Query 009539
Match_columns 532
No_of_seqs 424 out of 2903
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 07:29:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009539hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.6E-34 5.5E-39 285.2 28.1 237 249-518 14-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.4E-33 4.9E-38 279.8 14.9 237 248-518 14-276 (296)
3 2dmh_A Myoferlin; beta-sandwic 99.9 6.9E-21 2.4E-25 166.8 15.5 128 251-385 4-134 (140)
4 1wfj_A Putative elicitor-respo 99.9 3E-21 1E-25 168.2 12.2 127 248-386 4-132 (136)
5 3b7y_A E3 ubiquitin-protein li 99.8 2.1E-20 7.2E-25 166.4 15.0 129 250-384 16-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.8 1.6E-20 5.6E-25 161.3 12.7 119 253-382 2-123 (126)
7 2ep6_A MCTP2 protein; beta san 99.8 1.8E-20 6.3E-25 162.6 11.9 126 248-384 7-132 (133)
8 2fk9_A Protein kinase C, ETA t 99.8 9.1E-21 3.1E-25 167.9 9.6 118 250-383 25-156 (157)
9 1gmi_A Protein kinase C, epsil 99.8 2.8E-20 9.4E-25 162.1 11.8 118 252-385 4-134 (136)
10 3m7f_B E3 ubiquitin-protein li 99.8 1.4E-19 4.7E-24 165.0 15.6 130 250-385 4-142 (176)
11 3kwu_A MUNC13-1; calcium bindi 99.8 2.3E-19 7.9E-24 158.7 16.1 122 251-383 14-146 (148)
12 2fk9_A Protein kinase C, ETA t 99.8 1.9E-19 6.5E-24 159.4 13.7 113 409-530 26-156 (157)
13 2dmh_A Myoferlin; beta-sandwic 99.8 6E-19 2E-23 154.4 15.8 120 409-532 4-134 (140)
14 1rlw_A Phospholipase A2, CALB 99.8 3.8E-19 1.3E-23 152.7 14.1 116 411-532 2-126 (126)
15 3pyc_A E3 ubiquitin-protein li 99.8 5.4E-19 1.8E-23 153.1 15.0 125 252-382 3-131 (132)
16 1wfj_A Putative elicitor-respo 99.8 1.6E-18 5.3E-23 151.0 14.2 118 409-532 7-131 (136)
17 2d8k_A Synaptotagmin VII; exoc 99.8 6.9E-19 2.4E-23 154.2 11.9 112 249-360 21-135 (141)
18 2z0u_A WW domain-containing pr 99.8 1.6E-19 5.5E-24 160.5 7.2 111 249-359 38-154 (155)
19 3f04_A Synaptotagmin-1; C2A, c 99.8 8.1E-19 2.8E-23 154.2 11.7 111 249-359 29-141 (143)
20 1rsy_A Synaptotagmin I; calciu 99.8 1.1E-18 3.6E-23 155.1 12.2 111 249-359 37-149 (152)
21 2nq3_A Itchy homolog E3 ubiqui 99.8 1.1E-18 3.9E-23 157.9 11.5 125 251-385 33-162 (173)
22 2b3r_A Phosphatidylinositol-4- 99.8 2.5E-18 8.4E-23 149.2 13.1 108 251-359 17-129 (134)
23 1wfm_A Synaptotagmin XIII; C2 99.8 6.2E-18 2.1E-22 147.5 14.9 121 370-519 9-134 (138)
24 3fbk_A RGS3, RGP3, regulator o 99.8 2.9E-18 9.8E-23 152.5 12.8 124 369-521 9-141 (153)
25 3b7y_A E3 ubiquitin-protein li 99.8 7.2E-18 2.4E-22 149.9 14.8 118 408-531 16-153 (153)
26 3rdl_A Protein kinase C alpha 99.8 2.3E-18 7.7E-23 150.1 11.2 119 371-521 2-128 (137)
27 1ugk_A Synaptotagmin IV, KIAA1 99.8 5.1E-18 1.7E-22 148.1 13.2 111 249-359 17-132 (138)
28 2ep6_A MCTP2 protein; beta san 99.8 5.7E-18 2E-22 146.8 13.4 115 409-531 10-132 (133)
29 3fdw_A Synaptotagmin-like prot 99.8 3.5E-18 1.2E-22 151.0 12.2 120 370-518 6-135 (148)
30 1gmi_A Protein kinase C, epsil 99.8 6.5E-18 2.2E-22 147.0 13.6 113 410-531 4-133 (136)
31 1rsy_A Synaptotagmin I; calciu 99.8 3.3E-18 1.1E-22 151.9 11.9 120 370-518 25-151 (152)
32 1v27_A Regulating synaptic mem 99.8 3.7E-18 1.3E-22 149.5 12.0 122 370-521 4-137 (141)
33 3kwu_A MUNC13-1; calcium bindi 99.8 1.8E-17 6E-22 146.5 16.1 118 409-530 14-146 (148)
34 2d8k_A Synaptotagmin VII; exoc 99.8 6.9E-18 2.4E-22 147.8 13.0 121 370-519 9-137 (141)
35 1a25_A CALB, protein kinase C 99.7 2.3E-18 8E-23 152.4 9.4 121 370-522 16-144 (149)
36 2bwq_A Regulating synaptic mem 99.7 7.5E-18 2.6E-22 145.2 11.9 115 372-516 3-129 (129)
37 3f04_A Synaptotagmin-1; C2A, c 99.7 1E-17 3.5E-22 147.1 12.6 119 370-517 17-142 (143)
38 2chd_A Rabphilin-3A, exophilin 99.7 4.6E-18 1.6E-22 149.1 10.1 111 249-359 24-139 (142)
39 1wfm_A Synaptotagmin XIII; C2 99.7 8.4E-18 2.9E-22 146.7 11.5 109 249-360 21-132 (138)
40 2enp_A B/K protein; C2 type 1, 99.7 4E-18 1.4E-22 150.5 9.6 111 249-359 21-140 (147)
41 2bwq_A Regulating synaptic mem 99.7 5.3E-18 1.8E-22 146.2 10.0 109 249-358 13-128 (129)
42 2enp_A B/K protein; C2 type 1, 99.7 6.1E-18 2.1E-22 149.3 10.6 121 369-518 8-142 (147)
43 3m7f_B E3 ubiquitin-protein li 99.7 2.3E-17 7.9E-22 150.2 14.3 118 409-532 5-142 (176)
44 2dmg_A KIAA1228 protein; beta- 99.7 5.1E-18 1.8E-22 148.8 9.4 111 249-360 19-135 (142)
45 3fdw_A Synaptotagmin-like prot 99.7 3.1E-18 1E-22 151.4 8.0 112 249-360 18-134 (148)
46 2z0u_A WW domain-containing pr 99.7 5E-18 1.7E-22 150.8 9.4 118 370-516 26-154 (155)
47 1a25_A CALB, protein kinase C 99.7 1.6E-17 5.4E-22 147.0 12.1 107 253-360 30-139 (149)
48 2b3r_A Phosphatidylinositol-4- 99.7 2.7E-17 9.4E-22 142.6 13.1 106 411-520 19-133 (134)
49 1rh8_A Piccolo protein; beta-s 99.7 4.4E-18 1.5E-22 149.3 7.7 119 370-519 3-140 (142)
50 3rdl_A Protein kinase C alpha 99.7 1.2E-17 4.1E-22 145.5 10.3 107 253-360 15-124 (137)
51 1v27_A Regulating synaptic mem 99.7 1.2E-17 4E-22 146.3 9.3 111 249-360 16-133 (141)
52 1ugk_A Synaptotagmin IV, KIAA1 99.7 7.6E-17 2.6E-21 140.6 14.2 121 369-518 4-134 (138)
53 3fbk_A RGS3, RGP3, regulator o 99.7 2.6E-17 9E-22 146.2 11.4 111 249-360 22-137 (153)
54 2q3x_A Regulating synaptic mem 99.7 1.5E-17 5.1E-22 150.6 9.9 108 252-360 28-139 (171)
55 1rh8_A Piccolo protein; beta-s 99.7 5.1E-18 1.7E-22 148.8 6.6 108 253-360 17-138 (142)
56 2dmg_A KIAA1228 protein; beta- 99.7 1.2E-17 4.1E-22 146.5 8.9 121 369-519 6-137 (142)
57 2cm5_A Rabphilin-3A; protein t 99.7 1.5E-17 5.1E-22 149.9 9.1 106 369-503 19-133 (166)
58 3pyc_A E3 ubiquitin-protein li 99.7 1.3E-16 4.3E-21 138.1 14.4 114 410-530 3-132 (132)
59 1tjx_A Similar to synaptotagmi 99.7 7.5E-17 2.6E-21 144.3 13.3 121 369-518 7-148 (159)
60 1w15_A Synaptotagmin IV; metal 99.7 1.9E-17 6.6E-22 147.1 9.3 118 370-518 13-139 (153)
61 2chd_A Rabphilin-3A, exophilin 99.7 3.8E-17 1.3E-21 143.3 11.0 120 369-517 11-140 (142)
62 2r83_A Synaptotagmin-1; C2A-C2 99.7 1.6E-16 5.3E-21 156.2 16.3 132 371-531 3-147 (284)
63 2cjt_A UNC-13 homolog A, MUNC1 99.7 7.6E-17 2.6E-21 139.0 11.7 89 251-349 2-91 (131)
64 1tjx_A Similar to synaptotagmi 99.7 7.3E-17 2.5E-21 144.3 11.8 111 249-359 20-146 (159)
65 3n5a_A Synaptotagmin-7; calciu 99.7 5.3E-17 1.8E-21 141.5 10.0 99 249-347 11-113 (138)
66 2q3x_A Regulating synaptic mem 99.7 1E-16 3.5E-21 145.1 12.0 116 370-518 15-140 (171)
67 2nq3_A Itchy homolog E3 ubiqui 99.7 1.6E-16 5.4E-21 143.8 13.0 115 410-531 34-161 (173)
68 3n5a_A Synaptotagmin-7; calciu 99.7 1.5E-16 5E-21 138.7 12.1 115 373-518 2-125 (138)
69 2cm5_A Rabphilin-3A; protein t 99.7 1.7E-16 5.8E-21 143.0 12.8 99 249-347 32-134 (166)
70 1w15_A Synaptotagmin IV; metal 99.7 8.4E-17 2.9E-21 143.0 8.3 97 249-345 25-125 (153)
71 3l9b_A Otoferlin; C2-domain, b 99.6 3.7E-16 1.3E-20 132.7 9.6 119 253-385 20-141 (144)
72 3jzy_A Intersectin 2; C2 domai 99.6 5.2E-16 1.8E-20 165.3 11.1 121 251-384 384-508 (510)
73 1dqv_A Synaptotagmin III; beta 99.6 1.6E-15 5.5E-20 149.9 13.0 133 370-531 3-149 (296)
74 3l9b_A Otoferlin; C2-domain, b 99.6 4.5E-15 1.5E-19 126.0 13.4 116 411-532 20-141 (144)
75 2cjs_A UNC-13 homolog A, MUNC1 99.6 2.5E-15 8.6E-20 134.8 11.8 89 251-349 11-100 (167)
76 3nsj_A Perforin-1; pore formin 99.6 3.4E-15 1.2E-19 157.4 14.1 114 249-383 389-503 (540)
77 1djx_A PLC-D1, phosphoinositid 99.6 1.9E-14 6.5E-19 155.1 17.4 147 228-383 466-623 (624)
78 2cjt_A UNC-13 homolog A, MUNC1 99.6 2E-14 6.9E-19 123.7 13.7 111 410-529 3-130 (131)
79 3jzy_A Intersectin 2; C2 domai 99.6 1.4E-14 4.7E-19 154.3 14.8 117 409-530 384-507 (510)
80 1cjy_A CPLA2, protein (cytosol 99.6 3.6E-15 1.2E-19 161.9 9.9 108 251-359 15-125 (749)
81 2cjs_A UNC-13 homolog A, MUNC1 99.5 5.5E-14 1.9E-18 126.1 12.5 87 411-506 13-100 (167)
82 3nsj_A Perforin-1; pore formin 99.5 1.7E-13 5.9E-18 144.4 15.3 110 410-530 392-503 (540)
83 3bxj_A RAS GTPase-activating p 99.4 1.8E-14 6E-19 151.5 0.6 127 252-386 9-159 (483)
84 1cjy_A CPLA2, protein (cytosol 99.4 8.7E-13 3E-17 143.3 11.8 109 409-525 15-132 (749)
85 3bxj_A RAS GTPase-activating p 99.4 5.8E-14 2E-18 147.5 -0.0 117 410-531 9-157 (483)
86 1djx_A PLC-D1, phosphoinositid 99.4 5.9E-12 2E-16 135.7 15.0 114 409-530 494-623 (624)
87 3ohm_B 1-phosphatidylinositol- 99.3 3.9E-11 1.3E-15 132.4 16.0 144 228-387 694-848 (885)
88 2zkm_X 1-phosphatidylinositol- 99.3 3.9E-11 1.3E-15 132.5 15.7 139 228-383 647-798 (799)
89 3pfq_A PKC-B, PKC-beta, protei 99.2 7.7E-12 2.6E-16 137.3 8.9 107 253-360 171-280 (674)
90 3pfq_A PKC-B, PKC-beta, protei 99.2 4.5E-11 1.5E-15 131.2 12.7 104 411-519 171-282 (674)
91 3qr0_A Phospholipase C-beta (P 99.2 9.9E-11 3.4E-15 128.6 15.0 144 228-387 619-774 (816)
92 1yrk_A NPKC-delta, protein kin 99.0 2.5E-09 8.5E-14 88.0 12.1 114 252-383 4-124 (126)
93 3qr0_A Phospholipase C-beta (P 99.0 3.4E-09 1.1E-13 116.5 14.7 107 411-530 649-770 (816)
94 2enj_A NPKC-theta, protein kin 99.0 3.4E-09 1.2E-13 88.3 11.0 114 252-383 8-129 (138)
95 2zkm_X 1-phosphatidylinositol- 99.0 3.5E-09 1.2E-13 116.9 14.2 108 410-530 676-798 (799)
96 1yrk_A NPKC-delta, protein kin 99.0 2.5E-08 8.5E-13 82.1 15.5 108 410-530 4-124 (126)
97 3ohm_B 1-phosphatidylinositol- 98.9 3.8E-09 1.3E-13 116.7 13.1 107 411-530 724-844 (885)
98 2enj_A NPKC-theta, protein kin 98.9 2.4E-08 8.1E-13 83.3 13.9 108 410-530 8-129 (138)
99 3l4c_A Dedicator of cytokinesi 93.5 2.1 7.2E-05 38.8 14.4 57 289-345 77-139 (220)
100 2yrb_A Protein fantom; beta sa 92.2 1.7 5.9E-05 37.1 11.4 129 249-385 13-151 (156)
101 2yrb_A Protein fantom; beta sa 92.0 1.9 6.4E-05 36.9 11.3 116 409-531 15-150 (156)
102 2wxf_A Phosphatidylinositol-4, 91.4 1.8 6.3E-05 48.2 13.7 92 253-347 216-325 (940)
103 3hhm_A Phosphatidylinositol-4, 91.0 2 6.9E-05 48.4 13.4 93 253-347 354-456 (1091)
104 2wxf_A Phosphatidylinositol-4, 87.5 1.7 5.9E-05 48.5 9.6 94 411-504 216-325 (940)
105 1e7u_A Phosphatidylinositol 3- 84.6 4 0.00014 45.6 10.6 106 254-360 218-345 (961)
106 3hhm_A Phosphatidylinositol-4, 78.7 5 0.00017 45.3 8.6 93 411-504 354-456 (1091)
107 2y3a_A Phosphatidylinositol-4, 78.3 5.5 0.00019 45.1 8.9 72 253-327 352-429 (1092)
108 2y3a_A Phosphatidylinositol-4, 77.8 3.2 0.00011 46.9 6.8 94 411-504 352-471 (1092)
109 1e7u_A Phosphatidylinositol 3- 76.4 7.6 0.00026 43.4 9.2 95 411-505 217-332 (961)
110 3l4c_A Dedicator of cytokinesi 66.0 20 0.00068 32.4 7.9 61 442-502 78-139 (220)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.6e-34 Score=285.23 Aligned_cols=237 Identities=26% Similarity=0.426 Sum_probs=198.3
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCC--CCCEEEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYD 326 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d 326 (532)
+....|.|.|+|++|++|+.+|..|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 4456789999999999999999999999999999987554567999999999999999999998643 35799999999
Q ss_pred ccCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEEccCCCCCcccccccccccCCCC
Q 009539 327 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPEN 406 (532)
Q Consensus 327 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (532)
+|..++|++||++.++|.++..+.....|++|..... ......|+|++++.|.|.
