Query 009537
Match_columns 532
No_of_seqs 451 out of 2790
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 07:26:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009537.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009537hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ilv_A Glutamine-dependent NAD 100.0 7.9E-86 2.7E-90 735.7 35.2 414 1-464 87-604 (634)
2 4f4h_A Glutamine dependent NAD 100.0 7.5E-68 2.6E-72 583.5 32.4 340 7-463 113-551 (565)
3 3sdb_A Glutamine-dependent NAD 100.0 2.1E-67 7.1E-72 590.9 31.9 421 1-470 96-659 (680)
4 3n05_A NH(3)-dependent NAD(+) 100.0 3.1E-58 1.1E-62 509.7 29.4 379 7-480 107-581 (590)
5 3p8k_A Hydrolase, carbon-nitro 100.0 2.3E-29 7.7E-34 254.0 19.0 166 3-202 105-273 (281)
6 3ivz_A Nitrilase; alpha-beta s 100.0 1.8E-29 6.1E-34 251.6 14.3 157 1-197 87-246 (262)
7 3hkx_A Amidase; alpha-beta-BET 100.0 1.3E-29 4.6E-34 255.9 13.1 166 2-202 104-272 (283)
8 2w1v_A Nitrilase-2, nitrilase 100.0 8.3E-29 2.8E-33 248.4 15.7 169 3-202 87-262 (276)
9 1f89_A 32.5 kDa protein YLR351 100.0 3.4E-28 1.2E-32 245.5 14.4 164 7-201 107-277 (291)
10 2e11_A Hydrolase; dimethylarse 100.0 3E-28 1E-32 242.8 13.2 166 2-202 84-257 (266)
11 2vhh_A CG3027-PA; hydrolase; 2 100.0 3.4E-28 1.2E-32 258.0 14.3 166 6-200 175-357 (405)
12 1uf5_A N-carbamyl-D-amino acid 99.9 3.7E-27 1.3E-31 238.8 17.1 165 8-202 106-290 (303)
13 2uxy_A Aliphatic amidase; nitr 99.9 8.2E-27 2.8E-31 241.9 16.5 153 8-197 114-269 (341)
14 2dyu_A Formamidase; AMIF, CEK, 99.9 3.9E-26 1.3E-30 236.1 15.7 157 9-201 114-273 (334)
15 1ems_A Nitfhit, NIT-fragIle hi 99.9 8.9E-27 3E-31 248.8 11.1 167 6-202 105-278 (440)
16 1wxi_A NH(3)-dependent NAD(+) 99.9 1.9E-24 6.4E-29 218.3 10.6 162 239-456 17-269 (275)
17 1kqp_A NAD+ synthase, NH(3)-de 99.9 8.1E-24 2.8E-28 213.1 11.8 160 240-456 17-266 (271)
18 1xng_A NH(3)-dependent NAD(+) 99.9 1E-22 3.5E-27 204.4 11.3 175 242-465 5-264 (268)
19 3q4g_A NH(3)-dependent NAD(+) 99.9 1E-22 3.6E-27 205.8 9.1 102 239-370 18-120 (279)
20 3p52_A NH(3)-dependent NAD(+) 99.9 5.9E-22 2E-26 197.3 10.0 162 241-455 5-247 (249)
21 2e18_A NH(3)-dependent NAD(+) 99.8 3E-21 1E-25 192.3 10.7 168 242-462 6-255 (257)
22 3fiu_A NH(3)-dependent NAD(+) 99.8 8.5E-21 2.9E-25 188.9 11.9 96 242-375 9-104 (249)
23 3dpi_A NAD+ synthetase; ssgcid 99.8 1.1E-20 3.7E-25 191.4 10.0 107 240-379 25-132 (285)
24 2hma_A Probable tRNA (5-methyl 98.9 3.4E-09 1.1E-13 111.3 10.3 111 256-404 3-137 (376)
25 2der_A TRNA-specific 2-thiouri 98.8 2.3E-08 8E-13 105.0 12.0 104 262-403 17-145 (380)
26 2vxo_A GMP synthase [glutamine 98.6 5.8E-08 2E-12 109.3 9.8 86 243-367 224-309 (697)
27 1gpm_A GMP synthetase, XMP ami 98.4 4.4E-07 1.5E-11 99.1 9.3 83 243-365 211-294 (525)
28 2pg3_A Queuosine biosynthesis 98.4 8.5E-07 2.9E-11 86.2 10.2 66 261-364 1-67 (232)
29 2dpl_A GMP synthetase, GMP syn 98.4 7.4E-07 2.5E-11 90.9 10.2 82 243-364 4-86 (308)
30 2ywb_A GMP synthase [glutamine 98.3 2.8E-06 9.7E-11 92.2 11.2 82 243-365 193-274 (503)
31 3uow_A GMP synthetase; structu 98.2 2.3E-06 8E-11 94.0 10.1 74 255-365 247-323 (556)
32 3bl5_A Queuosine biosynthesis 98.2 1.8E-06 6.1E-11 82.4 7.6 64 263-364 4-67 (219)
33 3tqi_A GMP synthase [glutamine 98.1 6.7E-06 2.3E-10 89.8 8.8 82 244-365 215-297 (527)
34 1vl2_A Argininosuccinate synth 98.1 5.5E-06 1.9E-10 87.9 7.6 100 262-401 14-131 (421)
35 3k32_A Uncharacterized protein 98.0 1.1E-05 3.8E-10 77.1 7.9 63 262-364 6-68 (203)
36 1jgt_A Beta-lactam synthetase; 97.9 1.6E-05 5.4E-10 86.6 9.1 84 240-363 217-302 (513)
37 2c5s_A THII, probable thiamine 97.8 3.3E-05 1.1E-09 81.8 9.1 94 263-399 188-299 (413)
38 1q15_A CARA; CMPR, (2S,5S)-5-c 97.8 3.7E-05 1.3E-09 83.5 9.7 89 241-369 215-307 (503)
39 1sur_A PAPS reductase; assimil 97.8 8.6E-05 2.9E-09 71.1 10.4 63 263-363 45-107 (215)
40 1kor_A Argininosuccinate synth 97.7 4.8E-05 1.6E-09 80.3 7.5 64 263-365 1-65 (400)
41 1k92_A Argininosuccinate synth 97.7 3.7E-05 1.3E-09 82.3 6.7 66 263-366 11-77 (455)
42 1ct9_A Asparagine synthetase B 97.6 0.00013 4.6E-09 79.9 10.3 87 251-363 213-301 (553)
43 2nz2_A Argininosuccinate synth 97.6 8.4E-05 2.9E-09 78.8 7.4 99 262-400 5-121 (413)
44 1wy5_A TILS, hypothetical UPF0 97.6 0.00013 4.6E-09 74.2 8.3 68 262-363 24-94 (317)
45 2o8v_A Phosphoadenosine phosph 97.4 0.00036 1.2E-08 68.8 9.2 63 263-363 46-108 (252)
46 3rjz_A N-type ATP pyrophosphat 97.4 0.00016 5.3E-09 71.2 6.3 66 261-364 3-74 (237)
47 1vbk_A Hypothetical protein PH 97.4 0.0004 1.4E-08 70.7 8.6 79 263-401 180-266 (307)
48 3a2k_A TRNA(Ile)-lysidine synt 97.3 0.00058 2E-08 73.3 9.3 74 255-362 7-87 (464)
49 1ni5_A Putative cell cycle pro 97.1 0.00069 2.4E-08 72.0 7.8 76 253-363 6-83 (433)
50 2wsi_A FAD synthetase; transfe 96.6 0.0038 1.3E-07 63.4 8.2 94 253-362 42-137 (306)
51 2oq2_A Phosphoadenosine phosph 96.6 0.0051 1.7E-07 60.9 8.4 65 263-362 42-110 (261)
52 1zun_A Sulfate adenylyltransfe 96.4 0.011 3.7E-07 60.6 9.6 67 263-363 47-113 (325)
53 2goy_A Adenosine phosphosulfat 95.8 0.032 1.1E-06 55.5 9.8 62 263-363 55-116 (275)
54 3fwk_A FMN adenylyltransferase 91.5 0.44 1.5E-05 48.3 8.2 99 243-360 37-140 (308)
55 3p8k_A Hydrolase, carbon-nitro 40.5 56 0.0019 31.7 7.2 68 101-170 49-127 (281)
56 3hkx_A Amidase; alpha-beta-BET 30.4 1.2E+02 0.0042 29.2 7.8 69 100-170 48-128 (283)
57 1g8m_A Aicar transformylase-IM 26.9 85 0.0029 34.3 6.2 56 83-146 533-589 (593)
58 3flu_A DHDPS, dihydrodipicolin 25.4 1.6E+02 0.0056 28.8 7.7 43 250-292 30-72 (297)
59 1fs5_A Glucosamine-6-phosphate 24.1 70 0.0024 30.7 4.6 34 240-273 7-43 (266)
60 1t1v_A SH3BGRL3, SH3 domain-bi 22.6 1.9E+02 0.0063 22.6 6.2 48 329-377 5-55 (93)
61 1u6t_A SH3 domain-binding glut 22.5 1.2E+02 0.004 26.2 5.2 36 328-363 2-40 (121)
62 2vhh_A CG3027-PA; hydrolase; 2 22.4 2.1E+02 0.0072 29.3 8.1 69 101-170 108-194 (405)
63 2v79_A DNA replication protein 21.9 15 0.0005 32.4 -0.7 85 388-495 27-116 (135)
64 3fkr_A L-2-keto-3-deoxyarabona 20.8 2E+02 0.0068 28.4 7.3 35 245-279 26-60 (309)
65 4ehi_A Bifunctional purine bio 20.2 1.1E+02 0.0038 33.0 5.5 53 85-145 476-529 (534)
No 1
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=7.9e-86 Score=735.69 Aligned_cols=414 Identities=27% Similarity=0.427 Sum_probs=360.6
Q ss_pred CCeeeCCeeEEEEEEEeCCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeCC
Q 009537 1 MPVIKGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFLD 80 (532)
Q Consensus 1 mPv~~~g~~YN~avvi~~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~~ 80 (532)
+|+++++++|||++++.+|+|+++|+|+|||++|+|+|.|||+||+... .+++. .++..+|||+.+|++++
T Consensus 87 ~p~~~~~~lyNsa~vi~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~~~-~~~~~--------~~g~~~p~g~~vf~~~g 157 (634)
T 3ilv_A 87 LPMRIAGITYNCVCLVENGIVKGFSAKQFLANEGVHYETRWFTAWPRNH-TTTFL--------YNDVKYPFGDVLYNVKD 157 (634)
T ss_dssp EEEEETTEEEEEEEEEETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTC-EEEEE--------ETTEEEEEESCCEEETT
T ss_pred eeEeeCCCccEEEEEEECCeEEEEEcCEeCCCCCCcChhhhcCCCCccc-cceec--------ccCcccccCCeEEEECC
Confidence 4677889999999999999999999999999999999999999998752 22332 36789999999999999
Q ss_pred ccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEE
Q 009537 81 TAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSC 160 (532)
Q Consensus 81 ~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~ 160 (532)
++||++||||+|||+++++.++++|||||+|||+||+..+|...|..+++++|.+|+++|+|||++|+++++++|+|+|+
T Consensus 158 ~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~~~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~ 237 (634)
T 3ilv_A 158 ARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVL 237 (634)
T ss_dssp EEEEECCTTC----------CGGGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEE
T ss_pred EEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEE
Confidence 99999999999999669999999999999999999999999999999999999999999999999999878899999999
Q ss_pred EEeCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCchhhhhhccCCccEEEEeeeccCCccccccCCCCccccCCC
Q 009537 161 VVVNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQEQASCKTKISSVAVQYSLCQPFNLKMSLSGPLKITYHS 240 (532)
Q Consensus 161 I~~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~~p~~~~~~~ 240 (532)
|+|+|++++++++|+++++++++++||++.++..|.+. +..++.
T Consensus 238 I~p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~------------------------------------~~~~~~ 281 (634)
T 3ilv_A 238 IAHKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVL------------------------------------TQDDLE 281 (634)
T ss_dssp EEETTEEEEECCSSCSSSEEEEEEEEEC--------------------------------------------------CC
T ss_pred EEcCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcC------------------------------------CCCCCC
Confidence 99999999999999876778999999999887666320 011457
Q ss_pred cHHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHH-----HhcccCCCCC
Q 009537 241 PEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAI-----RIGRYANGEF 315 (532)
Q Consensus 241 peeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~-----~i~~~~~~~~ 315 (532)
|+|||+.+++|||||||+++|.+|++||||||+|||++|+||++||+++++++ |+++|+.+++ ++......+.
T Consensus 282 ~~~~~~~~~~~~l~d~~~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~al--G~~~v~~~~~~~~~~~~~~~~~~~~ 359 (634)
T 3ilv_A 282 KEFEFWEATSLGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKEL--GLTAFLQKSNMETLFDLPALQHLPF 359 (634)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHTCGGGCCSSCSSCTTS
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHh--Cchhhhhhhhccccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999997 7899999987 3443333457
Q ss_pred CCchhhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhhhhhCCCCCCc------------
Q 009537 316 PTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYK------------ 383 (532)
Q Consensus 316 p~~~~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~~~~g~~p~~~------------ 383 (532)
|+++++||+..|+||||++.+|+..++++|++||+.||++|++|||+++++++.+.|...+|++|+|+
T Consensus 360 ~~~~~~~~~~~~~~v~m~~~~ss~~~~~dA~~la~~LGi~~~~IdI~~~~~~~~~~~~~~~g~~p~~~~~~~~~~N~qaR 439 (634)
T 3ilv_A 360 EEQAKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGATFYNWSVDEEIEQYKATIENVIERPLTWEKDDITLQNIQAR 439 (634)
T ss_dssp HHHHHHHHHHHEEEEEEECTTCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHHHHHHHHHTTSCCCTTTCHHHHHHHHHH
T ss_pred ccchhHhhhheeeeeecCCCCCCHHHHHHHHHHHHHhCCcEEEEccHHHHHHHHHHHHHhhCCCcccccCcchhhhhhHH
Confidence 78899999999999999999999999999999999999999999999999999999988889988765
Q ss_pred --------------------------------------------------------------------------------
Q 009537 384 -------------------------------------------------------------------------------- 383 (532)
Q Consensus 384 -------------------------------------------------------------------------------- 383 (532)
T Consensus 440 ~R~~~l~~~A~~~g~lvlgTgnksE~~~Gy~T~ygD~~~~~~Pl~~l~KteVr~la~~l~~~~glp~l~~i~~k~pSaeL 519 (634)
T 3ilv_A 440 GRAPIIWMLTNVKQALLITTSNRSEGDVGYATMDGDTAGGIAPIAGVDKDFIRSWLRWAEKNRNQHGLHIVNKLAPTAEL 519 (634)
T ss_dssp TTHHHHHHHHHHHTCEEBCCCCHHHHHTTCSCTTTTTCSSBBTTTTSCHHHHHHHHHHHHHHSCCGGGSSCC--------
T ss_pred HHHHHHHHHHHhcCCEEeccCchhhHhhCCccccCCcccCCcccCCCcHHHHHHHHHHHHHcCCCchHHHHcCCCCCcCc
Confidence
Q ss_pred -------chhhhcCCCEeeeceeeEEEeecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccc
Q 009537 384 -------LDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYH 456 (532)
Q Consensus 384 -------tDE~dmGmtY~~L~~~~rlr~~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h 456 (532)
+||++| |||++||.|++++++.++||.+|+.++.+.|+ +++++|++||++||++|++|||||+++||++|
T Consensus 520 ~p~~~~q~de~~l-~~Y~~lD~~l~~~~~~~~~~~~i~~~~~~~~~--~~~~~i~~~v~~~~~~~~~~~~Kr~~~pp~~~ 596 (634)
T 3ilv_A 520 RPSEYTQTDERDL-MPYDVLARIERKAIKERLSPVQVYTALLTEGP--YTKNEFKYWVKKFFRLWSINQWKRERLAPSFH 596 (634)
T ss_dssp -----------CC-CTTTHHHHHHHHHTTSCCCHHHHHHHHHHHCS--SCHHHHHHHHHHHHHHHHHTHHHHTTCCCBCC
T ss_pred CcCCCCCCCcccc-CCHHHHHHHHHHHHHcCCCHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHhHhccccCCCceE
Confidence 789999 99999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred cccCCCCC
Q 009537 457 AESYSPED 464 (532)
Q Consensus 457 ~e~ys~dd 464 (532)
+++||+|.
