Query 009538
Match_columns 532
No_of_seqs 133 out of 1344
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 14:20:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009538.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009538hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 2.5E-43 5.4E-48 375.1 37.1 495 3-513 72-568 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 2.8E-36 6E-41 305.9 29.9 425 1-510 58-492 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1E-33 2.3E-38 301.1 36.6 429 1-515 47-486 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 2E-32 4.4E-37 291.0 36.0 416 1-509 45-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 3.8E-32 8.2E-37 285.5 35.8 413 1-497 42-469 (493)
6 PRK09584 tppB putative tripept 100.0 1.7E-31 3.7E-36 285.5 36.0 425 2-516 55-490 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 1.6E-26 3.5E-31 250.9 39.0 317 1-380 20-343 (654)
8 PRK14995 methyl viologen resis 99.9 8.6E-24 1.9E-28 226.5 31.6 368 2-464 39-413 (495)
9 PRK03545 putative arabinose tr 99.9 1.8E-23 4E-28 217.2 30.0 340 1-506 41-381 (390)
10 TIGR00887 2A0109 phosphate:H+ 99.9 2.8E-23 6.1E-28 223.0 29.9 142 3-169 55-219 (502)
11 PRK10077 xylE D-xylose transpo 99.9 1.9E-23 4E-28 223.0 28.2 149 2-170 53-210 (479)
12 PRK09705 cynX putative cyanate 99.9 4.9E-23 1.1E-27 214.3 28.9 345 1-511 41-387 (393)
13 TIGR00903 2A0129 major facilit 99.9 8.7E-23 1.9E-27 210.0 28.6 145 1-177 23-167 (368)
14 TIGR01299 synapt_SV2 synaptic 99.9 8.7E-23 1.9E-27 224.5 29.9 138 2-170 200-350 (742)
15 PRK11551 putative 3-hydroxyphe 99.9 1.6E-22 3.4E-27 211.1 29.5 139 1-170 47-185 (406)
16 COG2814 AraJ Arabinose efflux 99.9 3.2E-22 6.9E-27 201.7 30.0 340 1-506 45-387 (394)
17 PRK10489 enterobactin exporter 99.9 1.6E-22 3.6E-27 211.9 28.7 364 2-519 50-413 (417)
18 PRK05122 major facilitator sup 99.9 4.2E-22 9.2E-27 207.5 30.4 339 2-504 49-388 (399)
19 TIGR00893 2A0114 d-galactonate 99.9 2.7E-22 5.9E-27 206.8 28.7 142 1-173 26-167 (399)
20 TIGR00898 2A0119 cation transp 99.9 3.1E-22 6.7E-27 215.1 29.7 135 3-171 126-260 (505)
21 PF00854 PTR2: POT family; In 99.9 2.7E-24 5.8E-29 222.0 13.0 366 35-448 1-370 (372)
22 TIGR00894 2A0114euk Na(+)-depe 99.9 4.3E-22 9.3E-27 211.8 29.8 146 2-176 74-220 (465)
23 TIGR00900 2A0121 H+ Antiporter 99.9 4.4E-22 9.5E-27 203.6 28.1 329 2-463 32-362 (365)
24 PRK10642 proline/glycine betai 99.9 4.5E-22 9.6E-27 213.1 29.2 134 10-166 63-204 (490)
25 TIGR00879 SP MFS transporter, 99.9 3.3E-22 7.1E-27 211.9 27.9 141 2-170 69-212 (481)
26 KOG0569 Permease of the major 99.9 1.9E-22 4.2E-27 209.1 25.0 404 6-523 62-472 (485)
27 PRK11663 regulatory protein Uh 99.9 8.1E-22 1.8E-26 207.8 29.9 137 1-168 55-191 (434)
28 PRK10504 putative transporter; 99.9 2.5E-21 5.4E-26 206.3 31.8 145 2-177 43-187 (471)
29 TIGR00892 2A0113 monocarboxyla 99.9 6.2E-22 1.3E-26 209.9 26.9 141 2-174 52-193 (455)
30 PRK15402 multidrug efflux syst 99.9 4.3E-21 9.3E-26 200.5 32.6 140 2-172 46-185 (406)
31 TIGR00711 efflux_EmrB drug res 99.9 4.9E-22 1.1E-26 212.2 25.7 366 2-464 35-410 (485)
32 PRK12382 putative transporter; 99.9 2E-21 4.2E-26 202.0 29.2 341 1-504 48-388 (392)
33 PRK09556 uhpT sugar phosphate 99.9 7.6E-22 1.7E-26 210.0 26.6 148 1-174 61-211 (467)
34 KOG0254 Predicted transporter 99.9 3.8E-22 8.3E-27 214.6 24.2 405 5-520 90-498 (513)
35 TIGR00890 2A0111 Oxalate/Forma 99.9 9.7E-22 2.1E-26 201.8 25.4 140 1-172 35-174 (377)
36 PRK10406 alpha-ketoglutarate t 99.9 3.3E-21 7.2E-26 203.1 29.7 138 7-167 63-211 (432)
37 PRK10213 nepI ribonucleoside t 99.9 5.4E-21 1.2E-25 198.9 30.6 137 1-168 52-188 (394)
38 PRK15403 multidrug efflux syst 99.9 3.8E-21 8.3E-26 201.3 29.5 144 2-176 49-192 (413)
39 PRK10091 MFS transport protein 99.9 5.4E-21 1.2E-25 198.1 29.9 140 2-172 36-175 (382)
40 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.9E-21 6.2E-26 202.2 27.6 146 1-177 40-191 (412)
41 KOG2532 Permease of the major 99.9 1.2E-21 2.6E-26 205.3 23.5 375 1-505 70-447 (466)
42 PRK11646 multidrug resistance 99.9 5.5E-21 1.2E-25 199.3 27.9 137 2-170 44-180 (400)
43 PRK12307 putative sialic acid 99.9 1.2E-20 2.6E-25 198.3 29.8 131 2-163 51-181 (426)
44 PRK09874 drug efflux system pr 99.9 9.7E-21 2.1E-25 197.5 28.4 339 6-504 56-397 (408)
45 TIGR00710 efflux_Bcr_CflA drug 99.9 4.4E-20 9.4E-25 190.8 31.5 144 1-175 37-180 (385)
46 cd06174 MFS The Major Facilita 99.9 1.4E-20 3E-25 191.0 27.1 317 2-502 32-349 (352)
47 TIGR00899 2A0120 sugar efflux 99.9 2.2E-20 4.8E-25 192.4 29.0 147 2-177 31-178 (375)
48 PRK09952 shikimate transporter 99.9 2.4E-20 5.2E-25 196.9 29.4 129 14-165 74-210 (438)
49 PF07690 MFS_1: Major Facilita 99.9 4E-21 8.6E-26 195.6 22.5 138 2-170 30-167 (352)
50 PRK11273 glpT sn-glycerol-3-ph 99.9 1.5E-20 3.3E-25 199.2 27.5 149 1-176 60-209 (452)
51 PRK11195 lysophospholipid tran 99.9 5.1E-20 1.1E-24 191.6 29.5 131 2-167 36-166 (393)
52 PRK10054 putative transporter; 99.9 2.4E-20 5.1E-25 194.2 26.6 139 1-171 40-178 (395)
53 TIGR00891 2A0112 putative sial 99.9 2.1E-20 4.6E-25 194.2 25.6 136 1-167 44-181 (405)
54 PLN00028 nitrate transmembrane 99.9 2.5E-20 5.4E-25 198.7 25.6 141 1-173 68-217 (476)
55 TIGR00881 2A0104 phosphoglycer 99.9 1.5E-20 3.3E-25 193.0 22.1 142 1-173 27-169 (379)
56 PRK11102 bicyclomycin/multidru 99.9 3.3E-19 7.2E-24 184.0 30.8 142 1-173 23-164 (377)
57 TIGR00895 2A0115 benzoate tran 99.9 1.3E-19 2.9E-24 187.4 27.5 141 2-173 50-190 (398)
58 PRK03699 putative transporter; 99.9 2.6E-19 5.5E-24 186.4 29.3 138 1-169 39-177 (394)
59 TIGR00712 glpT glycerol-3-phos 99.9 9.1E-20 2E-24 192.5 25.8 150 1-177 58-208 (438)
60 PRK03893 putative sialic acid 99.9 1.6E-19 3.4E-24 193.6 28.0 132 1-163 52-183 (496)
61 PRK11043 putative transporter; 99.9 4E-19 8.8E-24 185.2 29.9 140 1-171 38-177 (401)
62 PRK15075 citrate-proton sympor 99.9 2.9E-19 6.4E-24 188.4 28.6 123 18-163 70-200 (434)
63 PRK03633 putative MFS family t 99.9 4E-19 8.6E-24 184.1 28.4 126 1-157 38-163 (381)
64 PRK11652 emrD multidrug resist 99.9 7.1E-19 1.5E-23 182.9 30.3 138 1-169 40-177 (394)
65 COG2271 UhpC Sugar phosphate p 99.8 1.2E-19 2.6E-24 180.9 22.3 146 1-177 61-208 (448)
66 PRK10473 multidrug efflux syst 99.8 1.2E-18 2.7E-23 181.0 31.2 139 2-171 36-174 (392)
67 TIGR00897 2A0118 polyol permea 99.8 2.3E-18 5.1E-23 179.7 33.0 136 1-163 45-181 (402)
68 KOG1330 Sugar transporter/spin 99.8 1.4E-20 3E-25 189.2 13.4 146 1-177 65-211 (493)
69 PRK15011 sugar efflux transpor 99.8 1.6E-18 3.4E-23 180.4 29.0 145 2-177 49-196 (393)
70 PF05977 MFS_3: Transmembrane 99.8 2.6E-18 5.6E-23 183.2 30.6 327 3-465 44-370 (524)
71 TIGR00883 2A0106 metabolite-pr 99.8 1.3E-18 2.9E-23 179.6 27.2 128 18-168 49-184 (394)
72 PRK08633 2-acyl-glycerophospho 99.8 1.4E-18 3E-23 204.8 30.9 119 4-150 47-165 (1146)
73 PRK10133 L-fucose transporter; 99.8 1.5E-18 3.3E-23 182.9 27.0 119 1-147 58-176 (438)
74 PRK06814 acylglycerophosphoeth 99.8 1.1E-18 2.4E-23 205.4 28.6 134 5-169 53-189 (1140)
75 PF00083 Sugar_tr: Sugar (and 99.8 3.5E-24 7.6E-29 226.8 -16.6 398 4-519 46-450 (451)
76 TIGR00902 2A0127 phenyl propri 99.8 5.1E-18 1.1E-22 175.9 29.6 332 1-499 36-373 (382)
77 TIGR00889 2A0110 nucleoside tr 99.8 9.2E-18 2E-22 176.0 30.5 368 1-511 35-408 (418)
78 TIGR00896 CynX cyanate transpo 99.8 8.6E-18 1.9E-22 172.3 26.8 132 1-165 32-165 (355)
79 PRK11010 ampG muropeptide tran 99.8 2.6E-17 5.6E-22 176.0 30.8 125 19-171 60-191 (491)
80 PRK09528 lacY galactoside perm 99.8 7.7E-18 1.7E-22 176.8 25.7 356 1-505 43-403 (420)
81 PRK15034 nitrate/nitrite trans 99.8 3.1E-17 6.8E-22 171.1 27.4 147 1-174 67-231 (462)
82 KOG0255 Synaptic vesicle trans 99.8 3.4E-17 7.3E-22 176.9 28.4 148 2-183 116-265 (521)
83 PRK11128 putative 3-phenylprop 99.8 6.1E-17 1.3E-21 167.8 28.4 132 1-167 36-171 (382)
84 TIGR00885 fucP L-fucose:H+ sym 99.8 3.2E-17 6.9E-22 171.4 26.4 140 1-168 35-200 (410)
85 TIGR00792 gph sugar (Glycoside 99.8 2.7E-17 5.8E-22 173.3 24.9 331 1-465 32-381 (437)
86 KOG0252 Inorganic phosphate tr 99.8 1E-17 2.2E-22 167.9 19.9 413 3-520 83-512 (538)
87 TIGR00886 2A0108 nitrite extru 99.8 2.1E-17 4.5E-22 169.7 22.8 132 1-163 34-176 (366)
88 TIGR00882 2A0105 oligosacchari 99.8 9.9E-17 2.1E-21 167.0 27.7 143 1-172 35-180 (396)
89 PRK11902 ampG muropeptide tran 99.8 1E-15 2.2E-20 159.8 30.4 139 1-169 31-176 (402)
90 TIGR00901 2A0125 AmpG-related 99.8 2.6E-16 5.5E-21 161.4 25.1 142 2-172 21-175 (356)
91 COG2223 NarK Nitrate/nitrite t 99.7 4.9E-16 1.1E-20 155.4 24.6 354 1-507 46-403 (417)
92 TIGR00805 oat sodium-independe 99.7 9.4E-16 2E-20 168.2 25.5 166 1-173 65-279 (633)
93 PF06609 TRI12: Fungal trichot 99.7 4.7E-15 1E-19 158.1 28.6 138 3-172 77-214 (599)
94 KOG2615 Permease of the major 99.7 1E-15 2.3E-20 150.2 20.6 114 4-149 68-181 (451)
95 COG0738 FucP Fucose permease [ 99.7 2.4E-15 5.3E-20 149.5 23.1 121 1-149 45-165 (422)
96 KOG3764 Vesicular amine transp 99.7 5.1E-16 1.1E-20 153.2 18.0 142 3-174 105-246 (464)
97 TIGR01301 GPH_sucrose GPH fami 99.7 1.3E-14 2.8E-19 152.6 27.5 412 2-509 37-475 (477)
98 KOG0253 Synaptic vesicle trans 99.7 1.3E-14 2.9E-19 141.5 21.8 169 3-207 112-282 (528)
99 TIGR00806 rfc RFC reduced fola 99.6 3.1E-14 6.7E-19 146.4 24.0 129 1-162 58-187 (511)
100 KOG2504 Monocarboxylate transp 99.6 1.7E-14 3.8E-19 153.2 22.8 398 2-505 79-476 (509)
101 KOG2533 Permease of the major 99.6 8E-14 1.7E-18 146.9 25.8 145 3-178 80-230 (495)
102 PRK09848 glucuronide transport 99.6 8.9E-14 1.9E-18 147.3 26.1 108 325-465 275-389 (448)
103 TIGR00788 fbt folate/biopterin 99.6 1E-13 2.2E-18 147.4 26.1 344 1-465 58-414 (468)
104 PTZ00207 hypothetical protein; 99.6 9.3E-13 2E-17 141.4 29.3 143 2-173 60-203 (591)
105 PRK10429 melibiose:sodium symp 99.6 2.1E-13 4.6E-18 145.5 24.3 144 1-168 39-194 (473)
106 PRK09669 putative symporter Ya 99.6 2.7E-13 5.8E-18 143.5 23.9 146 1-169 42-198 (444)
107 PF03825 Nuc_H_symport: Nucleo 99.6 2E-12 4.2E-17 134.2 28.1 126 352-506 270-396 (400)
108 TIGR02718 sider_RhtX_FptX side 99.6 2E-12 4.4E-17 134.3 28.3 145 2-173 34-182 (390)
109 PF13347 MFS_2: MFS/sugar tran 99.6 2.3E-13 5E-18 143.3 21.3 327 2-465 35-385 (428)
110 COG2807 CynX Cyanate permease 99.5 5.4E-12 1.2E-16 124.1 24.5 313 1-466 44-361 (395)
111 PRK11462 putative transporter; 99.4 1.4E-10 3.1E-15 123.2 25.6 144 2-168 43-197 (460)
112 PF01306 LacY_symp: LacY proto 99.4 3.8E-11 8.3E-16 122.9 19.5 354 1-506 40-401 (412)
113 PF03209 PUCC: PUCC protein; 99.4 1.6E-09 3.4E-14 109.4 30.4 325 19-465 29-364 (403)
114 TIGR00880 2_A_01_02 Multidrug 99.3 6E-12 1.3E-16 109.7 8.3 133 10-173 4-136 (141)
115 PF11700 ATG22: Vacuole efflux 99.3 1E-08 2.2E-13 108.7 31.7 88 401-503 379-466 (477)
116 TIGR01272 gluP glucose/galacto 99.3 2.7E-10 5.9E-15 114.5 18.5 81 81-167 9-105 (310)
117 COG2211 MelB Na+/melibiose sym 99.2 3.5E-09 7.5E-14 109.8 25.9 331 2-465 46-397 (467)
118 KOG4686 Predicted sugar transp 99.2 9.5E-11 2.1E-15 111.0 11.8 122 4-152 79-200 (459)
119 PRK05122 major facilitator sup 99.1 4.5E-10 9.7E-15 117.0 12.6 142 5-177 250-391 (399)
120 TIGR00889 2A0110 nucleoside tr 99.1 6.9E-10 1.5E-14 116.5 12.5 146 4-176 251-403 (418)
121 PF03137 OATP: Organic Anion T 99.1 2.1E-11 4.6E-16 130.8 -0.6 171 1-178 35-253 (539)
122 PRK09528 lacY galactoside perm 99.0 1.4E-09 3.1E-14 114.1 11.8 139 4-173 262-401 (420)
123 KOG3626 Organic anion transpor 99.0 3E-08 6.5E-13 107.2 21.7 170 1-177 129-345 (735)
124 TIGR00890 2A0111 Oxalate/Forma 99.0 2E-09 4.4E-14 110.2 11.9 137 2-167 238-374 (377)
125 PRK09874 drug efflux system pr 99.0 2.6E-09 5.6E-14 111.4 12.8 137 7-174 261-397 (408)
126 PRK15011 sugar efflux transpor 99.0 3.1E-09 6.7E-14 110.6 13.1 139 2-172 250-388 (393)
127 KOG2563 Permease of the major 99.0 5.1E-08 1.1E-12 98.9 20.2 120 4-148 79-200 (480)
128 KOG2325 Predicted transporter/ 99.0 4.4E-09 9.5E-14 109.3 12.7 116 3-146 70-187 (488)
129 TIGR01299 synapt_SV2 synaptic 99.0 3E-09 6.5E-14 117.9 11.8 133 8-172 599-731 (742)
130 cd06174 MFS The Major Facilita 99.0 5.6E-09 1.2E-13 105.7 13.0 139 2-171 209-348 (352)
131 PRK12382 putative transporter; 99.0 3.2E-09 6.9E-14 110.3 11.4 137 6-173 251-387 (392)
132 TIGR00899 2A0120 sugar efflux 99.0 4.7E-09 1E-13 107.9 12.6 139 2-172 233-371 (375)
133 KOG2816 Predicted transporter 98.9 5.2E-08 1.1E-12 102.3 18.4 311 14-464 72-392 (463)
134 PRK03893 putative sialic acid 98.9 3.5E-08 7.5E-13 105.9 15.8 133 2-163 309-441 (496)
135 PRK03633 putative MFS family t 98.9 2E-08 4.4E-13 103.9 13.1 136 2-171 233-368 (381)
136 PRK10642 proline/glycine betai 98.9 3.7E-08 8E-13 105.7 15.0 140 3-171 285-426 (490)
137 PF03092 BT1: BT1 family; Int 98.8 2.3E-07 4.9E-12 97.7 19.4 134 19-176 39-176 (433)
138 PRK10489 enterobactin exporter 98.8 2.5E-08 5.5E-13 104.5 12.0 145 2-177 257-401 (417)
139 PRK03545 putative arabinose tr 98.8 5.8E-08 1.3E-12 100.8 14.5 141 2-175 239-380 (390)
140 TIGR00879 SP MFS transporter, 98.8 6E-08 1.3E-12 102.6 14.0 155 2-176 317-471 (481)
141 PRK09556 uhpT sugar phosphate 98.8 3.6E-08 7.8E-13 105.1 11.9 142 2-172 292-446 (467)
142 PRK11551 putative 3-hydroxyphe 98.8 5.8E-08 1.3E-12 101.3 12.8 138 2-170 253-391 (406)
143 COG2270 Permeases of the major 98.7 5.9E-06 1.3E-10 83.7 25.4 57 410-466 349-405 (438)
144 PRK03699 putative transporter; 98.7 4E-08 8.6E-13 102.3 10.3 137 2-170 239-375 (394)
145 PF05631 DUF791: Protein of un 98.7 1.2E-06 2.7E-11 87.3 20.0 143 2-171 67-212 (354)
146 PRK09705 cynX putative cyanate 98.7 8.6E-08 1.9E-12 99.8 12.2 145 2-177 238-383 (393)
147 TIGR00892 2A0113 monocarboxyla 98.7 1.5E-07 3.3E-12 99.9 14.2 139 2-170 274-416 (455)
148 TIGR00883 2A0106 metabolite-pr 98.7 9.9E-08 2.1E-12 98.3 11.0 134 2-164 253-390 (394)
149 KOG3098 Uncharacterized conser 98.7 1.8E-05 3.9E-10 82.4 27.1 105 10-146 56-160 (461)
150 PRK10077 xylE D-xylose transpo 98.7 4.5E-07 9.7E-12 96.8 15.9 144 6-176 308-458 (479)
151 TIGR00891 2A0112 putative sial 98.7 1.4E-07 3.1E-12 97.8 11.3 128 2-159 272-400 (405)
152 TIGR00902 2A0127 phenyl propri 98.6 2.5E-07 5.5E-12 95.8 12.9 135 2-169 238-373 (382)
153 TIGR00792 gph sugar (Glycoside 98.6 1.1E-07 2.4E-12 100.2 10.2 128 3-154 256-384 (437)
154 TIGR00897 2A0118 polyol permea 98.6 3.4E-07 7.3E-12 95.6 13.7 143 2-172 255-398 (402)
155 TIGR00893 2A0114 d-galactonate 98.6 4.5E-07 9.8E-12 93.1 12.2 145 2-171 249-395 (399)
156 PRK09952 shikimate transporter 98.6 7.3E-07 1.6E-11 94.2 13.9 139 8-173 290-431 (438)
157 COG2814 AraJ Arabinose efflux 98.6 1.1E-06 2.4E-11 89.5 14.5 145 1-177 244-388 (394)
158 TIGR00710 efflux_Bcr_CflA drug 98.6 2.7E-06 5.9E-11 87.6 17.4 140 318-508 44-183 (385)
159 PRK11663 regulatory protein Uh 98.5 3.3E-06 7.2E-11 89.1 18.1 139 318-507 62-200 (434)
160 KOG1330 Sugar transporter/spin 98.5 5.9E-08 1.3E-12 98.8 4.4 152 317-518 71-222 (493)
161 TIGR00882 2A0105 oligosacchari 98.5 4.2E-07 9E-12 94.6 11.0 134 5-169 255-389 (396)
162 TIGR00880 2_A_01_02 Multidrug 98.5 1.7E-06 3.6E-11 74.9 13.0 130 324-504 8-137 (141)
163 PRK11010 ampG muropeptide tran 98.5 8.6E-07 1.9E-11 95.1 12.8 146 2-175 256-403 (491)
164 PRK15402 multidrug efflux syst 98.5 2.4E-06 5.1E-11 89.2 15.2 141 2-169 249-389 (406)
165 PRK11273 glpT sn-glycerol-3-ph 98.5 8.1E-07 1.8E-11 94.3 10.8 141 2-171 287-431 (452)
166 PRK15075 citrate-proton sympor 98.4 1.8E-06 3.9E-11 91.1 13.0 126 2-155 272-399 (434)
167 PRK10091 MFS transport protein 98.4 1.7E-06 3.7E-11 89.6 12.4 138 2-170 233-371 (382)
168 PF07690 MFS_1: Major Facilita 98.4 4.8E-06 1E-10 84.4 15.4 137 318-505 36-172 (352)
169 PRK10054 putative transporter; 98.4 6E-06 1.3E-10 86.0 16.3 137 319-507 48-184 (395)
170 PRK11128 putative 3-phenylprop 98.4 2.2E-06 4.9E-11 88.7 12.5 133 2-167 238-371 (382)
171 TIGR02718 sider_RhtX_FptX side 98.4 1.9E-06 4.1E-11 89.5 11.8 144 2-169 241-385 (390)
172 TIGR02332 HpaX 4-hydroxyphenyl 98.4 6.9E-06 1.5E-10 86.1 16.1 145 320-509 49-193 (412)
173 PF11700 ATG22: Vacuole efflux 98.4 2.2E-06 4.8E-11 91.0 12.2 147 2-173 315-466 (477)
174 PRK10504 putative transporter; 98.4 1.9E-06 4.2E-11 91.8 11.9 124 2-153 295-418 (471)
175 TIGR01272 gluP glucose/galacto 98.4 1.8E-06 4E-11 86.8 10.8 129 2-164 176-304 (310)
176 PRK10213 nepI ribonucleoside t 98.4 1.3E-05 2.9E-10 83.4 17.7 129 321-500 62-190 (394)
177 TIGR00900 2A0121 H+ Antiporter 98.4 7.5E-06 1.6E-10 83.4 15.4 117 318-464 38-154 (365)
178 PRK11902 ampG muropeptide tran 98.4 3.3E-06 7.2E-11 88.1 12.9 139 2-171 243-386 (402)
179 PRK12307 putative sialic acid 98.4 3E-06 6.4E-11 89.0 12.6 129 2-159 264-392 (426)
180 PRK14995 methyl viologen resis 98.4 1.4E-05 3E-10 85.9 17.8 139 318-507 45-184 (495)
181 COG2271 UhpC Sugar phosphate p 98.4 2E-06 4.3E-11 87.0 10.3 146 1-174 285-433 (448)
182 PRK11646 multidrug resistance 98.4 1.1E-05 2.3E-10 84.3 16.3 129 326-506 58-186 (400)
183 PLN00028 nitrate transmembrane 98.4 2.9E-06 6.3E-11 90.7 12.3 140 2-174 286-432 (476)
184 PRK10473 multidrug efflux syst 98.4 1.1E-05 2.4E-10 83.8 16.3 138 320-508 44-181 (392)
185 PRK09669 putative symporter Ya 98.4 2.2E-06 4.9E-11 90.7 11.3 125 7-154 267-392 (444)
186 PRK09848 glucuronide transport 98.3 2.4E-06 5.3E-11 90.5 11.1 118 13-153 273-391 (448)
187 TIGR00711 efflux_EmrB drug res 98.3 4.1E-06 8.8E-11 89.4 12.7 139 318-507 41-179 (485)
188 PRK15403 multidrug efflux syst 98.3 1.3E-05 2.8E-10 84.1 15.7 135 323-508 60-194 (413)
189 TIGR00881 2A0104 phosphoglycer 98.3 2.7E-06 5.8E-11 87.1 10.1 139 318-507 34-173 (379)
190 PRK11102 bicyclomycin/multidru 98.3 1.9E-05 4.2E-10 81.3 16.0 136 321-507 33-168 (377)
191 TIGR00712 glpT glycerol-3-phos 98.3 3.7E-06 8E-11 88.9 10.7 144 2-174 285-432 (438)
192 PF13347 MFS_2: MFS/sugar tran 98.3 7.2E-06 1.6E-10 86.4 12.6 128 4-154 260-388 (428)
193 COG0477 ProP Permeases of the 98.3 5.3E-06 1.1E-10 81.2 10.7 132 5-164 40-174 (338)
194 TIGR00898 2A0119 cation transp 98.3 4.8E-06 1.1E-10 89.6 11.3 128 12-170 363-490 (505)
195 PRK10406 alpha-ketoglutarate t 98.3 1.1E-05 2.3E-10 85.1 13.6 143 2-172 277-421 (432)
196 TIGR00896 CynX cyanate transpo 98.3 2.9E-06 6.2E-11 86.9 9.0 120 2-152 230-350 (355)
197 PRK10429 melibiose:sodium symp 98.3 1.8E-05 3.9E-10 84.5 15.2 128 6-153 268-396 (473)
198 TIGR00895 2A0115 benzoate tran 98.2 6.3E-06 1.4E-10 85.0 10.6 110 320-464 58-167 (398)
199 PF05977 MFS_3: Transmembrane 98.2 8.5E-06 1.8E-10 87.5 11.8 139 2-171 252-390 (524)
200 PRK08633 2-acyl-glycerophospho 98.2 1E-05 2.2E-10 96.0 12.9 131 2-163 266-398 (1146)
201 PRK10133 L-fucose transporter; 98.2 1E-05 2.2E-10 85.6 11.5 135 1-169 292-427 (438)
202 TIGR00886 2A0108 nitrite extru 98.2 5.5E-05 1.2E-09 77.4 16.2 111 318-463 41-151 (366)
203 TIGR00894 2A0114euk Na(+)-depe 98.2 1.5E-05 3.2E-10 84.9 11.9 137 321-505 83-219 (465)
204 PRK15034 nitrate/nitrite trans 98.1 2.9E-05 6.2E-10 81.7 13.5 145 14-177 296-456 (462)
205 TIGR00887 2A0109 phosphate:H+ 98.1 2.8E-05 6.1E-10 83.7 13.7 128 15-169 346-483 (502)
206 TIGR00903 2A0129 major facilit 98.1 5.9E-05 1.3E-09 77.8 15.1 91 401-508 78-168 (368)
207 KOG3762 Predicted transporter 98.1 0.00021 4.6E-09 74.5 18.6 142 317-509 409-551 (618)
208 PF02487 CLN3: CLN3 protein; 98.1 0.0013 2.9E-08 67.5 23.8 128 13-176 68-196 (402)
209 TIGR00885 fucP L-fucose:H+ sym 98.1 9.5E-05 2.1E-09 77.4 16.0 114 317-462 41-154 (410)
210 KOG3764 Vesicular amine transp 98.1 1.5E-05 3.3E-10 79.9 9.3 140 317-507 109-249 (464)
211 PRK11652 emrD multidrug resist 98.1 0.00017 3.8E-09 74.8 17.3 138 319-507 48-185 (394)
212 COG2270 Permeases of the major 98.0 2.1E-05 4.6E-10 79.8 9.8 138 2-170 286-424 (438)
213 TIGR00924 yjdL_sub1_fam amino 98.0 6.1E-05 1.3E-09 80.5 13.8 133 321-504 55-191 (475)
214 COG2223 NarK Nitrate/nitrite t 98.0 3E-05 6.5E-10 78.6 10.5 151 1-177 251-403 (417)
215 PRK06814 acylglycerophosphoeth 98.0 2.9E-05 6.3E-10 92.1 11.9 151 2-163 259-410 (1140)
216 TIGR01301 GPH_sucrose GPH fami 98.0 0.00016 3.6E-09 76.5 15.9 174 317-510 42-223 (477)
217 PRK11195 lysophospholipid tran 98.0 8.5E-05 1.8E-09 77.3 13.6 136 2-169 239-374 (393)
218 PRK11043 putative transporter; 98.0 0.00012 2.7E-09 76.1 14.5 127 2-155 236-362 (401)
219 PRK09584 tppB putative tripept 97.9 0.00032 6.9E-09 75.5 16.6 112 356-506 89-202 (500)
220 PRK10207 dipeptide/tripeptide 97.9 0.00021 4.5E-09 76.6 15.0 93 342-464 74-169 (489)
221 PRK15462 dipeptide/tripeptide 97.9 0.00023 4.9E-09 75.8 14.9 117 342-504 69-188 (493)
222 TIGR00901 2A0125 AmpG-related 97.9 0.00033 7.1E-09 71.6 15.5 99 401-507 82-180 (356)
223 PRK11462 putative transporter; 97.9 9.1E-05 2E-09 78.8 11.6 125 6-153 265-390 (460)
224 PTZ00207 hypothetical protein; 97.8 0.00042 9E-09 75.2 15.8 123 341-506 84-206 (591)
225 KOG2504 Monocarboxylate transp 97.8 4.3E-05 9.3E-10 81.8 8.2 144 1-175 330-476 (509)
226 TIGR00806 rfc RFC reduced fola 97.8 0.00091 2E-08 69.9 17.5 82 356-462 93-174 (511)
227 KOG2533 Permease of the major 97.8 0.00018 4E-09 76.4 12.2 100 401-510 133-232 (495)
228 TIGR00805 oat sodium-independe 97.8 0.00018 4E-09 79.4 12.2 64 401-464 171-234 (633)
229 KOG4686 Predicted sugar transp 97.8 0.00014 3E-09 69.8 9.1 131 1-164 297-431 (459)
230 KOG2532 Permease of the major 97.7 0.00043 9.2E-09 73.3 13.8 124 339-506 94-217 (466)
231 PF06813 Nodulin-like: Nodulin 97.6 0.001 2.2E-08 64.2 13.2 145 1-172 34-179 (250)
232 COG2211 MelB Na+/melibiose sym 97.6 0.0015 3.3E-08 68.3 15.4 124 6-152 274-398 (467)
233 KOG0569 Permease of the major 97.6 0.0012 2.6E-08 69.6 14.7 154 2-178 303-457 (485)
234 KOG4332 Predicted sugar transp 97.6 0.00085 1.9E-08 64.0 12.0 127 17-170 85-215 (454)
235 PF01770 Folate_carrier: Reduc 97.6 0.012 2.6E-07 60.6 21.0 123 16-170 53-177 (412)
236 PF01306 LacY_symp: LacY proto 97.6 0.00036 7.8E-09 72.0 10.0 137 7-174 262-399 (412)
237 COG2807 CynX Cyanate permease 97.5 0.00071 1.5E-08 67.5 10.8 139 1-169 240-379 (395)
238 PF03825 Nuc_H_symport: Nucleo 97.5 0.001 2.2E-08 69.3 12.2 130 18-173 257-393 (400)
239 KOG2325 Predicted transporter/ 97.4 0.0035 7.5E-08 65.8 15.1 163 317-512 74-236 (488)
240 KOG0253 Synaptic vesicle trans 97.4 0.0011 2.3E-08 66.3 9.6 96 18-144 395-490 (528)
241 TIGR00788 fbt folate/biopterin 97.4 0.00065 1.4E-08 72.4 8.9 130 2-152 286-415 (468)
242 KOG2615 Permease of the major 97.3 0.00082 1.8E-08 67.4 8.1 112 316-463 70-181 (451)
243 PF06609 TRI12: Fungal trichot 97.3 0.011 2.4E-07 64.0 17.3 136 318-505 82-217 (599)
244 PF03209 PUCC: PUCC protein; 97.2 0.0063 1.4E-07 62.1 13.0 145 1-172 241-395 (403)
245 KOG0255 Synaptic vesicle trans 97.2 0.0028 6E-08 68.6 11.3 127 320-500 124-250 (521)
246 TIGR00926 2A1704 Peptide:H+ sy 96.9 0.079 1.7E-06 58.7 20.1 313 5-383 21-343 (654)
247 KOG0254 Predicted transporter 96.9 0.011 2.4E-07 63.8 13.2 110 317-462 92-201 (513)
248 PF06963 FPN1: Ferroportin1 (F 96.9 0.63 1.4E-05 48.8 25.4 152 10-170 40-195 (432)
249 COG0738 FucP Fucose permease [ 96.9 0.037 7.9E-07 56.4 15.3 87 356-463 79-165 (422)
250 TIGR00769 AAA ADP/ATP carrier 96.7 0.93 2E-05 48.1 25.2 133 4-148 43-189 (472)
251 PF05978 UNC-93: Ion channel r 96.7 0.014 3.1E-07 52.0 9.6 103 11-145 44-146 (156)
252 KOG3574 Acetyl-CoA transporter 96.5 0.36 7.8E-06 48.9 19.2 109 404-512 371-495 (510)
253 COG3104 PTR2 Dipeptide/tripept 96.4 0.0058 1.3E-07 63.7 6.4 122 353-512 90-213 (498)
254 PF06813 Nodulin-like: Nodulin 96.2 0.14 3.1E-06 49.4 14.1 93 353-463 64-156 (250)
255 PF00083 Sugar_tr: Sugar (and 96.1 0.00037 7.9E-09 73.7 -4.5 141 15-177 297-438 (451)
256 PF12832 MFS_1_like: MFS_1 lik 96.1 0.014 3E-07 45.4 5.5 44 1-45 32-75 (77)
257 KOG3762 Predicted transporter 96.1 0.0052 1.1E-07 64.4 3.9 129 18-177 420-549 (618)
258 KOG0637 Sucrose transporter an 96.0 0.024 5.2E-07 58.5 8.3 124 17-156 80-207 (498)
259 PF03137 OATP: Organic Anion T 95.8 0.0018 3.9E-08 70.0 -0.9 64 401-464 140-203 (539)
260 KOG3626 Organic anion transpor 95.8 0.092 2E-06 57.8 12.1 109 401-509 236-347 (735)
261 KOG0252 Inorganic phosphate tr 95.8 0.012 2.6E-07 60.6 4.8 151 320-504 90-241 (538)
262 PF06779 DUF1228: Protein of u 95.4 0.083 1.8E-06 41.7 7.2 55 1-56 24-78 (85)
263 PF00854 PTR2: POT family; In 95.3 0.12 2.6E-06 53.2 10.6 125 356-511 2-129 (372)
264 KOG2816 Predicted transporter 95.3 0.34 7.3E-06 51.4 13.7 81 416-512 126-206 (463)
265 PF03092 BT1: BT1 family; Int 94.8 0.33 7E-06 51.3 12.3 90 401-507 85-177 (433)
266 KOG2563 Permease of the major 94.4 0.63 1.4E-05 48.3 12.5 94 354-465 108-203 (480)
267 PRK03612 spermidine synthase; 94.3 0.47 1E-05 51.2 12.1 144 4-174 50-197 (521)
268 PF05978 UNC-93: Ion channel r 92.7 1.4 3.1E-05 39.2 10.5 61 401-461 88-148 (156)
269 TIGR00769 AAA ADP/ATP carrier 92.2 12 0.00026 39.8 18.4 62 402-463 128-190 (472)
270 KOG0637 Sucrose transporter an 92.0 1.6 3.4E-05 45.6 10.9 129 318-459 71-200 (498)
271 PF07672 MFS_Mycoplasma: Mycop 90.6 6.4 0.00014 38.0 13.0 56 123-178 5-65 (267)
272 PF13000 Acatn: Acetyl-coenzym 90.3 4 8.6E-05 43.2 12.1 46 418-463 134-179 (544)
273 PF06963 FPN1: Ferroportin1 (F 89.4 15 0.00032 38.7 15.8 60 425-500 134-195 (432)
274 KOG3098 Uncharacterized conser 88.9 3 6.4E-05 44.0 10.1 125 9-147 280-411 (461)
275 PF05631 DUF791: Protein of un 87.5 35 0.00077 34.7 16.9 64 401-464 120-189 (354)
276 PF03219 TLC: TLC ATP/ADP tran 85.7 55 0.0012 35.1 19.0 134 5-149 59-205 (491)
277 COG0477 ProP Permeases of the 81.4 21 0.00045 33.9 11.8 63 401-463 93-157 (338)
278 COG5336 Uncharacterized protei 80.0 13 0.00027 30.5 7.6 39 429-467 33-71 (116)
279 KOG3880 Predicted small molecu 77.7 81 0.0018 31.6 15.2 107 19-162 77-186 (409)
280 PF03219 TLC: TLC ATP/ADP tran 75.6 1.2E+02 0.0026 32.5 18.2 60 404-463 145-205 (491)
281 TIGR00939 2a57 Equilibrative N 73.0 80 0.0017 33.3 13.8 36 401-437 105-140 (437)
282 PF01770 Folate_carrier: Reduc 70.5 1.4E+02 0.003 31.2 14.5 63 400-463 92-154 (412)
283 COG3202 ATP/ADP translocase [E 64.1 2.1E+02 0.0045 30.6 15.3 62 402-463 147-209 (509)
284 TIGR00939 2a57 Equilibrative N 64.0 2E+02 0.0043 30.4 29.7 58 401-458 371-428 (437)
285 KOG1479 Nucleoside transporter 56.4 2.5E+02 0.0055 29.2 19.4 58 400-457 341-398 (406)
286 KOG3574 Acetyl-CoA transporter 56.0 48 0.001 34.2 7.6 52 410-461 141-192 (510)
287 PF02487 CLN3: CLN3 protein; 54.3 1.2E+02 0.0026 31.6 10.5 77 356-461 90-166 (402)
288 TIGR01667 YCCS_YHJK integral m 50.9 1.1E+02 0.0024 34.5 10.4 49 29-100 51-99 (701)
289 KOG1237 H+/oligopeptide sympor 49.9 1E+02 0.0022 33.9 9.7 141 352-509 101-249 (571)
290 PF09527 ATPase_gene1: Putativ 48.6 79 0.0017 22.4 5.9 35 14-48 10-44 (55)
291 COG5336 Uncharacterized protei 43.5 69 0.0015 26.4 5.3 31 15-45 53-83 (116)
292 TIGR01666 YCCS hypothetical me 43.3 1.8E+02 0.0039 32.8 10.6 57 22-101 41-100 (704)
293 PRK03612 spermidine synthase; 40.8 4.5E+02 0.0097 28.5 12.9 51 411-462 119-169 (521)
294 PF07857 DUF1632: CEO family ( 40.8 1E+02 0.0022 29.9 7.1 28 433-460 74-101 (254)
295 PF06645 SPC12: Microsomal sig 39.4 44 0.00095 25.7 3.6 50 127-179 11-60 (76)
296 PF06912 DUF1275: Protein of u 37.8 3.3E+02 0.0072 25.1 11.5 41 126-167 164-204 (209)
297 TIGR02230 ATPase_gene1 F0F1-AT 34.0 1.7E+02 0.0036 23.9 6.2 36 10-45 48-83 (100)
298 KOG3810 Micronutrient transpor 32.3 5.8E+02 0.013 26.3 14.0 99 19-149 57-155 (433)
299 PF11151 DUF2929: Protein of u 30.3 2.1E+02 0.0046 20.6 5.7 44 126-169 4-47 (57)
300 TIGR02230 ATPase_gene1 F0F1-AT 27.9 1.6E+02 0.0035 24.0 5.2 33 126-158 45-77 (100)
301 COG3619 Predicted membrane pro 27.7 5.4E+02 0.012 24.5 11.0 38 127-165 171-208 (226)
302 PF10777 YlaC: Inner membrane 26.6 2.1E+02 0.0046 25.0 6.0 39 144-182 52-90 (155)
303 PF12273 RCR: Chitin synthesis 26.2 37 0.00081 29.1 1.4 18 154-171 1-18 (130)
304 PF13000 Acatn: Acetyl-coenzym 25.0 9E+02 0.02 26.2 24.8 63 404-466 407-469 (544)
305 PF12805 FUSC-like: FUSC-like 24.9 4.7E+02 0.01 25.5 9.2 42 156-201 77-118 (284)
306 KOG3097 Predicted membrane pro 23.3 2.2E+02 0.0047 28.9 6.2 67 18-110 72-138 (390)
307 COG4262 Predicted spermidine s 22.0 6.7E+02 0.014 25.9 9.2 113 4-141 43-160 (508)
308 PF02632 BioY: BioY family; I 21.4 1.9E+02 0.0042 25.4 5.0 40 11-51 60-99 (148)
309 KOG4112 Signal peptidase subun 20.8 1.8E+02 0.0038 23.3 4.0 50 128-180 27-76 (101)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-43 Score=375.10 Aligned_cols=495 Identities=43% Similarity=0.753 Sum_probs=437.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC-CCCCCCCCCchh
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQ-DSGACPGPTPWQ 81 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (532)
..++.-.++.|.......++.+++++|.|+||.+++.++..++.+|..+..+++.++.++++.|..+ ...-|..+....
T Consensus 72 ~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q 151 (571)
T KOG1237|consen 72 GGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQ 151 (571)
T ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHH
Confidence 4567788999999999999999999999999999999999999999999999999999998776222 223578878888
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...++.+.-+.++|.|...|+..++.+|+|+..++.++..+...++++|+..++|..++-.+-.++.++.||.+.|.++.
T Consensus 152 ~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~ 231 (571)
T KOG1237|consen 152 LAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPT 231 (571)
T ss_pred HHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHH
Confidence 99999999999999999999999999999996666667777899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcc
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAI 241 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (532)
+.+.+++++++...+.|+..+|.+++...+.+++..+.+++..+.+.+++.. ...........++++++++|++.+
T Consensus 232 ~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~~----~~~~~~~~~~~~t~~f~~l~kaa~ 307 (571)
T KOG1237|consen 232 VLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAVVSLDPEEL----YYDCTDSVAIEGTKPFRFLDKAAL 307 (571)
T ss_pred HHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhccCCCcchhc----cccccccccccCCcccchhhHhhc
Confidence 9999999999999999999999999999999999999999887776554333 111111122334778999999998
Q ss_pred cCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhhh
Q 009538 242 MTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYAI 321 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
+.+++. +.+...++|+.|+.++++|.|.+++.++.+...++++..+.|+.+....|+..++++.+ .++++|++.++.
T Consensus 308 ~~~~~~--~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~-~~f~ip~asl~~ 384 (571)
T KOG1237|consen 308 KTSDDL--KDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLG-SNFKIPAASLQV 384 (571)
T ss_pred cCCccc--ccccccCCccCCCceehhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCC-CCeEeCchhHHH
Confidence 876554 44556789999999999999999999999999999999999999999999999999997 239999999999
Q ss_pred hhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccch
Q 009538 322 FSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLS 401 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (532)
+..+.+++..|+.|++..|+.+|+++++...+.+.++-+|+++..+++...+..+.++.+.+..+. ...+++|
T Consensus 385 f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~~-------~~~~~mS 457 (571)
T KOG1237|consen 385 FILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSLL-------VETNPMS 457 (571)
T ss_pred HHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhcc-------CCCCCee
Confidence 999999999999999999999999887666889999999999999999999999999988765411 1146799
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCC-CCCcc
Q 009538 402 GLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLP-EDLNK 480 (532)
Q Consensus 402 ~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 480 (532)
.+|++++|+++|++|++...+..++.++.+|++||+.+++++.+..++|+.++.++.......++. .++|+. +++|.
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~ 535 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNK 535 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhh
Confidence 999999999999999999999999999999999999999999999999999999999988765533 458999 99999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLCAKWYKYKGS 513 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~ 513 (532)
++.+++||+++....++...+..+.++++.+..
T Consensus 536 ~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~ 568 (571)
T KOG1237|consen 536 GRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDD 568 (571)
T ss_pred hHHHHHHHHHHHHHhhhhhheEEEEEeeeeccc
Confidence 999999999999999999999888887776643
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-36 Score=305.93 Aligned_cols=425 Identities=18% Similarity=0.273 Sum_probs=314.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|++++..+.++|....++.+++|||+|||++|+||++..+.+++.+|+++++.++. .
T Consensus 58 ~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~----------------------~ 115 (498)
T COG3104 58 FDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSV----------------------S 115 (498)
T ss_pred cChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccc----------------------c
Confidence 478899999999999999999999999999999999999999999999999998740 1
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+...++++..+.++|.|.++|++.++++|++|+.|+|++ ..++++|+++|+|++++|++++++.+..||+..|.+.
T Consensus 116 ~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD----~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~a 191 (498)
T COG3104 116 GPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD----GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLA 191 (498)
T ss_pred cccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC----CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 345799999999999999999999999999999888754 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcceeeecC--CCCCchh------hHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCc
Q 009538 161 AFMMFLSCAMFFLGSRLYAKVK--PEGSPLA------STVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQ 232 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (532)
++.+.++++.++++++++.... ++..+.. .....+.....-...... + . +.
T Consensus 192 avGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~----------~----------~~ 250 (498)
T COG3104 192 AVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLL-N----------Q----------NT 250 (498)
T ss_pred HHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHH-H----------H----------HH
Confidence 9999999999988887665433 1111111 001100000000000000 0 0 00
Q ss_pred ccchhh-hcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhh-hccCcccCCc
Q 009538 233 FRCLDK-AAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQA-LQSDRRVGNT 310 (532)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 310 (532)
.+..-. ..+....... .+...| .+.. +|+||++..+++++...+||+.+.|+.+.+..++ ...+++..
T Consensus 251 ~~~~~~~~~i~~~~~~~----~~~~~~---~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-- 320 (498)
T COG3104 251 FSGVLLVISILIAIIYF----AEAFRS---PKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-- 320 (498)
T ss_pred HHHHHHHHHHHHHHHHH----HHHhcc---CccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc--
Confidence 000000 0000000000 000000 1112 6789999999999999999999999999555554 44455533
Q ss_pred cceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcc
Q 009538 311 HFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGL 390 (532)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (532)
++.+++++++++|++.++++.|+.+++..|+.++ .++++...++..|+++++.+++.+........
T Consensus 321 g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~----~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~---------- 386 (498)
T COG3104 321 GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRG----NKQPSTPIKFALGLILAGLGFLILLLAGIWFG---------- 386 (498)
T ss_pred ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcC----CCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc----------
Confidence 6889999999999999999999999985555544 33477888999999999999988776633211
Q ss_pred cccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 009538 391 EQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGAST 470 (532)
Q Consensus 391 ~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~ 470 (532)
++.+..|.+|++..|+++++||.+..|...+++++.+|+++++.++|++.+.+..++.++..+.+...+ +
T Consensus 387 ----~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~----- 456 (498)
T COG3104 387 ----GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-T----- 456 (498)
T ss_pred ----CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-c-----
Confidence 113568999999999999999999999999999999999999999999999999999999888774221 0
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009538 471 GDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKY 510 (532)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~ 510 (532)
++. .+......+|+.++...++..+......|+.++
T Consensus 457 ~~~----~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r 492 (498)
T COG3104 457 DPA----YTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNR 492 (498)
T ss_pred chh----hhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 000 111234567888887777777766666665543
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1e-33 Score=301.12 Aligned_cols=429 Identities=13% Similarity=0.199 Sum_probs=296.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++++++|+.+.|....++.++++|+++||++||||+++++.+++++|+++++++.+.
T Consensus 47 ~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~---------------------- 104 (489)
T PRK10207 47 FSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLK---------------------- 104 (489)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccc----------------------
Confidence 3577889999999999999999999999994499999999999999999999997531
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
...++++|.++|+|.|+..|+..++++|+||++++| |.+.++++|++.|+|.++||.+++++.+++|||+.|++.
T Consensus 105 -~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~ 179 (489)
T PRK10207 105 -PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC 179 (489)
T ss_pred -hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHH
Confidence 224668999999999999999999999999865422 245799999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhcceeeec--CCCCCchh--hHHHHHH------HHHHhcccCCCCCCcccccccCCcccccCCCCCC
Q 009538 161 AFMMFLSCAMFFLGSRLYAKV--KPEGSPLA--STVQVFV------AAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHT 230 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (532)
++.++++++.++..++.+++. +|++++.+ ....... ........ ...........
T Consensus 180 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------- 244 (489)
T PRK10207 180 GAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMH-NVEVANLVLIV-------------- 244 (489)
T ss_pred HHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHH--------------
Confidence 776666666666555444332 22222221 1110000 00000000 00000000000
Q ss_pred CcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhh-ccCcccCC
Q 009538 231 GQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQAL-QSDRRVGN 309 (532)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 309 (532)
........+... + .+.+..++++.+..+.+++...++|..+.|..+.+..+.. ..+....
T Consensus 245 --~~~i~~~~f~~~-----~-----------~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~- 305 (489)
T PRK10207 245 --LSIVVTIIFFRE-----A-----------FKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL- 305 (489)
T ss_pred --HHHHHHHHHHHH-----H-----------hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc-
Confidence 000000000000 0 0001123455666666677788899998888664433333 4455444
Q ss_pred ccceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc
Q 009538 310 THFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVG 389 (532)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (532)
++.++++.++++|++.+++..|+.+++ .+|+++|+.++++..++.+|+++.+++++.+....... ...
T Consensus 306 -G~~i~~~~~~~~n~~~iii~~pl~~~l----~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~---- 373 (489)
T PRK10207 306 -GFSINPVSFQALNPFWVVVASPILAGI----YTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWF---ADA---- 373 (489)
T ss_pred -ceEECHHHHHhHhHHHHHHHHHHHHHH----HHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhh---cCC----
Confidence 677889999999999999999997665 77877776567888899999999998887654332100 000
Q ss_pred ccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 009538 390 LEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGAS 469 (532)
Q Consensus 390 ~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~ 469 (532)
....+.||+++.+++.++||++..+..++++++.+|++++|.++|++++.+.+|+.++..+........ ..
T Consensus 374 -------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~--~~ 444 (489)
T PRK10207 374 -------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPD--NI 444 (489)
T ss_pred -------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cc
Confidence 123678999999999999999999999999999999999999999999999999999998887653110 00
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009538 470 TGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKGSGD 515 (532)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~ 515 (532)
.++. .....+.++|..+++.+++..+.+++..|+.++...++
T Consensus 445 ~~~~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 486 (489)
T PRK10207 445 TDPL----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRMINTP 486 (489)
T ss_pred ccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0010 01123677888888888877777777777666554333
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2e-32 Score=290.97 Aligned_cols=416 Identities=16% Similarity=0.218 Sum_probs=294.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++..+++++.+.|.++..++++++|+++||++||||+++++.++++++.+++++++
T Consensus 45 ~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~------------------------ 100 (475)
T TIGR00924 45 FSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI------------------------ 100 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc------------------------
Confidence 36788999999999999999999999999944999999999999999999999874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+...++++|++.|+|.|+..|+..++++|++++++++ +|++.++++|+..|+|.++||.+++++.++.||++.|++.
T Consensus 101 ~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~ 177 (475)
T TIGR00924 101 YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLA 177 (475)
T ss_pred cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 3557888999999999999999999999999865422 2356899999999999999999999999989999999998
Q ss_pred HHHHHHHHHHHHhhcceeeecCCCCCchhh-----HHHH------HHHHHHhcccCCCCCCcccccccCCcccccCCCCC
Q 009538 161 AFMMFLSCAMFFLGSRLYAKVKPEGSPLAS-----TVQV------FVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPH 229 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (532)
++.++++.+.++..++.+++.++++++..+ ..+. +....+.... ..+... .+ ....
T Consensus 178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~-~~~~ 244 (475)
T TIGR00924 178 AVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWL-MHHVVI-----------AN-ILLM 244 (475)
T ss_pred HHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHH-HhccHH-----------HH-HHHH
Confidence 877777766666655554332222211110 0000 0000000000 000000 00 0000
Q ss_pred CCcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchh-hhhhhhccCcccC
Q 009538 230 TGQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTY-VVFQALQSDRRVG 308 (532)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 308 (532)
......+...++...+ + ..+..++++....+++++....+|+.+.|..+. ..++...++...+
T Consensus 245 -----~~~~~~~~~~~~~~~~------~-----~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~ 308 (475)
T TIGR00924 245 -----TVTLAVIIFFFRLAFK------P-----RLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML 308 (475)
T ss_pred -----HHHHHHHHHHHHHHHh------c-----cCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc
Confidence 0000000000000000 0 001122344455778888889999999998884 4555565677665
Q ss_pred CccceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Q 009538 309 NTHFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPV 388 (532)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (532)
++++|++.++++|++.+++..|+++++ ..++.||...++...++.+|+++.+++++..++... ....
T Consensus 309 --~~~ip~~~~~~~n~~~iil~~p~~~~~----~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~----~~~~--- 375 (475)
T TIGR00924 309 --GMSVPVIWFQSLNPFWVVVGSPVLAMI----WTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIW----FADA--- 375 (475)
T ss_pred --ceEECHHHHHhhhHHHHHHHHHHHHHH----HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHh----hcCC---
Confidence 788999999999999999999997765 555555533456677889999999999888776521 1110
Q ss_pred cccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Q 009538 389 GLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGA 468 (532)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~ 468 (532)
..+.+.||+++.+++.++||.+..|..++++++.+|++.||+++|++.+...+|+.+++.+.....+..
T Consensus 376 --------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~--- 444 (475)
T TIGR00924 376 --------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ--- 444 (475)
T ss_pred --------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence 135789999999999999999999999999999999999999999999999999999999887765421
Q ss_pred CCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009538 469 STGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYK 509 (532)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~ 509 (532)
+...+|...+++.++..+.+++..|..+
T Consensus 445 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 445 -------------GVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred -------------chhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345666667666666666666655544
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=3.8e-32 Score=285.46 Aligned_cols=413 Identities=15% Similarity=0.195 Sum_probs=288.1
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+++.+.+.|....+++++++|+++||++||||+++++.++..+|+++++....
T Consensus 42 ls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~----------------------- 98 (493)
T PRK15462 42 YDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI----------------------- 98 (493)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc-----------------------
Confidence 367889999999999999999999999999559999999999999999988775421
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+...++++..+.++|.|...|+..++++|+||+++++ |.+.++++|...|+|+.++|.+++++.+..||++.|.+.
T Consensus 99 ~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~ia 174 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLA 174 (493)
T ss_pred chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHH
Confidence 1123555666777888999999999999999865433 245899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhcceeeecC---CCCCchhhHHHH------HHH----HHHhcccCCCCCCcccccccCCcccccCCC
Q 009538 161 AFMMFLSCAMFFLGSRLYAKVK---PEGSPLASTVQV------FVA----AIKKRHLKLPEEPWLTLHNHIPKNCINSKL 227 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (532)
++.++++++.++..++++.+.. |+..+.++.... +.. .......... ......... .
T Consensus 175 aigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~-- 244 (493)
T PRK15462 175 AVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKE-WSVYALIVA-------T-- 244 (493)
T ss_pred HHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-------H--
Confidence 8877777777666655543321 111110110000 000 0000000000 000000000 0
Q ss_pred CCCCcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccch-hhhhhhhccCcc
Q 009538 228 PHTGQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQT-YVVFQALQSDRR 306 (532)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 306 (532)
....-++-. +.. ...+.+|+|++..++++++...+||..+.|.++ ..++...+.|++
T Consensus 245 --~~~~~~~~~--~~~------------------~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~ 302 (493)
T PRK15462 245 --IIGLGVLAK--IYR------------------KAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRD 302 (493)
T ss_pred --HHHHHHHHH--HHH------------------hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccch
Confidence 000000000 000 001225688888899999999999999999999 556666778888
Q ss_pred cCCccceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 009538 307 VGNTHFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSR 386 (532)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (532)
+. ++++|+..++++|++.+++.+|++.++ ..|+.+|+++++...|+..|+++++++++.+.+.... ..
T Consensus 303 ~~--g~~ip~~~~qslNp~~ii~l~P~~a~l----w~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~~-- 370 (493)
T PRK15462 303 MF--GYTVPTAMFQSINAFAVMLCGVFLAWV----VKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARW----SA-- 370 (493)
T ss_pred hc--ceeeCHHHHHhHhHHHHHHHHHHHHHH----HHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh----cC--
Confidence 87 899999999999999999999998776 5665444445677889999999999999887765321 00
Q ss_pred CCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHH-HHHHHHHHHHHHHhcccc
Q 009538 387 PVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGF-AISNYLNGFLISMVHRFT 465 (532)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~-~ig~~l~~~~~~~~~~~~ 465 (532)
.....+.+|++..++++++||.+..|...+++++.+|++.+|++||++.+.. .+|+.+++.+........
T Consensus 371 ---------~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~ 441 (493)
T PRK15462 371 ---------MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQAS 441 (493)
T ss_pred ---------CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 0124789999999999999999999999999999999999999999998854 788888888777653210
Q ss_pred cCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 009538 466 KGASTGDWLPEDLNKGRLDYFYYLVAALGLLN 497 (532)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~ 497 (532)
.++.-....+...+..+|..++.+.++.
T Consensus 442 ----~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 442 ----FDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred ----CCccccccchhhhHHHHHHHHHHHHHHH
Confidence 0000000001124666777777666555
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1.7e-31 Score=285.51 Aligned_cols=425 Identities=15% Similarity=0.236 Sum_probs=295.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++++++++.+.|....+..++++|+++||++|||++++++.+++++++++++++++ +
T Consensus 55 s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~-----------------------~ 111 (500)
T PRK09584 55 SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGH-----------------------D 111 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcc-----------------------c
Confidence 56778899989888888888899999999339999999999999999999988741 3
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...++++|+++|+|.|...|+..++++|+||+++++ +.+.++++|+..|+|.++||.+++++.+++|||+.|++.+
T Consensus 112 ~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~ 187 (500)
T PRK09584 112 AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSV 187 (500)
T ss_pred HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 456788999999999999999999999999754322 2347899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhcceeeec--CCCCCchh--hHHH----HHHHHHHhcc-cCCCCCCcccccccCCcccccCCCCCCCc
Q 009538 162 FMMFLSCAMFFLGSRLYAKV--KPEGSPLA--STVQ----VFVAAIKKRH-LKLPEEPWLTLHNHIPKNCINSKLPHTGQ 232 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~--~~~~~~~~--~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (532)
+.++++.+.++...+.+++. +|++++.+ .... .......... .+.++... ..