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~----~~~~~~G~i~l~l~~~p~--------------------- 148 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK----EEQEKLGDICFSLRYVPT--------------------- 148 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS----CCCCCCCEEEEEEEEETT---------------------
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeecccc----ccccccccEEEEEEecCc---------------------
Confidence 9999999999999999999998888888998854211 124568999999999852
Q ss_pred CCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEc--C---eeEEEeeecCCCCCcccceEEEEecCCCC-CCeEEEEE
Q 009539 407 TPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR--G---EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEV 477 (532)
Q Consensus 407 ~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~--~---~~~kT~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V 477 (532)
.+.|.|.|++|+||+.. +.+||||++++. + .+++|++++++.||+|||.|.|.+..... ...|.|+|
T Consensus 149 ----~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 224 (284)
T 2r83_A 149 ----AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 224 (284)
T ss_dssp ----TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEE
T ss_pred ----CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEE
Confidence 67999999999999863 679999999984 2 34699999999999999999999975422 23799999
Q ss_pred EEccccccCCCCCceeEEEEEechhh----------hc--cceeceEEEeCCC
Q 009539 478 CSVSSRIGLLHPKETLGYIDINLSDV----------VS--NKRINEKYHLIDS 518 (532)
Q Consensus 478 ~d~~~~~~~~~~d~~lG~~~i~L~~l----------~~--~~~~~~~~~L~~~ 518 (532)
||++. ++.+++||++.++++.+ +. +....+||+|...
T Consensus 225 ~d~d~----~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 225 LDYDK----IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EECCS----SSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred EeCCC----CCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99986 67899999999999752 22 3456799999754
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=1.4e-33 Score=279.84 Aligned_cols=237 Identities=27% Similarity=0.461 Sum_probs=190.2
Q ss_pred cCCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCC--CCEEEEEEE
Q 009539 248 AYRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAVY 325 (532)
Q Consensus 248 ~~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~v~ 325 (532)
.+....+.|.|+|++|++|+.+|..|.+||||++++.+.....++|+++++++||+|||+|.|.+.... ...|+|+||
T Consensus 14 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~ 93 (296)
T 1dqv_A 14 RYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93 (296)
T ss_dssp ECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEE
T ss_pred EEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEE
Confidence 355677899999999999999999999999999999644344579999999999999999999986432 458999999
Q ss_pred EccCCCCCCeeEEEEEe-CccCCC-CCCeEEEEecccccccCCCCCCccccEEEEEEEEEEccCCCCCcccccccccccC
Q 009539 326 DWEQVGKHDKMGMNVVP-LKELTP-EEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKA 403 (532)
Q Consensus 326 d~d~~~~d~~iG~~~i~-l~~l~~-~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~ 403 (532)
|+|.+++|++||++.++ +.++.. ......|++|... .......|+|++++.|.|.
T Consensus 94 d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~-----~~~~~~~G~i~vsl~y~~~------------------ 150 (296)
T 1dqv_A 94 DFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG-----GSEKADLGELNFSLCYLPT------------------ 150 (296)
T ss_dssp ECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC-----SSCCSCCCEEEEEEEEETT------------------
T ss_pred EcCCCCCCceEEEEEeccccccccCCccceeeeccccc-----cccccccceEEEEEEeccc------------------
Confidence 99999999999999996 444433 2334456666331 1134568999999999752
Q ss_pred CCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEc--C---eeEEEeeecCCCCCcccceEEEEecCCCC-CCeEE
Q 009539 404 PENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR--G---EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLH 474 (532)
Q Consensus 404 ~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~--~---~~~kT~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~ 474 (532)
.|.|.|+|++|+||+.. +.+||||++++. + +++||++++++.||+|||.|.|.+..... ...|.
T Consensus 151 -------~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 223 (296)
T 1dqv_A 151 -------AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLS 223 (296)
T ss_dssp -------TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCC
T ss_pred -------cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEE
Confidence 68999999999999863 578999999996 3 45799999999999999999999875422 23799
Q ss_pred EEEEEccccccCCCCCceeEEEEEechhhhc-------------cceeceEEEeCCC
Q 009539 475 VEVCSVSSRIGLLHPKETLGYIDINLSDVVS-------------NKRINEKYHLIDS 518 (532)
Q Consensus 475 v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~-------------~~~~~~~~~L~~~ 518 (532)
|+|||++. ++++++||++.++++++.. ++...+|+.|...
T Consensus 224 i~V~d~d~----~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 224 IAVVDYDC----IGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CEEEECCS----SSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred EEEEeCCC----CCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 99999986 6789999999999987643 2345677777654
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=6.9e-21 Score=166.84 Aligned_cols=128 Identities=29% Similarity=0.485 Sum_probs=109.7
Q ss_pred CCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCC---CCCEEEEEEEEc
Q 009539 251 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP---ESQAVELAVYDW 327 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~---~~~~L~v~v~d~ 327 (532)
...|.|.|+|++|++|+..+. |.+||||++++++++ ++|++++++.||+|||+|.|.+..+ ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~---~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEK---KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCE---EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEe---EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 457899999999999999998 999999999998754 6999999999999999999999754 368999999999
Q ss_pred cCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEEc
Q 009539 328 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 385 (532)
Q Consensus 328 d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 385 (532)
|..++|++||++.+++.++..+.....|+++.+.... .+....|+|+++++|.|.
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~---~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE---KGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT---TCCEEEEEEEEEEEECCC
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC---CCCCCCCEEEEEEEEECC
Confidence 9999999999999999999988877888874332221 124567999999999985
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.85 E-value=3e-21 Score=168.25 Aligned_cols=127 Identities=28% Similarity=0.515 Sum_probs=110.8
Q ss_pred cCCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeC-CCCCceeecEEEEEeeCCCCCEEEEEEEE
Q 009539 248 AYRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPESQAVELAVYD 326 (532)
Q Consensus 248 ~~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~v~d 326 (532)
....+.|.|+|+|++|++|+..+..|.+||||+++++++. .+|++++ ++.||+|||+|.|.+.+ ....|+|+|||
T Consensus 4 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d 79 (136)
T 1wfj_A 4 GSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD---QKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFD 79 (136)
T ss_dssp CCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE---EECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECC
T ss_pred CCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc---ceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEE
Confidence 3456899999999999999999988999999999998764 4899998 89999999999999987 56899999999
Q ss_pred ccCCCCCCeeEEEEEeCccCC-CCCCeEEEEecccccccCCCCCCccccEEEEEEEEEEcc
Q 009539 327 WEQVGKHDKMGMNVVPLKELT-PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFK 386 (532)
Q Consensus 327 ~d~~~~d~~iG~~~i~l~~l~-~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~ 386 (532)
++.+++|++||++.+++.++. .+.....|++|.+ +.+..|+|+++++|.|..
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~--------~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK--------DEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE--------TTEEEEEEEEEEEEEECC
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec--------CCccCEEEEEEEEEEeCC
Confidence 999999999999999999994 4444567887752 367899999999999964
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=2.1e-20 Score=166.37 Aligned_cols=129 Identities=34% Similarity=0.582 Sum_probs=102.8
Q ss_pred CCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc---CCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEE
Q 009539 250 RRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK---LPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYD 326 (532)
Q Consensus 250 ~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~---~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d 326 (532)
....+.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 45789999999999999999988999999999998532 2356999999999999999999999764 5799999999
Q ss_pred ccCCCCCCeeEEEEEeCccCCCCCCe------EEEEecccccccCCCCCCccccEEEEEEEEEE
Q 009539 327 WEQVGKHDKMGMNVVPLKELTPEEPS------VKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKP 384 (532)
Q Consensus 327 ~d~~~~d~~iG~~~i~l~~l~~~~~~------~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p 384 (532)
++..++|++||++.+++.++..+... ..|+.|.... ......|+|+++++|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-----TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc-----CCCCcceEEEEEEEEeC
Confidence 99999999999999999999876543 4788774321 13467899999999976
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1.6e-20 Score=161.31 Aligned_cols=119 Identities=22% Similarity=0.368 Sum_probs=102.5
Q ss_pred eEEEEEEEEEcCCCCcC---CCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEccC
Q 009539 253 VGILHVKVVKAMNLKKK---DLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQ 329 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 329 (532)
.|.|.|+|++|++|+.+ +..|.+||||++++++.....++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 666899999999998754456799999999999999999999976667899999999998
Q ss_pred CCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEE
Q 009539 330 VGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIY 382 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~ 382 (532)
. +|++||++.++|.++..+.....|++|. ....|+|+++++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~----------~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFN----------QVTEMVLEMSLEV 123 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEET----------TTEEEEEEEEEEC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcC----------CCceEEEEEEEEe
Confidence 7 4999999999999999888888999882 3456777777653
No 7
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=1.8e-20 Score=162.59 Aligned_cols=126 Identities=30% Similarity=0.477 Sum_probs=108.3
Q ss_pred cCCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEc
Q 009539 248 AYRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDW 327 (532)
Q Consensus 248 ~~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~ 327 (532)
.+..+.|.|+|+|++|++|+..+..|.+||||+++++++. .+|++++++.||+|||+|.|.+.+. .+.|.|+|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR---LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE---EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE---EEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4667899999999999999999999999999999998754 5999999999999999999999865 57899999999
Q ss_pred cCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEE
Q 009539 328 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKP 384 (532)
Q Consensus 328 d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p 384 (532)
|..++|++||++.+++.++..+. ..|++|.... ......|+|+++++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~-----~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKD-----LEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSC-----TTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCC-----CCCccceEEEEEEEEEe
Confidence 99889999999999999997754 4677764321 12468899999999864
No 8
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.83 E-value=9.1e-21 Score=167.95 Aligned_cols=118 Identities=24% Similarity=0.356 Sum_probs=101.8
Q ss_pred CCCeEEEEEEEEEcCCCCcCCC----------CCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCE
Q 009539 250 RRPVGILHVKVVKAMNLKKKDL----------LGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQA 319 (532)
Q Consensus 250 ~~~~g~L~V~v~~A~~L~~~d~----------~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~ 319 (532)
....|.|+|+|++|++|+++|. .|.+||||++++++++ ..+|+++++|+||+|||+|.|.+.+ .+.
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~--~~kT~v~~ktlnP~WNE~F~f~v~~--~~~ 100 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVR--VGQTSTKQKTNKPTYNEEFCANVTD--GGH 100 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEE--ECE
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEe--eEEeeecCCCCCCccCcEEEEEcCC--CCE
Confidence 3568999999999999998873 2679999999998654 3589999999999999999999975 468
Q ss_pred EEEEEEEccCCCCCCeeEEEEEeCccCCCC----CCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009539 320 VELAVYDWEQVGKHDKMGMNVVPLKELTPE----EPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 383 (532)
Q Consensus 320 L~v~v~d~d~~~~d~~iG~~~i~l~~l~~~----~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 383 (532)
|.|+|||+|.+++|++||++.++++++..+ ...+.|++|. ..|+|+++++|.
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------SSCEEEEEEEEC
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------CCcEEEEEEEEE
Confidence 999999999999999999999999998754 5678898871 389999999874
No 9
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.83 E-value=2.8e-20 Score=162.13 Aligned_cols=118 Identities=25% Similarity=0.399 Sum_probs=101.3
Q ss_pred CeEEEEEEEEEcCCCCcCCCCCC-----------CCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEE
Q 009539 252 PVGILHVKVVKAMNLKKKDLLGA-----------SDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAV 320 (532)
Q Consensus 252 ~~g~L~V~v~~A~~L~~~d~~g~-----------~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L 320 (532)
..|.|+|+|++|++|++.|..++ +||||++++++.. ..+|+++.+|.||+|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR--IGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE--eeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46899999999999998886554 9999999997543 35899999999999999999999764 899
Q ss_pred EEEEEEccCCCCCCeeEEEEEeCccCCCCC--CeEEEEecccccccCCCCCCccccEEEEEEEEEEc
Q 009539 321 ELAVYDWEQVGKHDKMGMNVVPLKELTPEE--PSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 385 (532)
Q Consensus 321 ~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~--~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 385 (532)
.|+|||+|..++|++||++.+++.++..+. ..+.|+++ ...|+|+++++|.+.
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L------------~~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL------------EPEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC------------BSSCEEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc------------CCCeEEEEEEEEEec
Confidence 999999999999999999999999998753 23678765 248999999999863
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.4e-19 Score=164.98 Aligned_cols=130 Identities=33% Similarity=0.544 Sum_probs=101.0
Q ss_pred CCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcC---CceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEE
Q 009539 250 RRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKL---PSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYD 326 (532)
Q Consensus 250 ~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~---~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d 326 (532)
....|.|+|+|++|++|+.++..|++||||++++.+... ..++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d 82 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFD 82 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEE
Confidence 346899999999999999999999999999999986432 346999999999999999999999753 5799999999
Q ss_pred ccCCCCCCeeEEEEEeCccCCCCCCe-E-----EEEecccccccCCCCCCccccEEEEEEEEEEc
Q 009539 327 WEQVGKHDKMGMNVVPLKELTPEEPS-V-----KTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 385 (532)
Q Consensus 327 ~d~~~~d~~iG~~~i~l~~l~~~~~~-~-----~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 385 (532)
++.+++|++||++.++|.++..+... + .|+.|.... ...+..|+|+++++|.|.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS-----TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC-----CCCccCEEEEEEEEEEeC
Confidence 99999999999999999999876433 1 577764321 135578999999999997
No 11
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=2.3e-19 Score=158.67 Aligned_cols=122 Identities=25% Similarity=0.430 Sum_probs=103.7
Q ss_pred CCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEccCC
Q 009539 251 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQV 330 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~ 330 (532)
...|.|+|+|++|++|+..|..|.+||||+++++++. ++|++++++.||+|||+|.|.+..+ .+.|.++|||+|..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~ 89 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK---KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDD 89 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCS
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE---EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCC
Confidence 3579999999999999999999999999999997543 5999999999999999999999775 47999999999975
Q ss_pred -----------CCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009539 331 -----------GKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 383 (532)
Q Consensus 331 -----------~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 383 (532)
++|++||++.+++.++. .....|++|.+. .......|+|+++++|.
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~-----~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKR-----TDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCS-----STTCCCCCEEEEEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccC-----CCCCCCceEEEEEEEEE
Confidence 78999999999999994 345678877432 11245789999999985
No 12
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.81 E-value=1.9e-19 Score=159.45 Aligned_cols=113 Identities=16% Similarity=0.255 Sum_probs=99.8
Q ss_pred CCceEEEEEEeeeecCCCC-------------CCCCCEEEEEEcCee-EEEeeecCCCCCcccceEEEEecCCCCCCeEE
Q 009539 409 AGGGLLVVIVHEAQDVEGK-------------HHTNPYARILFRGEE-RKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLH 474 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~-------------~~~dpyv~v~~~~~~-~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~ 474 (532)
...|.|+|+|++|+||+.. +.+||||++++++++ .||+++++|.||+|||.|+|.+.+. ..|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~---~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG---GHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC---CEEE
Confidence 4589999999999999853 358999999998876 5999999999999999999999753 5899
Q ss_pred EEEEEccccccCCCCCceeEEEEEechhhhcc----ceeceEEEeCCCCCeEEEEEEEEE
Q 009539 475 VEVCSVSSRIGLLHPKETLGYIDINLSDVVSN----KRINEKYHLIDSKNGRIQIELQWR 530 (532)
Q Consensus 475 v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~----~~~~~~~~L~~~~~G~i~l~~~w~ 530 (532)
++|||++. ++.|++||++.|+|+++..+ ...+.||+|.. +|+|+|+++|.
