No 308
>COG3619 Predicted membrane protein [Function unknown]
Probab=71.77 E-value=70 Score=28.11 Aligned_cols=32 Identities=6% Similarity=0.070 Sum_probs=19.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhhccccccch
Q 009536 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGC 153 (532)
Q Consensus 122 ~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Gr 153 (532)
++....+......+...++......+..|..|
T Consensus 53 ~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 53 GDAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44445566666777777775555555555553
No 309
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=70.97 E-value=11 Score=30.42 Aligned_cols=41 Identities=10% Similarity=0.106 Sum_probs=29.8
Q ss_pred HHHhcccccccccccccccCccccchhHHHHHHHHHHHHHH
Q 009536 432 FTFAIGAGPVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFL 472 (532)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i 472 (532)
.+|+.+...+.|.+++...+++.-|+..|+-.+-.+++...
T Consensus 105 ~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 105 VFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 33444444456777777788888999999999888887654
No 310
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=66.24 E-value=24 Score=33.24 Aligned_cols=110 Identities=13% Similarity=0.079 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccchh--HHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhhhhhhhhhhhHhhh
Q 009536 126 EGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYIS 203 (532)
Q Consensus 126 ~~~~~s~~~l~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 203 (532)
-|..-++..+..+++.+..|.+--++.|. ..+.++.+..+...++++-.+++|..+++-++.+.-.....+++..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 36667777888889999999998888775 3444455555666666777789999888888887777778888888888
Q ss_pred hcCCcccccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 204 EVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 204 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
+....+.-|..+|+... ++.++-.++.....+
T Consensus 353 ~nL~~e~~gLvFGiNTF---vAl~lQsilT~iVvd 384 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTF---VALILQSILTLIVVD 384 (433)
T ss_pred HhhhhhhheeeeehHHH---HHHHHHHhheEEEEc
Confidence 88888878888887654 344444444444444
No 311
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.56 E-value=18 Score=26.96 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHhhhcccccc-chhHH
Q 009536 128 LVVSIFIAGAFVGSISSGSLADKL-GCRRT 156 (532)
Q Consensus 128 ~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~ 156 (532)
+-.++-+++..+.....||+.||| |.++.
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 334455566666677789999997 44443
No 312
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=63.40 E-value=66 Score=32.75 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhhhhHhhhhhcCCc
Q 009536 365 SLLVGVTNFAGALCASYLMDKEGRQ 389 (532)
Q Consensus 365 ~~~~~~~~~~~~~~~g~l~d~~g~~ 389 (532)
...+.+.+.+++..++++-..++.+
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 3344555666666666666666543
No 313
>COG4769 Predicted membrane protein [Function unknown]
Probab=62.42 E-value=7.9 Score=31.31 Aligned_cols=53 Identities=15% Similarity=0.114 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHHHhhh
Q 009536 132 IFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLG 190 (532)
Q Consensus 132 ~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 190 (532)
++.+...+.+...-++..++|+|.+-.+|.-.+ .++.+|..++++.+++.|--
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcc
Confidence 445555666777778889999998766655433 46789999999999987643
No 314
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=62.17 E-value=40 Score=27.38 Aligned_cols=51 Identities=18% Similarity=0.058 Sum_probs=33.7
Q ss_pred hcHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHH
Q 009536 175 HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (532)
Q Consensus 175 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 228 (532)
+++..++..-.+.|+| ...+.+.+++.-+.+++-|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3444455554444444 34455667777788888899999988888877554
No 315
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=61.78 E-value=1.3e+02 Score=29.00 Aligned_cols=45 Identities=11% Similarity=0.075 Sum_probs=29.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhhHhHHHHHHHH
Q 009536 456 GKIMGFSFSVHWVCNFLVGLFFLDLVETFGVAPVYAGFGGVSLLS 500 (532)
Q Consensus 456 ~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (532)
....+....+-..-..+.|.+.|.+....+.+..-.++++-.++.