T Consensus 188 i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~ 248 (500)
T PRK09584 188 VGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIAR-------------------MA 248 (500)
T ss_pred HHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHH-------------------HH
Confidence 87777666555544443332 12221111 1100 0000000000 00000000 00
Q ss_pred ccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhh-ccCcccCCcc
Q 009538 233 FRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQAL-QSDRRVGNTH 311 (532)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 311 (532)
........... .++...+.+..++++.+..+..++..+.||..+.|+++.+..+.. ..++... +
T Consensus 249 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~--g 313 (500)
T PRK09584 249 LGVVALGIVVI-------------FGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL--G 313 (500)
T ss_pred HHHHHHHHHHH-------------HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcccccc--c
Confidence 00000000000 000000011234566666677778888999999999987665543 3454444 6
Q ss_pred ceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccc
Q 009538 312 FKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLE 391 (532)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (532)
+.++++.++++|++.+++..|+.+++ .+|+.+| .++..++.+|+++.+++++........ ..
T Consensus 314 ~~i~~~~~~s~n~i~iil~~p~~~~~----~~~l~~r---~~~~~~~~~G~~l~~l~f~~l~~~~~~----~~------- 375 (500)
T PRK09584 314 IAVEPEQYQALNPFWIMIGSPILAAI----YNKMGDR---LPMPHKFAIGMVLCSGAFLVLPLGAKF----AN------- 375 (500)
T ss_pred eEECHHHHHHHhHHHHHHHHHHHHHH----HHHhCcC---CCcHHHHHHHHHHHHHHHHHHHHHHHh----cC-------
Confidence 77899999999999999999997775 6676666 567789999999999999887765321 10
Q ss_pred ccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCC
Q 009538 392 QRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTG 471 (532)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~ 471 (532)
....++.+|+++.+++.++||++..|...+++.+.+|+++||+++|++.+...+|+.+++.+...+...
T Consensus 376 ----~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~------- 444 (500)
T PRK09584 376 ----DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVP------- 444 (500)
T ss_pred ----CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 123578889999999999999999999999999999999999999999999999999998887644210
Q ss_pred CCCCCCC-cchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC
Q 009538 472 DWLPEDL-NKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKGSGDG 516 (532)
Q Consensus 472 ~~~~~~~-~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~ 516 (532)
+...+.. ..+++...|..+++++++..+.+++..++.++.+..+.
T Consensus 445 ~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~~~~~~ 490 (500)
T PRK09584 445 DNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRMTQDDS 490 (500)
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0000101 11236778888888777766666666666665544333
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.96 E-value=1.6e-26 Score=250.85 Aligned_cols=317 Identities=28% Similarity=0.531 Sum_probs=254.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++++++..+.+.|....++.+++||+++|+++||+++++++.+++.+|.++.++++..+..+ ..
T Consensus 20 ~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~----------------~~ 83 (654)
T TIGR00926 20 FSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH----------------PL 83 (654)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc----------------ch
Confidence 35778899999999999999999999999999999999999999999999999865322110 12
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-------ccc
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD-------VSW 153 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~-------~gw 153 (532)
+...++++..+.++|.|++.|+..+..+|+|+++++ +++.++++++|+++|+|+++++++.+++.++ .+|
T Consensus 84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~ 160 (654)
T TIGR00926 84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCY 160 (654)
T ss_pred HHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcch
Confidence 345678899999999999999999999999975432 3456799999999999999999999998743 379
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcc
Q 009538 154 AWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQF 233 (532)
Q Consensus 154 ~~~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (532)
++.|.++++.+++++++++..+++++..+|.+++..+..+++..+.+++....+++ ...
T Consensus 161 ~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~---------------------~~~ 219 (654)
T TIGR00926 161 PLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH---------------------WPL 219 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc---------------------cch
Confidence 99999999999999999988888887777777766677777666665543211110 002
Q ss_pred cchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccce
Q 009538 234 RCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFK 313 (532)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (532)
+|++.+... ...++++++|++++++++++...++|..+.|+.+.+..|+..++.+++ +++
T Consensus 220 ~~ld~a~~~------------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~--g~~ 279 (654)
T TIGR00926 220 HWLDYAKDK------------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVG--GFE 279 (654)
T ss_pred hHHHHhccc------------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccC--CEe
Confidence 233322111 012356788999999999999999999999999988888888887776 788
Q ss_pred eChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009538 314 IPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRR 380 (532)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 380 (532)
++++.++.+|++.+++..|++++.++|..+|.+.+ .++..++.+|++++++++++.++.+.++.
T Consensus 280 ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 280 IQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998877777665433 67899999999999999999998887765
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=8.6e-24 Score=226.51 Aligned_cols=368 Identities=15% Similarity=0.114 Sum_probs=221.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+|+.+.|.++..++.+++|+++||+ |||++++++.+++.++++++++++ |
T Consensus 39 s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~~~~~a~------------------------~ 93 (495)
T PRK14995 39 SGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASLAAAFSP------------------------T 93 (495)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHcC------------------------C
Confidence 467889999999999999999999999996 999999999999999999999985 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.++++|+++|+|.+...|.....+.+.++++ ++|+++++++....++|..+||.+++++.+++||||.|++..
T Consensus 94 ~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~-----~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~ 168 (495)
T PRK14995 94 ASWLIATRALLAIGAAMIVPATLAGIRATFTEE-----KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINV 168 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 788999999999999999998888888877542 234668999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchhhHHHH------HHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccc
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQV------FVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRC 235 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (532)
++.++..++.+...|+.+.++.++......... +....+... +...+....... . ....
T Consensus 169 ~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~------~--------~~~~ 233 (495)
T PRK14995 169 PIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTAL-KGFLSLWVTSLT------L--------LTGA 233 (495)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhcc-ccCCchHHHHHH------H--------HHHH
Confidence 776666555444444422111111111110000 000111000 000000000000 0 0000
Q ss_pred hhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhh-hHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCcccee
Q 009538 236 LDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIR-VIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKI 314 (532)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (532)
.-...... .+. +...+..+++.+ ++ |.... .+..+.....+. ......+.+.+.....+. .
T Consensus 234 ~~l~~f~~--~e~-~~~~p~~~~~lf-----~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~lq~v~g~s~--------~ 295 (495)
T PRK14995 234 LLLGLFIR--TQL-AASRPMIDMRLF-----TH-RIILSGVVMAMTAMITLV-GFELLMAQELQFVHGLSP--------L 295 (495)
T ss_pred HHHHHHHH--HHh-cCCCCCcCHHHh-----CC-cccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCH--------H
Confidence 00000000 000 000111111111 11 11111 111111111111 111111111111111110 1
Q ss_pred ChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccC
Q 009538 315 PAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRR 394 (532)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (532)
..+.......++..++.++.+++ .+|+++| +.+..|+++.++++.......
T Consensus 296 ~ag~~~~~~~~~~~~~~~~~g~l----~~r~g~~-------~~~~~g~~~~~~~~~~l~~~~------------------ 346 (495)
T PRK14995 296 EAGMFMLPVMVASGFSGPIAGIL----VSRLGLR-------LVATGGMALSALSFYGLAMTD------------------ 346 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHcCch-------HHHHHHHHHHHHHHHHHHHhc------------------
Confidence 12333444455556666665544 5665544 456677777766665544331
Q ss_pred CccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 395 GAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 395 ~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
...+.+.....+++.|+|.+...+.....+.+.+|++.++.+.+++++.+.+|+.+|+.+.+.+.+.
T Consensus 347 ---~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 347 ---FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred ---CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123444556778889999998888899999999999999999999999999999999999998654
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=1.8e-23 Score=217.17 Aligned_cols=340 Identities=13% Similarity=0.053 Sum_probs=222.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.|.+++.+++++.|+++||+ ||||++..+..++.++++++++++
T Consensus 41 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 95 (390)
T PRK03545 41 MQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIASHVLSALAW------------------------ 95 (390)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3678899999999999999999999999996 999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.++++|+++|++.+...|...+++.|++|++ +|+++++++....++|.++||.+++.+.++.|||+.|++.
T Consensus 96 ~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~ 169 (390)
T PRK03545 96 NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAG------KKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAI 169 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh------hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHH
Confidence 5788999999999999999999999999998742 2345899999999999999999999999989999999998
Q ss_pred HHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhc
Q 009538 161 AFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAA 240 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (532)
++..++..+..+...|+.++ +++++..+ ..
T Consensus 170 ~~~~~l~~~~~~~~~~~~~~--~~~~~~~~----~~-------------------------------------------- 199 (390)
T PRK03545 170 GGGALITLLLLIKLLPLLPS--EHSGSLKS----LP-------------------------------------------- 199 (390)
T ss_pred HHHHHHHHHHHHHhCCCCCC--CCcchHHH----HH--------------------------------------------
Confidence 87665554443333332110 00000000 00
Q ss_pred ccCCcccccCCCCCCCCCccchhhhhhhhhhhhh-hHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhh
Q 009538 241 IMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIR-VIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASY 319 (532)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
+..++ +.... ....++.....+......+.+.. .....+.. ..+..
T Consensus 200 -----------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~s~~--------~~~~~ 246 (390)
T PRK03545 200 -----------------------LLFRR-PALVSLYLLTVVVVTAHFTAYSYIEPFVQ-QVAGLSEN--------FATLL 246 (390)
T ss_pred -----------------------HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCcc--------HHHHH
Confidence 00001 11111 11111111111111111111111 11111111 11222
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
.....++.+++..+.+++ .+|.++ +.+..+..+..++....... .
T Consensus 247 ~~~~~~~~~~g~~~~g~l----~dr~~~--------~~~~~~~~~~~~~~~~l~~~-----------------------~ 291 (390)
T PRK03545 247 LLLFGGAGIIGSVLFSRL----GNRHPS--------GFLLIAIALLLVCLLLLLPA-----------------------A 291 (390)
T ss_pred HHHHHHHHHHHHHHHHHH----hhccch--------hHHHHHHHHHHHHHHHHHHH-----------------------h
Confidence 333344445555554433 444322 23445555554544333222 1
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCc
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLN 479 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (532)
.+.+.++...++.|++.....+.....+.+..|+ .|++++|+++....+|..+++.+.|.+.|..
T Consensus 292 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-------------- 356 (390)
T PRK03545 292 NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-ATDVAMALFSGIFNIGIGAGALLGNQVSLHL-------------- 356 (390)
T ss_pred chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------
Confidence 2445556677778888877777778888888885 6899999999999999999999999998754
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhh
Q 009538 480 KGRLDYFYYLVAALGLLNFGFFLLCAK 506 (532)
Q Consensus 480 ~~~~~~~~~~~~~~~vv~~~~~~~~~~ 506 (532)
++...|+..+.+.+++.+..+...+
T Consensus 357 --g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 357 --GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred --ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 3556777777888887777666543
No 10
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=2.8e-23 Score=223.05 Aligned_cols=142 Identities=18% Similarity=0.173 Sum_probs=116.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
+.+.+++.+.+.++..++++++|+++||+ |||+++.++++++.+++++++++.+.. ...++
T Consensus 55 ~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~~------------------~~~~~ 115 (502)
T TIGR00887 55 SSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGSS------------------PKSVM 115 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCcc------------------cchHH
Confidence 44668999999999999999999999996 999999999999999999998874200 01236
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-------------
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS------------- 149 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~------------- 149 (532)
..++++|+++|++.|...|..+.+++|++|+ +.|++..++.+....+|.++|+.++.++..
T Consensus 116 ~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~------~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 189 (502)
T TIGR00887 116 ATLCFWRFWLGVGIGGDYPLSAIITSEFATK------KWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEA 189 (502)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 7899999999999999999999999999885 234568999999999999999888765421
Q ss_pred ----------cccchhhhHHHHHHHHHHHH
Q 009538 150 ----------DVSWAWGLGIPAFMMFLSCA 169 (532)
Q Consensus 150 ----------~~gw~~~F~v~~~~~~l~~~ 169 (532)
.++||++|.+.++..++..+
T Consensus 190 ~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 190 SCTGSCVPAVDYMWRILIGFGAVPALLALY 219 (502)
T ss_pred cccccccchhcccHHHHHHHHHHHHHHHHH
Confidence 25899999988776555444
No 11
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=1.9e-23 Score=222.97 Aligned_cols=149 Identities=14% Similarity=0.111 Sum_probs=119.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC-CCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPG-PTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~ 80 (532)
++.+.+++.+++.++..++++++|+++||+ ||||+++++.++++++.++++++...- .++. ++..
T Consensus 53 ~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~-------------~~~~~~~~~ 118 (479)
T PRK10077 53 ANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGF-------------TSIGPDNTG 118 (479)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhcccc-------------ccccccchh
Confidence 457889999999999999999999999996 999999999999999999888752100 0000 1123
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc--------cccc
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ--------SDVS 152 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~--------~~~g 152 (532)
++..++++|+++|++.|+..|...++++|++|++ +|++.++.+..+..+|.++++.+++.+. +++|
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 192 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH------IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG 192 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC
Confidence 4678899999999999999999999999998752 2355899999999999999988766543 4579
Q ss_pred chhhhHHHHHHHHHHHHH
Q 009538 153 WAWGLGIPAFMMFLSCAM 170 (532)
Q Consensus 153 w~~~F~v~~~~~~l~~~~ 170 (532)
||+.|++.++..++..+.
T Consensus 193 Wr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 193 WRYMFASEAIPALLFLML 210 (479)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999999987766655443
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=4.9e-23 Score=214.25 Aligned_cols=345 Identities=11% Similarity=0.023 Sum_probs=218.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.|.+++.+++++.|+++||+ |||+++..+..+++++.+++++++
T Consensus 41 ~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~------------------------ 95 (393)
T PRK09705 41 MSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP------------------------ 95 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc------------------------
Confidence 4678999999999999999999999999996 999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc-cchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-SWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~-gw~~~F~v 159 (532)
++..++++|+++|+|.|...+....++.|+++ + + |+.+++.+..+.++|..+|+.+++++.++. +||+.+.+
T Consensus 96 ~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~-~-----~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~ 168 (393)
T PRK09705 96 QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q-R-----TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAW 168 (393)
T ss_pred chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-c-c-----chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 56789999999999999999999999999875 2 1 245899999999999999999999988775 89998876
Q ss_pred HHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhh
Q 009538 160 PAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKA 239 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (532)
.++..++.+..++...++ +|+.++ .++ . +
T Consensus 169 ~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~~~-------------~--------~----- 197 (393)
T PRK09705 169 WALPAVVALFAWWWQSAR----EVASSH---------------------KTT-------------T--------T----- 197 (393)
T ss_pred HHHHHHHHHHHHHHHhcC----CCcccc---------------------CCC-------------c--------C-----
Confidence 555443333322222111 111000 000 0 0
Q ss_pred cccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhh
Q 009538 240 AIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASY 319 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
.. +...+.+.....+...+....++....+.+.++. + ...+.. ..+..
T Consensus 198 -----------------~~-----~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~-~-~g~s~~--------~ag~~ 245 (393)
T PRK09705 198 -----------------PV-----RVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYI-E-IGASAQ--------YSGSL 245 (393)
T ss_pred -----------------Cc-----ccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-cCCChh--------hhhHH
Confidence 00 0000011111111111222222222222333221 1 111111 12233
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
.....++.+++.++.+++ .+|.++| +.+..++.+..++........
T Consensus 246 ~~~~~i~~i~g~~~~g~l----~~r~~~~-------~~~~~~~~l~~~~~~~~~~~~----------------------- 291 (393)
T PRK09705 246 LALMTLGQAAGALLMPAM----ARHQDRR-------KLLMLALVLQLVGFCGFIWLP----------------------- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHH----Hhhccch-------HHHHHHHHHHHHHHHHHHHcc-----------------------
Confidence 344445555555554443 4544333 455666666666655443321
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCC
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQF-PENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDL 478 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~-P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (532)
.+.... ..++.+++.+...+.......+.. |++.+|+..|+.+....++..+++.+.+++.|..+
T Consensus 292 ~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g------------ 357 (393)
T PRK09705 292 LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG------------ 357 (393)
T ss_pred chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------
Confidence 111111 123456666666666666667776 46789999999999999999999999999988642
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009538 479 NKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYK 511 (532)
Q Consensus 479 ~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~ 511 (532)
++...|...++++++..+......+|++.+
T Consensus 358 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 358 ---NYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 234566666677777666666666665544
No 13
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=8.7e-23 Score=210.03 Aligned_cols=145 Identities=10% Similarity=-0.023 Sum_probs=113.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.++|.+++.++++++|+++||+ |||++++.+......+.+ +..+. +
T Consensus 23 ~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~-----------------------~ 77 (368)
T TIGR00903 23 VSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP-----------------------F 77 (368)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh-----------------------c
Confidence 3678899999999999999999999999996 999987766655555443 33331 2
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
++..++++|+++|+|.|.. +.....++|++|+ ++|++++++.+.+.++|.++++.+++++.+++|||+.|++.
T Consensus 78 ~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~------~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~ 150 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFL-LNAFAPAASQIRE------ERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPI 150 (368)
T ss_pred cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 5788999999999999964 4566667898874 23467899999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHhhcce
Q 009538 161 AFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~ 177 (532)
++..++..++++...|+
T Consensus 151 ~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 151 AAVAAAGIILVLAALPA 167 (368)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 66555544444443333
No 14
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=8.7e-23 Score=224.45 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=117.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+++.+++.+++.++++++|+++||+ |||+++++++++++++++++++++ +
T Consensus 200 s~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~------------------------s 254 (742)
T TIGR01299 200 PDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ------------------------G 254 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh------------------------h
Confidence 567889999999999999999999999996 999999999999999999999885 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-----------
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD----------- 150 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~----------- 150 (532)
++.++++|+++|+|.|+..|+...+++|++|+ +.|+..++++.....+|.++++.++..+...
T Consensus 255 ~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~------~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~ 328 (742)
T TIGR01299 255 YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ------EKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAY 328 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccc
Confidence 77899999999999999999999999999874 2345678888888999999998876655432
Q ss_pred --ccchhhhHHHHHHHHHHHHH
Q 009538 151 --VSWAWGLGIPAFMMFLSCAM 170 (532)
Q Consensus 151 --~gw~~~F~v~~~~~~l~~~~ 170 (532)
.+||+.|++.++..++.++.
T Consensus 329 ~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 329 QFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred ccccHHHHHHHHHHHHHHHHHH
Confidence 46899998877765555443
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.92 E-value=1.6e-22 Score=211.11 Aligned_cols=139 Identities=17% Similarity=0.140 Sum_probs=121.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+.+++.+.+.++..+++++.|+++||+ ||||++..+.++..++.++++++.
T Consensus 47 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 101 (406)
T PRK11551 47 LDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGLFSLATAQAW------------------------ 101 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3678899999999999999999999999996 999999999999999998888874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
++..+++.|+++|++.+...|...+++.|++|+ ++|++.+++++...++|..+++.+++.+.+..+||+.|++.
T Consensus 102 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 175 (406)
T PRK11551 102 DFPSLLVARLLTGVGLGGALPNLIALTSEAVGP------RLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVG 175 (406)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 577899999999999999999999999999864 23456899999999999999999999999999999999987
Q ss_pred HHHHHHHHHH
Q 009538 161 AFMMFLSCAM 170 (532)
Q Consensus 161 ~~~~~l~~~~ 170 (532)
++..++..+.
T Consensus 176 ~~~~~~~~~~ 185 (406)
T PRK11551 176 GVGPLLLVPL 185 (406)
T ss_pred HHHHHHHHHH
Confidence 7654444433
No 16
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.2e-22 Score=201.70 Aligned_cols=340 Identities=16% Similarity=0.157 Sum_probs=231.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|..+++++++.|.+++.+++|+-..++||+ .||++++....+|++|.+++++++
T Consensus 45 vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~lFi~~n~l~alAp------------------------ 99 (394)
T COG2814 45 VSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLALFIVSNLLSALAP------------------------ 99 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3678899999999999999999999999995 999999999999999999999995
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
|+..++++|++.|+..|.+.+....+.+|..||++ |++++++...+..+..++|..+|.++.+.+|||+.|++-
T Consensus 100 ~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~i 173 (394)
T COG2814 100 SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAI 173 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHH
Confidence 78999999999999999999999999999998743 345899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhcceeeecCCCC--CchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhh
Q 009538 161 AFMMFLSCAMFFLGSRLYAKVKPEG--SPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDK 238 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (532)
.+..++.++..+...| +...+.. .+..+..+
T Consensus 174 a~l~ll~~~~~~~~lP--~~~~~~~~~~~~~~~~~--------------------------------------------- 206 (394)
T COG2814 174 AVLALLALLLLWKLLP--PSEISGSLPGPLRTLLR--------------------------------------------- 206 (394)
T ss_pred HHHHHHHHHHHHHhCC--CccCCCCCCcchhHHHH---------------------------------------------
Confidence 8888877777777666 1111100 00000000
Q ss_pred hcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCcccee-Chh
Q 009538 239 AAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKI-PAA 317 (532)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 317 (532)
..++.+....++..++.....+..|.+..+.+ .+..+ +.. ...
T Consensus 207 --------------------------~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L-------~~v~g---~s~~~vs 250 (394)
T COG2814 207 --------------------------LLRRPGVLLGLLATFLFMTGHFALYTYIRPFL-------ESVAG---FSVSAVS 250 (394)
T ss_pred --------------------------HhcCchHHHHHHHHHHHHcchhhhHHhHHHHH-------HHccC---CCHhHHH
Confidence 00001111112222222222333332222222 21111 111 123
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.......++.+++..+.+|+ .|| . +.+.+...+.+.++.++.+...
T Consensus 251 ~~Ll~~Gv~~~~Gn~~gGrl----~dr-~-------~~~~l~~~~~l~a~~~l~l~~~---------------------- 296 (394)
T COG2814 251 LVLLAFGIAGFIGNLLGGRL----ADR-G-------PRRALIAALLLLALALLALTFT---------------------- 296 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhh----ccc-c-------chhHHHHHHHHHHHHHHHHHHh----------------------
Confidence 44455566666666665554 554 2 2244555556666665555543
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
..+.+..+...++.+++........+...++..| +.++.+++++....++|..+|..+.|.+.|..
T Consensus 297 -~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~------------ 362 (394)
T COG2814 297 -GASPALALALLFLWGFAFSPALQGLQTRLARLAP-DAADLAGSLNVAAFNLGIALGAALGGLVLDAL------------ 362 (394)
T ss_pred -cchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------
Confidence 1244555555555666665555555555566455 45899999999999999999999999998753
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCAK 506 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~~ 506 (532)
++....+..+.+.+++.+..+...+
T Consensus 363 ----g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 363 ----GYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3566677777777777766665543
No 17
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.91 E-value=1.6e-22 Score=211.94 Aligned_cols=364 Identities=13% Similarity=0.038 Sum_probs=224.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.++..+++++.|+++||+ |||+++..+.++.+++.++++...... .++
T Consensus 50 s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~~~~~~-------------------~~~ 109 (417)
T PRK10489 50 STLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLALNAFLP-------------------EPS 109 (417)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHHHHHcC-------------------CCc
Confidence 567889999999999999999999999996 999999999998888887765421000 025
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.+++.|+++|++.+...+...+++.|++|++ ++++..++.+...++|..+||.+++++.+..+|+|.|++.+
T Consensus 110 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~ 183 (417)
T PRK10489 110 LLAIYLLGLWDGFFGSLGVTALLAATPALVGRE------NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAA 183 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH------HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHH
Confidence 778899999999999988888899999987642 23457888889999999999999999988889999999877
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcc
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAI 241 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (532)
+..++..+..+. .|+. ++++++..+..+ +..+
T Consensus 184 ~~~~~~~~~~~~-l~~~---~~~~~~~~~~~~----------------------------------------~~~~---- 215 (417)
T PRK10489 184 AGTFITLLPLLR-LPAL---PPPPQPREHPLR----------------------------------------SLLA---- 215 (417)
T ss_pred HHHHHHHHHHHh-CCCC---CCCCcccccchH----------------------------------------HHHH----
Confidence 766555443322 2221 111000000000 0000
Q ss_pred cCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhhh
Q 009538 242 MTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYAI 321 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
.+ ......+.+...+...+.......... ..+.+.....+.+. ...+....
T Consensus 216 ---------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~--------~~~g~~~~ 266 (417)
T PRK10489 216 ---------------GF-----RFLLASPVVGGIALLGGLLTMASAVRV-LYPALADEVWQMGA--------AQIGLLYA 266 (417)
T ss_pred ---------------HH-----HHHHcChHHHHHHHHHHHHHHHHhHHH-hhHHHHHhccCCCh--------hHhHHHHH
Confidence 00 000000111111111111111111111 11111111011110 11223333
Q ss_pred hhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccch
Q 009538 322 FSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLS 401 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (532)
...++.+++..+.+++ .+|. ++.+.+..+.++.+++++..... .+
T Consensus 267 ~~~~g~~ig~~~~~~l----~~~~-------~~~~~l~~~~~~~~~~~~~~~~~------------------------~~ 311 (417)
T PRK10489 267 AVPLGAALGALTSGWL----AHSA-------RPGLLMLLSTLGSFLAVGLFGLM------------------------PM 311 (417)
T ss_pred HHHHHHHHHHHHHHHh----hhcc-------CcchHHHHHHHHHHHHHHHHHcc------------------------ch
Confidence 4445555555554443 2321 12234555666665565544432 23
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcch
Q 009538 402 GLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKG 481 (532)
Q Consensus 402 ~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (532)
.+......++.+++.+...+..++++.+.+|++.||+++|+++..+.+|..+++.+.|.+.+..+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g--------------- 376 (417)
T PRK10489 312 WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT--------------- 376 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc---------------
Confidence 44555666777888887777778899999999999999999999999999999999999987431
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccc
Q 009538 482 RLDYFYYLVAALGLLNFGFFLLCAKWYKYKGSGDGAPE 519 (532)
Q Consensus 482 ~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 519 (532)
+...++..+++.++..+......+++|++++||.+++
T Consensus 377 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 377 -PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred -hhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 2345555565555555555556677777776665443
No 18
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.91 E-value=4.2e-22 Score=207.46 Aligned_cols=339 Identities=15% Similarity=0.104 Sum_probs=215.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|+.+.+++.+++.++..+++++.|+++||+ ||||++..+.++++++++++.++...... ...+
T Consensus 49 s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~ 111 (399)
T PRK05122 49 SAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCALSGLLYLLAGLLAAW----------------PVLS 111 (399)
T ss_pred cHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHHHHHHHHHhhhhhcc----------------chhH
Confidence 678899999999999999999999999996 99999999999999998887765311100 0025
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
+..+++.|+++|+|.+...+....++.|++++++ |+++++++....++|.++|+.+++++.++.||++.|++..
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 185 (399)
T PRK05122 112 LLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIM 185 (399)
T ss_pred HHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 6789999999999999999999999999876422 2457888888999999999999999999999999988766
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcc
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAI 241 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (532)
+..++..+. .. +.++.++++++..
T Consensus 186 ~~~~~~~~~---~~-~~~~~~~~~~~~~---------------------------------------------------- 209 (399)
T PRK05122 186 LLALLGLLL---AR-PRPAVPPVKGERL---------------------------------------------------- 209 (399)
T ss_pred HHHHHHHHH---Hh-cCCCCCCCCccch----------------------------------------------------
Confidence 543332221 11 1111111000000
Q ss_pred cCCcccccCCCCCCCCCccchhhhhhhhhhhhhh-HhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhh
Q 009538 242 MTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRV-IPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYA 320 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (532)
++ ++ ..|+.... ....+....+.......+.++ .. ...+ . .....
T Consensus 210 ---------------~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-~---------~~~~~ 255 (399)
T PRK05122 210 ---------------PF----RR---VLGRVWPYGMGLALASIGFGTIATFITLYY-AA-RGWD-G---------AALAL 255 (399)
T ss_pred ---------------hH----HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-cccc-c---------chHHH
Confidence 00 00 01111100 011111111111111111111 11 1110 0 11112
Q ss_pred hhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccc
Q 009538 321 IFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSL 400 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (532)
....++.+++.++.+++ .+|+++| +.+..+..+.+++....... .
T Consensus 256 ~~~~~~~~~~~~~~g~l----~~r~~~~-------~~~~~~~~~~~~~~~~~~~~------------------------~ 300 (399)
T PRK05122 256 TLFGVAFVGARLLFGNL----INRLGGL-------RVAIVSLLVEILGLLLLWLA------------------------P 300 (399)
T ss_pred HHHHHHHHHHHHHHHHH----HHHhccH-------HHHHHHHHHHHHHHHHHHHh------------------------c
Confidence 22333344444443333 4554333 45556666666665554432 2
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.+..+...++.+++.+...+.......+.+|++.||++.|+++....+|..+++.+.+.+.+..
T Consensus 301 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--------------- 365 (399)
T PRK05122 301 SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF--------------- 365 (399)
T ss_pred cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------------
Confidence 34455666788888888888877788889999999999999999999999999999999887643
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLC 504 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~ 504 (532)
++...|+..+++.+++.+..++.
T Consensus 366 -g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 366 -GYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHh
Confidence 35667777777777766655544
No 19
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=2.7e-22 Score=206.79 Aligned_cols=142 Identities=14% Similarity=0.157 Sum_probs=125.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+.+++.+++.++..++.++.|+++||+ |||+++.++.++++++.+++++++
T Consensus 26 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 80 (399)
T TIGR00893 26 LSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------------------ 80 (399)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------------------
Confidence 3678889999999999999999999999996 999999999999999999999874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.++++|+++|++.+...|....++.|++|+ ++|++.++++....++|.++||.+++++.+..+||+.|++.
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 154 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA------SERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIE 154 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH------HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 577899999999999999999999999999874 23456899999999999999999999998899999999988
Q ss_pred HHHHHHHHHHHHh
Q 009538 161 AFMMFLSCAMFFL 173 (532)
Q Consensus 161 ~~~~~l~~~~~~~ 173 (532)
++..++..+..+.
T Consensus 155 ~~~~~~~~~~~~~ 167 (399)
T TIGR00893 155 GVLGIIWGVLWLK 167 (399)
T ss_pred HHHHHHHHHHhhh
Confidence 7765555444433
No 20
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=3.1e-22 Score=215.14 Aligned_cols=135 Identities=14% Similarity=0.224 Sum_probs=117.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
+.+.+++.+++.++..+++++.|+++||+ |||++++++.++.+++.+++++++ ++
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------------------~~ 180 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------------------NY 180 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc------------------------cH
Confidence 57789999999999999999999999996 999999999999999999999874 57
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHH
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAF 162 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~ 162 (532)
+.+++.|+++|++.+...+....++.|++|++ .|+...+++..+..+|.+++|.++.++.+ ||+.|++.++
T Consensus 181 ~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i 251 (505)
T TIGR00898 181 TVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK------QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSL 251 (505)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHhheecChh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHH
Confidence 88999999999999999999999999998752 22457778888999999999998877754 9999998877
Q ss_pred HHHHHHHHH
Q 009538 163 MMFLSCAMF 171 (532)
Q Consensus 163 ~~~l~~~~~ 171 (532)
..++..+..
T Consensus 252 ~~~~~~~~~ 260 (505)
T TIGR00898 252 PTFLFFLLS 260 (505)
T ss_pred HHHHHHHHH
Confidence 655554444
No 21
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.91 E-value=2.7e-24 Score=222.02 Aligned_cols=366 Identities=34% Similarity=0.551 Sum_probs=236.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccccccccccCCCCC
Q 009538 35 YKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPN 114 (532)
Q Consensus 35 r~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~ 114 (532)
.|+++++.+++.+|++++++++..+.+ +.+.+...++++..+.++|.|+.+|+..++++|+|+++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~---------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~ 65 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL---------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED 65 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC---------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh---------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc
Confidence 489999999999999999888754322 11234678999999999999999999999999999865
Q ss_pred CCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHHHHhhcceeeec-CCCCCchhh-HH
Q 009538 115 TESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKV-KPEGSPLAS-TV 192 (532)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 192 (532)
+ ++++.++++++|+++|+|.++++.+.+++.++.||.+.|.++.+.+++++++++..++++... +|.+++..+ ..
T Consensus 66 ~---~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~ 142 (372)
T PF00854_consen 66 D---DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIK 142 (372)
T ss_dssp T---TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SH
T ss_pred c---hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHH
Confidence 4 244567999999999999999999999999999999999999999999999999999988776 666666666 33
Q ss_pred HHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcccCCcccccCCCCCCCCCcc-chhhhhhhhhh
Q 009538 193 QVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAIMTPEDQIKSDGSAINPWRL-SSMQKVEEVKV 271 (532)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 271 (532)
.+.....+++....++...+..+. ..... ...........+...+..++. ..|.. +..++.++.|.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~k~ 209 (372)
T PF00854_consen 143 LVLVAAFKKRKLAVPKGSSWLDWA-LFQYS---ERSIFGIIVFIRAAVIFFPEI---------FFWALFCQVQRVEELKA 209 (372)
T ss_dssp HHHHHHHHHHCCCH-HHHHHHHHH-HHHHC---CCCCCCCCCHHHHHHHHCCCH---------HHHTTTSSTTTHHHCCH
T ss_pred HHHHHHHHHhhcccccchHHHHHh-hhhhh---hhhhhhhhhhccchhhhhhhh---------hhcccCCccceeeeeee
Confidence 333444444443332111111110 00000 000000000000000100000 00000 11234455677
Q ss_pred hhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCcc-ceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCC
Q 009538 272 LIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTH-FKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEG 350 (532)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 350 (532)
+.+.++.+...+.++....+.......+...++...+ + +++|++.++++|.+.+++..|++|++.+|+.+ ++.
T Consensus 210 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~----~~~ 283 (372)
T PF00854_consen 210 LIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIG--GLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLR----RGI 283 (372)
T ss_dssp HHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS--------SGGGTTHHHHHCHHHHHHHHHHCCCTTT----T--
T ss_pred eeeccccCeEEEEeeehhhhhhhHHHHhccccccccc--cccccccchhhhHHHHHHHHHHHHHHHHHhHHhh----hcc
Confidence 7777777788888888888887777777777776665 5 88999999999999999999999999988887 222
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcc
Q 009538 351 GITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQ 430 (532)
Q Consensus 351 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~ 430 (532)
..+...++.+|+++..++++..+..+.++......+ ...+.+|.+..+++.+++|.+..+...+..+|.
T Consensus 284 ~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~ 352 (372)
T PF00854_consen 284 QPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPC-----------GKVSPWWQVPMYIFWLIPEYFLSGTGESAAYEF 352 (372)
T ss_dssp ----HHHHHHH-HHHHHHHHTTTHHHH---HH---------------TT--THHHHHHHHHHHHHHHTTTTHHHHHHHHH
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHhhhhhccccc-----------CCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 367888999999999999988887776444333222 234557778999999999999999989988888
Q ss_pred cCchhHHHHHHHHHHHHH
Q 009538 431 FPENMRSIGGSLAFVGFA 448 (532)
Q Consensus 431 ~P~~~rg~~~gl~~~~~~ 448 (532)
+|++..+.++|++.....
T Consensus 353 a~~~~p~~m~~~~~~~~~ 370 (372)
T PF00854_consen 353 APSRAPSSMMGIWFALSA 370 (372)
T ss_dssp TTTT-SSSSTHHHHHHH-
T ss_pred hHHhhhHHHHHHHHHHhc
Confidence 887777777777765543
No 22
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=4.3e-22 Score=211.84 Aligned_cols=146 Identities=10% Similarity=0.099 Sum_probs=124.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+++.+.|.+++.++++++|+++||+ |||+++.++.++++++.+++.++.. .+
T Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~----------------------~~ 130 (465)
T TIGR00894 74 SGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG----------------------GG 130 (465)
T ss_pred CHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH----------------------cC
Confidence 567789999999999999999999999996 9999999999999999988866532 14
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc-cchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-SWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~-gw~~~F~v~ 160 (532)
+..+++.|+++|++.|...|....++.|++|+ ++|++.++++..+.++|.+++|.+++++.+.+ |||+.|++.
T Consensus 131 ~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~ 204 (465)
T TIGR00894 131 IALVVFCRVIQGLAQGSVSPATHKIIVKWAPP------KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVF 204 (465)
T ss_pred chHHHHHHHHHHHhcccchhhHHHHHHhcCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhh
Confidence 56799999999999999999999999999874 33467899999999999999999999998884 999999998
Q ss_pred HHHHHHHHHHHHhhcc
Q 009538 161 AFMMFLSCAMFFLGSR 176 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~ 176 (532)
++..++..++++...+
T Consensus 205 ~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 205 GIVGCAWSLLWFVFPA 220 (465)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 8876655554444433
No 23
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=4.4e-22 Score=203.58 Aligned_cols=329 Identities=12% Similarity=0.040 Sum_probs=212.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+++.++..+++++.|+++||+ ||||+++.+.++..++.++++++...+ ..+
T Consensus 32 s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~ 91 (365)
T TIGR00900 32 SASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPFVALLG-------------------GLN 91 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHHHHcC-------------------CCc
Confidence 567889999999999999999999999996 999999999999999998888875211 026
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.++++|+++|++.+...|...+++.|++|++ +|++.++++....++|.++||.+++++.++.|||+.|++.+
T Consensus 92 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 165 (365)
T TIGR00900 92 IWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE------QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDA 165 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 788999999999999999999999999998742 34568999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchh-hHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhc
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLA-STVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAA 240 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (532)
+..++..+..+..+++.++ ++++++.+ +..+.. .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------------------------------------~---- 200 (365)
T TIGR00900 166 VGFAISALLIVSVRIPELA-ASEIQALSNAVLRDT----------------------------------------R---- 200 (365)
T ss_pred HHHHHHHHHHHhcccccCC-CccccccchhHHHHH----------------------------------------H----
Confidence 7655554433332211100 00000000 000000 0
Q ss_pred ccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhH-HHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhh
Q 009538 241 IMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPI-WASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASY 319 (532)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
..+ ......+.+...+.. +.....+........+.+.......+. ...+..
T Consensus 201 ---------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 252 (365)
T TIGR00900 201 ---------------EGI-----KFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGS--------THYGWV 252 (365)
T ss_pred ---------------hHH-----HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch--------HHHHHH
Confidence 000 000001111111111 111111111111111222111111110 112233
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
.....++.+++.++.+++ .+|.++| +.+..+..+.+++++..... .+
T Consensus 253 ~~~~~~~~~~~~~~~~~l----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----------------------~~ 299 (365)
T TIGR00900 253 LAAFGLGALLGALLLGLL----GRYFKRM-------ALMTGAIFVIGLAILVVGLT----------------------PP 299 (365)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHhchh-------HHHHHHHHHHHHHHHHHHhh----------------------ch
Confidence 333444445555554332 4443332 45555666666665555443 11
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
+.+..++..++.+++.+...+...++..|.+|++.||+++|+.+....++..+++.+.+.+.|
T Consensus 300 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 300 -NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666777888999998899999999999999999999999999999999999999998876
No 24
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=4.5e-22 Score=213.06 Aligned_cols=134 Identities=17% Similarity=0.209 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 009538 10 INIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGL 89 (532)
Q Consensus 10 ~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 89 (532)
.+++.++..+++++.|+++||+ |||+++.++.++++++++++++++++.++.. .....+++.|
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~----------------~a~~~l~~~R 125 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIGLIPSYATIGI----------------WAPILLLLCK 125 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHhcccHHHHHH----------------HHHHHHHHHH
Confidence 4667788999999999999996 9999999999999999999999864321000 0112489999
Q ss_pred HHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc--------ccccchhhhHHHH
Q 009538 90 GLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ--------SDVSWAWGLGIPA 161 (532)
Q Consensus 90 ~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~--------~~~gw~~~F~v~~ 161 (532)
+++|+|.|+..|....+++|++|+++ |++..++...+.++|..+|+.+...+. .++|||++|++.+
T Consensus 126 ~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~ 199 (490)
T PRK10642 126 MAQGFSVGGEYTGASIFVAEYSPDRK------RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIAL 199 (490)
T ss_pred HHHHhHhHhhHHHHHHHHHHhCCCCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHH
Confidence 99999999999999999999987532 244677777777888887776554432 2689999999977
Q ss_pred HHHHH
Q 009538 162 FMMFL 166 (532)
Q Consensus 162 ~~~~l 166 (532)
+..++
T Consensus 200 ~~~l~ 204 (490)
T PRK10642 200 PLGII 204 (490)
T ss_pred HHHHH
Confidence 65443
No 25
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=3.3e-22 Score=211.87 Aligned_cols=141 Identities=20% Similarity=0.275 Sum_probs=120.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+++.+++.++..++++++|+++||+ |||++++++.+++.++.+++.++++. .+
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~---------------------~~ 126 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA---------------------LS 126 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc---------------------cc
Confidence 368899999999999999999999999996 99999999999999999999776421 24
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhh---hhccccccchhhhH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVI---VYVQSDVSWAWGLG 158 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~---g~i~~~~gw~~~F~ 158 (532)
++.++++|+++|+|.|...+....+++|++|+++ |++.+++++...++|.++++.++ +......+||+.|+
T Consensus 127 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~ 200 (481)
T TIGR00879 127 VEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLG 200 (481)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHH
Confidence 5689999999999999999999999999987532 34578999999999999999999 77777889999999
Q ss_pred HHHHHHHHHHHH
Q 009538 159 IPAFMMFLSCAM 170 (532)
Q Consensus 159 v~~~~~~l~~~~ 170 (532)
+.++..++..+.
T Consensus 201 ~~~~~~~~~~~~ 212 (481)
T TIGR00879 201 LQLIPAGLLFLG 212 (481)
T ss_pred HHHHHHHHHHHH
Confidence 966655544443
No 26
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.9e-22 Score=209.14 Aligned_cols=404 Identities=14% Similarity=0.120 Sum_probs=244.2
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 6 ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 6 ~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
-+.++++|.+|.++++..+|+++||+ |||..++++.++..++.++..++-..+ ++.++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~---------------------~~e~l 119 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAP---------------------SFEML 119 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhh---------------------hHHHH
Confidence 36789999999999999999999996 999999999999999999988875433 68899
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhh-hh-ccccccchhhhHHHHHH
Q 009538 86 FTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVI-VY-VQSDVSWAWGLGIPAFM 163 (532)
Q Consensus 86 ~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~-g~-i~~~~gw~~~F~v~~~~ 163 (532)
+++|++.|+..|......+.|+.|..|. +.||..-.....+..+|.++|..++ .. +.....|++.+.++++.
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~------~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPK------NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChh------hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHH
Confidence 9999999999999999999999998664 2334567777888889998885553 22 34566799999998886
Q ss_pred HHHHHHHH--Hhhcceeeec-CCCCCchhhHHHHHHHHHHhcccCC-CCCCcccccccCCcccccCCCCCCCcccchhhh
Q 009538 164 MFLSCAMF--FLGSRLYAKV-KPEGSPLASTVQVFVAAIKKRHLKL-PEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKA 239 (532)
Q Consensus 164 ~~l~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (532)
.++.++++ +..+|+|... +.+.++.++..+.+ ++.+. +++.|+...+.+.++
T Consensus 194 ~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y------~G~~~~~~~~e~~~~e~~~~~------------------ 249 (485)
T KOG0569|consen 194 ALLQLALLPFLPESPKYLLIKKGDEEEARKALKFY------RGKEDVEAEIEEMLREIEEEE------------------ 249 (485)
T ss_pred HHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHH------hCCCcchhHHHHHHHHHHHhc------------------
Confidence 66655543 3345666443 33322222222211 11110 000000000000000
Q ss_pred cccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhh
Q 009538 240 AIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASY 319 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
.++.+....+..+.. ...++.....+.+.....+........+++.+......... ..+..+...
T Consensus 250 ---------~~~~~~~sl~~~~~~--~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~----~a~~an~~~ 314 (485)
T KOG0569|consen 250 ---------LEKKKQISLRQLLKN--PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE----EAQYANLGI 314 (485)
T ss_pred ---------cccccCCcHHHHhcC--cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH----HHHHHHHHH
Confidence 000011111111110 01122222222222222222211111222111111111110 111223344
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
+.++.+..+++..+ .+|++|| ..++.++.++.++...+.+......+.. +
T Consensus 315 g~v~~~~t~~~~~l--------id~~gRR-------pLll~~~~~~~~~~~~~~~~~~l~~~~~---------------~ 364 (485)
T KOG0569|consen 315 GIVNLLSTLVSPFL--------IDRLGRR-------PLLLISLSLMAVALLLMSIALFLSNSFG---------------S 364 (485)
T ss_pred HHHHHHHHHHHHHH--------HHhcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------h
Confidence 45555555555555 5555766 5666666666666555554433221110 1
Q ss_pred chHHHHHHHHHHHHHHhH-hhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCC
Q 009538 400 LSGLWLIPQLSLIGFSEA-FTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDL 478 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~-~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (532)
+-.+..+...++..+... ...|..+-+.+|.+|++.|+.++++..+.+++.+++.....+.+.+..+
T Consensus 365 ~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g------------ 432 (485)
T KOG0569|consen 365 WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG------------ 432 (485)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 112222334444333333 4477889999999999999999999999999999999999999887542
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccccccc
Q 009538 479 NKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKGSGDGAPEVAME 523 (532)
Q Consensus 479 ~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (532)
.++|..+++.+++..+..+...||+|+|+.+|..++.+++
T Consensus 433 -----~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 433 -----PYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred -----chhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 2678888889999999999999999999887765554433
No 27
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=8.1e-22 Score=207.84 Aligned_cols=137 Identities=11% Similarity=0.117 Sum_probs=121.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|..+.+++.+.+.++..++++++|+++||+ |||+++.++.++++++.+++++++
T Consensus 55 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 109 (434)
T PRK11663 55 LSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGFSS------------------------ 109 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHHHh------------------------
Confidence 3677899999999999999999999999996 999999999999999999999885
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.+++.|++.|++.|...+....++.|++++ ++|++.+++++...++|..++|.+++++.+++|||+.|++.
T Consensus 110 ~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~------~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~ 183 (434)
T PRK11663 110 SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR------TERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIA 183 (434)
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 577899999999999999999999999999874 23456899999999999999999999999999999999987
Q ss_pred HHHHHHHH
Q 009538 161 AFMMFLSC 168 (532)
Q Consensus 161 ~~~~~l~~ 168 (532)
++..++..
T Consensus 184 ~i~~~~~~ 191 (434)
T PRK11663 184 GIIAIVVG 191 (434)
T ss_pred HHHHHHHH
Confidence 77554443
No 28
>PRK10504 putative transporter; Provisional
Probab=99.90 E-value=2.5e-21 Score=206.28 Aligned_cols=145 Identities=14% Similarity=0.087 Sum_probs=125.5
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.|.++..++.+++|+++||+ ||||+++.+.++++++.+++++++ +
T Consensus 43 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------~ 97 (471)
T PRK10504 43 SPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTLGSLFCALSG------------------------T 97 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHhC------------------------C
Confidence 567788999999999999999999999996 999999999999999999888764 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
+..++++|+++|+|.|+..|....++.|.+|+ +++++.++.+....++|..+||.+++++.++.|||+.|++..
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~ 171 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPR------EQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINI 171 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHH
Confidence 67899999999999999999999999998763 234568889999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhcce
Q 009538 162 FMMFLSCAMFFLGSRL 177 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~ 177 (532)
+...+..+......|+
T Consensus 172 ~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 172 PVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 7766665555444444
No 29
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=6.2e-22 Score=209.87 Aligned_cols=141 Identities=12% Similarity=0.067 Sum_probs=118.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.++..++.+++|+++||+ |||++++.+.+++.++.+++++++ +
T Consensus 52 s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------------------------~ 106 (455)
T TIGR00892 52 TYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS------------------------N 106 (455)
T ss_pred chhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh------------------------h
Confidence 568889999999999999999999999995 999999999999999999998875 3
Q ss_pred HHHHH-HHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 82 LAFLF-TGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~-~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
++.++ ..|+++|++.|...+...+++.++++ ++|+++.++.+.+.++|..++|.+++++.+.+|||+.|++.
T Consensus 107 ~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-------~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~ 179 (455)
T TIGR00892 107 VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-------RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLIL 179 (455)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-------hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 55555 45799999999876777788889874 12356899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhh
Q 009538 161 AFMMFLSCAMFFLG 174 (532)
Q Consensus 161 ~~~~~l~~~~~~~~ 174 (532)
++..++..+..++.
T Consensus 180 ~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 180 GGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHh
Confidence 88766554443333
No 30
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=4.3e-21 Score=200.47 Aligned_cols=140 Identities=16% Similarity=0.034 Sum_probs=119.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|+.+.+++.+.+.+++.+++++.|+++||+ ||||+++++..++.++.+++++++ +
T Consensus 46 s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------------------------~ 100 (406)
T PRK15402 46 GAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ------------------------S 100 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc------------------------c
Confidence 567889999999999999999999999996 999999999999999999988874 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.+++.|+++|++.+...+...+++.|.+++++ +.+.+++.+....+|..+||.+++++.++.+||+.|++.+
T Consensus 101 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~ 174 (406)
T PRK15402 101 IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFA 174 (406)
T ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHH
Confidence 6789999999999999988999999999987422 2346777777888899999999999988899999999877
Q ss_pred HHHHHHHHHHH
Q 009538 162 FMMFLSCAMFF 172 (532)
Q Consensus 162 ~~~~l~~~~~~ 172 (532)
+..++..+..+
T Consensus 175 ~~~~~~~~~~~ 185 (406)
T PRK15402 175 ALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHH
Confidence 76665544433
No 31
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=4.9e-22 Score=212.21 Aligned_cols=366 Identities=13% Similarity=0.149 Sum_probs=220.4
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+|+.+.|.++..++.+++|+++||+ |||++++++.+++.++++++++++ +
T Consensus 35 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------~ 89 (485)
T TIGR00711 35 SLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCGVAP------------------------N 89 (485)
T ss_pred ChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhCcC------------------------C
Confidence 567889999999999999999999999996 999999999999999999999874 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
+..++++|+++|++.+...|...+++.|++|+ ++|++.+++++....+|..+||.+++++.++++||+.|++.+
T Consensus 90 ~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~ 163 (485)
T TIGR00711 90 LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP------EKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINV 163 (485)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhh
Confidence 77899999999999999999999999999874 234568999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHH----HHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchh
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVA----AIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLD 237 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (532)
+..++..+..+...|+.++. +.++.+.....+.. .......+.++.++. . ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~----~------------~~~~~~~~ 225 (485)
T TIGR00711 164 PIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWF----D------------SNEILILS 225 (485)
T ss_pred HHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCC----C------------chHHHHHH
Confidence 76655554444433332111 11111111100000 000000000000000 0 00000000
Q ss_pred h------hcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCcc
Q 009538 238 K------AAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTH 311 (532)
Q Consensus 238 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (532)
. ..... ++. +.+.+..+++ ..++++.....+..++....++...... +.+.......+.
T Consensus 226 ~~~~~~~~~~~~--~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~g~s~------ 290 (485)
T TIGR00711 226 ITGLVAIIAFVV--WEL-TDDNPLVDLR-----LFKYRNFTIGCVYMSLLGLGLYGSFYLL-PLYLQQVLGYTA------ 290 (485)
T ss_pred HHHHHHHHHHHH--HHH-cCCCCccCHH-----HHcCCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCH------
Confidence 0 00000 000 0000001110 1111111111111111111111111111 111111111110
Q ss_pred ceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccc
Q 009538 312 FKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLE 391 (532)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (532)
...+.......++.+++.++..++ .+|+++| +.+..+..+.+++..+.....
T Consensus 291 --~~~g~~~~~~~~~~~~~~~~~g~l----~~r~~~~-------~~~~~g~~~~~~~~~~~~~~~--------------- 342 (485)
T TIGR00711 291 --LQAGLHILPVGLAPMLSSPIAGRM----GDKIDPR-------KLVTIGLILYAVGFYWRAFTF--------------- 342 (485)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHH----HhhcCcH-------HHHHHHHHHHHHHHHHHhccC---------------
Confidence 112233344455556666664443 5554433 556677777766665554210
Q ss_pred ccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 392 QRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
....+.+..+...++.++|.+...++......+..|++.+|+++|+.+..+.+|+.+++.+.+.+.+.
T Consensus 343 -----~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 343 -----TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12234556666678889999888877788888999999999999999999999999999999988763
No 32
>PRK12382 putative transporter; Provisional
Probab=99.90 E-value=2e-21 Score=202.04 Aligned_cols=341 Identities=13% Similarity=0.083 Sum_probs=213.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|..+.+++.+.+.++..++++++|+++||+ ||||+++.+.+++.++.+........+. ....
T Consensus 48 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~----------------~~~~ 110 (392)
T PRK12382 48 FGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAGLAYLLAAILPV----------------SAPF 110 (392)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHHHHHHhhhcccc----------------chhH
Confidence 3678899999999999999999999999996 9999999999888877655433211110 0013
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
++..++++|+++|+|.+...|...+++.|.+|++ +|++++++++.+.+.|.++||.+++++.+++||++.+.+.
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 184 (392)
T PRK12382 111 KFALLVVGRLILGFGESQLLTGALTWGLGLVGPK------HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTT 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc------ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHH
Confidence 6788999999999999999998889999988642 2345799999999999999999999999989999987765
Q ss_pred HHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhc
Q 009538 161 AFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAA 240 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (532)
.+..++... .. ++.++.++++++.. +.
T Consensus 185 ~~~~~~~~~---~~-~~~~~~~~~~~~~~--------------------------------------------~~----- 211 (392)
T PRK12382 185 MVLPLLAWA---FN-GTVRKVPAHAGERP--------------------------------------------SL----- 211 (392)
T ss_pred HHHHHHHHH---HH-HhccCCCCCcccCc--------------------------------------------hH-----
Confidence 544322221 11 11111111000000 00
Q ss_pred ccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhh
Q 009538 241 IMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYA 320 (532)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (532)
++..+..++. .+...+....+.......+.+ ..+ .... ..+...
T Consensus 212 ----------------------~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~-~~~-----~~~~------~~~~~~ 255 (392)
T PRK12382 212 ----------------------WSVVGLIWKP--GLGLALQGVGFAVIGTFVSLY-FAS-----KGWA------MAGFTL 255 (392)
T ss_pred ----------------------HHHHHHHHHh--HHHHHHHHHHHhHHHHHHHHH-HHh-----cCCc------hhHHHH
Confidence 0000000000 000111111111111111111 111 1110 011112
Q ss_pred hhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccc
Q 009538 321 IFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSL 400 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (532)
....++.+++.++.+++ .+|+++| +.+..+..+.+++.+..... .
T Consensus 256 ~~~~~~~~~~~~~~g~l----~~r~g~~-------~~~~~~~~~~~~~~~~~~~~------------------------~ 300 (392)
T PRK12382 256 TAFGGAFVLMRVLFGWM----PDRFGGV-------KVAIVSLLVETVGLLLLWLA------------------------P 300 (392)
T ss_pred HHHHHHHHHHHHHHHHH----HHhcCCC-------eehHHHHHHHHHHHHHHHHc------------------------c
Confidence 22333444445554443 5555444 34555666666665544432 1
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.+..++..++.+++.+...+.......+.+|++.||++.|+++....+|+.+++.+.+.+.|..
T Consensus 301 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~--------------- 365 (392)
T PRK12382 301 TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF--------------- 365 (392)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------
Confidence 34455566777888888888887888899999999999999999999999999999999998743
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLC 504 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~ 504 (532)
++...|...+++.+++.+..+..
T Consensus 366 -g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 366 -GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred -CchHHHHHHHHHHHHHHHHHHhh
Confidence 24567777777777666655443
No 33
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.90 E-value=7.6e-22 Score=210.02 Aligned_cols=148 Identities=11% Similarity=0.037 Sum_probs=119.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.++|.+++.++++++|+++||+ ||||++.+++++++++.++.++.... ..+
T Consensus 61 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~-------------------~~~ 120 (467)
T PRK09556 61 LSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS-------------------GSV 120 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-------------------ccc
Confidence 3678899999999999999999999999996 99999999999988888777663100 013
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc---cchhhh
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV---SWAWGL 157 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~---gw~~~F 157 (532)
++..+++.|+++|++.|...|....+++|++|+++ |+++++++....++|.++++.+..++.+.. +||..|
T Consensus 121 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f 194 (467)
T PRK09556 121 SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMF 194 (467)
T ss_pred hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHH
Confidence 68899999999999999999999999999998632 345789999999999999999887765543 699999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 009538 158 GIPAFMMFLSCAMFFLG 174 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~ 174 (532)
.+.++..++..+..+..
T Consensus 195 ~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 195 IFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88776655444444433
No 34
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=3.8e-22 Score=214.60 Aligned_cols=405 Identities=16% Similarity=0.131 Sum_probs=245.6
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHH
Q 009538 5 TATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAF 84 (532)
Q Consensus 5 ~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (532)
+.+|+.+++.++..+++++.|+++|++ |||++++++.+++.+|++++++|. |+.+
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~------------------------~~~~ 144 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP------------------------SWYQ 144 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh------------------------hHHH
Confidence 458999999999999999999999996 999999999999999999999995 6889
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-ccchhhhHHHHHH
Q 009538 85 LFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD-VSWAWGLGIPAFM 163 (532)
Q Consensus 85 l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~-~gw~~~F~v~~~~ 163 (532)
++++|+++|+|.|.....++.|++|+.|+ +.|+...+.++...++|..+|.+++....+. ++||..+++..+.
T Consensus 145 l~~GR~l~G~g~G~~~~~~piy~sEiap~------~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~ 218 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLAPVYISEIAPA------HIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIP 218 (513)
T ss_pred HHHHHHHhccchhhhhhcchhhHhhcCCh------hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHH
Confidence 99999999999999999999999998653 4456789999999999999996665555433 5999998887775
Q ss_pred HHHHHHHHHh--hcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcc
Q 009538 164 MFLSCAMFFL--GSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAI 241 (532)
Q Consensus 164 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (532)
.++..+.++. .+|++..++.+..+.....+.+ +..+ +++.+.++.. +.....
T Consensus 219 ~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l------~g~~-~~~~~~~~~~-------------------~~~~~~ 272 (513)
T KOG0254|consen 219 AVILALGMLFLPESPRWLIEKGRLEEAKRSLKRL------RGLS-PEDVEVELEL-------------------LKIKLL 272 (513)
T ss_pred HHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHH------hCCC-CcchHHHHHH-------------------HHHHHH
Confidence 4444443222 3455443332222222222111 1111 1010000000 000000
Q ss_pred cCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhhh
Q 009538 242 MTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYAI 321 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
.+...... ...|..+.. ....|+++..+.+..+...........+...+.+....+.. . .........
T Consensus 273 ----~~~~~~~~-~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~----~-~~~~~~~~~ 340 (513)
T KOG0254|consen 273 ----VEAEVAEG-KASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSD----T-FLASIILGV 340 (513)
T ss_pred ----Hhhhcccc-cccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCc----h-HHHHHHHHH
Confidence 00000000 000110000 01233333333333333222222211222111111111100 0 122233344
Q ss_pred hhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccch
Q 009538 322 FSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLS 401 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (532)
.+.++.++...+ .+|++|| ..++.|...+.+++++.+.......+.... .....
T Consensus 341 v~~~~t~~~~~l--------vd~~gRr-------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 394 (513)
T KOG0254|consen 341 VNFLGTLVATYL--------VDRFGRR-------KLLLFGAAGMSICLVILAVVGVFALYYPNS-----------SKGAG 394 (513)
T ss_pred HHHHHHHHHHHH--------HHHhccH-------HHHHHhHHHHHHHHHHHHHHHHHhccCCCc-----------ccchh
Confidence 455555555444 4444555 677888888888888777654322111000 11234
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcch
Q 009538 402 GLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKG 481 (532)
Q Consensus 402 ~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (532)
++.++..++++........+..|.+..|.+|.+.|+.+.++....+++.+.+-......+....+
T Consensus 395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~--------------- 459 (513)
T KOG0254|consen 395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG--------------- 459 (513)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------
Confidence 44555555566666667777788899999999999999999999999999888777776654221
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHhhhcccccCCCCCcccc
Q 009538 482 RLDYFYYLVAALGLLNFG-FFLLCAKWYKYKGSGDGAPEV 520 (532)
Q Consensus 482 ~~~~~~~~~~~~~vv~~~-~~~~~~~~~~~~~~~~~~~~~ 520 (532)
....|..+++++.+... +++++.+|+|+++.|+.+...
T Consensus 460 -~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 460 -IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELF 498 (513)
T ss_pred -ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence 13456666677776666 788889999999988765543
No 35
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=9.7e-22 Score=201.81 Aligned_cols=140 Identities=14% Similarity=0.100 Sum_probs=119.1
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+++.++..++++++|+++||+ |||+++.++.++.+++.+++++++
T Consensus 35 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------------------------ 89 (377)
T TIGR00890 35 VGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------------------------ 89 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH------------------------
Confidence 3678899999999999999999999999996 999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.++++|+++|++.|...+....++.+++|+ +|+++.+.+....++|.++++.+.+.+.+..|||+.|++.