T Consensus 103 ~~V~D~d~----~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETP----LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp EEEEECCS----SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred EEEEECCC----CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 99999875 67899999999999999876 56789999964 89999999985
No 13
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=6e-19 Score=154.43 Aligned_cols=120 Identities=23% Similarity=0.485 Sum_probs=104.6
Q ss_pred CCceEEEEEEeeeecCCCC--CCCCCEEEEEEcCeeEEEeeecCCCCCcccceEEEEecCCC--CCCeEEEEEEEccccc
Q 009539 409 AGGGLLVVIVHEAQDVEGK--HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPP--TNDRLHVEVCSVSSRI 484 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~--~~~dpyv~v~~~~~~~kT~vv~~t~nP~w~e~f~f~v~~~~--~~~~l~v~V~d~~~~~ 484 (532)
...|.|.|+|++|+||+.. +.+||||++++++++++|++++++.||+|||.|+|.+.... ....|.|+|||++.
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~-- 81 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET-- 81 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC--
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC--
Confidence 3578999999999999864 58999999999999999999999999999999999997542 24689999999986
Q ss_pred cCCCCCceeEEEEEechhhhccceeceEEE---eCCCC----CeEEEEEEEEEeC
Q 009539 485 GLLHPKETLGYIDINLSDVVSNKRINEKYH---LIDSK----NGRIQIELQWRTA 532 (532)
Q Consensus 485 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~---L~~~~----~G~i~l~~~w~p~ 532 (532)
++.|++||++.++|.++..+.....||+ |.+.. .|+|+++++|.|.
T Consensus 82 --~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 82 --IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp --SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred --CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 5789999999999999988777788988 65532 4999999999984
No 14
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=3.8e-19 Score=152.70 Aligned_cols=116 Identities=18% Similarity=0.406 Sum_probs=102.5
Q ss_pred ceEEEEEEeeeecCCCC------CCCCCEEEEEEcC---eeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcc
Q 009539 411 GGLLVVIVHEAQDVEGK------HHTNPYARILFRG---EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVS 481 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~------~~~dpyv~v~~~~---~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~ 481 (532)
.|.|.|+|++|++|+.. +.+||||++++++ +.+||++++++.||+|||.|.|.+... ....|.++|||++
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCC-CCCEEEEEEEECC
Confidence 68999999999999962 6899999999986 678999999999999999999999654 4568999999998
Q ss_pred ccccCCCCCceeEEEEEechhhhccceeceEEEeCCCCCeEEEEEEEEEeC
Q 009539 482 SRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNGRIQIELQWRTA 532 (532)
Q Consensus 482 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l~~~w~p~ 532 (532)
. + +|++||++.++|+++..+.....||+|...+.|.|+++++..|+
T Consensus 81 ~----~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~~~ 126 (126)
T 1rlw_A 81 Y----V-MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVASS 126 (126)
T ss_dssp S----S-CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECCCC
T ss_pred C----C-CCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeCCC
Confidence 5 3 48899999999999988888889999998778999999887663
No 15
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.80 E-value=5.4e-19 Score=153.09 Aligned_cols=125 Identities=23% Similarity=0.439 Sum_probs=101.0
Q ss_pred CeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEccCCC
Q 009539 252 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQVG 331 (532)
Q Consensus 252 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~~ 331 (532)
....|+|+|++|++|+.+|..|.+||||++++++.. ..++|+++++|+||+|||+|.|.+... +.|.|+|||+|..+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCC
Confidence 456899999999999999999999999999997643 457999999999999999999999765 45999999999887
Q ss_pred C---CCeeEEEEEeCccCC-CCCCeEEEEecccccccCCCCCCccccEEEEEEEE
Q 009539 332 K---HDKMGMNVVPLKELT-PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIY 382 (532)
Q Consensus 332 ~---d~~iG~~~i~l~~l~-~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~ 382 (532)
+ |++||++.+++.++. .......+++|... .+ .......|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~-~~--~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL-NP--SDTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS-ST--TCCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeec-CC--CCCCceeEEEEEEEEc
Confidence 6 899999999999883 23334466776432 11 1224679999999875
No 16
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=1.6e-18 Score=150.98 Aligned_cols=118 Identities=20% Similarity=0.420 Sum_probs=103.1
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCCEEEEEEcCeeEEEeeec-CCCCCcccceEEEEecCCCCCCeEEEEEEEccccc
Q 009539 409 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRI 484 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~~~~kT~vv~-~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~ 484 (532)
...|.|.|+|++|++|+.. +.+||||++++++++++|++++ ++.||+|||+|+|.+.+ ....|.|+|||++.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~--~~~~l~~~V~d~~~-- 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE--GTTELKAKIFDKDV-- 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES--SCCEEEEEECCSSS--
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC--CCCEEEEEEEECCC--
Confidence 4689999999999999874 5799999999999999999998 89999999999999986 35689999999985
Q ss_pred cCCCCCceeEEEEEechhhhc-cceeceEEEeCC--CCCeEEEEEEEEEeC
Q 009539 485 GLLHPKETLGYIDINLSDVVS-NKRINEKYHLID--SKNGRIQIELQWRTA 532 (532)
Q Consensus 485 ~~~~~d~~lG~~~i~L~~l~~-~~~~~~~~~L~~--~~~G~i~l~~~w~p~ 532 (532)
+++|++||++.++|.++.. .....+||+|.. ...|+|+++++|.|.
T Consensus 83 --~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 --GTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp --CTTTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred --CCCCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeC
Confidence 6789999999999999965 445678999962 236999999999984
No 17
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=6.9e-19 Score=154.24 Aligned_cols=112 Identities=34% Similarity=0.508 Sum_probs=98.1
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeC---CCCCEEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELAVY 325 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~v~ 325 (532)
+....+.|+|+|++|++|+.++..|.+||||++++.+.....++|++++++.||+|||+|.|.+.. .....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 444678999999999999999989999999999997654456799999999999999999998532 23578999999
Q ss_pred EccCCCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 326 DWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 326 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
|++..++|++||++.+++.++..+.....|++|.+
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred ECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999999999999999999998888889998854
No 18
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=1.6e-19 Score=160.52 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=95.2
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeC---CcCCceeeEeeCCCCCceeecEEEEEeeCC--CCCEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITE---DKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELA 323 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~---~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~ 323 (532)
+....+.|+|+|++|+||+.+|..|.+||||++++.+ .....+||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 3445689999999999999999999999999999986 222357999999999999999999998642 25689999
Q ss_pred EEEccCCCCCCeeEEEEEeCccCCC-CCCeEEEEecc
Q 009539 324 VYDWEQVGKHDKMGMNVVPLKELTP-EEPSVKTLDLL 359 (532)
Q Consensus 324 v~d~d~~~~d~~iG~~~i~l~~l~~-~~~~~~~l~l~ 359 (532)
|||+|..+++++||++.++|.++.. +.....|++|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999999999999999999964 56677888763
No 19
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.78 E-value=8.1e-19 Score=154.20 Aligned_cols=111 Identities=33% Similarity=0.498 Sum_probs=98.7
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCC--CCCEEEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYD 326 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d 326 (532)
+....+.|.|+|++|++|+..+..|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 4456789999999999999999889999999999976554567999999999999999999998643 35799999999
Q ss_pred ccCCCCCCeeEEEEEeCccCCCCCCeEEEEecc
Q 009539 327 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 359 (532)
Q Consensus 327 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~ 359 (532)
++..++|++||++.++|.++..+.....|++|.
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 999999999999999999999988888999874
No 20
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.1e-18 Score=155.12 Aligned_cols=111 Identities=33% Similarity=0.498 Sum_probs=98.3
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCC--CCCEEEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYD 326 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d 326 (532)
+....+.|.|+|++|++|+..+..|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 4456789999999999999999889999999999976544567999999999999999999988642 35799999999
Q ss_pred ccCCCCCCeeEEEEEeCccCCCCCCeEEEEecc
Q 009539 327 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 359 (532)
Q Consensus 327 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~ 359 (532)
++..++|++||++.+++.++..+.....|++|.
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 999999999999999999998888888999874
No 21
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.1e-18 Score=157.88 Aligned_cols=125 Identities=18% Similarity=0.252 Sum_probs=102.4
Q ss_pred CCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEccCC
Q 009539 251 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQV 330 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~ 330 (532)
...+.|+|+|++|++|+..+..+.+||||++++++ ..++|+++++|+||+|||+|.|.+.. .+.|.|+|||+|.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~---~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG---QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT---EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECC---EEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCC
Confidence 35789999999999999444445699999999987 34699999999999999999999853 78999999999999
Q ss_pred CCCCeeEEEEEeCccCCCCC-----CeEEEEecccccccCCCCCCccccEEEEEEEEEEc
Q 009539 331 GKHDKMGMNVVPLKELTPEE-----PSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 385 (532)
Q Consensus 331 ~~d~~iG~~~i~l~~l~~~~-----~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 385 (532)
++|++||++.+++.++..+. ....|++|... ..+....|+|+++++|.+.
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-----~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-----KEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-----SCTTSEEEEEEEEEESEEC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC-----CCCCcccEEEEEEEeeeec
Confidence 99999999999999986432 12567777542 1135678999999999987
No 22
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.77 E-value=2.5e-18 Score=149.25 Aligned_cols=108 Identities=25% Similarity=0.364 Sum_probs=94.3
Q ss_pred CCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCC--cCCceeeEeeCCCCCceeecEEEEE-eeCC--CCCEEEEEEE
Q 009539 251 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFT-VRDP--ESQAVELAVY 325 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~Wne~f~f~-v~~~--~~~~L~v~v~ 325 (532)
...+.|.|+|++|++|+. +..|.+||||++++.+. ....++|+++++|.||+|||+|.|. +... ....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 356899999999999997 77789999999999543 3446799999999999999999999 7532 4579999999
Q ss_pred EccCCCCCCeeEEEEEeCccCCCCCCeEEEEecc
Q 009539 326 DWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 359 (532)
Q Consensus 326 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~ 359 (532)
|+|..+++++||++.++|.++..+.....|++|.
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 9999999999999999999999888888999884
No 23
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=6.2e-18 Score=147.51 Aligned_cols=121 Identities=17% Similarity=0.140 Sum_probs=102.4
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCCCCCCCEEEEEEc---Ce-eEEE
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGKHHTNPYARILFR---GE-ERKT 445 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~~~~dpyv~v~~~---~~-~~kT 445 (532)
....|+|++++.|.+ ..+.|.|+|++|++....+.+||||++++. ++ .+||
T Consensus 9 ~~~~G~l~~sl~y~~-------------------------~~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~~~~~~kT 63 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDC-------------------------QKAELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQT 63 (138)
T ss_dssp CSSCCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEEC
T ss_pred CCcceEEEEEEEEeC-------------------------CCCEEEEEEEEEEcCCCCCCcceEEEEEEEcCCCcccEec
Confidence 457899999999985 378999999999976666889999999994 22 4699
Q ss_pred eeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCCC
Q 009539 446 KHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK 519 (532)
Q Consensus 446 ~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 519 (532)
++++++.||+|||+|.|.+..... ...|.++|||++. +++|++||++.++|.++.......+||+|....
T Consensus 64 ~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~----~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 64 ALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR----FSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS----SCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred ccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC----CCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 999999999999999999875422 3589999999986 678999999999999987666678999998653
No 24
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.76 E-value=2.9e-18 Score=152.48 Aligned_cols=124 Identities=23% Similarity=0.389 Sum_probs=101.8
Q ss_pred CCccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC--CCCCCEEEEEEcC-----e
Q 009539 369 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK--HHTNPYARILFRG-----E 441 (532)
Q Consensus 369 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~--~~~dpyv~v~~~~-----~ 441 (532)
.....|++.++++|.+. .+.|.|+|++|+||+.. +.+||||++++.. .
T Consensus 9 ~~~~~G~~~lsL~y~~~-------------------------~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~ 63 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDAQ-------------------------DRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLR 63 (153)
T ss_dssp ----CCCCEEEEEEEES-------------------------SSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTT
T ss_pred ccCCCCEEEEEEEEECC-------------------------CCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCcc
Confidence 36789999999999974 78999999999999864 6799999999943 4
Q ss_pred eEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccccccCCCC-CceeEEEEEechhhhc-cceeceEEEeCCCC
Q 009539 442 ERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHP-KETLGYIDINLSDVVS-NKRINEKYHLIDSK 519 (532)
Q Consensus 442 ~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~~-d~~lG~~~i~L~~l~~-~~~~~~~~~L~~~~ 519 (532)
+++|++++++.||+|||+|.|.+........|.|+|||++. ++. |++||++.++|+++.. +....+||+|....
T Consensus 64 ~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~----~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 64 HQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS----QSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp CEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS----SGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred EEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC----CCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 57999999999999999999999543344579999999985 455 8999999999999985 66778999998765
Q ss_pred Ce
Q 009539 520 NG 521 (532)
Q Consensus 520 ~G 521 (532)
.|
T Consensus 140 ~g 141 (153)
T 3fbk_A 140 LG 141 (153)
T ss_dssp GG
T ss_pred hc
Confidence 43
No 25
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.76 E-value=7.2e-18 Score=149.91 Aligned_cols=118 Identities=22% Similarity=0.402 Sum_probs=98.5
Q ss_pred CCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC------eeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEE
Q 009539 408 PAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG------EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVC 478 (532)
Q Consensus 408 ~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~------~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~ 478 (532)
....+.|+|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||.|.|.+... ...|.|+||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~l~~~V~ 93 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ--QHRLLFEVF 93 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT--TCEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC--CCEEEEEEE
Confidence 34689999999999999863 5799999999974 456999999999999999999999863 468999999
Q ss_pred EccccccCCCCCceeEEEEEechhhhcccee------ceEEEeCCC-----CCeEEEEEEEEEe
Q 009539 479 SVSSRIGLLHPKETLGYIDINLSDVVSNKRI------NEKYHLIDS-----KNGRIQIELQWRT 531 (532)
Q Consensus 479 d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~------~~~~~L~~~-----~~G~i~l~~~w~p 531 (532)
|++. ++.|++||++.++|+++...... .+||+|... ..|+|+++++|.|
T Consensus 94 d~d~----~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 94 DENR----LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ECCS----SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ECCC----CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 9985 67899999999999999875432 589999643 3699999999987
No 26
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.76 E-value=2.3e-18 Score=150.09 Aligned_cols=119 Identities=22% Similarity=0.465 Sum_probs=101.5
Q ss_pred ccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEE-----cCee
Q 009539 371 KSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGEE 442 (532)
Q Consensus 371 ~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~-----~~~~ 442 (532)
...|+|.+++.|. .|.|.|+|++|++|+.. +.+||||++++ +...
T Consensus 2 ~~~G~l~~~l~~~---------------------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~ 54 (137)
T 3rdl_A 2 EKRGRIYLKAEVT---------------------------DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESK 54 (137)
T ss_dssp CCCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCC
T ss_pred CcceEEEEEEEEc---------------------------CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCee
Confidence 3579999999983 58999999999999863 58999999999 4566
Q ss_pred EEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCCCCe
Q 009539 443 RKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNG 521 (532)
Q Consensus 443 ~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G 521 (532)
++|++++++.||.|||.|.|.+........|.++|||++. ++.|++||++.++|+++.... ..+||+|.+...|
T Consensus 55 ~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~----~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g 128 (137)
T 3rdl_A 55 QKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR----TTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEG 128 (137)
T ss_dssp EECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS----SSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHH
T ss_pred ecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC----CCCCceEEEEEEeHHHhccCc-cCceEECcCcccc
Confidence 8999999999999999999998754334589999999975 578999999999999998765 7899999865444
No 27
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=5.1e-18 Score=148.09 Aligned_cols=111 Identities=23% Similarity=0.428 Sum_probs=94.0
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCC-CCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEE-eeCC--CCCEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLL-GASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFT-VRDP--ESQAVELAV 324 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~-v~~~--~~~~L~v~v 324 (532)
+....+.|.|+|++|++|+.+|.. |.+||||++++.+.....++|++++++.||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 344678999999999999999985 899999999998654456799999999999999999996 5432 246899999
Q ss_pred EEccCCCCCCeeEEEEEeCccCCCCCCe-EEEEecc
Q 009539 325 YDWEQVGKHDKMGMNVVPLKELTPEEPS-VKTLDLL 359 (532)
Q Consensus 325 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~-~~~l~l~ 359 (532)
||+|..++|++||++.++|.++..+... ..|+++.