T Consensus 174 t~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vs 218 (503)
T KOG2601|consen 174 TNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVS 218 (503)
T ss_pred hhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHH
Confidence 333455555666777899999998887766655544555544443
No 316
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=59.55 E-value=51 Score=32.83 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHH
Q 009536 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITS 229 (532)
Q Consensus 179 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 229 (532)
.+++.-.+.-+..-..+++..+.-+...+|.-=|..|.+.+...++|.-.-
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP 457 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWP 457 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCch
Confidence 344456777788888888889999999999989999999999888885433
No 317
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.49 E-value=24 Score=26.31 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=27.6
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009536 452 NRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFG 485 (532)
Q Consensus 452 ~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 485 (532)
+..++.+.++-...-.+++.+.....|++.|++-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4456778888777888899998999999999864
No 318
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=47.00 E-value=59 Score=21.30 Aligned_cols=46 Identities=17% Similarity=0.101 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhcCCCCCCcchhHHHHHhhHHHHHHHHHHhcccccC
Q 009536 221 GTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (532)
Q Consensus 221 ~~~~g~~~g~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 267 (532)
+.-+|.++|.+.+.......+ ++....+..+.+++..++...++++
T Consensus 10 s~il~~vvgyI~ssL~~~~~n-~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYN-FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344555555555544444444 7777777777777766666566554
No 319
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=46.98 E-value=62 Score=26.31 Aligned_cols=42 Identities=21% Similarity=0.382 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHH
Q 009536 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 130 ~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 171 (532)
+.-|.+++.+...+.|++.+|..+++..........++.+.+
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 346788889999999999999887643333333333333333
No 320
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=45.43 E-value=37 Score=25.41 Aligned_cols=51 Identities=24% Similarity=0.098 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh
Q 009536 124 ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA 174 (532)
Q Consensus 124 ~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 174 (532)
...|=+.++|.-.+.+.++.+++..|+.-+-+-=.+|..++.++..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445778899999999999999999999998888888888877777665543
No 321
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=45.12 E-value=1.5e+02 Score=27.97 Aligned_cols=39 Identities=8% Similarity=-0.087 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPIL 125 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (532)
+|+....+.+++.+.-... ..+..-..+.++ |.+.+..|
T Consensus 8 ~~~~~~~~~lgQ~lsl~~~-~t~~~s~~l~~~-~~~~P~~Q 46 (334)
T PF06027_consen 8 TRRFWIVLLLGQVLSLCIT-GTGTFSSLLANK-GVNIPTFQ 46 (334)
T ss_pred HHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhc-CccCcHHH
Confidence 4445555556655543332 223333445555 66434443
No 322
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=44.25 E-value=2.8e+02 Score=26.21 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=22.6
Q ss_pred HHHHHHHhhhhHhhhhhcCCchhhhhhHHHHH
Q 009536 369 GVTNFAGALCASYLMDKEGRQKLLIGSYLGMA 400 (532)
Q Consensus 369 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 400 (532)
.+..+...++.+.+++++|-|..+.++.....
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ 99 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYA 99 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34455566666699999999998876655444
No 323
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.01 E-value=40 Score=33.59 Aligned_cols=10 Identities=10% Similarity=0.524 Sum_probs=5.8
Q ss_pred hhhhcCCcch
Q 009536 316 SELLEEPHSR 325 (532)
Q Consensus 316 ~~~~~~~~~~ 325 (532)
.+++|.|+..