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~ 162 (377)
T TIGR00890 90 SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYM 162 (377)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHH
Confidence 677899999999999998888888888888752 1345788999999999887766767776778999999998
Q ss_pred HHHHHHHHHHHH
Q 009538 161 AFMMFLSCAMFF 172 (532)
Q Consensus 161 ~~~~~l~~~~~~ 172 (532)
++..++..+..+
T Consensus 163 ~~~~~~~~~~~~ 174 (377)
T TIGR00890 163 GIIFLLVIVLGA 174 (377)
T ss_pred HHHHHHHHHHHH
Confidence 876655544433
No 36
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.90 E-value=3.3e-21 Score=203.05 Aligned_cols=138 Identities=16% Similarity=0.255 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHH---HHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 7 TTLINIFSGTTN---FATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 7 ~~i~~~~~~~~~---~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
+++.+.+..++. ++++++|+++||+ ||||++..+.++++++++++++++++.+.. ..+..
T Consensus 63 ~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~ 125 (432)
T PRK10406 63 LQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSLVIACLPGYETIG----------------TWAPA 125 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHhhcCCchhHH----------------HHHHH
Confidence 344455555444 8999999999996 999999999999999999999986432100 01245
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc--------ccccchh
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ--------SDVSWAW 155 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~--------~~~gw~~ 155 (532)
.+++.|+++|+|.|...|...++++|++|+++ |++..+..+...+.|.++++.++..+. ..+|||+
T Consensus 126 ~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~ 199 (432)
T PRK10406 126 LLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRI 199 (432)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 69999999999999999999999999987522 245778888888889888887765543 2689999
Q ss_pred hhHHHHHHHHHH
Q 009538 156 GLGIPAFMMFLS 167 (532)
Q Consensus 156 ~F~v~~~~~~l~ 167 (532)
+|++.++..++.
T Consensus 200 ~F~i~~~~~ll~ 211 (432)
T PRK10406 200 PFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHH
Confidence 999877765443
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.89 E-value=5.4e-21 Score=198.94 Aligned_cols=137 Identities=15% Similarity=0.199 Sum_probs=122.2
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+.+++++++.++..+++++.|+++||+ ||||++..+.++++++.+++++++
T Consensus 52 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~------------------------ 106 (394)
T PRK10213 52 ISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVLLTLSCLLVSFAN------------------------ 106 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHHHHC------------------------
Confidence 3678889999999999999999999999996 999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.+++.|+++|++.|...|...+++.|++|+ ++|++++++.....++|.++||.+++++.+++|||+.|++.
T Consensus 107 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~------~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~ 180 (394)
T PRK10213 107 SFSLLLIGRACLGLALGGFWAMSASLTMRLVPP------RTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAA 180 (394)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 678899999999999999999999999999864 23356899999999999999999999999999999999997
Q ss_pred HHHHHHHH
Q 009538 161 AFMMFLSC 168 (532)
Q Consensus 161 ~~~~~l~~ 168 (532)
++..++..
T Consensus 181 ~~l~~~~~ 188 (394)
T PRK10213 181 AVMGVLCI 188 (394)
T ss_pred HHHHHHHH
Confidence 76554443
No 38
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=3.8e-21 Score=201.32 Aligned_cols=144 Identities=14% Similarity=0.037 Sum_probs=123.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.++.+++|.+++.++++++|+++||+ |||++++.+..+++++++++++++ +
T Consensus 49 ~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------------~ 103 (413)
T PRK15403 49 DVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------------S 103 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------------C
Confidence 567789999999999999999999999996 999999999999999999999874 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
+..++++|+++|++.+...+....++.|+++++ ++++.++++....++|..+||.+++++.+++|||+.|++.+
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~ 177 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQT------KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIA 177 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 778999999999999877777788888987642 23457899999999999999999999998899999999988
Q ss_pred HHHHHHHHHHHhhcc
Q 009538 162 FMMFLSCAMFFLGSR 176 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~ 176 (532)
+..++..+..+...|
T Consensus 178 ~~~~i~~~~~~~~lp 192 (413)
T PRK15403 178 VMGLIAFVGLLLAMP 192 (413)
T ss_pred HHHHHHHHHHHHhCC
Confidence 776665554333333
No 39
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=5.4e-21 Score=198.14 Aligned_cols=140 Identities=15% Similarity=0.189 Sum_probs=122.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.++..++++++|+++||+ |||+++.++..+++++.+++++++ +
T Consensus 36 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~l~~~~~------------------------~ 90 (382)
T PRK10091 36 SIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGNAMFTLSS------------------------S 90 (382)
T ss_pred CHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHHHhC------------------------c
Confidence 567889999999999999999999999996 999999999999999999999985 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.+++.|+++|++.|...+....++.|+++++ ++++.++.+..+..+|..+||.+++++.+..+||+.|++.+
T Consensus 91 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~ 164 (382)
T PRK10091 91 YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG------KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIA 164 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH------HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHH
Confidence 788999999999999999888888889987642 23457888889999999999999999999999999999988
Q ss_pred HHHHHHHHHHH
Q 009538 162 FMMFLSCAMFF 172 (532)
Q Consensus 162 ~~~~l~~~~~~ 172 (532)
+..++..+..+
T Consensus 165 ~~~~~~~~~~~ 175 (382)
T PRK10091 165 VFNIAVLASIY 175 (382)
T ss_pred HHHHHHHHHHH
Confidence 76555544333
No 40
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.89 E-value=2.9e-21 Score=202.24 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=125.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+.+++.++|.+++.+++++.|+++||+ |||+++..+.++++++++++++++
T Consensus 40 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~------------------------ 94 (412)
T TIGR02332 40 LSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMFAT------------------------ 94 (412)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3678899999999999999999999999996 999999999999999999999985
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc------cccch
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS------DVSWA 154 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~------~~gw~ 154 (532)
++..++++|+++|++.|...|....++.|++|+ ++|++.+++++....+|.++++.+++++.+ ..|||
T Consensus 95 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~------~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr 168 (412)
T TIGR02332 95 GPESLYLLRILVGIAEAGFLPGILLYLTFWFPA------YFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQ 168 (412)
T ss_pred CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchh
Confidence 567899999999999999999999999999874 234568999999999999999999998763 46999
Q ss_pred hhhHHHHHHHHHHHHHHHhhcce
Q 009538 155 WGLGIPAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 155 ~~F~v~~~~~~l~~~~~~~~~~~ 177 (532)
+.|++.++..++..++.++..|+
T Consensus 169 ~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 169 WLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhccCC
Confidence 99999877655544444444343
No 41
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.2e-21 Score=205.27 Aligned_cols=375 Identities=15% Similarity=0.149 Sum_probs=236.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|.++.+++.+++..|+.++++++|+++||| |-|+++..+.++.++++++...+.. .
T Consensus 70 ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~----------------------~ 126 (466)
T KOG2532|consen 70 WSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS----------------------I 126 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH----------------------h
Confidence 4678999999999999999999999999996 9999999999999999999999874 2
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-ccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD-VSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~-~gw~~~F~v 159 (532)
+++.+++.|++||++.|...|+...+.+.|.|+. +|++..++.+.+..+|.+++..++|++.+. +||+++|++
T Consensus 127 ~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~------Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~ 200 (466)
T KOG2532|consen 127 GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPN------ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYV 200 (466)
T ss_pred cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHH
Confidence 3457899999999999999999999999999863 335689999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhh
Q 009538 160 PAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKA 239 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (532)
.++..++..++++....+.+.+.|.-++.+ . ....+++..
T Consensus 201 ~g~~g~i~~~~w~~~~~d~P~~h~~is~~E--l---~~I~~~k~~----------------------------------- 240 (466)
T KOG2532|consen 201 FGIVGLIWFILWFLFYSDSPSKHPNISEKE--L---KYIEKGKSE----------------------------------- 240 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCHHH--H---HHHHhcccc-----------------------------------
Confidence 999888888877776655333222211111 0 000000000
Q ss_pred cccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhh
Q 009538 240 AIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASY 319 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
...+..+..||+... .+......++..+.....++...+++++++- .....+.. .++.+
T Consensus 241 --------~~~~~~~~vP~~~i~----ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~-~VL~f~v~--------~~G~~ 299 (466)
T KOG2532|consen 241 --------AHVKKKPPVPYKAIL----TSPPVWAIWISAFGGNWGFYLLLTYLPTYLK-EVLGFDVR--------ETGFL 299 (466)
T ss_pred --------cccCCCCCCCHHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHhCCChh--------hhhHH
Confidence 000000234553211 1112222233334444445555545544432 22222211 23445
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHH--HHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRM--AIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.++..+...+...+.+.+ .||+..|.-.....+++ .++....++.++..+...
T Consensus 300 salP~l~~~~~k~~~g~l----sD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~--------------------- 354 (466)
T KOG2532|consen 300 SALPFLAMAIVKFVAGQL----SDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS--------------------- 354 (466)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC---------------------
Confidence 555555544444443333 33333321112223344 334444444444444431
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
..+.+..++.+.+.-...++..++.+.-..+.+|+. .+..+|+.+....+++.++|.+.+.+.. .+
T Consensus 355 -~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~-a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~----------- 420 (466)
T KOG2532|consen 355 -DEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH-AGFVMGIINFVGALAGFIAPLLVGIIVT-DN----------- 420 (466)
T ss_pred -CCcchHHHHHHHHHHHHcccchhhhHhhhhhccchH-HHHHHHHHHHHHHHHHHHHHHheeeEeC-CC-----------
Confidence 112222222222222222233334343334447755 7999999999999999999999988763 10
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCA 505 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~ 505 (532)
+.+....+|++.+++.+++.+++.++.
T Consensus 421 -t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 421 -TREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred -CHHHHHHHHHHHHHHHHHhchheeEee
Confidence 223457799999999998888777764
No 42
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.89 E-value=5.5e-21 Score=199.29 Aligned_cols=137 Identities=12% Similarity=0.152 Sum_probs=119.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|..+.+.+.+.+.+...+..+++|+++||+ |||+++.++.++..++.+++.+++ +
T Consensus 44 s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~------------------------~ 98 (400)
T PRK11646 44 AAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFATMAIAH------------------------E 98 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHHHHHHhc------------------------c
Confidence 567888999999999999999999999996 999999999999999999998874 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.+++.|+++|++.+...|...+++.|.+|+ ++|++++++.+...++|..+||.+++++. ++|||+.|++.+
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~ 171 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTALVIKLIRP------HQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGA 171 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 77899999999999999999999999998874 23356899999999999999999999998 789999999987
Q ss_pred HHHHHHHHH
Q 009538 162 FMMFLSCAM 170 (532)
Q Consensus 162 ~~~~l~~~~ 170 (532)
+..++..+.
T Consensus 172 ~~~~~~~i~ 180 (400)
T PRK11646 172 VLFVLAAAF 180 (400)
T ss_pred HHHHHHHHH
Confidence 765555443
No 43
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.89 E-value=1.2e-20 Score=198.26 Aligned_cols=131 Identities=14% Similarity=0.171 Sum_probs=118.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|+.+.+++.+++.++..++++++|+++||+ |||+++.++.++++++.+++++++ +
T Consensus 51 s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------------------------~ 105 (426)
T PRK12307 51 TDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVGTGLSGLAS------------------------G 105 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHh------------------------H
Confidence 577889999999999999999999999996 999999999999999999999985 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.++++|+++|+|.|...+....++.|++|++ +|+++.+++..+..+|.++++.+.+.+.+..|||+.|++.+
T Consensus 106 ~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 106 VIMLTLSRFIVGMGMAGEYACASTYAVESWPKH------LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh------HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 778999999999999999999999999998752 23557899999999999999999999999999999999865
Q ss_pred HH
Q 009538 162 FM 163 (532)
Q Consensus 162 ~~ 163 (532)
+.
T Consensus 180 ~~ 181 (426)
T PRK12307 180 LP 181 (426)
T ss_pred HH
Confidence 43
No 44
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.88 E-value=9.7e-21 Score=197.54 Aligned_cols=339 Identities=12% Similarity=0.048 Sum_probs=213.5
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 6 ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 6 ~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.+++++++ +++.+
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~ 110 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALGMGIVMVLMGLAQ------------------------NIWQF 110 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHHHHHHHHHHHHHh------------------------hHHHH
Confidence 47888899999999999999999996 999999999999999998888764 57789
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHH
Q 009538 86 FTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMF 165 (532)
Q Consensus 86 ~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~ 165 (532)
++.|++.|++.+ ..|....++.|+++++ +|++..+++....++|.+++|.+++++.+.++||+.|++.++..+
T Consensus 111 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (408)
T PRK09874 111 LILRALLGLLGG-FVPNANALIATQVPRN------KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLF 183 (408)
T ss_pred HHHHHHHHHhhh-hHHhHHHHHHHhcCHh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999866 4577788888887642 234578889999999999999999999988999999999887666
Q ss_pred HHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcccCCc
Q 009538 166 LSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAIMTPE 245 (532)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (532)
+..+..+...++.+ ++.+++.....+ ...
T Consensus 184 ~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~---------------------------------------------- 212 (408)
T PRK09874 184 LCFLVTLFCIRENF--QPVSKKEMLHMR---EVV---------------------------------------------- 212 (408)
T ss_pred HHHHHHHHHhccCc--ccccchhhhHHH---HHH----------------------------------------------
Confidence 55554433333211 010000000000 000
Q ss_pred ccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccch---hhhhhhhccCcccCCccceeChhhhhhh
Q 009538 246 DQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQT---YVVFQALQSDRRVGNTHFKIPAASYAIF 322 (532)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
+..++.+.....+.. ...+........+ .+...........+ ...+.....
T Consensus 213 ------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~ 266 (408)
T PRK09874 213 ------------------TSLKNPKLVLSLFVT---TLIIQVATGSIAPILTLYVRELAGNVSNIA-----FISGMIASV 266 (408)
T ss_pred ------------------HhCcCCchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhccchHHH-----HHHHHHHHH
Confidence 000001111111111 1111111111111 11111000000000 001122222
Q ss_pred hhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchH
Q 009538 323 SMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSG 402 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (532)
..++.++..+..+++ .+|+++| +.+..+..+..++++..... .+.
T Consensus 267 ~~l~~~~~~~~~g~l----~dr~g~~-------~~~~~~~~~~~~~~~~~~~~------------------------~~~ 311 (408)
T PRK09874 267 PGVAALLSAPRLGKL----GDRIGPE-------KILITALIFSVLLLIPMSFV------------------------QTP 311 (408)
T ss_pred HHHHHHHHHHHHHHH----Hhccccc-------hhHHHHHHHHHHHHHHHHHh------------------------ccH
Confidence 333444445554333 5555444 45555655555554443332 134
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchh
Q 009538 403 LWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGR 482 (532)
Q Consensus 403 ~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (532)
+...+..++.+++.+...+...++..+..|++.+|+.+++++..+.+|..+++.+.+.+.+.. +
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~----------------g 375 (408)
T PRK09874 312 LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY----------------G 375 (408)
T ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc----------------c
Confidence 555566677888888888888889999999999999999999999999999999999887643 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 009538 483 LDYFYYLVAALGLLNFGFFLLC 504 (532)
Q Consensus 483 ~~~~~~~~~~~~vv~~~~~~~~ 504 (532)
+...|++.+++.+++.+..+..
T Consensus 376 ~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 376 FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 5667887777777776665544
No 45
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.88 E-value=4.4e-20 Score=190.76 Aligned_cols=144 Identities=17% Similarity=0.152 Sum_probs=125.5
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.++..++++++|+++||+ |||+++..+.++..++.+++++++
T Consensus 37 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 91 (385)
T TIGR00710 37 TPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFALSSLGLALSN------------------------ 91 (385)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHc------------------------
Confidence 3678899999999999999999999999996 999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.++++|+++|++.+...+...+++.|++|+ ++|++.++..+...++|..+||.+++++.++++||+.|++.
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 165 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPG------EELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFL 165 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 577899999999999999999999999999874 23456899999999999999999999999989999999987
Q ss_pred HHHHHHHHHHHHhhc
Q 009538 161 AFMMFLSCAMFFLGS 175 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~ 175 (532)
++..++..+..+...
T Consensus 166 ~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 166 SLAGILLSALIFFIL 180 (385)
T ss_pred HHHHHHHHHHHHHhC
Confidence 776555555444433
No 46
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.88 E-value=1.4e-20 Score=191.03 Aligned_cols=317 Identities=21% Similarity=0.287 Sum_probs=229.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.++..++.++.|+++||+ ||||.+.++..+..++.+++.++. +
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------~ 86 (352)
T cd06174 32 SASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLLAFAS------------------------S 86 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHhc------------------------c
Confidence 567889999999999999999999999996 999999999999999999998874 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.++++|++.|++.+...+...+++.|++|++ +|++.++..+...++|..+||.+++.+.+..+||+.|++.+
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK------ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCcc------chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 778999999999999999999999999998752 23458999999999999999999999999899999999988
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcc
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAI 241 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (532)
+..++..+......|+ ..
T Consensus 161 ~~~~~~~~~~~~~~~~-------------~~------------------------------------------------- 178 (352)
T cd06174 161 ILGLLLALLLLFLLRL-------------LL------------------------------------------------- 178 (352)
T ss_pred HHHHHHHHHHHHHHHH-------------HH-------------------------------------------------
Confidence 7766655543322100 00
Q ss_pred cCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhhh
Q 009538 242 MTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYAI 321 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
. ..+..+.............+. +.....+.+. ...+....
T Consensus 179 ----------------------------~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~ 218 (352)
T cd06174 179 ----------------------------L---LALAFFLLSFGYYGLLTYLPL-YLQEVLGLSA--------AEAGLLLS 218 (352)
T ss_pred ----------------------------H---HHHHHHHHHhHHHHHHHHHHH-HHHHhcCCCH--------HHHHHHHH
Confidence 0 000011111111111111111 1111101111 11233444
Q ss_pred hhhhhhHhHHhhhccchhhhccccccCCCCCChhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccc
Q 009538 322 FSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQ-RMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSL 400 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (532)
...++..++.++..++ .+|.++| + .+..+..+..++.+..... .
T Consensus 219 ~~~~~~~i~~~~~~~~----~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~------------------------~ 263 (352)
T cd06174 219 LFGLGGILGALLGGLL----SDRLGRR-------RLLLLIGLLLAALGLLLLALA------------------------P 263 (352)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHhh-------hHHHHHHHHHHHHHHHHHHHh------------------------c
Confidence 5555556666664443 6665554 4 6677777777777666653 2
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.+......++.+++.+...+...++..|..|++.|++.+|+.+..+.++..+++.+.+.+.+..
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~--------------- 328 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG--------------- 328 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------------
Confidence 35667778889999999999999999999999999999999999999999999999999987532
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 009538 481 GRLDYFYYLVAALGLLNFGFFL 502 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~ 502 (532)
++...++..+++.+++.+..+
T Consensus 329 -~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 329 -GYGGVFLILAALALLAALLLL 349 (352)
T ss_pred -CcchHHHHHHHHHHHHHHHhe
Confidence 234567777777766665543
No 47
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.88 E-value=2.2e-20 Score=192.35 Aligned_cols=147 Identities=14% Similarity=0.079 Sum_probs=114.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHH-HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGF-ASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~-~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
|+.+.+++.+.+.+...+.+++.|+++||+ ||||.++. +..+..++.+++++++
T Consensus 31 s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~------------------------ 85 (375)
T TIGR00899 31 RPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFAWNR------------------------ 85 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHhcc------------------------
Confidence 577889999999999999999999999996 99987654 5556667777887764
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.+++.|+++|.+.+...|....+..|+.++ ++| .+....+......++|.++||.+++++.+++|||+.|++.
T Consensus 86 ~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 86 NYFLLLVLGVLLSSFASTANPQLFALAREHADR---TGR-EAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTA 161 (375)
T ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhh---cch-hhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHH
Confidence 567788899999988888888888888886543 221 2222356777788999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhcce
Q 009538 161 AFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~ 177 (532)
++..++..+..+...|+
T Consensus 162 ~~~~~~~~~~~~~~~~~ 178 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPS 178 (375)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 87665555444433343
No 48
>PRK09952 shikimate transporter; Provisional
Probab=99.88 E-value=2.4e-20 Score=196.86 Aligned_cols=129 Identities=11% Similarity=0.145 Sum_probs=100.5
Q ss_pred HHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009538 14 SGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMV 93 (532)
Q Consensus 14 ~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 93 (532)
.++..+++++.|+++||+ |||++++++.++++++++++++++++.+.. ..+...+++.|+++|
T Consensus 74 ~~~~~~g~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~l~~~R~l~G 136 (438)
T PRK09952 74 FLFRPLGGVVFGHFGDRL-GRKRMLMLTVWMMGIATALIGLLPSFSTIG----------------WWAPVLLVTLRAIQG 136 (438)
T ss_pred HHHHhhHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHhcCCcHHHHH----------------HHHHHHHHHHHHHHH
Confidence 345668889999999996 999999999999999999999986432100 011236889999999
Q ss_pred HhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc--------ccccchhhhHHHHHHHH
Q 009538 94 IGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ--------SDVSWAWGLGIPAFMMF 165 (532)
Q Consensus 94 ~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~--------~~~gw~~~F~v~~~~~~ 165 (532)
++.|...|....++.|++|+++ |+...+....+..+|.+++..+..++. +++|||++|++.++..+
T Consensus 137 ~~~g~~~~~~~~~~~e~~p~~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 137 FAVGGEWGGAALLAVESAPKNK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred hhhcccHHHHHHHHHHhCCCCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 9999999999999999987522 245677777888888888876666553 35899999998776543
No 49
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.88 E-value=4e-21 Score=195.64 Aligned_cols=138 Identities=22% Similarity=0.347 Sum_probs=122.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|+.+.+++.+++.++..++++++|+++||+ ||||++.++.++.+++.+++.+++ +
T Consensus 30 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------------------------~ 84 (352)
T PF07690_consen 30 SPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAFAS------------------------N 84 (352)
T ss_dssp TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHHC------------------------C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhhhh------------------------h
Confidence 678899999999999999999999999996 999999999999999977777753 4
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
.+.++++|+++|++.+...|....++.|++|++ +|++.++......++|.++||.+++++.++++||+.|++.+
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~ 158 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPASNALIADWFPPE------ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISA 158 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHH
T ss_pred HHHHhhhccccccccccccccccccccccchhh------hhhhccccccchhhhhhhcccchhhhhhhcccccccccccc
Confidence 558999999999999999999999999998752 33568999999999999999999999999999999999998
Q ss_pred HHHHHHHHH
Q 009538 162 FMMFLSCAM 170 (532)
Q Consensus 162 ~~~~l~~~~ 170 (532)
+..++..++
T Consensus 159 ~~~~~~~il 167 (352)
T PF07690_consen 159 ILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHH
T ss_pred chhhhhhhh
Confidence 887777654
No 50
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.88 E-value=1.5e-20 Score=199.17 Aligned_cols=149 Identities=15% Similarity=0.050 Sum_probs=117.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+.+++.+.+.++..++++++|+++||+ |||++++++.++++++.++++++.... .
T Consensus 60 ~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~~--------------------~ 118 (452)
T PRK11273 60 FSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWAT--------------------S 118 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhccc--------------------c
Confidence 4678899999999999999999999999996 999999999999999999888863111 2
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHH-HHHHHhhhhccccccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAM-MISLTVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~-~~g~~~~g~i~~~~gw~~~F~v 159 (532)
++..+++.|+++|++.|...|.....+.|++|+ +.|++.+++++.+.++|. +.+|+++..+....+||+.|++
T Consensus 119 ~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i 192 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ------KERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYM 192 (452)
T ss_pred cHHHHHHHHHHHHHHHhccchHHHHHHHHhCCh------HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHH
Confidence 577889999999999999989888889998874 223568899889999886 4566554444344699999999
Q ss_pred HHHHHHHHHHHHHhhcc
Q 009538 160 PAFMMFLSCAMFFLGSR 176 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~~~ 176 (532)
.++..++..++.+...|
T Consensus 193 ~~~~~~~~~~l~~~~~~ 209 (452)
T PRK11273 193 PAFAAILVALFAFAMMR 209 (452)
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 87765554443333333
No 51
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.87 E-value=5.1e-20 Score=191.58 Aligned_cols=131 Identities=14% Similarity=0.169 Sum_probs=112.8
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.|.+.+.++.+++|+++||+ ||||+++++..++++++++++++. +
T Consensus 36 s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~~~~~~~------------------------~ 90 (393)
T PRK11195 36 PDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCLLMLFGI------------------------H 90 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHHHHHHHH------------------------H
Confidence 456789999999999999999999999996 999999999999999999887764 2
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
.++.|+++|++.|...|+..+++.|++|+ ++|+++.++.....++|.++||.++|++.+. .|+..|.+.+
T Consensus 91 ---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~------~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~ 160 (393)
T PRK11195 91 ---PLLAYGLVGIGAAAYSPAKYGILTELLPG------EKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCA 160 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 37899999999999999999999999874 2346789999999999999999999999874 4777777766
Q ss_pred HHHHHH
Q 009538 162 FMMFLS 167 (532)
Q Consensus 162 ~~~~l~ 167 (532)
...++.
T Consensus 161 ~~~~~~ 166 (393)
T PRK11195 161 LIYLLA 166 (393)
T ss_pred HHHHHH
Confidence 554443
No 52
>PRK10054 putative transporter; Provisional
Probab=99.87 E-value=2.4e-20 Score=194.21 Aligned_cols=139 Identities=12% Similarity=0.091 Sum_probs=118.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.+.+.+++++.|+++||+ |||++++++.++..++.++.++++
T Consensus 40 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~~~~~~~~~~~------------------------ 94 (395)
T PRK10054 40 LSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFASGFIAIPLVN------------------------ 94 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHh------------------------
Confidence 3678899999999999999999999999995 999999999999999999988875
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.+++.|.+.|.+.+...|+..++..|.+++ ++|++.+++.+...++|.++||.+++++.. .+|+++|++.
T Consensus 95 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~ 167 (395)
T PRK10054 95 NVTLVVLFFALINCAYSVFSTVLKAWFADNLSS------TSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLA 167 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHH
Confidence 466788889999988888888899999998764 234568999999999999999999999875 7999999988
Q ss_pred HHHHHHHHHHH
Q 009538 161 AFMMFLSCAMF 171 (532)
Q Consensus 161 ~~~~~l~~~~~ 171 (532)
++..++..+..
T Consensus 168 ~~~~~i~~i~~ 178 (395)
T PRK10054 168 AICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHH
Confidence 77666654443
No 53
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.87 E-value=2.1e-20 Score=194.20 Aligned_cols=136 Identities=16% Similarity=0.188 Sum_probs=119.3
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.+++++++
T Consensus 44 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 98 (405)
T TIGR00891 44 LTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFSAGTLACGFAP------------------------ 98 (405)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3678899999999999999999999999996 999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc--chhhhH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS--WAWGLG 158 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g--w~~~F~ 158 (532)
++..++++|+++|++.+...+...+++.|++|++ +|+++++++.....+|..+++.+++.+.+..+ ||+.|+
T Consensus 99 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~ 172 (405)
T TIGR00891 99 GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH------LRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFF 172 (405)
T ss_pred cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHH
Confidence 5778999999999999999999999999998752 23457999999999999999999999887666 999999
Q ss_pred HHHHHHHHH
Q 009538 159 IPAFMMFLS 167 (532)
Q Consensus 159 v~~~~~~l~ 167 (532)
+.++..++.
T Consensus 173 ~~~~~~~~~ 181 (405)
T TIGR00891 173 ISILPIIFA 181 (405)
T ss_pred HHHHHHHHH
Confidence 866554444
No 54
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.87 E-value=2.5e-20 Score=198.70 Aligned_cols=141 Identities=9% Similarity=0.019 Sum_probs=110.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++..+.+++.+.+.+++.++++++|+++||+ |||+++..+.++++++.+++++++
T Consensus 68 ls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~------------------------ 122 (476)
T PLN00028 68 LTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAPAVFCMSLVS------------------------ 122 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3567889999999999999999999999996 999999999999999999888875
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc---------cc
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS---------DV 151 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~---------~~ 151 (532)
++..+++.|+++|++.+...+ ...+++|++|++ .|++++++.....++|..+++.+.+.+.. ..
T Consensus 123 s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~------~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 195 (476)
T PLN00028 123 SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGK------IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFT 195 (476)
T ss_pred CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChh------heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Confidence 466788999999999987654 556789998742 23457888777777787777666554421 25
Q ss_pred cchhhhHHHHHHHHHHHHHHHh
Q 009538 152 SWAWGLGIPAFMMFLSCAMFFL 173 (532)
Q Consensus 152 gw~~~F~v~~~~~~l~~~~~~~ 173 (532)
|||+.|++.+++.++..+..+.
T Consensus 196 gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 196 AWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 8999999988766555444333
No 55
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.86 E-value=1.5e-20 Score=193.04 Aligned_cols=142 Identities=14% Similarity=0.145 Sum_probs=122.3
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+++.++..++.+++|+++||+ |||+++.++..+.+++.+++++++
T Consensus 27 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 81 (379)
T TIGR00881 27 LSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------------------ 81 (379)
T ss_pred CCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------------------
Confidence 3678899999999999999999999999996 999999999999999999999885
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHH-HhhhhccccccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISL-TVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~-~~~g~i~~~~gw~~~F~v 159 (532)
+++.+++.|+++|++.+...|...+++.|++|++ +|++.++++....++|..++| .+++.+.+..+||+.|++
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS------ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIV 155 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh------hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHH
Confidence 5778999999999999999999999999998752 234578889999999999999 577778788999999998
Q ss_pred HHHHHHHHHHHHHh
Q 009538 160 PAFMMFLSCAMFFL 173 (532)
Q Consensus 160 ~~~~~~l~~~~~~~ 173 (532)
.++..++..++.+.
T Consensus 156 ~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 156 PGIIAIIVSLICFL 169 (379)
T ss_pred HHHHHHHHHHHHhe
Confidence 77765554444433
No 56
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.86 E-value=3.3e-19 Score=184.03 Aligned_cols=142 Identities=14% Similarity=0.151 Sum_probs=124.1
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.++..++.+++|+++||+ |||+++..+.++.+++.+++.+++
T Consensus 23 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~------------------------ 77 (377)
T PRK11102 23 VSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ------------------------ 77 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc------------------------
Confidence 3678899999999999999999999999996 999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.+++.|+++|++.+...+...+++.|++++ ++|++.+++.+...++|..++|.+++++.++.+||+.|++.
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPK------EEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 577899999999999999999999999998864 23456899999999999999999999999989999999987
Q ss_pred HHHHHHHHHHHHh
Q 009538 161 AFMMFLSCAMFFL 173 (532)
Q Consensus 161 ~~~~~l~~~~~~~ 173 (532)
++..++..+..+.
T Consensus 152 ~~~~~~~~~~~~~ 164 (377)
T PRK11102 152 ALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHH
Confidence 7766555444333
No 57
>TIGR00895 2A0115 benzoate transport.
Probab=99.86 E-value=1.3e-19 Score=187.44 Aligned_cols=141 Identities=13% Similarity=0.104 Sum_probs=121.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+++.++. +
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 104 (398)
T TIGR00895 50 DPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVFTLLCALAT------------------------N 104 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHcc------------------------c
Confidence 567889999999999999999999999996 999999999999999999888774 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.+++.|++.|++.+...+...+++.|++|+ +.|++.++++....++|..+|+.+++++.+..||++.|++.+
T Consensus 105 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~ 178 (398)
T TIGR00895 105 VTQLLILRFLAGLGLGGLMPNLNALVSEYAPK------RFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGG 178 (398)
T ss_pred hHHHHHHHHHHhcccccchhhHHHHHHHHcCH------HhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhh
Confidence 67899999999999999999999999999864 233457999999999999999999999999999999999886
Q ss_pred HHHHHHHHHHHh
Q 009538 162 FMMFLSCAMFFL 173 (532)
Q Consensus 162 ~~~~l~~~~~~~ 173 (532)
+..++..++.+.
T Consensus 179 ~~~~~~~~~~~~ 190 (398)
T TIGR00895 179 IAPLLLLLLLMR 190 (398)
T ss_pred hHHHHHHHHHHH
Confidence 544444333333
No 58
>PRK03699 putative transporter; Provisional
Probab=99.86 E-value=2.6e-19 Score=186.40 Aligned_cols=138 Identities=13% Similarity=0.157 Sum_probs=116.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|..+.+++.+.+.+++.++++++|+++||+ ||||++..+.+++.++.+++++++
T Consensus 39 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~l~~~~~------------------------ 93 (394)
T PRK03699 39 LPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALMILAVAGLMFSH------------------------ 93 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHcc------------------------
Confidence 3678889999999999999999999999996 999999999999999999999874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc-ccccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ-SDVSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~-~~~gw~~~F~v 159 (532)
++..+++.|+++|++.|...+....++.|++|++ +|+..++..+...++|..++|.+.+++. +..|||+.|.+
T Consensus 94 ~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~ 167 (394)
T PRK03699 94 SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK------QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYAC 167 (394)
T ss_pred hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 5678999999999999999999999999998641 2245677777788899999999888764 46899999998
Q ss_pred HHHHHHHHHH
Q 009538 160 PAFMMFLSCA 169 (532)
Q Consensus 160 ~~~~~~l~~~ 169 (532)
.++..++..+
T Consensus 168 ~~~~~~~~~~ 177 (394)
T PRK03699 168 IGLVYVAIFI 177 (394)
T ss_pred HHHHHHHHHH
Confidence 7765554433
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.86 E-value=9.1e-20 Score=192.49 Aligned_cols=150 Identities=14% Similarity=0.041 Sum_probs=121.1
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+++.+++.+++.++..+++++.|+++||+ |||+.+.++.++++++.+++++.++.. .
T Consensus 58 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~ 116 (438)
T TIGR00712 58 FSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT--------------------S 116 (438)
T ss_pred CCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc--------------------c
Confidence 4678899999999999999999999999996 999999999999999998877653211 2
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhh-ccccccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVY-VQSDVSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~-i~~~~gw~~~F~v 159 (532)
++..+++.|++.|++.|...+....++.|++|+++ |++++++++...++|..+++.+.+. +..+.+||+.|++
T Consensus 117 ~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~ 190 (438)
T TIGR00712 117 SIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYF 190 (438)
T ss_pred hHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHH
Confidence 56778899999999999999989999999987532 3458999999999999999887665 4445799999999
Q ss_pred HHHHHHHHHHHHHhhcce
Q 009538 160 PAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~ 177 (532)
.++..++..+..+...|+
T Consensus 191 ~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 191 PAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 887666554444433333
No 60
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.86 E-value=1.6e-19 Score=193.64 Aligned_cols=132 Identities=17% Similarity=0.179 Sum_probs=118.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.++..++.+++|+++||+ |||++++++.++++++.++++++.
T Consensus 52 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 106 (496)
T PRK03893 52 LTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVLFSVGTLACGFAP------------------------ 106 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh------------------------
Confidence 3577889999999999999999999999996 999999999999999999999874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.++++|+++|++.+...+....++.|.+++ +.|++.++.+....++|..++|.+++++.++++||+.|++.
T Consensus 107 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~ 180 (496)
T PRK03893 107 GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK------HLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG 180 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 577899999999999999999999999999874 23456789999999999999999999999999999999875
Q ss_pred HHH
Q 009538 161 AFM 163 (532)
Q Consensus 161 ~~~ 163 (532)
++.
T Consensus 181 ~~~ 183 (496)
T PRK03893 181 ILP 183 (496)
T ss_pred HHH
Confidence 543
No 61
>PRK11043 putative transporter; Provisional
Probab=99.86 E-value=4e-19 Score=185.22 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=119.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+.+++.+++.++..++++++|+++||+ |||+++..+.++..++.+++++++
T Consensus 38 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------------ 92 (401)
T PRK11043 38 TSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE------------------------ 92 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3678899999999999999999999999996 999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+++.+++.|+++|+|.+...+...+++.|+++++ ++.+.++......++|..++|.+++++.++.|||+.|++.
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~ 166 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ------KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATL 166 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 5778999999999999888888888999988742 2234677777788999999999999999999999999987
Q ss_pred HHHHHHHHHHH
Q 009538 161 AFMMFLSCAMF 171 (532)
Q Consensus 161 ~~~~~l~~~~~ 171 (532)
++..++..+..
T Consensus 167 ~~~~~~~~~~~ 177 (401)
T PRK11043 167 FAITLLLILPT 177 (401)
T ss_pred HHHHHHHHHHH
Confidence 77655554433
No 62
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=2.9e-19 Score=188.38 Aligned_cols=123 Identities=14% Similarity=0.136 Sum_probs=96.2
Q ss_pred HHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 009538 18 NFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAG 97 (532)
Q Consensus 18 ~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g 97 (532)
.+++++.|+++||+ ||||+++.+..++++++++++++++...+.. .....++++|+++|++.|
T Consensus 70 ~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~~~~l~~~R~l~G~~~g 132 (434)
T PRK15075 70 PLGAIVLGAYIDRV-GRRKGLIVTLSIMASGTLLIAFVPGYATIGL----------------AAPLLVLLGRLLQGFSAG 132 (434)
T ss_pred hhHHHHHHHHhhhh-chHHHHHHHHHHHHHHHHHHHhCCcHHHHHH----------------HHHHHHHHHHHHhhcccc
Confidence 36789999999996 9999999999999999999999854221000 001257899999999999
Q ss_pred ccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc--------ccccchhhhHHHHHH
Q 009538 98 GIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ--------SDVSWAWGLGIPAFM 163 (532)
Q Consensus 98 ~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~--------~~~gw~~~F~v~~~~ 163 (532)
...|....+++|++|+++ |++.++++....++|..+|+.+++.+. +.+|||++|++.++.
T Consensus 133 ~~~~~~~~~~~e~~p~~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 133 VELGGVSVYLAEIATPGR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred ccHHHHHHHHHhhCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHH
Confidence 999999999999987532 345788888888888888777777652 468999999986543
No 63
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.85 E-value=4e-19 Score=184.10 Aligned_cols=126 Identities=11% Similarity=0.048 Sum_probs=108.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.++..+++++.|+++||+ |||+++..+..+.+++.+++++++
T Consensus 38 ~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~~~~~~~~~~------------------------ 92 (381)
T PRK03633 38 LPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAAGCAGLGLMV------------------------ 92 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 3678999999999999999999999999996 999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhh
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F 157 (532)
+++.++++|+++|++.++..|...+.+.|..+++ +|++.++.++...++|..+||.+++++.+...|+..+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 163 (381)
T PRK03633 93 GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR------NRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW 163 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH
Confidence 5778999999999999999888888888876542 3456899999999999999999999987754444333
No 64
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.85 E-value=7.1e-19 Score=182.92 Aligned_cols=138 Identities=12% Similarity=0.091 Sum_probs=118.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.++..+++++.|+++||+ ||||++.++..+..++.+++.+++
T Consensus 40 ~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~------------------------ 94 (394)
T PRK11652 40 VREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFILGTLVALFAH------------------------ 94 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHc------------------------
Confidence 3678889999999999999999999999996 999999999999999999988874
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
++..+++.|+++|++.+...+....+..|.+++ ++++++.+.+..+..+|..+||.+++++.++.|||+.|++.
T Consensus 95 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~ 168 (394)
T PRK11652 95 SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG------TQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFL 168 (394)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHH
Confidence 577899999999999998888888888887753 22345788888899999999999999999889999999997
Q ss_pred HHHHHHHHH
Q 009538 161 AFMMFLSCA 169 (532)
Q Consensus 161 ~~~~~l~~~ 169 (532)
++..++..+
T Consensus 169 ~~~~~~~~~ 177 (394)
T PRK11652 169 LLLGAGVTF 177 (394)
T ss_pred HHHHHHHHH
Confidence 765554433
No 65
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.2e-19 Score=180.91 Aligned_cols=146 Identities=12% Similarity=0.101 Sum_probs=129.1
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|.+|.+.+-+.|++++.++-.+.|.++||. +.|+.+.+++++.++-.++.++++
T Consensus 61 lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~nil~Gfs~------------------------ 115 (448)
T COG2271 61 LSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVNILFGFSP------------------------ 115 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHHHHHhhhh------------------------
Confidence 4678999999999999999999999999996 999999999999999999999996
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhh--hhccccccchhhhH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVI--VYVQSDVSWAWGLG 158 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~--g~i~~~~gw~~~F~ 158 (532)
++..+.+.-++.|+..|.-.|.+...++.|||. ++|++..++|..+-|+|..+.|.+. +++..+.+||..|+
T Consensus 116 s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr------~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~ 189 (448)
T COG2271 116 SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR------KERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFY 189 (448)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc------cccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHH
Confidence 477899999999999999999999999999984 3346689999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhcce
Q 009538 159 IPAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 159 v~~~~~~l~~~~~~~~~~~ 177 (532)
+++++.++..+..+...++
T Consensus 190 ~pgiiaiival~~~~~~rd 208 (448)
T COG2271 190 FPGIIAIIVALILLFLLRD 208 (448)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 9998765555544444333
No 66
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=1.2e-18 Score=180.99 Aligned_cols=139 Identities=14% Similarity=0.100 Sum_probs=121.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|+.+.+++.+.+.++..+++++.|+++||+ |||+.++.+.+++.++.+++.+++ +
T Consensus 36 s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~~------------------------~ 90 (392)
T PRK10473 36 SEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLAE------------------------T 90 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHhC------------------------c
Confidence 567889999999999999999999999996 999999999999999999988874 4
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
+..++++|+++|++.+...+...+++.|.+++ ++|++.++..+...++|..++|.+++++.+..|||+.|++.+
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~------~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD------RRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHH
Confidence 66789999999999999999999999998864 234568899999999999999999999888899999999987
Q ss_pred HHHHHHHHHH
Q 009538 162 FMMFLSCAMF 171 (532)
Q Consensus 162 ~~~~l~~~~~ 171 (532)
+..++..+..
T Consensus 165 ~~~~i~~~~~ 174 (392)
T PRK10473 165 AMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHH
Confidence 7655554443
No 67
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.85 E-value=2.3e-18 Score=179.67 Aligned_cols=136 Identities=8% Similarity=0.126 Sum_probs=110.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.|.++..++++++|+++||+ ||||++..+..+++++.+++...... ..
T Consensus 45 ~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~~~--------------------~~ 103 (402)
T TIGR00897 45 LSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLWCVGHAAFIVFGLG--------------------HA 103 (402)
T ss_pred CCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhcc--------------------Cc
Confidence 3678899999999999999999999999996 99999999999999998766432100 02
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHH-HHHHHhhhhccccccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAM-MISLTVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~-~~g~~~~g~i~~~~gw~~~F~v 159 (532)
++..+++.|+++|+|.+...+.....+.+.+++ ++|+++.+.++...++|. .+||.+++++.+.+||+..++.
T Consensus 104 ~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~ 177 (402)
T TIGR00897 104 NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ------DNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWS 177 (402)
T ss_pred cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 567788999999999988888788888888764 234568999999999997 6899999999888997766665
Q ss_pred HHHH
Q 009538 160 PAFM 163 (532)
Q Consensus 160 ~~~~ 163 (532)
....
T Consensus 178 ~~~~ 181 (402)
T TIGR00897 178 ALAF 181 (402)
T ss_pred HHHH
Confidence 4443
No 68
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.4e-20 Score=189.19 Aligned_cols=146 Identities=18% Similarity=0.264 Sum_probs=131.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++...+.+.++|.+...++.|+.|+|+||| -||+++.+|..+|++..++++++.
T Consensus 65 i~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~~~~fs~------------------------ 119 (493)
T KOG1330|consen 65 ISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVFASGFSN------------------------ 119 (493)
T ss_pred CCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHHHHHHHH------------------------
Confidence 4678889999999999999999999999997 999999999999999999999984
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F~v 159 (532)
+++.+.+.|.+.|+|++.+.|+++++++|.||. .+|++.++++|+.+++|..+|.+.+..+....+ |||.|++
T Consensus 120 ~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~------~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~ 193 (493)
T KOG1330|consen 120 HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD------DKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRG 193 (493)
T ss_pred HHHHHHHHHHHhccchhhhcccchhHhhhcCcc------hhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEe
Confidence 699999999999999999999999999999975 344668999999999999999999999988766 9999999
Q ss_pred HHHHHHHHHHHHHhhcce
Q 009538 160 PAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~ 177 (532)
.+++.++..++.++..++
T Consensus 194 ~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 194 SAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred ehHHHHHHHHHHHhhccC
Confidence 998877776665555444
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.84 E-value=1.6e-18 Score=180.41 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=100.4
Q ss_pred chhhhHHHHHHHHH-HHHHHHhHHHHHhhccccchHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCc
Q 009538 2 KSITATTLINIFSG-TTNFATLLGAFLSDTYFGRYKTL-GFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTP 79 (532)
Q Consensus 2 ~~~~~~~i~~~~~~-~~~~~~l~~G~laD~~~Grr~~l-~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (532)
|+++.+++++.+.+ +..++++++|+ +||+ ||||.+ +.+.++.+++..+.++++
T Consensus 49 s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~----------------------- 103 (393)
T PRK15011 49 RPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVLACTLFAWNR----------------------- 103 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHHHHHHHHHhh-----------------------
Confidence 57788888877655 45556666666 9996 999875 455666667777777764
Q ss_pred hhHHHHHHH-HHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhH
Q 009538 80 WQLAFLFTG-LGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLG 158 (532)
Q Consensus 80 ~~~~~l~~~-r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~ 158 (532)
+++.+++. +++.|++ +...|....+..|+.++ ++| ..+...+....+.++|.++||.+++++.+++|||+.|+
T Consensus 104 -~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~ 177 (393)
T PRK15011 104 -NYFVLLFVGVFLSSFG-STANPQMFALAREHADK---TGR-EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYL 177 (393)
T ss_pred -HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhh---ccc-hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHH
Confidence 45555544 4555554 46678888888886442 221 22234467788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcce
Q 009538 159 IPAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 159 v~~~~~~l~~~~~~~~~~~ 177 (532)
+.++..++..+..+...|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 178 SAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HHHHHHHHHHHHHHhhcCc
Confidence 9887666555544443443
No 70
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.84 E-value=2.6e-18 Score=183.19 Aligned_cols=327 Identities=12% Similarity=0.063 Sum_probs=213.4
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
+...+.+..+-.+...+..+++|.++||+ .|||+++.+-++..+..++.++..... ..+.
T Consensus 44 ~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~~l~~~~-------------------~~~~ 103 (524)
T PF05977_consen 44 PLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLAVLAFFG-------------------LLSP 103 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHHHHHHhC-------------------cCCH
Confidence 45567777777888889999999999996 999999999999888777666543211 1357
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHH
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAF 162 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~ 162 (532)
+.+++.-++.|++.+...|+-++++.|..|+ +++..+.++.....|+.-++||.++|.+...+|-.+.|.++++
T Consensus 104 ~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~------~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inal 177 (524)
T PF05977_consen 104 WLLLILTFLLGIGSAFFNPAWQAIIPELVPK------EDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINAL 177 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------hhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999874 2345578999999999999999999999988999999999998
Q ss_pred HHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhccc
Q 009538 163 MMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAIM 242 (532)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (532)
..++....++..+++. +++..+.+++.+-+....+ +...
T Consensus 178 sfl~~i~~l~~~~~~~---~~~~~~~e~~~~~l~~G~r----------------------------------yv~~---- 216 (524)
T PF05977_consen 178 SFLISILALLRWKPPP---PPSSLPRERFFSALREGLR----------------------------------YVRS---- 216 (524)
T ss_pred HHHHHHHHHHHccccc---cccccchhhhhhhHHHHHH----------------------------------HHhc----
Confidence 7666554444333321 1111111111111111000 0000
Q ss_pred CCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhhhh
Q 009538 243 TPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYAIF 322 (532)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (532)
-+..+.++ +..+++..+.......+ +.+.....+.+. ...+.+...
T Consensus 217 -----------------------~~~l~~~l--~~~~~~~l~~~a~~aLl-Pl~a~~~l~~~a--------~~yGll~a~ 262 (524)
T PF05977_consen 217 -----------------------SPPLRSVL--LRSFLFNLFASAVWALL-PLFARDVLGGGA--------SGYGLLLAA 262 (524)
T ss_pred -----------------------chHHHHHH--HHHHHHHHhhhHHHHhh-hHHHHHHhCCcH--------HHHHHHHHH
Confidence 00111111 11111111111111111 111111111110 112344455
Q ss_pred hhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchH
Q 009538 323 SMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSG 402 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (532)
..++.+++..+..++ .+| .+..+.+..+.++.+++++.+++. .+.
T Consensus 263 ~gvGai~Gal~~~~l--------~~~---~~~~~lv~~~~~~~a~~~~~lal~------------------------~~~ 307 (524)
T PF05977_consen 263 FGVGAILGALLLPRL--------RRR---LSSRRLVLLASLLFALALLLLALS------------------------PSF 307 (524)
T ss_pred HHHHHHHHHHHHHHh--------hcc---cCcchhhHHHHHHHHHHHHHHhcc------------------------hHH
Confidence 556666665553332 222 233355666777777776666654 356
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 009538 403 LWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFT 465 (532)
Q Consensus 403 ~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~ 465 (532)
|...+.+++.|++........++.+.+..|+++||++++++.+....+..+|..+.|.+.+..
T Consensus 308 ~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 308 WLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666777888899999998889999999999999999999999999999999999999988754
No 71
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.83 E-value=1.3e-18 Score=179.57 Aligned_cols=128 Identities=13% Similarity=0.225 Sum_probs=101.1
Q ss_pred HHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 009538 18 NFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAG 97 (532)
Q Consensus 18 ~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g 97 (532)
.+++++.|+++||+ ||||++..+.+++.++.++++++++.++.. ......++++|+++|++.+
T Consensus 49 ~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~r~l~G~~~~ 111 (394)
T TIGR00883 49 PLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATIG----------------IWAPILLLLARLIQGFSLG 111 (394)
T ss_pred hhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhhH----------------HHHHHHHHHHHHHHHhhcc
Confidence 36889999999996 999999999999999999999986422100 0112468999999999999
Q ss_pred ccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc--------ccccchhhhHHHHHHHHHHH
Q 009538 98 GIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ--------SDVSWAWGLGIPAFMMFLSC 168 (532)
Q Consensus 98 ~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~--------~~~gw~~~F~v~~~~~~l~~ 168 (532)
...+..+.++.|+++++ +|++..+..+.+..+|.++++.+++.+. +.++||+.|++.++..++..
T Consensus 112 ~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 112 GEWGGAALYLAEYAPPG------KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred ccccccHHHhhhcCCcc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 99999999999998742 2345788888899999999988776553 35799999998776655443
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.83 E-value=1.4e-18 Score=204.78 Aligned_cols=119 Identities=9% Similarity=0.081 Sum_probs=101.7
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
...+++.++|.++..++++++|+++||+ |||++++++.++.+++.+++.++... .+++
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~ 104 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEVGLTLLIVLAYYL---------------------GWFW 104 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHHHHHHHHHHHHHH---------------------ccHH
Confidence 3468889999999999999999999996 99999999998877777766554311 2578
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD 150 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~ 150 (532)
.++++|+++|++.|...|+..+++.|+++++ +|+++++++..+.++|.++|+.+++++.+.
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKE------NLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCcc------cchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999998752 234589999999999999999999998765
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=99.83 E-value=1.5e-18 Score=182.87 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=99.1
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.|.+++.+++++.|++.||+ ||||++..+..+++++.+++..+..- +
T Consensus 58 ~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~~l~~~~~~a---------------------~ 115 (438)
T PRK10133 58 LTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWPAAEI---------------------M 115 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhc---------------------C
Confidence 4678999999999999999999999999996 99999999999999999887432110 2
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhc
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYV 147 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i 147 (532)
++..++++|+++|+|.|...+..+.++.|+. +++.+ ...++.++....+|..+||.+++.+
T Consensus 116 ~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~-~~~~~-----~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 116 NYTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSG-----HFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC-ChhhH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999864 32211 2247888888899999999887654
No 74
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=1.1e-18 Score=205.36 Aligned_cols=134 Identities=13% Similarity=0.047 Sum_probs=104.6
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHH--HH-HHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 5 TATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGF--AS-VASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 5 ~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~--~~-~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
..+++.++|.+.+.++++++|+++||+ |||+++.. .. ++..+..+++..+. +
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~~------------------------s 107 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHLN------------------------S 107 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------h
Confidence 457777889999999999999999996 99998643 22 22222222222222 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
++.++++|+++|++.+.+.|+..+++.|+++++ ++++++++..++.++|.++||.++|++....+|++.|++.+
T Consensus 108 ~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~------~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~ 181 (1140)
T PRK06814 108 VPLLFAALFLMGIHSALFGPIKYSILPDHLNKD------ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLM 181 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc------ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 788999999999999999999999999999853 23458999999999999999999999999999999995554
Q ss_pred HHHHHHHH
Q 009538 162 FMMFLSCA 169 (532)
Q Consensus 162 ~~~~l~~~ 169 (532)
+..+++++
T Consensus 182 ~~~~~~~~ 189 (1140)
T PRK06814 182 GIAVLGWL 189 (1140)
T ss_pred HHHHHHHH
Confidence 44444333
No 75
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.83 E-value=3.5e-24 Score=226.83 Aligned_cols=398 Identities=16% Similarity=0.150 Sum_probs=229.0
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
.+.+++.+++.++..++++++|+++||+ |||+++.++..+..+|+++.++++.. .++.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~ 103 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY---------------------NNFW 103 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc---------------------cccc
Confidence 4568899999999999999999999996 99999999999999999999998521 1567
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc---cccchhhhHHH
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS---DVSWAWGLGIP 160 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~---~~gw~~~F~v~ 160 (532)
.++++|+++|+|.|...+..+.|+.|..|++. |+...++.+....+|..++..++-.+.. ..+||+.+.+.
T Consensus 104 ~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~ 177 (451)
T PF00083_consen 104 MLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFG 177 (451)
T ss_pred cccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999876422 2447788888889999888776554433 34599999988
Q ss_pred HHHHHHHHH--HHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhh
Q 009538 161 AFMMFLSCA--MFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDK 238 (532)
Q Consensus 161 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (532)
.+..++..+ .++..+|++...+.+.++..+..+. . ++.+.++++.. +..
T Consensus 178 ~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~----~--~~~~~~~~~~~---~~~-------------------- 228 (451)
T PF00083_consen 178 AIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRK----L--RGKEIEDEEIE---EIK-------------------- 228 (451)
T ss_pred ccccccccccccccccccceeccccccccccccccc----c--ccccccccccc---ccc--------------------
Confidence 776543333 3444567776555444333222211 0 00000000000 000
Q ss_pred hcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHH-HHhcccchhhhhhhhccCcccCCccceeChh
Q 009538 239 AAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYY-VALVQQQTYVVFQALQSDRRVGNTHFKIPAA 317 (532)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (532)
++.++.......|+...+... .+++++..+.+........ ....++.+.........+. . ....
T Consensus 229 -------~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~-~------~~~~ 293 (451)
T PF00083_consen 229 -------AEKKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS-F------LATL 293 (451)
T ss_pred -------cccccccccceeeeecccccc-ccccccccccccccccccccccccccccccccccccccc-c------cccc
Confidence 000000000012221111100 1223222222211111111 0111111111111110000 0 1111
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHH-HHHHHHhhhhccCCCcccccCCc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISG-IIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
.....+.++.++.. .+.+|++|| +.+..+..+++++.+..+ .... .. +.
T Consensus 294 ~~~~~~~~~~~~~~--------~~~~~~GRr-------~~~i~~~~~~~~~~~~~~~~~~~-~~-----~~--------- 343 (451)
T PF00083_consen 294 ILGLVNFLGTLLAI--------FLIDRFGRR-------KLLIIGLLLMAICSLILGIIFFL-GV-----SS--------- 343 (451)
T ss_pred cccccccccccccc--------ccccccccc-------ccccccccccccccccccccccc-cc-----cc---------
Confidence 11122222222222 246666666 455566666666655554 1100 00 00
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPE 476 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~ 476 (532)
....+.+.++...+..........+..+.+..|.+|.+.|+++.++....+++++.+++.+.+.+.+..+
T Consensus 344 ~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~---------- 413 (451)
T PF00083_consen 344 SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG---------- 413 (451)
T ss_pred ccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------
Confidence 0011222222222222333435566777899999999999999999999999999999888877664321
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccc
Q 009538 477 DLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKGSGDGAPE 519 (532)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~ 519 (532)
....+..+++++++..++.+++.||+|+++.||.+++
T Consensus 414 ------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 414 ------GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ------ccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 1245677778888888888888999999998877654
No 76
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.83 E-value=5.1e-18 Score=175.91 Aligned_cols=332 Identities=12% Similarity=-0.040 Sum_probs=202.1
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHH----HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTL----GFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPG 76 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l----~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~ 76 (532)
+|..+.+++.+++.+...+++++.|+++||+ ||++.. ..+..++.+ +++..++
T Consensus 36 ~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~--~~~~~~~-------------------- 92 (382)
T TIGR00902 36 LGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAA--AFSAGAH-------------------- 92 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHH--HHHHhhh--------------------
Confidence 3678999999999999999999999999996 985433 232222222 2233332
Q ss_pred CCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhh
Q 009538 77 PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWG 156 (532)
Q Consensus 77 ~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~ 156 (532)
+++.+++.|+++|.+.+...|...++..|+ + + ++++.++......++|.++||.+++++.+++|||+.
T Consensus 93 ----~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-~------~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~ 160 (382)
T TIGR00902 93 ----NAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-K------QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNI 160 (382)
T ss_pred ----hHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-H------HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHH
Confidence 578899999999999999999988887653 2 1 123468888999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccch
Q 009538 157 LGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCL 236 (532)
Q Consensus 157 F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (532)
|++......+..+ .+...|+. +|++++.. + + . .
T Consensus 161 f~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~-----------------~-~-----------~---~----------- 193 (382)
T TIGR00902 161 LAILTAGLAFMLI-GFLIKPTI---PPKDAIPE-----------------D-E-----------S---Q----------- 193 (382)
T ss_pred HHHHHHHHHHHHH-HHHcCCCC---CCCccccc-----------------c-c-----------c---c-----------
Confidence 9886554322222 22222211 11100000 0 0 0 0
Q ss_pred hhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhh-HhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeC
Q 009538 237 DKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRV-IPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIP 315 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (532)
.++. ..+-.++ |++... +..++........+... +.+. +....+. ..
T Consensus 194 --------------------~~~~-~~~~l~~-~~~~~~l~~~~l~~~~~~~~~~~~-~~~l-~~~g~s~--------~~ 241 (382)
T TIGR00902 194 --------------------GDSA-FIALLKN-PMNLRFLAAVCLIQGAHAAYYGFS-AIYW-QAAGISA--------SA 241 (382)
T ss_pred --------------------cchh-HHHHHcC-hHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHCCCCH--------hH
Confidence 0000 0000111 222111 11111112222222111 1111 1111111 01
Q ss_pred hhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCC
Q 009538 316 AASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRG 395 (532)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (532)
.+.......++.++..++.++ +.+| +++.+.+.++.++..+........
T Consensus 242 ~g~l~~~~~~~~i~~~~~~~~--------l~~r---~g~~~~l~~~~~~~~~~~~~~~~~-------------------- 290 (382)
T TIGR00902 242 TGLLWGIGVLAEIIIFAFSNK--------LFQN---CSARDLLLISAIACVGRWAIIGAI-------------------- 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhHH--------HHhh---CCHHHHHHHHHHHHHHHHHHHHhH--------------------
Confidence 122233344444444444333 3343 444467788888888887766654
Q ss_pred ccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCCCCCCCC
Q 009538 396 AISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAF-VGFAISNYLNGFLISMVHRFTKGASTGDWL 474 (532)
Q Consensus 396 ~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~ 474 (532)
.+.+.++...++.++..+...+....++.+. |++.+++++++++ +...+|..+++.+.|.+.|..
T Consensus 291 ----~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~--------- 356 (382)
T TIGR00902 291 ----EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL--------- 356 (382)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 3567777778999999999999999999988 9999999999986 567899999999999998743
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHH
Q 009538 475 PEDLNKGRLDYFYYLVAALGLLNFG 499 (532)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~vv~~~ 499 (532)
+ ...|+..+++.+++.+
T Consensus 357 -------g-~~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 357 -------G-AGTFVFMAIIAAAAFF 373 (382)
T ss_pred -------c-HHHHHHHHHHHHHHHH
Confidence 1 2456666666665543
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.82 E-value=9.2e-18 Score=175.99 Aligned_cols=368 Identities=11% Similarity=0.029 Sum_probs=205.5
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCc
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGR-YKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTP 79 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Gr-r~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (532)
++..+.+++.+++.++..++++++|+++||+ || |+++.++.++.+++..++.+++
T Consensus 35 ~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~~~~~~----------------------- 90 (418)
T TIGR00889 35 FSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFFAAQVT----------------------- 90 (418)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhc-----------------------
Confidence 4678999999999999999999999999995 76 7788888888888888877764
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCC--CCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhh
Q 009538 80 WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNT--ESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 80 ~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~--~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F 157 (532)
++..+++.|++.|++.+...|...+...+...+.. ..+...+.+.++ .+|.++||.+++.+.....|++ |
T Consensus 91 -~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f 162 (418)
T TIGR00889 91 -TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-L 162 (418)
T ss_pred -CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHH-H
Confidence 46678889999999888887776665433221100 000001112333 4789999999998854334543 5
Q ss_pred HHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchh
Q 009538 158 GIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLD 237 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (532)
++.++..++..+. ....|+.++ +++++..+..+. .. ..