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 9999999999999999999999876544 4567764
No 28
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=5.7e-18 Score=146.78 Aligned_cols=115 Identities=25% Similarity=0.407 Sum_probs=100.9
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCCEEEEEEcCeeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccccc
Q 009539 409 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIG 485 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~ 485 (532)
...|.|.|+|++|++|+.. +.+||||++++++++++|++++++.||+|||.|.|.+.+. ...|.++|||++.
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~--~~~l~i~V~d~d~--- 84 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI--HDVLEVTVFDEDG--- 84 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT--TCEEEEEEEEEET---
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC--CCEEEEEEEECCC---
Confidence 4689999999999999863 5799999999999999999999999999999999999864 4689999999986
Q ss_pred CCCCCceeEEEEEechhhhccceeceEEEeCCC-----CCeEEEEEEEEEe
Q 009539 486 LLHPKETLGYIDINLSDVVSNKRINEKYHLIDS-----KNGRIQIELQWRT 531 (532)
Q Consensus 486 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~-----~~G~i~l~~~w~p 531 (532)
++.|++||++.++|.++..+. .+||+|.+. ..|+|+++++|..
T Consensus 85 -~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 85 -DKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp -TEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred -CCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 567899999999999986644 589999743 4699999999864
No 29
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.76 E-value=3.5e-18 Score=151.03 Aligned_cols=120 Identities=20% Similarity=0.312 Sum_probs=103.3
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCC----CCCCCCEEEEEEcC-----
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEG----KHHTNPYARILFRG----- 440 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~----~~~~dpyv~v~~~~----- 440 (532)
....|+|.+++.|.+. .+.|.|+|++|+||+. .+.+||||++++..
T Consensus 6 ~~~~G~l~~sl~y~~~-------------------------~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~ 60 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQ-------------------------TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQ 60 (148)
T ss_dssp CCCCCEEEEEEEEETT-------------------------TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGG
T ss_pred CccceEEEEEEEEeCC-------------------------CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCccc
Confidence 5678999999999863 7899999999999984 36799999999963
Q ss_pred eeEEEeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCC
Q 009539 441 EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 518 (532)
Q Consensus 441 ~~~kT~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 518 (532)
.+++|++++++.||+|||.|.|.+..... ...|.|+|||++. ++.|++||++.++|+++.......+||+|...
T Consensus 61 ~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 61 GKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR----FGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp GEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG----GGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred CccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC----CcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 36799999999999999999999876422 3479999999986 57899999999999999877777899999765
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=6.5e-18 Score=147.04 Aligned_cols=113 Identities=16% Similarity=0.307 Sum_probs=98.6
Q ss_pred CceEEEEEEeeeecCCCC---CC-----------CCCEEEEEEcCee-EEEeeecCCCCCcccceEEEEecCCCCCCeEE
Q 009539 410 GGGLLVVIVHEAQDVEGK---HH-----------TNPYARILFRGEE-RKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLH 474 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~~~---~~-----------~dpyv~v~~~~~~-~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~ 474 (532)
..|.|+|+|++|+||+.. +. +||||++++++.. .+|+++++|.||+|||.|+|.+.+. ..|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~---~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG---RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC---CEEE
Confidence 368999999999999863 22 8999999998876 4999999999999999999999764 6899
Q ss_pred EEEEEccccccCCCCCceeEEEEEechhhhccc--eeceEEEeCCCCCeEEEEEEEEEe
Q 009539 475 VEVCSVSSRIGLLHPKETLGYIDINLSDVVSNK--RINEKYHLIDSKNGRIQIELQWRT 531 (532)
Q Consensus 475 v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~--~~~~~~~L~~~~~G~i~l~~~w~p 531 (532)
++|||++. +++|++||++.++|+++..+. ..+.|++|. +.|+|+++++|.+
T Consensus 81 ~~V~d~d~----~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 81 LAVFHDAP----IGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEECCS----SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--SSCEEEEEEEEEE
T ss_pred EEEEeCCC----CCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--CCeEEEEEEEEEe
Confidence 99999985 678999999999999998753 458899986 4899999999986
No 31
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=3.3e-18 Score=151.93 Aligned_cols=120 Identities=18% Similarity=0.299 Sum_probs=102.6
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEc---CeeE
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR---GEER 443 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~---~~~~ 443 (532)
....|+|++++.|.+. .+.|.|+|++|+||+.. +.+||||++++. .+.+
T Consensus 25 ~~~~G~l~~~l~y~~~-------------------------~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 79 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDFQ-------------------------NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKF 79 (152)
T ss_dssp -CCCCEEEEEEEEETT-------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCE
T ss_pred CCCceEEEEEEEEeCC-------------------------CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceE
Confidence 5578999999999863 68999999999999864 579999999994 4567
Q ss_pred EEeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCC
Q 009539 444 KTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 518 (532)
Q Consensus 444 kT~vv~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 518 (532)
||++++++.||+|||.|.|.+.... ....|.|+|||++. ++.|++||++.++|+++..+....+||+|.+.
T Consensus 80 kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 80 ETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR----FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp ECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS----SSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred eccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC----CCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 9999999999999999999886421 23689999999985 67899999999999999877778999999764
No 32
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=3.7e-18 Score=149.49 Aligned_cols=122 Identities=27% Similarity=0.486 Sum_probs=101.9
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEE-----cCe
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGE 441 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~-----~~~ 441 (532)
+...|+|++++.|.+. .+.|.|+|++|+||+.. +.+||||++++ ..+
T Consensus 4 ~~~~G~i~~~l~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 58 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKV-------------------------GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKN 58 (141)
T ss_dssp CCCCCEEEEEEEEETT-------------------------TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSS
T ss_pred CCcccEEEEEEEEeCC-------------------------CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCc
Confidence 5678999999999863 68999999999999864 57899999999 345
Q ss_pred eEEEeeecCCCCCcccceEEEEecCCC--CCCeEEEEEEEccccccCCCC--CceeEEEEEechhhhccceeceEEEeCC
Q 009539 442 ERKTKHVKKNRDPRWEEEFQFMLEEPP--TNDRLHVEVCSVSSRIGLLHP--KETLGYIDINLSDVVSNKRINEKYHLID 517 (532)
Q Consensus 442 ~~kT~vv~~t~nP~w~e~f~f~v~~~~--~~~~l~v~V~d~~~~~~~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~L~~ 517 (532)
.++|++++++.||+|||.|.|.+.... ....|.|+|||++. ++. +++||++.++|.++.... ..+||+|..
T Consensus 59 ~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~----~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 59 KRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR----VREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp CCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCS----SSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred ceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCC----CcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 679999999999999999999953221 23589999999986 455 899999999999987654 789999987
Q ss_pred CCCe
Q 009539 518 SKNG 521 (532)
Q Consensus 518 ~~~G 521 (532)
...|
T Consensus 134 ~~~g 137 (141)
T 1v27_A 134 HDSG 137 (141)
T ss_dssp CSSC
T ss_pred cccC
Confidence 6544
No 33
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.75 E-value=1.8e-17 Score=146.49 Aligned_cols=118 Identities=22% Similarity=0.364 Sum_probs=99.4
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCCEEEEEEcCeeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccc--
Q 009539 409 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSR-- 483 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~-- 483 (532)
...|.|.|+|++|++|+.. +.+||||+++++++.++|++++++.||.|||.|.|.+... .+.|.++|||++..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~--~~~l~~~v~d~d~~~~ 91 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS--SDRIKVRVLDEDDDIK 91 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST--TCEEEEEEEECCCSHH
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC--CCEEEEEEEECCCCcc
Confidence 3579999999999999873 6899999999999999999999999999999999999864 36899999999851
Q ss_pred -----ccCCCCCceeEEEEEechhhhccceeceEEEeCCC-----CCeEEEEEEEEE
Q 009539 484 -----IGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS-----KNGRIQIELQWR 530 (532)
Q Consensus 484 -----~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~-----~~G~i~l~~~w~ 530 (532)
..-.+.|++||++.++|+++ .....+||+|... ..|+|+|++++.
T Consensus 92 ~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 92 SRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 00015799999999999998 3456799999742 359999999885
No 34
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=6.9e-18 Score=147.82 Aligned_cols=121 Identities=21% Similarity=0.282 Sum_probs=102.4
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEc---CeeE
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR---GEER 443 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~---~~~~ 443 (532)
....|+|++++.|.+. .+.|.|+|++|++|+.. +.+||||++++. .+.+
T Consensus 9 ~~~~G~l~~~l~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 63 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQ-------------------------ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKL 63 (141)
T ss_dssp CCCCCEEEEEEEECSS-------------------------SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEE
T ss_pred CceeeEEEEEEEEeCC-------------------------CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccE
Confidence 4578999999999853 68999999999999874 579999999995 3567
Q ss_pred EEeeecCCCCCcccceEEEEecCC--CCCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCCC
Q 009539 444 KTKHVKKNRDPRWEEEFQFMLEEP--PTNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK 519 (532)
Q Consensus 444 kT~vv~~t~nP~w~e~f~f~v~~~--~~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 519 (532)
||++++++.||+|||.|.|.+... .....|.|+|||++. ++++++||++.++|.++..+.....||+|....
T Consensus 64 kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 64 ETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR----FSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp ECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS----SSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred eCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC----CCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 999999999999999999986321 124589999999986 578999999999999998877788999997653
No 35
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=2.3e-18 Score=152.35 Aligned_cols=121 Identities=22% Similarity=0.488 Sum_probs=101.6
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC-----e
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG-----E 441 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~-----~ 441 (532)
....|+|++++.|. .+.|.|+|++|+||+.. +.+||||++++.+ .
T Consensus 16 ~~~~G~l~~~l~~~---------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 68 (149)
T 1a25_A 16 MERRGRIYIQAHID---------------------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSES 68 (149)
T ss_dssp -CTTCEEEEEEEES---------------------------SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSS
T ss_pred CCcceEEEEEEEec---------------------------CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcc
Confidence 45689999999872 46899999999999864 5789999999973 5
Q ss_pred eEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCCCCe
Q 009539 442 ERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNG 521 (532)
Q Consensus 442 ~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G 521 (532)
.+||++++++.||+|||+|.|.+........|.|+|||++. ++.|++||++.++|.++... ...+||+|.+...|
T Consensus 69 ~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g 143 (149)
T 1a25_A 69 KQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL----TSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEG 143 (149)
T ss_dssp CEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS----SSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHH
T ss_pred eEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC----CCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCC
Confidence 67999999999999999999999764334589999999986 57899999999999999875 46899999875555
Q ss_pred E
Q 009539 522 R 522 (532)
Q Consensus 522 ~ 522 (532)
+
T Consensus 144 ~ 144 (149)
T 1a25_A 144 E 144 (149)
T ss_dssp T
T ss_pred c
Confidence 4
No 36
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=7.5e-18 Score=145.19 Aligned_cols=115 Identities=27% Similarity=0.484 Sum_probs=94.2
Q ss_pred cccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEE-----cCeeE
Q 009539 372 SRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGEER 443 (532)
Q Consensus 372 ~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~-----~~~~~ 443 (532)
..|+|.+++.|.+. .+.|.|+|++|+||+.. +.+||||++++ +...+
T Consensus 3 ~~G~l~~~l~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~ 57 (129)
T 2bwq_A 3 LSGQLSIKLWFDKV-------------------------GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKR 57 (129)
T ss_dssp CCCEEEEEEEEETT-------------------------TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEE
T ss_pred eeEEEEEEEEEccC-------------------------CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcce
Confidence 47999999999863 68999999999999874 57899999999 35678
Q ss_pred EEeeecCCCCCcccceEEEEecCCC--CCCeEEEEEEEccccccCCCC--CceeEEEEEechhhhccceeceEEEeC
Q 009539 444 KTKHVKKNRDPRWEEEFQFMLEEPP--TNDRLHVEVCSVSSRIGLLHP--KETLGYIDINLSDVVSNKRINEKYHLI 516 (532)
Q Consensus 444 kT~vv~~t~nP~w~e~f~f~v~~~~--~~~~l~v~V~d~~~~~~~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~L~ 516 (532)
+|++++++.||+|||+|.|.+.... ....|.++|||++. ++. +++||++.++|.++.... ..+||+|.
T Consensus 58 kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~----~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 58 RTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR----VREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp ECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-----------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred ecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc----CcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9999999999999999999963211 23589999999985 455 899999999999987755 78999984
No 37
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.74 E-value=1e-17 Score=147.11 Aligned_cols=119 Identities=18% Similarity=0.301 Sum_probs=102.5
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEE---cCeeE
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF---RGEER 443 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~---~~~~~ 443 (532)
....|+|++++.|.+ ..+.|.|+|++|++|+.. +.+||||++++ +.+.+
T Consensus 17 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~ 71 (143)
T 3f04_A 17 VEKLGKLQYSLDYDF-------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKF 71 (143)
T ss_dssp CCCCCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCE
T ss_pred ccCeEEEEEEEEEeC-------------------------CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccE
Confidence 456899999999985 378999999999999874 58999999999 44578
Q ss_pred EEeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCC
Q 009539 444 KTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLID 517 (532)
Q Consensus 444 kT~vv~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~ 517 (532)
+|++++++.||+|||+|.|.+.... ....|.|+|||++. ++.|++||++.++|.++.......+||+|..
T Consensus 72 kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 72 ETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR----FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp ECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS----SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred ECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC----CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 9999999999999999999986421 23589999999986 6789999999999999988778889999964
No 38
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=4.6e-18 Score=149.15 Aligned_cols=111 Identities=24% Similarity=0.433 Sum_probs=96.0
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEE-eeCC--CCCEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFT-VRDP--ESQAVELA 323 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~-v~~~--~~~~L~v~ 323 (532)
+....+.|.|+|++|++|+..+..|.+||||++++.+.. ...++|++++++.||+|||+|.|. +... ....|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 334678999999999999999988999999999998632 245799999999999999999998 5322 13689999
Q ss_pred EEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEecc
Q 009539 324 VYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 359 (532)
Q Consensus 324 v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~ 359 (532)
|||++..++|++||++.+++.++..+.....|+.|.
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 999999999999999999999999988888888873
No 39
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=8.4e-18 Score=146.69 Aligned_cols=109 Identities=17% Similarity=0.263 Sum_probs=92.6
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCC-cCCceeeEeeCCCCCceeecEEEEEeeCCC--CCEEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED-KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAVY 325 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~v~ 325 (532)
+....+.|+|+|++|++ +|..|.+||||++++.+. ....++|+++++|+||+|||+|.|.+.... ...|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 44567899999999993 677899999999999642 223469999999999999999999986532 568999999
Q ss_pred EccCCCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 326 DWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 326 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
|+|.+++|++||++.++|.++..+.....|++|.+
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999987777788988854
No 40
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=4e-18 Score=150.46 Aligned_cols=111 Identities=29% Similarity=0.410 Sum_probs=93.6
Q ss_pred CCCCeEEEEEEEEEcCCCCcC-CC------CCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCC--CCCE
Q 009539 249 YRRPVGILHVKVVKAMNLKKK-DL------LGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQA 319 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~-d~------~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~ 319 (532)
+....+.|.|+|++|++|+.. +. .|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 445678999999999999984 43 35899999999986544567999999999999999999998642 2468
Q ss_pred EEEEEEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEecc
Q 009539 320 VELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 359 (532)
Q Consensus 320 L~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~ 359 (532)
|.|+|||++.+++|++||++.++|.++........|+.|.