T Consensus 318 GDVFR~P~~~ 327 (628)
T KOG1278|consen 318 GDVFRPPRNS 327 (628)
T ss_pred cccccCCCCC
Confidence 4567666543
No 324
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=42.42 E-value=1.9e+02 Score=26.80 Aligned_cols=82 Identities=16% Similarity=0.172 Sum_probs=46.8
Q ss_pred chHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccc---cchhHHHHHh
Q 009536 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK---LGCRRTFQID 160 (532)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr---~Grr~~l~~~ 160 (532)
++....+.+..++++.-+..+..+..+..+.+.++. -....+++.++. ...+..+-.++ ||.||.=+++
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hm--l~D~~al~lal~------A~~~a~r~~~~~~TfGy~R~eiLa 93 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHM--LSDALALLLALI------AIKLARRPATKRFTFGYKRLEILA 93 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHH--HHHHHHHHHHHH------HHHHhcCCCCCCCCccHhHHHHHH
Confidence 344445555555555555666666667777787775 333334433332 22333444444 8888887777
Q ss_pred hHHHHHHHHHHHh
Q 009536 161 TIPLILGAIISAQ 173 (532)
Q Consensus 161 ~~~~~~~~~~~~~ 173 (532)
.++.++..+..++
T Consensus 94 a~~nav~Li~~s~ 106 (296)
T COG1230 94 AFLNALLLIVVSL 106 (296)
T ss_pred HHHHHHHHHHHHH
Confidence 7776665555443
No 325
>PRK02237 hypothetical protein; Provisional
Probab=41.27 E-value=61 Score=24.40 Aligned_cols=50 Identities=18% Similarity=0.028 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhh
Q 009536 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA 174 (532)
Q Consensus 125 ~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 174 (532)
..|=+.++|.-.+.+.++.+++..|+.-+-+-=.+|..++.+|..+..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 36778899999999999999999999988777778877777777665444
No 326
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=40.76 E-value=70 Score=27.04 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhhhccccccch
Q 009536 130 VSIFIAGAFVGSISSGSLADKLGC 153 (532)
Q Consensus 130 ~s~~~l~~~~~~~~~G~l~dr~Gr 153 (532)
+.-|.+++.+...+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 446788899999999999999875
No 327
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=40.60 E-value=1.5e+02 Score=22.16 Aligned_cols=28 Identities=11% Similarity=-0.027 Sum_probs=12.2
Q ss_pred HHHhhhhHhhhhhcCCchhhhhhHHHHH
Q 009536 373 FAGALCASYLMDKEGRQKLLIGSYLGMA 400 (532)
Q Consensus 373 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 400 (532)
++|.+++-||-.+++....+.+.+++.+
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 3343444444445665544443333333
No 328
>COG1288 Predicted membrane protein [Function unknown]
Probab=38.13 E-value=4e+02 Score=26.20 Aligned_cols=98 Identities=18% Similarity=0.212 Sum_probs=50.7
Q ss_pred HHhhHHHHHHHHHHHhhhcHH--HHHHHHHHHhh------hhhhhhhhhhHhhhhcCCcccccchhhHhHHHHHHHHHHH
Q 009536 158 QIDTIPLILGAIISAQAHSLD--EMLWGRFLVGL------GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITS 229 (532)
Q Consensus 158 ~~~~~~~~~~~~~~~~a~~~~--~l~~~r~l~G~------~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 229 (532)
+.-.++....+++..+++... ..++...+.++ |.+...-...+=++|...-. |..+..-++.+.++-.++.
T Consensus 358 i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~ltMPImAPLaD~vgv~-RqvvV~Afq~g~G~~n~I~ 436 (481)
T COG1288 358 ILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVLTMPIMAPLADLVGVP-RQVVVLAFQLGDGFSNIIA 436 (481)
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHhhchhhhhhHHhcCCC-HHHhhhhhhhcchhhheec
Confidence 344455556666666654432 23344444443 33333333344457776655 6777777777777766665
Q ss_pred HHhcC-------CCCCCcchhHHHHHhhHHHHHH
Q 009536 230 LFLGI-------PAEDDPHWWRTMLYIASLPGFI 256 (532)
Q Consensus 230 ~~~~~-------~l~~~~~~wr~~f~~~~~~~~~ 256 (532)
|.-+. .=.++..||++.+-...+..++
T Consensus 437 PTSg~~ma~La~~~i~y~~W~Kfv~pl~~i~~li 470 (481)
T COG1288 437 PTSGLLMATLAMARVPYGTWLKFVAPLLGILFLI 470 (481)
T ss_pred CchHHHHHHHHHccCChhHHHHHHHHHHHHHHHH
Confidence 54221 1223444577666555544444
No 329
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.55 E-value=33 Score=29.93 Aligned_cols=88 Identities=16% Similarity=0.208 Sum_probs=51.5
Q ss_pred hhccccccch-----hHHHHHhhHHHHHHHHHHHhhhc------HHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCccccc
Q 009536 144 SGSLADKLGC-----RRTFQIDTIPLILGAIISAQAHS------LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRG 212 (532)
Q Consensus 144 ~G~l~dr~Gr-----r~~l~~~~~~~~~~~~~~~~a~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~ 212 (532)
.+.++||||- |-++-.-.+...+|++.+++-.+ ...=...-.-.|+|.|..+.++..-+.+.+|+. ..