T Consensus 163 ~~~~~~~~~~~~~-~~~~~e~~~--~~~~~~~~~~~~-------~~-----------------------------~~--- 200 (418)
T TIGR00889 163 YITAGSSALLGVF-ALTLPDIPV--AKSTAKMSIKVM-------LG-----------------------------LD--- 200 (418)
T ss_pred HHHHHHHHHHHHH-HhcCCCCCC--CccccccCHHHH-------hh-----------------------------hh---
Confidence 5555544443332 222222110 000000000000 00 00
Q ss_pred hhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhH-hHHHHHHHHHHHhcccchhhhhhhhccCcccCCcccee-C
Q 009538 238 KAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVI-PIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKI-P 315 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (532)
.....++ +++...+ ..++............ ..+..... .+...+ .++.. .
T Consensus 201 ------------------------~~~~~k~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~-~~~~~~~ 252 (418)
T TIGR00889 201 ------------------------AFILFKN-KRMAIFFFFSMLLGAPLQITNIFG-NGFLHEFG-RNPEFA-DSFVVKN 252 (418)
T ss_pred ------------------------HHHHhcC-CCeeeHHHHHHHHHhHHHHHHHhH-HHHHHHhc-cccccc-chhhhhh
Confidence 0000001 1111111 1111111111111111 11111111 000000 00000 1
Q ss_pred hhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCC
Q 009538 316 AASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRG 395 (532)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (532)
.+.....+.+..++...+.+++ .+|+++| +.+..+.++.++++.......
T Consensus 253 ~g~~~~~~~i~~i~~~~~~g~l----~dr~g~r-------~~l~~~~~~~~v~~~l~~~~~------------------- 302 (418)
T TIGR00889 253 ASIWMSLSQFSEIFFILTIPFF----LKRFGIK-------KVMLLSLVAWALRFGFFAYGD------------------- 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHhCcH-------HHHHHHHHHHHHHHHHHHHcC-------------------
Confidence 1333344444444555554443 6665544 567777777766655554321
Q ss_pred ccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCCCCCCCC
Q 009538 396 AISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAF-VGFAISNYLNGFLISMVHRFTKGASTGDWL 474 (532)
Q Consensus 396 ~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~ 474 (532)
....+.+.++...++.+++++...+....++.|.+|++.|++++|+.+ ....+|..+++.+.|.+.|..+....
T Consensus 303 -~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~---- 377 (418)
T TIGR00889 303 -PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGT---- 377 (418)
T ss_pred -cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccC----
Confidence 001123445566788889988888888899999999999999999997 67889999999999999875421100
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009538 475 PEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYK 511 (532)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~ 511 (532)
.++...|...+++.+++.+..+++.++.+..
T Consensus 378 ------~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 378 ------FDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 1356778888888787777777776655433
No 78
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=8.6e-18 Score=172.28 Aligned_cols=132 Identities=16% Similarity=0.179 Sum_probs=111.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|..+.+++.+.+.++..++.++.|+++||+ ||||++.++.+..+++.+++ .++
T Consensus 32 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~------------------------ 85 (355)
T TIGR00896 32 MSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP------------------------ 85 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc------------------------
Confidence 3678899999999999999999999999996 99999999999998888777 442
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc--cchhhhH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV--SWAWGLG 158 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~--gw~~~F~ 158 (532)
+...+++.|+++|+|.+...+..+.++.|++++ +++++++.++...++|..+++.+++.+.++. +||+.|.
T Consensus 86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~ 158 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-------RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALA 158 (355)
T ss_pred cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 467889999999999999888888888887642 2345899999999999999999988887654 3999988
Q ss_pred HHHHHHH
Q 009538 159 IPAFMMF 165 (532)
Q Consensus 159 v~~~~~~ 165 (532)
+.++..+
T Consensus 159 ~~~~~~~ 165 (355)
T TIGR00896 159 WWALPAL 165 (355)
T ss_pred HHHHHHH
Confidence 7655433
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=2.6e-17 Score=176.03 Aligned_cols=125 Identities=13% Similarity=0.114 Sum_probs=102.5
Q ss_pred HHHhHHHHHhhccc-----cchHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009538 19 FATLLGAFLSDTYF-----GRYKT-LGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLM 92 (532)
Q Consensus 19 ~~~l~~G~laD~~~-----Grr~~-l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 92 (532)
++.+++|+++|| + ||||. ++++.+..+++.+++++.+. ..+++.+.+.++++
T Consensus 60 ~~~~l~gpl~Dr-~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~---------------------~~~l~~l~~~~~l~ 117 (491)
T PRK11010 60 VFKFLWSPLMDR-YTPPFLGRRRGWLLATQLLLLVAIAAMGFLEP---------------------GTQLRWLAALAVVI 117 (491)
T ss_pred HHHHHHHHHHHc-ccccCCCCchHHHHHHHHHHHHHHHHHHHcCC---------------------cchHHHHHHHHHHH
Confidence 689999999999 7 99986 66777777778788877531 13678899999999
Q ss_pred HHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-cccchhhhHHHHHHHHHHHHHH
Q 009538 93 VIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS-DVSWAWGLGIPAFMMFLSCAMF 171 (532)
Q Consensus 93 G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~-~~gw~~~F~v~~~~~~l~~~~~ 171 (532)
+++.+...+...++..|++|++ +|++..++...+.++|.++++.+++++.+ .+|||++|++.++..++..+..
T Consensus 118 ~~~~a~~~i~~~a~~~~~~~~~------~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 118 AFCSASQDIVFDAWKTDVLPAE------ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcChh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998742 23557888999999999999999999988 5799999999887665554433
No 80
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.81 E-value=7.7e-18 Score=176.79 Aligned_cols=356 Identities=10% Similarity=-0.009 Sum_probs=194.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHH---HhhcccCCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSL---TAAISKLHPPDCGNQDSGACPGP 77 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~---a~~~~~~~~~~~~~~~~~~~~~~ 77 (532)
+|..+.+.+.+++.++..++++++|+++||+ ||||+++++..+..++...... ++....
T Consensus 43 ~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 104 (420)
T PRK09528 43 LSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVLFGPFFIYVFAPLLQY----------------- 104 (420)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 3678899999999999999999999999996 9999999877776655442221 110000
Q ss_pred CchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhh
Q 009538 78 TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 78 ~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F 157 (532)
..+...++++++.|.+.....+....+..+ ++ ++++..++......++|..+||.+++++.+ .+|+++|
T Consensus 105 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f 173 (420)
T PRK09528 105 --NILLGAIVGGIYLGFGFLAGAGAIEAYIER-VS-------RRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINF 173 (420)
T ss_pred --HHHHHHHHHHHHhhhhhccchhhhhhHHHH-HH-------hhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhH
Confidence 011112333444443333333333332211 11 122446777778889999999999999875 6899999
Q ss_pred HHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchh
Q 009538 158 GIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLD 237 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (532)
++.++..++..+..+..+++.+++ ++.++ .++ ++ + ++..+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------~~~-----------~~---~-----~~~~~~~ 215 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPST-AKVAN------------------ALG-----------AN---A-----SAVSLKD 215 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccch-hhhcc------------------chh-----------cc---c-----ccccHHH
Confidence 988776665555444333321110 00000 000 00 0 0000000
Q ss_pred hhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHH-HHHHHHhcccchhhhhhhhccCcccCCccceeCh
Q 009538 238 KAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASA-IVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPA 316 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (532)
.. ...+ .+.+.......... ..+.....+.+.+...... +...+ . ...
T Consensus 216 ~~------------------------~~l~-~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~-~~~ 264 (420)
T PRK09528 216 AL------------------------ALLK-LPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFA--TPEQG---T-RVF 264 (420)
T ss_pred HH------------------------HHcc-CCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCcc---h-HHH
Confidence 00 0000 11111111111111 1111121122222211111 11111 0 011
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
+.....+.+...++.++.+++ .+|+++| +.+..+..+.+++.+..+..
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l----~dr~g~~-------~~~~~~~~l~~~~~~l~~~~--------------------- 312 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFI----INRIGAK-------NALLLAGTIMAVRIIGSGFA--------------------- 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHhCcc-------hhhHHHHHHHHHHHHHHHhc---------------------
Confidence 233333444444555554443 6666655 45666666666666655543
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHH-HHHHHHHHHHHHHHHHHHhcccccCCCCCCCCC
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSL-AFVGFAISNYLNGFLISMVHRFTKGASTGDWLP 475 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~ 475 (532)
.+.++++...++.+++.....+...+++.+..|++.+++..+. +++...+|+.+++.+.|++.|..
T Consensus 313 ---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~---------- 379 (420)
T PRK09528 313 ---TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI---------- 379 (420)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 2455666667777888777777778899999999999987765 67778899999999999998753
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009538 476 EDLNKGRLDYFYYLVAALGLLNFGFFLLCA 505 (532)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~ 505 (532)
++...|...+++.++..+..+...
T Consensus 380 ------G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 380 ------GFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHHh
Confidence 245577777777666655554443
No 81
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.79 E-value=3.1e-17 Score=171.08 Aligned_cols=147 Identities=11% Similarity=-0.015 Sum_probs=112.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|..|.+++.+++.+++.++.++.|++.||+ |.|+++.++.++.++.+++.+++..-+ ..
T Consensus 67 ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~~~~~~~a~~~~-------------------~~ 126 (462)
T PRK15034 67 FTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIPCVWLGIAVQNP-------------------NT 126 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHccc-------------------CC
Confidence 4678999999999999999999999999996 999999999999999999999862000 02
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc-----c------
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ-----S------ 149 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~-----~------ 149 (532)
++..+++.|++.|++ |...+.....++++||+ ++++++++++....|+|..+++.+.+.+. .
T Consensus 127 s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~------~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~ 199 (462)
T PRK15034 127 PFGIFIVIALLCGFA-GANFASSMGNISFFFPK------AKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNG 199 (462)
T ss_pred CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH------hHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 688999999999998 66778899999999974 23356888887777778776666554422 1
Q ss_pred -------cccchhhhHHHHHHHHHHHHHHHhh
Q 009538 150 -------DVSWAWGLGIPAFMMFLSCAMFFLG 174 (532)
Q Consensus 150 -------~~gw~~~F~v~~~~~~l~~~~~~~~ 174 (532)
..+||.++++-.++.++..+..++.
T Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 200 VPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3447777777666555554444443
No 82
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=3.4e-17 Score=176.85 Aligned_cols=148 Identities=16% Similarity=0.096 Sum_probs=122.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+........++|.+|..+++++.|+++|++ |||++++.++.+++++.++.+++. |
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~------------------------~ 170 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP------------------------N 170 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC------------------------c
Confidence 345678889999999999999999999995 999999999999999999999995 6
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
+..+++.|+++|++.+....++..+++|+++++ .|+.+.++ ......|..+++.+++++.. +|||.+++..
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~------~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~ 241 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK------QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS 241 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcc------hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 889999999999999999999999999998863 23446777 77888888889899999877 9999999977
Q ss_pred HHHHHHHHHHHh--hcceeeecCC
Q 009538 162 FMMFLSCAMFFL--GSRLYAKVKP 183 (532)
Q Consensus 162 ~~~~l~~~~~~~--~~~~~~~~~~ 183 (532)
+..++.++.+++ ..|++...+.
T Consensus 242 ~~~~~~~~~~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 242 IPSGLFLLLWFLPPESPRWLLSKG 265 (521)
T ss_pred HHHHHHHHHHHccCcChHHHHHcC
Confidence 765555444222 3445544333
No 83
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.79 E-value=6.1e-17 Score=167.83 Aligned_cols=132 Identities=13% Similarity=-0.037 Sum_probs=99.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccch----HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRY----KTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPG 76 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr----~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~ 76 (532)
.|..+.+++.+++.+...++++++|+++||+ ||| +.+.++..+. ....+..+
T Consensus 36 ~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~~~~~--------------------- 91 (382)
T PRK11128 36 YTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAFWFGA--------------------- 91 (382)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHHHHhc---------------------
Confidence 3678899999999999999999999999996 994 3333222221 11112222
Q ss_pred CCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhh
Q 009538 77 PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWG 156 (532)
Q Consensus 77 ~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~ 156 (532)
++++.+++.|+++|++.+...|...++..|+ .+ ++ ++.++......++|.++||.+++++.+++|||..
T Consensus 92 ---~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~--~~-----~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~ 160 (382)
T PRK11128 92 ---HSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QK--QI-----GLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAI 160 (382)
T ss_pred ---ccHHHHHHHHHHHHHHHcccccHHHHHHHHH-Hh--hc-----cCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHH
Confidence 2678889999999999999999888887775 21 12 2357777778899999999999999999999999
Q ss_pred hHHHHHHHHHH
Q 009538 157 LGIPAFMMFLS 167 (532)
Q Consensus 157 F~v~~~~~~l~ 167 (532)
|++.++..++.
T Consensus 161 f~~~~~~~~~~ 171 (382)
T PRK11128 161 LWILTAGVASM 171 (382)
T ss_pred HHHHHHHHHHH
Confidence 99877644433
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.79 E-value=3.2e-17 Score=171.36 Aligned_cols=140 Identities=14% Similarity=0.086 Sum_probs=116.2
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.+++.+++++.|++.||+ |||+++.++..+++++.+++..++.. +
T Consensus 35 ~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~~~~~---------------------~ 92 (410)
T TIGR00885 35 LTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWPAAEI---------------------M 92 (410)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHhh---------------------c
Confidence 3678899999999999999999999999996 99999999999999999887665321 2
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-----------
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS----------- 149 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~----------- 149 (532)
+++.++++|++.|+|.|...+..++++.+..|+++ +++..+..+...++|..+||.+++.+..
T Consensus 93 ~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 93 NYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 68889999999999999999999999999865432 2345888889999999999999887742
Q ss_pred ---------------cccchhhhHHHHHHHHHHH
Q 009538 150 ---------------DVSWAWGLGIPAFMMFLSC 168 (532)
Q Consensus 150 ---------------~~gw~~~F~v~~~~~~l~~ 168 (532)
..+||++|++.+++.++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1469999988776544443
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.78 E-value=2.7e-17 Score=173.34 Aligned_cols=331 Identities=12% Similarity=0.108 Sum_probs=197.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhcc---ccchH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTY---FGRYK-TLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPG 76 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~---~Grr~-~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~ 76 (532)
+++.+++++.++..+...+..|+.|+++||. +|||| .++++...++++.+++..+++.++
T Consensus 32 ~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~---------------- 95 (437)
T TIGR00792 32 LSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSA---------------- 95 (437)
T ss_pred CCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCc----------------
Confidence 3678889999999999999999999999972 38855 577788888888888877542111
Q ss_pred CCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc-------c
Q 009538 77 PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ-------S 149 (532)
Q Consensus 77 ~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~-------~ 149 (532)
...+..+++.+++.+++.++..+...++..|..++. ++|++..++.....++|..+++.+.+.+. +
T Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-----~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~ 168 (437)
T TIGR00792 96 --TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP-----RERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDD 168 (437)
T ss_pred --chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 124667888899999999988877888888876432 23345777777888888777766544433 3
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCC
Q 009538 150 DVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPH 229 (532)
Q Consensus 150 ~~gw~~~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (532)
..+||+.|.+.+++.++..+..+...++.++++++.++ +
T Consensus 169 ~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~-------------------------------------~---- 207 (437)
T TIGR00792 169 KFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE-------------------------------------K---- 207 (437)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc-------------------------------------c----
Confidence 56899999888776665554443333321100000000 0
Q ss_pred CCcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhH-HHHHHHHHHHhcccchhhhhhhhccCcccC
Q 009538 230 TGQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPI-WASAIVYYVALVQQQTYVVFQALQSDRRVG 308 (532)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (532)
+.+..+ ..+...+ .|.+...+.. ++....+. .......++... ..+
T Consensus 208 --~~~~~~-----------------------~~~~l~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~ 254 (437)
T TIGR00792 208 --KLSLKQ-----------------------IFKALFK-NDQLLILCLAYLFYNLAFN-IKNGVQVYYFTY------VLG 254 (437)
T ss_pred --CCCHHH-----------------------HHHHHhC-CHHHHHHHHHHHHHHHHHH-HHcchhheeEee------ecC
Confidence 000000 0000001 1111111111 11111111 111111111100 011
Q ss_pred CccceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Q 009538 309 NTHFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPV 388 (532)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (532)
.......+.....++.+++.++..++ .+|+++| +.+..+.++..++++.....
T Consensus 255 ---~~~~~~~~~~~~~i~~ii~~~~~~~l----~~r~g~~-------~~~~~~~~~~~~~~~~~~~~------------- 307 (437)
T TIGR00792 255 ---DPELFSYMGSIAIVAGLIGVLLFPRL----VKKFGRK-------ILFAGGILLMVLGYLIFFFA------------- 307 (437)
T ss_pred ---ChHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCcH-------HHHHHHHHHHHHHHHHHHHc-------------
Confidence 00011223334455556666664443 5665544 55667777766666554432
Q ss_pred cccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009538 389 GLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFP-------ENMRSIGGSLAFVGFAISNYLNGFLISMV 461 (532)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl~~~~~~ig~~l~~~~~~~~ 461 (532)
+.+.+..++..++.+++.+...+..+++..|..| ++.+|.+.|++++...+|..+++.+.+.+
T Consensus 308 ----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 308 ----------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred ----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1134445556677788888888888888888765 56789999999999999999999999999
Q ss_pred cccc
Q 009538 462 HRFT 465 (532)
Q Consensus 462 ~~~~ 465 (532)
.+..
T Consensus 378 l~~~ 381 (437)
T TIGR00792 378 LGII 381 (437)
T ss_pred HHHc
Confidence 8765
No 86
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1e-17 Score=167.94 Aligned_cols=413 Identities=15% Similarity=0.062 Sum_probs=222.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
+...+.+.++=.+|..++|++.|+++|++ |||+++...++++++++++++++-. +.+-..-.
T Consensus 83 s~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~-----------------~~~~~~~m 144 (538)
T KOG0252|consen 83 SGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVG-----------------TTSPLGVM 144 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCC-----------------CCCCcchh
Confidence 34456677777888999999999999995 9999999999999999998877632 22222347
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-----------c
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD-----------V 151 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~-----------~ 151 (532)
.++++.|+++|+|.|+-+|+.-+..+|. +..+.|+ ...+.+++...+++..|.+++.++.+..... .
T Consensus 145 ~~L~~~R~~LGiGIGGDYPlSAtI~SE~-an~~~RG-a~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~ 222 (538)
T KOG0252|consen 145 MTLCFFRFLLGIGIGGDYPLSATIMSES-ANKKTRG-AFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDG 222 (538)
T ss_pred hHHHHHHHHhhccccCCCcchHHHhhhh-hhhcccc-ceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHH
Confidence 8899999999999999999999988885 3333233 2334556666666666666666554443221 2
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHH-HHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCC
Q 009538 152 SWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTV-QVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHT 230 (532)
Q Consensus 152 gw~~~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (532)
=||..|.+.++..++. +++ |+.. |+.++-.... +-...+..+.. .+.+. +..+.++.
T Consensus 223 vWRl~~glg~vpa~~~---ly~---Rl~M--~Et~~Y~al~~~~~~~a~~d~~--k~~~~----~~~~~~~~-------- 280 (538)
T KOG0252|consen 223 VWRIIFGLGAVPALLV---LYF---RLKM--PETARYTALVSKKLKQAAGDMK--KVLSV----DIEAESTA-------- 280 (538)
T ss_pred HHHHHHHHHHHHHHHH---HHh---hhcC--CcchhHHHHhhcCHhhhhhccc--ccccc----ccchhhcc--------
Confidence 3898888877653332 222 1111 1111111000 00001110000 00000 00000000
Q ss_pred CcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHh-cccchhhhhhhhccCcccCC
Q 009538 231 GQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVAL-VQQQTYVVFQALQSDRRVGN 309 (532)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 309 (532)
+........++.++......+ .-..+ +.....|+.+ .-.++..+.|....+. +|-
T Consensus 281 ------------------~~~~~~~~~~~~~F~~~f~~~----hg~~L-lgt~~~WFllDiafy~~nL~~s~I~~~-ig~ 336 (538)
T KOG0252|consen 281 ------------------ESDVPPPSNSFGLFSRLFLRW----HGKHL-LGTAGTWFLLDIAFYGQNLFQSVIFSA-IGV 336 (538)
T ss_pred ------------------ccCCCCcccccchHHHHHHHH----HHHHH-HHHHHHHHhhhhhhhccccHHHHHHHh-hcc
Confidence 000001111111111111111 01111 1222223322 2222233333322221 110
Q ss_pred -ccceeChhh--hhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 009538 310 -THFKIPAAS--YAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSR 386 (532)
Q Consensus 310 -~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (532)
+.-+..-.. ....+.+.......-.-++..-+.++++|| ..-+.|++++++-++..+..-+
T Consensus 337 ~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-------~iq~~GF~~~~i~~~~~~~~y~--------- 400 (538)
T KOG0252|consen 337 IPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-------YIQLMGFFIMTIFFFVIAGPYN--------- 400 (538)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-------HHHHhhHHHHHHHHHHHcCCcc---------
Confidence 000000000 111222222222111223344456776666 5667888888887777665311
Q ss_pred CCcccccCCccccchHHHHHHHHHHH-HHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 009538 387 PVGLEQRRGAISSLSGLWLIPQLSLI-GFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFT 465 (532)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~i~~~~l~-~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~ 465 (532)
...+....++.+.+. .+++-.-..+...+.+|.+|.+.||+.-|+...+.-+|+.++........+..
T Consensus 401 -----------~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~ 469 (538)
T KOG0252|consen 401 -----------QLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN 469 (538)
T ss_pred -----------cccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc
Confidence 011222223333332 33444445556677799999999999999999999999999999988876521
Q ss_pred cCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcccc
Q 009538 466 KGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKGSGDGAPEV 520 (532)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~ 520 (532)
.+.+ .+..++++++++++.++.++.+++ +|.++++.|+..++.
T Consensus 470 --------yp~~---~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 470 --------YPPN---IGVRNVFIILAGCMLLGILFTLLI-PETKGKSLEEISNEE 512 (538)
T ss_pred --------CCcc---ccchHHHHHHHHHHHHhHheeEEe-ecccccCHHHhcChh
Confidence 2221 245678999999999998887765 599999887654443
No 87
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.78 E-value=2.1e-17 Score=169.74 Aligned_cols=132 Identities=13% Similarity=0.128 Sum_probs=108.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.+.+++.+.+.++..++++++|+++||+ |||+++.++.++..++.+++++++ +
T Consensus 34 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~~~~~~~-----------------------~ 89 (366)
T TIGR00886 34 LSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCLWAGLAV-----------------------Q 89 (366)
T ss_pred CCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHh-----------------------h
Confidence 3678899999999999999999999999996 999999999999999999999874 1
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc----------c
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS----------D 150 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~----------~ 150 (532)
+++.++++|+++|++.+.. +....+++|++|++ +|++..+++....++|..+++.+++.+.. +
T Consensus 90 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKK------IQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHh------hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 5778999999999997655 55788999998752 23457888887888888888877766553 3
Q ss_pred ccchhhhH-HHHHH
Q 009538 151 VSWAWGLG-IPAFM 163 (532)
Q Consensus 151 ~gw~~~F~-v~~~~ 163 (532)
.+|||.|+ ..++.
T Consensus 163 ~~w~~~~~~~~~~~ 176 (366)
T TIGR00886 163 LAWGWAFVIVPAGI 176 (366)
T ss_pred ccccchhHHHHHHH
Confidence 58999994 43443
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.78 E-value=9.9e-17 Score=167.01 Aligned_cols=143 Identities=8% Similarity=-0.057 Sum_probs=105.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHH---HhhcccCCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSL---TAAISKLHPPDCGNQDSGACPGP 77 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~---a~~~~~~~~~~~~~~~~~~~~~~ 77 (532)
+++.+.+++.+++.+...++++++|+++||+ ||||.++.+...+.++...... +....
T Consensus 35 ~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 95 (396)
T TIGR00882 35 LSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVLFAPFFIYVFGPLLQ------------------ 95 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhhhHHH------------------
Confidence 3578899999999999999999999999996 9999999887777665443221 11000
Q ss_pred CchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhh
Q 009538 78 TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 78 ~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F 157 (532)
...+..++++|++.|++.+...|....+..|. .+ ++ +..++......++|.++||.+++.+.+ .+|+++|
T Consensus 96 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~---~~----~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f 165 (396)
T TIGR00882 96 -SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV-SR---NS----NFEYGKARMFGCVGWALCASIAGILFS-IDPQIVF 165 (396)
T ss_pred -HHHHHHHHHHHHHHHHHhccchhhHHHHHHHh-hh---hc----ccccchhhhhcccHHHHHHHHHhhhhc-cCchHHH
Confidence 01234567789999999999899888777664 21 11 124667777889999999999998865 6999999
Q ss_pred HHHHHHHHHHHHHHH
Q 009538 158 GIPAFMMFLSCAMFF 172 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~ 172 (532)
++.++..++..+..+
T Consensus 166 ~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 166 WLGSGFALILMLLLM 180 (396)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998776665544433
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.75 E-value=1e-15 Score=159.80 Aligned_cols=139 Identities=15% Similarity=0.104 Sum_probs=108.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccc-----cchH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYF-----GRYK-TLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGAC 74 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~-----Grr~-~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~ 74 (532)
+|.++.+++...... .+..+++|+++|| + |||| .+.++.++.+++..++++...
T Consensus 31 ~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~----------------- 90 (402)
T PRK11902 31 LDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAASIAAMAFCPP----------------- 90 (402)
T ss_pred CCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHHHHHHHhcCc-----------------
Confidence 356777877665554 6899999999999 6 7876 688888888888888777631
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-ccc
Q 009538 75 PGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD-VSW 153 (532)
Q Consensus 75 ~~~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~-~gw 153 (532)
..+++.+++..++.++..+...|...+++.|++|++ +|+++.++...+.++|..+|+.+++++.+. +||
T Consensus 91 ----~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 91 ----HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE------ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred ----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 125677888888888999999999999999997642 234578888888999999999998888875 599
Q ss_pred hhhhHHHHHHHHHHHH
Q 009538 154 AWGLGIPAFMMFLSCA 169 (532)
Q Consensus 154 ~~~F~v~~~~~~l~~~ 169 (532)
|..|++.++..++..+
T Consensus 161 ~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 161 GNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999997776555444
No 90
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.75 E-value=2.6e-16 Score=161.36 Aligned_cols=142 Identities=15% Similarity=0.124 Sum_probs=108.5
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhcc----ccchHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTY----FGRYKTL-GFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPG 76 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~----~Grr~~l-~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~ 76 (532)
|.++.++.... .+...+ .+++|+++||+ +||||.+ +.+.++.++...++++.+.
T Consensus 21 s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~------------------- 79 (356)
T TIGR00901 21 SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP------------------- 79 (356)
T ss_pred CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-------------------
Confidence 56677777544 333333 89999999995 3899974 6677777777777766532
Q ss_pred CCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc----
Q 009538 77 PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS---- 152 (532)
Q Consensus 77 ~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g---- 152 (532)
..+++.+++..++.+++.+...+...+++.|++|++ +|+.+.++...+.++|.++++.+++++....|
T Consensus 80 --~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~ 151 (356)
T TIGR00901 80 --STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDE------ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTG 151 (356)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 125667778888889999999999999999998642 23457889999999999999999999988888
Q ss_pred ----chhhhHHHHHHHHHHHHHHH
Q 009538 153 ----WAWGLGIPAFMMFLSCAMFF 172 (532)
Q Consensus 153 ----w~~~F~v~~~~~~l~~~~~~ 172 (532)
||+.|++.++..++..+..+
T Consensus 152 ~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 152 LITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred cccccHHHHHHHHHHHHHHHHHHH
Confidence 99999998887666554433
No 91
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.74 E-value=4.9e-16 Score=155.44 Aligned_cols=354 Identities=11% Similarity=0.038 Sum_probs=235.2
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|+.|.++++++=.+...+.-++-|.+.||+ |.|++..++.++..+-.+..+++.+.+
T Consensus 46 LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~~IP~~~~~~a~~~~--------------------- 103 (417)
T COG2223 46 LSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLLLIPCLGLAFAVTYP--------------------- 103 (417)
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHHHHHHHHHHHHccCC---------------------
Confidence 5788999999999999999999999999995 999999999999999999999996533
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc---chhhh
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS---WAWGL 157 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g---w~~~F 157 (532)
+++.+++.+++.|++.|-+. ...++++.+|||++ .+.+++++. ..|+|..+...+++++....+ |+...
T Consensus 104 ~~~~ll~~gll~G~~GasFa-v~m~~~s~~fP~~~------qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~ 175 (417)
T COG2223 104 STWQLLVIGLLLGLAGASFA-VGMPNASFFFPKEK------QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVA 175 (417)
T ss_pred chHHHHHHHHHHhcccceeh-cccccccccCChhh------hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 56889999999999987654 48888999998632 246899988 999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchh
Q 009538 158 GIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLD 237 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (532)
.+..+.+++..+..++..++.++.++..++... ..+
T Consensus 176 ~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--~~~------------------------------------------ 211 (417)
T COG2223 176 GIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--AQL------------------------------------------ 211 (417)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhhccccccch--hHH------------------------------------------
Confidence 998888888777777766554433222211110 000
Q ss_pred hhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcc-cchhhhhhhhccCcccCCccceeCh
Q 009538 238 KAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQ-QQTYVVFQALQSDRRVGNTHFKIPA 316 (532)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (532)
+.+...|.+..+..+......-++.+.. .+.++..+..... ...
T Consensus 212 --------------------------~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~---------~~A 256 (417)
T COG2223 212 --------------------------KAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSP---------VTA 256 (417)
T ss_pred --------------------------HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh---------hhH
Confidence 0001011111111111111111111111 1112222211111 223
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
+......++...+.-|+.+++ .||++.+ +...+.+..++++.+....... ..
T Consensus 257 g~~a~~f~~~g~l~Rp~GG~L----sDR~Gg~-------rv~~~~f~~~~~~~~~l~~~~~-----~~------------ 308 (417)
T COG2223 257 GLIAFLFPLIGALARPLGGWL----SDRIGGR-------RVTLAVFVGMALAAALLSLFLT-----GF------------ 308 (417)
T ss_pred HHHHHHHHHHHHHHHhccchh----hhhccch-------hHHHHHHHHHHHHHHHHHcccc-----cc------------
Confidence 344555555556666765555 6666554 5666666776666666655421 00
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPE 476 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~ 476 (532)
....+.+..+..++.+.+..++.....+-++..++|+ +.|.+.|+......+|+..-|...+...+.++
T Consensus 309 ~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg---------- 377 (417)
T COG2223 309 GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG---------- 377 (417)
T ss_pred ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcc----------
Confidence 0113344444444445555555555677778888876 46899999999999999999999999887653
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 477 DLNKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
.+...|+.+..+.+++.+..+....+
T Consensus 378 -----~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 378 -----SYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35667888888888888877766543
No 92
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.72 E-value=9.4e-16 Score=168.18 Aligned_cols=166 Identities=14% Similarity=0.169 Sum_probs=125.2
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhccc-CCCC-------CCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISK-LHPP-------DCGNQDSG 72 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~-~~~~-------~~~~~~~~ 72 (532)
+++.+.+++.+.|.++..++.++.|+++||+ ||||.+.++++++++|+++++++..+.. +... +..+.|..
T Consensus 65 lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~ 143 (633)
T TIGR00805 65 LSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSF 143 (633)
T ss_pred CCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccc
Confidence 4678899999999999999999999999996 9999999999999999999998753221 1000 00011122
Q ss_pred CCC-----------------CCC--chhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHH
Q 009538 73 ACP-----------------GPT--PWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTF 133 (532)
Q Consensus 73 ~~~-----------------~~~--~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~ 133 (532)
.|. -.+ ...+..++++|+++|+|.+...+...+++.|++|++ +++..+++++...
T Consensus 144 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~------~~~~~~~i~~~~~ 217 (633)
T TIGR00805 144 LCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSK------NSPLYIGILESIA 217 (633)
T ss_pred cccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcc------ccHHHHHHHHHHH
Confidence 332 111 124678889999999999999999999999998753 2356899999999
Q ss_pred hHHHHHHHHhhhhccccc----------------------cchhhhHHHHHHHHHHHHHHHh
Q 009538 134 TFAMMISLTVIVYVQSDV----------------------SWAWGLGIPAFMMFLSCAMFFL 173 (532)
Q Consensus 134 ~~G~~~g~~~~g~i~~~~----------------------gw~~~F~v~~~~~~l~~~~~~~ 173 (532)
.+|.++|+++++++.+.+ +||..|++.+++.++..+.++.
T Consensus 218 ~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999987532 2677788777665555444433
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=4.7e-15 Score=158.08 Aligned_cols=138 Identities=15% Similarity=0.151 Sum_probs=107.1
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
+....|+.+.+.++..+..++.|+|+|.| |||..++++.++..+|+++++.+. |.
T Consensus 77 ~~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------------------~~ 131 (599)
T PF06609_consen 77 SDNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------------------NM 131 (599)
T ss_pred CccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------------------cH
Confidence 45668999999999999999999999995 999999999999999999999985 57
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHH
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAF 162 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~ 162 (532)
..++.+-.+.|+|.|.... ....++|..|. |.| .................++.++..+..+.+|||.|++.++
T Consensus 132 ~~~iag~~l~GvgaG~~~~-~~~~isEl~p~---k~R---~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAGVQEL-AALAISELVPN---KWR---GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred HHHHHHHHHHHHhhHHHHH-HHHHHHHhccc---chh---hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 7899999999999888765 45568998764 222 2233333333334444566676666667899999999988
Q ss_pred HHHHHHHHHH
Q 009538 163 MMFLSCAMFF 172 (532)
Q Consensus 163 ~~~l~~~~~~ 172 (532)
...+.++..+
T Consensus 205 ~~~i~~vl~~ 214 (599)
T PF06609_consen 205 WSGIALVLIF 214 (599)
T ss_pred HHHHHHHHHH
Confidence 7666655433
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.71 E-value=1e-15 Score=150.23 Aligned_cols=114 Identities=20% Similarity=0.113 Sum_probs=101.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
.-+|.+-+.|.++..+.++.+|.++|+| |||.+++.+++..++..++.+++. |+.
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~------------------------~F~ 122 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR------------------------NFA 122 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH------------------------HHH
Confidence 3468889999999999999999999997 999999999999999999999986 576
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS 149 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~ 149 (532)
.+.++|++.|+.-|-..+ .-++++|.+++++ |. ..++.......+|..+||.+||++++
T Consensus 123 afv~aR~l~Gi~kgnl~v-~rAiisdV~sek~-r~-----l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 123 AFVLARFLGGIFKGNLSV-IRAIISDVVSEKY-RP-----LGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHhhhhccCchHH-HHHHHHhhcChhh-cc-----ceeeeeehhhhcchhhcchhhhHHHh
Confidence 788889999999998766 8899999988633 22 36999999999999999999999987
No 95
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=2.4e-15 Score=149.53 Aligned_cols=121 Identities=12% Similarity=0.090 Sum_probs=108.5
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++..+++.+..+|..++.+++++.|++.+|+ |+|+.++.|+.++++|..+..=++. ..
T Consensus 45 ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~---------------------~~ 102 (422)
T COG0738 45 LTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS---------------------SK 102 (422)
T ss_pred ccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh---------------------hh
Confidence 4678999999999999999999999999996 9999999999999999999865542 14
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS 149 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~ 149 (532)
++..++++.++.|.|.|..+..+++|++...++++..+| ++..+....+|+.+||.+++++..
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~r------lnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFR------LNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHH------HHHHHHhhhhHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999887655555 899999999999999999998765
No 96
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.70 E-value=5.1e-16 Score=153.24 Aligned_cols=142 Identities=15% Similarity=0.095 Sum_probs=127.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
+.+.+++.+++.+.+.+..++.|.+.||+ |+|-.+++|+.++..++++.++.. ++
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~------------------------sy 159 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN------------------------SY 159 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc------------------------hh
Confidence 67889999999999999999999999996 999999999999999999999986 47
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHH
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAF 162 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~ 162 (532)
++++++|.+||+|.++...+..++++|.||++.+ |++.++.-..++.+|..+||.+||.+=+-.|.+.+|++-++
T Consensus 160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~ 234 (464)
T KOG3764|consen 160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAI 234 (464)
T ss_pred HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHH
Confidence 7999999999999999999999999999986433 34589999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhh
Q 009538 163 MMFLSCAMFFLG 174 (532)
Q Consensus 163 ~~~l~~~~~~~~ 174 (532)
+.++-..+.++.
T Consensus 235 v~Lld~~L~l~v 246 (464)
T KOG3764|consen 235 VLLLDGALQLLV 246 (464)
T ss_pred HHHHHHHHHHhe
Confidence 777765554443
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.69 E-value=1.3e-14 Score=152.55 Aligned_cols=412 Identities=8% Similarity=0.012 Sum_probs=223.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhh----ccccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSD----TYFGRYKTLGFA-SVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPG 76 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD----~~~Grr~~l~~~-~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~ 76 (532)
+....+.+..+..+...+.+++.|+++| |+ ||||.++++ .....++.++.+++.++..+...+. ++ +
T Consensus 37 ~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~-~~------~ 108 (477)
T TIGR01301 37 PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNL-DK------K 108 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHHHHHHHHHHHhCchhhhhccccc-cc------c
Confidence 4567788888889999999999999999 55 999999875 5666666677777654321100000 00 0
Q ss_pred CCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc--cc----
Q 009538 77 PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ--SD---- 150 (532)
Q Consensus 77 ~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~--~~---- 150 (532)
........++++-.+..++....++...++++|.+|+++++. +.+.++.....++|..+|+.++++.. +.
T Consensus 109 ~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~----~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~ 184 (477)
T TIGR01301 109 TKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRT----RIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFT 184 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccc
Confidence 001123455556666667888888888999999998654221 34788899999999999999988751 11
Q ss_pred ---------ccchhhhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcc
Q 009538 151 ---------VSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKN 221 (532)
Q Consensus 151 ---------~gw~~~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (532)
.+.++.|++.++..++..++.....++.+...+++.+.. +.++ .+
T Consensus 185 ~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~---------------~~~~-----------~~ 238 (477)
T TIGR01301 185 KTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS---------------EAAP-----------PS 238 (477)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh---------------hccc-----------cc
Confidence 167889999888777776655544444221111000000 0000 00
Q ss_pred cccCCCCCCCcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhh-hhhhhhHhHHHHHHHHHHHhcccchhhhhhh
Q 009538 222 CINSKLPHTGQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEV-KVLIRVIPIWASAIVYYVALVQQQTYVVFQA 300 (532)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (532)
+. .....++... +.+++. |.+.+++...++.-+-|+.+..+.+.+..+.
T Consensus 239 ~~-----------------------------~~~~~~~~i~-~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~ 288 (477)
T TIGR01301 239 KH-----------------------------GEEAFFGELF-GAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGRE 288 (477)
T ss_pred cc-----------------------------chhhhHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 00 0000000000 011111 1122222222222333333333333332221
Q ss_pred hccCcccCCccceeC---hhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 009538 301 LQSDRRVGNTHFKIP---AASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIED 377 (532)
Q Consensus 301 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 377 (532)
......-.++.++-. .......+.+...+...+ ..++.+++++|+ ..-..+.++.+++++...+...
T Consensus 289 v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~----l~~l~~~~g~~k------~~~~~s~~~~~~~l~~~~~i~~ 358 (477)
T TIGR01301 289 VYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIG----MEKLCRGWGAGK------RLWGIVNIILAICLAATVLVTY 358 (477)
T ss_pred HcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhccch------hHHHHHHHHHHHHHHHHHHHHh
Confidence 110000000011000 111222333333333333 333355554321 2335676777777766665431
Q ss_pred HHhhhhccCCCcccccCCccccch-HHHHHHHHHHHHHHhHhhhhhhhhhhhcccCch--hHHHHHHHHHHHHHHHHHHH
Q 009538 378 KRRSLALSRPVGLEQRRGAISSLS-GLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPEN--MRSIGGSLAFVGFAISNYLN 454 (532)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~--~rg~~~gl~~~~~~ig~~l~ 454 (532)
.-.+..+.++. + .--..+.. .+..+..+.++|+.-+......++++++..|++ ..|..+|+.|++-.+.+.+.
T Consensus 359 ~~~~~~~~~~~---~-~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~ 434 (477)
T TIGR01301 359 VAKNSRYYDGD---G-ESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIV 434 (477)
T ss_pred hhhcccccccc---c-cccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHH
Confidence 00000000000 0 00001112 466777888899999999889999999999954 45999999999999999999
Q ss_pred HHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009538 455 GFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYK 509 (532)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~ 509 (532)
....|.+.+..++. ..+.+.+-++.++++.+..+...|+.+
T Consensus 435 sl~~g~~~~~~g~~--------------~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 435 SLGSGPWDQLFGGG--------------NLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHcCCC--------------CeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 98888865544321 234666667777777777777666544
No 98
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.66 E-value=1.3e-14 Score=141.49 Aligned_cols=169 Identities=15% Similarity=0.135 Sum_probs=121.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
.-|...+...-..++.+++..+|.++|++ ||||.+.+....-++...+.+.++ |+
T Consensus 112 ~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~sp------------------------nf 166 (528)
T KOG0253|consen 112 EGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGASP------------------------NF 166 (528)
T ss_pred hhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCCC------------------------Ce
Confidence 45677888888999999999999999996 999999998888888777777764 67
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHH
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAF 162 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~ 162 (532)
.++++.|.+.|+|.|+ .|...++-.|.-|..+ |. ...-+. .....|.++...+.=.+..++||||.......
T Consensus 167 ~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~-r~-----~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~ 238 (528)
T KOG0253|consen 167 ASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH-RW-----LLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSST 238 (528)
T ss_pred ehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC-CC-----cchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 7899999999999999 8888888888666422 11 122222 67778888887777667788999998776554
Q ss_pred -HHHHHHH-HHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCC
Q 009538 163 -MMFLSCA-MFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLP 207 (532)
Q Consensus 163 -~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (532)
.++.+.. ++...+||+...+.++.+ ..+.+..+.|.++...|
T Consensus 239 pl~~~a~f~~w~~ESpRf~~~~G~~~k---AletL~kiArmNg~qlp 282 (528)
T KOG0253|consen 239 PLMFAARFLVWVYESPRFYLAKGDDYK---ALETLHKIARMNGKQLP 282 (528)
T ss_pred HHHHHHHHHhhcccCcchhhhcCChHH---HHHHHHHHHHhcCCCCC
Confidence 3333322 334456776554444433 34455566666665554
No 99
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.65 E-value=3.1e-14 Score=146.38 Aligned_cols=129 Identities=9% Similarity=0.013 Sum_probs=116.2
Q ss_pred Cchhh-hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCc
Q 009538 1 MKSIT-ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTP 79 (532)
Q Consensus 1 ~~~~~-~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (532)
+|+++ .+.+.++|..++.++++++|+++||+ |-|+++.++.+.+++.+++.++++
T Consensus 58 lT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~----------------------- 113 (511)
T TIGR00806 58 FTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT----------------------- 113 (511)
T ss_pred CCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 46778 89999999999999999999999995 999999999999999999999986
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHH
Q 009538 80 WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 80 ~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v 159 (532)
++..+.+.|++.|+++|+.. +...++..++|+ ++|+++.+++..+.++|.++++++++++ ..+|||+-+.+
T Consensus 114 -Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~------kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~L 184 (511)
T TIGR00806 114 -SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP------SRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTL 184 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHH
Confidence 47789999999999999999 899999999985 3346789999999999999999999994 56899987776
Q ss_pred HHH
Q 009538 160 PAF 162 (532)
Q Consensus 160 ~~~ 162 (532)
+.+
T Consensus 185 n~I 187 (511)
T TIGR00806 185 NII 187 (511)
T ss_pred HHH
Confidence 654
No 100
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1.7e-14 Score=153.24 Aligned_cols=398 Identities=14% Similarity=0.062 Sum_probs=226.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+|+.++......++.|+.+.+.||| |.|++.+.|.++..+|.++.++++++.
T Consensus 79 s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~lssF~~~i~---------------------- 135 (509)
T KOG2504|consen 79 SSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLSSFATSLW---------------------- 135 (509)
T ss_pred CccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHHHHHhhHH----------------------
Confidence 456689999999999999999999999996 999999999999999999999997532
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
..++..=++.|+|.|+........++.+|. ++|+.+.++-..+..+|.++-|.+.-++.+..|||+.+++.+
T Consensus 136 -~l~lt~gvi~G~G~~~~~~paiviv~~YF~-------kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~ 207 (509)
T KOG2504|consen 136 -QLYLTFGVIGGLGLGLIYLPAVVILGTYFE-------KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFG 207 (509)
T ss_pred -HHHHHHHHHhhccchhhhcchhhhhhhHhH-------HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHH
Confidence 355666778899999999889999998875 223457777777888888888888889999999999999877
Q ss_pred HHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcc
Q 009538 162 FMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAI 241 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (532)
...+-.+..-...+|.....+|. ...+... .....+............++....+..........+..
T Consensus 208 ~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 275 (509)
T KOG2504|consen 208 GISLNVLVAGALLRPLSPPKKPN--EEKDLRN--------SAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGP-- 275 (509)
T ss_pred HHHHHHHHHHHHcCCCCcCCCch--hhhhhcc--------ccccccccccccccccccCCCCCCcccccchhhhhhCC--
Confidence 76655555555555533222222 0000000 00000000000000000000000000000000000000
Q ss_pred cCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhhhh
Q 009538 242 MTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASYAI 321 (532)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (532)
+ ..+..+.......+..+..++...+...+...+....+.......+.+ ......+.... ......++.
T Consensus 276 ----~-~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~--~~~~g~~~~~a----a~l~Siigi 344 (509)
T KOG2504|consen 276 ----D-KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSY--AKSLGLSSNDA----AFLLSIIGV 344 (509)
T ss_pred ----c-cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHH--HhhcCCChhhh----HHHHHHHHH
Confidence 0 000000000000000111122111111111111111111111000001 00111111110 011223333
Q ss_pred hhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccch
Q 009538 322 FSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLS 401 (532)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (532)
.+.++-++.+.+.|+- . .+......+++++.+++..+.... .+
T Consensus 345 ~~i~gRi~~G~laD~~--------~-----~~~~~~~~~~ll~~gl~~~~~p~~------------------------~~ 387 (509)
T KOG2504|consen 345 SDIIGRIILGLLADKP--------G-----IRALVLFLLTLLIAGLARLFLPFA------------------------TT 387 (509)
T ss_pred hhhhhhhhhhhhcCcc--------c-----cchHHHHHHHHHHHHHHHHHHHHh------------------------cc
Confidence 4444444444443332 1 223355566777776666444443 35
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcch
Q 009538 402 GLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKG 481 (532)
Q Consensus 402 ~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (532)
.+.++...++.|+..+...........|..+.+.-..+.|+..+.+.++..+++.+.+++.|.++
T Consensus 388 ~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg--------------- 452 (509)
T KOG2504|consen 388 YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG--------------- 452 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC---------------
Confidence 66777777888998888887777889999999999999999999999999999999998887653
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Q 009538 482 RLDYFYYLVAALGLLNFGFFLLCA 505 (532)
Q Consensus 482 ~~~~~~~~~~~~~vv~~~~~~~~~ 505 (532)
+|+..|+..+++.+++....++..
T Consensus 453 ~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred CeeeehhhcChHHHHHHHHHHHhH
Confidence 356777777777777766555443
No 101
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.63 E-value=8e-14 Score=146.88 Aligned_cols=145 Identities=12% Similarity=0.068 Sum_probs=121.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
..+.+++.++|.+++.++.+++|.|.||+ .-.+.+....+.+++-.++.+... |+
T Consensus 80 ~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------------s~ 134 (495)
T KOG2533|consen 80 GNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------------SF 134 (495)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh------------------------hh
Confidence 46789999999999999999999999996 988888888888888777766653 67
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhc------cccccchhh
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYV------QSDVSWAWG 156 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i------~~~~gw~~~ 156 (532)
+.+++.|++.|+.+++..|....+++.+|.+++ ++..+++++....+|.++|.++...+ ....||||.
T Consensus 135 ~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~ 208 (495)
T KOG2533|consen 135 PGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWL 208 (495)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceee
Confidence 889999999999999999999999999997533 34569999999999999999887664 345799999
Q ss_pred hHHHHHHHHHHHHHHHhhccee
Q 009538 157 LGIPAFMMFLSCAMFFLGSRLY 178 (532)
Q Consensus 157 F~v~~~~~~l~~~~~~~~~~~~ 178 (532)
|++.+++.++..++.++..|..
T Consensus 209 FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 209 FIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred hhHHHHHHHHHHheEEEEecCC
Confidence 9999987777666655555553
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=99.63 E-value=8.9e-14 Score=147.29 Aligned_cols=108 Identities=14% Similarity=0.153 Sum_probs=77.6
Q ss_pred hhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHH
Q 009538 325 LGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLW 404 (532)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (532)
++.++..++..++ .+|+++| +.+.+|..+..++.+..... ...+.+.
T Consensus 275 ~~~~~~~~l~~~l----~~r~g~~-------~~~~~g~~~~~i~~~~~~~~----------------------~~~~~~~ 321 (448)
T PRK09848 275 VGTVASAPLVPGM----VARIGKK-------NTFLIGALLGTCGYLLFFWV----------------------SVWSLPV 321 (448)
T ss_pred HHHHHHHHHHHHH----HHHhCcH-------HHHHHHHHHHHHHHHHHHHc----------------------CchhHHH
Confidence 3344455554433 4554433 66777887777766554432 1234555
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhcccCch-------hHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 009538 405 LIPQLSLIGFSEAFTIIAEVEFYYKQFPEN-------MRSIGGSLAFVGFAISNYLNGFLISMVHRFT 465 (532)
Q Consensus 405 ~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~-------~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~ 465 (532)
..+.+++.++|++...+..+++..|..|.+ .+|..+|++++.+.+|..+++.+.+.+.+..
T Consensus 322 ~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 322 ALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 666677889999999999999999988754 4699999999999999999999999987654
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.63 E-value=1e-13 Score=147.37 Aligned_cols=344 Identities=11% Similarity=0.064 Sum_probs=193.3
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhcccc-----chHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFG-----RYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACP 75 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~G-----rr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~ 75 (532)
+|+++.+...+...+...+-++ +|.++|++ + ||+.++++.++.. ...+..++.. +
T Consensus 58 ~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~~-~~~~~~l~~~-~---------------- 117 (468)
T TIGR00788 58 LDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLGS-AILYGLLPGK-V---------------- 117 (468)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHHH-HHHHHhcccc-c----------------
Confidence 3567777888888888887666 99999996 8 7887888776653 1222222210 0
Q ss_pred CCCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchh
Q 009538 76 GPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAW 155 (532)
Q Consensus 76 ~~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~ 155 (532)
.+.....+.+++.+++.+...++..+++.|..+ +++ +..+...++.|...++|.++|+.++|++.++.+|+.
T Consensus 118 ----~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~ 189 (468)
T TIGR00788 118 ----SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRI 189 (468)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcch
Confidence 123344458899999999999999999999887 222 233456677777888999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhh-HHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCccc
Q 009538 156 GLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLAS-TVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFR 234 (532)
Q Consensus 156 ~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (532)
.|++.+.+.++..+..+...++.....|+.++... .........
T Consensus 190 ~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 234 (468)
T TIGR00788 190 LFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGV----------------------------------- 234 (468)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhH-----------------------------------
Confidence 99998776666543333222210001111000000 000000000
Q ss_pred chhhhcccCCcccccCCCCCCCCCccchhhhhhhh------hhhhhhHhHHHHHHHHHHHhcccch-hhhhhhhccCccc
Q 009538 235 CLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEV------KVLIRVIPIWASAIVYYVALVQQQT-YVVFQALQSDRRV 307 (532)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 307 (532)
.+ . .++...+. +.+...+.+. ...+........ .++... ...
T Consensus 235 -~~-------------------~----~~~~~~~l~~~l~~~~i~~~l~fi---fl~~~~~~~~~~~~f~~~~----~~l 283 (468)
T TIGR00788 235 -LA-------------------N----VKVQILGLRGAIQLLEIAKPLIFI---FLSYANLPGASGSVFCATT----QCL 283 (468)
T ss_pred -HH-------------------H----HHHHHHHHHHHHhcHHHHHHHHHH---HHHHhhcCCCCceeEEEEc----ccC
Confidence 00 0 00000011 1111111111 110111111111 111111 112
Q ss_pred CCccceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 009538 308 GNTHFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRP 387 (532)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (532)
| .-....+.......++.+++..+.+++ .+| .+..+.+.++.++.+++......... +-+. ..+
T Consensus 284 G--~s~~~~G~~~~~~~v~~i~g~~~~~~~--------~~~---~~~r~~l~~~~~l~~~~~~~~~~l~~-~~~~--~~g 347 (468)
T TIGR00788 284 P--GGPSFSGMSKVVGNLGSLCGVGGYDRF--------LKT---FPYRLLFGVTTLLYTLSSLFDLILVK-RWNL--AFG 347 (468)
T ss_pred C--CCcchhhhHHHHHHHHHHHHHHHHHHH--------Hhh---CCHHHHHHHHHHHHHHHHhCceeeee-cccc--ccC
Confidence 2 000112233333445555555554433 333 44556677777777666543221100 0000 000
Q ss_pred CcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 009538 388 VGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFT 465 (532)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~ 465 (532)
..+.+......++.+++.++...+...++.+..|++.+|+..|+......+|..+++.+++.+.+..
T Consensus 348 -----------i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 348 -----------ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred -----------CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0123344555677888888888888999999999999999999999999999999999988887654
No 104
>PTZ00207 hypothetical protein; Provisional
Probab=99.59 E-value=9.3e-13 Score=141.41 Aligned_cols=143 Identities=12% Similarity=0.026 Sum_probs=109.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|..+.+++.++.. ...++++++|+++||+ |||++++++.+++.+|+++++++.+- ....+
T Consensus 60 s~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~------------------~i~~s 119 (591)
T PTZ00207 60 TQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQE------------------VIEGS 119 (591)
T ss_pred CHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhcc------------------cccCc
Confidence 5667787777643 3446777899999995 99999999999999999999997320 00136
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHH-HHHhhhhccccccchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMI-SLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~-g~~~~g~i~~~~gw~~~F~v~ 160 (532)
++.+++.|+++|+|.+...+.+...+.++|| ++|+++.++......+|+++ +++..+++. .+|++.|++.
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-------~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l 190 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-------SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFL 190 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHH
Confidence 8899999999999999998889999999986 22356899999999999975 655666654 4678877776
Q ss_pred HHHHHHHHHHHHh
Q 009538 161 AFMMFLSCAMFFL 173 (532)
Q Consensus 161 ~~~~~l~~~~~~~ 173 (532)
+++.++..++.+.
T Consensus 191 ~vl~~vv~ll~~~ 203 (591)
T PTZ00207 191 MSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHh
Confidence 6655554444333
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.59 E-value=2.1e-13 Score=145.45 Aligned_cols=144 Identities=8% Similarity=-0.012 Sum_probs=91.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhh----ccccc-hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSD----TYFGR-YKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACP 75 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD----~~~Gr-r~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~ 75 (532)
+++..++.+..+.-+.-++..|+.|+++| | ||| |+-++++.+..+++..++-..++.+
T Consensus 39 ls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~~llf~~p~~~---------------- 101 (473)
T PRK10429 39 LSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVLFLLFSAHLFE---------------- 101 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHHHHHHcCCCCC----------------
Confidence 35677888888888889999999999999 7 499 5555667777777766663322111
Q ss_pred CCCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc-------
Q 009538 76 GPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ------- 148 (532)
Q Consensus 76 ~~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~------- 148 (532)
+...+..+++.-++.+++..+......+++.|..++. ++|++..++-....++|..+++.+...+.
T Consensus 102 --~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~-----~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~ 174 (473)
T PRK10429 102 --GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDK-----REREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGD 174 (473)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1123455666666777888788777888888875332 23345666656667777555554433221
Q ss_pred ccccchhhhHHHHHHHHHHH
Q 009538 149 SDVSWAWGLGIPAFMMFLSC 168 (532)
Q Consensus 149 ~~~gw~~~F~v~~~~~~l~~ 168 (532)
+..+|++...+.++..++..
T Consensus 175 ~~~g~~~~~~i~~~~~~~~~ 194 (473)
T PRK10429 175 RGFGFQMFTLVLIAFFIVST 194 (473)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 12356666666555544433
No 106
>PRK09669 putative symporter YagG; Provisional
Probab=99.58 E-value=2.7e-13 Score=143.50 Aligned_cols=146 Identities=10% Similarity=0.085 Sum_probs=97.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhcc---ccchHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTY---FGRYKT-LGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPG 76 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~---~Grr~~-l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~ 76 (532)
++..+++.+..+..+...+..|+.|+++||. +||||- ++.+.+.++++.+++...++.+
T Consensus 42 ls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~----------------- 104 (444)
T PRK09669 42 LSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFG----------------- 104 (444)
T ss_pred CCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCC-----------------
Confidence 4677889999999999999999999999992 388555 5567777777766554432111
Q ss_pred CCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-------
Q 009538 77 PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS------- 149 (532)
Q Consensus 77 ~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~------- 149 (532)
+...+..+++.-++.+.+..+......++.+|+.++. ++|++..++.....++|..+++.+...+..
T Consensus 105 -~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~-----~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~ 178 (444)
T PRK09669 105 -ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDP-----RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDE 178 (444)
T ss_pred -cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 1134566666666777666666666778888876432 233456777777788887777664333221
Q ss_pred cccchhhhHHHHHHHHHHHH
Q 009538 150 DVSWAWGLGIPAFMMFLSCA 169 (532)
Q Consensus 150 ~~gw~~~F~v~~~~~~l~~~ 169 (532)
..+|+..+.+.+++..+..+
T Consensus 179 ~~g~~~~~~i~~ii~~v~~~ 198 (444)
T PRK09669 179 QKGYFYAMMVMGLLGVVLFF 198 (444)
T ss_pred hhhHHHHHHHHHHHHHHHHH
Confidence 34788777776665444433
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.57 E-value=2e-12 Score=134.17 Aligned_cols=126 Identities=11% Similarity=0.129 Sum_probs=83.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhccc
Q 009538 352 ITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQF 431 (532)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~ 431 (532)
++..+.+.++.+..++=..+++...+ +........+....+.|+..++...+...|+.+.+
T Consensus 270 ~g~~~ll~~a~~~~~vR~~l~a~~~~-------------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~ 330 (400)
T PF03825_consen 270 FGIKWLLLLALVAYAVRWLLYAYFSD-------------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIA 330 (400)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcC-------------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC
Confidence 44556777777777666666665410 00011122233345789999999999999999999
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 009538 432 PENMRSIGGSLAFV-GFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAK 506 (532)
Q Consensus 432 P~~~rg~~~gl~~~-~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~ 506 (532)
|++.|+++++++.. ...+|..++..+.|++.|..+..... .+..++.+.+++.++..+.+++..|
T Consensus 331 p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~----------~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 331 PPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF----------DWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred CccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh----------hHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999865 57899999999999998865432211 1233455555555666666665544
No 108
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.56 E-value=2e-12 Score=134.33 Aligned_cols=145 Identities=9% Similarity=-0.038 Sum_probs=89.7
Q ss_pred chhhhHHH--HHHHHHHHHHHHhHH-HHHhhccccchHHHHHHHHHHHH-HHHHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTL--INIFSGTTNFATLLG-AFLSDTYFGRYKTLGFASVASFL-GMLVLSLTAAISKLHPPDCGNQDSGACPGP 77 (532)
Q Consensus 2 ~~~~~~~i--~~~~~~~~~~~~l~~-G~laD~~~Grr~~l~~~~~~~~i-g~il~~~a~~~~~~~~~~~~~~~~~~~~~~ 77 (532)
|+++.+.+ .+.......+.+++. ++..||+ ||||..++.+.+... .....+... +.