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 9999999999999999999999999998776667787774
No 41
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=5.3e-18 Score=146.16 Aligned_cols=109 Identities=19% Similarity=0.375 Sum_probs=88.0
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeC---CCCCEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELA 323 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~ 323 (532)
+....+.|.|+|++|++|+.++..|.+||||++++.+.. ...++|+++++|.||+|||+|.|.+.. .....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 344568999999999999999999999999999996432 345799999999999999999999532 235799999
Q ss_pred EEEccCCCC--CCeeEEEEEeCccCCCCCCeEEEEec
Q 009539 324 VYDWEQVGK--HDKMGMNVVPLKELTPEEPSVKTLDL 358 (532)
Q Consensus 324 v~d~d~~~~--d~~iG~~~i~l~~l~~~~~~~~~l~l 358 (532)
|||++..++ +++||++.+++.++.... ...|++|
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999887 999999999999998654 6778765
No 42
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=6.1e-18 Score=149.31 Aligned_cols=121 Identities=24% Similarity=0.300 Sum_probs=101.7
Q ss_pred CCccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC----------CCCCCEEEEEE
Q 009539 369 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK----------HHTNPYARILF 438 (532)
Q Consensus 369 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~----------~~~dpyv~v~~ 438 (532)
.....|+|++++.|.|. .+.|.|+|++|+||+.. +.+||||++++
T Consensus 8 ~~~~~G~l~~~l~y~~~-------------------------~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l 62 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDLL-------------------------HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICL 62 (147)
T ss_dssp SCCCCCEEEEEEEEETT-------------------------TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEE
T ss_pred CCCcceEEEEEEEEcCC-------------------------CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEE
Confidence 45689999999999863 78999999999999863 37999999999
Q ss_pred cC---eeEEEeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEE
Q 009539 439 RG---EERKTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYH 514 (532)
Q Consensus 439 ~~---~~~kT~vv~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~ 514 (532)
.. +.++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++++++||++.++|.++........||.
T Consensus 63 ~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~w~~ 138 (147)
T 2enp_A 63 LPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDK----FSRHCVIGKVSVPLCEVDLVKGGHWWKA 138 (147)
T ss_dssp ETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCST----TCCSCCCEEEEEETTTSCTTTCCCEEEC
T ss_pred EeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCC----CcCCcEEEEEEEechhcCCCCCccEEEE
Confidence 63 5679999999999999999999986421 12489999999985 6789999999999999977666678888
Q ss_pred eCCC
Q 009539 515 LIDS 518 (532)
Q Consensus 515 L~~~ 518 (532)
|...
T Consensus 139 L~~~ 142 (147)
T 2enp_A 139 LIPS 142 (147)
T ss_dssp CBCC
T ss_pred eecC
Confidence 8754
No 43
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.74 E-value=2.3e-17 Score=150.20 Aligned_cols=118 Identities=21% Similarity=0.392 Sum_probs=95.4
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC------eeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEE
Q 009539 409 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG------EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCS 479 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~------~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d 479 (532)
...|.|.|+|++|++|+.. +.+||||++++++ +.++|++++++.||.|||.|.|.+... ...|.|+|||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~--~~~L~~~V~d 82 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ--RHRILFEVFD 82 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT--TCEEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC--CCEEEEEEEE
Confidence 3589999999999999863 6799999999976 567999999999999999999999853 4689999999
Q ss_pred ccccccCCCCCceeEEEEEechhhhcccee-c-----eEEEeCCC-----CCeEEEEEEEEEeC
Q 009539 480 VSSRIGLLHPKETLGYIDINLSDVVSNKRI-N-----EKYHLIDS-----KNGRIQIELQWRTA 532 (532)
Q Consensus 480 ~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~-~-----~~~~L~~~-----~~G~i~l~~~w~p~ 532 (532)
++. ++.|++||++.++|.++...... . +||+|... ..|+|+|++.|.|+
T Consensus 83 ~d~----~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENR----LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC--------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCC----CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 985 67899999999999999876432 2 79999743 26999999999984
No 44
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=5.1e-18 Score=148.84 Aligned_cols=111 Identities=27% Similarity=0.334 Sum_probs=93.4
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCC--CCCEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAV 324 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v 324 (532)
+....+.|.|+|++|++|+.++..| +||||++++.+.. ...++|+++++|.||+|||+|.|.+... ....|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 3445689999999999999999888 9999999997533 2567999999999999999999998532 246899999
Q ss_pred EEccCCCC--CCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 325 YDWEQVGK--HDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 325 ~d~d~~~~--d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
||++.+++ |++||++.+++.++..+.....|++|..
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 99998763 5799999999999987777777888754
No 45
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=3.1e-18 Score=151.41 Aligned_cols=112 Identities=21% Similarity=0.377 Sum_probs=97.0
Q ss_pred CCCCeEEEEEEEEEcCCCCcCC-CCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCCC--CCEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKD-LLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELA 323 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d-~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~ 323 (532)
+....+.|.|+|++|++|+..+ ..|.+||||++++.+.. ...++|+++++|.||+|||+|.|.+.... ...|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 4446789999999999999988 57899999999998643 23579999999999999999999986542 4579999
Q ss_pred EEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 324 VYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 324 v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
|||+|..++|++||++.++|.++..+.....|++|.+
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 9999999999999999999999987777888998854
No 46
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.73 E-value=5e-18 Score=150.84 Aligned_cols=118 Identities=17% Similarity=0.317 Sum_probs=99.3
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC---e--
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG---E-- 441 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~---~-- 441 (532)
....|+|++++.|.+ ..+.|.|+|++|+||+.. +.+||||++++.+ .
T Consensus 26 ~~~~G~l~~sl~y~~-------------------------~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~ 80 (155)
T 2z0u_A 26 AVGATRIQIALKYDE-------------------------KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTT 80 (155)
T ss_dssp --CCEEEEEEEEEET-------------------------TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHH
T ss_pred cCCcEEEEEEEEEcC-------------------------CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCc
Confidence 456899999999985 368999999999999863 6899999999965 2
Q ss_pred -eEEEeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEccccccCCCCCceeEEEEEechhhhc-cceeceEEEeC
Q 009539 442 -ERKTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVS-NKRINEKYHLI 516 (532)
Q Consensus 442 -~~kT~vv~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~-~~~~~~~~~L~ 516 (532)
++||+++++|.||+|||+|+|.+.... ....|.++|||++. ++++++||++.++|+++.. .....+||+|.
T Consensus 81 ~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~----~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 81 CLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR----SHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT----TSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred cceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC----CCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 679999999999999999999986421 13479999999986 6789999999999999964 45678999985
No 47
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.6e-17 Score=146.98 Aligned_cols=107 Identities=34% Similarity=0.545 Sum_probs=93.6
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCCC-CCEEEEEEEEccC
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE-SQAVELAVYDWEQ 329 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~v~d~d~ 329 (532)
.+.|.|+|++|++|+..+..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.... ...|.|+|||+|.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 47899999999999999988999999999998632 34579999999999999999999987532 4689999999999
Q ss_pred CCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 330 VGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
.++|++||++.+++.++..+ ....|++|..
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 99999999999999999876 4778888854
No 48
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.73 E-value=2.7e-17 Score=142.62 Aligned_cols=106 Identities=26% Similarity=0.413 Sum_probs=89.1
Q ss_pred ceEEEEEEeeeecCCC--CCCCCCEEEEEE-----cCeeEEEeeecCCCCCcccceEEEE-ecCCC-CCCeEEEEEEEcc
Q 009539 411 GGLLVVIVHEAQDVEG--KHHTNPYARILF-----RGEERKTKHVKKNRDPRWEEEFQFM-LEEPP-TNDRLHVEVCSVS 481 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~--~~~~dpyv~v~~-----~~~~~kT~vv~~t~nP~w~e~f~f~-v~~~~-~~~~l~v~V~d~~ 481 (532)
.+.|.|+|++|+||+. .+.+||||++++ ...++||++++++.||+|||+|.|. +.... ....|.|+|||++
T Consensus 19 ~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 6899999999999986 367999999999 3456799999999999999999999 65321 2358999999998
Q ss_pred ccccCCCCCceeEEEEEechhhhccceeceEEEeCCCCC
Q 009539 482 SRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKN 520 (532)
Q Consensus 482 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~ 520 (532)
. ++++++||++.++|+++..++...+||+|.+.+.
T Consensus 99 ~----~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 99 S----LRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp S----SSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred C----CCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 5 6789999999999999988777889999987543
No 49
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=4.4e-18 Score=149.28 Aligned_cols=119 Identities=19% Similarity=0.382 Sum_probs=100.5
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcCe-----
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGE----- 441 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~~----- 441 (532)
....|+|++++.|. .|.|.|+|++|+||+.. +.+||||++++.+.
T Consensus 3 ~~~~G~i~~~l~y~---------------------------~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~ 55 (142)
T 1rh8_A 3 HPITGEIQLQINYD---------------------------LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVM 55 (142)
T ss_dssp CCCCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCE
T ss_pred CCcceEEEEEEEEc---------------------------CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCccc
Confidence 45799999999996 46899999999999864 57999999999763
Q ss_pred ---------eEEEeeecCCCCCcccceEEEE-ecCCC-CCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceec
Q 009539 442 ---------ERKTKHVKKNRDPRWEEEFQFM-LEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRIN 510 (532)
Q Consensus 442 ---------~~kT~vv~~t~nP~w~e~f~f~-v~~~~-~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~ 510 (532)
.+||++++++.||+|||.|.|. +.... ....|.|+|||++. ++.+++||++.++|+++.......
T Consensus 56 ~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~----~~~~~~lG~~~i~l~~l~~~~~~~ 131 (142)
T 1rh8_A 56 VVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR----FSSNDFLGEVLIDLSSTSHLDNTP 131 (142)
T ss_dssp ECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECS----SSCEEEEEEEEEETTSCGGGTTCC
T ss_pred ccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCC----CCCCceEEEEEEeccccccCCCCC
Confidence 3699999999999999999997 53211 24589999999986 678999999999999998776778
Q ss_pred eEEEeCCCC
Q 009539 511 EKYHLIDSK 519 (532)
Q Consensus 511 ~~~~L~~~~ 519 (532)
+||+|....
T Consensus 132 ~W~~L~~~~ 140 (142)
T 1rh8_A 132 RWYPLKEQT 140 (142)
T ss_dssp EEEECBCCC
T ss_pred eEEECCccC
Confidence 999998653
No 50
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=1.2e-17 Score=145.46 Aligned_cols=107 Identities=34% Similarity=0.559 Sum_probs=93.4
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCC--cCCceeeEeeCCCCCceeecEEEEEeeCCC-CCEEEEEEEEccC
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE-SQAVELAVYDWEQ 329 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~v~d~d~ 329 (532)
.|.|.|+|++|++|+..+..|.+||||++++.+. ....++|++++++.||+|||+|.|.+.... ...|.|+|||++.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 4899999999999999999999999999999643 234579999999999999999999986532 4589999999999
Q ss_pred CCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 330 VGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
.++|++||++.+++.++..+. ...|++|..
T Consensus 95 ~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 95 TTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp SSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 999999999999999997654 778988854
No 51
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=1.2e-17 Score=146.31 Aligned_cols=111 Identities=19% Similarity=0.364 Sum_probs=93.4
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeC---CCCCEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELA 323 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~ 323 (532)
+....+.|.|+|++|++|+.++..|.+||||++++.+.. ...++|+++++|.||+|||+|.|.+.. .....|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 334568999999999999999999999999999995422 345699999999999999999999532 235799999
Q ss_pred EEEccCCCC--CCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 324 VYDWEQVGK--HDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 324 v~d~d~~~~--d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
|||++..++ +++||++.+++.++.... ...|++|..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 999999887 999999999999997654 778988854
No 52
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=7.6e-17 Score=140.61 Aligned_cols=121 Identities=21% Similarity=0.340 Sum_probs=99.9
Q ss_pred CCccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC----CCCCCEEEEEEcC---e
Q 009539 369 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK----HHTNPYARILFRG---E 441 (532)
Q Consensus 369 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~----~~~dpyv~v~~~~---~ 441 (532)
+....|+|.+++.|.+. .+.|.|+|++|+||+.. +.+||||++++.+ +
T Consensus 4 ~~~~~G~l~~~l~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~ 58 (138)
T 1ugk_A 4 GSSGLGTLFFSLEYNFE-------------------------RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKH 58 (138)
T ss_dssp CCCCCCEEEEEEEEEGG-------------------------GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCS
T ss_pred CCCccEEEEEEEEEECC-------------------------CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCc
Confidence 35678999999999863 78999999999999863 5689999999963 5
Q ss_pred eEEEeeecCCCCCcccceEEEE-ecCCC-CCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccce-eceEEEeCCC
Q 009539 442 ERKTKHVKKNRDPRWEEEFQFM-LEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKR-INEKYHLIDS 518 (532)
Q Consensus 442 ~~kT~vv~~t~nP~w~e~f~f~-v~~~~-~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~-~~~~~~L~~~ 518 (532)
.++|++++++.||+|||.|.|. +.... ....|.|+|||++. ++.|++||++.++|+++..... ..-|++|...
T Consensus 59 ~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~----~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 59 KVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR----FSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS----SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred eEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC----CCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 7799999999999999999996 65322 23589999999985 6789999999999999977543 3456788654
No 53
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.72 E-value=2.6e-17 Score=146.21 Aligned_cols=111 Identities=20% Similarity=0.361 Sum_probs=94.1
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCC--cCCceeeEeeCCCCCceeecEEEEEeeCC-CCCEEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVRDP-ESQAVELAVY 325 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~-~~~~L~v~v~ 325 (532)
+....|.|.|+|++|++|+..+ .|.+||||++++.+. ....++|+++++|.||+|||+|.|.+... ....|.|+||
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEE
Confidence 4556789999999999999999 699999999999653 23457999999999999999999998432 1356999999
Q ss_pred EccCCCC-CCeeEEEEEeCccCCC-CCCeEEEEeccc
Q 009539 326 DWEQVGK-HDKMGMNVVPLKELTP-EEPSVKTLDLLK 360 (532)
Q Consensus 326 d~d~~~~-d~~iG~~~i~l~~l~~-~~~~~~~l~l~~ 360 (532)
|++..++ |++||++.+++.++.. +.....|++|..
T Consensus 101 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 101 NRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp ECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred eCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 9998876 9999999999999985 677888998855
No 54
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.71 E-value=1.5e-17 Score=150.62 Aligned_cols=108 Identities=25% Similarity=0.422 Sum_probs=94.2
Q ss_pred CeEEEEEEEEEcCCCCcCCC-CCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEE-Ec
Q 009539 252 PVGILHVKVVKAMNLKKKDL-LGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVY-DW 327 (532)
Q Consensus 252 ~~g~L~V~v~~A~~L~~~d~-~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~-d~ 327 (532)
..|.|.|+|++|++|+.+|. .|.+||||++++.+.. ...++|+++++|.||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 46899999999999999985 6999999999998643 135699999999999999999999854 4689999999 99
Q ss_pred cCCCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 328 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 328 d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
|..++|++||++.++|.++..+.....|++|..
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~ 139 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFP 139 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBC
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCC
Confidence 999999999999999999998888889999854
No 55
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=5.1e-18 Score=148.85 Aligned_cols=108 Identities=25% Similarity=0.447 Sum_probs=93.2
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcC-----------CceeeEeeCCCCCceeecEEEEE-eeC--CCCC
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKL-----------PSKKTTVKHKNLNPEWNEEYNFT-VRD--PESQ 318 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~-----------~~~~T~v~~~t~nP~Wne~f~f~-v~~--~~~~ 318 (532)
.|.|.|+|++|++|+.+|..|.+||||++++.+... ..++|+++++|.||+|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 478999999999999999999999999999987532 23689999999999999999997 532 2367
Q ss_pred EEEEEEEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 319 AVELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 319 ~L~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
.|.|+|||+|..++|++||++.+++.++..+.....|++|..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 999999999999999999999999999987767778888743
No 56
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.2e-17 Score=146.46 Aligned_cols=121 Identities=23% Similarity=0.360 Sum_probs=100.6
Q ss_pred CCccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC-----
Q 009539 369 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG----- 440 (532)
Q Consensus 369 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~----- 440 (532)
+....|+|++++.|.+. .+.|.|+|++|+||+.. + +||||++++..
T Consensus 6 ~~~~~G~l~~~l~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~ 59 (142)
T 2dmg_A 6 SGSPLGQIQLTIRHSSQ-------------------------RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRS 59 (142)
T ss_dssp CSCSSCEEEEEEEEETT-------------------------TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSS
T ss_pred CCCCcceEEEEEEEeCC-------------------------CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCC
Confidence 45678999999999853 68999999999999863 5 99999999943
Q ss_pred eeEEEeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEccccccCCC--CCceeEEEEEechhhhccceeceEEEeCC
Q 009539 441 EERKTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLH--PKETLGYIDINLSDVVSNKRINEKYHLID 517 (532)
Q Consensus 441 ~~~kT~vv~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~--~d~~lG~~~i~L~~l~~~~~~~~~~~L~~ 517 (532)
.+++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++ .|++||++.++|+++.......+||+|..