T Consensus 597 v~~~~~~p 604 (634)
T 3ilv_A 597 MDDFNIDP 604 (634)
T ss_dssp CSSCCCCT
T ss_pred EeCCCCCC
Confidence 99999993
No 2
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=7.5e-68 Score=583.53 Aligned_cols=340 Identities=20% Similarity=0.254 Sum_probs=293.6
Q ss_pred CeeEEEEEEEeCCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeCCccEEEe
Q 009537 7 SERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFLDTAVAVE 86 (532)
Q Consensus 7 g~~YN~avvi~~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~~~~iG~e 86 (532)
+++|||++++.+|+|+++|+|+|||+++.|+|+|||+||+.. .+|++++++||++
T Consensus 113 ~~lyNsa~vi~~G~i~~~y~K~hLp~~~~f~E~r~f~~G~~~-------------------------~v~~~~g~~iGv~ 167 (565)
T 4f4h_A 113 VDTYNAASLIVGGEVAGTYRKQDLPNTEVFDEKRYFATDAAP-------------------------YVFELNGVKFGVV 167 (565)
T ss_dssp CSEEEEEEEEETTEEEEEEECCSCCCSTTCCGGGTCCCCCCC-------------------------CEEEETTEEEEEC
T ss_pred CceEEEEEEEECCEEEEEEeeeecCCCcccceeccccCCCcc-------------------------eeEEecCcEEEEE
Confidence 469999999999999999999999999999999999999876 4899999999999
Q ss_pred eecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEEEE-eCC
Q 009537 87 VCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSCVV-VNG 165 (532)
Q Consensus 87 ICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~I~-~nG 165 (532)
||||+||| ++.+.++++|||||+||||||+..+|...|..+++++|.+|+++|+|+|++|++ ++++|+|+|+|+ |+|
T Consensus 168 IC~Dlwfp-e~~r~la~~GA~ii~~psAs~~~~gk~~~r~~ll~arA~e~~~~vvy~N~vG~~-~~~~f~G~S~iidp~G 245 (565)
T 4f4h_A 168 ICEDVWHA-SAAQLAKAAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQ-DELVFDGGSFVLDGAG 245 (565)
T ss_dssp CGGGGGSS-HHHHHHHHTTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHHCCCEEEEECEEEE-TTEEEEBCCEEECTTS
T ss_pred Eeehhccc-chhHHHHhCCCeeeecccccccccCcHHHHHHHHHHHHHHhCCcEEEeeeecCC-CCeEEECCcceecCCC
Confidence 99999999 789999999999999999999999999999999999999999999999999998 678999999999 999
Q ss_pred cEEEecCCCCcCceeEEEEEEecchhhhhhccCCchhhhhhccCCccEEEEeeeccCCccccccCCCCccccCCCcHHHH
Q 009537 166 DMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQEQASCKTKISSVAVQYSLCQPFNLKMSLSGPLKITYHSPEEEI 245 (532)
Q Consensus 166 ~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~~p~~~~~~~peeei 245 (532)
++++++++|++ +++++++|..... + ... .....+++||
T Consensus 246 ~vla~~~~f~e---~~~~~d~d~~~~~------~------------------~~~---------------~~~~~~~~~~ 283 (565)
T 4f4h_A 246 ELVAKMPQFEE---GNAIVEFDGARAL------P------------------AAI---------------APALSVEAQV 283 (565)
T ss_dssp CEEEECCBSCC---EEEEEEEETTEEC------C------------------CCB---------------CCCCCHHHHH
T ss_pred cEEEEcccccc---ceEEEEecccccc------c------------------ccc---------------ccCcchHHHH
Confidence 99999999975 5666776642110 0 000 1123567999
Q ss_pred HhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCC
Q 009537 246 AFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKR 325 (532)
Q Consensus 246 ~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~ 325 (532)
++++++||||||+|+|++|++||||||+|||++|+|+ ++| ++.+
T Consensus 284 ~~a~~~gl~dy~~k~g~~~~vlglSGGiDSal~~~la-------~~a--------------lg~~--------------- 327 (565)
T 4f4h_A 284 YRALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVA-------VDA--------------LGAE--------------- 327 (565)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHH-------HHH--------------HCGG---------------
T ss_pred HHHHHHHHHHHHHHcCCCcEEEecCCCccHHHHHHHH-------HHH--------------hCCc---------------
Confidence 9999999999999999999999999999999999998 477 5555
Q ss_pred eEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhhhhhCCCCCCc----------------------
Q 009537 326 IFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYK---------------------- 383 (532)
Q Consensus 326 ~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~~~~g~~p~~~---------------------- 383 (532)
+|++++||+.+||+.|+++|+.||+.||++|.+|+|+++++++...+...++..+.--
T Consensus 328 ~v~~v~mp~~~ts~~t~~~a~~la~~lg~~~~~i~i~~~~~~~~~~~~~~~~~~~~d~~~eN~qaR~R~~~l~~~an~~g 407 (565)
T 4f4h_A 328 RVRAVMMPSRYTAGISTTDAADMARRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 407 (565)
T ss_dssp GEEEEECCCTTCCHHHHHHHHHHHHHHTCEEEECCCHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEEeccccccccchHHHHHHHHHHhCCceeeeecchHHHHHHHHhhhcccCccchhhHhhhcchhhHHHHHHHHhhcC
Confidence 4999999999999999999999999999999999999999999887765444322210
Q ss_pred --------------------------------------------------------------------------chhhhc
Q 009537 384 --------------------------------------------------------------------------LDEVDM 389 (532)
Q Consensus 384 --------------------------------------------------------------------------tDE~dm 389 (532)
+||++|
T Consensus 408 ~lvlgTgn~sE~a~Gy~T~~Gd~~~~~~pi~~l~Kt~v~~l~~~~~~~~~~~~~~~ip~~i~~~~psaeL~~~Q~ded~l 487 (565)
T 4f4h_A 408 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGQPDIVPERILTRAPSAELRENQTDQDSL 487 (565)
T ss_dssp CEEEECCCHHHHHHTCSCTTTTTCSSEETTTTCCHHHHHHHHHHHHHTCCTTCCCSSCHHHHHC---------------C
T ss_pred CcccCCCchhhHhhccccccCCcccCchhccCccHHHHHHHHHHHhhhccccCcccChHHHcCCCCCcCcCCCCCCcccC
Confidence 899999
Q ss_pred CCCEeeeceeeEEEeecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccccc--cCCCC
Q 009537 390 GMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAE--SYSPE 463 (532)
Q Consensus 390 GmtY~~L~~~~rlr~~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h~e--~ys~d 463 (532)
| ||++||.|++.....+.+|.+++.+ .+++ +.|++|++++.+|||||.++||++|.. +||||
T Consensus 488 ~-~Y~~lD~~l~~~~~~~~~~~~i~~~-------~~~~----~~v~~~~~~~~~~~~KR~~~p~g~kv~~~af~~d 551 (565)
T 4f4h_A 488 P-PYDVLDAIMRMYMEEDRPLAEIVAA-------GYSE----ADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRD 551 (565)
T ss_dssp C-CHHHHHHHHHHHTTSCCCHHHHHHT-------TCCH----HHHHHHHHHHHHTHHHHTTSCCBCCCSSSCSSTT
T ss_pred C-CHHHHHHHHHHHHHcCCCHHHHHHc-------CCCH----HHHHHHHHHHHHhhhchhcCCCceEECCCCCCCC
Confidence 7 9999999999888888899888754 3664 779999999999999999999999976 57774
No 3
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=2.1e-67 Score=590.86 Aligned_cols=421 Identities=20% Similarity=0.241 Sum_probs=334.1
Q ss_pred CCeeeCCeeEEEEEEEeCCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccc-eeE---
Q 009537 1 MPVIKGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGY-GFI--- 76 (532)
Q Consensus 1 mPv~~~g~~YN~avvi~~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd-~v~--- 76 (532)
+|+++++++|||++++.+|+|+++|+|+|||++++|+|.|||+||+... + .| ++.|| ++|||+ .+|
T Consensus 96 ~p~~~~~~lyNsa~vi~~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~--~------~i-~~~g~-~vpfg~~~vf~~~ 165 (680)
T 3sdb_A 96 APLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGER--G------TI-RIGGA-DVAFGTDLLFAAS 165 (680)
T ss_dssp EEEEETTEEEEEEEEEETTEEEEEEECSCCCEETTEEGGGTEECCTTCC--S------EE-EETTE-EEEBSSCEEEEET
T ss_pred ceEEeCCCceEEEEEEeCCCEEEEEeeecCCCCCccChhhhcCCCCCCC--c------ee-eecCc-ccccCCceeEeee
Confidence 3678889999999999999999999999999999999999999998742 1 11 23454 899995 577
Q ss_pred EeCCccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcC-CcCCCCceee
Q 009537 77 QFLDTAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQ-QGCDGGRLYF 155 (532)
Q Consensus 77 ~~~~~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~-~G~dg~~l~f 155 (532)
++++++||++||||+|||+.+++.++++|||||+||||||+..+|.++|..+++.++++++++|||+|+ .|+++++++|
T Consensus 166 ~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~~~~~l~f 245 (680)
T 3sdb_A 166 DLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAW 245 (680)
T ss_dssp TCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEECCCTTSCCSSCCC
T ss_pred ccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCccccCcHHHHHHHHHHHHHHhCCcEEEEECCcccCCCCeEE
Confidence 689999999999999999766799999999999999999999999999999999999999999999998 5666688999
Q ss_pred eccEEEEeCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCchhhhhh----ccCCccEEEEeeeccCCccccccCC
Q 009537 156 DGCSCVVVNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQEQAS----CKTKISSVAVQYSLCQPFNLKMSLS 231 (532)
Q Consensus 156 dG~S~I~~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~~~~~----~~~~~~~v~~~~~l~~~~~~~~~~~ 231 (532)
+|+|+|+|+|++++++++|+. ++++++++||++.++..|.+++++..... ..+.|++|.++ +..+.. ...+.
T Consensus 246 ~G~S~I~p~G~vla~~~~f~~-~e~ll~adiDl~~l~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~ 321 (680)
T 3sdb_A 246 DGQTMIWENGALLAESERFPK-GVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFA--LDPPAG-DIGLL 321 (680)
T ss_dssp CCCEEEEETTEEEEECCSSCS-SCEEEEEEEEHHHHHHHHHHCHHHHHHHHHTHHHHHTCEEEEEC--CCCCCS-CCCCC
T ss_pred eccEEEEcCCEEEEECCCCCC-CCcEEEEEEcHHHHHHHHHhCCchhhhhhhhccccccceeeeee--ccCccc-ccccc
Confidence 999999999999999999954 35899999999999999988777654321 12346666544 432111 11356
Q ss_pred CCccccCCCcH---------HHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHH
Q 009537 232 GPLKITYHSPE---------EEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKA 302 (532)
Q Consensus 232 ~p~~~~~~~pe---------eei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~ 302 (532)
+++++.++.|+ +++...++.||+||++++|.++++|+||||+|||++|++++ +.+++
T Consensus 322 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~----~a~~~---------- 387 (680)
T 3sdb_A 322 REVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVAT----HAMDR---------- 387 (680)
T ss_dssp SCCCSCTTSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHH----HHHHH----------
T ss_pred ccccCCCCCCcchhhcchhHHHHHHHHHHHHHHHHHHcCCCcEEEEecCCccHHHHHHHHH----HHHHH----------
Confidence 78888888886 45666666679999999999999999999999998766653 12233
Q ss_pred HHHHhc--ccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhhhhh----
Q 009537 303 DAIRIG--RYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLT---- 376 (532)
Q Consensus 303 ~~~~i~--~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~~~~---- 376 (532)
++ .+ .+++++|++.+++++|+++|++||+.||++|++|||+++++++...+...+
T Consensus 388 ----lg~~~~---------------~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~i~~~~~~~~~~l~~~~~~~~ 448 (680)
T 3sdb_A 388 ----EGRPRS---------------DILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGE 448 (680)
T ss_dssp ----TTCCGG---------------GEEEEECCC--------CHHHHHHHHHTCEEEECCCHHHHHHHHHHC--------
T ss_pred ----hCCCCc---------------eEEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEECHHHHHHHHHHhchhhcCCC
Confidence 44 12 489999999999999999999999999999999999999987765443211
Q ss_pred -----------------------------------------CCCCCC------------c--------------------
Q 009537 377 -----------------------------------------GKRPRY------------K-------------------- 383 (532)
Q Consensus 377 -----------------------------------------g~~p~~------------~-------------------- 383 (532)
|.-..+ .
T Consensus 449 ~~~~~~~~N~~ar~R~~~l~~~A~~~g~lvlgTgn~sE~~~Gy~T~~~gD~~~~~~Pl~~l~K~eVr~lar~l~~~~~~~ 528 (680)
T 3sdb_A 449 KVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFG 528 (680)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHTEEEEECCCHHHHHHTCSCCSSSTTCCSEETTTTSCHHHHHHHHHHHHHHCTTC
T ss_pred CCcchhHHHhhHHHHHHHHHHHHHHcCCEEEeCCcHHhHhcCeeeccCCCccccccccCCCcHHHHHHHHHHHHhhcccc
Confidence 110011 0
Q ss_pred ----------------------------chhhhcCCCEeeeceeeEEEeecCCChHHHHHHHHHhhCCC-----------
Q 009537 384 ----------------------------LDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGAR----------- 424 (532)
Q Consensus 384 ----------------------------tDE~dmGmtY~~L~~~~rlr~~~~~gp~~m~~~L~~~w~~~----------- 424 (532)
+||++|| ||+.+|.|++...+.+.+|.+|+..+.+.|++.
T Consensus 529 ~~~~~ip~~i~~k~Ps~eL~p~~~~~~q~de~~lg-~Y~~~D~~L~~~~~~~~~~~~i~~~~~~a~~~~~~~~~~~~~~~ 607 (680)
T 3sdb_A 529 EKVGEVLQSVLDTEITPELIPTGEEELQSSEAKVG-PFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPK 607 (680)
T ss_dssp HHHHHHHHHHHHHHHC-------------CHHHHC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHSCTTSSCCCSSCCG
T ss_pred ccccCchHHHhcCCCCcCcCCCCCCCCCCchhhcC-CHHHHHHHHHHHHHCCCCHHHHHHHHHHHhccccccccccccch
Confidence 6999998 999999999998889999999999999999764
Q ss_pred -----CChHHHHHHHHHHHHHHh-hcccCcCcCCccccc-ccCCCCCCCcccc
Q 009537 425 -----LTPSEVAEKVKHFFKYYS-INRHKMTVLTPSYHA-ESYSPEDNRFDLR 470 (532)
Q Consensus 425 -----~~~~~i~~kVk~ff~~~~-~nrhKr~~~~Ps~h~-e~ys~ddnr~d~r 470 (532)
|++++|..|+++||+++. +|||||.++||++|. ...|++- |=|.|
T Consensus 608 ~~~~~y~~~~i~~~~~~f~~rf~~~~qfKr~~~p~gpkv~~~~~lsp-r~d~r 659 (680)
T 3sdb_A 608 SERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSP-RGDWR 659 (680)
T ss_dssp GGCCCCCHHHHHHHHHHHHHHHHTTSHHHHTTCCCCCCCCTTCCCCT-TTTCC
T ss_pred hhhcCCCHHHHHHHHHHHHHHHhhhccCCcccCCCCCEeCCCCCcCC-CcccC
Confidence 999999999999999555 599999999999999 6555542 33444
No 4
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=3.1e-58 Score=509.72 Aligned_cols=379 Identities=22% Similarity=0.256 Sum_probs=296.8
Q ss_pred CeeEEEEEEEeCCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeCCccEEEe
Q 009537 7 SERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFLDTAVAVE 86 (532)
Q Consensus 7 g~~YN~avvi~~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~~~~iG~e 86 (532)
+++|||++++.+|+|++.|+|+|||+++.|+|.|||+||+.. .+|+++++|||++
T Consensus 107 ~~lyNsa~vi~~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~~-------------------------~v~~~~g~~iG~~ 161 (590)
T 3n05_A 107 GAPRNAAAVLHRGRVALTFAKHHLPNYGVFDEFRYFVPGDTM-------------------------PIVRLHGVDIALA 161 (590)
T ss_dssp TCEEEEEEEEETTEEEEEEECCCCCSSSSCCHHHHCCCCCEE-------------------------EEEEETTEEEEEE
T ss_pred CCeeEEEEEEeCCEEEEEEeCccCCCCCccCccccccCCCcc-------------------------eEEEECCEEEEEE
Confidence 379999999999999999999999999999999999999864 4899999999999
Q ss_pred eecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEEEE-eCC
Q 009537 87 VCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSCVV-VNG 165 (532)
Q Consensus 87 ICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~I~-~nG 165 (532)
||||+|+|.++.+.++++|||||+|||+||+..+|..+|..+++++|.+|+++|+|||++|++ ++++|+|+|+|+ |+|
T Consensus 162 IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~~gk~~~~~~l~~~rA~e~~~~vv~an~~G~~-~~~~f~G~S~iidp~G 240 (590)
T 3n05_A 162 ICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQ-DELVFDGDSIVVDRDG 240 (590)
T ss_dssp EGGGGGSTTSHHHHHHHTTCSEEEEEECCBCCCCSSCHHHHHHHHHHHHHTSEEEEEECEEEE-TTEEEEBCCEEECTTS
T ss_pred eehhhccCChHHHHHHHcCCCEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEecccCC-CCeEEeCcEEEECCCC
Confidence 999999933899999999999999999999999999999999999999999999999999998 789999999999 999
Q ss_pred cEEEecCCCCcCceeEEEEEEecchhhhhhccCCchhhhhhccCCccEEEEeeeccCCccccccCC-CCccc---cCCCc
Q 009537 166 DMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQEQASCKTKISSVAVQYSLCQPFNLKMSLS-GPLKI---TYHSP 241 (532)
Q Consensus 166 ~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~-~p~~~---~~~~p 241 (532)
++++++++|++ ++++++||++.++..+. +...+.. ..+.++. ++.. + . ++. .+.+. ..+.+
T Consensus 241 ~vla~~~~~~e---~~~~~didl~~~~~~~~---~~~~~~~--~~~~~~~----~~~~-~-~-~~~~~~~~~~~~~~~~~ 305 (590)
T 3n05_A 241 EVVARAPQFSE---GCVVLDLDLPAAEAEPP---TGVVDDG--LRIDRLV----ISEE-P-L-PAYEAELAGGYADRLDA 305 (590)
T ss_dssp CEEEECCBTSC---EEEEEEEEECCCCSSCC---CSBCTTS--CEEEEEE----SCSS-C-C-CCCCCCCCCCBCCCCCH
T ss_pred cEEEEcCCCCC---cEEEEEEcccccccccc---ccccccc--ccccccc----cCCC-C-C-CcccccccccccccCCc
Confidence 99999999864 68999999987743211 1000000 0011111 1100 0 0 000 01111 23567
Q ss_pred HHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhh
Q 009537 242 EEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESRE 321 (532)
Q Consensus 242 eeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e 321 (532)
+|++..++++||+||++++|.++++|+||||+|||++|+|+. ++ +|.+
T Consensus 306 ~~~~~~~~~~~l~~~~~~~g~~~vvvglSGGvDSsv~a~la~-------~a--------------lG~~----------- 353 (590)
T 3n05_A 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIAC-------DA--------------LGAQ----------- 353 (590)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCEEEECCSSHHHHHHHHHHH-------HH--------------HCGG-----------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHH-------HH--------------hCcc-----------
Confidence 899999999999999999999999999999999999999884 55 4533
Q ss_pred ccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhh----------------------hh----
Q 009537 322 FAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQ----------------------TL---- 375 (532)
Q Consensus 322 ~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~----------------------~~---- 375 (532)
.+++++|++.++++.+.++|+++|+.||++|+++||+++++++...+. ..
T Consensus 354 ----~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~i~~~~~~~~~~l~~~~~~~~n~~ar~r~~~l~~~A~~~g~~ 429 (590)
T 3n05_A 354 ----NVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLGLTGLAEENLQSRLRGTTLMAISNQEGHI 429 (590)
T ss_dssp ----GEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECCSHHHHHHHHHHHCCCTHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred ----cEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEEChHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHhcCCE
Confidence 389999999999999999999999999999999999998877642210 00
Q ss_pred ---h--------CCC-----------C----------------------------CCc---------------chhhhcC
Q 009537 376 ---T--------GKR-----------P----------------------------RYK---------------LDEVDMG 390 (532)
Q Consensus 376 ---~--------g~~-----------p----------------------------~~~---------------tDE~dmG 390 (532)
| |.. | -+. +||++||
T Consensus 430 vl~TGn~se~~~Gy~t~~gd~~~~~~Pl~~l~K~eVr~la~~lg~~~~~~~~~~~ip~~i~~k~ps~~L~p~q~de~~l~ 509 (590)
T 3n05_A 430 VLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRNRAAAERGQTPPIPEASITKPPSAELRPGQVDTDSLP 509 (590)
T ss_dssp EBCCCCHHHHHHTCCCSSCTTSCSBCTTTTSCHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTCC----------------
T ss_pred EEeCCCHHHHhcCchhhcCCCccceeecCCCcHHHHHHHHHHhCcccccccccccChHHHhCCCCCCCCCCCCcCccccC
Confidence 1 100 0 011 6888886
Q ss_pred CCEeeeceeeEEEeecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccccccCCCCCCCcccc
Q 009537 391 MTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLR 470 (532)
Q Consensus 391 mtY~~L~~~~rlr~~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h~e~ys~ddnr~d~r 470 (532)
||+++|.|++.....+.+|.++... ++++ +.|+++++++.+|||||.++||.++..+.|++ .|.|
T Consensus 510 -~Y~~~D~~l~~~~~~~~~~~~i~~~-------~~~~----~~v~~~~~~~~~~~~KR~~~p~~~~v~~~~~~---~~~r 574 (590)
T 3n05_A 510 -DYPVLDAILELYVDRDTGADAIVAA-------GYDR----ELVVKTLRMVDTAEYKRRQYPPGTKISAKGFG---KDRR 574 (590)
T ss_dssp -CHHHHHHHHHHHHTSCCCHHHHHHT-------TCCH----HHHHHHHHHHHHTHHHHHSSCCCCCCSSSSSC---TTSC
T ss_pred -CHHHHHHHHHHHHHcCCCHHHHHHc-------CCCH----HHHHHHHHHHHhchhhhccCCCCceecCCCCC---CCcc
Confidence 9999998888767777888888763 3664 67888888999999999999999999999988 4444
Q ss_pred ccccCCCCCc
Q 009537 471 QFLYNARWPY 480 (532)
Q Consensus 471 ~fly~~~~~~ 480 (532)
||....|
T Consensus 575 ---~p~~~~~ 581 (590)
T 3n05_A 575 ---LPITNRW 581 (590)
T ss_dssp ---CCSSCCC
T ss_pred ---CcccCCC
Confidence 6665544
No 5
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=99.96 E-value=2.3e-29 Score=254.05 Aligned_cols=166 Identities=20% Similarity=0.236 Sum_probs=146.4
Q ss_pred eeeCCeeEEEEEEEe-CCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEe-CC
Q 009537 3 VIKGSERYNCQVLCL-NRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQF-LD 80 (532)
Q Consensus 3 v~~~g~~YN~avvi~-~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~-~~ 80 (532)
...++++||+++++. +|++++.|+|+||+. .|.|.+||+||+... .+|++ ++
T Consensus 105 ~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~--~f~E~~~f~~G~~~~------------------------~v~~~~~~ 158 (281)
T 3p8k_A 105 NIRNNQIFNTAFSVNKSGQLINEYDKVHLVP--MLREHEFLTAGEYVA------------------------EPFQLSDG 158 (281)
T ss_dssp EEETTEEEEEEEEECTTSCEEEEEECSCCCT--TTTGGGTCCCCSSCC------------------------CCEECTTC
T ss_pred EccCCcEEEEEEEEcCCCeEEEEEeeEECCC--CcCccccCcCCCCCc------------------------eeEEeCCC
Confidence 456789999999997 899999999999985 368999999998641 38999 99
Q ss_pred ccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEE
Q 009537 81 TAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSC 160 (532)
Q Consensus 81 ~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~ 160 (532)
++||+.||||+||| ++.+.++++|||||++|++|+... ...|..+++++|.+|++++++||++|.+ ++..|+|.|+
T Consensus 159 ~~ig~~IC~D~~fp-e~~r~~~~~Gadli~~psa~~~~~--~~~~~~~~~arA~en~~~vv~~n~~G~~-~~~~~~G~S~ 234 (281)
T 3p8k_A 159 TYVTQLICYDLRFP-ELLRYPARSGAKIAFYVAQWPMSR--LQHWHSLLKARAIENNMFVIGTNSTGFD-GNTEYAGHSI 234 (281)
T ss_dssp CEEEEEEGGGGGCT-HHHHHHHHTTCCEEEEEECCBGGG--HHHHHHHHHHHHHHHTSEEEEEECEEEC-SSCEEECCCE
T ss_pred cEEEEEEecCCCCc-HHHHHHHHCCCCEEEECCCCCCcc--HHHHHHHHHHHHHHcCCEEEEEccCcCC-CCcEEeeeEE
Confidence 99999999999999 788999999999999999998753 5677889999999999999999999998 5678999999
Q ss_pred EE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCchh
Q 009537 161 VV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQ 202 (532)
Q Consensus 161 I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~ 202 (532)
|+ |+|+++++ +.++ +++++++||++.++..|.+++.+.