T Consensus 34 ~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~~~~~~~~~~~~--~~----------------- 93 (390)
T TIGR02718 34 PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLVSACLASLALVG--PD----------------- 93 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHHHHHHHHHHcCC--cc-----------------
Confidence 55666775 345566666666666 6689995 999997666533222 122222110 00
Q ss_pred CchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhh
Q 009538 78 TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 78 ~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F 157 (532)
......++..-.+.++..+...+....+..|..++ ++++...+....+..+|.++|+...+++.+++|||..|
T Consensus 94 -~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~------~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f 166 (390)
T TIGR02718 94 -VAGAGWAVGLLACASLASATQDIATDGMAAEHFNG------RTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAF 166 (390)
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 01123344555556667777777777776665321 23344556666777889999988888999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 009538 158 GIPAFMMFLSCAMFFL 173 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~ 173 (532)
++.++..++..+..+.
T Consensus 167 ~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 167 LLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988776655554433
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.56 E-value=2.3e-13 Score=143.27 Aligned_cols=327 Identities=14% Similarity=0.125 Sum_probs=200.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhh----ccccchHHHH-HHHHHHHHHHHHHHHH-h-hcccCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSD----TYFGRYKTLG-FASVASFLGMLVLSLT-A-AISKLHPPDCGNQDSGAC 74 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD----~~~Grr~~l~-~~~~~~~ig~il~~~a-~-~~~~~~~~~~~~~~~~~~ 74 (532)
++...+.+..+..+..++..|+.|+++| |+ ||||.++ ++.++.+++.+++... + +.+.
T Consensus 35 ~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~-------------- 99 (428)
T PF13347_consen 35 SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLLFSPPPAGLSF-------------- 99 (428)
T ss_pred CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHhhccccchhhh--------------
Confidence 5667788888888888999999999999 75 9876655 6777888877777654 2 1110
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc---
Q 009538 75 PGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV--- 151 (532)
Q Consensus 75 ~~~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~--- 151 (532)
......+++.-++..++.........+++.|..++.+ +|.+..+.-....++|.++...+.+.+.+..
T Consensus 100 ----~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~ 170 (428)
T PF13347_consen 100 ----TAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGG 170 (428)
T ss_pred ----hhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccC
Confidence 0134456777777799999998889999999865432 3345777777778888876656655544221
Q ss_pred ----cchhhhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCC
Q 009538 152 ----SWAWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKL 227 (532)
Q Consensus 152 ----gw~~~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (532)
+|++..++.+++.++..++.+...|+..++.++.++.
T Consensus 171 ~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~--------------------------------------- 211 (428)
T PF13347_consen 171 DTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKK--------------------------------------- 211 (428)
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccc---------------------------------------
Confidence 6888888877766665555444333300000000000
Q ss_pred CCCCcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccch---hhhhhhhccC
Q 009538 228 PHTGQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQT---YVVFQALQSD 304 (532)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 304 (532)
.++++..+...++ |.....+ +.....+.......+ ++.......+
T Consensus 212 ----------------------------~~~~~~~~~~~~n-r~~~~l~---~~~~~~~~~~~~~~~~~~y~~~~vl~~~ 259 (428)
T PF13347_consen 212 ----------------------------ISLRDSLRSLFRN-RPFRILL---LAFFLQWLAFALMNTFLPYYFTYVLGNE 259 (428)
T ss_pred ----------------------------cccccchhhhccc-chHHHHH---HHHHHHHhhhhhhhhHHHHHHHHHhcCc
Confidence 0000000001111 1111111 111222222211111 1111111111
Q ss_pred cccCCccceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009538 305 RRVGNTHFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLAL 384 (532)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (532)
. ..+.+.....+..++..|+..++ .+|+++| +.+..+..+.+++.++..+..
T Consensus 260 -~--------~~~~~~~~~~~~~~v~~~~~~~l----~~r~gk~-------~~~~~~~~~~~~~~~~~~~~~-------- 311 (428)
T PF13347_consen 260 -G--------LISIFMLIFFVASIVGSPLWGRL----SKRFGKK-------KVYIIGLLLAALGFLLLFFLG-------- 311 (428)
T ss_pred -h--------hhHHHHHHHHHHHHHHHHHHHHH----HHHccce-------eehhhhHHHHHHHHHHHHHHH--------
Confidence 1 11233334455556666664444 7777666 567778888777777666552
Q ss_pred cCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccC-------chhHHHHHHHHHHHHHHHHHHHHHH
Q 009538 385 SRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFP-------ENMRSIGGSLAFVGFAISNYLNGFL 457 (532)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl~~~~~~ig~~l~~~~ 457 (532)
..+.++..+..++.+++.+......+++.+|..+ ++..|...|++++...++..+++.+
T Consensus 312 --------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 312 --------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred --------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 1467888888899999999998899999998877 3557999999999999999999999
Q ss_pred HHHhcccc
Q 009538 458 ISMVHRFT 465 (532)
Q Consensus 458 ~~~~~~~~ 465 (532)
.+.+.+..
T Consensus 378 ~g~~l~~~ 385 (428)
T PF13347_consen 378 VGLLLALV 385 (428)
T ss_pred HHHHHHHh
Confidence 99988764
No 110
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.52 E-value=5.4e-12 Score=124.07 Aligned_cols=313 Identities=15% Similarity=0.161 Sum_probs=205.5
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|.++++.+++.=.+...+.+++..+|+.|+ |-++.+..++++.++|.++=...
T Consensus 44 ls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~------------------------- 97 (395)
T COG2807 44 LSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG------------------------- 97 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-------------------------
Confidence 4678899999999999999999999999995 99999999999999999986654
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc-cchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-SWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~-gw~~~F~v 159 (532)
+...++.+-.+.|.|.+......++++.+.||+ +.+..++.|....+.|+++++.+...+.++. |||....+
T Consensus 98 ~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-------~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~ 170 (395)
T COG2807 98 GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-------RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGF 170 (395)
T ss_pred cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-------chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHH
Confidence 245799999999999999999999999999973 2245899999999999999999999998887 79998888
Q ss_pred HHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhh
Q 009538 160 PAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKA 239 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (532)
=+...++++++++.-..+.+ .+..+. +..
T Consensus 171 WAl~allAl~~WlPq~~r~~--~~~~~~-------------------~~~------------------------------ 199 (395)
T COG2807 171 WALLALLALLIWLPQALREQ--AASIAT-------------------KLV------------------------------ 199 (395)
T ss_pred HHHHHHHHHHHHhhhccccc--cccccc-------------------ccc------------------------------
Confidence 77777777776665432211 000000 000
Q ss_pred cccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChhhh
Q 009538 240 AIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAASY 319 (532)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (532)
....-| ++.......+.+-..+..++..+.+++..+..+.. +... .+.+
T Consensus 200 -------------~~~~vw--------~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~--sa~~--------aG~l 248 (395)
T COG2807 200 -------------SVRKVW--------RSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGL--SAAE--------AGSL 248 (395)
T ss_pred -------------cccccc--------cCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CHHH--------hhhH
Confidence 000011 01111112334445666677777777776654432 2111 1111
Q ss_pred hhhh---hhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 320 AIFS---MLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 320 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
..+. .+..-+.+|. +.+|..++ +...+....++.++.+.+.+.
T Consensus 249 lsl~~l~~~~~~ll~P~-------la~R~~n~------r~~~~~~~~~~l~G~~G~~~~--------------------- 294 (395)
T COG2807 249 LSLMQLAQLPTALLIPL-------LARRSKNQ------RPLVVLALLLMLVGLVGLLLA--------------------- 294 (395)
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHhccc------chHHHHHHHHHHHHHHHHHHh---------------------
Confidence 1111 1222223333 24442222 233444444444555444443
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPEN-MRSIGGSLAFVGFAISNYLNGFLISMVHRFTK 466 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~-~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~ 466 (532)
+.+..++| .+++|+|.+..++....++...+.+. ..+.-.|+.+....+-...+|.+.|.++|.++
T Consensus 295 P~~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 295 PGQLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred hhhHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 12233444 37789998888888888887776554 44555566676777777789999999999764
No 111
>PRK11462 putative transporter; Provisional
Probab=99.38 E-value=1.4e-10 Score=123.17 Aligned_cols=144 Identities=13% Similarity=0.143 Sum_probs=93.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhcc---ccchHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTY---FGRYKTLG-FASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGP 77 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~---~Grr~~l~-~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~ 77 (532)
++..++.+..+--+.-++.-|+.|+++||. |||||..+ ++.+.++++.+++-..+..+
T Consensus 43 ~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s------------------ 104 (460)
T PRK11462 43 PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLS------------------ 104 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCC------------------
Confidence 456667777777777889999999999962 59987766 45577777766554432111
Q ss_pred CchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-------
Q 009538 78 TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD------- 150 (532)
Q Consensus 78 ~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~------- 150 (532)
+...+..+++.-++..++..+....-.++..|..++ .++|++..++...+.++|.++++.+...+...
T Consensus 105 ~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d-----~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~ 179 (460)
T PRK11462 105 MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND-----PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKP 179 (460)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 112244566666666777777777688888887543 24456788888888898888877665443322
Q ss_pred ccchhhhHHHHHHHHHHH
Q 009538 151 VSWAWGLGIPAFMMFLSC 168 (532)
Q Consensus 151 ~gw~~~F~v~~~~~~l~~ 168 (532)
.+|+....+.+++.++..
T Consensus 180 ~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 180 LGFQGGIAVLSVVAFMML 197 (460)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 356766655555444433
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.36 E-value=3.8e-11 Score=122.90 Aligned_cols=354 Identities=10% Similarity=0.015 Sum_probs=187.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHH--HH-HHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFL--GM-LVLSLTAAISKLHPPDCGNQDSGACPGP 77 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~i--g~-il~~~a~~~~~~~~~~~~~~~~~~~~~~ 77 (532)
+|.++.|.+.++..+...+.+|+.|.++||. |.||-++..+.+..+ +. ....+.+.+..
T Consensus 40 Ls~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l~~pff~~v~~pll~~----------------- 101 (412)
T PF01306_consen 40 LSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLLFGPFFIYVFGPLLQS----------------- 101 (412)
T ss_dssp --HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHTCHHHHHHTHHHHHHT-----------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 4678999999999999999999999999995 988876655443322 22 22233321110
Q ss_pred CchhHHHHHHHHHHHHH----hccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccc
Q 009538 78 TPWQLAFLFTGLGLMVI----GAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSW 153 (532)
Q Consensus 78 ~~~~~~~l~~~r~l~G~----g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw 153 (532)
| +.++-++.|+ ......|+..+|..+. . |+ .+-=++---+-..+|.+++..++|++.. .+-
T Consensus 102 ---n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~-s----r~---~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p 166 (412)
T PF01306_consen 102 ---N---FWLGAIIGGIYLGLVFNAGVPLSEAYAERV-S----RR---NGFEYGRARMWGSIGFAIASLLAGILFN-INP 166 (412)
T ss_dssp ---T----HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-H----HH---HSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred ---H---HHHHHHHHHHHHHHHHcccchHHHHHHHHH-H----HH---hcCCcchHHHHhhHHHHHHHHHhheeee-eCc
Confidence 1 2233333333 3333345455544443 1 11 1112334445678888889999998875 556
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcc
Q 009538 154 AWGLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQF 233 (532)
Q Consensus 154 ~~~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (532)
+..||+.....++..++.+..+|..++..+..+ .. .. + .++.
T Consensus 167 ~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~----------------------~~----------~~--~----~~~~ 208 (412)
T PF01306_consen 167 NIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD----------------------AL----------GA--K----KDKV 208 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS---SSSSS-SST----------------------TS----------SS-----------
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc----------------------cc----------cc--C----CCCC
Confidence 788887665544444443433332111000000 00 00 0 0000
Q ss_pred cchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccce
Q 009538 234 RCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFK 313 (532)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (532)
+..+. .+.-..|++...+.+.......+..+.|+...+..... .+...|
T Consensus 209 ~~~~~-------------------------~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f-~~~~~g----- 257 (412)
T PF01306_consen 209 SLKDV-------------------------LSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF-QSAGQG----- 257 (412)
T ss_dssp -HHHH-------------------------HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SSHHHH-----
T ss_pred cHHHH-------------------------HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccC-----
Confidence 00000 01111222322333333333333333333332221110 011111
Q ss_pred eChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccc
Q 009538 314 IPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQR 393 (532)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (532)
+..+..++.+....=.+++. +..++.+|++ +.+.+.++..++++=...++..
T Consensus 258 --~~~~G~l~s~~v~~E~~~m~-~~p~li~rig-------~k~~Lllag~i~~iRi~~~~~~------------------ 309 (412)
T PF01306_consen 258 --NQMYGYLWSVQVFLEALMMF-FSPWLINRIG-------AKNLLLLAGVIMAIRIIGSGFA------------------ 309 (412)
T ss_dssp --HHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHT-------------------
T ss_pred --hhHHhHHHHHHHHHHHHHHH-HHHHHHHhcC-------hHhHHHHHHHHHHHHHHHHhhh------------------
Confidence 22222333332222111110 0112255544 3356666666666666666654
Q ss_pred CCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHH-HHHHHHHHHHHHHHHHHhcccccCCCCCC
Q 009538 394 RGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLA-FVGFAISNYLNGFLISMVHRFTKGASTGD 472 (532)
Q Consensus 394 ~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~-~~~~~ig~~l~~~~~~~~~~~~~~~~~~~ 472 (532)
.+++++++.-.+.++-..+...+..-|+.+.+|++..++...+. ++...+|..+.+.+.|.+.|..
T Consensus 310 ------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~------- 376 (412)
T PF01306_consen 310 ------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI------- 376 (412)
T ss_dssp -------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-------
T ss_pred ------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-------
Confidence 46778888889999988888889999999999999999998885 7889999999999999998854
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 009538 473 WLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAK 506 (532)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~ 506 (532)
++...|++++++.++..+.-.+..+
T Consensus 377 ---------G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 377 ---------GFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred ---------CcHHHHHHHHHHHHHHHHHheeeec
Confidence 3556888888777666665555443
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.36 E-value=1.6e-09 Score=109.38 Aligned_cols=325 Identities=11% Similarity=0.094 Sum_probs=190.0
Q ss_pred HHHhHHHHHhhcccc-----chHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009538 19 FATLLGAFLSDTYFG-----RYKT-LGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLM 92 (532)
Q Consensus 19 ~~~l~~G~laD~~~G-----rr~~-l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 92 (532)
...+..|+.+|+. + ||.- ++.|.+++..|..+..++.-.-+ . +.....++.+.......++-.+.
T Consensus 29 p~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~--~------~~~~~~~~~~~g~~~a~l~F~l~ 99 (403)
T PF03209_consen 29 PLRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA--E------SGQQSSGPFWLGLALAALAFLLY 99 (403)
T ss_pred HHHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc--c------cccccccccHHHHHHHHHHHHHH
Confidence 3678899999997 7 5544 45567777777777777542111 0 00001223334556677788889
Q ss_pred HHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHH----HHHHHHHHH
Q 009538 93 VIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI----PAFMMFLSC 168 (532)
Q Consensus 93 G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v----~~~~~~l~~ 168 (532)
|+|.+.......++++|..+|+ +|.+..++.|.+..+|.+++.++.+.+.+.++-.-...+ ..+...+.+
T Consensus 100 G~G~~~s~T~~lALl~D~~~e~------~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ 173 (403)
T PF03209_consen 100 GLGVHASGTSFLALLADLAPEE------RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNL 173 (403)
T ss_pred HhhHhHhHHHHHHHHHhcCCHh------hhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987653 234589999999999999999999988776654333222 222333333
Q ss_pred HHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcccCCcccc
Q 009538 169 AMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAIMTPEDQI 248 (532)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (532)
+..|-.+++.++..+..+ +++..+.+.
T Consensus 174 ia~wg~E~r~~~~~~~~~-------------------------------------------~~~~~f~~a---------- 200 (403)
T PF03209_consen 174 IALWGQEPRRSRRAAAAE-------------------------------------------RPRPPFREA---------- 200 (403)
T ss_pred HHHHhcccCCcccccCCC-------------------------------------------CCCccHHHH----------
Confidence 333333333221110000 000001100
Q ss_pred cCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCcccee-Chhhhhhhhhhhh
Q 009538 249 KSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKI-PAASYAIFSMLGL 327 (532)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 327 (532)
|++... + .+.++++.. +++....+.+.- ..+-.... +.++ +.+ .+..++.....+.
T Consensus 201 ---------~~~~~~-~-~~a~~f~~f--l~l~t~a~~~QD----~iLEPygg---~Vfg---msv~eTT~Lta~~~~G~ 257 (403)
T PF03209_consen 201 ---------WRQVWA-S-PQARRFFVF--LFLGTLAFFMQD----VILEPYGG---EVFG---MSVGETTRLTAFWGGGT 257 (403)
T ss_pred ---------HHHHHh-C-CChhHHHHH--HHHHHHHHHhhH----HHcCCchh---HHcC---CCHHHHHHHHHHHHHHH
Confidence 000000 0 011222111 111122222211 11111111 1111 111 1334455556666
Q ss_pred HhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHH
Q 009538 328 TIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIP 407 (532)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 407 (532)
+++..+.+++.. ++ .++.+...+|..++.+++....... ...+.+.+..
T Consensus 258 L~G~~~~g~~l~---~~-------~~~~~~a~~G~~~~~~~f~lii~a~---------------------~~~~~~~~~~ 306 (403)
T PF03209_consen 258 LLGMLLAGFLLS---RR-------LGKKRTAALGCLLGALAFALIILAG---------------------PLGSPWLFRP 306 (403)
T ss_pred HHHHHHHHHHhc---CC-------CCchHHHHHHHHHHHHHHHHHHHHH---------------------hcccchHHHH
Confidence 666666555422 12 2223455567777777765544431 1235677788
Q ss_pred HHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 009538 408 QLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFT 465 (532)
Q Consensus 408 ~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~ 465 (532)
..+++|++.++......+...+..+++..|..+|.|...+.++..++..+.+.+.|..
T Consensus 307 ~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 307 GVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999875
No 114
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.30 E-value=6e-12 Score=109.66 Aligned_cols=133 Identities=14% Similarity=0.137 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 009538 10 INIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGL 89 (532)
Q Consensus 10 ~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 89 (532)
.+.+.++..++.++.|+++||+ |||+.+..+..+..++.+++.++. +++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~ 58 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS------------------------NITVLIIAR 58 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc------------------------cHHHHHHHH
Confidence 3456778889999999999996 999999999999999988887763 467788899
Q ss_pred HHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHH
Q 009538 90 GLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCA 169 (532)
Q Consensus 90 ~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~ 169 (532)
++.|++.+...+....++.|.+|++ .|++..+..+...++|..++|.+.+++.+..+|++.|++..+..++..+
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPPE------ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCChh------hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988753 2345799999999999999999999999989999999987776555554
Q ss_pred HHHh
Q 009538 170 MFFL 173 (532)
Q Consensus 170 ~~~~ 173 (532)
..+.
T Consensus 133 ~~~~ 136 (141)
T TIGR00880 133 LLAF 136 (141)
T ss_pred HHhh
Confidence 4433
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=1e-08 Score=108.72 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.|.+.+.-++.|+..+...+.+-++.++..|+...+...|++.++...++.+||.+.+.+.+.+++
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~------------- 445 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS------------- 445 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------
Confidence 4455555667789999999999999999999999999999999999999999999999999887632
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLL 503 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~ 503 (532)
..+.+..+.++.+++++++..
T Consensus 446 --~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 446 --QRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred --chhHHHHHHHHHHHHHHHHhh
Confidence 223455555666666665543
No 116
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.26 E-value=2.7e-10 Score=114.52 Aligned_cols=81 Identities=6% Similarity=-0.153 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc----------
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD---------- 150 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~---------- 150 (532)
++..++++-++.|.|.+..++..++|+++..++++. ++.+++.+....+|..+||++++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~------~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETA------ASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchH------HHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 688999999999999999999999999998775432 2359999999999999999998876521
Q ss_pred ------ccchhhhHHHHHHHHHH
Q 009538 151 ------VSWAWGLGIPAFMMFLS 167 (532)
Q Consensus 151 ------~gw~~~F~v~~~~~~l~ 167 (532)
.+|+++|++-+.+.++.
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~ 105 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVL 105 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Confidence 47999999655543333
No 117
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.24 E-value=3.5e-09 Score=109.76 Aligned_cols=331 Identities=13% Similarity=0.125 Sum_probs=186.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhcc---ccchH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTY---FGRYK-TLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGP 77 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~---~Grr~-~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~ 77 (532)
++..++.+..+-=+--++.-|+.|.+.||. ||||| =++.+.+.+++.+.++-.++....
T Consensus 46 s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~----------------- 108 (467)
T COG2211 46 SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSM----------------- 108 (467)
T ss_pred cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCccc-----------------
Confidence 445566666666666778899999999964 59855 456666888888888887752110
Q ss_pred CchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc-----c--c
Q 009538 78 TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ-----S--D 150 (532)
Q Consensus 78 ~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~-----~--~ 150 (532)
..+....++.-++.+++...+.....++.+++.+. + ++|.+..++.....++|.++...+.+.+. + .
T Consensus 109 -~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d--~---~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~ 182 (467)
T COG2211 109 -TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD--P---QERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKA 182 (467)
T ss_pred -CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC--H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 12455666777788888877766677778887543 2 34466888889999999776655544432 2 3
Q ss_pred ccchhhhHHHHHHHHHHHHHHHh-hcceeeecCCCCC-chhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCC
Q 009538 151 VSWAWGLGIPAFMMFLSCAMFFL-GSRLYAKVKPEGS-PLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLP 228 (532)
Q Consensus 151 ~gw~~~F~v~~~~~~l~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (532)
.||+..-++-++...+..+..+. .++|..+.++.++ ...+....
T Consensus 183 ~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~---------------------------------- 228 (467)
T COG2211 183 LGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDS---------------------------------- 228 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHH----------------------------------
Confidence 46666555544433333332222 2223221111110 00000000
Q ss_pred CCCcccchhhhcccCCcccccCCCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhh-hccCccc
Q 009538 229 HTGQFRCLDKAAIMTPEDQIKSDGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQA-LQSDRRV 307 (532)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 307 (532)
.....+ .|.++..+.+. .+.+...+...+...+.. ..++..
T Consensus 229 ---------------------------------~~~~~~-Nrp~~~~l~~~---l~~~~~~~i~~s~~~yy~~y~lg~~- 270 (467)
T COG2211 229 ---------------------------------FLLIFK-NRPLLLLLLMN---LLLFIAFNIRGSIMVYYVTYVLGDP- 270 (467)
T ss_pred ---------------------------------HHHHHc-cchHHHHHHHH---HHHHHHHHHHhhhhheeEEEEcCCh-
Confidence 000001 11122222222 222222222222111111 111110
Q ss_pred CCccceeChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 009538 308 GNTHFKIPAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRP 387 (532)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (532)
...............+++.++..+ +.+|+++| +...++.++..++.+..-+.
T Consensus 271 -----~l~~~~~~~~~~~~~l~~~~~~p~----L~~~~gkk-------~~~~~~~~~~~i~~~~~~f~------------ 322 (467)
T COG2211 271 -----ELFAYLLLLASGAGLLIGLILWPR----LVKKFGKK-------KLFLIGLLLLAVGYLLLYFT------------ 322 (467)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhHHH----HHHHhchH-------HHHHHHHHHHHHHHHHHHhh------------
Confidence 011122222233333333444222 35555555 67777877777776666654
Q ss_pred CcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhccc-------CchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009538 388 VGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQF-------PENMRSIGGSLAFVGFAISNYLNGFLISM 460 (532)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~-------P~~~rg~~~gl~~~~~~ig~~l~~~~~~~ 460 (532)
+..+.+..++..++.++|.+...+..|+++.|.. -++..|...|.+.+++-+|..++..+.++
T Consensus 323 ----------~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 323 ----------PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred ----------cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234566666778889999999999999888754 45667888999999999999999999999
Q ss_pred hcccc
Q 009538 461 VHRFT 465 (532)
Q Consensus 461 ~~~~~ 465 (532)
+++..
T Consensus 393 ~L~~~ 397 (467)
T COG2211 393 ILGAI 397 (467)
T ss_pred HHHHc
Confidence 98765
No 118
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.22 E-value=9.5e-11 Score=110.98 Aligned_cols=122 Identities=16% Similarity=0.238 Sum_probs=96.6
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
++...+-+.|++--.+.+.++|++.||.+|-|..-++-+....+|.++.+.-- ...+++
T Consensus 79 akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg---------------------i~~aFw 137 (459)
T KOG4686|consen 79 AKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG---------------------ISHAFW 137 (459)
T ss_pred eeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch---------------------HHHHHH
Confidence 34556667788888899999999999999999888888888888888876531 124799
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS 152 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g 152 (532)
.+.++|++.|+|.-..-.+-+.|..-+|+.. +++-.+++......+|..+-..+.+++-++.+
T Consensus 138 ~M~~GRF~FGIGgESlAVaQN~yav~wFKGK------ELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 138 TMLAGRFLFGIGGESLAVAQNKYAVYWFKGK------ELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHhhheeeccCchhhhhhhcceeEEEecCc------cccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 9999999999999888888899999998752 34557888888888888877667777655443
No 119
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.12 E-value=4.5e-10 Score=116.96 Aligned_cols=142 Identities=19% Similarity=0.142 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHH
Q 009538 5 TATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAF 84 (532)
Q Consensus 5 ~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (532)
+.+...+.+.++..++.++.|++.||+ ||||.+..+..+.+++.++..+.+ +...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~ 304 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP------------------------SPWM 304 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc------------------------cHHH
Confidence 345666778888889999999999996 999999999998888888777653 4556
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHH
Q 009538 85 LFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMM 164 (532)
Q Consensus 85 l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~ 164 (532)
+++.+++.|++.+...|.....+.|.+|+ +.+++.+++++...++|..+++.+.|++.++.||++.|++.++..
T Consensus 305 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 378 (399)
T PRK05122 305 ALIGAALTGFGFSLVFPALGVEAVKRVPP------QNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAA 378 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 77889999999998888877777887653 344678999999999999999999999999999999999988877
Q ss_pred HHHHHHHHhhcce
Q 009538 165 FLSCAMFFLGSRL 177 (532)
Q Consensus 165 ~l~~~~~~~~~~~ 177 (532)
+++.+..+...++
T Consensus 379 ~~~~~~~~~~~~~ 391 (399)
T PRK05122 379 LLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHhccc
Confidence 7766655554444
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.09 E-value=6.9e-10 Score=116.48 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=116.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
...+.+.++..+...++.++.|+++||+ |||+++.++.++.+++..+...+.. ++.++.
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~~~v~~~l~~~~~~--------------------~~~~~~ 309 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVAWALRFGFFAYGDP--------------------EYFGYA 309 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCc--------------------chhhHH
Confidence 3457777888888889999999999996 9999999999999998877776421 011345
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhH-HHHhHHHHHHHHhhhhcccc------ccchhh
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYY-FTFTFAMMISLTVIVYVQSD------VSWAWG 156 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~-~~~~~G~~~g~~~~g~i~~~------~gw~~~ 156 (532)
.+++.+++.|++.+...+....+++|++|+ +.+++.+++.+ ....+|.++||.++|++.++ +||+++
T Consensus 310 ~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~------~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~ 383 (418)
T TIGR00889 310 LLFLSMIVYGCAFDFFNISGSVFVEKEVPV------HIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTM 383 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHH
Confidence 678899999999999999999999999874 34467899987 56789999999999999876 579999
Q ss_pred hHHHHHHHHHHHHHHHhhcc
Q 009538 157 LGIPAFMMFLSCAMFFLGSR 176 (532)
Q Consensus 157 F~v~~~~~~l~~~~~~~~~~ 176 (532)
|.+.++..+++.+.++...+
T Consensus 384 f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 384 WLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99887766666555554443
No 121
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.06 E-value=2.1e-11 Score=130.78 Aligned_cols=171 Identities=15% Similarity=0.224 Sum_probs=3.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCC-CC------CCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHP-PD------CGNQDSGA 73 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~-~~------~~~~~~~~ 73 (532)
+++++.+++.+.|.++..+..++..+.++|. -|=|-+.+|.+++++|++++++-..+..-+. .. ..+.+...
T Consensus 35 l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~ 113 (539)
T PF03137_consen 35 LSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNL 113 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccc
Confidence 4678999999999999999999999999995 7778899999999999999998543332111 00 00112233
Q ss_pred C-------------------CCCCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHh
Q 009538 74 C-------------------PGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFT 134 (532)
Q Consensus 74 ~-------------------~~~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~ 134 (532)
| ......-+..|+++.++.|+|+....+...+|+-|..++++. ...+++++....
T Consensus 114 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~s------plYiGi~~~~~~ 187 (539)
T PF03137_consen 114 CDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNS------PLYIGILYAMSI 187 (539)
T ss_dssp --------------------------------------SSS---------------------------------------
T ss_pred ccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccC------ccchhhhhHHhh
Confidence 3 111112478899999999999999999999999998775432 347899999999
Q ss_pred HHHHHHHHhhhhcccc---------------------c-cchhhhHHHHHHHHHHHHHHHhhccee
Q 009538 135 FAMMISLTVIVYVQSD---------------------V-SWAWGLGIPAFMMFLSCAMFFLGSRLY 178 (532)
Q Consensus 135 ~G~~~g~~~~g~i~~~---------------------~-gw~~~F~v~~~~~~l~~~~~~~~~~~~ 178 (532)
+|.++|.++++..... . -|+..|++.+++.++..+.++.+.++.
T Consensus 188 lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 188 LGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp ------------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 9999999998875421 1 277777777666555555444443343
No 122
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.03 E-value=1.4e-09 Score=114.15 Aligned_cols=139 Identities=8% Similarity=-0.009 Sum_probs=112.0
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
.+.+.+.+++.+...++.+++|+++||+ |||+.+..+..+.+++.++.++++ +.+
T Consensus 262 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~------------------------~~~ 316 (420)
T PRK09528 262 RVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT------------------------GPL 316 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc------------------------cHH
Confidence 4567888888888889999999999995 999999999999999988888764 455
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhh-hHHHHhHHHHHHHHhhhhccccccchhhhHHHHH
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNW-YYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAF 162 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~-~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~ 162 (532)
.+++.+++.|++.+...+....++.|.+|++. +++..+. +.....+|.++||.++|++.+.+||+..|.+.++
T Consensus 317 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~ 390 (420)
T PRK09528 317 EVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGG 390 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHH
Confidence 67888999999998888888888999886421 2234443 5667889999999999999999999999998777
Q ss_pred HHHHHHHHHHh
Q 009538 163 MMFLSCAMFFL 173 (532)
Q Consensus 163 ~~~l~~~~~~~ 173 (532)
..++..++.+.
T Consensus 391 ~~~i~~~~~~~ 401 (420)
T PRK09528 391 IVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHH
Confidence 66555544433
No 123
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.02 E-value=3e-08 Score=107.21 Aligned_cols=170 Identities=16% Similarity=0.228 Sum_probs=122.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCC-----------------
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHP----------------- 63 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~----------------- 63 (532)
+++.+.+++.+.|.++..+...+..|.+-|. =|=|.+-+|++++++|++++++-..+..-..
T Consensus 129 i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~ 207 (735)
T KOG3626|consen 129 ISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSL 207 (735)
T ss_pred CCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCcccc
Confidence 3567789999999999999999999999995 7888999999999999999998522111000
Q ss_pred -CCCCCCCCCCCCCCCc---------h-hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHH
Q 009538 64 -PDCGNQDSGACPGPTP---------W-QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFT 132 (532)
Q Consensus 64 -~~~~~~~~~~~~~~~~---------~-~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~ 132 (532)
..+.+++...|-...+ . -+..++++.++.|+|.....|...+|+-|...+.+ . ...+++.+.+
T Consensus 208 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~-S-----plYlgi~~~~ 281 (735)
T KOG3626|consen 208 SFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKN-S-----PLYLGILYSM 281 (735)
T ss_pred chhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccC-C-----cHHHHHHHHH
Confidence 0111111223322111 1 35588999999999999999999999999654322 2 3478999999
Q ss_pred HhHHHHHHHHhhhhcccc---c----------------cchhhhHHHHHHHHHHHHHHHhhcce
Q 009538 133 FTFAMMISLTVIVYVQSD---V----------------SWAWGLGIPAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 133 ~~~G~~~g~~~~g~i~~~---~----------------gw~~~F~v~~~~~~l~~~~~~~~~~~ 177 (532)
..+|.++|.++|++.... + -|+..|++.+.+.++..+.++.+.+.
T Consensus 282 ~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 282 AILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred HHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999999999986421 1 27778888777777666655554444
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.01 E-value=2e-09 Score=110.24 Aligned_cols=137 Identities=15% Similarity=0.171 Sum_probs=112.8
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+.+.++..++.+++|+++||+ |||+.+.++.++..++.++..+.++. +
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~ 294 (377)
T TIGR00890 238 SDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMAAMLFIPML----------------------N 294 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHcccc----------------------h
Confidence 456678888999999999999999999996 99999999999999988887765321 1
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...++...++.|++.|...+..+.++.|.+|++ .+++.+++++...++|..++|.+.|++.++.||++.|.+.+
T Consensus 295 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~ 368 (377)
T TIGR00890 295 DVLFLATVALVFFTWGGTISLFPSLVSDIFGPA------NSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTG 368 (377)
T ss_pred hHHHHHHHHHHHHHhccchhccHHHHHHHhhhh------hhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Confidence 233556678889999988888888999988753 23458999999999999999999999999999999999877
Q ss_pred HHHHHH
Q 009538 162 FMMFLS 167 (532)
Q Consensus 162 ~~~~l~ 167 (532)
+..+++
T Consensus 369 ~~~~~~ 374 (377)
T TIGR00890 369 AFALTS 374 (377)
T ss_pred HHHHHh
Confidence 765554
No 125
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.01 E-value=2.6e-09 Score=111.37 Aligned_cols=137 Identities=11% Similarity=-0.008 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHH
Q 009538 7 TTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLF 86 (532)
Q Consensus 7 ~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 86 (532)
+.+.+++.++..++.+..|+++||+ |||+.+..+.....++.+...+.+ +.+.++
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~ 315 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFVQ------------------------TPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHhc------------------------cHHHHH
Confidence 3445556677778889999999996 999999999888888777766653 355678
Q ss_pred HHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHH
Q 009538 87 TGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFL 166 (532)
Q Consensus 87 ~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l 166 (532)
+.+++.|++.+...|...+++.+..+++ .+++.++.++...++|..+||.++|++.++.||++.|++.+++.++
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~ 389 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQ------IAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLF 389 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcc------cceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 8999999999999998888887765432 2345789999999999999999999999999999999998887777
Q ss_pred HHHHHHhh
Q 009538 167 SCAMFFLG 174 (532)
Q Consensus 167 ~~~~~~~~ 174 (532)
+.+..+..
T Consensus 390 ~~~~~~~~ 397 (408)
T PRK09874 390 NAVYSWNS 397 (408)
T ss_pred HHHHHHHH
Confidence 66654443
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.00 E-value=3.1e-09 Score=110.63 Aligned_cols=139 Identities=14% Similarity=0.064 Sum_probs=107.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+++.+.+...+...++.+++|+++||+ |||+.+..+.+...+.......+. +
T Consensus 250 ~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 304 (393)
T PRK15011 250 PEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYAGMLMAH------------------------S 304 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHh------------------------h
Confidence 456677777777777778899999999996 999998887766665544443332 3
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...+++.+++.+++.|...+..+.+..|.+|+ + + ++..+.+....++|..+||.++|++.+++||++.|++..
T Consensus 305 ~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~-~-----g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~ 377 (393)
T PRK15011 305 PAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q-A-----GSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFAL 377 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C-c-----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 45677788888888887777777788887753 1 2 347888888899999999999999999999999999887
Q ss_pred HHHHHHHHHHH
Q 009538 162 FMMFLSCAMFF 172 (532)
Q Consensus 162 ~~~~l~~~~~~ 172 (532)
+..++++++.+
T Consensus 378 ~~~~~~~~~~~ 388 (393)
T PRK15011 378 VMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHH
Confidence 77766665544
No 127
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=5.1e-08 Score=98.89 Aligned_cols=120 Identities=12% Similarity=0.059 Sum_probs=90.2
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
..+-|...+|.+.+.....++=|+.|++ |-|.+.+++.++-++|+.+=..+. .|.+. +.++
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~-----------------~~f~ 139 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVP-----------------PLFR 139 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Ccccc-----------------ccch
Confidence 3456888899999999999999999995 999999999999999999988874 23222 2344
Q ss_pred --HHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc
Q 009538 84 --FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ 148 (532)
Q Consensus 84 --~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~ 148 (532)
..+.|..+.+.+.-.+.-...-+-+-||++.+ |..+.+.-.++..+|.++|.++.+.+.
T Consensus 140 ~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 140 RPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred hhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceec
Confidence 77788888888888877776777778888633 233455555566677777766666654
No 128
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.98 E-value=4.4e-09 Score=109.25 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=87.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccc-hHHHHHHHHHHHHHHHHH-HHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGR-YKTLGFASVASFLGMLVL-SLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Gr-r~~l~~~~~~~~ig~il~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++..|+++++..++.++..+..|+...|. |+ |+-++.+.++..+|.++. +.+. .|. .
T Consensus 70 ~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~s~ii~~~g~llY~~l~~-~~~-------------------~ 128 (488)
T KOG2325|consen 70 ATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIVSFLIAIIGNLLYLALAY-VPN-------------------G 128 (488)
T ss_pred cchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHHHHHHHHHHHHHHHHHHh-ccc-------------------c
Confidence 45569999999999999999999999996 86 888999999999999998 5543 221 1
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhh
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVY 146 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~ 146 (532)
..+.++++|++.|+|.|.... .-+|++|...++| |. ++++....+..+|..+||.+...
T Consensus 129 ~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~d-R~-----rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 129 VKYLMLVARILTGVGVGNFAV-LRAYIADASTVED-RP-----RAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred hHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccc-hH-----HHHHHhhhHHHHHHHHhHHHHHH
Confidence 577899999999999887655 7788888654432 22 25666555556666666665444
No 129
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.97 E-value=3e-09 Score=117.92 Aligned_cols=133 Identities=11% Similarity=0.018 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHH
Q 009538 8 TLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFT 87 (532)
Q Consensus 8 ~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 87 (532)
....+..++..++.+++|+++||+ |||++++++.++.+++.++.++++ +...+++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~------------------------s~~~ll~ 653 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN------------------------SESAMIA 653 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc------------------------cHHHHHH
Confidence 334455677888999999999995 999999999999999998888874 3445777
Q ss_pred HHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHH
Q 009538 88 GLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLS 167 (532)
Q Consensus 88 ~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~ 167 (532)
.+++.|+..++..+...++++|++|. +.|++++++.+....+|.++||.+++.+... +...+|++.+++.+++
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~ 726 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPS------DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACG 726 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 78888888888889999999999874 3456799999999999999999999987653 4567788777766665
Q ss_pred HHHHH
Q 009538 168 CAMFF 172 (532)
Q Consensus 168 ~~~~~ 172 (532)
.++.+
T Consensus 727 ~ll~~ 731 (742)
T TIGR01299 727 GLLAL 731 (742)
T ss_pred HHHHH
Confidence 55433
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.97 E-value=5.6e-09 Score=105.65 Aligned_cols=139 Identities=22% Similarity=0.272 Sum_probs=122.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYK-TLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~-~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++.+.+++...+.++..++.++.|++.||+ |||+ .+..+..+..++.++.....
T Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~------------------------ 263 (352)
T cd06174 209 SAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLLLALAP------------------------ 263 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHhc------------------------
Confidence 567788999999999999999999999996 9999 99999999999999888864
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+...+++..++.|++.+...+....++.|.+|+ +.|++.++.+....++|..++|.+.+++.+..+|++.|.+.
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~ 337 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPP------EARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLIL 337 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHH
Confidence 456788999999999999999999999998764 34467899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHH
Q 009538 161 AFMMFLSCAMF 171 (532)
Q Consensus 161 ~~~~~l~~~~~ 171 (532)
++..++..+..
T Consensus 338 ~~~~~i~~i~~ 348 (352)
T cd06174 338 AALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHh
Confidence 88777665543
No 131
>PRK12382 putative transporter; Provisional
Probab=98.97 E-value=3.2e-09 Score=110.31 Aligned_cols=137 Identities=17% Similarity=0.122 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 6 ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 6 ~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
.+.....+.++..++.++.|++.||+ ||||.+..+..+.+++.++..++. +...+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~ 305 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP------------------------TAWVA 305 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc------------------------cHHHH
Confidence 45566677777888999999999995 999999999999999888777653 45567
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHH
Q 009538 86 FTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMF 165 (532)
Q Consensus 86 ~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~ 165 (532)
+++.++.|++.+...|.....+.|.+++ +.|++.+++++...++|..+||.+.|++.++.||++.|.+.++..+
T Consensus 306 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~ 379 (392)
T PRK12382 306 LAGAALTGAGCSLIFPALGVEVVKRVPS------QVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAV 379 (392)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 7889999999998888888888887763 3346789999999999999999999999999999999999888777
Q ss_pred HHHHHHHh
Q 009538 166 LSCAMFFL 173 (532)
Q Consensus 166 l~~~~~~~ 173 (532)
++.++.+.
T Consensus 380 ~~~~~~~~ 387 (392)
T PRK12382 380 LGIIVTIL 387 (392)
T ss_pred HHHHHHHh
Confidence 66665443
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.97 E-value=4.7e-09 Score=107.92 Aligned_cols=139 Identities=15% Similarity=0.060 Sum_probs=109.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.......++.+++|+++||+ |||+++.++.+...+..++..+.+ +
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 287 (375)
T TIGR00899 233 PDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN------------------------S 287 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH------------------------H
Confidence 455667777776666777889999999996 999999988777666555544443 4
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
.+.+++.+++.|++.|...|....+..|.+|+ + +++.+++++...++|..+||.++|++.+..||+..|++.+
T Consensus 288 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~ 360 (375)
T TIGR00899 288 LWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAI 360 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 56677889999999998888888888887652 1 1357899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHH
Q 009538 162 FMMFLSCAMFF 172 (532)
Q Consensus 162 ~~~~l~~~~~~ 172 (532)
+..+++.++.+
T Consensus 361 ~~~~~~~~~~~ 371 (375)
T TIGR00899 361 VMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHh
Confidence 87766665543
No 133
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.92 E-value=5.2e-08 Score=102.35 Aligned_cols=311 Identities=15% Similarity=0.130 Sum_probs=185.7
Q ss_pred HHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009538 14 SGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMV 93 (532)
Q Consensus 14 ~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 93 (532)
.+...+.++.-|.++|+| |||..+........+..++..+.. ++.++ +.+
T Consensus 72 ~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~~-------------------------~~~~~----~~~ 121 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQG-------------------------YWFFL----LLG 121 (463)
T ss_pred HHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHHH-------------------------HHHhh----hcc
Confidence 456778999999999996 999999999999999999998873 23333 444
Q ss_pred Hhc--cccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHHH
Q 009538 94 IGA--GGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMF 171 (532)
Q Consensus 94 ~g~--g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~~ 171 (532)
+.. +++.....++++|..+.+ .|...+++.......+..++|.+++++.+..|.-..|.+..+..++..+..
T Consensus 122 l~g~~~~~~s~~~a~vadis~~~------~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~ 195 (463)
T KOG2816|consen 122 LSGGFSAIFSVGFAYVADISSEE------ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYM 195 (463)
T ss_pred cccchhhhhhhhhhheeeccchh------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 433 455777889999986532 345678888888889999999999999999999999999999888877766
Q ss_pred HhhcceeeecCCCCC-chhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccchhhhcccCCcccccC
Q 009538 172 FLGSRLYAKVKPEGS-PLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCLDKAAIMTPEDQIKS 250 (532)
Q Consensus 172 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (532)
+...|+...++.++. .. +.. .+ ... ......+
T Consensus 196 ~~~l~Esl~~~~~~~~~~-------------~~~-~~-------------~~~----~~~~~~~---------------- 228 (463)
T KOG2816|consen 196 LLFLPESLQEKERSDATL-------------REL-TP-------------GSL----DSSHVAD---------------- 228 (463)
T ss_pred hhccccccCccccccccc-------------ccc-CC-------------Ccc----cchhhhh----------------
Confidence 665555322211110 00 000 00 000 0000000
Q ss_pred CCCCCCCCccchhhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCccceeChh-------hhhhhh
Q 009538 251 DGSAINPWRLSSMQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKIPAA-------SYAIFS 323 (532)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 323 (532)
++.... ..+..|..+.++ +......+.-.....-. . .......++ +... ..+...
T Consensus 229 ------~~~~~~--~~~~~r~~l~l~--l~~~~~~~~~~~~~~~~-~--~~yl~~~f~-----w~~~~~s~~~~~~~~~~ 290 (463)
T KOG2816|consen 229 ------AFQSLT--KVGPDRLLLLLL--LVAFLSSLPEAGGASDV-L--LLYLKAKFG-----WNKKEFSDLLSLVSILG 290 (463)
T ss_pred ------hhhhhc--ccCCCccchHHH--HHHHHHHHHHhcCceeE-E--EEEEeeecC-----cCHHHHHHHHHHHHHHH
Confidence 000000 001111111111 11111111111111100 0 011112222 2211 222233
Q ss_pred hhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHH
Q 009538 324 MLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGL 403 (532)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (532)
.++.++..|++ ...++.| +.+..|+..-.+..++.++.+ ..|
T Consensus 291 ~i~~l~~~~~l-------~~~l~~~-------~~i~lGl~~~~~~~~~~af~~------------------------~~w 332 (463)
T KOG2816|consen 291 IISQLLLLPLL-------SSILGEK-------RLISLGLLSEFLQLLLFAFAT------------------------ETW 332 (463)
T ss_pred HHHHHHHHHHH-------HHHHhhh-------hHhhHHHHHHHHHHHHHHHhc------------------------cch
Confidence 33444444332 2233433 467788888888888888763 223
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 404 WLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 404 ~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
. ............+..|...++++....++.+|+.+++......+++.+++.+.+.+...
T Consensus 333 ~-~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 333 M-MFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred h-hhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 2 23334445556677888899999999999999999999999999999999998888544
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.88 E-value=3.5e-08 Score=105.86 Aligned_cols=133 Identities=13% Similarity=0.046 Sum_probs=99.5
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+++.+.+.++..++.+++|+++||+ |||+++.++..+..++.++...... .+
T Consensus 309 ~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 365 (496)
T PRK03893 309 DPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG----------------------AN 365 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc----------------------cH
Confidence 567889999999999999999999999995 9999999887777766655443321 13
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
.+.+.+..++.+.......+..+.++.|.+|++ .+++.+++++...++|..+||.++|++.+++||+..+.+.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~ 439 (496)
T PRK03893 366 VWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE------QRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLS 439 (496)
T ss_pred HHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH------HhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 334444444444433344566778888987642 33567999999999999999999999999999998886655
Q ss_pred HH
Q 009538 162 FM 163 (532)
Q Consensus 162 ~~ 163 (532)
..
T Consensus 440 ~~ 441 (496)
T PRK03893 440 FS 441 (496)
T ss_pred HH
Confidence 43
No 135
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.87 E-value=2e-08 Score=103.93 Aligned_cols=136 Identities=12% Similarity=0.168 Sum_probs=106.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.++..++.++.|++.||+ |||+++..+..+..++.++.. ..
T Consensus 233 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~------------------------- 285 (381)
T PRK03633 233 SDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ------------------------- 285 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh-------------------------
Confidence 456678888899999999999999999996 999999998888887765543 11
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
..+.....+.|++.+...|.....+.|..|++ .++...+.+....++|.++||.++|++.++.+|++.|.+.+
T Consensus 286 -~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~ 358 (381)
T PRK03633 286 -AAMAPALFILGAAGFTLYPVAMAWACEKVEHH------ELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIA 358 (381)
T ss_pred -HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 12345677788888888899998888876542 11235666677889999999999999999999999999977
Q ss_pred HHHHHHHHHH
Q 009538 162 FMMFLSCAMF 171 (532)
Q Consensus 162 ~~~~l~~~~~ 171 (532)
...++..+..
T Consensus 359 ~~~l~~~~~~ 368 (381)
T PRK03633 359 SVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHH
Confidence 7766555443
No 136
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.86 E-value=3.7e-08 Score=105.68 Aligned_cols=140 Identities=12% Similarity=0.049 Sum_probs=96.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSL-TAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
..+...+...+.++..++.+++|+++||+ |||+++..+.++..++.+.+.. ..+ .+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 341 (490)
T PRK10642 285 EDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFVLAIPAFILINS----------------------NV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhC----------------------CC
Confidence 44556667777888889999999999996 9999999888766554443222 110 13
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc-cchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-SWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~-gw~~~F~v~ 160 (532)
...++++|++.|++.+...+....++.|.+|++ .|++.++..+....++..++|.+.+++.+.. +|+.++++.
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~------~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~ 415 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTH------IRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYL 415 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 566788999998887776666777888888752 2345677655556666778889989887654 477666655
Q ss_pred HHHHHHHHHHH
Q 009538 161 AFMMFLSCAMF 171 (532)
Q Consensus 161 ~~~~~l~~~~~ 171 (532)
.+..++.++..
T Consensus 416 ~~~~~i~~~~~ 426 (490)
T PRK10642 416 MVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHH
Confidence 54444444433
No 137
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.83 E-value=2.3e-07 Score=97.69 Aligned_cols=134 Identities=15% Similarity=0.037 Sum_probs=97.2
Q ss_pred HHHhHHHHHhhcc--cc--chHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009538 19 FATLLGAFLSDTY--FG--RYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVI 94 (532)
Q Consensus 19 ~~~l~~G~laD~~--~G--rr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 94 (532)
..-++.|.++|.+ +| ||.=++++.++..++.+.++.-+... .+.....+.-++..+
T Consensus 39 ~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~--------------------~s~~~~~~~l~la~~ 98 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE--------------------SSAAIAVVLLFLASF 98 (433)
T ss_pred HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc--------------------chhhhHHHHHHHHHH
Confidence 4677889999996 34 44555666666666666665543211 234556667788899
Q ss_pred hccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHHHHhh
Q 009538 95 GAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFLG 174 (532)
Q Consensus 95 g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~~~~~ 174 (532)
|.+....++.+.+.|... +++. .++...+..+....+|.+++..++|.+.+..++++.|.+.+++..+.++..+..
T Consensus 99 g~a~~DV~aDa~vvE~~~-~~p~---~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 99 GYAFADVAADALVVELAR-REPE---SRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred HHHHHHHhhhHHHHHHhh-cCCc---hhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHh
Confidence 999999999999999743 3322 256788899999999999999999999999999999999887666555444443
Q ss_pred cc
Q 009538 175 SR 176 (532)
Q Consensus 175 ~~ 176 (532)
.+
T Consensus 175 ~~ 176 (433)
T PF03092_consen 175 LE 176 (433)
T ss_pred hh
Confidence 33
No 138
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.82 E-value=2.5e-08 Score=104.55 Aligned_cols=145 Identities=9% Similarity=0.005 Sum_probs=116.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.++..++.+++|++.||. ++++.+..+.++.+++.++..+++ +
T Consensus 257 ~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------------------------~ 311 (417)
T PRK10489 257 GAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------------------------M 311 (417)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc------------------------h
Confidence 456788889999999999999999999995 888899988888888887776653 4
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...+.++.++.|++.+...+...+++.|.+|+ +.|++.+++++...++|..+||.++|++.+..|++..|++.+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~------~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~ 385 (417)
T PRK10489 312 WILAVLCLALFGYLSAISSLLQYTLLQTQTPD------EMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASG 385 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH------HHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHH
Confidence 55677788889999988888788888888763 334668999999999999999999999999999998888777
Q ss_pred HHHHHHHHHHHhhcce
Q 009538 162 FMMFLSCAMFFLGSRL 177 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~~ 177 (532)
...++..++.+...++
T Consensus 386 ~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 386 FGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHhccc
Confidence 6555444444443343
No 139
>PRK03545 putative arabinose transporter; Provisional
Probab=98.82 E-value=5.8e-08 Score=100.83 Aligned_cols=141 Identities=13% Similarity=-0.064 Sum_probs=108.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHH-HHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVL-SLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++.+.+++.+.+.++..++.++.|+++||+ |||+.+ .+..+..++..+. ..+.
T Consensus 239 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~~l~~~~~------------------------ 292 (390)
T PRK03545 239 SENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLLLLLPAAN------------------------ 292 (390)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHHHHHHHhc------------------------
Confidence 456778888889999999999999999996 988654 4444444443333 2322
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+...+.+..++.|++.+...+.....+.+..|+ .++++++.+....++|..+||.++|++.+++|++..|++.
T Consensus 293 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~ 365 (390)
T PRK03545 293 SEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-------ATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVG 365 (390)
T ss_pred hHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHH
Confidence 456677788899999888878777777776431 2245788888889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhc
Q 009538 161 AFMMFLSCAMFFLGS 175 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~ 175 (532)
++..+++++..+...
T Consensus 366 ~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 366 AALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHc
Confidence 888777777665544
No 140
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.80 E-value=6e-08 Score=102.61 Aligned_cols=155 Identities=13% Similarity=-0.002 Sum_probs=107.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+++...+.++..++.+++|+++||+ |||+.+.++.++..++.++.++...... .+ .| +..+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~-------~~~~ 382 (481)
T TIGR00879 317 STDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV-TG-----SS-------KSSG 382 (481)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc-CC-----cc-------cchh
Confidence 345567788888888999999999999996 9999999998888888877774221000 00 00 0002
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...+....++.+.......+....++.|.+|+ +.+++.++..+...++|.+++|.+.+++.++.+|++.|++.+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~ 456 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPL------SLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFG 456 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCCh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHH
Confidence 22233333333333333457677778998874 234568999999999999999999999998899999999887
Q ss_pred HHHHHHHHHHHhhcc
Q 009538 162 FMMFLSCAMFFLGSR 176 (532)
Q Consensus 162 ~~~~l~~~~~~~~~~ 176 (532)
++.+++.+..+...|
T Consensus 457 ~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 457 GLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHheecc
Confidence 776666555444333
No 141
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.78 E-value=3.6e-08 Score=105.08 Aligned_cols=142 Identities=10% Similarity=-0.056 Sum_probs=100.8
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|..++++..+.+.++..++.+++|+++||+ |||+.+.....+..++..+..+... .+
T Consensus 292 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 348 (467)
T PRK09556 292 SKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALIIFTLGVYQHA----------------------TS 348 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHHHHHHHHhc----------------------Cc
Confidence 567788888899999999999999999996 9999887765555544333333210 13
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhH-HHHHHHHhhhhccc-----------
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTF-AMMISLTVIVYVQS----------- 149 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~-G~~~g~~~~g~i~~----------- 149 (532)
...+++.+++.|+..............|.+|+ +.++++.++.....++ |..++|.+.|++.+
T Consensus 349 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~------~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~ 422 (467)
T PRK09556 349 EYMYLASLFALGFLVFGPQLLIGVAAVGFVPK------KAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGY 422 (467)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcch------hhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccc
Confidence 44566777777765433222233556688764 3346688888888886 77999999999988
Q ss_pred -cccchhhhHHHHHHHHHHHHHHH
Q 009538 150 -DVSWAWGLGIPAFMMFLSCAMFF 172 (532)
Q Consensus 150 -~~gw~~~F~v~~~~~~l~~~~~~ 172 (532)
..+|+..|++..+..+++.+..+
T Consensus 423 ~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 423 TLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred cccChHHHHHHHHHHHHHHHHHHH
Confidence 57899999987777666655443
No 142
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.77 E-value=5.8e-08 Score=101.28 Aligned_cols=138 Identities=9% Similarity=-0.074 Sum_probs=106.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+.+.++..++.++.|+++||+ |||+.+..+.+...++.++..+.+ +
T Consensus 253 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 307 (406)
T PRK11551 253 SRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAAAP------------------------S 307 (406)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhcC------------------------c
Confidence 456778888899999999999999999996 999999987777766666555542 3
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc-cchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-SWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~-gw~~~F~v~ 160 (532)
...+.+.-++.|++.+...+...++..|.+|++ .|++.+++.+....+|.++||.++|++.++. +|...|++.
T Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 381 (406)
T PRK11551 308 FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ------VRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGAS 381 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh------hhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHH
Confidence 445666777888888888888888999988752 2356899999999999999999999988754 556666666
Q ss_pred HHHHHHHHHH
Q 009538 161 AFMMFLSCAM 170 (532)
Q Consensus 161 ~~~~~l~~~~ 170 (532)
.+..+++.+.
T Consensus 382 ~~~~~~~~~~ 391 (406)
T PRK11551 382 IPVILVAALA 391 (406)
T ss_pred HHHHHHHHHH
Confidence 5555444443
No 143
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.75 E-value=5.9e-06 Score=83.74 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=50.9
Q ss_pred HHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 009538 410 SLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTK 466 (532)
Q Consensus 410 ~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~ 466 (532)
.+++...+.....+-+|..+.+|++..+...|++++....++.++|.+.+.+.+.++
T Consensus 349 ll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 349 LLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG 405 (438)
T ss_pred HHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc
Confidence 556777777777888999999999999999999999999999999999999988764
No 144
>PRK03699 putative transporter; Provisional
Probab=98.74 E-value=4e-08 Score=102.31 Aligned_cols=137 Identities=13% Similarity=0.086 Sum_probs=106.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
|..+++++.+.+.++..++.+++|+++||+ |||+.+.....+..++..+...++ +
T Consensus 239 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~~~~------------------------~ 293 (394)
T PRK03699 239 SLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVLMYLFVNTD------------------------D 293 (394)
T ss_pred ChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHcC------------------------C
Confidence 567789999999999999999999999995 999999988877766655554443 2
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...+.+..++.|++.+...|...++..+..+. + + +...+......++|..++|.+.|++.+..||+..|++.+
T Consensus 294 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~-~-----~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~ 366 (394)
T PRK03699 294 PSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-A-S-----PKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTAN 366 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C-C-----HHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhH
Confidence 33455667888888888888777777776542 1 1 234677778889999999999999999999999999877
Q ss_pred HHHHHHHHH
Q 009538 162 FMMFLSCAM 170 (532)
Q Consensus 162 ~~~~l~~~~ 170 (532)
+..+++.+.
T Consensus 367 ~~~~~~~~~ 375 (394)
T PRK03699 367 GLYAVVFVM 375 (394)
T ss_pred HHHHHHHHH
Confidence 766655443
No 145
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.74 E-value=1.2e-06 Score=87.30 Aligned_cols=143 Identities=12% Similarity=0.035 Sum_probs=95.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..|.+.+...-.....+..++.|.++||+ ||||.-+.-+++++++.++--. ++
T Consensus 67 ~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~-------------------------~~ 120 (354)
T PF05631_consen 67 SEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS-------------------------SN 120 (354)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc-------------------------cc
Confidence 345666677777777888999999999996 9999999888888888765433 26
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHh-HHHHHHHHhhhhccccccc--hhhhH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFT-FAMMISLTVIVYVQSDVSW--AWGLG 158 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~-~G~~~g~~~~g~i~~~~gw--~~~F~ 158 (532)
+..++++|++.|++......+=.+.+.....+++-++ +.++..++...+..| +-++++.+++-++.+..+. .++|.
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~-~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~ 199 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ-EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFD 199 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHH
Confidence 8899999999999999988877776655433222111 222333332221222 2233333455556655554 78999
Q ss_pred HHHHHHHHHHHHH
Q 009538 159 IPAFMMFLSCAMF 171 (532)
Q Consensus 159 v~~~~~~l~~~~~ 171 (532)
...++..++.++.
T Consensus 200 ~a~~~l~~~~~~I 212 (354)
T PF05631_consen 200 AAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHH
Confidence 8888766665543
No 146
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.72 E-value=8.6e-08 Score=99.80 Aligned_cols=145 Identities=14% Similarity=0.035 Sum_probs=108.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+++.+.+.+.++..++.+.+|+++||+ |||+.+.++..+..++.++....+. +
T Consensus 238 s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~~~~~~~~~-----------------------~ 293 (393)
T PRK09705 238 SAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGFCGFIWLPL-----------------------Q 293 (393)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHHHHccc-----------------------h
Confidence 567788999999999999999999999995 9999999988888887766543321 1
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F~v~ 160 (532)
...+ .-++.|++.+...|.......+.++++ +.+++.++..+...+++..+||.+.|++.+..| |+..|.+.