T Consensus 60 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 60 GRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG----FLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp SCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC----SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred CcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC----ccccCCcEEEEEEEecccccccccccceeeccC
Confidence 5679999999999999999999985321 12489999999985 33 35799999999999887767789999986
Q ss_pred CC
Q 009539 518 SK 519 (532)
Q Consensus 518 ~~ 519 (532)
.+
T Consensus 136 ~~ 137 (142)
T 2dmg_A 136 DS 137 (142)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 57
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.71 E-value=1.5e-17 Score=149.93 Aligned_cols=106 Identities=19% Similarity=0.383 Sum_probs=91.2
Q ss_pred CCccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC-----
Q 009539 369 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG----- 440 (532)
Q Consensus 369 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~----- 440 (532)
.....|+|.+++.|.+. .+.|.|+|++|+||+.. +.+||||++++.+
T Consensus 19 ~~~~~G~l~~~l~y~~~-------------------------~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~ 73 (166)
T 2cm5_A 19 DIEERGKILVSLMYSTQ-------------------------QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKK 73 (166)
T ss_dssp -CCCCCEEEEEEEEETT-------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---C
T ss_pred CcCccceEEEEEEEECC-------------------------CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCcc
Confidence 35678999999999863 78999999999999863 5799999999976
Q ss_pred eeEEEeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEccccccCCCCCceeEEEEEechhh
Q 009539 441 EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDV 503 (532)
Q Consensus 441 ~~~kT~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l 503 (532)
..++|++++++.||+|||.|.|.+..... ...|.|+|||++. ++.+++||++.++|+++
T Consensus 74 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 74 AKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI----GKSNDYIGGCQLGISAK 133 (166)
T ss_dssp CEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS----SSCCEEEEEEEEETTCC
T ss_pred ceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC----CCCCcEEEeEEEecccC
Confidence 56799999999999999999999965321 3589999999985 67899999999999875
No 58
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.71 E-value=1.3e-16 Score=138.09 Aligned_cols=114 Identities=21% Similarity=0.383 Sum_probs=95.4
Q ss_pred CceEEEEEEeeeecCCCC---CCCCCEEEEEEcC--eeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccccc
Q 009539 410 GGGLLVVIVHEAQDVEGK---HHTNPYARILFRG--EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRI 484 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~--~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~ 484 (532)
....|+|+|++|++|+.. +.+||||++++++ +.++|++++++.||+|||.|.|.+... +.|.++|||++.
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~l~~~v~d~d~-- 77 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT---DSITISVWNHKK-- 77 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT---CCEEEEEEEGGG--
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC---CEEEEEEEECCC--
Confidence 356899999999999763 5799999999975 678999999999999999999999764 459999999985
Q ss_pred cCCCC---CceeEEEEEechhhhc-cceeceEEEeCCC-------CCeEEEEEEEEE
Q 009539 485 GLLHP---KETLGYIDINLSDVVS-NKRINEKYHLIDS-------KNGRIQIELQWR 530 (532)
Q Consensus 485 ~~~~~---d~~lG~~~i~L~~l~~-~~~~~~~~~L~~~-------~~G~i~l~~~w~ 530 (532)
++. |++||++.++++++.. .....+|++|... ..|+|.+++.++
T Consensus 78 --~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 78 --IHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp --TTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred --CCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 444 7999999999999844 3445688999654 269999999875
No 59
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.71 E-value=7.5e-17 Score=144.26 Aligned_cols=121 Identities=19% Similarity=0.337 Sum_probs=100.0
Q ss_pred CCccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC-----
Q 009539 369 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG----- 440 (532)
Q Consensus 369 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~----- 440 (532)
.....|+|++++.|.|. .+.|.|+|++|+||+.. +.+||||++++.+
T Consensus 7 ~~~~~G~l~~~l~y~~~-------------------------~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~ 61 (159)
T 1tjx_A 7 ILEKLGDICFSLRYVPT-------------------------AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRL 61 (159)
T ss_dssp GGGCCCEEEEEEEEETT-------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEE
T ss_pred CcCcCCeEEEEEEEcCC-------------------------CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCcee
Confidence 35678999999999863 78999999999999864 5799999999963
Q ss_pred eeEEEeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEccccccCCCCCceeEEEEEechh----------hhc--cc
Q 009539 441 EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSD----------VVS--NK 507 (532)
Q Consensus 441 ~~~kT~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~----------l~~--~~ 507 (532)
..++|++++++.||+|||+|.|.+..... ...|.|+|||++. ++.|++||++.+++.. ++. +.
T Consensus 62 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~----~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~ 137 (159)
T 1tjx_A 62 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK----IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRR 137 (159)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS----SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTC
T ss_pred ceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC----CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCC
Confidence 35699999999999999999999864322 3479999999985 6789999999999984 443 34
Q ss_pred eeceEEEeCCC
Q 009539 508 RINEKYHLIDS 518 (532)
Q Consensus 508 ~~~~~~~L~~~ 518 (532)
...+||+|...
T Consensus 138 ~~~~W~~L~~~ 148 (159)
T 1tjx_A 138 PIAQWHTLQVE 148 (159)
T ss_dssp CEEEEEECBCH
T ss_pred eeeeEEECcCc
Confidence 67899999754
No 60
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.71 E-value=1.9e-17 Score=147.12 Aligned_cols=118 Identities=18% Similarity=0.248 Sum_probs=92.2
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEc--Ce---
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR--GE--- 441 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~--~~--- 441 (532)
....|+|.+++.|.|. .+.|.|+|++|+||+.. +.+||||++++. ++
T Consensus 13 ~~~~G~l~~~l~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 67 (153)
T 1w15_A 13 PSGRGELLVSLCYQST-------------------------TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRIS 67 (153)
T ss_dssp ---CCEEEEEEEEETT-------------------------TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEE
T ss_pred CccccEEEEEEEEcCC-------------------------CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEec
Confidence 5578999999999863 68999999999999863 578999999993 33
Q ss_pred eEEEeeecCCCCCcccceEEEEecCCCCC-CeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCC
Q 009539 442 ERKTKHVKKNRDPRWEEEFQFMLEEPPTN-DRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 518 (532)
Q Consensus 442 ~~kT~vv~~t~nP~w~e~f~f~v~~~~~~-~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 518 (532)
++||++++++.||+|||+|.|.+...... ..|.|+|||++. ++.+++||++.++|++ ......+||+|...
T Consensus 68 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~----~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~ 139 (153)
T 1w15_A 68 KKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER----GSRNEVIGRLVLGATA--EGSGGGHWKEICDF 139 (153)
T ss_dssp EEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT----TSCCEEEEEEEESTTC--CSHHHHHHHHHHHS
T ss_pred eEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC----CCCCcEEEEEEECCCC--CchHHHHHHHHHhC
Confidence 56999999999999999999999764332 479999999985 6789999999999988 22233455555443
No 61
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=3.8e-17 Score=143.27 Aligned_cols=120 Identities=21% Similarity=0.397 Sum_probs=98.7
Q ss_pred CCccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC-----
Q 009539 369 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG----- 440 (532)
Q Consensus 369 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~----- 440 (532)
.....|+|.+++.|.+. .+.|.|+|++|++|+.. +.+||||++++.+
T Consensus 11 ~~~~~G~l~~~l~y~~~-------------------------~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~ 65 (142)
T 2chd_A 11 QATTLGALEFSLLYDQD-------------------------NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKS 65 (142)
T ss_dssp ---CCCEEEEEEEEEGG-------------------------GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGG
T ss_pred CCCccceEEEEEEEeCC-------------------------CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCc
Confidence 35678999999999863 78999999999999874 5789999999975
Q ss_pred eeEEEeeecCCCCCcccceEEEE-ecCCCC-CCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCC
Q 009539 441 EERKTKHVKKNRDPRWEEEFQFM-LEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLID 517 (532)
Q Consensus 441 ~~~kT~vv~~t~nP~w~e~f~f~-v~~~~~-~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~ 517 (532)
..+||++++++.||+|||.|.|. +..... ...|.|+|||++. ++.|++||++.++|+++..++...-|++|..
T Consensus 66 ~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~----~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 66 NKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK----FGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp GEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT----TSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC----CCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 57799999999999999999998 542111 2589999999985 5778999999999999987776666777754
No 62
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=1.6e-16 Score=156.24 Aligned_cols=132 Identities=19% Similarity=0.309 Sum_probs=113.6
Q ss_pred ccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC---eeEE
Q 009539 371 KSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG---EERK 444 (532)
Q Consensus 371 ~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~---~~~k 444 (532)
...|+|++++.|.+. .+.|.|+|++|+||+.. +.+||||++++++ +.++
T Consensus 3 ~~~G~l~~~l~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~ 57 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQ-------------------------NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFE 57 (284)
T ss_dssp CCCCEEEEEEEEETT-------------------------TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEE
T ss_pred cceeEEEEEEEEECC-------------------------CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEe
Confidence 468999999999863 78999999999999863 6899999999964 4679
Q ss_pred EeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCC-----
Q 009539 445 TKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS----- 518 (532)
Q Consensus 445 T~vv~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~----- 518 (532)
|++++++.||+|||+|.|.+.... ....|.++|||++. ++.|++||++.++|.++..+....+||+|...
T Consensus 58 T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~----~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~ 133 (284)
T 2r83_A 58 TKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR----FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQ 133 (284)
T ss_dssp CCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS----SSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCC
T ss_pred CCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC----CCCCceeEEEEEcchhcccCCcceeEEEeeccccccc
Confidence 999999999999999999986532 23589999999985 67899999999999999887788899999653
Q ss_pred -CCeEEEEEEEEEe
Q 009539 519 -KNGRIQIELQWRT 531 (532)
Q Consensus 519 -~~G~i~l~~~w~p 531 (532)
..|+|.++++|.|
T Consensus 134 ~~~G~i~l~l~~~p 147 (284)
T 2r83_A 134 EKLGDICFSLRYVP 147 (284)
T ss_dssp CCCCEEEEEEEEET
T ss_pred cccccEEEEEEecC
Confidence 3599999999876
No 63
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.70 E-value=7.6e-17 Score=138.99 Aligned_cols=89 Identities=20% Similarity=0.328 Sum_probs=74.8
Q ss_pred CCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeC-CCCCceeecEEEEEeeCCCCCEEEEEEEEccC
Q 009539 251 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPESQAVELAVYDWEQ 329 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 329 (532)
.+.+.|.|+|++|++++. .|.+||||+++ . +. .+|+++. ++.||+|||+|.|.+.+. ...|.|+|||+|
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 71 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QN---VKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 71 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE-e-cC---EEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-
Confidence 356899999999998853 57899999999 2 22 3555554 799999999999999864 568999999999
Q ss_pred CCCCCeeEEEEEeCccCCCC
Q 009539 330 VGKHDKMGMNVVPLKELTPE 349 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~~~ 349 (532)
.++|++||++.++|+++...
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBC
T ss_pred CCCCCeEEEEEEEHHHhhhc
Confidence 88999999999999998754
No 64
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.70 E-value=7.3e-17 Score=144.31 Aligned_cols=111 Identities=37% Similarity=0.591 Sum_probs=92.0
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCCC--CCEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAV 324 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~v 324 (532)
+....|.|.|+|++|+||+..|..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.... ...|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 444678999999999999999998999999999997532 23569999999999999999999986432 46899999
Q ss_pred EEccCCCCCCeeEEEEEeCccC------------CCCCCeEEEEecc
Q 009539 325 YDWEQVGKHDKMGMNVVPLKEL------------TPEEPSVKTLDLL 359 (532)
Q Consensus 325 ~d~d~~~~d~~iG~~~i~l~~l------------~~~~~~~~~l~l~ 359 (532)
||+|..++|++||++.+++..+ ..+.....|+.|.
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~ 146 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQ 146 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred EECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECc
Confidence 9999999999999999999864 2334556677664
No 65
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=5.3e-17 Score=141.52 Aligned_cols=99 Identities=31% Similarity=0.520 Sum_probs=85.7
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCCC--CCEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAV 324 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~v 324 (532)
+....|.|.|+|++|++|+..+..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.... ...|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 344568999999999999999998999999999997542 23468999999999999999999986542 36899999
Q ss_pred EEccCCCCCCeeEEEEEeCccCC
Q 009539 325 YDWEQVGKHDKMGMNVVPLKELT 347 (532)
Q Consensus 325 ~d~d~~~~d~~iG~~~i~l~~l~ 347 (532)
||+|..++|++||++.+++.++.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCH
T ss_pred EECCCCCCCcEEEEEEEccccCC
Confidence 99999999999999999999753
No 66
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.69 E-value=1e-16 Score=145.11 Aligned_cols=116 Identities=22% Similarity=0.312 Sum_probs=98.8
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCC----CCCCCCEEEEEEcCe----
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEG----KHHTNPYARILFRGE---- 441 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~----~~~~dpyv~v~~~~~---- 441 (532)
....|+|++++.|. .+.|.|+|++|+||+. .+.+||||++++.+.
T Consensus 15 ~~~~G~l~~~l~y~---------------------------~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~ 67 (171)
T 2q3x_A 15 TPAMGDIQIGMEDK---------------------------KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACI 67 (171)
T ss_dssp --CCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEE
T ss_pred CCCccEEEEEEEEC---------------------------CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccc
Confidence 45689999999992 5799999999999985 367999999998642
Q ss_pred -eEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEE-EccccccCCCCCceeEEEEEechhhhccceeceEEEeCCC
Q 009539 442 -ERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVC-SVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 518 (532)
Q Consensus 442 -~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~-d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 518 (532)
.+||++++++.||+|||+|+|.+.. ....|.|+|| |++. ++.|++||++.++|+++..++...+||+|...
T Consensus 68 ~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~L~~~V~~d~d~----~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 68 AKKKTRIARKTLDPLYQQSLVFDESP--QGKVLQVIVWGDYGR----MDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp EEEECCCCCSCSSCEEEEEEECSSCC--TTEEEEEEEEEECST----TCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred cceeCccCCCCCCCCCCcEEEEEecC--CCCEEEEEEEEcCCC----CCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 6699999999999999999999864 3468999999 8875 67899999999999999877778899999764
No 67
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.69 E-value=1.6e-16 Score=143.76 Aligned_cols=115 Identities=20% Similarity=0.351 Sum_probs=98.1
Q ss_pred CceEEEEEEeeeecCC-CC--CCCCCEEEEEEcCeeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccccccC
Q 009539 410 GGGLLVVIVHEAQDVE-GK--HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGL 486 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~-~~--~~~dpyv~v~~~~~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~~ 486 (532)
..+.|.|+|++|++|+ .. +.+||||+++++++.+||++++++.||+|||.|.|.+.. .+.|.|+|||++.
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~---~~~L~~~V~D~d~---- 106 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP---VSKLHFRVWSHQT---- 106 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT---TCEEEEEEEECCS----
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC---CCEEEEEEEECCC----
Confidence 5789999999999998 32 459999999999988999999999999999999999853 5689999999986
Q ss_pred CCCCceeEEEEEechhhhccc-----eeceEEEeCCC-----CCeEEEEEEEEEe
Q 009539 487 LHPKETLGYIDINLSDVVSNK-----RINEKYHLIDS-----KNGRIQIELQWRT 531 (532)
Q Consensus 487 ~~~d~~lG~~~i~L~~l~~~~-----~~~~~~~L~~~-----~~G~i~l~~~w~p 531 (532)
++.|++||++.++|.++.... ....|++|... ..|+|.+.+.+.|
T Consensus 107 ~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 107 LKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp SSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred CCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 678999999999999998632 23579999753 2699999998765
No 68
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=1.5e-16 Score=138.71 Aligned_cols=115 Identities=20% Similarity=0.403 Sum_probs=93.2
Q ss_pred ccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEEcC-----eeEE
Q 009539 373 RGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG-----EERK 444 (532)
Q Consensus 373 ~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~-----~~~k 444 (532)
+|+|.+++.|.+. .+.|.|+|++|+||+.. +.+||||++++.+ .+++
T Consensus 2 ~G~l~~sl~y~~~-------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~k 56 (138)
T 3n5a_A 2 RGELLLSLCYNPS-------------------------ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKK 56 (138)
T ss_dssp CCEEEEEEEEETT-------------------------TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEEcCC-------------------------CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEe
Confidence 6999999999863 78999999999999873 5799999999964 3569
Q ss_pred EeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCC
Q 009539 445 TKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 518 (532)
Q Consensus 445 T~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 518 (532)
|++++++.||+|||.|.|.+..... ...|.++|||++. ++.|++||++.++|+++.. ...+|++|...