T Consensus 235 ii~p~G~vl~~-~~~~---e~~l~~~id~~~~~~~R~~~p~~~ 273 (281)
T 3p8k_A 235 VINPNGDLVGE-LNES---ADILTVDLNLNEVEQQRENIPVFK 273 (281)
T ss_dssp EECTTSCEEEE-CCSS---CEEEEEEEETHHHHHHHHHSCGGG
T ss_pred EECCCCCEEEe-cCCC---CeEEEEEEcHHHHHHHHHhCcchh
Confidence 99 99999999 6554 479999999999999997765543
No 6
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=99.96 E-value=1.8e-29 Score=251.59 Aligned_cols=157 Identities=24% Similarity=0.262 Sum_probs=141.0
Q ss_pred CCeeeCCeeEEEEEEEe-CCeEEEEEecccCCCCCCCcccccccccC-CCCcccccccchhhhhhccCceeeccceeEEe
Q 009537 1 MPVIKGSERYNCQVLCL-NRKIIMIRPKLWLANDGNYRELRWFTAWK-QKDQLEDFLLPHEISEALCQKSVPFGYGFIQF 78 (532)
Q Consensus 1 mPv~~~g~~YN~avvi~-~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~-~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~ 78 (532)
+|.+.++++||+++++. +| +++.|+|+||+ |.|.+||+||+ .. .+|++
T Consensus 87 ~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~----~~E~~~f~~G~~~~-------------------------~v~~~ 136 (262)
T 3ivz_A 87 TAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF----YREKFFFEPGDLGF-------------------------RVFDL 136 (262)
T ss_dssp EEEEETTEEEEEEEEEETTE-EEEEEECSSCC----GGGGGTCBCCCSCS-------------------------CEEEC
T ss_pred EEEeeCCcEEEEEEEEcCCe-eEEEEeecccC----CchhceEeCCCCCc-------------------------eEEEE
Confidence 35677889999999996 67 99999999995 58999999998 33 48999
Q ss_pred CCccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeecc
Q 009537 79 LDTAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGC 158 (532)
Q Consensus 79 ~~~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~ 158 (532)
++++||+.||||+||| ++.+.++++|||||++||+|+.. .|..+++++|.+|++++++||++|.+ +++.|+|+
T Consensus 137 ~~~~ig~~IC~D~~fp-e~~r~~~~~ga~li~~ps~~~~~-----~~~~~~~~rA~en~~~vv~~n~~G~~-~~~~~~G~ 209 (262)
T 3ivz_A 137 GFMKVGVMICFDWFFP-ESARTLALKGADVIAHPANLVMP-----YAPRAMPIRALENKVYTVTADRVGEE-RGLKFIGK 209 (262)
T ss_dssp SSCEEEECCGGGGGSH-HHHHHHHHTTCSEEEEEECCCSS-----CHHHHHHHHHHHHTCEEEEEECCSEE-TTEECCCC
T ss_pred CCEEEEEEEecCCCch-HHHHHHHHCCCCEEEEcCCCCch-----HHHHHHHHHHHhcCcEEEEECCCCcC-CCceEeee
Confidence 9999999999999999 78999999999999999999863 46788999999999999999999998 57889999
Q ss_pred EEEE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhcc
Q 009537 159 SCVV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGS 197 (532)
Q Consensus 159 S~I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~ 197 (532)
|+|+ |+|+++++++.++ .++++++||++.++..|.+
T Consensus 210 S~ii~p~G~il~~~~~~~---~~~~~~~id~~~~~~~R~~ 246 (262)
T 3ivz_A 210 SLIASPKAEVLSMASETE---EEVGVAEIDLSLVRNKRIN 246 (262)
T ss_dssp CEEECTTSCEEEECCSSC---CEEEEEECCHHHHHCCEEE
T ss_pred EEEECCCCCEeecCCCCC---ceEEEEEEcHHHHHHHhhc
Confidence 9999 9999999998764 3689999999999988865
No 7
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=99.96 E-value=1.3e-29 Score=255.94 Aligned_cols=166 Identities=18% Similarity=0.179 Sum_probs=137.5
Q ss_pred CeeeC-CeeEEEEEEEe-CCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeC
Q 009537 2 PVIKG-SERYNCQVLCL-NRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFL 79 (532)
Q Consensus 2 Pv~~~-g~~YN~avvi~-~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~ 79 (532)
|.+.+ +++||+++++. +|++++.|+|+||++. .|.+||+||+... .+|+++
T Consensus 104 ~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~---~E~~~f~~G~~~~------------------------~v~~~~ 156 (283)
T 3hkx_A 104 PGPEGPEQRGITAELADEHGEVLASYQKVQLYGP---EEKAAFVPGEQPP------------------------PVLSWG 156 (283)
T ss_dssp BCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH---HHHHHSCCCCSCC------------------------CEEEET
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc---CchhhccCCCCCc------------------------eEEEEC
Confidence 45554 78999999998 8999999999999742 6999999998631 389999
Q ss_pred CccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccE
Q 009537 80 DTAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCS 159 (532)
Q Consensus 80 ~~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S 159 (532)
++|||+.||||+||| ++.+.++++|||||++|++|+...+ ..|..+++++|.+|++++++||++|.+ +++.|+|.|
T Consensus 157 ~~~ig~~IC~D~~fp-e~~r~l~~~Ga~li~~ps~~~~~~~--~~~~~~~~~rA~en~~~vv~~n~~G~~-~~~~~~G~S 232 (283)
T 3hkx_A 157 GRQLSLLVCYDVEFP-EMVRAAAARGAQLVLVPTALAGDET--SVPGILLPARAVENGITLAYANHCGPE-GGLVFDGGS 232 (283)
T ss_dssp TEEEEECCGGGGGSH-HHHHHHHHTTCSEEEEECCCBSCCT--HHHHTHHHHHHHHHTCEEEEECBEEEE-TTEEEECCC
T ss_pred CEEEEEEEecCcCCH-HHHHHHHHCCCCEEEECCCCCCccc--HHHHHHHHHHHHHhCCEEEEEccccCC-CCeEEeeEE
Confidence 999999999999999 7899999999999999999987655 567889999999999999999999988 578899999
Q ss_pred EEE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCchh
Q 009537 160 CVV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQ 202 (532)
Q Consensus 160 ~I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~ 202 (532)
+|+ |+|+++++++ ++ +++++++||++.++..|...+.+.
T Consensus 233 ~ii~p~G~vl~~~~-~~---e~~l~a~id~~~~~~~R~~~~~~~ 272 (283)
T 3hkx_A 233 VVVGPAGQPLGELG-VE---PGLLVVDLPDQSQDAGSDSADYLQ 272 (283)
T ss_dssp EEECTTSCEEEECC-SS---CEEEEEEEEC----------CHHH
T ss_pred EEECCCCCEEEecC-CC---CeEEEEEECHHHHHHHHHhCChhH
Confidence 999 9999999997 54 479999999999999987655543
No 8
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=99.96 E-value=8.3e-29 Score=248.36 Aligned_cols=169 Identities=12% Similarity=0.098 Sum_probs=147.7
Q ss_pred eeeCCeeEEEEEEEe-CCeEEEEEecccC-----CCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeE
Q 009537 3 VIKGSERYNCQVLCL-NRKIIMIRPKLWL-----ANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFI 76 (532)
Q Consensus 3 v~~~g~~YN~avvi~-~GkIl~i~~K~hL-----~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~ 76 (532)
...++++||+++++. +|++++.|+|+|| |.+..|.|.+||+||+.. .+|
T Consensus 87 ~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~~-------------------------~v~ 141 (276)
T 2w1v_A 87 EEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSF-------------------------STF 141 (276)
T ss_dssp EEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCCC-------------------------CEE
T ss_pred ecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCCc-------------------------eeE
Confidence 345788999999997 8999999999999 655556899999999764 478
Q ss_pred EeCCccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeee
Q 009537 77 QFLDTAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFD 156 (532)
Q Consensus 77 ~~~~~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fd 156 (532)
+++++|||+.||||+||| +..+.++++|||||++||+|+...++ .+|..+++++|.+|++++++||++|.++++..|.
T Consensus 142 ~~~~~~ig~~ICyD~~fp-e~~r~~~~~ga~ll~~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~ 219 (276)
T 2w1v_A 142 DTPYCKVGLGICYDMRFA-ELAQIYAQRGCQLLVYPGAFNLTTGP-AHWELLQRARAVDNQVYVATASPARDDKASYVAW 219 (276)
T ss_dssp ECSSCEEEECCGGGGGCH-HHHHHHHHTTEEEEEEECCCCTTHHH-HHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCC
T ss_pred EeCCceEEEEEEeccccH-HHHHHHHHcCCCEEEECCcCCCcCCH-HHHHHHHHHHHHHcCcEEEEecccccCCCCceee
Confidence 999999999999999999 78899999999999999999876544 4577899999999999999999999886678899
Q ss_pred ccEEEE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCchh
Q 009537 157 GCSCVV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQ 202 (532)
Q Consensus 157 G~S~I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~ 202 (532)
|.|+|+ |+|+++++++. + .++++++||++.++..|...+.+.
T Consensus 220 G~S~ii~p~G~v~~~~~~-~---e~~l~~~id~~~~~~~R~~~~~~~ 262 (276)
T 2w1v_A 220 GHSTVVDPWGQVLTKAGT-E---ETILYSDIDLKKLAEIRQQIPILK 262 (276)
T ss_dssp CCCEEECTTSCEEEECCS-S---SEEEEEEEEHHHHHHHHHHSCGGG
T ss_pred eEeEEECCCCCEeEEcCC-C---CeEEEEEEcHHHHHHHHHhCChhH
Confidence 999999 99999999875 2 478999999999999997765543
No 9
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=99.95 E-value=3.4e-28 Score=245.46 Aligned_cols=164 Identities=17% Similarity=0.150 Sum_probs=140.1
Q ss_pred CeeEEEEEEEe-CCeEEEEEecccC-----CCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeCC
Q 009537 7 SERYNCQVLCL-NRKIIMIRPKLWL-----ANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFLD 80 (532)
Q Consensus 7 g~~YN~avvi~-~GkIl~i~~K~hL-----~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~~ 80 (532)
+++||+++++. +|++++.|+|+|| |+++.|.|.+||+||+.. .+|++++
T Consensus 107 ~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~~-------------------------~v~~~~~ 161 (291)
T 1f89_A 107 DKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKS-------------------------TTIDTKY 161 (291)
T ss_dssp CCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCCC-------------------------EEEEETT
T ss_pred CceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCCC-------------------------ceEecCC
Confidence 78999999997 8999999999999 434456899999999764 4899999
Q ss_pred ccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEE
Q 009537 81 TAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSC 160 (532)
Q Consensus 81 ~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~ 160 (532)
++||+.||||+||| +..+.++++|||||++|++|+...++ .+|..+++++|.+|++++++||++|.+.+...|.|.|+
T Consensus 162 ~~ig~~ICyD~~fp-e~~r~l~~~Ga~ll~~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ 239 (291)
T 1f89_A 162 GKFGVGICYDMRFP-ELAMLSARKGAFAMIYPSAFNTVTGP-LHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSI 239 (291)
T ss_dssp EEEEECCGGGGGCH-HHHHHHHHTTEEEEEEECCCBTTHHH-HHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCE
T ss_pred eeEEEEEecccCch-HHHHHHHhhCCCEEEECCcCCCCCcH-HHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEE
Confidence 99999999999999 78999999999999999999875544 45678999999999999999999996656788999999
Q ss_pred EE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCch
Q 009537 161 VV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSF 201 (532)
Q Consensus 161 I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~ 201 (532)
|+ |+|+++++++. +.++++++||++.++..|...+.+
T Consensus 240 ii~p~G~vl~~~~~----~e~~l~~~id~~~~~~~R~~~~~~ 277 (291)
T 1f89_A 240 VVDPRGKIVAEAGE----GEEIIYAELDPEVIESFRQAVPLT 277 (291)
T ss_dssp EECTTSCEEEECCS----SSEEEEEEECHHHHHHHHHHSCCC
T ss_pred EECCCCCEEEecCC----CCeEEEEEECHHHHHHHHHhCChh
Confidence 99 99999999864 247999999999999888665443
No 10
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=99.95 E-value=3e-28 Score=242.85 Aligned_cols=166 Identities=14% Similarity=0.087 Sum_probs=142.8
Q ss_pred CeeeCCeeEEEEEEEe-CCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeCC
Q 009537 2 PVIKGSERYNCQVLCL-NRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFLD 80 (532)
Q Consensus 2 Pv~~~g~~YN~avvi~-~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~~ 80 (532)
|...++++||+++++. +|+++ .|+|+||+++ +.|.+||+||+.. .+|++++
T Consensus 84 ~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~--~~E~~~f~~G~~~-------------------------~v~~~~~ 135 (266)
T 2e11_A 84 QLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF--GNEHLRYAAGRER-------------------------LCVEWKG 135 (266)
T ss_dssp EEEETTEEEEEEEEECTTSCEE-EEECSSCCGG--GTTTTTSBCCCSC-------------------------CCEEETT
T ss_pred eEccCCcEEEEEEEECCCCCEE-EEeeeccCCC--cChhhhccCCCCc-------------------------eEEEECC
Confidence 3456789999999995 89999 9999999875 4699999999754 4899999
Q ss_pred ccEEEeeecccCCCchHHHHHH---hC---CCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCcee
Q 009537 81 TAVAVEVCEELFTPIPPHADLA---LN---GVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLY 154 (532)
Q Consensus 81 ~~iG~eICeDlw~P~~~~~~la---l~---GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~ 154 (532)
+|||+.||||+||| ++.+.++ ++ |||+|++||+|+... ...|..+++++|.+|++++++||++|.+++++.
T Consensus 136 ~~ig~~ICyD~~fp-e~~r~~~~~~~~~~~ga~~i~~~s~w~~~~--~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~ 212 (266)
T 2e11_A 136 WRINPQVCYDLRFP-VFCRNRFDVERPGQLDFDLQLFVANWPSAR--AYAWKTLLRARAIENLCFVAAVNRVGVDGNQLH 212 (266)
T ss_dssp EEEEEEEGGGGGCT-TTTCCCBSSSSTTSBSCSEEEEEECCCGGG--HHHHHHHHHHHHHHTTSEEEEEECEEECTTSCE
T ss_pred EEEEEEEEeccCCH-HHHHHHHhhhhccCCCCcEEEEeCCCCCCc--hHHHHHHHHHHHHhcCcEEEEEcCCcCCCCCce
Confidence 99999999999999 5666654 54 999999999998653 346788999999999999999999998877788
Q ss_pred eeccEEEE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCchh
Q 009537 155 FDGCSCVV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQ 202 (532)
Q Consensus 155 fdG~S~I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~ 202 (532)
|.|.|+|+ |+|+++++++ ++ .++++++||++.++..|...+.+.
T Consensus 213 ~~G~S~ii~p~G~v~~~~~-~~---e~~l~~~id~~~~~~~R~~~~~~~ 257 (266)
T 2e11_A 213 YAGDSAVIDFLGQPQVEIR-EQ---EQVVTTTISAAALAEHRARFPAML 257 (266)
T ss_dssp EEEEEEEECTTSCEEEEEE-SS---CEEEEEEECHHHHHHHHHHSCGGG
T ss_pred EeeeEEEECCCCceeeecC-CC---CeEEEEEEcHHHHHHHHHhCChhh
Confidence 99999999 9999999987 54 479999999999999887655543
No 11
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=99.95 E-value=3.4e-28 Score=258.04 Aligned_cols=166 Identities=17% Similarity=0.173 Sum_probs=133.7
Q ss_pred CCeeEEEEEEEe-CCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeCCccEE
Q 009537 6 GSERYNCQVLCL-NRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFLDTAVA 84 (532)
Q Consensus 6 ~g~~YN~avvi~-~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~~~~iG 84 (532)
++++||+++++. +|++++.|+|+||+++|.|.|.+||++|+... .+|+++++|||
T Consensus 175 ~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~------------------------~vf~~~~~riG 230 (405)
T 2vhh_A 175 GETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGH------------------------PVFETEFGKLA 230 (405)
T ss_dssp TTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCC------------------------CEEEETTEEEE
T ss_pred CCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCC------------------------eeEEECCEEEE
Confidence 468999999998 89999999999999989999999999997521 48999999999
Q ss_pred EeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCC--------------
Q 009537 85 VEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDG-------------- 150 (532)
Q Consensus 85 ~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg-------------- 150 (532)
+.||||+||| +..+.++++|||||+|||+|+...+ ...|..+++++|.+|++++++||++|.+.
T Consensus 231 ~~ICyD~~fP-e~~r~la~~GAdill~psa~~~~~~-~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~~~~ 308 (405)
T 2vhh_A 231 VNICYGRHHP-QNWMMFGLNGAEIVFNPSATIGRLS-EPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAH 308 (405)
T ss_dssp ECCGGGGGCH-HHHHHHHHTTCSEEEEEECCBCTTT-HHHHHHHHHHHHHHHTSEEEEEECEECCCCC------------
T ss_pred EEEeccccCh-HHHHHHHHcCCCEEEEcccCCCCCC-HHHHHHHHHHHHHHcCceEEEeccccccccccccccccCcccc
Confidence 9999999999 6788999999999999999976544 34677889999999999999999999762
Q ss_pred -CceeeeccEEEE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCc
Q 009537 151 -GRLYFDGCSCVV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISS 200 (532)
Q Consensus 151 -~~l~fdG~S~I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s 200 (532)
+...|.|.|+|+ |+|+++++++.++ .++++++||++.++..|..++.
T Consensus 309 ~~~~~f~G~S~IidP~G~vla~~~~~~---e~il~aeiDl~~~~~~R~~~p~ 357 (405)
T 2vhh_A 309 KEFGPFYGSSYVAAPDGSRTPSLSRDK---DGLLVVELDLNLCRQVKDFWGF 357 (405)
T ss_dssp -----EECCCCCBCTTSCBCCCCCSSS---CEEEEEEEETTHHHHHHHHHCT
T ss_pred ccCceeccccceECCCCCEeeccCCCC---CeEEEEEECHHHHHHHHHhCCc
Confidence 235789999999 9999999988764 3799999999999998866443
No 12
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=99.95 E-value=3.7e-27 Score=238.76 Aligned_cols=165 Identities=19% Similarity=0.267 Sum_probs=138.7
Q ss_pred eeEEEEEEEe-CCeEEEEEecccCCCCCC------C--cccccccccC-CCCcccccccchhhhhhccCceeeccceeEE
Q 009537 8 ERYNCQVLCL-NRKIIMIRPKLWLANDGN------Y--RELRWFTAWK-QKDQLEDFLLPHEISEALCQKSVPFGYGFIQ 77 (532)
Q Consensus 8 ~~YN~avvi~-~GkIl~i~~K~hL~~~g~------~--~E~R~Ftpg~-~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~ 77 (532)
++||+++++. +|++++.|+|+|||+++. | .|.+||+||+ .. .+|+
T Consensus 106 ~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~-------------------------~v~~ 160 (303)
T 1uf5_A 106 RRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGF-------------------------PVYD 160 (303)
T ss_dssp EEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCS-------------------------CEEE
T ss_pred ceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCCC-------------------------ceEe
Confidence 7999999998 599999999999985443 3 6999999997 43 4899
Q ss_pred eCCccEEEeeecccCCCchHHHHHHhCCCeEEEE---ccCCCccCC-----cHHHHHHHHHHHHHHhCCeEEEEcCCcCC
Q 009537 78 FLDTAVAVEVCEELFTPIPPHADLALNGVEVFMN---ASGSHHQLR-----KLDYRIRAFISATHSRGGVYMYSNQQGCD 149 (532)
Q Consensus 78 ~~~~~iG~eICeDlw~P~~~~~~lal~GaeIIln---pSaS~~~~~-----k~~~r~~li~~~a~~~g~~yvyaN~~G~d 149 (532)
++++|||+.||||+||| +..+.++++|||||++ +++++...+ ....|..+.+++|.+|++++++||++|.+
T Consensus 161 ~~~~~ig~~ICyD~~fp-e~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~ 239 (303)
T 1uf5_A 161 VDAAKMGMFIANDRRWP-EAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGME 239 (303)
T ss_dssp ETTEEEEECCGGGGGCH-HHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEEE
T ss_pred cCCceEEEEEecCccCH-HHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECccccc
Confidence 99999999999999999 7889999999999955 455544432 34556778999999999999999999987
Q ss_pred CCceeeeccEEEE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhcc-CCchh
Q 009537 150 GGRLYFDGCSCVV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGS-ISSFQ 202 (532)
Q Consensus 150 g~~l~fdG~S~I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~-~~s~~ 202 (532)
+...|.|+|+|+ |+|+++++.+.++ .++++++||++.++..|.. .+.+.