T Consensus 294 ~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~-----~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~ 366 (393)
T PRK09705 294 LPVL--WAMVCGLGLGGAFPLCLLLALDHSVQP-----AIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFH 366 (393)
T ss_pred HHHH--HHHHHHHhccchHHHHHHHHHhhcCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 1112 224568888888887777777776532 234668999999999999999999999998775 78888887
Q ss_pred HHHHHHHHHHHHhhcce
Q 009538 161 AFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~ 177 (532)
.+..++..+..+...|+
T Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 367 ALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 76655554444444333
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.72 E-value=1.5e-07 Score=99.95 Aligned_cols=139 Identities=11% Similarity=0.034 Sum_probs=107.4
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhcc-ccchHHHHHHH--HHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTY-FGRYKTLGFAS--VASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPT 78 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~-~Grr~~l~~~~--~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~ 78 (532)
++.+++.+.+.+.++..++.+++|+++||. +++|+...++. ++.+++.+++..+.
T Consensus 274 s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~---------------------- 331 (455)
T TIGR00892 274 DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG---------------------- 331 (455)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc----------------------
Confidence 566788899999999999999999999973 13444444433 33344444554442
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc-cchhhh
Q 009538 79 PWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-SWAWGL 157 (532)
Q Consensus 79 ~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~-gw~~~F 157 (532)
+++.+++.+++.|++.+...++..+++.|.+|++ .+++.++++....++|.++||.++|++.+.. +|++.|
T Consensus 332 --~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f 403 (455)
T TIGR00892 332 --DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ------RFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIF 403 (455)
T ss_pred --hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH------HHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHH
Confidence 5667888999999999999999999999988742 3356899999999999999999999998877 599999
Q ss_pred HHHHHHHHHHHHH
Q 009538 158 GIPAFMMFLSCAM 170 (532)
Q Consensus 158 ~v~~~~~~l~~~~ 170 (532)
++.++..+++.+.
T Consensus 404 ~~~~~~~li~~~~ 416 (455)
T TIGR00892 404 YASGSIVVSAGLF 416 (455)
T ss_pred HHhhHHHHHHHHH
Confidence 9988876665553
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.68 E-value=9.9e-08 Score=98.32 Aligned_cols=134 Identities=13% Similarity=-0.011 Sum_probs=99.1
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHH--HHHHhhcccCCCCCCCCCCCCCCCCCCc
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLV--LSLTAAISKLHPPDCGNQDSGACPGPTP 79 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il--~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (532)
+..+.+.+...+.++..++.+++|+++||+ |||+.+..+..+..+..+. ..+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 309 (394)
T TIGR00883 253 SANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALLAVPLLMALLDS---------------------- 309 (394)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHhcC----------------------
Confidence 456677888888899999999999999996 9999888665555444322 222210
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhh-hHHHHhHHHHHHHHhhhhcccccc-chhhh
Q 009538 80 WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNW-YYFTFTFAMMISLTVIVYVQSDVS-WAWGL 157 (532)
Q Consensus 80 ~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~-~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F 157 (532)
.+...+++..++.|++.+...+...+++.|.+|+++ |++.++. +.....+|..++|.++|++.++.| |++.+
T Consensus 310 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 310 GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 135566778888999998899999999999987532 2335665 445567899999999999999888 88877
Q ss_pred HHHHHHH
Q 009538 158 GIPAFMM 164 (532)
Q Consensus 158 ~v~~~~~ 164 (532)
+..++..
T Consensus 384 ~~~~~~~ 390 (394)
T TIGR00883 384 YYLAALA 390 (394)
T ss_pred HHHHHHH
Confidence 7655443
No 149
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.67 E-value=1.8e-05 Score=82.39 Aligned_cols=105 Identities=10% Similarity=0.069 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 009538 10 INIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGL 89 (532)
Q Consensus 10 ~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 89 (532)
.++-+....+.+++++.+.|.. |.|..+.++...+..-.+..-+- |-+.++++-
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-------------------------N~y~~yfss 109 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-------------------------NSYYLYFSS 109 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-------------------------chHHHHHHH
Confidence 4556667788999999999995 99999999999998877766654 456799999
Q ss_pred HHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhh
Q 009538 90 GLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVY 146 (532)
Q Consensus 90 ~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~ 146 (532)
.+.|+|.+....---.|+++..++ +.+.+..++.......+.++|.+.-..
T Consensus 110 allG~Gaallw~GqG~ylt~~st~------~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 110 ALLGFGAALLWTGQGGYLTSNSTR------ETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred HHhhhhHHheecccceehhhcCCh------hhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 999999999888888888887442 334556777777777777777554333
No 150
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.67 E-value=4.5e-07 Score=96.78 Aligned_cols=144 Identities=12% Similarity=0.009 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 6 ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 6 ~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
..+....+.+...++.+++|+++||+ |||+.++.+.++.+++.++++.....+ ..+. ..
T Consensus 308 ~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~-------------------~~~~-~~ 366 (479)
T PRK10077 308 ALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ-------------------APGI-VA 366 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC-------------------cccH-HH
Confidence 34455556677788999999999995 999999999999999988876542100 0111 22
Q ss_pred HHHHHHHHHhccc-cccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhh------hccccccchhhhH
Q 009538 86 FTGLGLMVIGAGG-IRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIV------YVQSDVSWAWGLG 158 (532)
Q Consensus 86 ~~~r~l~G~g~g~-~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g------~i~~~~gw~~~F~ 158 (532)
..+.++.+.+.+. ..|+...++.|.+|+ +.|+.++++.+...++|..+++.+.+ ++.+..+|++.|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~------~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 440 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPN------AIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYW 440 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCCh------hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHH
Confidence 3334444444433 347788999999874 33466888888888888888865554 4446789999999
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 009538 159 IPAFMMFLSCAMFFLGSR 176 (532)
Q Consensus 159 v~~~~~~l~~~~~~~~~~ 176 (532)
+.++..++..+..+...|
T Consensus 441 ~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 441 IYGCMGVLAALFMWKFVP 458 (479)
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 877765555554444333
No 151
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.65 E-value=1.4e-07 Score=97.79 Aligned_cols=128 Identities=14% Similarity=0.065 Sum_probs=99.8
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..+.+++.+.+.++..++.++.|+++||+ |||+.+.++..+..+..+...... .+
T Consensus 272 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~ 327 (405)
T TIGR00891 272 SPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAIG-----------------------AN 327 (405)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHhC-----------------------Cc
Confidence 567788899999999999999999999995 999999988776543332221111 13
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhhhHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWGLGI 159 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F~v 159 (532)
.+.+.++.++.++..+...+..+.++.|.+|+ +.+++.+++.+...++|..+||.++|++.++.| |+..|..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 328 VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPT------DQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred hHHHHHHHHHHHHHHccchhhHHHHHhhhCCc------chhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 45666677777777777778888899998764 233568999999999999999999999999888 8877665
No 152
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.65 E-value=2.5e-07 Score=95.83 Aligned_cols=135 Identities=10% Similarity=-0.020 Sum_probs=111.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+...++..++.+++|++.||+ |+|+.+.++.+...+..++.++++ +
T Consensus 238 s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~------------------------~ 292 (382)
T TIGR00902 238 SASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVGRWAIIGAIE------------------------A 292 (382)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHHHHHHHHhHh------------------------h
Confidence 566778888888888888999999999996 999999999999999999998874 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhH-HHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYY-FTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~-~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
.+.+++.++++|+..|...+....++.+. |++ .+++..+++. ....+|.++||.++|++.+++|+ ..|++.
T Consensus 293 ~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~------~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~ 364 (382)
T TIGR00902 293 FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGS------EIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFM 364 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHH
Confidence 67788899999999999999999999986 532 2245677765 46779999999999999999986 667766
Q ss_pred HHHHHHHHH
Q 009538 161 AFMMFLSCA 169 (532)
Q Consensus 161 ~~~~~l~~~ 169 (532)
+...+++++
T Consensus 365 ~~~~~~~~~ 373 (382)
T TIGR00902 365 AIIAAAAFF 373 (382)
T ss_pred HHHHHHHHH
Confidence 665555543
No 153
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.64 E-value=1.1e-07 Score=100.16 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=102.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhH
Q 009538 3 SITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQL 82 (532)
Q Consensus 3 ~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (532)
+.+.+++...+.++..++.+++|+++||+ |||+++.++.++.+++.++..+.. .+.
T Consensus 256 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~ 311 (437)
T TIGR00792 256 PELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLGYLIFFFAG-----------------------SNL 311 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcc-----------------------hhH
Confidence 34556777778888889999999999996 999999999999998888776642 144
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCC-CcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccch
Q 009538 83 AFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTE-SGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWA 154 (532)
Q Consensus 83 ~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~-~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~ 154 (532)
..+++..++.|++.+...+...++++|..+.++. .+++..+..++++.+...+|..+|+.+.|++.+..||.
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 312 PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 5677788889999999999999999998654321 12234577899999999999999999999988777763
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.64 E-value=3.4e-07 Score=95.60 Aligned_cols=143 Identities=13% Similarity=0.014 Sum_probs=102.8
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLG-FASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~-~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+..+.+++.+.+.++..++.++.|+++||+ |||+.+. .+.....++.+.+....... .+
T Consensus 255 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~~~~l~~~~~~~-------------------~~ 314 (402)
T TIGR00897 255 STSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIFTLALYYIPQHF-------------------GH 314 (402)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHHHHcc-------------------CC
Confidence 456677888888999999999999999995 9998764 33344444444433322100 02
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+...+++..++.|++.+...|. ...+.|. +|+ .+++.+++++...++|..+||.+++++.+.+||+..|++.
T Consensus 315 ~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~------~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 315 SFAVALIIAIALGIFLAGYVPL-AAVFPTL-APK------HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIF 386 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-HHHHHhh-Ccc------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 3556677888888888776654 4555664 321 2356899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHH
Q 009538 161 AFMMFLSCAMFF 172 (532)
Q Consensus 161 ~~~~~l~~~~~~ 172 (532)
++..+++.++.+
T Consensus 387 a~~~~i~~~~~~ 398 (402)
T TIGR00897 387 AALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHH
Confidence 877666555443
No 155
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.57 E-value=4.5e-07 Score=93.14 Aligned_cols=145 Identities=17% Similarity=0.072 Sum_probs=96.4
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKT-LGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~-l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+..+.+++.+.+.++..++.+++|+++||+ |||+. +........++.++.+....... ...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 310 (399)
T TIGR00893 249 SILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAIIAGLVLSLLMFATN-----------------YVN 310 (399)
T ss_pred cHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHHHHHHHHHHHHHHhc-----------------cch
Confidence 456778888889999999999999999996 99962 11111122222111111100000 001
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F~v 159 (532)
+....+....+.+++.+ ..|....++.|.+|+ +.|++.++++....++|..++|.+.|++.+..| |++.|++
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~ 383 (399)
T TIGR00893 311 IPYAALALVALGFFGLG-AGAIGWALISDNAPG------NIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMV 383 (399)
T ss_pred hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcCh------hHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHH
Confidence 22333333444444444 788899999998874 234568999999999999999999999999888 9999998
Q ss_pred HHHHHHHHHHHH
Q 009538 160 PAFMMFLSCAMF 171 (532)
Q Consensus 160 ~~~~~~l~~~~~ 171 (532)
.++..+++.+..
T Consensus 384 ~~~~~~~~~~~~ 395 (399)
T TIGR00893 384 VAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHH
Confidence 877766655544
No 156
>PRK09952 shikimate transporter; Provisional
Probab=98.57 E-value=7.3e-07 Score=94.23 Aligned_cols=139 Identities=12% Similarity=0.029 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHH
Q 009538 8 TLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFT 87 (532)
Q Consensus 8 ~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 87 (532)
.+...+.....++.+++|+++||+ ||||++..+.++..++.+.+....... .+...+++
T Consensus 290 ~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~ 348 (438)
T PRK09952 290 NIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTLSAFPFFMALEAQ--------------------SIFWIVFF 348 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHcC--------------------ChHHHHHH
Confidence 344445556677888999999996 999999988777666554443321000 12334455
Q ss_pred HHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhH-HHHhHHHHHHHHhhhhcccc--ccchhhhHHHHHHH
Q 009538 88 GLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYY-FTFTFAMMISLTVIVYVQSD--VSWAWGLGIPAFMM 164 (532)
Q Consensus 88 ~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~-~~~~~G~~~g~~~~g~i~~~--~gw~~~F~v~~~~~ 164 (532)
..++.+++.+...+...++++|.+|++ .|.+..++-+ .+..+|..++|.+.+++.+. .+|+..|...++..
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~------~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGAS------YRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcc------hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 667778888888888889999998752 2334555533 34558889999999998763 35888887766666
Q ss_pred HHHHHHHHh
Q 009538 165 FLSCAMFFL 173 (532)
Q Consensus 165 ~l~~~~~~~ 173 (532)
+++.+..+.
T Consensus 423 ~i~~v~~~~ 431 (438)
T PRK09952 423 LISAMTALL 431 (438)
T ss_pred HHHHHHHHH
Confidence 666555443
No 157
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.57 E-value=1.1e-06 Score=89.51 Aligned_cols=145 Identities=18% Similarity=0.114 Sum_probs=114.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|.+..+++.-.|.++..++.+++|+++|| +.|+++.....+..+..+...+..+
T Consensus 244 ~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~~~----------------------- 298 (394)
T COG2814 244 FSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFTGA----------------------- 298 (394)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHhcc-----------------------
Confidence 366788999999999999999999999999 8999999998888888888777652
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+....++.-++-|++.+...+.-..-+++.. | +......+++....|+|..+|..+||.+.+++|+....++.
T Consensus 299 ~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p------~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~ 371 (394)
T COG2814 299 SPALALALLFLWGFAFSPALQGLQTRLARLA-P------DAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVG 371 (394)
T ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-C------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Confidence 3445666666677777766555555555522 2 12235789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcce
Q 009538 161 AFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~ 177 (532)
+++.+++.++.+...++
T Consensus 372 a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 372 AALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99888887766554443
No 158
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.55 E-value=2.7e-06 Score=87.64 Aligned_cols=140 Identities=9% Similarity=0.090 Sum_probs=101.4
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.......++..++.++.+++ .||+++| +.+..+.++..++.+.....
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l----~d~~g~r-------~~~~~~~~~~~~~~~~~~~~---------------------- 90 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPL----SDRYGRR-------PVLLLGLFIFALSSLGLALS---------------------- 90 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhH----HHhcCCh-------HHHHHHHHHHHHHHHHHHHH----------------------
Confidence 33444555556666665444 6676655 56777777777776665543
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
.+.+.++...++.+++.+...+...+++.|.+|++.|++.+++.+....+|..+++.+.+.+.+..
T Consensus 91 --~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------ 156 (385)
T TIGR00710 91 --NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL------------ 156 (385)
T ss_pred --ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------
Confidence 256667777888999999999999999999999999999999999999999999999998876532
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCAKWY 508 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~ 508 (532)
++...|+..+++.++..+..+...++.
T Consensus 157 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 157 ----SWHAIFAFLSLAGILLSALIFFILPET 183 (385)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 234566666666666655555444443
No 159
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.54 E-value=3.3e-06 Score=89.09 Aligned_cols=139 Identities=11% Similarity=0.022 Sum_probs=99.0
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.+.....++..++.++.+++ .||+++| +.+.+++++.+++.+.....
T Consensus 62 ~~~~~~~~~~~~~~~~~G~l----~dr~g~r-------~~~~~~~~~~~~~~~~~~~~---------------------- 108 (434)
T PRK11663 62 LLATLFYITYGVSKFVSGIV----SDRSNAR-------YFMGIGLIATGIINILFGFS---------------------- 108 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHH----HhhcCCc-------hhHHHHHHHHHHHHHHHHHH----------------------
Confidence 34444555666666665544 7776665 56777888877777666554
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
.+.+.++...++.+++.+...+....++.+.+|++.|++++++.+....+|..+++.+.+.+.+..
T Consensus 109 --~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------ 174 (434)
T PRK11663 109 --SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY------------ 174 (434)
T ss_pred --hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------
Confidence 245666666777888888888888999999999999999999999999999999999998886532
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
++.+.|++.+++.++..+...+..++
T Consensus 175 ----gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 175 ----GWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 24567766666655554444433343
No 160
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.54 E-value=5.9e-08 Score=98.77 Aligned_cols=152 Identities=15% Similarity=0.169 Sum_probs=118.6
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
++++....+..+++.|+.+.+ .+|+.|+ +.+.+|.++.+++.+..+...
T Consensus 71 Gll~~vf~v~~~i~sPl~gyL----adryNR~-------~v~~vG~~iW~~Av~~~~fs~-------------------- 119 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYL----ADRYNRK-------RVIAVGIFIWTLAVFASGFSN-------------------- 119 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHH----HhhcCcc-------eEEeeHHHHHHHHHHHHHHHH--------------------
Confidence 345555556666667775554 5555544 788999999999998888752
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPE 476 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~ 476 (532)
+.|.+++.=.+.|+||+...|...++++|.+|+..|+++.++++++..+|..+|..+...+.+... .
T Consensus 120 ----~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~---- 186 (493)
T KOG1330|consen 120 ----HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----W---- 186 (493)
T ss_pred ----HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----c----
Confidence 577777788999999999999999999999999999999999999999999999888777765431 1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcc
Q 009538 477 DLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKGSGDGAP 518 (532)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~ 518 (532)
..+.|...++++++..+...++.++.+++..++.+.
T Consensus 187 ------Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~ 222 (493)
T KOG1330|consen 187 ------WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDG 222 (493)
T ss_pred ------eEEEEEeehHHHHHHHHHHHhhccCccccccccccc
Confidence 245788889999998888888777766555444443
No 161
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.54 E-value=4.2e-07 Score=94.62 Aligned_cols=134 Identities=9% Similarity=0.035 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHH
Q 009538 5 TATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAF 84 (532)
Q Consensus 5 ~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (532)
..+.+.+...+...++.+..|++.||+ |||+.+.++.++++++..+...+. +.+.
T Consensus 255 ~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~~~~~------------------------~~~~ 309 (396)
T TIGR00882 255 VFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGSSFAT------------------------TALE 309 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHhcC------------------------ChHH
Confidence 345566666667777889999999995 999999999999999887766653 4556
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhh-hHHHHhHHHHHHHHhhhhccccccchhhhHHHHHH
Q 009538 85 LFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNW-YYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFM 163 (532)
Q Consensus 85 l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~-~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~ 163 (532)
+++.++++|++.+........+..+.+++ +.+++..+. +.....+|..+++.++|++.+..||+.+|.+.++.
T Consensus 310 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~ 383 (396)
T TIGR00882 310 VVILKMLHAFEVPFLLVGCFKYITSQFDV------RLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCI 383 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCc------ceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHH
Confidence 78889999998766655555566665442 122344544 56789999999999999999999999999997776
Q ss_pred HHHHHH
Q 009538 164 MFLSCA 169 (532)
Q Consensus 164 ~~l~~~ 169 (532)
.++..+
T Consensus 384 ~~i~~~ 389 (396)
T TIGR00882 384 VLLFTL 389 (396)
T ss_pred HHHHHH
Confidence 655544
No 162
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.54 E-value=1.7e-06 Score=74.93 Aligned_cols=130 Identities=21% Similarity=0.330 Sum_probs=91.0
Q ss_pred hhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHH
Q 009538 324 MLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGL 403 (532)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (532)
.++.++..++.+++ .||+++| +.+..+..+..++.+..... .+.+
T Consensus 8 ~~~~~~~~~~~g~~----~d~~g~~-------~~~~~~~~~~~~~~~~~~~~------------------------~~~~ 52 (141)
T TIGR00880 8 ALGQLIYSPLSGLL----TDRFGRK-------PVLLVGLFIFVLSTAMFALS------------------------SNIT 52 (141)
T ss_pred hhHHHHHHhhHHHH----Hhhcchh-------HHHHHHHHHHHHHHHHHHHh------------------------ccHH
Confidence 34445555554443 5555544 45566666666665554432 2455
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhH
Q 009538 404 WLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRL 483 (532)
Q Consensus 404 ~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (532)
......++.+++.+...+..+.+..|.+|++.|++.+++.+....++..+++.+.+.+.+.. ++
T Consensus 53 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------~~ 116 (141)
T TIGR00880 53 VLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL----------------GW 116 (141)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc----------------ch
Confidence 66667788899888888888999999999999999999999999999999999999886532 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 009538 484 DYFYYLVAALGLLNFGFFLLC 504 (532)
Q Consensus 484 ~~~~~~~~~~~vv~~~~~~~~ 504 (532)
.+.|+..+.+.++..+.....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 117 RAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 456666666666555554443
No 163
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.51 E-value=8.6e-07 Score=95.08 Aligned_cols=146 Identities=9% Similarity=-0.028 Sum_probs=101.2
Q ss_pred chhhhHHHHHHH-HHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCCCCCCCCc
Q 009538 2 KSITATTLINIF-SGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSL-TAAISKLHPPDCGNQDSGACPGPTP 79 (532)
Q Consensus 2 ~~~~~~~i~~~~-~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~-a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (532)
|+.+.+++...+ .++..++.+++|+++||+ ||||.+.++.++..++.++... +.. .
T Consensus 256 s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l~~~-~-------------------- 313 (491)
T PRK11010 256 DAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLLSIT-D-------------------- 313 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc-c--------------------
Confidence 566777776544 568889999999999996 9999888777666665544322 110 0
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHH
Q 009538 80 WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 80 ~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v 159 (532)
++...+...-+++.+..|...+...++..+..+++. .++.++..+...++|..+++.+.|++.+.+||+..|.+
T Consensus 314 ~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~ 387 (491)
T PRK11010 314 KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLF 387 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 133344445555454445444555666666654322 23468888888999999888899999999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 009538 160 PAFMMFLSCAMFFLGS 175 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~~ 175 (532)
..+..+++.+..+..+
T Consensus 388 ~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 388 SVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888777766655543
No 164
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.49 E-value=2.4e-06 Score=89.25 Aligned_cols=141 Identities=13% Similarity=-0.032 Sum_probs=105.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.++....+..+..++.++.|+++||+ |||+.+.++.++..++.++.++..... ..+
T Consensus 249 ~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~~~~~~~~~~-------------------~~~ 308 (406)
T PRK15402 249 SSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLLLAALATVIS-------------------SHA 308 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHcc-------------------ccc
Confidence 455667777777778888999999999996 999999999998888888877753211 124
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
...++++.++.|+|.+...|.......+. ++ +.+++..+.+++...+|..+|+.+++++.+..++....+..+
T Consensus 309 ~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~------~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~ 381 (406)
T PRK15402 309 YLWLTAGLSLYAFGIGLANAGLYRLTLFS-SD------VSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNL 381 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cc------ccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHH
Confidence 56678889999999998877666554432 22 233568999999999999999999999988888776666655
Q ss_pred HHHHHHHH
Q 009538 162 FMMFLSCA 169 (532)
Q Consensus 162 ~~~~l~~~ 169 (532)
+..++.++
T Consensus 382 ~~~~~~~~ 389 (406)
T PRK15402 382 ANGLLWLL 389 (406)
T ss_pred HHHHHHHH
Confidence 54444433
No 165
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.46 E-value=8.1e-07 Score=94.27 Aligned_cols=141 Identities=11% Similarity=-0.022 Sum_probs=88.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccc--hHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGR--YKTL-GFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPT 78 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Gr--r~~l-~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~ 78 (532)
+..+++++...+.++..++.+++|+++|| +++ |+.. .....+..++.++..+...
T Consensus 287 s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~~~~~~~~~~~~--------------------- 344 (452)
T PRK11273 287 ALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVYWLNPA--------------------- 344 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHHHHHHHHHHhcc---------------------
Confidence 45667778888888888999999999999 454 4332 2222333333333322210
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHH-HHHhhhhccccccchhhh
Q 009538 79 PWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMI-SLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 79 ~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~-g~~~~g~i~~~~gw~~~F 157 (532)
.+...+.+..++.|.+.....+....+..|.+|+ +.+++.+++.+...++|..+ ||.+.|++.++.||++.|
T Consensus 345 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~------~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f 417 (452)
T PRK11273 345 -GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK------KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 417 (452)
T ss_pred -cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh------hhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHH
Confidence 1233344445555554322222233455677764 23356788888888888654 799999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 009538 158 GIPAFMMFLSCAMF 171 (532)
Q Consensus 158 ~v~~~~~~l~~~~~ 171 (532)
++.+...+++.+..
T Consensus 418 ~~~~~~~~~~~~~~ 431 (452)
T PRK11273 418 MVMIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHHHHHH
Confidence 98777656554443
No 166
>PRK15075 citrate-proton symporter; Provisional
Probab=98.45 E-value=1.8e-06 Score=91.14 Aligned_cols=126 Identities=14% Similarity=0.003 Sum_probs=82.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHH-HHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLV-LSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+..+.+++...+.++..++.+.+|+++||+ ||||.+..+.....+..+. ...... .+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~---------------------~~ 329 (434)
T PRK15075 272 SAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALSWLVA---------------------AP 329 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHc---------------------CC
Confidence 455667777788888889999999999996 9999988765544332211 111110 01
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHh-HHHHHHHHhhhhccccccchh
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFT-FAMMISLTVIVYVQSDVSWAW 155 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~-~G~~~g~~~~g~i~~~~gw~~ 155 (532)
++..+....++.+++.|...+....++.|.+|++. |++.+++.+...+ ++..++|.+.+++.++.|+++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 23334444555666777767767788899887532 2345666444333 457779999999999888653
No 167
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.44 E-value=1.7e-06 Score=89.63 Aligned_cols=138 Identities=10% Similarity=0.027 Sum_probs=95.8
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+.+.++..++.++.|++.||+ |+|+.+..+..+.+++.++.....+ +
T Consensus 233 s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~~~~-----------------------~ 288 (382)
T PRK10091 233 SETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFFFGG-----------------------M 288 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHHHHh-----------------------h
Confidence 566788889999999999999999999996 9999999999888888766554321 2
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-cccchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS-DVSWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~-~~gw~~~F~v~ 160 (532)
....++..++.++|.+...+.......+..++ ++ ..+ .+......++|..+||.++|++.+ +.+|++.|.+.
T Consensus 289 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~--~~~--~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~ 361 (382)
T PRK10091 289 KTASLIFAFICCAGLFALSAPLQILLLQNAKG---GE--LLG--AAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPA 361 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCc---ch--HHH--HHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHH
Confidence 23445555566666554444333333333332 11 112 223356788999999999999887 47899999987
Q ss_pred HHHHHHHHHH
Q 009538 161 AFMMFLSCAM 170 (532)
Q Consensus 161 ~~~~~l~~~~ 170 (532)
+....+....
T Consensus 362 ~~~~~~~~~~ 371 (382)
T PRK10091 362 ALLSFAAMSS 371 (382)
T ss_pred HHHHHHHHHH
Confidence 7655544443
No 168
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.43 E-value=4.8e-06 Score=84.43 Aligned_cols=137 Identities=18% Similarity=0.272 Sum_probs=100.3
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.......+...+..++.+++ .||+++| +.+..+.++.+++.+...+.
T Consensus 36 ~~~~~~~~~~~~~~~~~g~l----~dr~g~r-------~~l~~~~~~~~~~~~~~~~~---------------------- 82 (352)
T PF07690_consen 36 LLFSAFFLGSALFSPFAGYL----SDRFGRR-------RVLIIGLLLFALGSLLLAFA---------------------- 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHHS-HH-------HHHHHHHHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHcCCe-------eeEeehhhhhhhHHHHhhhh----------------------
Confidence 34445555666666664444 6666555 67777888887774444432
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
.+.+.++...++.|++.+...+....++.|.+|++.|++.+++......+|..+++.+.+.+.+..
T Consensus 83 --~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------ 148 (352)
T PF07690_consen 83 --SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF------------ 148 (352)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC------------
T ss_pred --hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc------------
Confidence 244577888899999999999999999999999999999999999999999999999999887532
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCA 505 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~ 505 (532)
++.+.|++.+++.++..+....+.
T Consensus 149 ----~~~~~~~~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 149 ----GWRWAFLISAILSLIAAILFILFL 172 (352)
T ss_dssp ----HHCCHHHHHHHHHHHHHHHHHCCC
T ss_pred ----ccccccccccchhhhhhhhHhhhh
Confidence 234467777777777766433333
No 169
>PRK10054 putative transporter; Provisional
Probab=98.43 E-value=6e-06 Score=86.02 Aligned_cols=137 Identities=9% Similarity=0.097 Sum_probs=92.2
Q ss_pred hhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccc
Q 009538 319 YAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAIS 398 (532)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (532)
......+..++..++.+++ .||+++| +.+..+.++..++++......
T Consensus 48 ~~s~~~~~~~~~~~~~G~l----~Dr~g~k-------~~~~~~~~~~~~~~~~~~~~~---------------------- 94 (395)
T PRK10054 48 AMTIALTIGVVFSLGFGIL----ADKFDKK-------RYMLLAITAFASGFIAIPLVN---------------------- 94 (395)
T ss_pred HHHHHHHHHHHHHHHHHHH----HhhcCcc-------hhHHHHHHHHHHHHHHHHHHh----------------------
Confidence 3344445555566665554 7776665 466677777777766655541
Q ss_pred cchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCC
Q 009538 399 SLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDL 478 (532)
Q Consensus 399 ~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (532)
+.+..+...++.+.+.+...+....+..|..|++.|+++.|+.+....+|..+++.+.+.+.+. +
T Consensus 95 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~-------g------ 159 (395)
T PRK10054 95 --NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ-------S------ 159 (395)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------c------
Confidence 3444444555666666667777888999999999999999999999999999999999987631 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 479 NKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 479 ~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
+...|+..+++.++..+...+..++
T Consensus 160 ----~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 160 ----INLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 2346666666666655444443343
No 170
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.41 E-value=2.2e-06 Score=88.73 Aligned_cols=133 Identities=9% Similarity=0.009 Sum_probs=102.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+...++..+..++.|++.||+ |+|+.+.++.+...++.++.+.++ +
T Consensus 238 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~~~~~~~~------------------------~ 292 (382)
T PRK11128 238 SASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRWGLMGSTT------------------------A 292 (382)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhh------------------------h
Confidence 455677787877788888899999999996 999999999999999888777664 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhH-HHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYY-FTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~-~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
.+.+++..++.|++.+...+....++.+. ++++ +++..+.+. ....+|..+||.++|++.+.+|+ ..|+..
T Consensus 293 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~ 364 (382)
T PRK11128 293 LPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVM 364 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHH
Confidence 66788899999999999888888887775 3211 234566654 55677889999999999998887 456655
Q ss_pred HHHHHHH
Q 009538 161 AFMMFLS 167 (532)
Q Consensus 161 ~~~~~l~ 167 (532)
++..+++
T Consensus 365 ~~~~~~~ 371 (382)
T PRK11128 365 ALVALPA 371 (382)
T ss_pred HHHHHHH
Confidence 5444433
No 171
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.41 E-value=1.9e-06 Score=89.51 Aligned_cols=144 Identities=13% Similarity=-0.035 Sum_probs=101.3
Q ss_pred chhhhHHHHHHHHH-HHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSG-TTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~-~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++++.+++...+.. ...++.+++|++.||+ |+||.+..+..+.++..++........ . ..
T Consensus 241 s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~~~~-~-----------------~~ 301 (390)
T TIGR02718 241 PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSLALLWFAQAAFW-L-----------------AP 301 (390)
T ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHcc-c-----------------CC
Confidence 56777888777764 5667889999999995 999999988777644433332211100 0 01
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+...++....+.+++.|...+.....+.+..+++ +.+++.++..+...++|..+||.++|++.++.||+..|.+.
T Consensus 302 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~ 376 (390)
T TIGR02718 302 GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG-----DQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSG 376 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 2334455556667777777777777777765431 23356789999999999999999999999999999999987
Q ss_pred HHHHHHHHH
Q 009538 161 AFMMFLSCA 169 (532)
Q Consensus 161 ~~~~~l~~~ 169 (532)
++..+++.+
T Consensus 377 ~~~~l~a~~ 385 (390)
T TIGR02718 377 TVLAVLAIL 385 (390)
T ss_pred HHHHHHHHH
Confidence 776555543
No 172
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.41 E-value=6.9e-06 Score=86.09 Aligned_cols=145 Identities=12% Similarity=0.014 Sum_probs=102.2
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
.....++..++.+..++ +.||+++| +.+..++++.+++.+..+..
T Consensus 49 ~s~~~~~~~~~~~~~g~----l~dr~G~r-------~~~~~~~~~~~~~~~~~~~~------------------------ 93 (412)
T TIGR02332 49 ATLFYAAYVICGIPSNI----MLAIIGAR-------RWIAGIMVLWGIASTATMFA------------------------ 93 (412)
T ss_pred HHHHHHHHHHHHhhHHH----HHHHhChH-------HHHHHHHHHHHHHHHHHHHh------------------------
Confidence 33444445555555333 46776666 57778888888877776654
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCc
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLN 479 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (532)
.+.+++....++.|++++...+....++.|.+|++.|++.+++++....+|..+++.+.+.+.+..... +
T Consensus 94 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~----------~ 163 (412)
T TIGR02332 94 TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM----------A 163 (412)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC----------C
Confidence 356777788889999999999998899999999999999999999999999999999988876421000 0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009538 480 KGRLDYFYYLVAALGLLNFGFFLLCAKWYK 509 (532)
Q Consensus 480 ~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~ 509 (532)
..+..+.|++.++..++..+..+++.++.+
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 012356777766666665555555555543
No 173
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.40 E-value=2.2e-06 Score=91.00 Aligned_cols=147 Identities=14% Similarity=0.156 Sum_probs=113.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccch--HHHHHHHHHHHHHHHHHHH--HhhcccCCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRY--KTLGFASVASFLGMLVLSL--TAAISKLHPPDCGNQDSGACPGP 77 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr--~~l~~~~~~~~ig~il~~~--a~~~~~~~~~~~~~~~~~~~~~~ 77 (532)
++.+...+.-+-.+...++++++|++.||+ |.| ++++++++++.+-.+...+ -.+.- |
T Consensus 315 s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~----------------g- 376 (477)
T PF11700_consen 315 STTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILWIIIPLYGLFGFWPSFF----------------G- 376 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHHHHhhhccc----------------C-
Confidence 455666666667777889999999999995 999 9999888888555444333 11100 0
Q ss_pred CchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhh
Q 009538 78 TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWG 156 (532)
Q Consensus 78 ~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~ 156 (532)
.++-+.+++.-++.|+..|..++..-++.++..|++++ +.++++|.+..-..+.+||++.|.+.+..| -|+.
T Consensus 377 -~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e------~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g 449 (477)
T PF11700_consen 377 -LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE------AEFFGLYAITGKASSWLGPLLFGLITDATGSQRYG 449 (477)
T ss_pred -cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Confidence 02455677888899999999999999999999886432 358999999999999999999999988765 8898
Q ss_pred hHHHHHHHHHHHHHHHh
Q 009538 157 LGIPAFMMFLSCAMFFL 173 (532)
Q Consensus 157 F~v~~~~~~l~~~~~~~ 173 (532)
|..-.++.++++++++.
T Consensus 450 ~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 450 FLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88777777777766543
No 174
>PRK10504 putative transporter; Provisional
Probab=98.40 E-value=1.9e-06 Score=91.78 Aligned_cols=124 Identities=12% Similarity=-0.039 Sum_probs=95.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++...+.++..++.++.|+++||+ |||+++..+..+..++.++..+... ..+
T Consensus 295 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~ 352 (471)
T PRK10504 295 SPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVSLLFMLVAL---------------------LGW 352 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHhccc---------------------ccc
Confidence 345667777777777888889999999996 9999999999988888777665421 012
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccc
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSW 153 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw 153 (532)
...+.+.-+++|++.+...+....+..+.+|++ .++..++.+++...+|..+|+.++|.+.+..|+
T Consensus 353 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 353 YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN------LASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH------hccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 334455677888998888888888888887642 334579999999999999999999988665555
No 175
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.39 E-value=1.8e-06 Score=86.77 Aligned_cols=129 Identities=9% Similarity=0.005 Sum_probs=100.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+...+.|..++.++.+.++++.||+ |+||.+.++..+.+++.++....++
T Consensus 176 s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~~~~~l~~~~~~------------------------ 230 (310)
T TIGR01272 176 PEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAVLLSIGAALTHG------------------------ 230 (310)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHcCC------------------------
Confidence 567888999999999999999999999995 9999999998888888766655421
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
.. ...+-++.|++.+...|...+...+.++++. + ...++. ....+|.+++|.+.|.+.+..|.++.|++..
T Consensus 231 ~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~--~-----~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 231 YV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT--S-----QGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--h-----hhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 11 2235558899999999999998888776421 1 123333 5677999999999999999999999998766
Q ss_pred HHH
Q 009538 162 FMM 164 (532)
Q Consensus 162 ~~~ 164 (532)
+..
T Consensus 302 ~~~ 304 (310)
T TIGR01272 302 PCY 304 (310)
T ss_pred HHH
Confidence 543
No 176
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.39 E-value=1.3e-05 Score=83.36 Aligned_cols=129 Identities=11% Similarity=0.078 Sum_probs=96.9
Q ss_pred hhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccc
Q 009538 321 IFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSL 400 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (532)
....+...++.|+.++ +.||++|| +.+..+.++.+++.+..... .
T Consensus 62 ~~~~~~~~~~~~~~g~----l~Dr~grr-------~~~~~~~~~~~~~~~~~~~~------------------------~ 106 (394)
T PRK10213 62 TVTAFVAMFASLFITQ----TIQATDRR-------YVVILFAVLLTLSCLLVSFA------------------------N 106 (394)
T ss_pred HHHHHHHHHHHHHHHH----HhcccCcH-------HHHHHHHHHHHHHHHHHHHH------------------------C
Confidence 3455555666666444 36666655 67778888887777666543 3
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.++++..-++.|++.+...+....++.|.+|++.|+.++++......+|..+++.+.+.+.+..
T Consensus 107 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~--------------- 171 (394)
T PRK10213 107 SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI--------------- 171 (394)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------
Confidence 57777778889999999988999999999999999999999999999999999999999887532
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 009538 481 GRLDYFYYLVAALGLLNFGF 500 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~ 500 (532)
++.+.|+..+++.++..+.
T Consensus 172 -gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 172 -GWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred -CHHHHHHHHHHHHHHHHHH
Confidence 2456776666655554433
No 177
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.38 E-value=7.5e-06 Score=83.36 Aligned_cols=117 Identities=14% Similarity=0.102 Sum_probs=87.6
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.......++..+..|+.+++ .||+++| +.+..+.++..++.+....... .
T Consensus 38 ~~~~~~~~~~~i~~~~~G~l----~dr~g~r-------~~~~~~~~~~~~~~~~~~~~~~-------------------~ 87 (365)
T TIGR00900 38 LAALAGMLPYVVLSPIAGAL----ADRYDRK-------KVMIGADLIRAVLVAVLPFVAL-------------------L 87 (365)
T ss_pred HHHHHHHHHHHHHHHhhhHH----HHhhchh-------HHHHHHHHHHHHHHHHHHHHHH-------------------c
Confidence 34455556666666665554 7776665 5666676666666555554421 0
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
...+.+.+....++.+++.+...+...+++.|.+|++.|++.+++.+....+|..+++.+.+.+.+.
T Consensus 88 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 154 (365)
T TIGR00900 88 GGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT 154 (365)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1136677778888899999999999999999999999999999999999999999999999888653
No 178
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.38 E-value=3.3e-06 Score=88.08 Aligned_cols=139 Identities=12% Similarity=0.061 Sum_probs=95.9
Q ss_pred chhhhHHHHHHHHH-HHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSG-TTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~-~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++.+.+++.+.... +..++.+++|++.||+ |||+.+.++.+...+..+........+ .
T Consensus 243 ~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~--------------------~ 301 (402)
T PRK11902 243 SAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP--------------------K 301 (402)
T ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC--------------------C
Confidence 45566777665544 5778999999999995 999998888877776655443211101 1
Q ss_pred hHHHHHHHH----HHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhh
Q 009538 81 QLAFLFTGL----GLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWG 156 (532)
Q Consensus 81 ~~~~l~~~r----~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~ 156 (532)
+.+.+++.- +..|++.+...+....++.+.+|. + ..+.+....++|..+++.++|++.+++||++.
T Consensus 302 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~ 371 (402)
T PRK11902 302 HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA----T------QYALLSALASVGRVYVGPTSGYLVEAYGWPGF 371 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH----H------HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 233344333 456677777788788888887652 1 24555556678887677789999999999999
Q ss_pred hHHHHHHHHHHHHHH
Q 009538 157 LGIPAFMMFLSCAMF 171 (532)
Q Consensus 157 F~v~~~~~~l~~~~~ 171 (532)
|.+.++..+++.++.
T Consensus 372 f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 372 YLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888776665544
No 179
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.38 E-value=3e-06 Score=88.99 Aligned_cols=129 Identities=14% Similarity=0.024 Sum_probs=89.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+.+.++..++.+++|+++||+ |||+.+..+.++..++.++...... .+
T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 320 (426)
T PRK12307 264 DTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQ----------------------DN 320 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHcc----------------------cc
Confidence 445667777888888999999999999995 9999999888777666554443221 11
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v 159 (532)
...+....+..+++.....+..+.++.|.+|+ +.+++.+++.+...++|..+||.+.|++.++.|+....++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 321 YLLLGACLFGLMATNVGVGGLVPKFLYDYFPL------EVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHhCcH------HHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 21122222222222233345566778898874 2335679998999999999999999999998887654443
No 180
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.37 E-value=1.4e-05 Score=85.93 Aligned_cols=139 Identities=12% Similarity=0.076 Sum_probs=102.5
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
+......++.....+..+++ .||+++| +.+..+.++..++.+.++..
T Consensus 45 ~~~~~~~l~~~~~~~~~G~l----~D~~Grk-------~~l~~~~~~~~~~~~~~~~a---------------------- 91 (495)
T PRK14995 45 WIIDIYSLVMAGMVLPMGAL----GDRIGFK-------RLLMLGGTLFGLASLAAAFS---------------------- 91 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHhccH-------HHHHHHHHHHHHHHHHHHHc----------------------
Confidence 33444555555666665554 6776665 67788888888887776654
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQF-PENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPE 476 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~-P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~ 476 (532)
.+.+.++..-++.|+|.+...+.....+.+.+ |++.|++++|+......+|..+++.+.+.+.+..
T Consensus 92 --~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~----------- 158 (495)
T PRK14995 92 --PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF----------- 158 (495)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----------
Confidence 36777788888999999988888777776665 7899999999999999999999999999987643
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 477 DLNKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
++.+.|++...+.++.++..+...++
T Consensus 159 -----gwr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 159 -----YWGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred -----ChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 23567777766666666655555444
No 181
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.37 E-value=2e-06 Score=87.00 Aligned_cols=146 Identities=15% Similarity=0.106 Sum_probs=105.0
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYF-GRYKTLGFASVASFLGMLVLSL-TAAISKLHPPDCGNQDSGACPGPT 78 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~-Grr~~l~~~~~~~~ig~il~~~-a~~~~~~~~~~~~~~~~~~~~~~~ 78 (532)
+|..++++.++.|-++...+++++||++||+| |||....+.+.+....+++.-. +++
T Consensus 285 ~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~--------------------- 343 (448)
T COG2271 285 FSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPN--------------------- 343 (448)
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCC---------------------
Confidence 46778999999999999999999999999999 8887766554444444433333 221
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhH-HHHHHHHhhhhccccccchhhh
Q 009538 79 PWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTF-AMMISLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 79 ~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~-G~~~g~~~~g~i~~~~gw~~~F 157 (532)
.|+.+..+.-+.+|+-.-+-...+-....|..|+ ...+++.+...++..+ |.+.+...-|++.+.+||...|
T Consensus 344 -~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK------~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~F 416 (448)
T COG2271 344 -GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPK------KAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGF 416 (448)
T ss_pred -ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccH------hhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchH
Confidence 2566777777777777754445455556675442 2234577777778888 8888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 009538 158 GIPAFMMFLSCAMFFLG 174 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~ 174 (532)
.+-.+..+++.+.++..
T Consensus 417 i~~~~~a~l~~lll~~~ 433 (448)
T COG2271 417 IVLSIAALLAILLLLPV 433 (448)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 98777666665555444
No 182
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.37 E-value=1.1e-05 Score=84.35 Aligned_cols=129 Identities=14% Similarity=0.008 Sum_probs=93.3
Q ss_pred hhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHH
Q 009538 326 GLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWL 405 (532)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (532)
...+..++.++ +.||+++| +.+..+.++.+++++.+... .+.|++
T Consensus 58 ~~~~~~~~~G~----l~dr~g~k-------~~l~~~~~~~~~~~~~~~~~------------------------~~~~~l 102 (400)
T PRK11646 58 IQQGLGIFGGA----IADRFGAK-------PMIVTGMLMRAAGFATMAIA------------------------HEPWLL 102 (400)
T ss_pred HHHHHHhhhhH----HHHHhCch-------HHHHHHHHHHHHHHHHHHHh------------------------ccHHHH
Confidence 33333455333 36666655 56777888888777766543 256777
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHH
Q 009538 406 IPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDY 485 (532)
Q Consensus 406 i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (532)
+...++.+++.+...+...+++.+.+|++.|++++|+......+|..+++.+.+.+.+. ++.+
T Consensus 103 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~-----------------g~~~ 165 (400)
T PRK11646 103 WLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY-----------------DFRL 165 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------hHHH
Confidence 77788889999888888899999999999999999999999999999999999988631 2455
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 009538 486 FYYLVAALGLLNFGFFLLCAK 506 (532)
Q Consensus 486 ~~~~~~~~~vv~~~~~~~~~~ 506 (532)
.|+..+++.++..+......+
T Consensus 166 ~f~~~~~~~~~~~i~~~~~~~ 186 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAWLLP 186 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 666666555555444333333
No 183
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.36 E-value=2.9e-06 Score=90.70 Aligned_cols=140 Identities=13% Similarity=0.012 Sum_probs=84.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchH-----HHH--HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYK-----TLG--FASVASFLGMLVLSLTAAISKLHPPDCGNQDSGAC 74 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~-----~l~--~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~ 74 (532)
+..+++.+.+.+.++..++.+++|+++||+ |||+ ... +..++.++..++.....
T Consensus 286 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~------------------ 346 (476)
T PLN00028 286 SLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQTLGGVFCIWLGRAN------------------ 346 (476)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHHHHHHHHHHhcccc------------------
Confidence 456788889999999999999999999995 9762 222 22222222222222221
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccch
Q 009538 75 PGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWA 154 (532)
Q Consensus 75 ~~~~~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~ 154 (532)
+.+...+.-++.+++.+...+...+++.+..| +.++...++.....++|..++|.+.+ .....+|+
T Consensus 347 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~ 412 (476)
T PLN00028 347 ------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR-------RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTE 412 (476)
T ss_pred ------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-------hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHh
Confidence 23344445555666655555555555566432 23355677766666666666665543 22345799
Q ss_pred hhhHHHHHHHHHHHHHHHhh
Q 009538 155 WGLGIPAFMMFLSCAMFFLG 174 (532)
Q Consensus 155 ~~F~v~~~~~~l~~~~~~~~ 174 (532)
..|++.++..+++.++.++.
T Consensus 413 ~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 413 TGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hHHHHHHHHHHHHHHHHHhe
Confidence 99999887777776655544
No 184
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.36 E-value=1.1e-05 Score=83.76 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=97.4
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
.....++..++.|+.+++ .||+++| +.+..+.++..++.......
T Consensus 44 ~~~~~~~~~~~~~~~G~l----~Dr~g~r-------~~l~~~~~~~~i~~~~~~~~------------------------ 88 (392)
T PRK10473 44 FSVYLAGMAAAMLFAGKI----ADRSGRK-------PVAIPGAALFIIASLLCSLA------------------------ 88 (392)
T ss_pred HHHHHHHHHHHHHhHhHH----HHHhCCh-------HHHHHHHHHHHHHHHHHHHh------------------------
Confidence 344455556666665554 6776655 56667777777666655543
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCc
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLN 479 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (532)
.+.+.++...++.+++.+...+..+.++.|.+|++.|++.+++.+....++..+++.+.+.+.+..
T Consensus 89 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-------------- 154 (392)
T PRK10473 89 ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-------------- 154 (392)
T ss_pred CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--------------
Confidence 245566667788899888888888999999999999999999999999999999998887765422
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009538 480 KGRLDYFYYLVAALGLLNFGFFLLCAKWY 508 (532)
Q Consensus 480 ~~~~~~~~~~~~~~~vv~~~~~~~~~~~~ 508 (532)
++.+.|++.+++.++..+......++.
T Consensus 155 --g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 155 --PWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 235567777766666665554444543
No 185
>PRK09669 putative symporter YagG; Provisional
Probab=98.36 E-value=2.2e-06 Score=90.66 Aligned_cols=125 Identities=16% Similarity=0.164 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHH
Q 009538 7 TTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLF 86 (532)
Q Consensus 7 ~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 86 (532)
+.+...+.+...++.+++++++||+ |||+.+..+.+..++..+...+.+ ..+...++
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~ 323 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFIP----------------------PSNVWLIF 323 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhC----------------------cchHHHHH
Confidence 3444455566678889999999996 999999998877765444333321 12566678
Q ss_pred HHHHHHHHhccccccccccccccCCCCCCC-CcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccch
Q 009538 87 TGLGLMVIGAGGIRPCNLAFGADQFNPNTE-SGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWA 154 (532)
Q Consensus 87 ~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~-~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~ 154 (532)
+..++.|+|.+...+...++++|..+.++. .+++.-+..++.+.+...+|..+|+.++|++.+..|+.
T Consensus 324 ~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 324 ALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888999999999999999999998763332 23344467788999999999999999999987766663
No 186
>PRK09848 glucuronide transporter; Provisional
Probab=98.34 E-value=2.4e-06 Score=90.48 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=93.5
Q ss_pred HHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009538 13 FSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLM 92 (532)
Q Consensus 13 ~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 92 (532)
..++..++.++.++++||+ |+|+++.++.+++.++.++..+.+. .+.+.+++..++.
T Consensus 273 ~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~~~~~~~~~~----------------------~~~~~~~~~~~l~ 329 (448)
T PRK09848 273 NLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCGYLLFFWVSV----------------------WSLPVALVALAIA 329 (448)
T ss_pred HHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCc----------------------hhHHHHHHHHHHH
Confidence 3455677899999999996 9999999999999998887776421 2456677788899
Q ss_pred HHhccccccccccccccCCCCCCC-CcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccc
Q 009538 93 VIGAGGIRPCNLAFGADQFNPNTE-SGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSW 153 (532)
Q Consensus 93 G~g~g~~~p~~~~~i~d~f~~~~~-~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw 153 (532)
|+|.+...+...++.+|..++++. .+++..+..++.+.+...+|..+|+.+.+.+.+..||
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999998764332 2234457788899999999999999998887655554
No 187
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.34 E-value=4.1e-06 Score=89.44 Aligned_cols=139 Identities=13% Similarity=0.158 Sum_probs=102.5
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.......++..++.++.+++ .||+++| +.+..+.++..++.+..+..
T Consensus 41 ~~~~~~~~~~~~~~~~~g~l----~dr~g~r-------~~~~~~~~~~~~~~~~~~~~---------------------- 87 (485)
T TIGR00711 41 WVITSYMLANAISIPLTGWL----AKRFGTR-------RLFLISTFAFTLGSLLCGVA---------------------- 87 (485)
T ss_pred HHHHHHHHHHHHHHHhHHHH----HHHhCcH-------HHHHHHHHHHHHHHHHHhCc----------------------
Confidence 44455566666666765554 6666655 56777777777776665543
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
.+.+.++...++.|++.+...+..+.++.|.+|++.|+++++++.....+|..+++.+.+.+.+.. +|
T Consensus 88 --~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------~w---- 155 (485)
T TIGR00711 88 --PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY------HW---- 155 (485)
T ss_pred --CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc------Cc----
Confidence 356777788899999999999999999999999999999999999999999999999998887532 22
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
.+.|+..+.+.++..+...+..++
T Consensus 156 ------~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 156 ------RWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred ------eehhhhhhHHHHHHHHHHHHHcCC
Confidence 346666666666665555554444
No 188
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.32 E-value=1.3e-05 Score=84.05 Aligned_cols=135 Identities=12% Similarity=0.083 Sum_probs=97.3
Q ss_pred hhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchH
Q 009538 323 SMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSG 402 (532)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (532)
..++..++.++. .++.||++|| +.+..+.++.+++.+..... .+.
T Consensus 60 ~~~~~~~~~~~~----G~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~a------------------------~~~ 104 (413)
T PRK15403 60 YLAGGMALQWLL----GPLSDRIGRR-------PVLITGALIFTLACAATLFT------------------------TSM 104 (413)
T ss_pred HHHHHHHHHHhh----hHHHHHcCch-------HHHHHHHHHHHHHHHHHHHc------------------------CCH
Confidence 344445555553 3347777766 56777777777776665543 356
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchh
Q 009538 403 LWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGR 482 (532)
Q Consensus 403 ~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (532)
++++..-++.|++++...+..+.+..|.+|++.+++.+++.+....++..+++.+.+.+.+.. +
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~----------------g 168 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV----------------H 168 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------C
Confidence 777778888999888767777788889999999999999999999999999998888776432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009538 483 LDYFYYLVAALGLLNFGFFLLCAKWY 508 (532)
Q Consensus 483 ~~~~~~~~~~~~vv~~~~~~~~~~~~ 508 (532)
+.+.|+..+++.++..+..+...++.
T Consensus 169 w~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 169 WKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 45677777777777665555444554
No 189
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.31 E-value=2.7e-06 Score=87.08 Aligned_cols=139 Identities=12% Similarity=0.039 Sum_probs=97.2
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.......++..++.++.+++ .||+++| +.+..+.++.+++.++....
T Consensus 34 ~~~~~~~~~~~~~~~~~g~l----~dr~g~r-------~~~~~~~~~~~~~~~~~~~~---------------------- 80 (379)
T TIGR00881 34 LLLSSFSIAYGISKFVMGSV----SDRSNPR-------VFLPIGLILCAIVNLFFGFS---------------------- 80 (379)
T ss_pred HHHHHHHHHHHhhhhhhhHH----HHhhCCe-------ehhHHHHHHHHHHHHHHHHh----------------------
Confidence 33444555555556664444 7777666 46777777777777666654
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHH-HHHHhcccccCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGF-LISMVHRFTKGASTGDWLPE 476 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~-~~~~~~~~~~~~~~~~~~~~ 476 (532)
.+.+.++...++.+++.+...+..++++.|.+|++.|++++++.+....+|..+++. +.+.+.+.. +
T Consensus 81 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~---- 148 (379)
T TIGR00881 81 --TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY------S---- 148 (379)
T ss_pred --hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC------C----
Confidence 256777778888999999999999999999999999999999999999999999994 544443321 1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 477 DLNKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
..+.|+..+++.++..+..++..++
T Consensus 149 ------~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 149 ------WHWVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred ------chhHHHHHHHHHHHHHHHHheeeCC
Confidence 2345666666666655555544443
No 190
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.29 E-value=1.9e-05 Score=81.26 Aligned_cols=136 Identities=14% Similarity=0.135 Sum_probs=97.9
Q ss_pred hhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccc
Q 009538 321 IFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSL 400 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (532)
....++..++.++.+++ .||+++| +.+..+.++.+++....... .
T Consensus 33 ~~~~~~~~~~~~~~g~l----~d~~g~~-------~~~~~~~~~~~i~~~~~~~~------------------------~ 77 (377)
T PRK11102 33 SAYILGFAIGQLFYGPM----ADSFGRK-------PVILGGTLVFALAAVACALA------------------------Q 77 (377)
T ss_pred HHHHHHHHHHHHhhchH----HhhcCCh-------HHHHHHHHHHHHHHHHHHHH------------------------c
Confidence 34445555556664443 6666555 56777887777777666553 2
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.+.++...++.+++.+...+...+++.|.+|++.|++.+++.+....+|..+++.+.+.+.+..
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--------------- 142 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF--------------- 142 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------------
Confidence 45566677788899998888888999999999999999999999999999999999988886532
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
++.+.|+..+++.++..+......++
T Consensus 143 -~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 143 -SWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 23456666666666665554444444
No 191
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.28 E-value=3.7e-06 Score=88.86 Aligned_cols=144 Identities=9% Similarity=-0.061 Sum_probs=88.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHH---HHHHHHhhcccCCCCCCCCCCCCCCCCCC
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGM---LVLSLTAAISKLHPPDCGNQDSGACPGPT 78 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~---il~~~a~~~~~~~~~~~~~~~~~~~~~~~ 78 (532)
++.+++++...+.+...++.+++|+++||+ |+++....+.....+.. ++....+.
T Consensus 285 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 342 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVTIAVIVYWMNPA--------------------- 342 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHHHHHHhcCC---------------------
Confidence 456678888889999999999999999995 76543333333322221 11111100
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHH-HHHHHHhhhhccccccchhhh
Q 009538 79 PWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFA-MMISLTVIVYVQSDVSWAWGL 157 (532)
Q Consensus 79 ~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G-~~~g~~~~g~i~~~~gw~~~F 157 (532)
.+.....+..++.|++.....+.......|.+|+ +.++++.++.+...++| .++||.++|++.++.||.+.|
T Consensus 343 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~ 415 (438)
T TIGR00712 343 -GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPK------KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 415 (438)
T ss_pred -CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcCh------hheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHH
Confidence 1222333444445554322212222345677664 22345788888777876 578999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 009538 158 GIPAFMMFLSCAMFFLG 174 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~ 174 (532)
++.+...+++.+..+..
T Consensus 416 ~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 416 MVMIGGSILAVILLIVV 432 (438)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88776655555544443
No 192
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.27 E-value=7.2e-06 Score=86.36 Aligned_cols=128 Identities=17% Similarity=0.151 Sum_probs=106.8
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHH
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLA 83 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (532)
...+.+..++.+...++.+++++++||+ ||||++..+.++++++.++..+... .+.+
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~ 316 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAALGFLLLFFLGP----------------------GSPW 316 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHHHHHHHHHHHh----------------------hhHH
Confidence 3456777788888999999999999996 9999999999999999999888741 2678
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCCC-cccchhhhhhhhHHHHhHHHHHHHHhhhhccccccch
Q 009538 84 FLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTES-GKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWA 154 (532)
Q Consensus 84 ~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~-~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~ 154 (532)
.+++.-++.|+|.|...+...++++|..+..+.+ +++.-+..++.+.+...+|..+++.+.+.+.+..|+.
T Consensus 317 ~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 317 LVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 8999999999999999999999999987644322 3345578999999999999999999988876544443
No 193
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.27 E-value=5.3e-06 Score=81.17 Aligned_cols=132 Identities=21% Similarity=0.243 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHH
Q 009538 5 TATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAF 84 (532)
Q Consensus 5 ~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (532)
+.+++.+.+.+...++.++.|.++||+ |||+.+..+...+.++.+++++..+ .+...
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~ 96 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN----------------------VGLAL 96 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc----------------------chHHH
Confidence 578899999999999999999999996 9999999998887777777777642 24788
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHH-HHhHHHHHHHHhhhhcccc--ccchhhhHHHH
Q 009538 85 LFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYF-TFTFAMMISLTVIVYVQSD--VSWAWGLGIPA 161 (532)
Q Consensus 85 l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~-~~~~G~~~g~~~~g~i~~~--~gw~~~F~v~~ 161 (532)
+++.|.++|++.|...|...+++.|.+++ . ..++...+.... ...+|..++|.+++.+... .+|++.|.+..
T Consensus 97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (338)
T COG0477 97 LLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAA 171 (338)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999999764 1 234556777666 5778888888777776643 68999777665
Q ss_pred HHH
Q 009538 162 FMM 164 (532)
Q Consensus 162 ~~~ 164 (532)
...
T Consensus 172 ~~~ 174 (338)
T COG0477 172 LLG 174 (338)
T ss_pred HHH
Confidence 543
No 194
>TIGR00898 2A0119 cation transport protein.
Probab=98.27 E-value=4.8e-06 Score=89.55 Aligned_cols=128 Identities=13% Similarity=-0.006 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 009538 12 IFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGL 91 (532)
Q Consensus 12 ~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 91 (532)
.+.+....+.++++++.||+ |||+.+.++.++.+++.++..+.++ .+....++.-++
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~----------------------~~~~~~~~~~~~ 419 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV----------------------DLYFLRTALAVL 419 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC----------------------CchHHHHHHHHH
Confidence 34445567888999999995 9999999999998888887776532 112334455566
Q ss_pred HHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHH
Q 009538 92 MVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAM 170 (532)
Q Consensus 92 ~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~ 170 (532)
.+++.+...+....+..|.+|+ +.|++.+++......+|.+++|.+.+ +. ..++...|++.+...+++.++
T Consensus 420 ~~~~~~~~~~~~~~~~~e~~p~------~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 420 GKFGITSAFQMVYLYTAELYPT------VVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHhcccccH------HHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHH
Confidence 6777777778888999999875 23356789999999999999999988 43 456677777766655554443
No 195
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.26 E-value=1.1e-05 Score=85.13 Aligned_cols=143 Identities=10% Similarity=-0.109 Sum_probs=81.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSL-TAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+..+.+.+.+.......++.++.|+++||+ |||+.+.++.++..+..+.... .... .