T Consensus 57 T~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~----~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~~ 125 (138)
T 3n5a_A 57 TVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK----LSRNDVIGKIYLSWKSGPG--EVKHWKDMIAR 125 (138)
T ss_dssp CCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS----SSCCEEEEEEEESSSSCHH--HHHHHHHHHHS
T ss_pred CccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC----CCCCcEEEEEEEccccCCh--HHHHHHHHHhC
Confidence 9999999999999999999875421 2479999999986 6789999999999996432 23445555443
No 69
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.69 E-value=1.7e-16 Score=143.02 Aligned_cols=99 Identities=29% Similarity=0.525 Sum_probs=86.6
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCC--CCCEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAV 324 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v 324 (532)
+....+.|.|+|++|++|+..+..|.+||||++++.+.. ...++|+++++|.||+|||+|.|.+... ....|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 445678999999999999999999999999999998632 3457999999999999999999998643 256999999
Q ss_pred EEccCCCCCCeeEEEEEeCccCC
Q 009539 325 YDWEQVGKHDKMGMNVVPLKELT 347 (532)
Q Consensus 325 ~d~d~~~~d~~iG~~~i~l~~l~ 347 (532)
||++..++|++||++.+++.++.
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCCH
T ss_pred EECCCCCCCcEEEeEEEecccCC
Confidence 99999999999999999999863
No 70
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=8.4e-17 Score=142.97 Aligned_cols=97 Identities=34% Similarity=0.470 Sum_probs=79.1
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc--CCceeeEeeCCCCCceeecEEEEEeeCCC--CCEEEEEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAV 324 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~v 324 (532)
+....+.|.|+|++|++|+..+..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.... ...|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 344568999999999999999988999999999996432 22469999999999999999999987543 36899999
Q ss_pred EEccCCCCCCeeEEEEEeCcc
Q 009539 325 YDWEQVGKHDKMGMNVVPLKE 345 (532)
Q Consensus 325 ~d~d~~~~d~~iG~~~i~l~~ 345 (532)
||+|..++|++||++.+++.+
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999999999999999988
No 71
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.65 E-value=3.7e-16 Score=132.66 Aligned_cols=119 Identities=16% Similarity=0.253 Sum_probs=100.3
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeC-CCCCceeecEEEEEeeCCC--CCEEEEEEEEccC
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPE--SQAVELAVYDWEQ 329 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~--~~~L~v~v~d~d~ 329 (532)
.-.|+|+|.+|.+|+ |++|||+++.+.+.+ ++|++++ ++.||+|||.|.|++..+. ...|.+.|||+++
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k---~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTFRGQS---FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEETTEE---EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEEeccc---eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 347999999999998 578999999997544 5999998 7999999999999998643 6799999999999
Q ss_pred CCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEEc
Q 009539 330 VGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 385 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 385 (532)
++++++||++.++|+++..+.....+..|.. .++....++|.++++|.|.
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD------~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLID------DNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEEC------TTSCEEEEEEEEEEEEEET
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccC------CCCCccccEEEEEEEecCC
Confidence 9999999999999999998766666655533 1234456899999999985
No 72
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.63 E-value=5.2e-16 Score=165.35 Aligned_cols=121 Identities=26% Similarity=0.464 Sum_probs=103.5
Q ss_pred CCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEccCC
Q 009539 251 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQV 330 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~ 330 (532)
...|.|.|+|++|++|+.+|..|.+||||++++++.. ++|+++++|.||+|||+|.|.+..+....|+|+|||+|..
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~---~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS---YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee---ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4578999999999999999999999999999997543 5999999999999999999999877778899999999999
Q ss_pred CCCCeeEEEEEeCccCCCCCC----eEEEEecccccccCCCCCCccccEEEEEEEEEE
Q 009539 331 GKHDKMGMNVVPLKELTPEEP----SVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKP 384 (532)
Q Consensus 331 ~~d~~iG~~~i~l~~l~~~~~----~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p 384 (532)
++|++||++.+++.++..+.. ...|+.+ .+...|+|++++.+.-
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l----------~~~~~G~i~l~~~l~l 508 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLL----------HEVPTGEVWVRFDLQL 508 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEEC----------BSSSSCEEEEEEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecC----------CCCCCceEEEEEEEEE
Confidence 999999999999999876432 4566665 2457899999887653
No 73
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.63 E-value=1.6e-15 Score=149.88 Aligned_cols=133 Identities=21% Similarity=0.375 Sum_probs=109.2
Q ss_pred CccccEEEEEEEEEEccCCCCCcccccccccccCCCCCCCCceEEEEEEeeeecCCCC---CCCCCEEEEEE---cCeeE
Q 009539 370 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF---RGEER 443 (532)
Q Consensus 370 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~---~~~~~ 443 (532)
.+..|+|++++.|.+ ..+.|.|+|++|++|+.. +.+||||++++ +.+.+
T Consensus 3 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~ 57 (296)
T 1dqv_A 3 GAPCGRISFALRYLY-------------------------GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKF 57 (296)
T ss_dssp CCSSCEEEEEEECCS-------------------------SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCE
T ss_pred CCeeeEEEEEEEEeC-------------------------CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeE
Confidence 567999999999975 378999999999999864 57999999999 45678
Q ss_pred EEeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEccccccCCCCCceeEEEEEe-chhhhc-cceeceEEEeCCC--
Q 009539 444 KTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDIN-LSDVVS-NKRINEKYHLIDS-- 518 (532)
Q Consensus 444 kT~vv~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~~d~~lG~~~i~-L~~l~~-~~~~~~~~~L~~~-- 518 (532)
+|++++++.||+|||+|.|.+..... ...|.|+|||++. +++|++||++.++ +.++.. ......|++|...
T Consensus 58 kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~----~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~ 133 (296)
T 1dqv_A 58 QTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR----FSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGS 133 (296)
T ss_dssp ECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS----SSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSS
T ss_pred eCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC----CCCCceEEEEEeccccccccCCccceeeeccccccc
Confidence 99999999999999999999864321 3489999999986 6789999999996 555554 3345689999643
Q ss_pred ---CCeEEEEEEEEEe
Q 009539 519 ---KNGRIQIELQWRT 531 (532)
Q Consensus 519 ---~~G~i~l~~~w~p 531 (532)
..|+|.+.+.+.|
T Consensus 134 ~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 134 EKADLGELNFSLCYLP 149 (296)
T ss_dssp CCSCCCEEEEEEEEET
T ss_pred cccccceEEEEEEecc
Confidence 2599999999876
No 74
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.62 E-value=4.5e-15 Score=126.02 Aligned_cols=116 Identities=19% Similarity=0.405 Sum_probs=101.7
Q ss_pred ceEEEEEEeeeecCCCCCCCCCEEEEEEcCeeEEEeeec-CCCCCcccceEEEEecCCCC-CCeEEEEEEEccccccCCC
Q 009539 411 GGLLVVIVHEAQDVEGKHHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLH 488 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~~~~dpyv~v~~~~~~~kT~vv~-~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~ 488 (532)
--.|+|.|.+|.+|++ .+|||+++.+.+.++||++++ .+.||+|||.|+|++..+.. .+.|.|.|+|+++ +.
T Consensus 20 ~msL~V~l~~a~~Lpg--~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~----v~ 93 (144)
T 3l9b_A 20 HMALIVHLKTVSELRG--RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK----VF 93 (144)
T ss_dssp CEEEEEEEEEEESCCS--CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT----TS
T ss_pred cEEEEEEEEEecCCCC--CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc----cc
Confidence 4578999999999995 699999999999999999998 69999999999999987533 3589999999987 67
Q ss_pred CCceeEEEEEechhhhccceeceEEEeCCCC----CeEEEEEEEEEeC
Q 009539 489 PKETLGYIDINLSDVVSNKRINEKYHLIDSK----NGRIQIELQWRTA 532 (532)
Q Consensus 489 ~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~----~G~i~l~~~w~p~ 532 (532)
++++||++.++|.++...+...-+-.|.+.+ .+.|.+++.|.|+
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred CCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 8999999999999999988777777787654 4899999999985
No 75
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=2.5e-15 Score=134.79 Aligned_cols=89 Identities=19% Similarity=0.315 Sum_probs=75.3
Q ss_pred CCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeC-CCCCceeecEEEEEeeCCCCCEEEEEEEEccC
Q 009539 251 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPESQAVELAVYDWEQ 329 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 329 (532)
.+.+.|+|+|++|++++ ..|.+||||+++ . +. .+|++++ ++.||+|||+|.|.+.+. ...|.|+|||+|
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 80 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QN---VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 80 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-cc---eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-
Confidence 35789999999999884 258899999999 2 22 3666665 699999999999999864 568999999999
Q ss_pred CCCCCeeEEEEEeCccCCCC
Q 009539 330 VGKHDKMGMNVVPLKELTPE 349 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~~~ 349 (532)
.++|++||++.++|+++...
T Consensus 81 ~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCBC
T ss_pred CCCCceEEEEEEEHHHhccc
Confidence 88999999999999998654
No 76
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.61 E-value=3.4e-15 Score=157.43 Aligned_cols=114 Identities=22% Similarity=0.268 Sum_probs=96.0
Q ss_pred CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeC-CCCCEEEEEEEEc
Q 009539 249 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRD-PESQAVELAVYDW 327 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~-~~~~~L~v~v~d~ 327 (532)
.....|.|+|+|++|++|+. |..|++||||+++++++. .+|+++++++||+|||+|.|.+.. ...+.|+|+|||+
T Consensus 389 ~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~---~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~ 464 (540)
T 3nsj_A 389 RQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQE---FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDA 464 (540)
T ss_dssp SSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEE---EECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEEC
T ss_pred ccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEe---eeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEEC
Confidence 44568999999999999998 989999999999998653 699999999999999999998653 3578899999999
Q ss_pred cCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009539 328 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 383 (532)
Q Consensus 328 d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 383 (532)
|..++||+||++.++|.. + .++.|+.+ ..|+|+++++..
T Consensus 465 D~~~~dD~LG~~~~~L~~---g-~~~~~~~l-------------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 465 DYGWDDDLLGSCDRSPHS---G-FHEVTCEL-------------NHGRVKFSYHAK 503 (540)
T ss_dssp CSSSCCEEEEEEEECCCS---E-EEEEEEEC-------------SSSEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEeeC---C-cEEEEEEc-------------CCeEEEEEEEEE
Confidence 999999999999999882 2 35566654 368888887654
No 77
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.58 E-value=1.9e-14 Score=155.13 Aligned_cols=147 Identities=24% Similarity=0.377 Sum_probs=114.7
Q ss_pred ccceeeeCCcccccC--CCCCcc---CCCCeEEEEEEEEEcCCCCcCCC--CCCCCcEEEEEEeCC--cCCceeeEeeCC
Q 009539 228 VANMYLWPKTLEVPI--LDPSKA---YRRPVGILHVKVVKAMNLKKKDL--LGASDPYVKLKITED--KLPSKKTTVKHK 298 (532)
Q Consensus 228 ~~~~~v~P~~~~~~l--~~~~~~---~~~~~g~L~V~v~~A~~L~~~d~--~g~~dpyv~v~~~~~--~~~~~~T~v~~~ 298 (532)
-+++++.|..+..+- +++... .....+.|+|+|++|++|+..+. .|.+||||++++.+. ....+||+++++
T Consensus 466 ~~GYvlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ 545 (624)
T 1djx_A 466 GCGYVLKPAFLRDPNTTFNSRALTQGPWWRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITN 545 (624)
T ss_dssp GCSEEECCGGGGCTTCCCCTTSCCSSTTCCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTT
T ss_pred CCccEECCHHHcCCCCCcCcccccccCCccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccC
Confidence 478888899887653 233221 22467899999999999999884 688999999999763 223469999998
Q ss_pred C-CCceeecEEEEEeeCCCCCEEEEEEEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCC-ccccEE
Q 009539 299 N-LNPEWNEEYNFTVRDPESQAVELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNE-KSRGQL 376 (532)
Q Consensus 299 t-~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~-~~~G~l 376 (532)
+ .||+|||+|.|.+..+....|+|+|||+|..++|++||++.++|.++..+. .|++|... .+. -..|.|
T Consensus 546 ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~------~g~~~~~~~L 616 (624)
T 1djx_A 546 NGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSK------NGDQHPSATL 616 (624)
T ss_dssp CSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECT------TSCEEEEEEE
T ss_pred CCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCC------CcCCCCceEE
Confidence 7 999999999999987766799999999999999999999999999998752 46666331 112 246788
Q ss_pred EEEEEEE
Q 009539 377 VVEFIYK 383 (532)
Q Consensus 377 ~l~l~~~ 383 (532)
.+.+.|.
T Consensus 617 ~v~i~~~ 623 (624)
T 1djx_A 617 FVKISIQ 623 (624)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888774
No 78
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=2e-14 Score=123.72 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=85.4
Q ss_pred CceEEEEEEeeeecCCCCCCCCCEEEEEEcCeeEEEeeec-CCCCCcccceEEEEecCCCCCCeEEEEEEEccccccCCC
Q 009539 410 GGGLLVVIVHEAQDVEGKHHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLH 488 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~~~~~~dpyv~v~~~~~~~kT~vv~-~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~ 488 (532)
..+.|.|+|++|++++..+.+||||+++ ++..||++++ ++.||+|||.|.|.+.+. ...|.++|||++ ++
T Consensus 3 ~~~~L~V~V~~A~~l~~~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d-----~~ 73 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG-----LI 73 (131)
T ss_dssp CCEEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC--SSEEEEEEEECC-----SS
T ss_pred cceEEEEEEEEeECCCCCCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC--CCeEEEEEEECC-----CC
Confidence 4689999999999997778899999999 3445666555 799999999999999863 457999999997 35
Q ss_pred CCceeEEEEEechhhhccc--eeceEEEeCCC--------------CCeEEEEEEEE
Q 009539 489 PKETLGYIDINLSDVVSNK--RINEKYHLIDS--------------KNGRIQIELQW 529 (532)
Q Consensus 489 ~d~~lG~~~i~L~~l~~~~--~~~~~~~L~~~--------------~~G~i~l~~~w 529 (532)
.|++||++.++|+++.... ...+|.++.-. ..+.+.+.++|
T Consensus 74 ~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 74 WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred CCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 7999999999999987643 12245444211 13557777776
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.57 E-value=1.4e-14 Score=154.34 Aligned_cols=117 Identities=21% Similarity=0.452 Sum_probs=102.7
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCCEEEEEEcCeeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccccc
Q 009539 409 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIG 485 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~---~~~dpyv~v~~~~~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~ 485 (532)
...|.|.|+|++|++|+.. +.+||||+++++++.++|++++++.||+|||.|.|.+... ....+.++|||++.
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~-~~~~l~~~v~d~d~--- 459 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL-YQDVLCLTLFDRDQ--- 459 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCT-TTCEEEEEEEECCS---
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCC-CCCEEEEEEEeCCC---
Confidence 3578999999999999763 6899999999999999999999999999999999999765 45689999999986
Q ss_pred CCCCCceeEEEEEechhhhccce----eceEEEeCCCCCeEEEEEEEEE
Q 009539 486 LLHPKETLGYIDINLSDVVSNKR----INEKYHLIDSKNGRIQIELQWR 530 (532)
Q Consensus 486 ~~~~d~~lG~~~i~L~~l~~~~~----~~~~~~L~~~~~G~i~l~~~w~ 530 (532)
++.|++||++.++|+++..+.. ...|++|.+..+|+|.++++++
T Consensus 460 -~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 460 -FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp -SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred -CCCCCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 6789999999999999987543 6799999988899999988765
No 80
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.57 E-value=3.6e-15 Score=161.88 Aligned_cols=108 Identities=23% Similarity=0.397 Sum_probs=98.3
Q ss_pred CCeEEEEEEEEEcCCCCc---CCCCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEc
Q 009539 251 RPVGILHVKVVKAMNLKK---KDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDW 327 (532)
Q Consensus 251 ~~~g~L~V~v~~A~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~ 327 (532)
.+.|.|+|+|++|++|+. +|..|++||||++++.+.....+||+++++++||+|||+|.|.+..+..+.|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 468999999999999998 88889999999999987554567999999999999999999999876678999999999
Q ss_pred cCCCCCCeeEEEEEeCccCCCCCCeEEEEecc
Q 009539 328 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 359 (532)
Q Consensus 328 d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~ 359 (532)
|..+ |++||++.+++.++..+.....|++|.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 9998 999999999999999888788888874
No 81
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.53 E-value=5.5e-14 Score=126.05 Aligned_cols=87 Identities=23% Similarity=0.329 Sum_probs=74.7
Q ss_pred ceEEEEEEeeeecCCCCCCCCCEEEEEEcCeeEEEeeec-CCCCCcccceEEEEecCCCCCCeEEEEEEEccccccCCCC
Q 009539 411 GGLLVVIVHEAQDVEGKHHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHP 489 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~~~~dpyv~v~~~~~~~kT~vv~-~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~~ 489 (532)
.+.|+|+|++|++++..+.+||||+++ ++..||++++ ++.||+|||.|.|.+.+. ...|.|+|||++ ++.