T Consensus 240 -~~~~~~G~S~ii~p~G~vl~~~~~~~---~~~l~~~id~~~~~~~R~~~~~~~~ 290 (303)
T 1uf5_A 240 -ENCMLLGHSCIVAPTGEIVALTTTLE---DEVITAAVDLDRCRELREHIFNFKQ 290 (303)
T ss_dssp -TTEEECCCCEEECTTSCEEEECCSSS---SEEEEEEEEGGGGHHHHTTTTCHHH
T ss_pred -CCccccceeEEECCCCCEeccCCCCC---CcEEEEEEcHHHHHHHHhhcccchh
Confidence 456799999999 9999999988664 3689999999999999976 55443
No 13
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=99.94 E-value=8.2e-27 Score=241.91 Aligned_cols=153 Identities=17% Similarity=0.186 Sum_probs=136.2
Q ss_pred eeEEEEEEEe-CCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEe-CCccEEE
Q 009537 8 ERYNCQVLCL-NRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQF-LDTAVAV 85 (532)
Q Consensus 8 ~~YN~avvi~-~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~-~~~~iG~ 85 (532)
++||+++++. +|+|++.|+|+||+ .|.++|+||+.. .+|++ .+.|||+
T Consensus 114 ~~yNsa~vi~p~G~i~~~Y~K~hlf-----~e~~~f~pG~~~-------------------------~v~~~~~G~riG~ 163 (341)
T 2uxy_A 114 APYNTLVLIDNNGEIVQKYRKIIPW-----CPIEGWYPGGQT-------------------------YVSEGPKGMKISL 163 (341)
T ss_dssp CCEEEEEEECTTSCEEEEEECSSCC-----TTTCCCBCCCCC-------------------------CCEECGGGCEEEE
T ss_pred ceEEEEEEECCCCcEEEEEEeeccC-----CCccceeCCCCc-------------------------eEEECCCCCEEEE
Confidence 4999999998 89999999999984 477899999765 37888 5679999
Q ss_pred eeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEEEE-eC
Q 009537 86 EVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSCVV-VN 164 (532)
Q Consensus 86 eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~I~-~n 164 (532)
.||||+||| ++.+.++++|||||++||+|++ .+..+|..+++++|.+|++++++||++|.+ +.+.|+|.|+|+ |+
T Consensus 164 ~ICyD~~fp-e~~r~l~~~Gadlll~psa~~~--~~~~~~~~l~~arA~En~~~vv~an~~G~~-~~~~~~G~S~Iidp~ 239 (341)
T 2uxy_A 164 IIXDDGNYP-EIWRDCAMKGAELIVRCQGYMY--PAKDQQVMMAKAMAWANNCYVAVANAAGFD-GVYSYFGHSAIIGFD 239 (341)
T ss_dssp EEGGGGGSH-HHHHHHHHTTCSEEEEEECCBT--TCHHHHHHHHHHHHHHHTCEEEEEECEEEC-SSCEEECCCEEECTT
T ss_pred EEccCCcCc-HHHHHHHHcCCCEEEEcCCCCC--CcHHHHHHHHHHHHHhCCcEEEEECCCCCC-CCceeeeEEEEECCC
Confidence 999999999 7899999999999999999976 456788999999999999999999999988 567899999999 99
Q ss_pred CcEEEecCCCCcCceeEEEEEEecchhhhhhcc
Q 009537 165 GDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGS 197 (532)
Q Consensus 165 G~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~ 197 (532)
|+++++++.|+ .++++++||++.++..|..
T Consensus 240 G~vla~~~~~~---e~il~a~id~~~~~~~R~~ 269 (341)
T 2uxy_A 240 GRTLGECGEEE---MGIQYAQLSLSQIRDARAN 269 (341)
T ss_dssp SCEEEECCSCT---TCEEEEEEEHHHHHHHHHH
T ss_pred CCEEEECCCCC---CEEEEEEEcHHHHHHHHhh
Confidence 99999998764 3689999999999877754
No 14
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=99.93 E-value=3.9e-26 Score=236.14 Aligned_cols=157 Identities=20% Similarity=0.195 Sum_probs=137.0
Q ss_pred eEEEEEEEe-CCeEEEEEecccCCCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEe-CCccEEEe
Q 009537 9 RYNCQVLCL-NRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQF-LDTAVAVE 86 (532)
Q Consensus 9 ~YN~avvi~-~GkIl~i~~K~hL~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~-~~~~iG~e 86 (532)
+||+++++. +|+|++.|+|+||+ .|.++|+||+... .+|++ .+.|||+.
T Consensus 114 ~yNsa~vi~p~G~i~~~YrK~hlf-----~e~~~f~~G~~~~------------------------~v~~~~~g~~iG~~ 164 (334)
T 2dyu_A 114 PYNTAIIIDPQGEIILKYRKLFPW-----NPIEPWYPGDLGM------------------------PVCEGPGGSKLAVC 164 (334)
T ss_dssp CEEEEEEECTTSCEEEEEECSSCC-----TTTCCCCCCCSCC------------------------CCEECGGGCEEEEE
T ss_pred eEEEEEEECCCCCEEEEEeeccCC-----CCcccCcCCCCCc------------------------eeEECCCCCEEEEE
Confidence 999999998 89999999999975 4678899987541 27887 56799999
Q ss_pred eecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEEEE-eCC
Q 009537 87 VCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSCVV-VNG 165 (532)
Q Consensus 87 ICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~I~-~nG 165 (532)
||+|+||| ++.+.++++|||||++||+|+... ..+|..+++++|.+|++++++||++|.+ +...|.|.|+|+ |+|
T Consensus 165 ICyD~~fp-e~~r~~~~~Gadlil~psaw~~~~--~~~~~~~~~arA~En~~~vv~an~~G~~-~~~~~~G~S~Iidp~G 240 (334)
T 2dyu_A 165 ICHDGMIP-ELAREAAYKGCNVYIRISGYSTQV--NDQWILTNRSNAWHNLMYTVSVNLAGYD-NVFYYFGEGQICNFDG 240 (334)
T ss_dssp EGGGGGCH-HHHHHHHHTTCSEEEEEESSCTTS--HHHHHHHHHHHHHHHTCEEEEEECSBSS-SSCCCCCEEEEECTTS
T ss_pred EECCCCch-HHHHHHHHcCCCEEEEeCCCCCCc--HHHHHHHHHHHHHhCCCEEEEECCCcCC-CCeeeeeEEEEECCCC
Confidence 99999999 789999999999999999997643 4578889999999999999999999988 567899999999 999
Q ss_pred cEEEecCCCCcCceeEEEEEEecchhhhhhccCCch
Q 009537 166 DMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSF 201 (532)
Q Consensus 166 ~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~ 201 (532)
+++++++.++ .++++++||++.++..|...+..
T Consensus 241 ~vla~~~~~~---e~il~a~idl~~~~~~R~~~~~~ 273 (334)
T 2dyu_A 241 TTLVQGHRNP---WEIVTGEIYPKMADNARLSWGLE 273 (334)
T ss_dssp CEEEECCCCT---TCEEEEEECHHHHHHHHHHCSTT
T ss_pred CEeeecCCCC---CeEEEEEEcHHHHHHHHhhCchh
Confidence 9999998764 37899999999999998765543
No 15
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.93 E-value=8.9e-27 Score=248.77 Aligned_cols=167 Identities=16% Similarity=0.102 Sum_probs=144.4
Q ss_pred CCeeEEEEEEEe-CCeEEEEEecccC-----CCCCCCcccccccccCCCCcccccccchhhhhhccCceeeccceeEEeC
Q 009537 6 GSERYNCQVLCL-NRKIIMIRPKLWL-----ANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSVPFGYGFIQFL 79 (532)
Q Consensus 6 ~g~~YN~avvi~-~GkIl~i~~K~hL-----~~~g~~~E~R~Ftpg~~~~~~e~~~lp~~i~~~~~q~~vPfGd~v~~~~ 79 (532)
++++||+++++. +|++++.|+|+|| |++..|.|.+||+||+... .+|+++
T Consensus 105 ~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~~~------------------------~~~~~~ 160 (440)
T 1ems_A 105 AAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMI------------------------PPVDTP 160 (440)
T ss_dssp EEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCC------------------------CCEEET
T ss_pred CCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCCCc------------------------eeEECC
Confidence 468999999996 8999999999999 4444578999999998652 138999
Q ss_pred CccEEEeeecccCCCchHHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccE
Q 009537 80 DTAVAVEVCEELFTPIPPHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCS 159 (532)
Q Consensus 80 ~~~iG~eICeDlw~P~~~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S 159 (532)
+++||+.||||+||| +..+.++++|||||++||+|+...++ ..|..+++++|.+|++++++||++|.+++...|.|.|
T Consensus 161 ~~~iG~~ICyD~~fp-e~~r~l~~~Ga~il~~psa~~~~~~~-~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S 238 (440)
T 1ems_A 161 IGRLGLSICYDVRFP-ELSLWNRKRGAQLLSFPSAFTLNTGL-AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHS 238 (440)
T ss_dssp TEEECCCCGGGGGCH-HHHHHHHHTTCSEEECCBCCCHHHHH-HHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCC
T ss_pred CeeEEEEEeccccCh-HHHHHHHHcCCcEEEECCcCCCCCcH-HHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeee
Confidence 999999999999999 78999999999999999999876544 3677899999999999999999999875668899999
Q ss_pred EEE-eCCcEEEecCCCCcCceeEEEEEEecchhhhhhccCCchh
Q 009537 160 CVV-VNGDMIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQ 202 (532)
Q Consensus 160 ~I~-~nG~ilaq~~~f~~~d~evi~a~VDl~~vr~~R~~~~s~~ 202 (532)
+|+ |+|+++++++. +.++++++||++.++..|...+.+.
T Consensus 239 ~ii~P~G~vla~~~~----~e~il~a~idl~~~~~~R~~~~~~~ 278 (440)
T 1ems_A 239 MVVDPWGAVVAQCSE----RVDMCFAEIDLSYVDTLREMQPVFS 278 (440)
T ss_dssp EEECTTSCEEEECCS----SSCEEEEEEEHHHHHHHHHHSCGGG
T ss_pred EEECCCCCeeccCCC----CCcEEEEEeCHHHHHHHHHhCChhh
Confidence 999 99999999863 2479999999999999987665543
No 16
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=99.90 E-value=1.9e-24 Score=218.33 Aligned_cols=162 Identities=22% Similarity=0.257 Sum_probs=121.0
Q ss_pred CCcHHHHHhhHHHHHHHHHHHhC-CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCC
Q 009537 239 HSPEEEIAFGPGCWLWDYLRRSG-ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPT 317 (532)
Q Consensus 239 ~~peeei~~~~a~~L~dylrrs~-~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~ 317 (532)
..|+++|.. +++||||||+++| .++++|+||||+|||++|+|+. +++++ ++.+..
T Consensus 17 ~~~~~~i~~-~~~~L~~~l~~~g~~~~vvvglSGGvDSsv~a~L~~----~a~~~--------------lg~~~~----- 72 (275)
T 1wxi_A 17 INAEEEIRR-SVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQ----MAINE--------------LRLETG----- 72 (275)
T ss_dssp CCHHHHHHH-HHHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHH----HHHHH--------------HHHHHC-----
T ss_pred CCHHHHHHH-HHHHHHHHHHHcCCCCCEEEECcCcHHHHHHHHHHH----HHHHH--------------hccccc-----
Confidence 366777777 6999999999999 9999999999999999988764 22333 221100
Q ss_pred chhhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCC-ceEEEechHHHHHHHHHhhhhhCCCCCCc-------------
Q 009537 318 ESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGS-WHLDVSIDTVVSAFLSLFQTLTGKRPRYK------------- 383 (532)
Q Consensus 318 ~~~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~-~h~~i~Id~~v~a~~~~f~~~~g~~p~~~------------- 383 (532)
+ -+..+++++|+. +++.+.++|+++|+.||+ +|+++||+++++++.+.+.. .|.+|+..
T Consensus 73 --~--~~~~v~av~~~~--~~~~~~~dA~~va~~lgi~~~~~i~i~~~~~~~~~~l~~-~g~~~~~~~~~N~~aR~r~~~ 145 (275)
T 1wxi_A 73 --N--ESLQFIAVRLPY--GVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALRE-AGIELSDFVRGNEKARERMKA 145 (275)
T ss_dssp --C--TTCEEEEEECCS--SSCTTHHHHHHHHHHHCCSEEEECCCHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHH
T ss_pred --c--ccceEEEEEeCC--CCccCHHHHHHHHHHcCCCeEEEEecHHHHHHHHHHHHh-cCCCCCCchhhhhhhhHHHHH
Confidence 0 001489999994 345579999999999999 99999999999988766654 34433211
Q ss_pred ----------------------------------------------------------------------------chhh
Q 009537 384 ----------------------------------------------------------------------------LDEV 387 (532)
Q Consensus 384 ----------------------------------------------------------------------------tDE~ 387 (532)
+||+
T Consensus 146 l~~~A~~~g~lvlgTgn~~E~~~Gy~t~~gd~~~~~~PL~~l~K~eVr~la~~lglp~~i~~k~psa~L~~~~~~q~De~ 225 (275)
T 1wxi_A 146 QYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDRPSLPDEV 225 (275)
T ss_dssp HHHHHHHTTEEEBCCCCHHHHTTTCSCTTTTTCCSBCTTTTCCHHHHHHHHHHTTCCGGGTSCC-------------CHH
T ss_pred HHHHHHHCCCEEEECccHHHHccCcccccCCCccceeeccCCCHHHHHHHHHHhCCcHhhccCCCCCcccCCCCCCCCHH
Confidence 8999
Q ss_pred hcCCCEeeeceeeEEEeecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccc
Q 009537 388 DMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYH 456 (532)
Q Consensus 388 dmGmtY~~L~~~~rlr~~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h 456 (532)
+|||||++||.|++.+ ..+ .+++++| .++|.+|+||| ++||++|
T Consensus 226 ~lg~~Y~~lD~~l~~~--------------------~~~-~~~~~~i---~~~~~~~~~Kr-~~p~~~~ 269 (275)
T 1wxi_A 226 ALGVTYDNIDDYLEGK--------------------NVP-QQVARTI---ENWYLKTEHKR-RPPITVF 269 (275)
T ss_dssp HHSSCHHHHHHHHTTC--------------------CCC-HHHHHHH---HHHHHHTGGGG-SSCCCTT
T ss_pred HhCCCHHHHHHHHHhc--------------------CCC-HHHHHHH---HHHHHHhHHhc-CCCCCCc
Confidence 9999999999998731 133 3445544 56999999999 8899876
No 17
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=99.90 E-value=8.1e-24 Score=213.14 Aligned_cols=160 Identities=27% Similarity=0.396 Sum_probs=121.1
Q ss_pred CcHHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCch
Q 009537 240 SPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTES 319 (532)
Q Consensus 240 ~peeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~ 319 (532)
++++++.. +++||+||+++++.++++|+||||+|||++|+|+. ++.++ ++.+..
T Consensus 17 ~~~~~i~~-~~~~L~d~v~~~g~~~vvvgLSGGvDSsv~a~La~----~a~~~--------------lg~~~~------- 70 (271)
T 1kqp_A 17 DPKQEIED-RVNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQ----LAVES--------------IREEGG------- 70 (271)
T ss_dssp CHHHHHHH-HHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHH----HHHHH--------------HHHTTC-------
T ss_pred CHHHHHHH-HHHHHHHHHHHcCCCCEEEECCCCHHHHHHHHHHH----HHHHH--------------hcccCC-------
Confidence 56666666 79999999999999999999999999999988874 22333 332200
Q ss_pred hhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCC-ceEEEechHHHHHHHHHhhhhhCCCCCCc---------------
Q 009537 320 REFAKRIFYTVFMGSENSSQETRMRAKKLADEIGS-WHLDVSIDTVVSAFLSLFQTLTGKRPRYK--------------- 383 (532)
Q Consensus 320 ~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~-~h~~i~Id~~v~a~~~~f~~~~g~~p~~~--------------- 383 (532)
+..+++++|+. +++.+.++|+++|+.||+ +|++++|+++++++.+.+...+|.++...
T Consensus 71 ----~~~v~av~~~~--~~~~d~~~A~~va~~lgi~~~~~i~i~~~~~~~~~~l~~~~~~~~~~~~~~N~~aR~r~~~l~ 144 (271)
T 1kqp_A 71 ----DAQFIAVRLPH--GTQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQY 144 (271)
T ss_dssp ----CCEEEEEECCS--SSCTTHHHHHHHHHHHCCSEEEECCCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ----CceEEEEEeCC--CCCCCHHHHHHHHHhcCCCeEEEeccHHHHHHHHHHHhhhcCCCCcchhhhhHHHHHHHHHHH
Confidence 01489999984 334568999999999999 99999999999888766655444433211
Q ss_pred --------------------------------------------------------------------------chhhhc
Q 009537 384 --------------------------------------------------------------------------LDEVDM 389 (532)
Q Consensus 384 --------------------------------------------------------------------------tDE~dm 389 (532)
+||++|
T Consensus 145 ~~A~~~g~lvl~tgn~~E~~~Gy~t~~gd~~~~~~Pl~~l~K~eVr~la~~lglp~~i~~k~psa~L~~~~~~q~De~~l 224 (271)
T 1kqp_A 145 AIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGAPERLYLKEPTADLLDEKPQQSDETEL 224 (271)
T ss_dssp HHHHHHTCEEBCCCCHHHHTTTCSCTTTTTCCSBCTTTTCCHHHHHHHHHHTTCCTHHHHSCCBCCCCSSSTTCBHHHHH
T ss_pred HHHHHCCCEEEECccHHHhccCCccccccccccccccccCCHHHHHHHHHHcCCCHhhccCCCCcccccCCCCCCCHHHh
Confidence 899999
Q ss_pred CCCEeeeceeeEEEeecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccc
Q 009537 390 GMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYH 456 (532)
Q Consensus 390 GmtY~~L~~~~rlr~~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h 456 (532)
||||++||.|++.+ ..+ .+ .++++.++|.+|+||| ++||.+|
T Consensus 225 g~~Y~~ld~~l~~~--------------------~~~-~~---~~~~v~~~~~~~~~Kr-~~p~~~~ 266 (271)
T 1kqp_A 225 GISYDEIDDYLEGK--------------------EVS-AK---VSEALEKRYSMTEHKR-QVPASMF 266 (271)
T ss_dssp SSCHHHHHHHHTTC--------------------CCC-HH---HHHHHHHHHHHTGGGG-SSCBCTT
T ss_pred CCCHHHHHHHHHhc--------------------CCC-HH---HHHHHHHHHHHhHHhc-CCCCCCc
Confidence 99999999998731 133 33 4455667999999999 7899775
No 18
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=99.88 E-value=1e-22 Score=204.35 Aligned_cols=175 Identities=19% Similarity=0.146 Sum_probs=134.7
Q ss_pred HHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhh
Q 009537 242 EEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESRE 321 (532)
Q Consensus 242 eeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e 321 (532)
.+++...+.+||+||+++++.++++|+||||+||+++|+++. ++ . +.
T Consensus 5 ~~~~~~~l~~~l~~~v~~~~~~~vvv~lSGGiDSsv~~~l~~-------~~--------------~-~~----------- 51 (268)
T 1xng_A 5 YQKLIVYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQ-------KV--------------F-KE----------- 51 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHH-------HH--------------H-GG-----------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEccCcHHHHHHHHHHH-------Hh--------------C-CC-----------
Confidence 478899999999999999999999999999999999999874 43 2 12
Q ss_pred ccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhh-----------------------hh---
Q 009537 322 FAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQ-----------------------TL--- 375 (532)
Q Consensus 322 ~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~-----------------------~~--- 375 (532)
.+++++|++..++.++.++|+++|+.+|++|..++|+++++++...+. ..