T Consensus 127 laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P~~-a~ 205 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYPEM-AD 205 (241)
T ss_pred eeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCcch-HH
Confidence 3567899984 33333323333333333332221 112244556679999999999999999999753 55
Q ss_pred chhhHhHHHHHHHHHHHHHh
Q 009536 213 SLGTLCQVGTCLGIITSLFL 232 (532)
Q Consensus 213 ~~~~~~~~~~~~g~~~g~~~ 232 (532)
...++....+.+..+.|-.+
T Consensus 206 ~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 206 QILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56666666665555555443
No 330
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=36.54 E-value=2e+02 Score=24.87 Aligned_cols=64 Identities=17% Similarity=0.334 Sum_probs=32.7
Q ss_pred cccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-hhhHhHHHHHHHHHHhh
Q 009536 440 PVTGLVIPELSSNRTRGKIMGFSFSVHWVCNFLVGLFFLDLVETFGVA-PVYAGFGGVSLLSALFA 504 (532)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~-~~~~~~~~~~~~~~~~~ 504 (532)
|....+..+. ++++|-+..--......+...+....+..+.+.+|.. ..|-+.+++.+....+-
T Consensus 22 p~f~~lt~~~-~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~~ 86 (203)
T PF01914_consen 22 PIFLSLTKGM-SPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIALE 86 (203)
T ss_pred HHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 3333444444 4444444443334444444455555666677777744 45666666655554444
No 331
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=35.50 E-value=3.5e+02 Score=28.83 Aligned_cols=53 Identities=13% Similarity=0.052 Sum_probs=34.3
Q ss_pred Hhhhccccc----cchhHHHHHhhHHHHHHHHHHHhhhc-HHHHHHHHHHHhhhhhhh
Q 009536 142 ISSGSLADK----LGCRRTFQIDTIPLILGAIISAQAHS-LDEMLWGRFLVGLGIGVN 194 (532)
Q Consensus 142 ~~~G~l~dr----~Grr~~l~~~~~~~~~~~~~~~~a~~-~~~l~~~r~l~G~~~g~~ 194 (532)
.+.+-++|. -||.+-++++.+++.++++...+... .+.+..+-++.+++.+..
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 334556664 36777788888888888888776644 445555666666655433
No 332
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=33.35 E-value=1e+02 Score=23.21 Aligned_cols=50 Identities=8% Similarity=-0.069 Sum_probs=39.4
Q ss_pred ChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHH
Q 009536 359 TDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVG 408 (532)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 408 (532)
...+-.+..++-..++.+++.++..|+..+-+.=.++..++.++..++.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 45677888888889999999999999988877777777777666655443
No 333
>PRK10263 DNA translocase FtsK; Provisional
Probab=31.67 E-value=77 Score=35.71 Aligned_cols=14 Identities=14% Similarity=0.207 Sum_probs=6.2
Q ss_pred HHHHHHHhcCCCCC
Q 009536 225 GIITSLFLGIPAED 238 (532)
Q Consensus 225 g~~~g~~~~~~l~~ 238 (532)
|+++|.+++.++..
T Consensus 143 GGIIG~lLs~lL~~ 156 (1355)
T PRK10263 143 GGVIGSLLSTTLQP 156 (1355)
T ss_pred cchHHHHHHHHHHH
Confidence 44444444444433
No 334
>COG2119 Predicted membrane protein [Function unknown]
Probab=30.72 E-value=3.3e+02 Score=23.06 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHH
Q 009536 133 FIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (532)
Q Consensus 133 ~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 170 (532)
..+...++-+.+.++++|+..|++-.++.+++.+..+.