T Consensus 277 s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 334 (432)
T PRK10406 277 HANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSALQNV---------------------S 334 (432)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHcC---------------------C
Confidence 345667777777777788889999999995 9999888776654443332211 1100 0
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhH-HHHHHHHhhhhccccccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTF-AMMISLTVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~-G~~~g~~~~g~i~~~~gw~~~F~v 159 (532)
+....+..-.+.+++.+...+....+..|.||++ .|++.+++.+...+. .....|.+.+++....+|...++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~------~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~ 408 (432)
T PRK10406 335 SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ------VRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWY 408 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------ccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHH
Confidence 1111111112222333334455667889999852 234578877665554 233477777766543335556665
Q ss_pred HHHHHHHHHHHHH
Q 009538 160 PAFMMFLSCAMFF 172 (532)
Q Consensus 160 ~~~~~~l~~~~~~ 172 (532)
.++..+++.+..+
T Consensus 409 ~~~~~~i~~~~~~ 421 (432)
T PRK10406 409 VTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555544433
No 196
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.26 E-value=2.9e-06 Score=86.87 Aligned_cols=120 Identities=12% Similarity=0.069 Sum_probs=91.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhcccc-chHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFG-RYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~G-rr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
|..+.+.+.+.+.++..++.++.|+++|| +| ||+.+.++..+.+++.+++.+..+
T Consensus 230 ~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 285 (355)
T TIGR00896 230 SAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLVGLCGLLFAPM----------------------- 285 (355)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHHHHHHHHHhhh-----------------------
Confidence 45678889999999999999999999999 55 566777888888888877776531
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS 152 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g 152 (532)
+. .. ..-++.|+|.|...|...+.+.+..+++ +.++...++.+...++|..+||.+.|++.++.|
T Consensus 286 ~~-~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 286 HG-LW-AWALVLGLGQGGAFPLALTLIGLRSRQA-----AQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred hH-HH-HHHHHHHHhhhhHhHHHHHHHHHhccCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 11 1346789999999998877777654431 223456777788888999999999999988765
No 197
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.25 E-value=1.8e-05 Score=84.53 Aligned_cols=128 Identities=14% Similarity=0.052 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 6 ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 6 ~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
.+.+.+...+...++.++.++++||+ |||+++.++.++.+++.+...+....+ +.+...+
T Consensus 268 ~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 327 (473)
T PRK10429 268 FPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVLSCGVLLLMGLAA-------------------PHNALLI 327 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhccC-------------------chhHHHH
Confidence 34455555577888999999999996 999999999988887776654421000 1245567
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCC-CCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccc
Q 009538 86 FTGLGLMVIGAGGIRPCNLAFGADQFNPNT-ESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSW 153 (532)
Q Consensus 86 ~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~-~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw 153 (532)
++.-++.|++.+...+...++++|..+..+ +.++|.-+..++.+.+...+|..+|+.+.|++.+..|+
T Consensus 328 ~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 328 VIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777788999999999999999999865332 23334446788999999999999999999998765655
No 198
>TIGR00895 2A0115 benzoate transport.
Probab=98.22 E-value=6.3e-06 Score=85.01 Aligned_cols=110 Identities=15% Similarity=0.221 Sum_probs=82.6
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
.....++..++.++.+++ .||+++| +.+..+..+.+++.+.....
T Consensus 58 ~~~~~~~~~~~~~~~g~l----~d~~g~~-------~~~~~~~~~~~~~~~~~~~~------------------------ 102 (398)
T TIGR00895 58 FSAGLIGMAFGALFFGPL----ADRIGRK-------RVLLWSILLFSVFTLLCALA------------------------ 102 (398)
T ss_pred HHHHHHHHHHHHHHhHHH----HHHhhhH-------HHHHHHHHHHHHHHHHHHHc------------------------
Confidence 334444555555554443 6665544 56667777766666555543
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
.+.+.+++..++.+++.+...+...+++.|.+|++.|++++++......+|..+++.+.+.+.+.
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 25666777788899999999999999999999999999999999999999999999999888653
No 199
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.22 E-value=8.5e-06 Score=87.53 Aligned_cols=139 Identities=15% Similarity=0.052 Sum_probs=116.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++...|.+.+++.+|..++.++.+++.+++ ++++.+..+.++++++.+..++++ +
T Consensus 252 ~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~lal~~------------------------~ 306 (524)
T PF05977_consen 252 GASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLLALSP------------------------S 306 (524)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHHhcch------------------------H
Confidence 456779999999999999999999999995 999999999999999988888875 5
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
.+..++..++.|++.........+.+-+..|+ +.+++.++++++....+..+|..+.|++.+.+|-+..+.+.+
T Consensus 307 ~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~------~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~ 380 (524)
T PF05977_consen 307 FWLALIALFLAGAAWIIANSSLNTLVQLSVPD------WVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAG 380 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 66777888899998888777777777676553 345669999999999999999999999999999999998887
Q ss_pred HHHHHHHHHH
Q 009538 162 FMMFLSCAMF 171 (532)
Q Consensus 162 ~~~~l~~~~~ 171 (532)
+.+++..++.
T Consensus 381 ~~lll~~~~~ 390 (524)
T PF05977_consen 381 AALLLSALIA 390 (524)
T ss_pred HHHHHHHHHH
Confidence 7665555543
No 200
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.19 E-value=1e-05 Score=95.99 Aligned_cols=131 Identities=15% Similarity=0.058 Sum_probs=103.9
Q ss_pred chh-hhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 2 KSI-TATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 2 ~~~-~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+.. +.+++.+.+.++..++.+++|+++||+ ++++++.++.++.+++.++..++.
T Consensus 266 s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 320 (1146)
T PRK08633 266 DNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSLFLLPTAP------------------------ 320 (1146)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHHHHHHHhh------------------------
Confidence 345 678888999999999999999999996 999999999888888888777763
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-cccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS-DVSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~-~~gw~~~F~v 159 (532)
+...+++..++.|++.++..+...+++.+.+|+ +.++++++++.+..++|.++++.+++.+.. .+++...|++
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~------~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~ 394 (1146)
T PRK08633 321 SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE------KELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYL 394 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 456777888999999999988888999887764 233568999999999999888888777653 2455556665
Q ss_pred HHHH
Q 009538 160 PAFM 163 (532)
Q Consensus 160 ~~~~ 163 (532)
.+.+
T Consensus 395 ~~~~ 398 (1146)
T PRK08633 395 IALV 398 (1146)
T ss_pred HHHH
Confidence 4443
No 201
>PRK10133 L-fucose transporter; Provisional
Probab=98.19 E-value=1e-05 Score=85.57 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=100.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+++.+++.....+.+++.++.+++|++.||+ ||||++..+..+..++.++..+..
T Consensus 292 ~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~------------------------ 346 (438)
T PRK10133 292 MTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLISAFAG------------------------ 346 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHcC------------------------
Confidence 3567889999999999999999999999995 999999998888777766655542
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F~v 159 (532)
+. .-+.+-.+.|+|.+...|...+...+.++++. + ...++.. ....|..++|.+.|++.+..| -|..|++
T Consensus 347 ~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~--~-----~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 347 GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT--K-----YGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh--c-----cchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHH
Confidence 11 12445677899999999999999999875421 1 1233332 233578888888999988887 7889988
Q ss_pred HHHHHHHHHH
Q 009538 160 PAFMMFLSCA 169 (532)
Q Consensus 160 ~~~~~~l~~~ 169 (532)
..+..+....
T Consensus 418 ~~~~~~~~~~ 427 (438)
T PRK10133 418 PALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHH
Confidence 7766554433
No 202
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.17 E-value=5.5e-05 Score=77.42 Aligned_cols=111 Identities=12% Similarity=0.125 Sum_probs=79.1
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
.......++..+..++.+++ .||+++| +.+.++.++..++.++.....
T Consensus 41 ~~~~~~~~~~~~~~~~~g~l----~dr~g~r-------~~~~~~~~~~~i~~~~~~~~~--------------------- 88 (366)
T TIGR00886 41 NLVAVPVLAGAVLRIILGFL----VDKFGPR-------YTTTLSLLLLAIPCLWAGLAV--------------------- 88 (366)
T ss_pred HhhHHHHHHHHHHHHHHHHH----HHHhCch-------HHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 34445555566666664444 7777666 567778888888777666541
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
.+.+.+++..++.|++.+.. +....++.+.+|++.|++.+++......+|..+++.+.+.+..
T Consensus 89 --~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 89 --QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred --hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 14566667778888886654 4567899999999999999999988888888888777766543
No 203
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.15 E-value=1.5e-05 Score=84.91 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=95.0
Q ss_pred hhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccc
Q 009538 321 IFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSL 400 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (532)
....++..++.++.+++ .+|+++| +.+..+.++.+++.++..... ..
T Consensus 83 s~~~~~~~~~~~~~g~l----~dr~g~r-------~~l~~~~~~~~~~~~~~~~~~----------------------~~ 129 (465)
T TIGR00894 83 SSHFYGQIIIQIPVGYL----AGKYVFK-------WSIGIGMFLSSVISIVIPWAA----------------------GG 129 (465)
T ss_pred HHHHHHHHHHHcchHHH----HHHhCcc-------hhhHHHHHHHHHHHHHHHHHH----------------------Hc
Confidence 33444555555554443 6776666 466667766666655544321 12
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.++++..-++.|++++...+....++.|.+|++.|++++++.+....+|..+++.+.+.+.+.. .+|
T Consensus 130 ~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~-----~gw------- 197 (465)
T TIGR00894 130 GIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW-----GGW------- 197 (465)
T ss_pred CchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCC-------
Confidence 45567777889999999999999999999999999999999999999999999999998886531 023
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLCA 505 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~~ 505 (532)
...|++.+++.++..+..+...
T Consensus 198 ---~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 198 ---PMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred ---CeehhhhhHHHHHHHHHHHHHh
Confidence 3456666666665555444443
No 204
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.14 E-value=2.9e-05 Score=81.73 Aligned_cols=145 Identities=10% Similarity=-0.018 Sum_probs=96.2
Q ss_pred HHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009538 14 SGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMV 93 (532)
Q Consensus 14 ~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 93 (532)
.+...+..+++|+|+||+ |+||++.++.+...+......... |. ....++..+.+.-+...
T Consensus 296 ~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~~~~~l~l--p~----------------~~~~~~~~~~~~~~~l~ 356 (462)
T PRK15034 296 PFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFSALLFLTL--PG----------------TGSGNFIAFYAVFMGLF 356 (462)
T ss_pred HHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHh--cc----------------ccccHHHHHHHHHHHHH
Confidence 455778889999999996 999999999988888775543331 10 00124566666655555
Q ss_pred HhccccccccccccccCCCCCCC---------------CcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-cccchhhh
Q 009538 94 IGAGGIRPCNLAFGADQFNPNTE---------------SGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS-DVSWAWGL 157 (532)
Q Consensus 94 ~g~g~~~p~~~~~i~d~f~~~~~---------------~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~-~~gw~~~F 157 (532)
+..|.-...+..++.++||+++. +.+++-+...++......+|.++-|.+.|...+ .-++...|
T Consensus 357 ~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~ 436 (462)
T PRK15034 357 LTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAM 436 (462)
T ss_pred HHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHH
Confidence 55555555666677777753100 111245667777777888878888866555544 34688889
Q ss_pred HHHHHHHHHHHHHHHhhcce
Q 009538 158 GIPAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~~~~ 177 (532)
+...+..+++.++-|..+-|
T Consensus 437 ~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 437 KVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99888888888877665544
No 205
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.13 E-value=2.8e-05 Score=83.68 Aligned_cols=128 Identities=16% Similarity=0.065 Sum_probs=83.7
Q ss_pred HHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009538 15 GTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVI 94 (532)
Q Consensus 15 ~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 94 (532)
++..++.+++++++||+ |||++++++..+.+++.++.++..... .+...+...-+...+
T Consensus 346 ~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~~~~~~~~l~~~~~~~--------------------~~~~~~~~~~~~~~~ 404 (502)
T TIGR00887 346 AGTVPGYWVTVFLVDII-GRKPIQLMGFFILTVLFFVLGFAYNHL--------------------STHGFLAIYVLAQFF 404 (502)
T ss_pred HHHHHHHHHHHHHhhhh-cchhHHHHHHHHHHHHHHHHHHHHHhc--------------------chhHHHHHHHHHHHH
Confidence 34555778899999995 999999999888888777666542100 001111111122222
Q ss_pred hccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc----------ccchhhhHHHHHHH
Q 009538 95 GAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD----------VSWAWGLGIPAFMM 164 (532)
Q Consensus 95 g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~----------~gw~~~F~v~~~~~ 164 (532)
+.....+....+.+|.+|+ +.|++.+++.+....+|.+++|.+.+++.+. .++...|++.++..
T Consensus 405 ~~~~~~~~~~~~~~E~~p~------~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 478 (502)
T TIGR00887 405 ANFGPNATTFIVPGEVFPT------RYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFM 478 (502)
T ss_pred HhcCCCchhhhhhhccCch------hHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHH
Confidence 2223345566778999875 3446789999999999999999999988763 34455677666655
Q ss_pred HHHHH
Q 009538 165 FLSCA 169 (532)
Q Consensus 165 ~l~~~ 169 (532)
+++.+
T Consensus 479 ~~~~i 483 (502)
T TIGR00887 479 FLGIL 483 (502)
T ss_pred HHHHH
Confidence 55544
No 206
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.12 E-value=5.9e-05 Score=77.79 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.++++..-++.|+|++.. +.......|.+|++.|++++++.+....+|..+++.+.+.+.+.. +
T Consensus 78 ~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~------g-------- 142 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG------G-------- 142 (368)
T ss_pred cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------c--------
Confidence 6778888889999999864 455667799999999999999999999999999999988886532 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLCAKWY 508 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~~~~~ 508 (532)
..+.|+..+++.++..+..+...|+.
T Consensus 143 --Wr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 143 --LQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 35577777777777766666555553
No 207
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.11 E-value=0.00021 Score=74.45 Aligned_cols=142 Identities=11% Similarity=0.151 Sum_probs=97.0
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
+...+.+..+=++.-++. .++++|+++- +.+..|+.+..+=+..+...
T Consensus 409 Gv~~a~~~~gEI~~~ffs----~klI~kiGHv-------~v~~lgLa~~~~Rf~~~S~L--------------------- 456 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFS----FKLIEKIGHV-------NVMYLGLACNVGRFLYYSYL--------------------- 456 (618)
T ss_pred eehhhhhccchHHHHHHH----HHHHHHhccc-------ceeeehhhHHHHHHHHHHHh---------------------
Confidence 344555555555555553 3446665533 56666777766666666655
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHH-HHHHHHHHHHHHHHHHHhcccccCCCCCCCCC
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLA-FVGFAISNYLNGFLISMVHRFTKGASTGDWLP 475 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~-~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~ 475 (532)
.++|..++.-++.++-.+.++.+.-+|+...+|+++|.+++++. ...-.+|-.+|+.+.|.+....+
T Consensus 457 ---~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg--------- 524 (618)
T KOG3762|consen 457 ---QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG--------- 524 (618)
T ss_pred ---cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh---------
Confidence 37888899999999999999999999999999999999999997 44556677777777666654321
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009538 476 EDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYK 509 (532)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~ 509 (532)
.-..|..+++.+++.++.+...-+..+
T Consensus 525 -------~~ttf~~~giAcl~~l~~~~~iq~~l~ 551 (618)
T KOG3762|consen 525 -------ARTTFRIFGIACLVTLALFISIQLLLK 551 (618)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 234666666666666666555544333
No 208
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.08 E-value=0.0013 Score=67.51 Aligned_cols=128 Identities=12% Similarity=0.040 Sum_probs=85.6
Q ss_pred HHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009538 13 FSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLM 92 (532)
Q Consensus 13 ~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 92 (532)
-.+...+.-+.+-+..+|. --+.=+.+..+++++|.++.+++. +.+.=+++-.+.
T Consensus 68 di~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~~------------------------~v~~~l~Gv~la 122 (402)
T PF02487_consen 68 DILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFSP------------------------SVWVRLLGVVLA 122 (402)
T ss_pred HHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeecc------------------------chhHHHHHHHHH
Confidence 3344556666777888885 655556667778888999998874 466778999999
Q ss_pred HHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-cccchhhhHHHHHHHHHHHHHH
Q 009538 93 VIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS-DVSWAWGLGIPAFMMFLSCAMF 171 (532)
Q Consensus 93 G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~-~~gw~~~F~v~~~~~~l~~~~~ 171 (532)
+++.|.-...-.++.. .|++ . ..+.|..+...+.++|+..--.++. .++-|..+.+..++-++..+.+
T Consensus 123 s~ssg~GE~tfL~lt~-~y~~----~------~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~ 191 (402)
T PF02487_consen 123 SLSSGLGEVTFLSLTH-FYGK----S------SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSY 191 (402)
T ss_pred hhhhhhhHHHHHHHHH-hcCc----c------ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888654 4542 1 3677777777777778765444443 2344667776665544444444
Q ss_pred Hhhcc
Q 009538 172 FLGSR 176 (532)
Q Consensus 172 ~~~~~ 176 (532)
+...+
T Consensus 192 f~~L~ 196 (402)
T PF02487_consen 192 FFLLP 196 (402)
T ss_pred HHhhc
Confidence 44443
No 209
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.08 E-value=9.5e-05 Score=77.43 Aligned_cols=114 Identities=12% Similarity=0.021 Sum_probs=89.5
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
+.......++..++.+..+++ .+|+++| +.+..|..+.+++.++.....
T Consensus 41 g~l~s~~~~g~~i~~~~~g~l----~~r~G~r-------~~~~~g~~l~~~g~~l~~~~~-------------------- 89 (410)
T TIGR00885 41 ALVQSAFYGGYFIMAIPAAIF----MKKLSYK-------AGILLGLFLYALGAFLFWPAA-------------------- 89 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHhCch-------HHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 445556666777777765444 7777766 678888888888876654331
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVH 462 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~ 462 (532)
...+.+.++...++.|+|.+...+..+.++.+..|++.|++.+++.+..+.+|..+++.+.+.+.
T Consensus 90 -~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 90 -EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred -hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11356777778889999999999999999999999999999999999999999999999988875
No 210
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.08 E-value=1.5e-05 Score=79.90 Aligned_cols=140 Identities=18% Similarity=0.182 Sum_probs=109.3
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
+.+...-.+.-++..|+++.+ .+|++.| ..+++|++++..+.+++++.+
T Consensus 109 G~LFaskA~~qllvnp~~G~l----~~~iGy~-------ipm~~Gl~vmf~sTilFafg~-------------------- 157 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNL----IDRIGYK-------IPMVAGLFVMFLSTILFAFGN-------------------- 157 (464)
T ss_pred hHHHHHHHHHHHHhcccchhh----HHHhccc-------cHHHHHHHHHHHHHHHHHHcc--------------------
Confidence 344444444555555554443 5555555 689999999999998888762
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchh-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCC
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENM-RSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLP 475 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~-rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~ 475 (532)
+.+.+++.=.++|+|.++..+...++.++.+|++. ||+++|....+-++|-.++|.+.|.+.+..|
T Consensus 158 ----sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G--------- 224 (464)
T KOG3764|consen 158 ----SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG--------- 224 (464)
T ss_pred ----hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC---------
Confidence 56688888899999999999999999999999985 6999999999999999999999999987642
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 476 EDLNKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
+...|.++++++++-.+.-++....
T Consensus 225 -------k~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 225 -------KSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred -------CcCcHHHHHHHHHHHHHHHHheeCc
Confidence 3457888888888877766665543
No 211
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.05 E-value=0.00017 Score=74.79 Aligned_cols=138 Identities=13% Similarity=0.103 Sum_probs=93.3
Q ss_pred hhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccc
Q 009538 319 YAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAIS 398 (532)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (532)
......+...++.++.+++ .||+++| +.+..+.++..++.+.....
T Consensus 48 ~~~~~~~~~~~~~~~~G~l----~Dr~grr-------~~~~~~~~~~~~~~~~~~~~----------------------- 93 (394)
T PRK11652 48 VMAAYLLTYGLSQLFYGPL----SDRVGRR-------PVILVGMSIFILGTLVALFA----------------------- 93 (394)
T ss_pred HHHHHHHHHHHHHHhhhhH----HHhcCCh-------HHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 3344555556666664444 7777665 56666777766666554432
Q ss_pred cchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCC
Q 009538 399 SLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDL 478 (532)
Q Consensus 399 ~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (532)
.+.+.++...++.+++.+...+....+..|..|++.++.+++..++...++..+++.+.+.+.+..
T Consensus 94 -~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------------- 159 (394)
T PRK11652 94 -HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF------------- 159 (394)
T ss_pred -ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------
Confidence 245666677788888887777777788889999999999999999999999999999888876532
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 479 NKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 479 ~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
++...|+..+++.++..+......+|
T Consensus 160 ---g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 160 ---GWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred ---ChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 23456666655555444444444444
No 212
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.05 E-value=2.1e-05 Score=79.78 Aligned_cols=138 Identities=15% Similarity=0.148 Sum_probs=106.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+...+...-.+...++++++|+|.||+ |-|+++.++++++.+..+..-+...
T Consensus 286 s~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~~~~~~~~~~------------------------ 340 (438)
T COG2270 286 SSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIAALYLIFLEG------------------------ 340 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHHHHHHHHccc------------------------
Confidence 344555555566677888999999999995 9999999999999998887776531
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccc-cchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV-SWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~-gw~~~F~v~ 160 (532)
-..+.+.-++.|+..|..++..-+|.++..|+++.. ++|++|....-..+.+||.+.+.+++.. +-|..+..-
T Consensus 341 ~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~------~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i 414 (438)
T COG2270 341 ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEG------RFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSI 414 (438)
T ss_pred cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcccc------ceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 123555667889999999999999999999875543 3699999999999999999999987644 455555554
Q ss_pred HHHHHHHHHH
Q 009538 161 AFMMFLSCAM 170 (532)
Q Consensus 161 ~~~~~l~~~~ 170 (532)
+++..+++++
T Consensus 415 ~vll~iGl~~ 424 (438)
T COG2270 415 IVLLLIGLLL 424 (438)
T ss_pred HHHHHhhHhh
Confidence 4455555444
No 213
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.04 E-value=6.1e-05 Score=80.48 Aligned_cols=133 Identities=12% Similarity=0.088 Sum_probs=92.8
Q ss_pred hhhhhhhHhHHhhhccchhhhccc-cccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 321 IFSMLGLTIWIPIYDRIIVPRLQR-LTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
....+...++.++.+++ .|| +++| +.+.++.++.+++.+..+..
T Consensus 55 ~~~~~~~~~~~~~~G~l----aDr~~G~~-------~~l~~~~~~~~~g~~~~~~~------------------------ 99 (475)
T TIGR00924 55 GAYSALVYLLTSVGWWF----GDRVWGTK-------KTMVLGGIVLMLGHFMLAMS------------------------ 99 (475)
T ss_pred HHHHHHHHHHHhhHHHH----HHhhcchH-------HHHHHHHHHHHHHHHHHHhc------------------------
Confidence 33344444444544443 666 4554 67888888888887766643
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchh---HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENM---RSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPE 476 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~---rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~ 476 (532)
.+.+.+.....+.++|.+...+...+++.+.+|++. |+.+.++.+....+|..+++.+.+.+.+..
T Consensus 100 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~----------- 168 (475)
T TIGR00924 100 IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY----------- 168 (475)
T ss_pred ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 134555667778899999988998999999998754 888999999999999999999999887532
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 009538 477 DLNKGRLDYFYYLVAALGLLNFGFFLLC 504 (532)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~ 504 (532)
++.+.|...++..+++.+.++..
T Consensus 169 -----g~~~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 169 -----GYHVGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred -----ChHHHHHHHHHHHHHHHHHHHHc
Confidence 24566766665555554444433
No 214
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.03 E-value=3e-05 Score=78.62 Aligned_cols=151 Identities=13% Similarity=0.027 Sum_probs=110.2
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCc-
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTP- 79 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~- 79 (532)
+++.+++.....+.+...+.-++||+|+||+ |.+|++++....++++..+..+..+.. ..+++.
T Consensus 251 ~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~~~~~l~~~~~~~--------------~~~~~~~ 315 (417)
T COG2223 251 LSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMALAAALLSLFLTGF--------------GHGGSFV 315 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHHHHHHHHcccccc--------------ccCcchH
Confidence 3567788999999999999999999999996 999999999999999988888764211 001111
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhhhH
Q 009538 80 WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWGLG 158 (532)
Q Consensus 80 ~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F~ 158 (532)
..+..++...+..|+|.|. +...+..+|+. +.+...++.....++|.+.-|...+...+..| +...|+
T Consensus 316 ~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~~-------~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~ 384 (417)
T COG2223 316 VFVAVFLALFVFAGLGNGS----VFKMIPVIFPK-------ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFM 384 (417)
T ss_pred HHHHHHHHHHHHhccCcch----heeechHHHHh-------hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHH
Confidence 2345566677777777776 44555555542 22346777777888888888888888777666 889999
Q ss_pred HHHHHHHHHHHHHHhhcce
Q 009538 159 IPAFMMFLSCAMFFLGSRL 177 (532)
Q Consensus 159 v~~~~~~l~~~~~~~~~~~ 177 (532)
+-....+++++..+..+.+
T Consensus 385 ~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 385 LLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 8888777777765555444
No 215
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.02 E-value=2.9e-05 Score=92.12 Aligned_cols=151 Identities=15% Similarity=-0.004 Sum_probs=104.1
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+++.+.+.+++.++.++.|+++|++ ++++.+..+.++.+++.+.+++... ....+....-.-..++ ...+
T Consensus 259 ~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~---~~~~ 333 (1140)
T PRK06814 259 DENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFGLDLAFASS-SVPAEPAQLKSILVFL---SKRH 333 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHHHHHHhccc-ccccccccccchhhhh---cccc
Confidence 456789999999999999999999999986 8877777776666666655554200 0000000000000000 0024
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc-ccccchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ-SDVSWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~-~~~gw~~~F~v~ 160 (532)
.+.++++-++.|++.+...+...+++.+.+|++ .++++++.+.....+|..+|+++.+.+. ...++...|++.
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~ 407 (1140)
T PRK06814 334 GWRILIDLFGLAAAGGLYIVPLFAALQAWANPA------HRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFI 407 (1140)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc------cceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 566788899999999999998999999987753 2345899999999999999999988886 456777776655
Q ss_pred HHH
Q 009538 161 AFM 163 (532)
Q Consensus 161 ~~~ 163 (532)
+..
T Consensus 408 ~~~ 410 (1140)
T PRK06814 408 ALA 410 (1140)
T ss_pred HHH
Confidence 443
No 216
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.00 E-value=0.00016 Score=76.52 Aligned_cols=174 Identities=12% Similarity=0.039 Sum_probs=103.3
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHH-HHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccC-
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRM-AIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRR- 394 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 394 (532)
........+..++..|+.+.++++...|++|| +.+ ..|.....+++.+++......... .++.
T Consensus 42 ~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR-------rp~il~g~~~~~~~l~ll~~~~~~~~~~--------~~~~~ 106 (477)
T TIGR01301 42 SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR-------RPFIAAGAALVAFAVILIGFAADIGHLF--------GDNLD 106 (477)
T ss_pred HHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh-------HHHHHHHHHHHHHHHHHHHhCchhhhhc--------ccccc
Confidence 34455667777777888888755444456655 333 445666666666655432110000 0000
Q ss_pred CccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhH--HHHHHHHHHHHHHHHHHHHHHHHHhc--cccc--CC
Q 009538 395 GAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMR--SIGGSLAFVGFAISNYLNGFLISMVH--RFTK--GA 468 (532)
Q Consensus 395 ~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~r--g~~~gl~~~~~~ig~~l~~~~~~~~~--~~~~--~~ 468 (532)
+.......+..+..+.+..++.....++..+++.|.+|++.| +.+.++......+|+.++..+.+... +..+ ..
T Consensus 107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~ 186 (477)
T TIGR01301 107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKT 186 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccc
Confidence 001112224445555566677777778889999999998865 57899999999999999998877641 1110 00
Q ss_pred CCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009538 469 STGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKY 510 (532)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~ 510 (532)
...+.++ .++...|++.+++.+++.+...+..+|.+.
T Consensus 187 ~~~~~~~-----~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 187 EACGVSC-----ANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred ccccccc-----chHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 0001111 246677877777777777777777777554
No 217
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.99 E-value=8.5e-05 Score=77.34 Aligned_cols=136 Identities=15% Similarity=0.008 Sum_probs=98.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+.+.++..++++..+++.||+ ++|+++..+.. .++..++.++.+ +
T Consensus 239 s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~------------------------~ 292 (393)
T PRK11195 239 TLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH------------------------S 292 (393)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh------------------------H
Confidence 567788999999999999999999999996 99998887753 334333344432 4
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPA 161 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~ 161 (532)
.+...+.-++.|++.+...+...+.+.+. +|++ ..+++..+..+...++|..++..+.+.+ ...|=+..+.+..
T Consensus 293 ~~~~~~~~~~~G~~~g~~~~~~~~~~q~~-~~~~----~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 366 (393)
T PRK11195 293 LLPAYPLLILIGALGGFFVVPMNALLQHR-GHVL----VGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVG 366 (393)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHhh-Cccc----ccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHH
Confidence 55566777889999999888788877774 3321 1245688899999999999999988866 3466666666655
Q ss_pred HHHHHHHH
Q 009538 162 FMMFLSCA 169 (532)
Q Consensus 162 ~~~~l~~~ 169 (532)
...++.+.
T Consensus 367 ~~~~~~~~ 374 (393)
T PRK11195 367 FGLLVALA 374 (393)
T ss_pred HHHHHHHH
Confidence 54444433
No 218
>PRK11043 putative transporter; Provisional
Probab=97.98 E-value=0.00012 Score=76.10 Aligned_cols=127 Identities=11% Similarity=-0.027 Sum_probs=88.8
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+...+..+..++.+.++++.||+ |+|+.+....+..+++.+.+........ .+
T Consensus 236 s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~ 295 (401)
T PRK11043 236 SPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLLSH-------------------PS 295 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------Cc
Confidence 455667777777788888999999999995 9999887776666666554333221110 13
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchh
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAW 155 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~ 155 (532)
...++++-.+.|++.+...|.......|..|+ .+++..+++......+..+++.+.+.+.++.....
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-------ATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-------cChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 44556667788999999999888877776542 22457888888878888888888888766444343
No 219
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.91 E-value=0.00032 Score=75.49 Aligned_cols=112 Identities=7% Similarity=0.086 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchh
Q 009538 356 QRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENM 435 (532)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~ 435 (532)
+.+..|.++.+++...+.... .+.+.+....++.++|.++..+...+++.+.+|++.
T Consensus 89 ~~~~~g~~~~~ig~~l~~~~~-----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~ 145 (500)
T PRK09584 89 RVIMLGAIVLAIGYALVAWSG-----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD 145 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc
Confidence 677788888777766655431 123445556678889999888888899999998653
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 009538 436 --RSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAK 506 (532)
Q Consensus 436 --rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~ 506 (532)
|+.+.+++++...+|..+++.+.+++.+.. ++.+.|.+.++..+++.+.+++..+
T Consensus 146 ~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~----------------g~~~~F~i~~i~~~i~~i~~~~~~~ 202 (500)
T PRK09584 146 PRLDGAFTMYYMSINIGSFFSMLATPWLAAKY----------------GWSVAFALSVVGMLITVVNFAFCQR 202 (500)
T ss_pred hhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh----------------CHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 455788888999999999999999987632 2456777666555555554444433
No 220
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.91 E-value=0.00021 Score=76.65 Aligned_cols=93 Identities=14% Similarity=0.187 Sum_probs=72.6
Q ss_pred ccc-cccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhh
Q 009538 342 LQR-LTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTI 420 (532)
Q Consensus 342 ~~~-~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~ 420 (532)
.|| +++| +.+.+|.++..++.+.+++.. .....+....+++++|.++..
T Consensus 74 aDr~~G~r-------~~~~~g~~~~~~g~~~~~~~~-----------------------~~~~ll~~~~~l~~ig~g~~~ 123 (489)
T PRK10207 74 GDHLLGTK-------RTIVLGAIVLAIGYFMTGMSL-----------------------LKPDLIFIALGTIAVGNGLFK 123 (489)
T ss_pred hhhccchH-------HHHHHHHHHHHHHHHHHHHhc-----------------------cchhHHHHHHHHHHhcccccc
Confidence 666 5555 788889998888877776541 112223356778899999999
Q ss_pred hhhhhhhhcccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 421 IAEVEFYYKQFPEN--MRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 421 ~~~~~~~~~~~P~~--~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
+...+++.|.+|++ .|+.+.+++.+...+|..+++.+.+++.+.
T Consensus 124 ~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~ 169 (489)
T PRK10207 124 ANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK 169 (489)
T ss_pred CCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999887 457789999999999999999999998753
No 221
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.90 E-value=0.00023 Score=75.81 Aligned_cols=117 Identities=13% Similarity=0.115 Sum_probs=78.3
Q ss_pred cccc-ccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhh
Q 009538 342 LQRL-TKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTI 420 (532)
Q Consensus 342 ~~~~-~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~ 420 (532)
.||+ ++| +.+.+|.++..++.+..+... .+.......+.+..+|.+...
T Consensus 69 aDRilGrr-------r~iliG~il~~lg~lll~~~~-----------------------~~~~~~~l~l~li~iG~G~~~ 118 (493)
T PRK15462 69 ADKVLGNR-------MAVMLGALLMAIGHVVLGASE-----------------------IHPSFLYLSLAIIVCGYGLFK 118 (493)
T ss_pred HHHccCcH-------HHHHHHHHHHHHHHHHHHHhh-----------------------cchhHHHHHHHHHHHhccccc
Confidence 6665 444 567788888777765444211 111223334445556777766
Q ss_pred hhhhhhhhcccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 009538 421 IAEVEFYYKQFPEN--MRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNF 498 (532)
Q Consensus 421 ~~~~~~~~~~~P~~--~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 498 (532)
+...+++.|.+|++ .|+++.++.+....+|+.+++.+.+++.+.. ++.+.|...++.++++.
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~----------------Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY----------------SWAMGFGLAAVGMIAGL 182 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----------------ChHHHHHHHHHHHHHHH
Confidence 77788999999976 7999999999999999999999999986532 24566766555555555
Q ss_pred HHHHHh
Q 009538 499 GFFLLC 504 (532)
Q Consensus 499 ~~~~~~ 504 (532)
+.+++.
T Consensus 183 i~~~~~ 188 (493)
T PRK15462 183 VIFLCG 188 (493)
T ss_pred HHHHHh
Confidence 554443
No 222
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.88 E-value=0.00033 Score=71.58 Aligned_cols=99 Identities=20% Similarity=0.134 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.+.+....++.+++.....++..+++.|.+|++.|+.++++......+|..+++.+.+.+.+..+. ++.+.
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~--------~~~~~ 153 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFA--------NTGLI 153 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccc--------ccccc
Confidence 4555556666777888888889999999999999999999999999999999999998887654321 00111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
..+...|++.+++.++..+..+...+|
T Consensus 154 ~~wr~~f~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 154 TLWGYIFFWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccC
Confidence 123456666665555544443333343
No 223
>PRK11462 putative transporter; Provisional
Probab=97.88 E-value=9.1e-05 Score=78.82 Aligned_cols=125 Identities=10% Similarity=0.062 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 6 ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 6 ~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
.+++...+.++..++.+++++++||+ |||+++..+..+.++..++..+.+. .+...+
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 321 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFVPM----------------------QASITM 321 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhch----------------------hHHHHH
Confidence 35566677788888999999999995 9999987666555554444333221 122234
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCC-CcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccc
Q 009538 86 FTGLGLMVIGAGGIRPCNLAFGADQFNPNTE-SGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSW 153 (532)
Q Consensus 86 ~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~-~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw 153 (532)
++.-++.|++.+...+...++++|....+|- .++|.-+..++.+.+...+|..+|+.++|++....|+
T Consensus 322 ~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 322 FVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4555667888887777777888886542221 2222334557888889999999999998887655455
No 224
>PTZ00207 hypothetical protein; Provisional
Probab=97.84 E-value=0.00042 Score=75.19 Aligned_cols=123 Identities=9% Similarity=0.065 Sum_probs=86.5
Q ss_pred hccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhh
Q 009538 341 RLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTI 420 (532)
Q Consensus 341 ~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~ 420 (532)
+.+|+++| +.+.+|.++.+++.++.++... .....+.+.+.+..++.|+|.+...
T Consensus 84 L~Dr~G~R-------~vllig~ll~~iG~ll~ala~~------------------~~i~~s~~~l~l~r~l~G~G~~~~~ 138 (591)
T PTZ00207 84 IYDYLGPR-------PIFVLSMTVFCLGTLLFALTFQ------------------EVIEGSVVRLSVYNGLMTLGCMLFD 138 (591)
T ss_pred HHHHhCcH-------HHHHHHHHHHHHHHHHHHHHhc------------------ccccCcHHHHHHHHHHHHHHHHHHH
Confidence 36666555 6888899998888887776421 0011367777778889999999888
Q ss_pred hhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 009538 421 IAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGF 500 (532)
Q Consensus 421 ~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~ 500 (532)
+.....+.+.+| +.||.+.|+......+|+.+.+.+...+... +....+++++++.++..+.
T Consensus 139 ~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----------------~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 139 LGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----------------NTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------hHHHHHHHHHHHHHHHHHH
Confidence 888888999998 5689999999999999998755555544321 1345666667666666555
Q ss_pred HHHhhh
Q 009538 501 FLLCAK 506 (532)
Q Consensus 501 ~~~~~~ 506 (532)
.+.+.+
T Consensus 201 ~~~~vr 206 (591)
T PTZ00207 201 AIVFMR 206 (591)
T ss_pred HHhhee
Confidence 555443
No 225
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.84 E-value=4.3e-05 Score=81.79 Aligned_cols=144 Identities=11% Similarity=0.119 Sum_probs=119.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhcccc--chHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCC
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFG--RYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPT 78 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~G--rr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~ 78 (532)
+++.+++.+.++....-.++-+..|+++|+. . ++.++.+++++.+++...+.++.
T Consensus 330 ~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~gl~~~~~p~~~---------------------- 386 (509)
T KOG2504|consen 330 LSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIAGLARLFLPFAT---------------------- 386 (509)
T ss_pred CChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHHHHHHHHHHHhc----------------------
Confidence 3678889999999999999999999999996 7 56666677777777777777774
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chhhh
Q 009538 79 PWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAWGL 157 (532)
Q Consensus 79 ~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~~F 157 (532)
++..++..-++.|+..|.........+.|....++ ...++++......++.++||.+.|++.+..+ |...|
T Consensus 387 --~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f 458 (509)
T KOG2504|consen 387 --TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAF 458 (509)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeeh
Confidence 57789999999999999999988889999876533 3446999999999999999999999988777 99999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 009538 158 GIPAFMMFLSCAMFFLGS 175 (532)
Q Consensus 158 ~v~~~~~~l~~~~~~~~~ 175 (532)
+..++.++++...++...
T Consensus 459 ~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 459 YFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhcChHHHHHHHHHHHhH
Confidence 998888777766555443
No 226
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.83 E-value=0.00091 Score=69.92 Aligned_cols=82 Identities=9% Similarity=0.070 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchh
Q 009538 356 QRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENM 435 (532)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~ 435 (532)
+.+..+++..++..++.++. .+.+.+.+.-++.|++|+... +.+.++++-+|++.
T Consensus 93 ~vL~l~~l~Wsl~t~L~~fa------------------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE 147 (511)
T TIGR00806 93 PVLVLQALSFVCVWLLLLLG------------------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR 147 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH
Confidence 67778888888877777765 367788888999999999999 88999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009538 436 RSIGGSLAFVGFAISNYLNGFLISMVH 462 (532)
Q Consensus 436 rg~~~gl~~~~~~ig~~l~~~~~~~~~ 462 (532)
|++++|+.+....+|.++++.+.+++.
T Consensus 148 R~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 148 YQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999844
No 227
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00018 Score=76.37 Aligned_cols=100 Identities=12% Similarity=0.089 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNK 480 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (532)
+.+.+++..++.|+.|+..+|+...+...-+.++.||.-+|+++..+.+|+.+++.+...+....+.....
T Consensus 133 s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~--------- 203 (495)
T KOG2533|consen 133 SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA--------- 203 (495)
T ss_pred hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC---------
Confidence 67788888999999999999999999999999999999999999999999999999988865433222222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009538 481 GRLDYFYYLVAALGLLNFGFFLLCAKWYKY 510 (532)
Q Consensus 481 ~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~ 510 (532)
++.|.|++-+++.++..++.+++.|....
T Consensus 204 -gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 204 -GWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred -CceeehhHHHHHHHHHHheEEEEecCChh
Confidence 34778888888888887776666665443
No 228
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.78 E-value=0.00018 Score=79.42 Aligned_cols=64 Identities=8% Similarity=-0.071 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
.+..+++.-++.|+|++...+...+++.|.+|++.|+.+.|+.+....+|..+++.+.+.+.+.
T Consensus 171 ~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 171 MWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred eehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 3556667889999999999999999999999999999999999999999999999999988753
No 229
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.00014 Score=69.80 Aligned_cols=131 Identities=11% Similarity=0.077 Sum_probs=93.3
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHH-HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCc
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGF-ASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTP 79 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~-~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 79 (532)
+|+..++.+.+......++..++.|.++|++ ||+-.... +++...+++.+..|+.-
T Consensus 297 lS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~~tl~~H~~l~Ft~l---------------------- 353 (459)
T KOG4686|consen 297 LSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACILTLLGHSGLFFTFL---------------------- 353 (459)
T ss_pred CChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHHHHHHHhhhHHhhhc----------------------
Confidence 4677888999999999999999999999997 99876655 45556667888888741
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc---chhh
Q 009538 80 WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS---WAWG 156 (532)
Q Consensus 80 ~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g---w~~~ 156 (532)
.=+++-.+.|+...+.-...-..++...|+ ++++++++..+...|+|-++-|++.|++.++-| |--.
T Consensus 354 ----sPy~~m~~lGLsysllAcslWP~va~~vpE------~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ 423 (459)
T KOG4686|consen 354 ----SPYTSMTFLGLSYSLLACSLWPCVASLVPE------EQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEA 423 (459)
T ss_pred ----cHHHHHHHHhhhHHHHHHHHhhhhhhhCCH------HHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHH
Confidence 123444555666544333333344444442 566789999999999999999999999987654 4445
Q ss_pred hHHHHHHH
Q 009538 157 LGIPAFMM 164 (532)
Q Consensus 157 F~v~~~~~ 164 (532)
|.+....+
T Consensus 424 ffl~~~~~ 431 (459)
T KOG4686|consen 424 FFLIIGLM 431 (459)
T ss_pred HHHHHHHH
Confidence 66554433
No 230
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.00043 Score=73.31 Aligned_cols=124 Identities=14% Similarity=0.184 Sum_probs=100.9
Q ss_pred hhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHh
Q 009538 339 VPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAF 418 (532)
Q Consensus 339 ~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~ 418 (532)
..+.+|++.| +.+..+.++.+++.++..+... .+.+.+++.=+++|++++.
T Consensus 94 g~l~~k~G~r-------~v~~~~~~~sa~~t~l~P~aa~----------------------~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 94 GYLADKFGAR-------RVFFISGLISALLTLLTPLAAS----------------------IGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred HHHHHHcCch-------HHHHHHHHHHHHHHHHHHHHHH----------------------hcchhhHHHHHHhHHHHhH
Confidence 3447777766 6788888888888877777642 4555667788999999999
Q ss_pred hhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 009538 419 TIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNF 498 (532)
Q Consensus 419 ~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 498 (532)
..|+...+..+-+|++.|++..++......+|.+++-.+.|.+-+.. .+| ...|++.++++++..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~-----~GW----------~sifY~~g~~g~i~~ 209 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS-----LGW----------PSIFYVFGIVGLIWF 209 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC-----CCC----------chHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887641 134 678899999988887
Q ss_pred HHHHHhhh
Q 009538 499 GFFLLCAK 506 (532)
Q Consensus 499 ~~~~~~~~ 506 (532)
+..+.+..
T Consensus 210 ~~w~~~~~ 217 (466)
T KOG2532|consen 210 ILWFLFYS 217 (466)
T ss_pred HHHHHHhc
Confidence 76666654
No 231
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.62 E-value=0.001 Score=64.24 Aligned_cols=145 Identities=17% Similarity=0.136 Sum_probs=97.5
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCc-
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTP- 79 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~- 79 (532)
+|.+|.+.+...-.+|.+++ ++.|.+.|++ |.+.++++|.+...+|..++..+-+ ++.+
T Consensus 34 ~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~------------------~~i~~ 93 (250)
T PF06813_consen 34 YSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVS------------------GRIPS 93 (250)
T ss_pred CCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh------------------CccCc
Confidence 46788888999999998874 8889999996 9999999999999999998777642 1111
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHH
Q 009538 80 WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 159 (532)
Q Consensus 80 ~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v 159 (532)
.+++.+.+..++.|.|...+...+.....+.||. .|+++.++.-....+++++-..+...+-++..-...+.+
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-------~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~l 166 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-------SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFL 166 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-------ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHH
Confidence 3567788888888888777666666666677873 224567766666666666555554444333333444444
Q ss_pred HHHHHHHHHHHHH
Q 009538 160 PAFMMFLSCAMFF 172 (532)
Q Consensus 160 ~~~~~~l~~~~~~ 172 (532)
.....++.++..+
T Consensus 167 a~~~~~v~l~~~~ 179 (250)
T PF06813_consen 167 AVLPAVVCLVAMF 179 (250)
T ss_pred HHHHHHHHHHHhh
Confidence 4433444433333
No 232
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.0015 Score=68.28 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 6 ATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 6 ~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
.......+..+..++.++..+|++|+ |||+++.++.++..++.++.-+.+ ..+...+
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~~~~~f~~----------------------~~~~~l~ 330 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGYLLLYFTP----------------------AGSVVLI 330 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHHHHHHhhc----------------------CcchHHH
Confidence 34455556666667799999999995 999999999999999999999975 1368889
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCC-CcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc
Q 009538 86 FTGLGLMVIGAGGIRPCNLAFGADQFNPNTE-SGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS 152 (532)
Q Consensus 86 ~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~-~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g 152 (532)
++..++.++|.+...+..-++++|.....|- .++|.=+..++.+.++.=+|.+++..+.|++....|
T Consensus 331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 331 VVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998653322 222233567788888888999998888777654443
No 233
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.0012 Score=69.57 Aligned_cols=154 Identities=13% Similarity=0.025 Sum_probs=101.0
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..++.+....-.....+..+.+.++.||+ |||+.++++.....+..+++..+..+..... ++..
T Consensus 303 ~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~--------------~~~~ 367 (485)
T KOG0569|consen 303 TPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAVALLLMSIALFLSNSFG--------------SWLS 367 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------------hHHH
Confidence 466778888888888899999999999996 9999999999999999988887654432000 0001
Q ss_pred HHHHHHHHHHHHHhccc-cccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHH
Q 009538 82 LAFLFTGLGLMVIGAGG-IRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP 160 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~-~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~ 160 (532)
+ ..+++.++-.++.+. .-|...-+.+|.||+.. |..++++-.....+..++-......+.+.+|= +.|.+.
T Consensus 368 y-~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF 439 (485)
T KOG0569|consen 368 Y-LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILF 439 (485)
T ss_pred H-HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHH
Confidence 1 122333333332222 25777788899988633 23467766666666666666666777666664 666666
Q ss_pred HHHHHHHHHHHHhhccee
Q 009538 161 AFMMFLSCAMFFLGSRLY 178 (532)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~ 178 (532)
.+...+..+..+...|+.
T Consensus 440 ~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 440 VIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHhCccc
Confidence 666555555555555553
No 234
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.61 E-value=0.00085 Score=63.95 Aligned_cols=127 Identities=15% Similarity=0.094 Sum_probs=73.4
Q ss_pred HHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 009538 17 TNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGA 96 (532)
Q Consensus 17 ~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 96 (532)
..+...+.|-|+|+- |||+ +++.+++..++++++-- .+++-+++++|.+-|+..
T Consensus 85 smLFGtivgSLaDkq-GRKr----acvtycitYiLsCiTKh---------------------SpqYkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQ-GRKR----ACVTYCITYILSCITKH---------------------SPQYKVLMVGRVLGGIAT 138 (454)
T ss_pred HHHHHHHHHHHHhhh-cccc----ceeeehHHHHHHHHhhc---------------------CCceEEEeehhhhhhHHH
Confidence 445666778899995 9999 56788888999888642 135778999999999999
Q ss_pred cccccccccc-cccCCCCCCCCcccchhhhhhh-hHHHHhHHHHHHHHhhhhcccc--ccchhhhHHHHHHHHHHHHH
Q 009538 97 GGIRPCNLAF-GADQFNPNTESGKQGITSFFNW-YYFTFTFAMMISLTVIVYVQSD--VSWAWGLGIPAFMMFLSCAM 170 (532)
Q Consensus 97 g~~~p~~~~~-i~d~f~~~~~~~~~~~~~~~~~-~~~~~~~G~~~g~~~~g~i~~~--~gw~~~F~v~~~~~~l~~~~ 170 (532)
.....+-.+. ++|.-..++-+ .+.+..-++- ..+...+-++++.+.+-.+.++ +|--.+|-..+++..++..+
T Consensus 139 sLLFSaFEsWliaEHnekr~Fe-qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAv 215 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEHNEKRGFE-QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAV 215 (454)
T ss_pred HHHHHHHHHHHHHHhhhccCCh-HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHH
Confidence 8887765554 44432111110 0111000110 0112222223333444445443 35557787777665555444
No 235
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.58 E-value=0.012 Score=60.62 Aligned_cols=123 Identities=10% Similarity=-0.032 Sum_probs=86.5
Q ss_pred HHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 009538 16 TTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIG 95 (532)
Q Consensus 16 ~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 95 (532)
.+....++...++|. +|-|++++++.+...+..+++-+.. ++..+-+.-++-|++
T Consensus 53 Syl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~------------------------sv~~mq~~q~~yg~~ 107 (412)
T PF01770_consen 53 SYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT------------------------SVLAMQLMQFFYGLA 107 (412)
T ss_pred HHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC------------------------cHHHHHHHHHHHHHH
Confidence 345688889999999 5999999999999999999988885 466788888888887
Q ss_pred ccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc--cccchhhhHHHHHHHHHHHHH
Q 009538 96 AGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS--DVSWAWGLGIPAFMMFLSCAM 170 (532)
Q Consensus 96 ~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~--~~gw~~~F~v~~~~~~l~~~~ 170 (532)
.+. ..+.++|+=...+ +++ -.++.+....+.-+|-.+|.++|-.+.. ..+++..+++......++++.
T Consensus 108 ~a~-evay~sYiys~v~---~~~---yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~ 177 (412)
T PF01770_consen 108 TAA-EVAYYSYIYSVVD---KEH---YQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLI 177 (412)
T ss_pred HHH-HHHHHHHheeecC---HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 776 3334444444333 222 2345667777788888888777766654 456667777777655555544
No 236
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.58 E-value=0.00036 Score=72.00 Aligned_cols=137 Identities=9% Similarity=0.072 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHH
Q 009538 7 TTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLF 86 (532)
Q Consensus 7 ~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 86 (532)
|.+.+.=.+.=.++-.+..++-+|+ |.|+.++++..++++=.+++++++ +.+.+.
T Consensus 262 G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i~~iRi~~~~~~~------------------------~~~~i~ 316 (412)
T PF01306_consen 262 GYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVIMAIRIIGSGFAT------------------------NPWVIS 316 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT--------------------------SHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHHHHHHHHHHhhhc------------------------chHHHH
Confidence 4444444444556777889999995 999999999999999999999986 567899
Q ss_pred HHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhh-hHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHH
Q 009538 87 TGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNW-YYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMF 165 (532)
Q Consensus 87 ~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~-~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~ 165 (532)
+.+.+.|+-.++.......|+++.|++ +..++.+.+ ++.+..+|..+.+.++|++-++.|.+-.|++.+..++
T Consensus 317 ~~klLH~~e~~l~lva~fkYI~~~fd~------rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~ 390 (412)
T PF01306_consen 317 LIKLLHALEFPLLLVAAFKYITAHFDK------RLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVL 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-G------GGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCH------hHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHH
Confidence 999999999999999999999999874 222345554 4678889999999999999999999999988776655
Q ss_pred HHHHHHHhh
Q 009538 166 LSCAMFFLG 174 (532)
Q Consensus 166 l~~~~~~~~ 174 (532)
...++-...
T Consensus 391 ~~~li~~f~ 399 (412)
T PF01306_consen 391 PFTLISAFT 399 (412)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHheee
Confidence 544443333
No 237
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.52 E-value=0.00071 Score=67.52 Aligned_cols=139 Identities=15% Similarity=0.112 Sum_probs=104.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
+|..+++++++...+.....++..-.+++|.--+|+........+.+|...+.+.+.
T Consensus 240 ~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~----------------------- 296 (395)
T COG2807 240 LSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG----------------------- 296 (395)
T ss_pred CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh-----------------------
Confidence 478899999999999999999999999997657788888889999999998888752
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccc-ccchhhhHH
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSD-VSWAWGLGI 159 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~-~gw~~~F~v 159 (532)
+ ..+..-+++|+|.|...|....++.+..+. +++. +..-++-+-...+=+..||.+.|++.|. .+|+.++..
T Consensus 297 ~--~~~lw~~llG~G~G~~F~laL~li~~rs~~--a~~A---a~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~ 369 (395)
T COG2807 297 Q--LPILWALLLGLGQGGAFPLALTLILLRSSD--AAIA---AALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVL 369 (395)
T ss_pred h--HHHHHHHHHhCccchHHHHHHHHHHhhcCC--hHHH---HHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHH
Confidence 1 233335899999999999999999998643 2222 3344455555566677789999998764 468877766
Q ss_pred HHHHHHHHHH
Q 009538 160 PAFMMFLSCA 169 (532)
Q Consensus 160 ~~~~~~l~~~ 169 (532)
-+...++..+
T Consensus 370 l~~~~i~m~i 379 (395)
T COG2807 370 LALATLLMLI 379 (395)
T ss_pred HHHHHHHHHH
Confidence 5544443333
No 238
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.50 E-value=0.001 Score=69.33 Aligned_cols=130 Identities=14% Similarity=0.062 Sum_probs=94.9
Q ss_pred HHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 009538 18 NFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAG 97 (532)
Q Consensus 18 ~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g 97 (532)
...-.+.+++..|+ |.|+++.++++.+++=..+.+..++.+ +..+...+++..++|+.-|
T Consensus 257 i~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~a~~~~~~-------------------~~~~~~~~l~q~lhG~tf~ 316 (400)
T PF03825_consen 257 IPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLYAYFSDPW-------------------PFIVALQLLGQLLHGLTFG 316 (400)
T ss_pred HHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhcCCc-------------------HHHHHHHHHHHhhhhHHHH
Confidence 35667889999995 999999999999999988888873100 0123345566778999999
Q ss_pred ccccccccccccCCCCCCCCcccchhhhhhhhHHH-HhHHHHHHHHhhhhccccccch------hhhHHHHHHHHHHHHH
Q 009538 98 GIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFT-FTFAMMISLTVIVYVQSDVSWA------WGLGIPAFMMFLSCAM 170 (532)
Q Consensus 98 ~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~-~~~G~~~g~~~~g~i~~~~gw~------~~F~v~~~~~~l~~~~ 170 (532)
.+.++...|+.+..|++ .+++..+++... ..+|..+|..++|++-+++|-+ ..|.+.+.+.++..+.
T Consensus 317 ~~~~a~~~yi~~~~p~~------~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~ 390 (400)
T PF03825_consen 317 LFHAASVRYIDRIAPPE------LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVL 390 (400)
T ss_pred HHHHHHHHHHHHhCCcc------chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999998752 234567776654 5699999999999998877644 4445555544444444
Q ss_pred HHh
Q 009538 171 FFL 173 (532)
Q Consensus 171 ~~~ 173 (532)
++.
T Consensus 391 f~~ 393 (400)
T PF03825_consen 391 FVI 393 (400)
T ss_pred HHh
Confidence 433
No 239
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.43 E-value=0.0035 Score=65.82 Aligned_cols=163 Identities=13% Similarity=0.048 Sum_probs=106.0
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
+.......++-.++.|+++.+ -.|.. +..+.+..|.+++.++.++++..++
T Consensus 74 G~viaa~slg~~i~~liF~~W----s~k~~------~~k~Pli~s~ii~~~g~llY~~l~~------------------- 124 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIW----SNKTG------SVKKPLIVSFLIAIIGNLLYLALAY------------------- 124 (488)
T ss_pred hHHHHHHHHHHHhcchhhccc----ccccC------CcccCHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 344445667777777776665 22221 1135688999999999999876654
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPE 476 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~ 476 (532)
..+-..+.+++..++.|+|.+.... .-.|+++..-.+.|.++++.....+.+|..+||.+.+.+...... ...+++.
T Consensus 125 ~~~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~--G~~i~~~ 201 (488)
T KOG2325|consen 125 VPNGVKYLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK--GFMILPG 201 (488)
T ss_pred cccchHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC--ceEEcCc
Confidence 1122678888899999998665443 356777765566677777777777777777777766665433211 1123332
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009538 477 DLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKG 512 (532)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~ 512 (532)
+.-+.|...=|+.+++.++.+++..++.+|.....
T Consensus 202 -~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 202 -LIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred -ceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 33445666667788888888888888877765443
No 240
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.36 E-value=0.0011 Score=66.29 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=73.7
Q ss_pred HHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 009538 18 NFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAG 97 (532)
Q Consensus 18 ~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g 97 (532)
.-+.++.+++.|| +|||+++....+++++..++....-+ + ..-...++.+|++...
T Consensus 395 fPGlLIt~~iver-lGRKkTMal~l~~f~iflfll~~c~~-------------------r-n~~tvllf~arafisg--- 450 (528)
T KOG0253|consen 395 FPGLLITGVIVER-LGRKKTMALSLILFGIFLFLLTTCKT-------------------R-NAYTVLLFTARAFISG--- 450 (528)
T ss_pred CCchhHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHhcC-------------------c-chhHHHHHHHHHHHhc---
Confidence 3488999999999 59999999999999999888777532 1 1235678889987743
Q ss_pred ccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhh
Q 009538 98 GIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVI 144 (532)
Q Consensus 98 ~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~ 144 (532)
...+++.|--|.||. ..|++..+.-..+.-+|+++.|.+.
T Consensus 451 -~fqvaYvYtPEVyPT------avRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 451 -AFQVAYVYTPEVYPT------AVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred -hheEEEEecCcccch------hhhhcchhhhhhHHhhhhhhhhHHH
Confidence 344588888999874 2335567777778899999999887
No 241
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.35 E-value=0.00065 Score=72.44 Aligned_cols=130 Identities=11% Similarity=-0.096 Sum_probs=98.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 2 KSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 2 ~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
++.+.+.+.+...++..++....+++.+|+ +.|+++.++.++.+++.+......+-..+. . | ..+
T Consensus 286 s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~---~---------g--i~~ 350 (468)
T TIGR00788 286 GPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA---F---------G--ISD 350 (468)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc---c---------C--CCC
Confidence 577788888889999999999999999995 999999999999999886654221000000 0 0 012
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS 152 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g 152 (532)
...++..-++.+++.+........++.+..|++. .++.++++....++|..+++.+++++.++.|
T Consensus 351 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 351 EVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred eeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2345566788888888888888999999876532 2457999999999999999999999988777
No 242
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.30 E-value=0.00082 Score=67.39 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=84.3
Q ss_pred hhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCC
Q 009538 316 AASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRG 395 (532)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (532)
.+.+.....+.-.+..|+++++ .|+++|| ..+.++.+..++.....+..
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~----SD~yGRk-------pvll~c~~~va~s~ll~~~S-------------------- 118 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCL----SDRYGRK-------PVLLACLIGVALSYLLWALS-------------------- 118 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhh----hhhhCch-------HHHHHHHHHHHHHHHHHHHH--------------------
Confidence 4555566666667777776665 7888777 56777777776665555543
Q ss_pred ccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 396 AISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 396 ~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
-+...++..=++.|+..+..... .++++|.++++.|+.+++.......+|..+||.+.+.+..