T Consensus 52 ----~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~i~~~~~~~~~~~~~~~~~~~~n~~~r~R~~~l~~~A~~~g~ 127 (268)
T 1xng_A 52 ----NAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKSDS 127 (268)
T ss_dssp ----GEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ----CEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEeChHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHCCC
Confidence 389999999888899999999999999999999999987665432211 00
Q ss_pred ----h--------CCCCCC-----------c--------------------------------chhhhcCCCEeeeceee
Q 009537 376 ----T--------GKRPRY-----------K--------------------------------LDEVDMGMTYEELSVYG 400 (532)
Q Consensus 376 ----~--------g~~p~~-----------~--------------------------------tDE~dmGmtY~~L~~~~ 400 (532)
| |....+ . +||++||++|++|+.|+
T Consensus 128 ~vl~tg~~~E~~~Gy~t~~gd~~~~i~PL~~l~K~ev~~la~~~gip~~i~~k~psa~l~~~q~de~~lg~~y~~ld~~l 207 (268)
T 1xng_A 128 LVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLNIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLL 207 (268)
T ss_dssp EEBCCCCHHHHHHTCSCTTTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHTSCCCCCSSTTCCHHHHHSSCHHHHHHHH
T ss_pred EEEECCcHHHHhcCcccccCCCCeeEEecCCCCHHHHHHHHHHcCCcHHHhcCCCCcCcCCCCcchhhcCCCHHHHHHHH
Confidence 1 110000 0 89999999999999999
Q ss_pred EEE---eec-CCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccccccCCCCCC
Q 009537 401 RLR---KIF-HCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDN 465 (532)
Q Consensus 401 rlr---~~~-~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h~e~ys~ddn 465 (532)
+.+ ... +++|.++..+ ++++ +.|++|+++|.+|||||+ +||+++..+..+..+
T Consensus 208 ~~~~~~~~~~~~~~~~i~~~-------~~~~----~~~~~~~~~~~~~~~kr~-~~~~~~~~~~~~~~~ 264 (268)
T 1xng_A 208 KDIEALFQTKPIDTETLAQL-------GYDE----ILVKNITSRIQKNAFKLE-LPAIAKRFNPELEHH 264 (268)
T ss_dssp HHHHHHSSSSCCCHHHHHHT-------TCCH----HHHHHHHHHHHHTGGGGS-CCEECCCC-------
T ss_pred HHHHHHhhccCCCHHHHHHc-------CCCH----HHHHHHHHHHHHhHhccc-CCCCccccchhhccc
Confidence 987 344 3778877763 3564 559999999999999998 899999988777654
No 19
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=99.87 E-value=1e-22 Score=205.79 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=79.7
Q ss_pred CCcHHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCc
Q 009537 239 HSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTE 318 (532)
Q Consensus 239 ~~peeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~ 318 (532)
+.|+++|.. ..+||+|||+++|.++++|+||||+||+++|+|+. +++++ ++.+. -|.
T Consensus 18 ~~~~~~i~~-~v~~L~d~l~~~g~~~vvvglSGGvDSal~a~l~~----~A~~~--------------Lg~~~---~~~- 74 (279)
T 3q4g_A 18 IDPQFEIER-RVAFIKRKLTEARYKSLVLGISGGVDSTTCGRLAQ----LAVEE--------------LNQQH---NTT- 74 (279)
T ss_dssp CCHHHHHHH-HHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHH----HHHHH--------------HHHHT---TCS-
T ss_pred CCHHHHHHH-HHHHHHHHHHHcCCCCEEEEccCCHHHHHHHHHHH----HHHHH--------------hCccc---ccC-
Confidence 356666665 56999999999999999999999999999988763 33444 33220 000
Q ss_pred hhhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCC-ceEEEechHHHHHHHH
Q 009537 319 SREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGS-WHLDVSIDTVVSAFLS 370 (532)
Q Consensus 319 ~~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~-~h~~i~Id~~v~a~~~ 370 (532)
+..++++.|+. +++.+.++|+.+|+.||+ +|++|||+++++++..
T Consensus 75 -----~~~v~av~~p~--~~~~~~~~A~~~a~~lgi~~~~~i~i~~~~~~~~~ 120 (279)
T 3q4g_A 75 -----EYQFIAVRLPY--GEQKDEDEAQLALSFIRPTHSVSVNIKAGVDGLHA 120 (279)
T ss_dssp -----CCEEEEEECCS--SSCSCHHHHHHHHHHHCCSEEEECCCHHHHHHHHH
T ss_pred -----CceEEEEEecC--CChHHHHHHHHHHHHhCCCeEEEEECHHHHHHHHH
Confidence 11589999993 456678999999999999 9999999999999876
No 20
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=99.86 E-value=5.9e-22 Score=197.32 Aligned_cols=162 Identities=19% Similarity=0.220 Sum_probs=119.1
Q ss_pred cHHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchh
Q 009537 241 PEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESR 320 (532)
Q Consensus 241 peeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~ 320 (532)
..++++..+.+||+||++++|.++++|+||||+||+++|+|+. ++ ++ .
T Consensus 5 ~~~~~~~~l~~~l~d~v~~~g~~~vvv~lSGGiDSsv~a~l~~-------~~--------------~g-~---------- 52 (249)
T 3p52_A 5 DWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCK-------RA--------------LK-E---------- 52 (249)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHH-------HH--------------HT-T----------
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHH-------HH--------------cC-C----------
Confidence 4589999999999999999999999999999999999999884 44 34 2
Q ss_pred hccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhh-----------------------hhhC
Q 009537 321 EFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQ-----------------------TLTG 377 (532)
Q Consensus 321 e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~-----------------------~~~g 377 (532)
.+++++|++..+++++.++|+++|+.+|+.|+.++|+++++++...+. ...|
T Consensus 53 -----~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~i~~~~~~~~~~~~~~~~~~~~n~~~r~R~~~l~~~A~~~g 127 (249)
T 3p52_A 53 -----NVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSILDAFIKQSENTTLVSLGNFAARIRMSLLYDYSALKN 127 (249)
T ss_dssp -----SEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECCCHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----cEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECcHHHHHHHHhccccCCccHhHHHHHHHHHHHHHHHHHCC
Confidence 389999999888889999999999999999999999998876643110 0001
Q ss_pred ---------------CC-----------CCCc--------------------------------chhhhcCCCEeeecee
Q 009537 378 ---------------KR-----------PRYK--------------------------------LDEVDMGMTYEELSVY 399 (532)
Q Consensus 378 ---------------~~-----------p~~~--------------------------------tDE~dmGmtY~~L~~~ 399 (532)
.. |-.. +||++|||||++||.|
T Consensus 128 ~~vl~tgn~se~~~g~~t~~gd~~~~i~PL~~l~K~eV~~la~~~gip~~i~~k~psa~L~~~q~de~~lg~~y~~ld~~ 207 (249)
T 3p52_A 128 SLVIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIYALAKYLNLHENFIKKAPSADLWENQSDEADLGFSYTKIDEG 207 (249)
T ss_dssp EEEBCCCCHHHHHHTCSCTTTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHHC-----------------CCCCHHHHH
T ss_pred CeEEeCCCHHHHHccchhhhccccCccccccCCcHHHHHHHHHHcCCcHHhcCCCCCcccCCCCCCHHHcCCCHHHHHHH
Confidence 00 0000 8999999999999999
Q ss_pred eEEEeecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCccc
Q 009537 400 GRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSY 455 (532)
Q Consensus 400 ~rlr~~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~ 455 (532)
.+.. .++.++- .. ++++ +.|+++.+++.+|+|||. +||..
T Consensus 208 l~~~----~~~~~~~-~~------~~~~----~~~~~i~~~~~~~~~kr~-~p~~~ 247 (249)
T 3p52_A 208 LKAL----ETNDEKL-LR------TLDP----SLIAMLKNRMQKNAFKGK-MPEIL 247 (249)
T ss_dssp HHHH----HTTCHHH-HH------HSCH----HHHHHHHHHHHHTGGGGS-CCEEC
T ss_pred HHHc----cChHHHH-Hc------CCCH----HHHHHHHHHHHhhhhccC-CCCCC
Confidence 8754 2333432 11 2453 678888899999999996 77754
No 21
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=99.84 E-value=3e-21 Score=192.27 Aligned_cols=168 Identities=20% Similarity=0.234 Sum_probs=129.6
Q ss_pred HHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhh
Q 009537 242 EEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESRE 321 (532)
Q Consensus 242 eeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e 321 (532)
.+++...+..||++| +.++++|+||||+||+++|+|+. ++ .+..
T Consensus 6 ~~~~~~~l~~~i~~~----~~~~vvv~lSGGiDSs~~~~l~~-------~~--------------~g~~----------- 49 (257)
T 2e18_A 6 YDKVIERILEFIREK----GNNGVVIGISGGVDSATVAYLAT-------KA--------------LGKE----------- 49 (257)
T ss_dssp HHHHHHHHHHHHHHH----CTTCEEEECCSSHHHHHHHHHHH-------HH--------------HCGG-----------
T ss_pred HHHHHHHHHHHHHHh----CCCcEEEEecCCHHHHHHHHHHH-------Hh--------------cCCC-----------
Confidence 367888999999999 78899999999999999999874 44 3322
Q ss_pred ccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhhh---------------------------
Q 009537 322 FAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQT--------------------------- 374 (532)
Q Consensus 322 ~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~~--------------------------- 374 (532)
.+++++|++.. + ++.++|+++|+.+|++|++++|+++++++...+..
T Consensus 50 ----~v~av~~~~~~-~-~~~~~a~~~a~~lgi~~~~i~i~~~~~~~~~~l~~~~~~~~~~n~~ar~r~~~l~~~A~~~g 123 (257)
T 2e18_A 50 ----KVLGLIMPYFE-N-KDVEDAKLVAEKLGIGYKVINIKPIVDSFVENLELNLDRKGLGNIMSRTRMIMLYAHANSLG 123 (257)
T ss_dssp ----GEEEEECCSSC-S-THHHHHHHHHHHHTCEEEECCCHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----cEEEEEeCCCC-c-hHHHHHHHHHHHhCCCEEEEEChHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHcC
Confidence 38999999874 4 88999999999999999999999876554322110
Q ss_pred ----hhCC--------C-----------CCCc--------------------------------chhhhcCCCEeeecee
Q 009537 375 ----LTGK--------R-----------PRYK--------------------------------LDEVDMGMTYEELSVY 399 (532)
Q Consensus 375 ----~~g~--------~-----------p~~~--------------------------------tDE~dmGmtY~~L~~~ 399 (532)
.||. . |... +||++||++|++|+.|
T Consensus 124 ~~vl~tg~~~e~~~Gy~t~~g~~~~~i~Pl~~l~K~ev~~la~~~gip~~i~~~~ps~~l~~~q~de~~lg~~y~~ld~~ 203 (257)
T 2e18_A 124 RIVLGTSNRSEFLTGYFTKWGDGASDYAPIINLYKTEVWEIAKRIGVPERIVKKKPSAGLWEGQTDEDELGISYNLLDEI 203 (257)
T ss_dssp CEEECCCCHHHHHHTCSCTTSTTCSSBCTTTTSCHHHHHHHHHHHTCCHHHHHSCCCCCSSTTCCHHHHHTSCHHHHHHH
T ss_pred CEEEEcCchhHHhcCCeeccCCCccCEeecCCCcHHHHHHHHHHcCCCHHHhCCCCCCCcCCCCcCHhhcCCCHHHHHHH
Confidence 0111 0 1000 8999999999999999
Q ss_pred eEEEeecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccccccCCC
Q 009537 400 GRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSP 462 (532)
Q Consensus 400 ~rlr~~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h~e~ys~ 462 (532)
++.....+++|.++.... ++++ +.|++|+++|.+|||||+ ++|.+|..+.|.
T Consensus 204 l~~~~~~~~~~~~i~~~~------~~~~----~~~~~~~~~~~~~~~kr~-~~~~~~~~~~~~ 255 (257)
T 2e18_A 204 LWRMIDLKIGKEEIAKDL------GIPL----SLVERVEELIKKSEHKRR-LPIGPSFEDLIV 255 (257)
T ss_dssp HHHHHTSCCCHHHHHHTT------TCCH----HHHHHHHHHHHTTGGGSS-CCCCCCCGGGEE
T ss_pred HHHHHhcCCCHHHHHHHh------CCCH----HHHHHHHHHHHHhHhhcc-CCCCCCCCCCCC
Confidence 987666667888877631 2554 668999999999999998 889998876543
No 22
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=99.83 E-value=8.5e-21 Score=188.95 Aligned_cols=96 Identities=28% Similarity=0.360 Sum_probs=83.6
Q ss_pred HHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhh
Q 009537 242 EEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESRE 321 (532)
Q Consensus 242 eeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e 321 (532)
.+++...+..||+||+++++.++++|+||||+||+++|+|+. ++ +++
T Consensus 9 ~~~~~~~l~~~l~~~v~~~~~~~vvv~lSGGiDSsv~a~l~~-------~~---------------~~~----------- 55 (249)
T 3fiu_A 9 PKEYSQKLVNWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAV-------KT---------------GLP----------- 55 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCSEEEEECCSSHHHHHHHHHHH-------HT---------------TSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHH-------Hh---------------CCC-----------
Confidence 467889999999999999999999999999999999999884 32 222
Q ss_pred ccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHHHHHHhhhh
Q 009537 322 FAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTL 375 (532)
Q Consensus 322 ~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~~~ 375 (532)
.+ +++|++..++..+.++|+++|+.+|+.|+.++|+++++++...+...
T Consensus 56 ----~~-av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~~~~~~~~~~~~~~~~ 104 (249)
T 3fiu_A 56 ----TT-ALILPSDNNQHQDMQDALELIEMLNIEHYTISIQPAYEAFLASTQSF 104 (249)
T ss_dssp ----EE-EEECCCTTSCHHHHHHHHHHHHHHTCEEEECCCHHHHHHHHHHTGGG
T ss_pred ----CE-EEEecCCCCCHHHHHHHHHHHHHhCCCEEEEEChHHHHHHHHHHHhh
Confidence 35 99999888899999999999999999999999999999887666443
No 23
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=99.82 E-value=1.1e-20 Score=191.44 Aligned_cols=107 Identities=21% Similarity=0.314 Sum_probs=80.5
Q ss_pred CcHHHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCch
Q 009537 240 SPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTES 319 (532)
Q Consensus 240 ~peeei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~ 319 (532)
.|+++| ...+.||+|||+++|.+|++|+||||+||+++|+|+. +++++ +|.+. .+
T Consensus 25 ~~~~~i-~~~v~~L~d~l~~~g~~~vvvglSGGiDSal~a~La~----~A~da--------------LG~~~---~~--- 79 (285)
T 3dpi_A 25 DARDEA-ERRIGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQ----LAVER--------------LRASG---YD--- 79 (285)
T ss_dssp CHHHHH-HHHHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHH----HHHHH--------------HHHTT---CC---
T ss_pred CHHHHH-HHHHHHHHHHHHHcCCCcEEEEccCChhHHHHHHHHH----HHHHH--------------hcccC---cc---
Confidence 455555 4557999999999999999999999999999988764 22444 44321 00
Q ss_pred hhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhC-CceEEEechHHHHHHHHHhhhhhCCC
Q 009537 320 REFAKRIFYTVFMGSENSSQETRMRAKKLADEIG-SWHLDVSIDTVVSAFLSLFQTLTGKR 379 (532)
Q Consensus 320 ~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG-~~h~~i~Id~~v~a~~~~f~~~~g~~ 379 (532)
..++++.||. +++.+.++|+++|+.+| +.|++|||+++++++.+.+.. .|.+
T Consensus 80 -----~~viav~~p~--~~~~~~~dA~~~a~~lg~i~~~~i~i~~~~~~~~~~l~~-~g~~ 132 (285)
T 3dpi_A 80 -----ARFVAMRLPY--GAQHDEADARRALAFVRADETLTVDVKPAADAMLAALAA-GGLA 132 (285)
T ss_dssp -----CEEEEEECCS--CC---CHHHHHHHHHHCCSEEEECCCHHHHHHHHHHHHH-TTCC
T ss_pred -----cEEEEEEcCC--CCHHHHHHHHHHHHHcCCCcEEEEEChHHHHHHHHHHHh-cCcc
Confidence 0378999984 56778899999999999 699999999999999877764 2444
No 24
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=98.90 E-value=3.4e-09 Score=111.27 Aligned_cols=111 Identities=23% Similarity=0.367 Sum_probs=82.1
Q ss_pred HHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCC
Q 009537 256 YLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSE 335 (532)
Q Consensus 256 ylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~ 335 (532)
+|+++...+++|++|||+||+++|.++. + .+. .|++++|...
T Consensus 3 ~~~~~~~~kVlVa~SGGvDSsv~a~lL~-------~---------------~G~----------------~V~~v~~~~~ 44 (376)
T 2hma_A 3 AMSDNSKTRVVVGMSGGVDSSVTALLLK-------E---------------QGY----------------DVIGIFMKNW 44 (376)
T ss_dssp --CCGGGSEEEEECCSSHHHHHHHHHHH-------H---------------TTC----------------EEEEEEEECC
T ss_pred hhhhCCCCeEEEEEeCHHHHHHHHHHHH-------H---------------cCC----------------cEEEEEEECC
Confidence 4555666799999999999999998874 2 332 3889999764
Q ss_pred C--------CCHHHHHHHHHHHHHhCCceEEEechHHHHH-HHHHhhh--hhCCCCCCc------------ch-hhhcCC
Q 009537 336 N--------SSQETRMRAKKLADEIGSWHLDVSIDTVVSA-FLSLFQT--LTGKRPRYK------------LD-EVDMGM 391 (532)
Q Consensus 336 n--------Ss~~t~~~A~~LA~~iG~~h~~i~Id~~v~a-~~~~f~~--~~g~~p~~~------------tD-E~dmGm 391 (532)
. ++.++.++|+.+|+.+|++|+.++++..+.. +.+.|.+ ..|++|++| .+ ..++|.
T Consensus 45 ~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~~~~~~~~v~~~~l~~y~~G~tpnpc~~C~r~ik~~~l~~~A~~~G~ 124 (376)
T 2hma_A 45 DDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAITLGA 124 (376)
T ss_dssp CCCC----CHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHHHHHHHHHTTCCCCHHHHHHHHTTTTHHHHHHHTTTC
T ss_pred CcccccccCCCHHHHHHHHHHHHHhCCcEEEEeChHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 2568899999999999999999999876533 2333322 348899876 11 225899
Q ss_pred CEeeeceeeEEEe
Q 009537 392 TYEELSVYGRLRK 404 (532)
Q Consensus 392 tY~~L~~~~rlr~ 404 (532)
+|..++|+.+-+.
T Consensus 125 d~IatGH~a~d~~ 137 (376)
T 2hma_A 125 DYVATGHYARVAR 137 (376)
T ss_dssp SEEECCCSEEEEE
T ss_pred CEEEECcchhhhh
Confidence 9999999988654
No 25
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=98.79 E-value=2.3e-08 Score=105.00 Aligned_cols=104 Identities=23% Similarity=0.316 Sum_probs=78.2
Q ss_pred CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCC-----
Q 009537 262 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSEN----- 336 (532)
Q Consensus 262 ~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~n----- 336 (532)
..+++|++|||+||+++|+|+. + .+. .|++++|....
T Consensus 17 ~~kVvVa~SGGvDSsv~a~lL~-------~---------------~G~----------------~V~~v~~~~~~~~~~~ 58 (380)
T 2der_A 17 AKKVIVGMSGGVDSSVSAWLLQ-------Q---------------QGY----------------QVEGLFMKNWEEDDGE 58 (380)
T ss_dssp CCEEEEECCSCSTTHHHHHHHH-------T---------------TCC----------------EEEEEEEECCCCCSHH
T ss_pred CCEEEEEEEChHHHHHHHHHHH-------H---------------cCC----------------eEEEEEEEcCcccccc
Confidence 4689999999999999998873 1 232 48999997543
Q ss_pred ---CCHHHHHHHHHHHHHhCCceEEEechHHHHH-HHHHhhh--hhCCCCCCc------------chh-hh-cCCCEeee
Q 009537 337 ---SSQETRMRAKKLADEIGSWHLDVSIDTVVSA-FLSLFQT--LTGKRPRYK------------LDE-VD-MGMTYEEL 396 (532)
Q Consensus 337 ---Ss~~t~~~A~~LA~~iG~~h~~i~Id~~v~a-~~~~f~~--~~g~~p~~~------------tDE-~d-mGmtY~~L 396 (532)
++.++.++|+.+|+.||++|+.+++++.+.. +.+.|.+ ..|++|++| .+. .+ +|.+|..+
T Consensus 59 ~~~~s~~d~~~a~~va~~LGIp~~vvd~~~~f~~~v~~~~~~ey~~G~tpnpc~~Cnr~ik~~~l~~~A~~~~Gad~Iat 138 (380)
T 2der_A 59 EYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 138 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHHHHHHHHHTTCCCCHHHHHHHHTTTTHHHHHHHHTTCCSEEEC
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEeCcHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 2567899999999999999999999876532 2333322 348899876 121 24 99999999
Q ss_pred ceeeEEE
Q 009537 397 SVYGRLR 403 (532)
Q Consensus 397 ~~~~rlr 403 (532)
+||.+.+
T Consensus 139 GH~a~d~ 145 (380)
T 2der_A 139 GHYVRRA 145 (380)
T ss_dssp CCSCEEE
T ss_pred ccccccc
Confidence 9998854
No 26
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=98.63 E-value=5.8e-08 Score=109.30 Aligned_cols=86 Identities=13% Similarity=0.127 Sum_probs=72.2
Q ss_pred HHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhc
Q 009537 243 EEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREF 322 (532)
Q Consensus 243 eei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~ 322 (532)
+++......+|++|+. .++++|+||||+||+++|+|+. ++ +|.+
T Consensus 224 ~~~~~~~i~~Ir~~v~---~~~vvv~lSGGvDSsVla~Ll~-------~a--------------lG~~------------ 267 (697)
T 2vxo_A 224 QNRELECIREIKERVG---TSKVLVLLSGGVDSTVCTALLN-------RA--------------LNQE------------ 267 (697)
T ss_dssp HHHHHHHHHHHHHHHT---TCEEEEECCSSHHHHHHHHHHH-------HH--------------SCGG------------
T ss_pred hHHHHHHHHHHHHHhc---ccceEEEccCchHHHHHHHHHH-------Hh--------------cCCc------------
Confidence 5677777888999883 4799999999999999999984 55 4433
Q ss_pred cCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHHHH
Q 009537 323 AKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSA 367 (532)
Q Consensus 323 ~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v~a 367 (532)
.|++++|+...+++.+.+.|+++|+.+|+.|..+++++.+.+
T Consensus 268 ---~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvdi~~~f~~ 309 (697)
T 2vxo_A 268 ---QVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYN 309 (697)
T ss_dssp ---GEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEECHHHHHT
T ss_pred ---eEEEEEeccccCCcchHHHHHHHHHHhCCcEEEecchHHHHh
Confidence 389999998877777889999999999999999999986654
No 27
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.42 E-value=4.4e-07 Score=99.07 Aligned_cols=83 Identities=20% Similarity=0.245 Sum_probs=66.5
Q ss_pred HHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhc
Q 009537 243 EEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREF 322 (532)
Q Consensus 243 eei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~ 322 (532)
+++......+|++++. .++++|+||||+||+++|+++. ++ ++ .