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~ 180 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALV 180 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 34556677788889999999999988888877665543
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.86 E-value=2e+02 Score=21.57 Aligned_cols=27 Identities=7% Similarity=0.132 Sum_probs=13.2
Q ss_pred HHHHhhhccccc-cchhHHHHHhhHHHH
Q 009536 139 VGSISSGSLADK-LGCRRTFQIDTIPLI 165 (532)
Q Consensus 139 ~~~~~~G~l~dr-~Grr~~l~~~~~~~~ 165 (532)
+.+.+.|...|+ ||-++.+.+.+++.+
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 344445555554 665554444444433
No 336
>PRK02237 hypothetical protein; Provisional
Probab=29.81 E-value=1.8e+02 Score=22.00 Aligned_cols=50 Identities=12% Similarity=-0.021 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHHHHHHHHH
Q 009536 359 TDGALASLLVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAISMLLVVG 408 (532)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 408 (532)
++.+-.+..++-..++.+++.++..|+..+-+.=.++..++.++..++.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 34677888888889999999999999988777767777777666655433
No 337
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=29.54 E-value=1.4e+02 Score=21.55 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=27.6
Q ss_pred HHHHHhhhccccccch-------hHHHHHhhHHHHHHHHHHHhhhcH
Q 009536 138 FVGSISSGSLADKLGC-------RRTFQIDTIPLILGAIISAQAHSL 177 (532)
Q Consensus 138 ~~~~~~~G~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~a~~~ 177 (532)
....+.++++.+|.-+ ++.+.++.++...+.++++..+|.
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445555666666544 788888888888888888876654
No 338
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.84 E-value=1.2e+02 Score=22.03 Aligned_cols=29 Identities=7% Similarity=0.017 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCcc
Q 009536 458 IMGFSFSVHWVCNFLVGLFFLDLVETFGVA 487 (532)
Q Consensus 458 ~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 487 (532)
+--....+-.+++++| .+.|+..+.+++.
T Consensus 24 aEr~~q~ilti~aiVg-~i~Gf~~Qqls~t 52 (101)
T KOG4112|consen 24 AERFQQLILTIGAIVG-FIYGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3334455555555544 6677777777643
No 339
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=27.15 E-value=2.3e+02 Score=26.01 Aligned_cols=38 Identities=8% Similarity=-0.012 Sum_probs=21.3
Q ss_pred HHHhhHHHHHHHHHHHhh-hcHHHHHHHHHHHhhhhhhh
Q 009536 157 FQIDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVN 194 (532)
Q Consensus 157 l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~g~~ 194 (532)
++.+++++++++++..+. ++.+.+.+.-++.+++.+..
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 345556665666665554 44555555666666665533
No 340
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=26.48 E-value=5.6e+02 Score=27.37 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=35.7
Q ss_pred HHhhhccccc----cchhHHHHHhhHHHHHHHHHHHhhhcH-HHHHHHHHHHhhhhhhh
Q 009536 141 SISSGSLADK----LGCRRTFQIDTIPLILGAIISAQAHSL-DEMLWGRFLVGLGIGVN 194 (532)
Q Consensus 141 ~~~~G~l~dr----~Grr~~l~~~~~~~~~~~~~~~~a~~~-~~l~~~r~l~G~~~g~~ 194 (532)
+.+.+-++|. -||.+-++++.++++++++...+...+ +.+...-++.+++.+..
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 3444556664 356788888999998888888876544 45555566666665543
No 341
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=26.21 E-value=3.5e+02 Score=27.16 Aligned_cols=20 Identities=10% Similarity=-0.120 Sum_probs=10.4
Q ss_pred HHhhHHHHHHHHHHhccccc
Q 009536 247 LYIASLPGFILALGMQFTVE 266 (532)
Q Consensus 247 f~~~~~~~~~~~~~~~~~~~ 266 (532)
|.+..++.++..++.+..|.