T Consensus 119 ----~~F~afv~aR~l~Gi~kgnl~v~-rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 ----RNFAAFVLARFLGGIFKGNLSVI-RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ----HHHHHHHHHHHhhhhccCchHHH-HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 23434444467888888777655 7899999999999999999999999999999999998764
No 243
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.28 E-value=0.011 Score=64.05 Aligned_cols=136 Identities=14% Similarity=0.293 Sum_probs=88.9
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
++...+.+...+..|+++++ .|.++|| ..++.|.++..++.++.+-.
T Consensus 82 w~~~~~~l~~av~~~~~G~L----SDlfGRr-------~~~i~g~~l~vvG~Iv~atA---------------------- 128 (599)
T PF06609_consen 82 WFSTAWTLASAVSFPFVGRL----SDLFGRR-------YFFIIGSLLGVVGSIVCATA---------------------- 128 (599)
T ss_pred HHHHHHHHHHHHHHHhhHHH----HHHhcch-------HHHHHHHHHHHhHHHHhhcC----------------------
Confidence 44455666666667776555 7777766 67788888888888777644
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
.+...++....+.|+|.+.... ....++|..|.+.|..+.++.....-+....++.+...+... .+ |
T Consensus 129 --~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~----~~--W---- 195 (599)
T PF06609_consen 129 --QNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH----SG--W---- 195 (599)
T ss_pred --CcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC----CC--c----
Confidence 3566777788888888666554 355689999999998888776655544444555555444321 12 2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCA 505 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~ 505 (532)
-|.|++..++..++++..++++
T Consensus 196 ------Rw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 196 ------RWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHh
Confidence 3455666666666665544444
No 244
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.16 E-value=0.0063 Score=62.10 Aligned_cols=145 Identities=15% Similarity=0.196 Sum_probs=117.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCch
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPW 80 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (532)
++..+.+.+...+..+..++-...|++..|..++|++-.+++....++..+..++....
T Consensus 241 msv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~--------------------- 299 (403)
T PF03209_consen 241 MSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG--------------------- 299 (403)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc---------------------
Confidence 46778889999999999999999999988546999999999999999988888775322
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc----------c
Q 009538 81 QLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS----------D 150 (532)
Q Consensus 81 ~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~----------~ 150 (532)
+-+.|..+-++.|+|.|.+.....+.+-|...++ +-+..++.|.....+...+|-.++|.+.+ .
T Consensus 300 ~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~------~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~ 373 (403)
T PF03209_consen 300 SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG------RAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPA 373 (403)
T ss_pred cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 4578999999999999999999999999976532 22468999999999988888888887532 3
Q ss_pred ccchhhhHHHHHHHHHHHHHHH
Q 009538 151 VSWAWGLGIPAFMMFLSCAMFF 172 (532)
Q Consensus 151 ~gw~~~F~v~~~~~~l~~~~~~ 172 (532)
.+|-.+|.+.++.++++..+..
T Consensus 374 ~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 374 LAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888888887777665543
No 245
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.15 E-value=0.0028 Score=68.59 Aligned_cols=127 Identities=14% Similarity=0.154 Sum_probs=94.4
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
+.+..++.+++..+ ..++.++++|| ..+.+++++..++-...++.
T Consensus 124 ~s~~~~G~~vG~~i----~g~lsD~~GRk-------~~~~~~~~~~~i~~~~~a~a------------------------ 168 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLI----FGPLSDRFGRK-------PVLLVSLLLFIIFGILTAFA------------------------ 168 (521)
T ss_pred HHHHHHHHHHHHhh----heehHhhcccH-------HHHHHHHHHHHHHHHHHHHh------------------------
Confidence 34444455555444 33447776766 57777777777666555554
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCc
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLN 479 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (532)
.+.+..++.-++.|++........+.+..|..+++.|+.+..+ ....+.++.+++...+++.. +
T Consensus 169 ~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~------- 232 (521)
T KOG0255|consen 169 PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------D------- 232 (521)
T ss_pred CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------h-------
Confidence 4788888889999999999999999999999999999999999 88888999999988888764 2
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 009538 480 KGRLDYFYYLVAALGLLNFGF 500 (532)
Q Consensus 480 ~~~~~~~~~~~~~~~vv~~~~ 500 (532)
+-+.+++..+..++.++.
T Consensus 233 ---Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 233 ---WRWLFWIISIPSGLFLLL 250 (521)
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 345666666666655555
No 246
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.93 E-value=0.079 Score=58.65 Aligned_cols=313 Identities=8% Similarity=-0.081 Sum_probs=197.4
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHH
Q 009538 5 TATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAF 84 (532)
Q Consensus 5 ~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (532)
......++|....++..+.....+|...|+-..+..-+....++.+...+.+. +.. +...+...
T Consensus 21 ~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai-~a~---------------~~~~~~~~ 84 (654)
T TIGR00926 21 SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF-GAI---------------PSSGHPLH 84 (654)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-ccC---------------cccccchH
Confidence 34556778888889999999999999877778888888777777777777642 110 11112344
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcccccc-chh-------h
Q 009538 85 LFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS-WAW-------G 156 (532)
Q Consensus 85 l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~g-w~~-------~ 156 (532)
..+.-+.+.+++++..++.+.+-++....-+ .+.+.+..+.+++..+.+.+. .+++..+..+.. +.. -
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNiG-Slis~~i~~~l~~~~~~fg~~~~~ 160 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINAG-SLISTIITPILRGDVGCFGCQDCY 160 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccccCcch
Confidence 5667788899999999999999999876432 367778999999999988875 577777766543 321 2
Q ss_pred hHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHhcccCCCCCCcccccccCCcccccCCCCCCCcccch
Q 009538 157 LGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKKRHLKLPEEPWLTLHNHIPKNCINSKLPHTGQFRCL 236 (532)
Q Consensus 157 F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (532)
++..++.+++.++.++.+...++..++++.+...+.++...+....+.+.
T Consensus 161 ~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~------------------------------ 210 (654)
T TIGR00926 161 PLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRF------------------------------ 210 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhh------------------------------
Confidence 23455566666666677766665555544433333333332222111000
Q ss_pred hhhcccCCcccccCCCCCCCCCccch--hhhhhhhhhhhhhHhHHHHHHHHHHHhcccchhhhhhhhccCcccCCcccee
Q 009538 237 DKAAIMTPEDQIKSDGSAINPWRLSS--MQKVEEVKVLIRVIPIWASAIVYYVALVQQQTYVVFQALQSDRRVGNTHFKI 314 (532)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (532)
.. .+......|.... +...++.+...+++.++...+.+++.+.+.......+..+.++..+ .+..
T Consensus 211 -----~~------~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~--~l~g 277 (654)
T TIGR00926 211 -----ST------RSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDG--DVGG 277 (654)
T ss_pred -----cc------CCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcC--ccCC
Confidence 00 0000001221111 1122345667778888878887887776654455455444544433 2222
Q ss_pred ChhhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009538 315 PAASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLA 383 (532)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (532)
.......++.+-.++..++...+..+++.++.++ ..+..++.-+.+.+.++.+.+++.+....+..
T Consensus 278 ~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~---~~~ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 278 FEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKC---GTRFTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred EecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhc---CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344567778888888888888777888887554 55677788888888888888888876555555
No 247
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.91 E-value=0.011 Score=63.78 Aligned_cols=110 Identities=18% Similarity=0.146 Sum_probs=85.2
Q ss_pred hhhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCc
Q 009538 317 ASYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGA 396 (532)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (532)
+.+.....++..++.++.++ +.|+++|| ..+..+.++..++.++.+..
T Consensus 92 s~~~s~~~lga~~g~l~~g~----l~d~~GRk-------~~l~~~~~~~~iG~ii~~~a--------------------- 139 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGR----LGDRIGRK-------KTLLLAVVLFLIGAIIIALA--------------------- 139 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHhhhH-------HHHHHHHHHHHHHHHHHHHh---------------------
Confidence 34555555555666666444 47777776 67777888888887777765
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009538 397 ISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVH 462 (532)
Q Consensus 397 ~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~ 462 (532)
.+.++++..-++.|+|.+........|.+|.+|++.||...+...+...+|..++ .+.+...
T Consensus 140 ---~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~ 201 (513)
T KOG0254|consen 140 ---PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGT 201 (513)
T ss_pred ---hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 3788999999999999999998999999999999999999999999988777777 4544443
No 248
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.90 E-value=0.63 Score=48.80 Aligned_cols=152 Identities=11% Similarity=-0.064 Sum_probs=85.1
Q ss_pred HHHHHHH----HHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHH
Q 009538 10 INIFSGT----TNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFL 85 (532)
Q Consensus 10 ~~~~~~~----~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (532)
+++|.+. ..++.+.-|...||. -|.|++..+.+..-++.++.+..-..--..+ ...++ ........+
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~-~~~~~-------~~~~~~~l~ 110 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSVAASCALFLLLLSYP-SSSSQ-------SSWLFIALF 110 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-ccccc-------cchHHHHHH
Confidence 4555544 345777788889996 9999999888877776655444311000000 00000 001122223
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHH
Q 009538 86 FTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMF 165 (532)
Q Consensus 86 ~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~ 165 (532)
.+.-++..++.=+......+.--||..--...++..+.+..+..-=.=-+--++||++.|.+....|.+....+.+..-+
T Consensus 111 ~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~ 190 (432)
T PF06963_consen 111 ALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNL 190 (432)
T ss_pred HHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence 33333333333334455556666775432212234445555555555667788999999999888888877776666555
Q ss_pred HHHHH
Q 009538 166 LSCAM 170 (532)
Q Consensus 166 l~~~~ 170 (532)
+.+.+
T Consensus 191 ~S~~v 195 (432)
T PF06963_consen 191 ASVFV 195 (432)
T ss_pred HHHHH
Confidence 55444
No 249
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.88 E-value=0.037 Score=56.38 Aligned_cols=87 Identities=14% Similarity=-0.001 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchh
Q 009538 356 QRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENM 435 (532)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~ 435 (532)
+-++.|..+++++..++.=+. ...++...+..+++.+.|.+...++.+.++....|++.
T Consensus 79 ~gi~lgL~l~avg~~lF~pAa---------------------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~ 137 (422)
T COG0738 79 AGIVLGLLLYAVGAALFWPAA---------------------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES 137 (422)
T ss_pred HHHHHHHHHHHHHHHHHhhhh---------------------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh
Confidence 678889999888876654221 12456677778899999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 436 RSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 436 rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
...-+.+...++.+|..++|.+.+.+..
T Consensus 138 a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 138 AAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 8889999999999999999999999876
No 250
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.71 E-value=0.93 Score=48.15 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=79.5
Q ss_pred hhhHHHHHHHHHHHHHH-HhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHh--hcccCCCCCCCCCCCCCCCCC---
Q 009538 4 ITATTLINIFSGTTNFA-TLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTA--AISKLHPPDCGNQDSGACPGP--- 77 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~-~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~--~~~~~~~~~~~~~~~~~~~~~--- 77 (532)
+...++.+...+.+.+. .++-+++++|+ +|++.+-+....|.+-.++.++.- .-..++|+.. .|-....-+
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~--~~~~~~~~~~~~ 119 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTAL--ADKLLSLLPPGF 119 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHH--HHHHHhhcchhh
Confidence 45677777766666655 88889999995 999999998888888888777752 1011111100 000000000
Q ss_pred -------CchhHHHHHHHHHHHHHhcccccc-ccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhcc
Q 009538 78 -------TPWQLAFLFTGLGLMVIGAGGIRP-CNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQ 148 (532)
Q Consensus 78 -------~~~~~~~l~~~r~l~G~g~g~~~p-~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~ 148 (532)
.++....+++.-=+- .-.... .--++..|.++.+|. .|.++++..+.|+|..+|+.+..++.
T Consensus 120 ~~~i~~~~~W~~~~FYv~~elw---~~~vvS~lFW~fandi~t~~qa------kRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 120 MGFIAILRIWSFALFYVMAELW---GSVVLSLLFWGFANQITTIDEA------KRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhhhhHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111222222111 122222 455678898875432 34899999999999999998877765
No 251
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.66 E-value=0.014 Score=52.05 Aligned_cols=103 Identities=11% Similarity=0.121 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 009538 11 NIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLG 90 (532)
Q Consensus 11 ~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 90 (532)
++......+.+++...+.++. |.|+++.++.+.+.+-.+..-. ++.+.++.+-.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-------------------------~~~~~l~~~s~ 97 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-------------------------PNSYTLYPASA 97 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-------------------------hhHHHHHHHHH
Confidence 344555677888899999995 9999999999988865555433 25678999999
Q ss_pred HHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhh
Q 009538 91 LMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIV 145 (532)
Q Consensus 91 l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g 145 (532)
+.|+|.+......-.++.+..++ +.+++..+++....+.+.++|.++.-
T Consensus 98 l~G~~~a~lW~aqg~ylt~~s~~------~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 98 LLGFGAALLWTAQGTYLTSYSTE------ETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHhhhhHHhhHhhhHHHHHcCCH------HHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986432 22334567777777777777755433
No 252
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.53 E-value=0.36 Score=48.91 Aligned_cols=109 Identities=13% Similarity=-0.008 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC----CCCCCCCCC--
Q 009538 404 WLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGA----STGDWLPED-- 477 (532)
Q Consensus 404 ~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~----~~~~~~~~~-- 477 (532)
..+..+.+.+...-......+++.++++|+..-|+.|.+.|....+|+.--..+..++.|..+-. .+.++....
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C~~~t~~~~c~~~~ 450 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQCVLATNKVTCITKA 450 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeeccccccceeeecch
Confidence 33445666666666666777899999999999999999999999998888788888887764310 001100000
Q ss_pred -------Cc---chhHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009538 478 -------LN---KGRLDYFYYLVAALGLLNFGFFLLCAKWYKYKG 512 (532)
Q Consensus 478 -------~~---~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~ 512 (532)
+. .-..+.+|....++.+++.+.+.++.++.++.+
T Consensus 451 ~~~~c~~l~gtc~~~~DGYyi~s~ici~ig~i~~~~~~~ki~~Lq 495 (510)
T KOG3574|consen 451 FPQLCLALGGTCLIARDGYYITSIICIVIGFIWFGLLKPKIKYLQ 495 (510)
T ss_pred HHHHHHHhcCEEEEEecceEEeeehhhhHHHHHHHHHHHHHHHHH
Confidence 00 001244566666666677666666666666554
No 253
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.43 E-value=0.0058 Score=63.73 Aligned_cols=122 Identities=17% Similarity=0.167 Sum_probs=92.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccC
Q 009538 353 TILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFP 432 (532)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P 432 (532)
+.++.+..|.++..++.+.++..+ ..+...+.+.++++++|.++.=+...+++.|.+|
T Consensus 90 G~~~tI~lGail~~iGh~~L~~~~----------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~ 147 (498)
T COG3104 90 GTRRTIVLGAILMAIGHLVLAISS----------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYP 147 (498)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc----------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcC
Confidence 344788999999999988877631 1245567778888889999999999999999988
Q ss_pred ch--hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009538 433 EN--MRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKY 510 (532)
Q Consensus 433 ~~--~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~ 510 (532)
++ .|-.+.++..+.-++|+.+++.+.+++.+.. ++...|.+.++-+.++++.+++..++.+.
T Consensus 148 ~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~----------------g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 148 KDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY----------------GWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred CCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh----------------CHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 76 3566777788888899999999999987532 34567777777777777877777665554
Q ss_pred cC
Q 009538 511 KG 512 (532)
Q Consensus 511 ~~ 512 (532)
..
T Consensus 212 ~~ 213 (498)
T COG3104 212 IG 213 (498)
T ss_pred CC
Confidence 43
No 254
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.18 E-value=0.14 Score=49.45 Aligned_cols=93 Identities=18% Similarity=0.083 Sum_probs=65.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccC
Q 009538 353 TILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFP 432 (532)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P 432 (532)
.+...+.+|.+...++..+...... +. ..+.+.|.+....++.+.+.....++......+.+|
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~--------~~---------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP 126 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVS--------GR---------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP 126 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh--------Cc---------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc
Confidence 3546777888888777766554421 10 122355555555566667777777777777889999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 433 ENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 433 ~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
+ .||++.|+......+++.+-..+...+..
T Consensus 127 ~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 127 R-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred c-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 6 59999999999999999998888777653
No 255
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.13 E-value=0.00037 Score=73.75 Aligned_cols=141 Identities=16% Similarity=0.091 Sum_probs=84.4
Q ss_pred HHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHH-HHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009538 15 GTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLS-LTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMV 93 (532)
Q Consensus 15 ~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 93 (532)
+...++.+++.++.||+ |||+.++++..+.++..+.++ .....+. . ++..+...+....+...
T Consensus 297 ~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~~~~~~~~~~~~~~--------~-------~~~~~~~~i~~~~l~~~ 360 (451)
T PF00083_consen 297 LVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAICSLILGIIFFLGVS--------S-------SSWWSILSIVFLALFFA 360 (451)
T ss_pred ccccccccccccccccc-ccccccccccccccccccccccccccccc--------c-------ccccccccceeeeeccc
Confidence 33446777788999995 999999999999888887775 1110000 0 00012222222222211
Q ss_pred HhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 009538 94 IGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFL 173 (532)
Q Consensus 94 ~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~~~~ 173 (532)
.......+....+.+|.||.+ .|.+..++.+....++.++++.+...+.+..+-...|.+.+...++..++.+.
T Consensus 361 ~~~~g~~~~~~~~~~ElfPt~------~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 361 FFSLGWGPLPWIYTAELFPTK------VRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred ccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 222233466778889999853 23457888778888899988888888877666344555555554445444444
Q ss_pred hcce
Q 009538 174 GSRL 177 (532)
Q Consensus 174 ~~~~ 177 (532)
..|+
T Consensus 435 ~lpE 438 (451)
T PF00083_consen 435 FLPE 438 (451)
T ss_pred EEee
Confidence 4444
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.11 E-value=0.014 Score=45.43 Aligned_cols=44 Identities=23% Similarity=0.232 Sum_probs=38.8
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHH
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVAS 45 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~ 45 (532)
+|+.+.+.+.++-.+...++++++|.++||+ ||+|.++....++
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 4678999999999999999999999999996 9999888776654
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.09 E-value=0.0052 Score=64.44 Aligned_cols=129 Identities=10% Similarity=0.007 Sum_probs=102.2
Q ss_pred HHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 009538 18 NFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAG 97 (532)
Q Consensus 18 ~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g 97 (532)
.+.-++.++|..++ |+-+++.+++..+.+=.+...+.. |.|+.+.--+++|+-.|
T Consensus 420 I~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~------------------------n~W~vLPieilqgit~a 474 (618)
T KOG3762|consen 420 ILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ------------------------NPWMVLPIEILQGITHA 474 (618)
T ss_pred HHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc------------------------CchheeeHHHHHHHHHH
Confidence 34667788999996 999999999999998888888874 67888899999999999
Q ss_pred ccccccccccccCCCCCCCCcccchhhhhhhh-HHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHHHHhhcc
Q 009538 98 GIRPCNLAFGADQFNPNTESGKQGITSFFNWY-YFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSR 176 (532)
Q Consensus 98 ~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~-~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~~~~~~~ 176 (532)
.+..++.+|+++..||+-++ ++-++. ...-.+|--+|.++||.+.+.+|=|..|.+.++..++.++.+....+
T Consensus 475 liWaa~~sY~s~vaPp~l~a------t~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 475 LIWAAIISYASHVAPPGLRA------TAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred HHHHHHHHHHHhhCCCcchH------HHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999998864322 223222 23445677788888899999999999999988887777776655443
Q ss_pred e
Q 009538 177 L 177 (532)
Q Consensus 177 ~ 177 (532)
.
T Consensus 549 ~ 549 (618)
T KOG3762|consen 549 L 549 (618)
T ss_pred h
Confidence 3
No 258
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.04 E-value=0.024 Score=58.50 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=84.8
Q ss_pred HHHHHhHHHHHhhcc---ccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009538 17 TNFATLLGAFLSDTY---FGRYKTLGFA-SVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLM 92 (532)
Q Consensus 17 ~~~~~l~~G~laD~~---~Grr~~l~~~-~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 92 (532)
..+.+++-|..+||. |||||-++.. .....++.++..+++.+....-++.... ........++++--+.
T Consensus 80 G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~-------~~~rai~~~~lg~~LL 152 (498)
T KOG0637|consen 80 GLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKP-------VKPRAIVLFILGFWLL 152 (498)
T ss_pred cceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccc-------cchHHHHHHHHHhHHH
Confidence 456788999999975 6998776654 4555667778888875543111111000 0113577788888888
Q ss_pred HHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccccccchhh
Q 009538 93 VIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWG 156 (532)
Q Consensus 93 G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~ 156 (532)
=+..-..+...-++++|...+.+.++ ++.+++..++.+|..+|+.++++ .+|+-.
T Consensus 153 D~A~n~~qgp~ra~L~Dl~~~d~~~~-----~Ans~f~~f~avGnvLGY~~g~y----~~~~~~ 207 (498)
T KOG0637|consen 153 DVANNTLQGPCRALLADLARGDAKKT-----RANSVFSFFMAVGNVLGYALGSY----LGLYKI 207 (498)
T ss_pred HhhhhhhhhhHHHHHHHhccChhhhh-----ccchhHHHHHHhcceeeeecccc----cCceEE
Confidence 88887777779999999876533222 27899999999999999888884 455543
No 259
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.82 E-value=0.0018 Score=69.98 Aligned_cols=64 Identities=13% Similarity=0.037 Sum_probs=2.9
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~ 464 (532)
..+.++...++.|+|.....+...+|+-|.++++..+.+.|+......+|..+|-.+.+.+++.
T Consensus 140 ~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 140 YFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRI 203 (539)
T ss_dssp ------------SSS-------------------------------------------------
T ss_pred HHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhc
Confidence 3566777889999999999999999999999999999999999999999999998888777643
No 260
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.092 Score=57.83 Aligned_cols=109 Identities=10% Similarity=-0.004 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC-CCCCCC-CCCC
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGA-STGDWL-PEDL 478 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~-~~~~~~-~~~~ 478 (532)
.+..++...++.|+|.....+...+|+-|.+-++......|+.+....+|-++|-.+.+.+......- ..+.-+ ++|.
T Consensus 236 ~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DP 315 (735)
T KOG3626|consen 236 PFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDP 315 (735)
T ss_pred hHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCc
Confidence 34456668899999999999999999999999999999999999999999998888887775442211 011111 1121
Q ss_pred cchhH-HHHHHHHHHHHHHHHHHHHHhhhccc
Q 009538 479 NKGRL-DYFYYLVAALGLLNFGFFLLCAKWYK 509 (532)
Q Consensus 479 ~~~~~-~~~~~~~~~~~vv~~~~~~~~~~~~~ 509 (532)
-+-+. ..-|++.+.+.++..+.++.+-++++
T Consensus 316 rWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 316 RWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 11122 22455555556666665555544444
No 261
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.75 E-value=0.012 Score=60.65 Aligned_cols=151 Identities=13% Similarity=0.102 Sum_probs=93.2
Q ss_pred hhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcccc
Q 009538 320 AIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISS 399 (532)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (532)
+....++.+++..+++++ .|+++|| ......++++.++.+..+... ++ .++
T Consensus 90 n~~A~vGti~GQl~FG~l----gD~~GRK-------~vYG~~liImIi~t~~~~~s~--------~~----------~~~ 140 (538)
T KOG0252|consen 90 NAAALVGTIFGQLFFGWL----GDKFGRK-------KVYGKELIIMIICSALSGLSV--------GT----------TSP 140 (538)
T ss_pred HHHHHHHHHHHHHHHHHH----Hhhhcch-------hhhhHHHHHHHHHHHHhccCC--------CC----------CCC
Confidence 334455677777776665 7777777 344555566656555333221 01 122
Q ss_pred ch-HHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCC
Q 009538 400 LS-GLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDL 478 (532)
Q Consensus 400 ~~-~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (532)
.+ .+|+...=+++|+|.+.=.|.+.+..+|.+-++.||.-.+.....+..|-..|..+.-.+...... -++..-
T Consensus 141 ~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~-----~~~~~~ 215 (538)
T KOG0252|consen 141 LGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEK-----IFNGPS 215 (538)
T ss_pred cchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhc-----cCCCCC
Confidence 22 345555668999999999999999999999999999999888777777666666555444322211 111111
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009538 479 NKGRLDYFYYLVAALGLLNFGFFLLC 504 (532)
Q Consensus 479 ~~~~~~~~~~~~~~~~vv~~~~~~~~ 504 (532)
...+.+.+|=+...++++-.+..+..
T Consensus 216 ~~~~ld~vWRl~~glg~vpa~~~ly~ 241 (538)
T KOG0252|consen 216 TYPHLDGVWRIIFGLGAVPALLVLYF 241 (538)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12246777777666666665555444
No 262
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.35 E-value=0.083 Score=41.69 Aligned_cols=55 Identities=16% Similarity=0.036 Sum_probs=51.5
Q ss_pred CchhhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHh
Q 009538 1 MKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTA 56 (532)
Q Consensus 1 ~~~~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~ 56 (532)
+|.++++|+.+.-++|+.++++...++.++. .+++.+..+.+...+..+.+++.+
T Consensus 24 ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 24 LSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4788999999999999999999999999995 889999999999999999999985
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.32 E-value=0.12 Score=53.21 Aligned_cols=125 Identities=16% Similarity=0.093 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCch-
Q 009538 356 QRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPEN- 434 (532)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~- 434 (532)
+.+.+|.++..+|.+++.+... +.. -.+..+.+.+.+.+.++++|.+..=|....+..|.++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~------~~~---------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAI------PPS---------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHT------SSS---------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHh------cch---------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 4577788888888877555421 000 012334567778889999999999999999999998876
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009538 435 --MRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLLCAKWYKYK 511 (532)
Q Consensus 435 --~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~ 511 (532)
.|......+...-.+|..++..+.+++.+.. ++...|.+.++.++++.+.++...+.++.+
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~----------------~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY----------------GWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-----------------HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhcccc----------------chhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 4666777788888899999988888876422 356677777777777777666654444443
No 264
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.25 E-value=0.34 Score=51.38 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=63.7
Q ss_pred hHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 009538 416 EAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGL 495 (532)
Q Consensus 416 ~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 495 (532)
.+.......+++++....+.|....|+.+.+.+.+..+++.+.+...... ++..++.+..+..+
T Consensus 126 ~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~----------------~~a~~f~ia~~~~~ 189 (463)
T KOG2816|consen 126 FSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL----------------GIALVFLIAAASGI 189 (463)
T ss_pred hhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc----------------CchHHHHHHHHHHH
Confidence 33445667899999999999999999999999999999999998876532 34557777777777
Q ss_pred HHHHHHHHhhhcccccC
Q 009538 496 LNFGFFLLCAKWYKYKG 512 (532)
Q Consensus 496 v~~~~~~~~~~~~~~~~ 512 (532)
+..+..+++.+|.....
T Consensus 190 ~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 190 LSLLYMLLFLPESLQEK 206 (463)
T ss_pred HHHHHHhhccccccCcc
Confidence 88888787777755443
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.82 E-value=0.33 Score=51.26 Aligned_cols=90 Identities=20% Similarity=0.127 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhccc---CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCC
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQF---PENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPED 477 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~---P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (532)
+.......+++..+|.++.....-+.+.|.. |++ +|..++.....+.+|+.++..+.|.+.+..+
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~----------- 152 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG----------- 152 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-----------
Confidence 3444555667788888888888888887765 555 7889999999999999999999988876431
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009538 478 LNKGRLDYFYYLVAALGLLNFGFFLLCAKW 507 (532)
Q Consensus 478 ~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 507 (532)
+...|.+.+.+.++..+..+....|
T Consensus 153 -----~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 153 -----PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred -----CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 2335555566666655555555444
No 266
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.40 E-value=0.63 Score=48.30 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=64.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHH--HHHHHHHHHHHHhHhhhhhhhhhhhccc
Q 009538 354 ILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGL--WLIPQLSLIGFSEAFTIIAEVEFYYKQF 431 (532)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~l~~~g~~~~~~~~~~~~~~~~ 431 (532)
.+....+|..+..++..+-.+... +..+...+ .......+.++++.+......-....-+
T Consensus 108 LR~a~llgt~ln~iGa~Ir~iss~------------------p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF 169 (480)
T KOG2563|consen 108 LRTALLLGTVLNGIGAWIRLISSL------------------PFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWF 169 (480)
T ss_pred hHHHHHHHHHHHHHHHHHhhhccC------------------ccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhC
Confidence 335677777777777655444310 01112333 4455666777777777655455666679
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 009538 432 PENMRSIGGSLAFVGFAISNYLNGFLISMVHRFT 465 (532)
Q Consensus 432 P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~ 465 (532)
|.+.|+.+..+..+.+.+|.+++..+-+.+....
T Consensus 170 ~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 170 PPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred CcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 9999999999999999999999998888876543
No 267
>PRK03612 spermidine synthase; Provisional
Probab=94.27 E-value=0.47 Score=51.22 Aligned_cols=144 Identities=9% Similarity=-0.045 Sum_probs=79.8
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHH-HHHHHHHHHHH-HHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLG-FASVASFLGML-VLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~-~~~~~~~ig~i-l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
.+.+.++++|.++..+++.++|+++++- -|+...+ +++.+.+..+. +...+..+.. ..
T Consensus 50 ~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~-------------------~~ 109 (521)
T PRK03612 50 TQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALILYAAFAFQG-------------------LS 109 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HH
Confidence 4567899999999999999999988553 3332221 11111111111 1111110000 01
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc-cccc-hhhhHH
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS-DVSW-AWGLGI 159 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~-~~gw-~~~F~v 159 (532)
...++...++.++-.|+..|....+..+... +..++..+..|....+|+++|.++.+++.- .+|- +..+.+
T Consensus 110 ~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-------~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~ 182 (521)
T PRK03612 110 RLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-------QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALT 182 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 1223444556777778888877766655311 011234777888899999999999888653 5664 444444
Q ss_pred HHHHHHHHHHHHHhh
Q 009538 160 PAFMMFLSCAMFFLG 174 (532)
Q Consensus 160 ~~~~~~l~~~~~~~~ 174 (532)
..+-.+++++.++..
T Consensus 183 a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 183 GSLNLLAALVFLWLF 197 (521)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444444444433333
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.70 E-value=1.4 Score=39.20 Aligned_cols=61 Identities=16% Similarity=0.234 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMV 461 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~ 461 (532)
+.+.+++.-++.|++.+..+++.-.++.+...++.+++..++.......+..+|..+.-.+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677788889999999999999999999999999999999999888888888887665443
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.18 E-value=12 Score=39.80 Aligned_cols=62 Identities=8% Similarity=-0.098 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHhHhhhh-hhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 402 GLWLIPQLSLIGFSEAFTII-AEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 402 ~~~~i~~~~l~~~g~~~~~~-~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
.|.....|+...+....... ..|.++.|....+...+..++..+..++|..+++.+...+.+
T Consensus 128 ~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 128 IWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666667666555554 789999999999999999999999999999999998888764
No 270
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.96 E-value=1.6 Score=45.56 Aligned_cols=129 Identities=13% Similarity=0.069 Sum_probs=86.6
Q ss_pred hhhhhhhhhhHhHHhhhccchhhhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCcc
Q 009538 318 SYAIFSMLGLTIWIPIYDRIIVPRLQRLTKKEGGITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAI 397 (532)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (532)
......++.-++..|+++..+++--.|++||+ .-+..+.+..++++++.+...+...... ++-+.+.
T Consensus 71 ~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR------PfI~~~s~~i~~~l~Lig~aaDig~~lg-------d~~~~~~ 137 (498)
T KOG0637|consen 71 IIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR------PFILAGSLLIAVSLFLIGYAADIGLLLG-------DNERKPV 137 (498)
T ss_pred ccccccccccceeccccccccccccccccccc------chHHHhhHHHHHHHhhhhhHhhhhHHhc-------CCccccc
Confidence 34456677777778888877666666666653 3456677777777777776543221111 2222234
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHH-HHHHHHHHHHHHHHHHHHHHH
Q 009538 398 SSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSI-GGSLAFVGFAISNYLNGFLIS 459 (532)
Q Consensus 398 ~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~-~~gl~~~~~~ig~~l~~~~~~ 459 (532)
.+......++.+.+.-++.-....+.-++..|..-...+-+ +++.+.+...+|+.+|=...+
T Consensus 138 ~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 138 KPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred chHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 44555566667777778887888888899999876666666 999999999999998866654
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.60 E-value=6.4 Score=38.03 Aligned_cols=56 Identities=13% Similarity=0.360 Sum_probs=37.0
Q ss_pred hhhhhhhHHHHhHHHHHHHHhhhhc---c--ccccchhhhHHHHHHHHHHHHHHHhhccee
Q 009538 123 TSFFNWYYFTFTFAMMISLTVIVYV---Q--SDVSWAWGLGIPAFMMFLSCAMFFLGSRLY 178 (532)
Q Consensus 123 ~~~~~~~~~~~~~G~~~g~~~~g~i---~--~~~gw~~~F~v~~~~~~l~~~~~~~~~~~~ 178 (532)
+.......++.|+|.++.-+..-.- . ..-.|++++.+.+++.++-++++.+..++.
T Consensus 5 ~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 5 SILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred ceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3456667778889988775442222 1 123599999998888777777766655554
No 272
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=90.27 E-value=4 Score=43.21 Aligned_cols=46 Identities=11% Similarity=0.029 Sum_probs=33.8
Q ss_pred hhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 418 FTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 418 ~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
.-..+.-.++.++..++.++-+.-.+...+.+|.+++-.+.-.+.+
T Consensus 134 TQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns 179 (544)
T PF13000_consen 134 TQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNS 179 (544)
T ss_pred cCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCC
Confidence 3344555667777777878888888888888888888777766654
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=89.38 E-value=15 Score=38.66 Aligned_cols=60 Identities=7% Similarity=-0.047 Sum_probs=36.9
Q ss_pred hhhhccc--CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 009538 425 EFYYKQF--PENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGF 500 (532)
Q Consensus 425 ~~~~~~~--P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~ 500 (532)
+++..++ .++.....++..-=.-.+...++|.+.|.+.+.. ++.....++++++++....
T Consensus 134 DWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~----------------s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 134 DWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA----------------SPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred chhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----------------CHHHHHHHHHHHHHHHHHH
Confidence 4555555 3333445555554445559999999999997632 2344555666777766654
No 274
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.86 E-value=3 Score=44.02 Aligned_cols=125 Identities=18% Similarity=0.226 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhHH----HHH---hhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchh
Q 009538 9 LINIFSGTTNFATLLG----AFL---SDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQ 81 (532)
Q Consensus 9 i~~~~~~~~~~~~l~~----G~l---aD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (532)
+..++.++..++...+ +.+ .++ +||++++.++..+..++.++.-.+. |. +..-+|.....-...++
T Consensus 280 ~~ai~~~~~g~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~--p~----dap~~~t~~~~~~~~~~ 352 (461)
T KOG3098|consen 280 LIAIYSIGIGLGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSF--PN----DAPLRPTDSPPLLFTPS 352 (461)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccc--cc----cCCCCCCcccccccccc
Confidence 4455555555555543 344 466 4999999999999999888877652 21 11111112222233456
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhc
Q 009538 82 LAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYV 147 (532)
Q Consensus 82 ~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i 147 (532)
...-++.-++.|++-++.....+.++++.+|. + +. .+++++-+--.++..++....+..
T Consensus 353 ~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~-~---~~---~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 353 YYLALIIGFLLGFGDACFNTQRYVIIALLYPD-D---RA---QAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC-c---hH---HHHHHHHHHHHHHHHHHhhhhhhh
Confidence 66777788999999999999999999998842 2 11 356666555666665554444443
No 275
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=87.50 E-value=35 Score=34.66 Aligned_cols=64 Identities=19% Similarity=0.151 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhh-----hcccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHhccc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFY-----YKQFPENMRSIGGSLAF-VGFAISNYLNGFLISMVHRF 464 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~-----~~~~P~~~rg~~~gl~~-~~~~ig~~l~~~~~~~~~~~ 464 (532)
+.+.++..=++-|++..+.....-++. ...+|++..+...+... ..+.+-.++++.+...+.+.
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~ 189 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW 189 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 456666777788888877666544333 34467666666665554 44555566666666665543
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=85.67 E-value=55 Score=35.09 Aligned_cols=134 Identities=14% Similarity=0.141 Sum_probs=72.8
Q ss_pred hhHHHHHHHHHH-HHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHh--hcccCCCCCCCCCCCCCCCCCCc--
Q 009538 5 TATTLINIFSGT-TNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTA--AISKLHPPDCGNQDSGACPGPTP-- 79 (532)
Q Consensus 5 ~~~~i~~~~~~~-~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~--~~~~~~~~~~~~~~~~~~~~~~~-- 79 (532)
....+.....+. ..+...+-.+++|++ +|.+++-+.+..+.....+.++-- +-..+|++....+|..- .+..
T Consensus 59 ~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~--~~~~~~ 135 (491)
T PF03219_consen 59 VIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAI--LPPGFK 135 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhh--ccchHH
Confidence 334444444443 445677889999996 999999988888888777777641 11124442222221100 0000
Q ss_pred --------hhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc
Q 009538 80 --------WQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS 149 (532)
Q Consensus 80 --------~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~ 149 (532)
+.+..+++.-=+- |.-...-.=-++..|.++.+| -.+.+.++..+.|+|.+++..+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElw--gsvvlSlLFW~fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELW--GSVVLSLLFWGFANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011111111111 111111112455567665432 2358999999999999999888777765
No 277
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=81.39 E-value=21 Score=33.94 Aligned_cols=63 Identities=17% Similarity=0.141 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCc-hhHHHHHHHHHH-HHHHHHHHHHHHHHHhcc
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPE-NMRSIGGSLAFV-GFAISNYLNGFLISMVHR 463 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~-~~rg~~~gl~~~-~~~ig~~l~~~~~~~~~~ 463 (532)
..+.++......+++.+...+....+..+..|+ +.|+...+.... ...++..+++.+.+.+..
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555555668888888888999999999998 678888888877 577777888766666554
No 278
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.04 E-value=13 Score=30.51 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=32.7
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 009538 429 KQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTKG 467 (532)
Q Consensus 429 ~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~ 467 (532)
+...++.++.++++-...-.+++.+..+++||+.|...+
T Consensus 33 ~~~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 33 KSSAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred cccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344567789999999999999999999999999987643
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=77.71 E-value=81 Score=31.62 Aligned_cols=107 Identities=17% Similarity=0.180 Sum_probs=60.7
Q ss_pred HHHhHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 009538 19 FATLLGAFLSDTY-FGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAG 97 (532)
Q Consensus 19 ~~~l~~G~laD~~-~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g 97 (532)
+--+..-..-||+ +|.|- .+...+.+.|..+.+++.+ .++=++|-.+..+|.|
T Consensus 77 ~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s------------------------~~~sL~GV~~aSissG 130 (409)
T KOG3880|consen 77 AIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNS------------------------VPMSLLGVVFASISSG 130 (409)
T ss_pred HHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccc------------------------hhHHHhhhhhhhhcCC
Confidence 3444455567776 45554 4455677778888888864 5567778888888888
Q ss_pred ccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc--cccchhhhHHHHH
Q 009538 98 GIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS--DVSWAWGLGIPAF 162 (532)
Q Consensus 98 ~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~--~~gw~~~F~v~~~ 162 (532)
.-...-.++-+. |++ . ..+.|..+.....++|..-=.++++ +++=+-..++...
T Consensus 131 lGEiTFL~lss~-Y~~----~------~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~ 186 (409)
T KOG3880|consen 131 LGEITFLALSSR-YPS----I------VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLF 186 (409)
T ss_pred cceeehhhhhcc-CCC----c------eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHH
Confidence 877755554444 432 1 2444444444444455433333443 3444555554443
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.57 E-value=1.2e+02 Score=32.53 Aligned_cols=60 Identities=12% Similarity=-0.091 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHH-hHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 404 WLIPQLSLIGFS-EAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 404 ~~i~~~~l~~~g-~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
.....|++.-+- .....-..|.++.|..+.+...+.-++..+...+|..+++.+...+.+
T Consensus 145 t~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 145 TFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444433 233333568999999999999999999999999999999998888765
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=73.00 E-value=80 Score=33.34 Aligned_cols=36 Identities=14% Similarity=0.015 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHH
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRS 437 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg 437 (532)
..+..+...++.+++.++.......++. .+|++..+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~~~ 140 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTYSS 140 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHHHH
Confidence 3455555667788888888888777776 56655433
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=70.51 E-value=1.4e+02 Score=31.23 Aligned_cols=63 Identities=13% Similarity=0.098 Sum_probs=49.3
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
.+.+++-...++.|++.+. ..+-++|++..+|++.--++.+......-+|..++..++-.+.+
T Consensus 92 ~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677777777888887765 45567899999999988888888888888888888877777664
No 283
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=64.12 E-value=2.1e+02 Score=30.63 Aligned_cols=62 Identities=13% Similarity=-0.075 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhH-hhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009538 402 GLWLIPQLSLIGFSEA-FTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHR 463 (532)
Q Consensus 402 ~~~~i~~~~l~~~g~~-~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~ 463 (532)
-|.....|++.-+-.. ...-..|.++.|+...+...+..++.++..+++..+++.+..++..
T Consensus 147 ~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 147 EWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3555566666555333 3344678889999999999999999999999999999999988764
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=63.99 E-value=2e+02 Score=30.38 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009538 401 SGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLI 458 (532)
Q Consensus 401 ~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~ 458 (532)
+-++.++.+++.|+..+......+.+..+.++++.|..+..+..++-.+|-.+|+.+.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566667788999999988888888999999999999999999888888888887664
No 285
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=56.40 E-value=2.5e+02 Score=29.19 Aligned_cols=58 Identities=22% Similarity=0.269 Sum_probs=45.9
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 009538 400 LSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFL 457 (532)
Q Consensus 400 ~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~ 457 (532)
.+-+|.+....++|+..+-.....+.++.+..|++.+..+..+..+.-..|-..|..+
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3567778888889998888888888899999999998888888777666666666544
No 286
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=56.00 E-value=48 Score=34.23 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=32.6
Q ss_pred HHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009538 410 SLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMV 461 (532)
Q Consensus 410 ~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~ 461 (532)
+++-+.-+.-..+.-.++.++..++.-|-+.-...+.+..|.+++..+.-.+
T Consensus 141 ~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 141 LLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred HHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEe
Confidence 3444444455556666777777677677777776767777777766554444
No 287
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=54.30 E-value=1.2e+02 Score=31.61 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhcccCchh
Q 009538 356 QRMAIGMILAIFTMIISGIIEDKRRSLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENM 435 (532)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~ 435 (532)
.++.....++.+++++.+.. .+.+.-++..++.+++.++.-.....+. ..+|+.
T Consensus 90 ~Ri~~~~~l~~~g~l~va~~------------------------~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y~~~- 143 (402)
T PF02487_consen 90 IRILICVALSAAGMLLVAFS------------------------PSVWVRLLGVVLASLSSGLGEVTFLSLT-HFYGKS- 143 (402)
T ss_pred HHHHHHHHHHHHHHhheeec------------------------cchhHHHHHHHHHhhhhhhhHHHHHHHH-HhcCcc-
Confidence 45666777777777776653 2445556666666666665555544443 345542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009538 436 RSIGGSLAFVGFAISNYLNGFLISMV 461 (532)
Q Consensus 436 rg~~~gl~~~~~~ig~~l~~~~~~~~ 461 (532)
..+.+......++.+|......+
T Consensus 144 ---~l~~wssGTG~aGl~Ga~~y~~l 166 (402)
T PF02487_consen 144 ---SLSAWSSGTGGAGLVGALYYLGL 166 (402)
T ss_pred ---ccccccCCcChhhHHHHHHHHHH
Confidence 34555555556666666555444
No 288
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=50.91 E-value=1.1e+02 Score=34.45 Aligned_cols=49 Identities=18% Similarity=0.084 Sum_probs=34.9
Q ss_pred hccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccc
Q 009538 29 DTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIR 100 (532)
Q Consensus 29 D~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~ 100 (532)
|++-||.|-++++.+.|+++++...+.... -+.+..+-.+.+++.++..
T Consensus 51 ~~~~~R~~~l~it~~~f~i~sl~v~ll~~~-----------------------p~~~~~~l~~~tf~~~mlg 99 (701)
T TIGR01667 51 DRLTGRLKNLIITLSCFSIASFLVQLLFPK-----------------------PWLFPFLLTLLTFGFILLG 99 (701)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------hHHHHHHHHHHHHHHHHHH
Confidence 344477899999999999999998876532 3456666666766666533
No 289
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=49.86 E-value=1e+02 Score=33.88 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=83.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-Ccc-cccCCccccchHHHHHHHHHHHHHHhHhhhhhhhhhhhc
Q 009538 352 ITILQRMAIGMILAIFTMIISGIIEDKRRSLALSRP-VGL-EQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYK 429 (532)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~i~~~~l~~~g~~~~~~~~~~~~~~ 429 (532)
.++...+.++.++..+++.+........ .+-+... ... ...+++++..-...+...+-++++|.+..-+...++.+|
T Consensus 101 ~gry~tI~~~s~i~~~G~~~lt~~a~~~-~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGad 179 (571)
T KOG1237|consen 101 LGRYFTINIGSLISLLGLFGLTLSAMIP-ALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGAD 179 (571)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccc
Confidence 3456788888888888866655443211 1111000 000 001223333344455566677888999999999999999
Q ss_pred ccCc----hhHH--HHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 009538 430 QFPE----NMRS--IGGSLAFVGFAISNYLNGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAALGLLNFGFFLL 503 (532)
Q Consensus 430 ~~P~----~~rg--~~~gl~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~ 503 (532)
.+++ +.+. ..+.++.+...+|..++..+..++-+.. + +...|.+..+.++++++.++.
T Consensus 180 Qfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~------~----------w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 180 QFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV------G----------WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred ccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc------c----------ceeeccHHHHHHHHHHHHHHc
Confidence 9882 2223 5677888888889988888877764322 2 234555666666666665555
Q ss_pred hhhccc
Q 009538 504 CAKWYK 509 (532)
Q Consensus 504 ~~~~~~ 509 (532)
..+.++
T Consensus 244 g~~~y~ 249 (571)
T KOG1237|consen 244 GFPFYR 249 (571)
T ss_pred CceeEE
Confidence 444444
No 290
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=48.61 E-value=79 Score=22.37 Aligned_cols=35 Identities=9% Similarity=0.152 Sum_probs=23.3
Q ss_pred HHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHH
Q 009538 14 SGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLG 48 (532)
Q Consensus 14 ~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig 48 (532)
.....+.....|+..|+++|.++.+.+...+..+.
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 33455567788888888889977666655544443
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.48 E-value=69 Score=26.37 Aligned_cols=31 Identities=10% Similarity=-0.148 Sum_probs=21.0
Q ss_pred HHHHHHHhHHHHHhhccccchHHHHHHHHHH
Q 009538 15 GTTNFATLLGAFLSDTYFGRYKTLGFASVAS 45 (532)
Q Consensus 15 ~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~ 45 (532)
++..+.....|||.|+|+|-++-.++...+.
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lll 83 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLL 83 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 3334445566899999999998766644443
No 292
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=43.31 E-value=1.8e+02 Score=32.76 Aligned_cols=57 Identities=19% Similarity=0.213 Sum_probs=38.3
Q ss_pred hHHHHHhh---ccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccc
Q 009538 22 LLGAFLSD---TYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGG 98 (532)
Q Consensus 22 l~~G~laD---~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 98 (532)
.+.+-++| ++-||.|-++++.+.+.++++...+.... -+.+..+-.+.+++.++
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~-----------------------p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK-----------------------PWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------------------cHHHHHHHHHHHHHHHH
Confidence 33344554 44478899999999999999887776532 34566677677666665
Q ss_pred ccc
Q 009538 99 IRP 101 (532)
Q Consensus 99 ~~p 101 (532)
...
T Consensus 98 lga 100 (704)
T TIGR01666 98 LGA 100 (704)
T ss_pred HHH
Confidence 433
No 293
>PRK03612 spermidine synthase; Provisional
Probab=40.81 E-value=4.5e+02 Score=28.48 Aligned_cols=51 Identities=10% Similarity=0.088 Sum_probs=30.2
Q ss_pred HHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009538 411 LIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVH 462 (532)
Q Consensus 411 l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~ 462 (532)
+.++-.+...|....+..+... +.-|...|-....+.+|+.+|+.+.+.++
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 3445445555554444433222 12355667777788888888888887775
No 294
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=40.76 E-value=1e+02 Score=29.85 Aligned_cols=28 Identities=21% Similarity=0.340 Sum_probs=16.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009538 433 ENMRSIGGSLAFVGFAISNYLNGFLISM 460 (532)
Q Consensus 433 ~~~rg~~~gl~~~~~~ig~~l~~~~~~~ 460 (532)
.-+|..++|+..+.....+.+.+...+.
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~gr 101 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGR 101 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 3455566666666565656665555543
No 295
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=39.38 E-value=44 Score=25.75 Aligned_cols=50 Identities=14% Similarity=0.249 Sum_probs=30.9
Q ss_pred hhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHHHHhhcceee
Q 009538 127 NWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSRLYA 179 (532)
Q Consensus 127 ~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~~~~~~~~~~ 179 (532)
.+.+....++++++ .+.|++.+ +.+..+++.++..++.+++...-.|.|.
T Consensus 11 ~l~~~il~~~~iis-fi~Gy~~q--~~~~~~~~~~~g~~~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 11 KLMQYILIISAIIS-FIVGYITQ--SFSYTFYIYGAGVVLTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHhheeCCcHhhc
Confidence 34455677777777 56677665 4566777776666666665555555543
No 296
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=37.78 E-value=3.3e+02 Score=25.14 Aligned_cols=41 Identities=17% Similarity=0.433 Sum_probs=25.7
Q ss_pred hhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHH
Q 009538 126 FNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLS 167 (532)
Q Consensus 126 ~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~ 167 (532)
-...+....++.++|..+++++.+..+. +..+++....++.
T Consensus 164 ~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~~~ 204 (209)
T PF06912_consen 164 RALRYLLIILSFFIGAILGALLYRRLGF-WALLLPALLLLLL 204 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHH
Confidence 3345666777777777777888777774 4555555443333
No 297
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=33.97 E-value=1.7e+02 Score=23.93 Aligned_cols=36 Identities=6% Similarity=-0.043 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHH
Q 009538 10 INIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVAS 45 (532)
Q Consensus 10 ~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~ 45 (532)
++...+...+...+.|...|+.||-++.+.+.+++.
T Consensus 48 IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 48 IGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 334444455667777777888789877555443333
No 298
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=32.30 E-value=5.8e+02 Score=26.31 Aligned_cols=99 Identities=7% Similarity=0.036 Sum_probs=59.5
Q ss_pred HHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccc
Q 009538 19 FATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGG 98 (532)
Q Consensus 19 ~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 98 (532)
+.-++.=.|.|-. =-|++++.-.+.+.+-.+++-+..+ .+.+-+.-++- |.
T Consensus 57 v~LvpvFlLTD~l-rYKPvivlq~ls~v~~w~~lv~g~s------------------------V~~mQvlE~Fy----G~ 107 (433)
T KOG3810|consen 57 VGLVPVFLLTDYL-RYKPVVVLQALSGVPVWIMLVFGPS------------------------VKAMQVLEFFY----GP 107 (433)
T ss_pred HHHHHHHHHhhhh-hcceeeeeeccchhHHHHHHHhcCC------------------------chheeeehhhc----Ch
Confidence 3444555588985 5566666666666666666666643 22222333333 45
Q ss_pred cccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHHHhhhhccc
Q 009538 99 IRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS 149 (532)
Q Consensus 99 ~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~g~i~~ 149 (532)
..++-.+|-+.++.+.++.. ..+..+.-..+.-.|-..|..++-.+..
T Consensus 108 ~tAaEIAYysYIYs~Vd~~~---Yqrvt~y~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 108 ATAAEIAYYSYIYSKVDPEM---YKRVTGYCRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred HHHHHHhhhheeeeecCHHH---HHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence 55556677777777665433 2346667677788888888777666654
No 299
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=30.29 E-value=2.1e+02 Score=20.62 Aligned_cols=44 Identities=5% Similarity=0.121 Sum_probs=30.7
Q ss_pred hhhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHH
Q 009538 126 FNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCA 169 (532)
Q Consensus 126 ~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~ 169 (532)
.-...|+..+|.++|++.+......+++...-.++.++.++...
T Consensus 4 ivt~fWs~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~ 47 (57)
T PF11151_consen 4 IVTFFWSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVAN 47 (57)
T ss_pred EehhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHH
Confidence 34566889999999988877777667766666666655444433
No 300
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.95 E-value=1.6e+02 Score=24.00 Aligned_cols=33 Identities=6% Similarity=0.248 Sum_probs=23.4
Q ss_pred hhhhHHHHhHHHHHHHHhhhhccccccchhhhH
Q 009538 126 FNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLG 158 (532)
Q Consensus 126 ~~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~ 158 (532)
++...+.+.+..++|..+|-|+.++++-...|.
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~t 77 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWT 77 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHH
Confidence 556667777788888888888988776443333
No 301
>COG3619 Predicted membrane protein [Function unknown]
Probab=27.67 E-value=5.4e+02 Score=24.46 Aligned_cols=38 Identities=8% Similarity=0.111 Sum_probs=22.7
Q ss_pred hhhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHH
Q 009538 127 NWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMF 165 (532)
Q Consensus 127 ~~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~ 165 (532)
...|....++...|.+.++++...+| .+..|++..+++
T Consensus 171 ~~~~~~~il~f~~GAi~g~ll~~~~g-~~al~~~~~~i~ 208 (226)
T COG3619 171 WLIYLSLILSFIVGAICGALLTLFFG-LKALWVVAALIL 208 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHH
Confidence 34455666777777777777766565 444555554443
No 302
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=26.64 E-value=2.1e+02 Score=25.04 Aligned_cols=39 Identities=13% Similarity=0.215 Sum_probs=28.0
Q ss_pred hhhccccccchhhhHHHHHHHHHHHHHHHhhcceeeecC
Q 009538 144 IVYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSRLYAKVK 182 (532)
Q Consensus 144 ~g~i~~~~gw~~~F~v~~~~~~l~~~~~~~~~~~~~~~~ 182 (532)
-.+-.+++||.|.......+.++..++++-..|+|+.+.
T Consensus 52 lm~~spy~G~~s~~~ftv~fv~m~~~llfDI~P~YrfED 90 (155)
T PF10777_consen 52 LMYYSPYFGLGSVWGFTVFFVVMAAFLLFDIKPRYRFED 90 (155)
T ss_pred HHHhcchhhhHHHHHHHHHHHHHHHHHHhhccceeeecc
Confidence 445567888888877777777777777777888887543
No 303
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=26.15 E-value=37 Score=29.07 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=9.5
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 009538 154 AWGLGIPAFMMFLSCAMF 171 (532)
Q Consensus 154 ~~~F~v~~~~~~l~~~~~ 171 (532)
||++++.+++.++.++++
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 577666555444444433
No 304
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=24.96 E-value=9e+02 Score=26.16 Aligned_cols=63 Identities=11% Similarity=0.030 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 009538 404 WLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLAFVGFAISNYLNGFLISMVHRFTK 466 (532)
Q Consensus 404 ~~i~~~~l~~~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ig~~l~~~~~~~~~~~~~ 466 (532)
.++..+++..+..-..+.+..++-++++.+..=|++|-+.|...++|+.--..+.-++.|...
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 444566777777777788889999999999999999999999999999888888888877643
No 305
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=24.94 E-value=4.7e+02 Score=25.55 Aligned_cols=42 Identities=10% Similarity=0.131 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHHHHhhcceeeecCCCCCchhhHHHHHHHHHHh
Q 009538 156 GLGIPAFMMFLSCAMFFLGSRLYAKVKPEGSPLASTVQVFVAAIKK 201 (532)
Q Consensus 156 ~F~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (532)
.+.++++...+..++++...|. +|..+.+.+..+.+...++.
T Consensus 77 l~~~Gglwy~~lsl~~~~l~p~----r~~rqaLa~~y~~lA~yl~~ 118 (284)
T PF12805_consen 77 LFLAGGLWYLLLSLLWWPLRPY----RPVRQALAECYRALADYLRA 118 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC----CHHHHHHHHHHHHHHHHHHH
Confidence 4445556666666666666665 34444555555544444443
No 306
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=23.35 E-value=2.2e+02 Score=28.92 Aligned_cols=67 Identities=15% Similarity=0.056 Sum_probs=49.0
Q ss_pred HHHHhHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 009538 18 NFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAG 97 (532)
Q Consensus 18 ~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g 97 (532)
....++.+.+..+ +|-|.++.++...+...-. +++. +.+..++-+-.+.|+|++
T Consensus 72 ~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~lyiA-----~Nl~--------------------pr~~tlVPa~~~~G~aa~ 125 (390)
T KOG3097|consen 72 IDSSMFMPLLIRF-LGTKWTMVLAVFPYALYIA-----ANLE--------------------PRYETLVPAGLVLGMAAG 125 (390)
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH-----hhcc--------------------hhHHhhccHHHhhccccc
Confidence 3455566678888 5999999988777665432 2211 357778889999999999
Q ss_pred ccccccccccccC
Q 009538 98 GIRPCNLAFGADQ 110 (532)
Q Consensus 98 ~~~p~~~~~i~d~ 110 (532)
.....--+|++++
T Consensus 126 p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 126 PIWASKGTYLTPM 138 (390)
T ss_pred cccccCcceecHH
Confidence 9988777777765
No 307
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=22.03 E-value=6.7e+02 Score=25.85 Aligned_cols=113 Identities=9% Similarity=0.091 Sum_probs=66.9
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHH----HHH-HHHHhhcccCCCCCCCCCCCCCCCCCC
Q 009538 4 ITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLG----MLV-LSLTAAISKLHPPDCGNQDSGACPGPT 78 (532)
Q Consensus 4 ~~~~~i~~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig----~il-~~~a~~~~~~~~~~~~~~~~~~~~~~~ 78 (532)
-|.+.+++.|.+.+.+++...=++.|.- -.-+-+..=..+-.+| .++ ..|+....
T Consensus 43 lq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~------------------- 102 (508)
T COG4262 43 LQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFALESA------------------- 102 (508)
T ss_pred eehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHhccc-------------------
Confidence 3568899999999999999998888864 2222222222222221 222 24443211
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCCCcccchhhhhhhhHHHHhHHHHHHH
Q 009538 79 PWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISL 141 (532)
Q Consensus 79 ~~~~~~l~~~r~l~G~g~g~~~p~~~~~i~d~f~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 141 (532)
++..+++++-.++|.=.|+-.|....++-....+.+ ....+..+.-|.+.-.|..+=|
T Consensus 103 -~~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~a~~k----~~~s~vl~~DYLGal~~gLl~p 160 (508)
T COG4262 103 -PSRLVLYALTAVIGVLVGAEIPLLMRMLQRRQAKAK----DLGSRVLTLDYLGALAGGLLWP 160 (508)
T ss_pred -hHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH----hhhhhhhhhHhhhhhhHHHHHH
Confidence 356789999999999999999988887766333222 2222345554544444444333
No 308
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=21.42 E-value=1.9e+02 Score=25.37 Aligned_cols=40 Identities=18% Similarity=0.236 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhHHHHHhhccccchHHHHHHHHHHHHHHHH
Q 009538 11 NIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLV 51 (532)
Q Consensus 11 ~~~~~~~~~~~l~~G~laD~~~Grr~~l~~~~~~~~ig~il 51 (532)
.-|.++..+++.+.|++.+|. .+++.+........+|.+.
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~-~~~~~~~~~~~~~~~g~~i 99 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERL-KRSRSFLRLILAMLVGLLI 99 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHH
Confidence 458888999999999999995 7764444333344444333
No 309
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.77 E-value=1.8e+02 Score=23.30 Aligned_cols=50 Identities=10% Similarity=0.147 Sum_probs=27.6
Q ss_pred hhHHHHhHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHHHHHhhcceeee
Q 009538 128 WYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIPAFMMFLSCAMFFLGSRLYAK 180 (532)
Q Consensus 128 ~~~~~~~~G~~~g~~~~g~i~~~~gw~~~F~v~~~~~~l~~~~~~~~~~~~~~ 180 (532)
+++..+.+|+.+|- +-|+..+.++|. +|.+.+.+ .+.++..+...|.|++
T Consensus 27 ~~q~ilti~aiVg~-i~Gf~~Qqls~t-vy~vg~~~-v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 27 FQQLILTIGAIVGF-IYGFAQQQLSVT-VYIVGAGF-VFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHH-HHHHHhcCCCchhhhc
Confidence 45668888999884 456666667653 33333333 2333334444555544
Done!