T Consensus 211 ~~~~~~~~~~ir~~v~---~~~vvvalSGGvDSsv~a~ll~-------~a--------------~G-~------------ 253 (525)
T 1gpm_A 211 AKIIDDAVARIREQVG---DDKVILGLSGGVDSSVTAMLLH-------RA--------------IG-K------------ 253 (525)
T ss_dssp HHHHHHHHHHHHHHHT---TCEEEEECCSSHHHHHHHHHHH-------HH--------------HG-G------------
T ss_pred HHHHHhhhhhhhhhhc---ccceEEEecCCCCHHHHHHHHH-------HH--------------hC-C------------
Confidence 5666677778888874 3799999999999999999884 44 44 2
Q ss_pred cCCeEEEEEeCCCCCCHHHHHHHHH-HHHHhCCceEEEechHHH
Q 009537 323 AKRIFYTVFMGSENSSQETRMRAKK-LADEIGSWHLDVSIDTVV 365 (532)
Q Consensus 323 ~~~~~~t~~m~t~nSs~~t~~~A~~-LA~~iG~~h~~i~Id~~v 365 (532)
.+++++|.+...+..+.+.|++ +|+.+|++|+.+++++.+
T Consensus 254 ---~v~av~v~~g~~~~~e~~~~~~~la~~lgi~~~~v~~~~~f 294 (525)
T 1gpm_A 254 ---NLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRF 294 (525)
T ss_dssp ---GEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECHHHH
T ss_pred ---CEEEEEEeCCCCCchHHHHHHHHHHHHhCCcEEEEeccHHH
Confidence 3889999987666667778865 899999999999998754
No 28
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=98.41 E-value=8.5e-07 Score=86.16 Aligned_cols=66 Identities=15% Similarity=0.183 Sum_probs=53.2
Q ss_pred CCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHH
Q 009537 261 GASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQE 340 (532)
Q Consensus 261 ~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~ 340 (532)
|+++++|++|||+||+++++++. ++ + . .++++++.....+..
T Consensus 1 ~~~kvvv~lSGG~DS~~~l~ll~-------~~---------------~-~---------------~v~av~~~~g~~~~~ 42 (232)
T 2pg3_A 1 GMKRAVVVFSGGQDSTTCLIQAL-------QD---------------Y-D---------------DVHCITFDYGQRHRA 42 (232)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHH-------HH---------------C-S---------------EEEEEEEESSSSCHH
T ss_pred CCCCEEEEecCcHHHHHHHHHHH-------Hc---------------C-C---------------CEEEEEEECCCCCHH
Confidence 45789999999999999988873 22 2 2 378888876655667
Q ss_pred HHHHHHHHHHHhCCc-eEEEechHH
Q 009537 341 TRMRAKKLADEIGSW-HLDVSIDTV 364 (532)
Q Consensus 341 t~~~A~~LA~~iG~~-h~~i~Id~~ 364 (532)
+.+.|+++|+.+|+. |+.++++.+
T Consensus 43 e~~~a~~~a~~lgi~~~~vi~~~~l 67 (232)
T 2pg3_A 43 EIEVAQELSQKLGAAAHKVLDVGLL 67 (232)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTHH
T ss_pred HHHHHHHHHHHhCCCceEEEeChhH
Confidence 889999999999999 999999843
No 29
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=98.41 E-value=7.4e-07 Score=90.93 Aligned_cols=82 Identities=23% Similarity=0.195 Sum_probs=63.8
Q ss_pred HHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhc
Q 009537 243 EEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREF 322 (532)
Q Consensus 243 eei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~ 322 (532)
+.+......+|++++. .++++|+||||+||+++|+++. ++ ++ .
T Consensus 4 ~~~~~~~~~~ir~~v~---~~kvlvalSGGvDSsvla~ll~-------~~--------------~g-~------------ 46 (308)
T 2dpl_A 4 GRFVEEKVREIRETVG---DSKAIIALSGGVDSSTAAVLAH-------KA--------------IG-D------------ 46 (308)
T ss_dssp HHHHHHHHHHHHHHHT---TSCEEEECCSSHHHHHHHHHHH-------HH--------------HG-G------------
T ss_pred HHHHHHHHHHHHHHhC---CCCEEEEEeChHHHHHHHHHHH-------Hh--------------hC-C------------
Confidence 4566677788999885 4789999999999999999884 33 34 2
Q ss_pred cCCeEEEEEeCCCCCCHHHHHHHHH-HHHHhCCceEEEechHH
Q 009537 323 AKRIFYTVFMGSENSSQETRMRAKK-LADEIGSWHLDVSIDTV 364 (532)
Q Consensus 323 ~~~~~~t~~m~t~nSs~~t~~~A~~-LA~~iG~~h~~i~Id~~ 364 (532)
.++++++.+......+.+.+++ +|+.+|++|+.++++..
T Consensus 47 ---~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~ 86 (308)
T 2dpl_A 47 ---RLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQDR 86 (308)
T ss_dssp ---GEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEECHHH
T ss_pred ---CEEEEEEcCCCCChHHHHHHHHHHHHHcCCcEEEEECCHH
Confidence 2788999876555556667777 66799999999999864
No 30
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=98.26 E-value=2.8e-06 Score=92.18 Aligned_cols=82 Identities=22% Similarity=0.186 Sum_probs=66.8
Q ss_pred HHHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhc
Q 009537 243 EEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREF 322 (532)
Q Consensus 243 eei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~ 322 (532)
+.+......+|++++. .++++|+||||+||+++|+|+. ++ + .
T Consensus 193 ~~~~~~~i~~ir~~~~---~~kvvvalSGGvDSsvla~ll~-------~~---------------g-~------------ 234 (503)
T 2ywb_A 193 EHVLEELLREVRERAG---KDRVLLAVSGGVDSSTLALLLA-------KA---------------G-V------------ 234 (503)
T ss_dssp HHHHHHHHHHHHHHHT---TSEEEEEECSSHHHHHHHHHHH-------HH---------------T-C------------
T ss_pred hhhhHHHHHhhhhhcc---CccEEEEecCCcchHHHHHHHH-------Hc---------------C-C------------
Confidence 4556666778888873 4789999999999999998874 22 2 2
Q ss_pred cCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechHHH
Q 009537 323 AKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVV 365 (532)
Q Consensus 323 ~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~~v 365 (532)
.++++++.+...++++.+.++++|+++|++|+.++++..+
T Consensus 235 ---~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~~~~f 274 (503)
T 2ywb_A 235 ---DHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKERF 274 (503)
T ss_dssp ---EEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEECHHHH
T ss_pred ---eEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEECcHHH
Confidence 4889999987666788999999999999999999998754
No 31
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.25 E-value=2.3e-06 Score=93.99 Aligned_cols=74 Identities=15% Similarity=0.164 Sum_probs=58.2
Q ss_pred HHHHHhC-CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeC
Q 009537 255 DYLRRSG-ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMG 333 (532)
Q Consensus 255 dylrrs~-~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~ 333 (532)
+++|+.| .++++++||||+||+++|+|+. ++ ++ + .+++++|.
T Consensus 247 ~~ir~~g~~~~vvvalSGGvDSsv~a~ll~-------~~--------------~G-~---------------~v~~v~vd 289 (556)
T 3uow_A 247 KNIEKYKHDHYVIAAMSGGIDSTVAAAYTH-------KI--------------FK-E---------------RFFGIFID 289 (556)
T ss_dssp HHHGGGTTTCEEEEECCSSHHHHHHHHHHH-------HH--------------HG-G---------------GEEEEEEE
T ss_pred eeeeecCCCceEEEEcccCCCHHHHHHHHH-------HH--------------hC-C---------------eEEEEEEe
Confidence 4444446 6789999999999999999984 55 45 3 38999999
Q ss_pred CCCCCHHHHHHH-HHHHHHh-CCceEEEechHHH
Q 009537 334 SENSSQETRMRA-KKLADEI-GSWHLDVSIDTVV 365 (532)
Q Consensus 334 t~nSs~~t~~~A-~~LA~~i-G~~h~~i~Id~~v 365 (532)
+......+.+.| +.+|+.+ |++|+.+|+++.+
T Consensus 290 ~g~~~~~e~~~~~~~~~~~l~gi~~~~vd~~~~f 323 (556)
T 3uow_A 290 NGLLRKNEAENVYTFLKSTFPDMNITKIDASENF 323 (556)
T ss_dssp CSCSCTTHHHHHHHHHHHHCTTSEEEEEECHHHH
T ss_pred cCCCChHHHHHHHHHHHHhcCCCCeEEeccHHHH
Confidence 776555555566 6799999 9999999998765
No 32
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=98.23 E-value=1.8e-06 Score=82.42 Aligned_cols=64 Identities=19% Similarity=0.134 Sum_probs=52.2
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
+.++|+||||+||+++++++. + .+ . .++++++.....+.++.
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~-------~---------------~~-~---------------~v~~~~~~~~~~~~~e~ 45 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWAL-------K---------------EF-E---------------EVETVTFHYNQRHSQEV 45 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHH-------H---------------HC-S---------------EEEEEEEESSCTTCHHH
T ss_pred CCEEEEccCcHHHHHHHHHHH-------H---------------cC-C---------------ceEEEEEeCCCCCHHHH
Confidence 579999999999999988873 2 22 2 37788887665555778
Q ss_pred HHHHHHHHHhCCceEEEechHH
Q 009537 343 MRAKKLADEIGSWHLDVSIDTV 364 (532)
Q Consensus 343 ~~A~~LA~~iG~~h~~i~Id~~ 364 (532)
+.|+++|+.+|++|+.++++.+
T Consensus 46 ~~a~~~a~~lgi~~~~~~~~~~ 67 (219)
T 3bl5_A 46 EVAKSIAEKLGVKNHLLDMSLL 67 (219)
T ss_dssp HHHHHHHHTTCCCEEEEECGGG
T ss_pred HHHHHHHHHhCCCeEEEeChHH
Confidence 9999999999999999999863
No 33
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=98.06 E-value=6.7e-06 Score=89.80 Aligned_cols=82 Identities=20% Similarity=0.207 Sum_probs=60.6
Q ss_pred HHHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhcc
Q 009537 244 EIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFA 323 (532)
Q Consensus 244 ei~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~ 323 (532)
++.......|++++ +.++++|+||||+||+++|+|+. ++ ++.
T Consensus 215 ~~~~~~i~~i~~~v---~~~kvlvalSGGvDSsvla~ll~-------~~--------------~G~-------------- 256 (527)
T 3tqi_A 215 HIIEDSIRDIQEKV---GKEQVIVGLSGGVDSAVTATLVH-------KA--------------IGD-------------- 256 (527)
T ss_dssp HHHHHHHHHHHHHH---TTSCEEEECTTTHHHHHHHHHHH-------HH--------------HGG--------------
T ss_pred HHHHHHHHHHHHhc---CCCeEEEEEecCcCHHHHHHHHH-------HH--------------hCC--------------
Confidence 44444444566655 34889999999999999999884 44 442
Q ss_pred CCeEEEEEeCCCCCCHHHHHHHHH-HHHHhCCceEEEechHHH
Q 009537 324 KRIFYTVFMGSENSSQETRMRAKK-LADEIGSWHLDVSIDTVV 365 (532)
Q Consensus 324 ~~~~~t~~m~t~nSs~~t~~~A~~-LA~~iG~~h~~i~Id~~v 365 (532)
.++++++.+...+..+.+.+.+ +|+.+|++|+.++++..+
T Consensus 257 --~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~~ 297 (527)
T 3tqi_A 257 --QLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVDAKDRF 297 (527)
T ss_dssp --GEEEEEECCSCSCTTHHHHHHHHHTTSSCCEEEEECCHHHH
T ss_pred --eEEEEEeccCCCChhHHHHHHHHHHHHcCCcEEEEeChHHH
Confidence 3889999876555555566655 999999999999998764
No 34
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=98.05 E-value=5.5e-06 Score=87.85 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=69.6
Q ss_pred CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHH
Q 009537 262 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQET 341 (532)
Q Consensus 262 ~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t 341 (532)
..+++|++|||+|||++|+++. + .|. .|++++|-.... ++
T Consensus 14 ~~KVVVA~SGGlDSSv~a~~Lk-------e---------------~G~----------------eViavt~d~Gq~--~E 53 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLC-------E---------------KGF----------------DVIAYVANVGQK--DD 53 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHH-------H---------------TTC----------------EEEEEEEESSCC--CC
T ss_pred cCCEEEEeCCcHHHHHHHHHHH-------H---------------CCC----------------eEEEEEEEcCCH--HH
Confidence 3579999999999999988873 2 343 489999986542 67
Q ss_pred HHHHHHHHHHhCC-ceEEEechHHHH-HHHHHhhhh----hCCCC------CCc-----c-hhhhcCCCEeeeceeeE
Q 009537 342 RMRAKKLADEIGS-WHLDVSIDTVVS-AFLSLFQTL----TGKRP------RYK-----L-DEVDMGMTYEELSVYGR 401 (532)
Q Consensus 342 ~~~A~~LA~~iG~-~h~~i~Id~~v~-a~~~~f~~~----~g~~p------~~~-----t-DE~dmGmtY~~L~~~~r 401 (532)
.++|+++|+.+|+ .|+++|+.+.+. .+...+-.. .|..| +++ . -..++|++|...+++++
T Consensus 54 le~A~~vA~~lGi~~~~VvDl~eef~~~v~~p~i~~na~yeg~Y~~g~~l~Rp~i~~~l~~~A~~~Gad~IA~G~~~k 131 (421)
T 1vl2_A 54 FVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAMYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGK 131 (421)
T ss_dssp HHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTTCCBTTTBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTT
T ss_pred HHHHHHHHHHcCCceEEEEecHHHHHHhhhhHHHhcCCcccCceeCCCcccHHHHHHHHHHHHHHcCCCEEEECCeeC
Confidence 8999999999999 999999976443 322222111 12222 222 1 12358999999999873
No 35
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=97.99 E-value=1.1e-05 Score=77.07 Aligned_cols=63 Identities=22% Similarity=0.186 Sum_probs=49.9
Q ss_pred CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHH
Q 009537 262 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQET 341 (532)
Q Consensus 262 ~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t 341 (532)
.++++|++|||+||++++.++. . .+. .++++++...... +
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~--------~--------------~g~----------------~v~~~~v~~~~~~--~ 45 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILK--------K--------------LGY----------------NPHLITINFGVIP--S 45 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHH--------H--------------TTE----------------EEEEEEEECSSSC--T
T ss_pred CCeEEEEEECcHHHHHHHHHHH--------H--------------cCC----------------CeEEEEEeCCCch--H
Confidence 4689999999999999887763 1 332 3677777655444 6
Q ss_pred HHHHHHHHHHhCCceEEEechHH
Q 009537 342 RMRAKKLADEIGSWHLDVSIDTV 364 (532)
Q Consensus 342 ~~~A~~LA~~iG~~h~~i~Id~~ 364 (532)
.+.|+++|+.+|++|+.++++..
T Consensus 46 ~~~~~~~a~~lgi~~~~~~~~~~ 68 (203)
T 3k32_A 46 YKLAEETAKILGFKHKVITLDRK 68 (203)
T ss_dssp THHHHHHHHHHTCEEEEEECCTH
T ss_pred HHHHHHHHHHhCCCEEEEECCHH
Confidence 78999999999999999999865
No 36
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=97.95 E-value=1.6e-05 Score=86.57 Aligned_cols=84 Identities=29% Similarity=0.303 Sum_probs=64.0
Q ss_pred CcHHHHHhhHHHHHHHHHHHhC--CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCC
Q 009537 240 SPEEEIAFGPGCWLWDYLRRSG--ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPT 317 (532)
Q Consensus 240 ~peeei~~~~a~~L~dylrrs~--~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~ 317 (532)
..+++....+...|.+-+++.- -..+.+.||||+|||++|+++. +. . .
T Consensus 217 ~~~~~~~~~l~~~L~~aV~~rl~sd~~vgv~LSGGlDSS~vaala~-------~~---------------~-~------- 266 (513)
T 1jgt_A 217 LPEGEAVAAVRAALEKAVAQRVTPGDTPLVVLSGGIDSSGVAACAH-------RA---------------A-G------- 266 (513)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCTTCCCEEECCSSHHHHHHHHHHH-------HH---------------H-S-------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCCcHHHHHHHHHHH-------Hh---------------C-C-------
Confidence 3467888888888999888742 3579999999999999999884 22 1 1
Q ss_pred chhhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechH
Q 009537 318 ESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 318 ~~~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~ 363 (532)
.++|+.++..+ ..+...|+++|+.+|+.|+.+++++
T Consensus 267 --------~v~tfti~~~~--~~E~~~A~~vA~~lg~~h~~i~i~~ 302 (513)
T 1jgt_A 267 --------ELDTVSMGTDT--SNEFREARAVVDHLRTRHREITIPT 302 (513)
T ss_dssp --------SCEEEEEECSS--CCCHHHHHHHHHHHTCEEEEEECCH
T ss_pred --------CceEEEcCCCC--CCHHHHHHHHHHHhCCCcEEEECCH
Confidence 14455555443 3567899999999999999999986
No 37
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=97.85 E-value=3.3e-05 Score=81.84 Aligned_cols=94 Identities=18% Similarity=0.079 Sum_probs=67.6
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCC-CCCHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSE-NSSQET 341 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~-nSs~~t 341 (532)
++++|++|||+||+++|.++. + .|. .++++++.+. ..++.+
T Consensus 188 ~kvlvalSGGvDS~vll~ll~-------~---------------~G~----------------~v~av~v~~~~~~~~~~ 229 (413)
T 2c5s_A 188 GKVMVLLSGGIDSPVAAYLTM-------K---------------RGV----------------SVEAVHFHSPPFTSERA 229 (413)
T ss_dssp EEEEEECCSSSHHHHHHHHHH-------H---------------BTE----------------EEEEEEEECTTTSCHHH
T ss_pred CeEEEEeCCCChHHHHHHHHH-------H---------------cCC----------------cEEEEEEeCCCCCCHHH
Confidence 579999999999999888873 1 232 3788888764 456788
Q ss_pred HHHHHHHHHHh-----CCceEEEechHHHHHHHHHhhhhhCCCCCCc------------chhhhcCCCEeeecee
Q 009537 342 RMRAKKLADEI-----GSWHLDVSIDTVVSAFLSLFQTLTGKRPRYK------------LDEVDMGMTYEELSVY 399 (532)
Q Consensus 342 ~~~A~~LA~~i-----G~~h~~i~Id~~v~a~~~~f~~~~g~~p~~~------------tDE~dmGmtY~~L~~~ 399 (532)
.+.++++|+.+ |++|+.++++....++...... ...| .-..+.|.++..+++.