T Consensus 5 ~~il~iiiv~~~ilt~~iPa 24 (465)
T PF03606_consen 5 FVILFIIIVFAAILTWIIPA 24 (465)
T ss_pred HHHHHHHHHHHHHHHhcCcc
Confidence 44444455555555555554
No 342
>PF14012 DUF4229: Protein of unknown function (DUF4229)
Probab=25.14 E-value=2e+02 Score=19.78 Aligned_cols=26 Identities=15% Similarity=0.335 Sum_probs=13.3
Q ss_pred HHHHHHHhhheeeccCCCCCHHHHHH
Q 009536 496 VSLLSALFAYYFIVETKGRSLEEIEM 521 (532)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (532)
..+++..+.+++.++.+++-.++.++
T Consensus 39 A~vis~~lS~~ll~~~R~~~~~~ia~ 64 (69)
T PF14012_consen 39 ALVISMPLSYVLLRRLRDRASADIAA 64 (69)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666555444444443
No 343
>PRK10692 hypothetical protein; Provisional
Probab=25.10 E-value=2e+02 Score=20.65 Aligned_cols=19 Identities=11% Similarity=0.242 Sum_probs=10.5
Q ss_pred hhHHHHHhhHHHHHHHHHH
Q 009536 153 CRRTFQIDTIPLILGAIIS 171 (532)
Q Consensus 153 rr~~l~~~~~~~~~~~~~~ 171 (532)
||...++|.++++++.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 5555566666655554443
No 344
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=24.21 E-value=1.8e+02 Score=23.58 Aligned_cols=51 Identities=20% Similarity=0.164 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHHHHHHhhhcHHHHHHHHHH
Q 009536 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (532)
Q Consensus 130 ~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 186 (532)
.-.+.++..+.+...-.+..|+.||+.-.++.. ++.++++|..|++++.++
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giS------i~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGIS------IAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 345677777777877888888877665444432 334556777777766655
No 345
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=23.89 E-value=1.1e+02 Score=29.74 Aligned_cols=16 Identities=13% Similarity=0.112 Sum_probs=8.1
Q ss_pred HHHHHhhhhHhhhhhc
Q 009536 371 TNFAGALCASYLMDKE 386 (532)
Q Consensus 371 ~~~~~~~~~g~l~d~~ 386 (532)
..++.....|++..|.
T Consensus 7 ~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3344444555666654
No 346
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=23.30 E-value=49 Score=21.87 Aligned_cols=11 Identities=18% Similarity=0.338 Sum_probs=4.9
Q ss_pred hheeeccCCCC
Q 009536 504 AYYFIVETKGR 514 (532)
Q Consensus 504 ~~~~~~~~~~~ 514 (532)
.+.+.|+.|++
T Consensus 27 ~~ayr~~~K~~ 37 (60)
T COG4736 27 YFAYRPGKKGE 37 (60)
T ss_pred HHHhcccchhh
Confidence 33445544443
No 347
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=22.62 E-value=7.7e+02 Score=24.54 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=82.7
Q ss_pred HHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHhhHHHHHHH
Q 009536 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (532)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 168 (532)
.+++.+-.++..+......|. .+..++++ +..+...+.+.-.+...++.++--....+.|-|-....|.-...++.
T Consensus 18 ~~~lglQH~lamfg~~V~VPl--ivg~a~~l--~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p 93 (451)
T COG2233 18 LLLLGLQHLLAMFGATVLVPL--LVGLALGL--SAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAP 93 (451)
T ss_pred HHHHHHHHHHHHHhcchHhhH--HhccCCCC--CHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHH
Confidence 555666666666666555444 34566777 88888999999999988988887664445666766666666666665
Q ss_pred HHHHhhh---cHHHHHHHHHHHhhhhhhhhhhhhHhhhhcCCcccccchhhHh
Q 009536 169 IISAQAH---SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC 218 (532)
Q Consensus 169 ~~~~~a~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 218 (532)
....... .....+-+-+..|+..-...+.....+...+||---|....+.