T Consensus 230 ~~~v~~~a~~l~~~~ggi~~~vv~~~~~~~~i~~~~~~-----~~~c~~~Rr~~~~~~~~~A~~~g~~~I~tG~~ 299 (413)
T 2c5s_A 230 KQKVIDLAQELTKYCKRVTLHLVPFTEVQKTINKEIPS-----SYSMTVMRRMMMRITERIAEERNALAITTGES 299 (413)
T ss_dssp HHHHHHHHHHHGGGSSCEEEEEEECHHHHHHHHHHSCG-----GGHHHHHHHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEECcHHHHHHHhcCCc-----ccHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 89999999999 9999999999877654322110 0011 1122578888888875
No 38
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=97.85 E-value=3.7e-05 Score=83.46 Aligned_cols=89 Identities=26% Similarity=0.277 Sum_probs=64.6
Q ss_pred cHHHHHhhHHHHHHHHHHHh--CCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCc
Q 009537 241 PEEEIAFGPGCWLWDYLRRS--GASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTE 318 (532)
Q Consensus 241 peeei~~~~a~~L~dylrrs--~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~ 318 (532)
+++|....+...|.+-+++. .-..+.+.||||+||+++|+++. + .+ .
T Consensus 215 ~~~~~~~~l~~~L~~aV~~rl~sd~~v~v~LSGGlDSs~vaala~-------~---------------~~-~-------- 263 (503)
T 1q15_A 215 PREPLLALIDRYLNAPLEDLAPRFDTVGIPLSGGLDSSLVTALAS-------R---------------HF-K-------- 263 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHGGGCSEEEEECCSSHHHHHHHHHHT-------T---------------TC-S--------
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCCCHHHHHHHHHHH-------H---------------hC-C--------
Confidence 45777777777888877763 23578999999999999998873 1 11 1
Q ss_pred hhhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechH--HHHHHH
Q 009537 319 SREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDT--VVSAFL 369 (532)
Q Consensus 319 ~~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~--~v~a~~ 369 (532)
.++|+.++..++ .+...|+++|+.+|+.|+.+++++ +++.+.
T Consensus 264 -------~~~~~t~~~~~~--~E~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~ 307 (503)
T 1q15_A 264 -------KLNTYSIGTELS--NEFEFSQQVADALGTHHQMKILSETEVINGII 307 (503)
T ss_dssp -------EEEEEEEEETTB--CCHHHHHHHHHHHTCEEEEEEECHHHHHHHHH
T ss_pred -------CcEEEEEeCCCc--cHHHHHHHHHHHhCCceEEEECCHHHHHHHHH
Confidence 255555554432 467899999999999999999986 444443
No 39
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=97.80 E-value=8.6e-05 Score=71.12 Aligned_cols=63 Identities=14% Similarity=0.063 Sum_probs=51.3
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
..++|++|||.||++++.|+. + +.. .+..+++-+....++|.
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~-------~---------------~~~----------------~v~~v~vd~g~~~~e~~ 86 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVN-------Q---------------IRP----------------DIPVILTDTGYLFPETY 86 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHH-------H---------------HST----------------TCEEEEEECSCBCHHHH
T ss_pred CCEEEEecCCHHHHHHHHHHH-------H---------------hCC----------------CCeEEEeeCCCCCHHHH
Confidence 589999999999999888874 2 221 15677777766678999
Q ss_pred HHHHHHHHHhCCceEEEechH
Q 009537 343 MRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 343 ~~A~~LA~~iG~~h~~i~Id~ 363 (532)
+.++++|+.+|+.++.+..+.
T Consensus 87 ~~v~~~~~~~gi~~~v~~~~~ 107 (215)
T 1sur_A 87 RFIDELTDKLKLNLKVYRATE 107 (215)
T ss_dssp HHHHHHHHHTTCEEEEEECSS
T ss_pred HHHHHHHHHhCCcEEEEeCCC
Confidence 999999999999999998764
No 40
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=97.70 E-value=4.8e-05 Score=80.33 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=51.4
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
++++|++|||+||++++.++. ++ .+. .++++++.+.. .++.
T Consensus 1 ~kVvva~SGG~DSsvll~ll~-------~~--------------~g~----------------~V~av~vd~g~--~~e~ 41 (400)
T 1kor_A 1 MKIVLAYSGGLDTSIILKWLK-------ET--------------YRA----------------EVIAFTADIGQ--GEEV 41 (400)
T ss_dssp CEEEEECCSSHHHHHHHHHHH-------HH--------------HTC----------------EEEEEEEESSC--SSCH
T ss_pred CcEEEEEeChHHHHHHHHHHH-------Hh--------------hCC----------------cEEEEEEeCCC--HHHH
Confidence 368999999999999888773 32 232 37888888765 5678
Q ss_pred HHHHHHHHHhCC-ceEEEechHHH
Q 009537 343 MRAKKLADEIGS-WHLDVSIDTVV 365 (532)
Q Consensus 343 ~~A~~LA~~iG~-~h~~i~Id~~v 365 (532)
+.|+++|+++|+ .|+.+++++.+
T Consensus 42 e~a~~~A~~lGi~~~~vvd~~~ef 65 (400)
T 1kor_A 42 EEAREKALRTGASKAIALDLKEEF 65 (400)
T ss_dssp HHHHHHHHHHTCSEEEEEECHHHH
T ss_pred HHHHHHHHHhCCCeEEEEeCcHHH
Confidence 999999999999 79999998654
No 41
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=97.70 E-value=3.7e-05 Score=82.28 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=52.4
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
++++|++|||+||++++.++. + .+. .|+++++-....+.++.
T Consensus 11 ~KVvVA~SGGlDSSvll~~L~-------e---------------~G~----------------eViavtvd~Gq~~~~el 52 (455)
T 1k92_A 11 QRIGIAFSGGLDTSAALLWMR-------Q---------------KGA----------------VPYAYTANLGQPDEEDY 52 (455)
T ss_dssp SEEEEECCSSHHHHHHHHHHH-------H---------------TTC----------------EEEEEEEECCCTTCSCT
T ss_pred CeEEEEEcChHHHHHHHHHHH-------H---------------cCC----------------EEEEEEEEcCCCCHHHH
Confidence 689999999999999888773 1 232 37888887654444678
Q ss_pred HHHHHHHHHhCC-ceEEEechHHHH
Q 009537 343 MRAKKLADEIGS-WHLDVSIDTVVS 366 (532)
Q Consensus 343 ~~A~~LA~~iG~-~h~~i~Id~~v~ 366 (532)
+.|+++|+++|+ .|+.+|+++.+.
T Consensus 53 e~a~~~A~~lGi~~~~vvD~~eef~ 77 (455)
T 1k92_A 53 DAIPRRAMEYGAENARLIDCRKQLV 77 (455)
T ss_dssp THHHHHHHHHTCSEEEEEECHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEeChHHHH
Confidence 999999999999 899999976543
No 42
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=97.65 E-value=0.00013 Score=79.94 Aligned_cols=87 Identities=24% Similarity=0.293 Sum_probs=52.3
Q ss_pred HHHHHHHHHh--CCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEE
Q 009537 251 CWLWDYLRRS--GASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFY 328 (532)
Q Consensus 251 ~~L~dylrrs--~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~ 328 (532)
.-|.+-+++. .-..+.+.||||+|||++|+|+. +.... ....+.... .+-| .++
T Consensus 213 ~~L~~aV~~rl~sdvpvgv~LSGGlDSS~iaala~-------~~~~~---~~~~~~~~~-----a~~~---------~l~ 268 (553)
T 1ct9_A 213 QALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITK-------KYAAR---RVEDQERSE-----AWWP---------QLH 268 (553)
T ss_dssp HHHHHHHHHHTCCSSCEEEECCSSHHHHHHHHHHH-------HHC---------------------------------CE
T ss_pred HHHHHHHHHHhcCCCceEEeCCCCccHHHHHHHHH-------Hhhcc---ccccccccc-----cccC---------cee
Confidence 3344444442 22478999999999999999885 22100 000000000 0001 156
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHhCCceEEEechH
Q 009537 329 TVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 329 t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id~ 363 (532)
|+..+...+ .++..|+++|+.+|+.|++++++.
T Consensus 269 tfsig~~~~--~E~~~A~~vA~~lg~~h~~i~~~~ 301 (553)
T 1ct9_A 269 SFAVGLPGS--PDLKAAQEVANHLGTVHHEIHFTV 301 (553)
T ss_dssp EEEEESTTC--HHHHHHHHHHHHHTCEEEEEECCH
T ss_pred EEEecCCCC--cHHHHHHHHHHHhCCCCEEEECCH
Confidence 666665543 578899999999999999999864
No 43
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=97.59 E-value=8.4e-05 Score=78.80 Aligned_cols=99 Identities=19% Similarity=0.221 Sum_probs=65.8
Q ss_pred CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHH
Q 009537 262 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQET 341 (532)
Q Consensus 262 ~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t 341 (532)
.++++|++|||+||++++.++. + .+. .|+++++..... ++
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~-------e---------------~G~----------------eV~av~vd~g~~--~e 44 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLK-------E---------------QGY----------------DVIAYLANIGQK--ED 44 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHH-------H---------------TTE----------------EEEEEEEESSCC--CC
T ss_pred CCeEEEEEcChHHHHHHHHHHH-------H---------------cCC----------------EEEEEEEECCcH--HH
Confidence 3679999999999999888773 1 222 378888876543 56
Q ss_pred HHHHHHHHHHhCCc-eEEEechHHHH-HHHH-Hhhhh--------hCCC-CCCc-----ch-hhhcCCCEeeeceee
Q 009537 342 RMRAKKLADEIGSW-HLDVSIDTVVS-AFLS-LFQTL--------TGKR-PRYK-----LD-EVDMGMTYEELSVYG 400 (532)
Q Consensus 342 ~~~A~~LA~~iG~~-h~~i~Id~~v~-a~~~-~f~~~--------~g~~-p~~~-----tD-E~dmGmtY~~L~~~~ 400 (532)
.+.|+++|+++|+. |+.+++++.+. .+.. .+..- .|.. ++++ .. ..+.|.++..+++.+
T Consensus 45 ~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~a~~e~~y~~g~~~aRp~i~~~l~~~A~~~Ga~~IatGh~~ 121 (413)
T 2nz2_A 45 FEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQSSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATG 121 (413)
T ss_dssp HHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCCBTTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCT
T ss_pred HHHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHHhCcccccccccccccchHHHHHHHHHHHHHcCCCEEEECCcC
Confidence 89999999999998 88999975443 2221 22110 1111 2211 11 124799999999986
No 44
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=97.57 E-value=0.00013 Score=74.21 Aligned_cols=68 Identities=16% Similarity=0.073 Sum_probs=50.7
Q ss_pred CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCe-EEEEEeCCCC--CC
Q 009537 262 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRI-FYTVFMGSEN--SS 338 (532)
Q Consensus 262 ~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~-~~t~~m~t~n--Ss 338 (532)
.+.++|++|||+||++++.++.. ... +.+. . ++++++.... .+
T Consensus 24 ~~~vlva~SGG~DS~~Ll~ll~~-------~~~-----------~~g~----------------~~v~av~vd~g~r~~s 69 (317)
T 1wy5_A 24 ERRVLIAFSGGVDSVVLTDVLLK-------LKN-----------YFSL----------------KEVALAHFNHMLRESA 69 (317)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH-------STT-----------TTTC----------------SEEEEEEEECCSSTHH
T ss_pred CCEEEEEecchHHHHHHHHHHHH-------HHH-----------HcCC----------------CEEEEEEEECCCCccc
Confidence 46899999999999998888742 100 0111 3 6777776443 35
Q ss_pred HHHHHHHHHHHHHhCCceEEEechH
Q 009537 339 QETRMRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 339 ~~t~~~A~~LA~~iG~~h~~i~Id~ 363 (532)
.++.+.++++|+.+|++|+.++++.
T Consensus 70 ~~~~~~v~~~a~~lgi~~~v~~~~~ 94 (317)
T 1wy5_A 70 ERDEEFCKEFAKERNMKIFVGKEDV 94 (317)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCH
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEec
Confidence 7889999999999999999999874
No 45
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.44 E-value=0.00036 Score=68.79 Aligned_cols=63 Identities=14% Similarity=0.063 Sum_probs=51.7
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
..++|++|||+||++++.|+. + +.. .+..+++-+....++|.
T Consensus 46 ~~v~va~SGG~DS~vLL~ll~-------~---------------~~~----------------~v~vv~idtg~~~~et~ 87 (252)
T 2o8v_A 46 GEYVLSSSFGIQAAVSLHLVN-------Q---------------IRP----------------DIPVILTDTGYLFPETY 87 (252)
T ss_dssp SCEEEECCCSTTHHHHHHHHH-------H---------------HST----------------TCEEEECCCSCBCHHHH
T ss_pred CCEEEEeCCCHHHHHHHHHHH-------H---------------hCC----------------CCeEEEecCCCCCHHHH
Confidence 579999999999999888774 2 221 15678888877788999
Q ss_pred HHHHHHHHHhCCceEEEechH
Q 009537 343 MRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 343 ~~A~~LA~~iG~~h~~i~Id~ 363 (532)
+.++++|+.+|+++..+..+.
T Consensus 88 ~~~~~~~~~~gi~~~v~~~~~ 108 (252)
T 2o8v_A 88 RFIDELTDKLKLNLKVYRATE 108 (252)
T ss_dssp HHHHHHHHHTTCEEEECCCSS
T ss_pred HHHHHHHHHhCCceEEEcCCC
Confidence 999999999999999887764
No 46
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=97.42 E-value=0.00016 Score=71.21 Aligned_cols=66 Identities=15% Similarity=-0.033 Sum_probs=43.2
Q ss_pred CCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCC---CC
Q 009537 261 GASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSE---NS 337 (532)
Q Consensus 261 ~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~---nS 337 (532)
+.-++++.+|||.||+++|+++. + .|. .+.++++-.. .+
T Consensus 3 ~~MKvvvl~SGGkDSs~al~~l~-------~---------------~G~----------------eV~~L~~~~~~~~~s 44 (237)
T 3rjz_A 3 GLADVAVLYSGGKDSNYALYWAI-------K---------------NRF----------------SVKFLVTMVSENEES 44 (237)
T ss_dssp CCSEEEEECCSSHHHHHHHHHHH-------H---------------TTC----------------EEEEEEEEECC----
T ss_pred CCCEEEEEecCcHHHHHHHHHHH-------H---------------cCC----------------eEEEEEEEcCCCCCc
Confidence 33579999999999999888763 2 232 2455533211 11
Q ss_pred ---CHHHHHHHHHHHHHhCCceEEEechHH
Q 009537 338 ---SQETRMRAKKLADEIGSWHLDVSIDTV 364 (532)
Q Consensus 338 ---s~~t~~~A~~LA~~iG~~h~~i~Id~~ 364 (532)
.....+.|+..|+.+|++|+.+++...
T Consensus 45 ~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~ 74 (237)
T 3rjz_A 45 YMYHTINANLTDLQARALGIPLVKGFTQGE 74 (237)
T ss_dssp ----CCSSSHHHHHHHHHTCCEEEEEC---
T ss_pred cccCCccHHHHHHHHHHcCCCEEEEECCCC
Confidence 123356899999999999999999753
No 47
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=97.35 E-value=0.0004 Score=70.71 Aligned_cols=79 Identities=15% Similarity=0.150 Sum_probs=62.1
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
+.++++||| +||+++|+++. + .|. .+++++|. .++...
T Consensus 180 ~kvlvllSG-vDS~vaa~ll~-------~---------------~G~----------------~v~~v~~~---~~~~~~ 217 (307)
T 1vbk_A 180 GRMIGILHD-ELSALAIFLMM-------K---------------RGV----------------EVIPVYIG---KDDKNL 217 (307)
T ss_dssp CEEEEECSS-HHHHHHHHHHH-------H---------------BTC----------------EEEEEEES---CSSHHH
T ss_pred CcEEEEEeC-CcHHHHHHHHH-------h---------------CCC----------------eEEEEEEE---ECHHHH
Confidence 478999999 99999988873 2 343 48999998 456778
Q ss_pred HHHHHHHHHh-------CCceEEEe-chHHHHHHHHHhhhhhCCCCCCcchhhhcCCCEeeeceeeE
Q 009537 343 MRAKKLADEI-------GSWHLDVS-IDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGR 401 (532)
Q Consensus 343 ~~A~~LA~~i-------G~~h~~i~-Id~~v~a~~~~f~~~~g~~p~~~tDE~dmGmtY~~L~~~~r 401 (532)
+.|+++|+.| |++++.+| ..+++ . .- .++|.++..++|+..
T Consensus 218 ~~a~~~a~~l~~~~~~~~i~~~vv~~~~~~~--------~---------~A-~~~ga~~I~tG~~~~ 266 (307)
T 1vbk_A 218 EKVRSLWNLLKRYSYGSKGFLVVAESFDRVL--------K---------LI-RDFGVKGVIKGLRPN 266 (307)
T ss_dssp HHHHHHHHHHHTTCTTSCCCCEEESSHHHHH--------H---------HH-HHHTCCEEECCCCGG
T ss_pred HHHHHHHHHHhhhccCCCCcEEEeCCCHHHH--------H---------HH-HHcCCCEEEECcccc
Confidence 9999999999 89999999 87665 1 11 247999999999853
No 48
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=97.29 E-value=0.00058 Score=73.25 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=52.9
Q ss_pred HHHHHhC----CCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEE
Q 009537 255 DYLRRSG----ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTV 330 (532)
Q Consensus 255 dylrrs~----~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~ 330 (532)
.++++.+ ...++|++|||+||++++.++..+. + +.+. .++++
T Consensus 7 ~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~----~--------------~~~~----------------~v~av 52 (464)
T 3a2k_A 7 AFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLR----D--------------EWKL----------------QVIAA 52 (464)
T ss_dssp HHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHH----H--------------TTTC----------------BCEEE
T ss_pred HHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHH----H--------------HcCC----------------eEEEE
Confidence 4455533 3679999999999999888874210 0 0221 26677
Q ss_pred EeCCCCC---CHHHHHHHHHHHHHhCCceEEEech
Q 009537 331 FMGSENS---SQETRMRAKKLADEIGSWHLDVSID 362 (532)
Q Consensus 331 ~m~t~nS---s~~t~~~A~~LA~~iG~~h~~i~Id 362 (532)
++..... |.++.+.++++|+.+|++|+.++++
T Consensus 53 hvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~~~ 87 (464)
T 3a2k_A 53 HVDHMFRGRESEEEMEFVKRFCVERRILCETAQID 87 (464)
T ss_dssp EEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEECCCCccccHHHHHHHHHHHHHcCCcEEEEEec
Confidence 7765443 4678889999999999999999886
No 49
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=97.13 E-value=0.00069 Score=72.04 Aligned_cols=76 Identities=12% Similarity=0.070 Sum_probs=54.0
Q ss_pred HHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEe
Q 009537 253 LWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFM 332 (532)
Q Consensus 253 L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m 332 (532)
|.+++.. .+.++|++|||+||++++.++.. .... ..+ . .++++++
T Consensus 6 l~~~l~~--~~~vlVa~SGG~DS~~Ll~ll~~-------~~~~----------~~g-~---------------~v~avhv 50 (433)
T 1ni5_A 6 LNRQLLT--SRQILVAFSGGLDSTVLLHQLVQ-------WRTE----------NPG-V---------------ALRAIHV 50 (433)
T ss_dssp HHHHHTT--CSEEEEECCSBHHHHHHHHHHHH-------HHTT----------STT-C---------------EEEEEEE
T ss_pred HHHhcCC--CCEEEEEEcchHHHHHHHHHHHH-------HHHh----------cCC-C---------------eEEEEEE
Confidence 5566544 36899999999999998887742 1000 011 1 3778888
Q ss_pred CCCC--CCHHHHHHHHHHHHHhCCceEEEechH
Q 009537 333 GSEN--SSQETRMRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 333 ~t~n--Ss~~t~~~A~~LA~~iG~~h~~i~Id~ 363 (532)
.... .|.++.+.++++|+.+|++|+.++++.
T Consensus 51 dhglr~~s~~~~~~v~~~~~~lgi~~~v~~~~~ 83 (433)
T 1ni5_A 51 HHGLSANADAWVTHCENVCQQWQVPLVVERVQL 83 (433)
T ss_dssp CCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred ECCCCcccHHHHHHHHHHHHHcCCcEEEEEecC
Confidence 6443 356778899999999999999988763
No 50
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.0038 Score=63.40 Aligned_cols=94 Identities=12% Similarity=0.070 Sum_probs=57.0
Q ss_pred HHHHHHHhCC--CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEE
Q 009537 253 LWDYLRRSGA--SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTV 330 (532)
Q Consensus 253 L~dylrrs~~--~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~ 330 (532)
|.+.+++-+. ..++|++|||.||++++.|+. +++.. .++.++. ........ ...-...+..+
T Consensus 42 l~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~-------~~l~~---~~~~~~~-~~~~~~~~-----~~~~~~~i~vv 105 (306)
T 2wsi_A 42 LSEIFVRWSPLNGEISFSYNGGKDCQVLLLLYL-------SCLWE---YFFIKAQ-NSQFDFEF-----QSFPMQRLPTV 105 (306)
T ss_dssp HHTTTTTSCSSSSSEEEECCSCHHHHHHHHHHH-------HHHHH---HHHHHHH-HC-------------CCCCCEEEE
T ss_pred HHHHHHHcccccCCEEEEecCCHHHHHHHHHHH-------HHHhh---hcccccc-cccccccc-----cccCCCCeeEE
Confidence 3334444442 579999999999999988874 22110 0000000 00000000 00001137789
Q ss_pred EeCCCCCCHHHHHHHHHHHHHhCCceEEEech
Q 009537 331 FMGSENSSQETRMRAKKLADEIGSWHLDVSID 362 (532)
Q Consensus 331 ~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~Id 362 (532)
|.-|....++|.+-++++++.+|+.++.+..+
T Consensus 106 ~iDtg~~fpet~~fv~~~~~~ygl~l~v~~~~ 137 (306)
T 2wsi_A 106 FIDQEETFPTLENFVLETSERYCLSLYESQRQ 137 (306)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHTTEEEEECCC-
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 99988889999999999999999999888765
No 51
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.0051 Score=60.88 Aligned_cols=65 Identities=8% Similarity=-0.039 Sum_probs=51.1
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
..++|++|||.||++++.|+. ++ ... +..+..+++.|..-.++|.
T Consensus 42 ~~v~va~SGGkDS~vLL~ll~-------~~---------------~~~-------------~~~i~vv~iDtg~~~~et~ 86 (261)
T 2oq2_A 42 PHLFQTTAFGLTGLVTIDMLS-------KL---------------SEK-------------YYMPELLFIDTLHHFPQTL 86 (261)
T ss_dssp SSEEEECCCCHHHHHHHHHHH-------HH---------------TTT-------------SCCCEEEEECCSCBCHHHH
T ss_pred CCEEEEecCCHHHHHHHHHHH-------Hh---------------Ccc-------------CCCeeEEEecCCCCCHHHH
Confidence 479999999999999888874 22 110 0025678888877789999
Q ss_pred HHHHHHHHHhCC----ceEEEech
Q 009537 343 MRAKKLADEIGS----WHLDVSID 362 (532)
Q Consensus 343 ~~A~~LA~~iG~----~h~~i~Id 362 (532)
+.++++++.+|+ .++.+..+
T Consensus 87 ~~v~~~~~~~gl~~~~~l~v~~~~ 110 (261)
T 2oq2_A 87 TLKNEIEKKYYQPKNQTIHVYKPD 110 (261)
T ss_dssp HHHHHHHHHHTGGGTCCCEEECST
T ss_pred HHHHHHHHHhCCCCCCCeEEEecC
Confidence 999999999999 88888765
No 52
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=96.36 E-value=0.011 Score=60.57 Aligned_cols=67 Identities=16% Similarity=0.129 Sum_probs=50.8
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
.+++|++|||.||++++.|+. ++.. -... .+..++.-|....++|.
T Consensus 47 ~~ivVa~SGGkDS~vLL~Ll~-------~~~~------------~~~~---------------~i~vv~vDtg~~~~et~ 92 (325)
T 1zun_A 47 DNPVMLYSIGKDSAVMLHLAR-------KAFF------------PGKL---------------PFPVMHVDTRWKFQEMY 92 (325)
T ss_dssp SSEEEECCSSHHHHHHHHHHH-------HHHT------------TSCC---------------SSCEEEECCSCCCHHHH
T ss_pred CCEEEEEcChHHHHHHHHHHH-------Hhcc------------ccCC---------------CEEEEEEECCCCCHHHH
Confidence 589999999999999888774 3311 0011 25567778777788999
Q ss_pred HHHHHHHHHhCCceEEEechH
Q 009537 343 MRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 343 ~~A~~LA~~iG~~h~~i~Id~ 363 (532)
+.++++|+++|+.+..+..+.
T Consensus 93 ~~v~~~~~~~gi~l~v~~~~~ 113 (325)
T 1zun_A 93 RFRDQMVEEMGLDLITHINPD 113 (325)
T ss_dssp HHHHHHHHTTTCCEEEECC--
T ss_pred HHHHHHHHHcCCCEEEEeCch
Confidence 999999999999999988754
No 53
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=95.83 E-value=0.032 Score=55.48 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=50.4
Q ss_pred CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhcccCCCCCCCchhhccCCeEEEEEeCCCCCCHHHH
Q 009537 263 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 342 (532)
Q Consensus 263 ~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~~~~~~~~~~~~i~~~~~~~~p~~~~e~~~~~~~t~~m~t~nSs~~t~ 342 (532)
..++|++| |.||++++.|+. + ++. .+..+++-|....++|.
T Consensus 55 ~~i~Va~S-GkDS~vLL~Ll~-------~---------------~~~----------------~i~vv~iDtg~~~~et~ 95 (275)
T 2goy_A 55 DELWISFS-GAEDVVLVDMAW-------K---------------LNR----------------NVKVFSLDTGRLHPETY 95 (275)
T ss_dssp TTEEEECC-SSTTHHHHHHHH-------H---------------HCT----------------TCCEEEECCSCCCHHHH
T ss_pred CCEEEEee-cHHHHHHHHHHH-------H---------------hCC----------------CceEEEEeCCCCCHHHH
Confidence 68999999 999999888774 2 221 14567788877789999
Q ss_pred HHHHHHHHHhCCceEEEechH
Q 009537 343 MRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 343 ~~A~~LA~~iG~~h~~i~Id~ 363 (532)
+.++++++.+|+.+..+..+.
T Consensus 96 ~~v~~~~~~~gi~l~v~~~~~ 116 (275)
T 2goy_A 96 RFIDQVREHYGIAIDVLSPDP 116 (275)
T ss_dssp HHHHHHHHHHTCCCEEECCCH
T ss_pred HHHHHHHHHHCCeEEEEeCCc
Confidence 999999999999999887764
No 54
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=91.54 E-value=0.44 Score=48.33 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=58.3
Q ss_pred HHHHhhHHHHHHHHHHHhCC--CeEEEecCCCcchHHHHHHHHHHHHHHHHHHhc---CchhHHHHHHHhcccCCCCCCC
Q 009537 243 EEIAFGPGCWLWDYLRRSGA--SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIAN---GDEQVKADAIRIGRYANGEFPT 317 (532)
Q Consensus 243 eei~~~~a~~L~dylrrs~~--~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a~~~---~~~~~~~~~~~i~~~~~~~~p~ 317 (532)
+.|...+..-|..-+.+-+. ..++|+.|||.||++++.|+. +++.. .+.+.-+.-++... .|.
T Consensus 37 ~qir~S~~~iLrea~~~f~~~~~~ialSfSGGKDStVLLhL~~-------kal~~~~~~~~~~~~~~~~~~~-----~p~ 104 (308)
T 3fwk_A 37 RAINTTKSILINETFPKWSPLNGEISFSYNGGKDCQVLLLLYL-------SCLWEYYIVKLSQSQFDGKFHR-----FPL 104 (308)
T ss_dssp HHHHHHHHHHHHHTTTTSCSSSSSEEEECCSSHHHHHHHHHHH-------HHHHHHHTCCE-------------------
T ss_pred HHHHHHHHHHHHHHHHHcccccCCEEEEecCChhHHHHHHHHH-------HHhhhhcccccccccccccccc-----cCC
Confidence 34444444444444444443 569999999999999888874 33210 00000000000000 000
Q ss_pred chhhccCCeEEEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEe
Q 009537 318 ESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVS 360 (532)
Q Consensus 318 ~~~e~~~~~~~t~~m~t~nSs~~t~~~A~~LA~~iG~~h~~i~ 360 (532)
..+-.+|..|...-+||.+-..++++.+|....++.
T Consensus 105 -------~~ipvifiDTG~~FpET~ef~d~~~~~ygL~L~v~~ 140 (308)
T 3fwk_A 105 -------TKLPTVFIDHDDTFKTLENFIEETSLRYSLSLYESD 140 (308)
T ss_dssp ----------EEEECCCTTCCHHHHHHHHHHHHHTTEEEEECC
T ss_pred -------CCccEEEEeCCCCCHHHHHHHHHHHHHhCCcEEEeC
Confidence 136788999999999999999999999998776653
No 55
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=40.49 E-value=56 Score=31.65 Aligned_cols=68 Identities=12% Similarity=0.060 Sum_probs=39.3
Q ss_pred HHhCCCeEEEEccCCC--ccCCc--------HHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEEEE-eCCcEEE
Q 009537 101 LALNGVEVFMNASGSH--HQLRK--------LDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSCVV-VNGDMIA 169 (532)
Q Consensus 101 lal~GaeIIlnpSaS~--~~~~k--------~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~I~-~nG~ila 169 (532)
.+.+|||||+-|=.+- +.... .......++..|++++++++.-...-.+++ .+|. +++++ ++|+++.
T Consensus 49 A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~G~~~~~~~~-~~yN-s~~~i~~~G~i~~ 126 (281)
T 3p8k_A 49 NMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNN-QIFN-TAFSVNKSGQLIN 126 (281)
T ss_dssp HCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEEEEEEEEETT-EEEE-EEEEECTTSCEEE
T ss_pred HHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEEeeeEEccCC-cEEE-EEEEEcCCCeEEE
Confidence 3457999999995432 22221 123456678889999887665322111213 3453 44445 8999875
Q ss_pred e
Q 009537 170 Q 170 (532)
Q Consensus 170 q 170 (532)
.
T Consensus 127 ~ 127 (281)
T 3p8k_A 127 E 127 (281)
T ss_dssp E
T ss_pred E
Confidence 4
No 56
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=30.42 E-value=1.2e+02 Score=29.16 Aligned_cols=69 Identities=13% Similarity=0.135 Sum_probs=39.3
Q ss_pred HHHhCCCeEEEEccCCC--ccCCc---------HHHHHHHHHHHHHHhCCeEEEEcCCcCCCCceeeeccEEEE-eCCcE
Q 009537 100 DLALNGVEVFMNASGSH--HQLRK---------LDYRIRAFISATHSRGGVYMYSNQQGCDGGRLYFDGCSCVV-VNGDM 167 (532)
Q Consensus 100 ~lal~GaeIIlnpSaS~--~~~~k---------~~~r~~li~~~a~~~g~~yvyaN~~G~dg~~l~fdG~S~I~-~nG~i 167 (532)
..+.+|||||+-|=.+- +.... .......++..|++++++++.--. -.++++.+|. +++++ ++|++
T Consensus 48 ~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~-~~~~~~~~yN-s~~~i~~~G~i 125 (283)
T 3hkx_A 48 RASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSLP-GPEGPEQRGI-TAELADEHGEV 125 (283)
T ss_dssp HHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEEECCB-CSSCTTTCCB-EEEEECTTSCE
T ss_pred HHHHCCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHhCCEEEEEEE-EEcCCCCEEE-EEEEEcCCCcE
Confidence 34458999999995432 21110 112345678888888887764332 1222123453 44555 89998
Q ss_pred EEe
Q 009537 168 IAQ 170 (532)
Q Consensus 168 laq 170 (532)
++.
T Consensus 126 ~~~ 128 (283)
T 3hkx_A 126 LAS 128 (283)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
No 57
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=26.86 E-value=85 Score=34.31 Aligned_cols=56 Identities=23% Similarity=0.275 Sum_probs=44.6
Q ss_pred EEEeeecccCCCchH-HHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcCC
Q 009537 83 VAVEVCEELFTPIPP-HADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQQ 146 (532)
Q Consensus 83 iG~eICeDlw~P~~~-~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~~ 146 (532)
-|....-|.|||-.- ....+..|+.-|+-|.+|- |..-+.+++-++|+..++++.+
T Consensus 533 ~G~vlaSDAFFPF~D~v~~A~~aGV~aIiQPGGSi--------RD~evI~aane~giaMvfTG~R 589 (593)
T 1g8m_A 533 TAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSA--------ADEVVIEACNELGITLIHTNLR 589 (593)
T ss_dssp CCEEEEESSCCSSTHHHHHHHTTTEEEEEEECCCT--------THHHHHHHHHHHTCEEEEESCC
T ss_pred CceEEEeccccCCchhHHHHHHhCCeEEECCCCCc--------CCHHHHHHHHHcCCeEEECCCC
Confidence 467778899998543 3456789999999999983 4556888999999999998753
No 58
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=25.39 E-value=1.6e+02 Score=28.81 Aligned_cols=43 Identities=19% Similarity=0.150 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCeEEEecCCCcchHHHHHHHHHHHHHHHHH
Q 009537 250 GCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKE 292 (532)
Q Consensus 250 a~~L~dylrrs~~~g~~l~LSGGiDSs~~A~lv~~m~~~~~~a 292 (532)
-.-|.+|+-++|..|+++.=|-|==.+++..=-..+.+.++++
T Consensus 30 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 72 (297)
T 3flu_A 30 LRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKH 72 (297)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHH
Confidence 3356688888999999987776654444443333333344444
No 59
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=24.15 E-value=70 Score=30.70 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=27.5
Q ss_pred CcHHHHHhhHHHHHHHHHHHh---CCCeEEEecCCCc
Q 009537 240 SPEEEIAFGPGCWLWDYLRRS---GASGFLLPLSGGA 273 (532)
Q Consensus 240 ~peeei~~~~a~~L~dylrrs---~~~g~~l~LSGGi 273 (532)
...+++..+.|..|.+.++.. ...+++|+||||-
T Consensus 7 ~~~~~l~~~aA~~l~~~l~~~~~~~~~~~~i~lsgGs 43 (266)
T 1fs5_A 7 TTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGG 43 (266)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhcccCceEEEEcCCC
Confidence 345789999999999999873 3457999999994
No 60
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=22.64 E-value=1.9e+02 Score=22.62 Aligned_cols=48 Identities=23% Similarity=0.221 Sum_probs=30.8
Q ss_pred EEEeCCCCCCHHHH---HHHHHHHHHhCCceEEEechHHHHHHHHHhhhhhC
Q 009537 329 TVFMGSENSSQETR---MRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTG 377 (532)
Q Consensus 329 t~~m~t~nSs~~t~---~~A~~LA~~iG~~h~~i~Id~~v~a~~~~f~~~~g 377 (532)
++|..+.-..-+++ .+|+++-+..|+.+..+||+.- .+....+...+|
T Consensus 5 ~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~-~~~~~~l~~~~g 55 (93)
T 1t1v_A 5 RVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD-NALRDEMRTLAG 55 (93)
T ss_dssp EEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC-HHHHHHHHHHTT
T ss_pred EEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC-HHHHHHHHHHhC
Confidence 45655444444333 7899999999999999999742 233333444445
No 61
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=22.52 E-value=1.2e+02 Score=26.21 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCHHH---HHHHHHHHHHhCCceEEEechH
Q 009537 328 YTVFMGSENSSQET---RMRAKKLADEIGSWHLDVSIDT 363 (532)
Q Consensus 328 ~t~~m~t~nSs~~t---~~~A~~LA~~iG~~h~~i~Id~ 363 (532)
+.+|..+....-++ -.+|+.|-+..|+.|.++||+.
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~ 40 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAA 40 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred EEEEecCCCCCccchHHHHHHHHHHHHCCCceEEEECCC
Confidence 46676554444333 3799999999999999999973
No 62
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=22.36 E-value=2.1e+02 Score=29.34 Aligned_cols=69 Identities=10% Similarity=0.133 Sum_probs=39.6
Q ss_pred HHhCCCeEEEEccCC--CccCCc--------------HHHHHHHHHHHHHHhCCeEEEEcC-CcCCCCceeeeccEEEE-
Q 009537 101 LALNGVEVFMNASGS--HHQLRK--------------LDYRIRAFISATHSRGGVYMYSNQ-QGCDGGRLYFDGCSCVV- 162 (532)
Q Consensus 101 lal~GaeIIlnpSaS--~~~~~k--------------~~~r~~li~~~a~~~g~~yvyaN~-~G~dg~~l~fdG~S~I~- 162 (532)
.+.+||+||+-|=.+ ++.+.. .......++..|++++++++..-. ....+++.+|. +++++
T Consensus 108 A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yN-sa~vi~ 186 (405)
T 2vhh_A 108 AAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWN-TAVVIS 186 (405)
T ss_dssp HHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEEEEEEEETTTTTEEEE-EEEEEC
T ss_pred HHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEEeceecccCCCCcEEE-EEEEEC
Confidence 346899999999543 332210 122346678889999888775322 11111233453 34444
Q ss_pred eCCcEEEe
Q 009537 163 VNGDMIAQ 170 (532)
Q Consensus 163 ~nG~ilaq 170 (532)
++|++++.
T Consensus 187 p~G~i~~~ 194 (405)
T 2vhh_A 187 NSGRYLGK 194 (405)
T ss_dssp TTSCEEEE
T ss_pred CCCeEEEE
Confidence 89998864
No 63
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=21.93 E-value=15 Score=32.43 Aligned_cols=85 Identities=11% Similarity=0.266 Sum_probs=50.3
Q ss_pred hcCCCEeeeceeeEEEe-----ecCCChHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHhhcccCcCcCCcccccccCCC
Q 009537 388 DMGMTYEELSVYGRLRK-----IFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSP 462 (532)
Q Consensus 388 dmGmtY~~L~~~~rlr~-----~~~~gp~~m~~~L~~~w~~~~~~~~i~~kVk~ff~~~~~nrhKr~~~~Ps~h~e~ys~ 462 (532)
++|+|-.++-.+..+.. .....|..+..++ ++++.+|...+.+--.-=.+.+-.++ +.-+-
T Consensus 27 ~LgLs~~E~~lLl~L~~~~~~g~~~ps~~~LA~~~------~~s~~~v~~~L~~L~~KGlI~i~~~~--------d~~g~ 92 (135)
T 2v79_A 27 QLGLNETELILLLKIKMHLEKGSYFPTPNQLQEGM------SISVEECTNRLRMFIQKGFLFIEECE--------DQNGI 92 (135)
T ss_dssp HHTCCHHHHHHHHHHHHHHTTTCCSCCHHHHHTTS------SSCHHHHHHHHHHHHHHTSCEEEEEE--------CTTCC
T ss_pred HhCCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH------CcCHHHHHHHHHHHHHCCCEEEEeEe--------cCCCc
Confidence 46777777666666544 3456777777665 47788888887764443222221111 00011
Q ss_pred CCCCccccccccCCCCCcchhhHHHHHHhhhcC
Q 009537 463 EDNRFDLRQFLYNARWPYQFRKIDELVKELDGE 495 (532)
Q Consensus 463 ddnr~d~r~fly~~~~~~~f~~i~~~~~~~~~~ 495 (532)
-.++|||.|. |.|++.+++.-+.+
T Consensus 93 ~~~~ydL~pL---------~ekL~~~~~~~~~~ 116 (135)
T 2v79_A 93 KFEKYSLQPL---------WGKLYEYIQLAQNQ 116 (135)
T ss_dssp EEEEEECHHH---------HHHHHHHHHHHHC-
T ss_pred eEEEeeHHHH---------HHHHHHHHHHHHHH
Confidence 1268888887 78999998765443
No 64
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=20.77 E-value=2e+02 Score=28.45 Aligned_cols=35 Identities=9% Similarity=0.145 Sum_probs=22.8
Q ss_pred HHhhHHHHHHHHHHHhCCCeEEEecCCCcchHHHH
Q 009537 245 IAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVA 279 (532)
Q Consensus 245 i~~~~a~~L~dylrrs~~~g~~l~LSGGiDSs~~A 279 (532)
|-..--.-|-+|+-.+|..|+++.=|-|==.+++.
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~ 60 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANFSEQFAITD 60 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCcccCCH
Confidence 33333345668888899999888766664444443
No 65
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=20.18 E-value=1.1e+02 Score=32.95 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=40.8
Q ss_pred EeeecccCCCch-HHHHHHhCCCeEEEEccCCCccCCcHHHHHHHHHHHHHHhCCeEEEEcC
Q 009537 85 VEVCEELFTPIP-PHADLALNGVEVFMNASGSHHQLRKLDYRIRAFISATHSRGGVYMYSNQ 145 (532)
Q Consensus 85 ~eICeDlw~P~~-~~~~lal~GaeIIlnpSaS~~~~~k~~~r~~li~~~a~~~g~~yvyaN~ 145 (532)
....-|.|||-. .....+..|+.-|+-|.+|- |..-+.+++-++|+..+++..
T Consensus 476 ~vlASDAFFPF~D~ve~Aa~aGV~aIiQPGGSi--------RD~evI~aane~giaMvfTG~ 529 (534)
T 4ehi_A 476 CVLASEAFFPFRDSIDEASKVGVKAIVEPGGSI--------RDDEVVKAADEYGMALYFTGV 529 (534)
T ss_dssp CEEECSSCCCSTHHHHHHHHTTCCEEEECCCCT--------THHHHHHHHHHHTCEEEECSC
T ss_pred eEEEeccccCCCccHHHHHHcCCEEEECCCCCC--------ccHHHHHHHHHcCCeEEEcCc
Confidence 344569999853 33457789999999999983 345678899999999998765
Done!