T Consensus 94 ~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~I 146 (451)
T COG2233 94 MIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLVI 146 (451)
T ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeeee
Confidence 5554442 3666666677777765544444433788899987666555443
No 348
>COG2119 Predicted membrane protein [Function unknown]
Probab=22.55 E-value=2.3e+02 Score=23.96 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhhhHhhhhhcCCchhhhhhHHHHHH
Q 009536 367 LVGVTNFAGALCASYLMDKEGRQKLLIGSYLGMAI 401 (532)
Q Consensus 367 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 401 (532)
...+++.++.+.+.++++|+..|.+..++.++..+
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~ 176 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLI 176 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 34577888888999999999999887766554433
No 349
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=22.53 E-value=3.5e+02 Score=20.55 Aligned_cols=24 Identities=8% Similarity=0.026 Sum_probs=13.9
Q ss_pred HHHHhhhhhhhhhhhhHhhhhcCC
Q 009536 184 RFLVGLGIGVNTVLVPIYISEVAP 207 (532)
Q Consensus 184 r~l~G~~~g~~~~~~~~~i~~~~~ 207 (532)
|.+.+.|.-+....-.++..|...
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHH
Confidence 334444444556666777777665
No 350
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=22.00 E-value=6.6e+02 Score=24.11 Aligned_cols=44 Identities=16% Similarity=0.360 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHH
Q 009536 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVV 130 (532)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (532)
.++...++..+.....+..-.....+....+++|. ++...|.+.
T Consensus 219 ~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~--~~~F~G~iI 262 (368)
T COG0387 219 VLLSTGVLLIATVLVALLAEILVGSLEAVLESLGA--PPAFVGLII 262 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHH
Confidence 34445555666666666677777778888999998 776666543
No 351
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=21.92 E-value=2.6e+02 Score=23.99 Aligned_cols=31 Identities=16% Similarity=0.040 Sum_probs=23.1
Q ss_pred cccccchhhHhHHHHHHHHHHHHHhcCCCCC
Q 009536 208 TKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (532)
Q Consensus 208 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 238 (532)
.++.+++.++.-.+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3445788888778888888888888777644
No 352
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=20.71 E-value=88 Score=29.76 Aligned_cols=44 Identities=9% Similarity=0.193 Sum_probs=28.8
Q ss_pred CCchHHHHHHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHH
Q 009536 82 WLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEG 127 (532)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (532)
.+.+|..+..+...++...+......-.+....+++++ +..-+|
T Consensus 285 ~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~l--s~~Fig 328 (441)
T KOG1397|consen 285 NISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGL--SVKFIG 328 (441)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--Chhhhe
Confidence 34566666666666666666666666666777788887 665444
No 353
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=20.58 E-value=6.4e+02 Score=24.95 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=10.1
Q ss_pred hhHhhhhhcCCchhhhhhHHHH
Q 009536 378 CASYLMDKEGRQKLLIGSYLGM 399 (532)
Q Consensus 378 ~~g~l~d~~g~~~~~~~~~~~~ 399 (532)
+.-++.+.+.++++..+=.++.
T Consensus 310 ~~fflfE~~~~~~iHpiQY~LV 331 (430)
T PF06123_consen 310 LAFFLFELLSKLRIHPIQYLLV 331 (430)
T ss_pred HHHHHHHHHhcCcccHHHHHHH
Confidence 3344555555555443333333
No 354
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=20.14 E-value=7e+02 Score=24.03 Aligned_cols=39 Identities=8% Similarity=0.099 Sum_probs=27.1
Q ss_pred HHHHHHhhhhhhccccccchhHHHHHhhCCCCChhHHHHHH
Q 009536 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVV 130 (532)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (532)
..+..+........-.+...+....+++|+ ++...|.+.
T Consensus 225 ~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Gl--p~afiGvII 263 (366)
T PRK10599 225 IWLIIHLIAVIAVTKMNASPLETLLTSMNA--PVAFTGFLV 263 (366)
T ss_pred HHHHHHHHHHHHHHHHhHhhHHHHHHhcCC--CHHHHHHHH
Confidence 334444444445566677788889999999 888888765
Done!