T Consensus 13 ~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d-----~~~ 83 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG-----LIW 83 (167)
T ss_dssp CCEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT--TSEEEEEEEECC-----SSC
T ss_pred eEEEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC--CCEEEEEEEECC-----CCC
Confidence 679999999999997678899999999 4456777765 699999999999999863 457999999997 357
Q ss_pred CceeEEEEEechhhhcc
Q 009539 490 KETLGYIDINLSDVVSN 506 (532)
Q Consensus 490 d~~lG~~~i~L~~l~~~ 506 (532)
|++||++.++|+++...
T Consensus 84 dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp CEEEEEEEEEGGGSCBC
T ss_pred CceEEEEEEEHHHhccc
Confidence 99999999999998764
No 82
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.50 E-value=1.7e-13 Score=144.41 Aligned_cols=110 Identities=25% Similarity=0.358 Sum_probs=93.1
Q ss_pred CceEEEEEEeeeecCCC--CCCCCCEEEEEEcCeeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccccccCC
Q 009539 410 GGGLLVVIVHEAQDVEG--KHHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLL 487 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~~--~~~~dpyv~v~~~~~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~~~~ 487 (532)
..|.|.|+|++|++|+. .+.+||||++++++++.||++++++.||+|||.|.|.+...+..+.|.|+|||+|. +
T Consensus 392 ~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~----~ 467 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY----G 467 (540)
T ss_dssp TEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS----S
T ss_pred cccEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC----C
Confidence 47899999999999986 35799999999999999999999999999999999986543345689999999986 5
Q ss_pred CCCceeEEEEEechhhhccceeceEEEeCCCCCeEEEEEEEEE
Q 009539 488 HPKETLGYIDINLSDVVSNKRINEKYHLIDSKNGRIQIELQWR 530 (532)
Q Consensus 488 ~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l~~~w~ 530 (532)
+.|++||++.++|. .+....|++|. .|.|+++++..
T Consensus 468 ~~dD~LG~~~~~L~----~g~~~~~~~l~---~G~l~~~~~~~ 503 (540)
T 3nsj_A 468 WDDDLLGSCDRSPH----SGFHEVTCELN---HGRVKFSYHAK 503 (540)
T ss_dssp SCCEEEEEEEECCC----SEEEEEEEECS---SSEEEEEEEEE
T ss_pred CCCCEEEEEEEEee----CCcEEEEEEcC---CeEEEEEEEEE
Confidence 67899999999987 23457889875 67888887653
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.42 E-value=1.8e-14 Score=151.52 Aligned_cols=127 Identities=17% Similarity=0.258 Sum_probs=22.3
Q ss_pred CeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcCCceeeEeeCCC---CCceeecEEEEEeeCCCCCEEEEEEEEc-
Q 009539 252 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKN---LNPEWNEEYNFTVRDPESQAVELAVYDW- 327 (532)
Q Consensus 252 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t---~nP~Wne~f~f~v~~~~~~~L~v~v~d~- 327 (532)
..|.|+|+|++|++|+++| ||||++++++... .||+++++| .||+|||+|.|.+... ...|.++|||+
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~--~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~ 80 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY--ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDS 80 (483)
T ss_dssp EEECC----------------------------------------------------CCEECC-----------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE--eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecC
Confidence 4678999999999999876 9999999987543 589999999 9999999999987543 58899999994
Q ss_pred c---CCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccC-----------------CCCCCccccEEEEEEEEEEcc
Q 009539 328 E---QVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLN-----------------DGQNEKSRGQLVVEFIYKPFK 386 (532)
Q Consensus 328 d---~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~-----------------~~~~~~~~G~l~l~l~~~p~~ 386 (532)
| ..++|++||++.+++.++..+...+.|++|....... ..++....|.|++++.|.+..
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp --------------------------CCEECC--------------------------------------CEEEEEECC
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 4 3678999999999999999887888898884322100 001224579999999998764
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.39 E-value=8.7e-13 Score=143.31 Aligned_cols=109 Identities=18% Similarity=0.408 Sum_probs=94.1
Q ss_pred CCceEEEEEEeeeecCCC---C---CCCCCEEEEEEcC---eeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEE
Q 009539 409 AGGGLLVVIVHEAQDVEG---K---HHTNPYARILFRG---EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCS 479 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~---~---~~~dpyv~v~~~~---~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d 479 (532)
...+.|.|+|++|++|+. . +.+||||++++++ +++||++++++.||+|||+|+|.+... ....|.|+|||
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~-~~~~L~~~V~D 93 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMD 93 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCBCEEEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCC-CCCEEEEEEEE
Confidence 357999999999999987 3 6899999999984 577999999999999999999999875 45689999999
Q ss_pred ccccccCCCCCceeEEEEEechhhhccceeceEEEeCCCCCeEEEE
Q 009539 480 VSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNGRIQI 525 (532)
Q Consensus 480 ~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l 525 (532)
++. ++ |++||++.++|.++..+....+||+|... +++.+
T Consensus 94 ~D~----~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 94 ANY----VM-DETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CCS----SS-CEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CCC----CC-CceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 986 57 99999999999999877777899999753 44443
No 85
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.36 E-value=5.8e-14 Score=147.53 Aligned_cols=117 Identities=12% Similarity=0.212 Sum_probs=20.9
Q ss_pred CceEEEEEEeeeecCCCCCCCCCEEEEEEcCe-eEEEeeecCC---CCCcccceEEEEecCCCCCCeEEEEEEEc-cccc
Q 009539 410 GGGLLVVIVHEAQDVEGKHHTNPYARILFRGE-ERKTKHVKKN---RDPRWEEEFQFMLEEPPTNDRLHVEVCSV-SSRI 484 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~~~~~~dpyv~v~~~~~-~~kT~vv~~t---~nP~w~e~f~f~v~~~~~~~~l~v~V~d~-~~~~ 484 (532)
..+.|+|+|++|++|+.++ ||||+++++++ ..||+++++| .||+|||.|+|.+... .+.+.++|||+ +..
T Consensus 9 ~~~~L~V~VieAk~L~~~d--dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~~d~~- 83 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK--RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA--VRALRLHLYRDSDKK- 83 (483)
T ss_dssp EEECC-----------------------------------------------CCEECC----------------------
T ss_pred eccEEEEEEEEcCCcCCCC--CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC--ccEEEEEEEecCCcc-
Confidence 4678999999999999864 99999999886 4599999999 9999999999997543 36899999995 310
Q ss_pred cCCCCCceeEEEEEechhhhccceeceEEEeCCC---------------------------CCeEEEEEEEEEe
Q 009539 485 GLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS---------------------------KNGRIQIELQWRT 531 (532)
Q Consensus 485 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~---------------------------~~G~i~l~~~w~p 531 (532)
+.+++|++||++.++++++..+...++||+|.+. ..|.|+|+++|.+
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp -----------------------CCEECC--------------------------------------CEEEEEE
T ss_pred ccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeee
Confidence 0146799999999999999887778899999532 1489999999976
No 86
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.35 E-value=5.9e-12 Score=135.71 Aligned_cols=114 Identities=18% Similarity=0.296 Sum_probs=94.9
Q ss_pred CCceEEEEEEeeeecCCCC-----CCCCCEEEEEEcC-----eeEEEeeecCC-CCCcccceEEEEecCCCCCCeEEEEE
Q 009539 409 AGGGLLVVIVHEAQDVEGK-----HHTNPYARILFRG-----EERKTKHVKKN-RDPRWEEEFQFMLEEPPTNDRLHVEV 477 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~~-----~~~dpyv~v~~~~-----~~~kT~vv~~t-~nP~w~e~f~f~v~~~~~~~~l~v~V 477 (532)
...+.|+|+|++|++|+.. +.+||||+|.+.+ .++||++++++ .||+|||+|+|.+..+ ....|.++|
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~-el~~L~~~V 572 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVP-DLALVRFMV 572 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCG-GGCEEEEEE
T ss_pred ccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecC-CCCEEEEEE
Confidence 3678999999999999863 5799999999965 46799999997 9999999999999875 335899999
Q ss_pred EEccccccCCCCCceeEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 009539 478 CSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 530 (532)
Q Consensus 478 ~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~w~ 530 (532)
||++. +++|++||++.++|..+..+ .+|++|.+.. .+.|.|++++.
T Consensus 573 ~D~D~----~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 573 EDYDS----SSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EECCS----SSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEcCC----CCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 99985 67899999999999998653 3689997653 37778887764
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.27 E-value=3.9e-11 Score=132.38 Aligned_cols=144 Identities=17% Similarity=0.271 Sum_probs=106.0
Q ss_pred ccceeeeCCcccccC--CCCCcc---CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCc---CCceeeEeeCC-
Q 009539 228 VANMYLWPKTLEVPI--LDPSKA---YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK---LPSKKTTVKHK- 298 (532)
Q Consensus 228 ~~~~~v~P~~~~~~l--~~~~~~---~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~---~~~~~T~v~~~- 298 (532)
-+++++.|..|..+. +++... .......|.|+|++|++|+.. .+||||+|.+.+.. ..+++|+++++
T Consensus 694 ~cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~N 769 (885)
T 3ohm_B 694 RSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGN 769 (885)
T ss_dssp GCSEEECCGGGTCTTCCCCTTCSSCCTTCCCEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSC
T ss_pred ceeeeecCHHHcCCCcCcCCCcCcccCcccceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCC
Confidence 588999999887542 233221 122356899999999999853 58999999998632 22358998875
Q ss_pred CCCceeec-EEEEE-eeCCCCCEEEEEEEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEE
Q 009539 299 NLNPEWNE-EYNFT-VRDPESQAVELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQL 376 (532)
Q Consensus 299 t~nP~Wne-~f~f~-v~~~~~~~L~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l 376 (532)
+.||+||| +|.|. +..++...|+|+|||+| +++||++.+||..|..+. ..++|... ....-..|.|
T Consensus 770 glNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~-----~g~~l~~atL 837 (885)
T 3ohm_B 770 SFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRSGY---HYVCLRNE-----ANQPLCLPAL 837 (885)
T ss_dssp SSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEEEEEEETTTCCCEE---EEEEEECT-----TSCEEEEEEE
T ss_pred CcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEeeEEEEHHHcCCCc---eEEEecCC-----CCCccCceEE
Confidence 69999999 69998 76666678999999987 899999999999998763 23555321 0112357899
Q ss_pred EEEEEEEEccC
Q 009539 377 VVEFIYKPFKE 387 (532)
Q Consensus 377 ~l~l~~~p~~~ 387 (532)
.+.+.+.....
T Consensus 838 fv~i~~~~~~~ 848 (885)
T 3ohm_B 838 LIYTEASDYIP 848 (885)
T ss_dssp EEEEEEEECCC
T ss_pred EEEEEEEecCC
Confidence 99999986543
No 88
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.27 E-value=3.9e-11 Score=132.46 Aligned_cols=139 Identities=19% Similarity=0.281 Sum_probs=102.1
Q ss_pred ccceeeeCCcccccC--CCCCc---cCCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCC---cCCceeeE-eeC-
Q 009539 228 VANMYLWPKTLEVPI--LDPSK---AYRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED---KLPSKKTT-VKH- 297 (532)
Q Consensus 228 ~~~~~v~P~~~~~~l--~~~~~---~~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~---~~~~~~T~-v~~- 297 (532)
-+++++.|..|..+- +++.. ......|.|.|+|++|++|+. +++||||++.+.+. ..+++||+ +++
T Consensus 647 ~cGYVlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~ 722 (799)
T 2zkm_X 647 QSGYLLKHEFMRRPDKQFNPFSVDRIDVVVATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPST 722 (799)
T ss_dssp GCSEEECCGGGTCTTSCCCTTSCCTTTTTTCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSS
T ss_pred CCCceECCHHHhCCCccCCCcccccccceeeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccC
Confidence 478999999887542 23322 122357899999999999985 46899999999652 22346898 776
Q ss_pred CCCCceeec-EEEE-EeeCCCCCEEEEEEEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCC-cccc
Q 009539 298 KNLNPEWNE-EYNF-TVRDPESQAVELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNE-KSRG 374 (532)
Q Consensus 298 ~t~nP~Wne-~f~f-~v~~~~~~~L~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~-~~~G 374 (532)
++.||+||| +|.| .+..++...|+|+|||+| +++||++.+|+..|..+ ..+++|... .+. -..+
T Consensus 723 n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d----~d~iG~~~ipl~~L~~G---~r~v~L~~~------~g~~~~~~ 789 (799)
T 2zkm_X 723 NSINPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSG---YHHLCLHSE------SNMPLTMP 789 (799)
T ss_dssp CCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT----TEEEEEEEEEGGGBCCE---EEEEEEECT------TCCEEEEE
T ss_pred CCCCCeeecceEEEEEEccCCccEEEEEEEEeC----CCccceEeeehhhcCCC---cEEEeccCC------CCCCCCce
Confidence 579999999 6999 887666679999999986 79999999999999865 335555321 111 2457
Q ss_pred EEEEEEEEE
Q 009539 375 QLVVEFIYK 383 (532)
Q Consensus 375 ~l~l~l~~~ 383 (532)
.|.+.+.+.
T Consensus 790 ~Lfv~i~~~ 798 (799)
T 2zkm_X 790 ALFIFLEMK 798 (799)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 777777663
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.25 E-value=7.7e-12 Score=137.32 Aligned_cols=107 Identities=34% Similarity=0.559 Sum_probs=92.4
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCC--cCCceeeEeeCCCCCceeecEEEEEeeCCC-CCEEEEEEEEccC
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE-SQAVELAVYDWEQ 329 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~v~d~d~ 329 (532)
.+.|.|+|.+|++|..+|..|.+||||++++.+. ...+.+|+++++++||+|||+|.|.+.... ...|.++|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 5789999999999999999999999999999543 234579999999999999999999987543 4579999999999
Q ss_pred CCCCCeeEEEEEeCccCCCCCCeEEEEeccc
Q 009539 330 VGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 360 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~ 360 (532)
.++|++||++.+++.++.... ...|+.+..
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred ccccccccccccchhhhccCC-cccceeecc
Confidence 999999999999999998654 477887754
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.21 E-value=4.5e-11 Score=131.19 Aligned_cols=104 Identities=23% Similarity=0.517 Sum_probs=89.2
Q ss_pred ceEEEEEEeeeecCCCC---CCCCCEEEEEE-----cCeeEEEeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccc
Q 009539 411 GGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSS 482 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~---~~~dpyv~v~~-----~~~~~kT~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~ 482 (532)
.+.|.|++.+|++|... +.+||||++++ ...+++|++++++.||.|||.|.|.+........+.++|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 57899999999999763 68999999999 34567999999999999999999999865445579999999986
Q ss_pred cccCCCCCceeEEEEEechhhhccceeceEEEeCCCC
Q 009539 483 RIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK 519 (532)
Q Consensus 483 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 519 (532)
++.|++||++.++++++.... ..+||.|....
T Consensus 251 ----~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~ 282 (674)
T 3pfq_A 251 ----TSRNDFMGSLSFGISELQKAG-VDGWFKLLSQE 282 (674)
T ss_dssp ----SSCCEECCBCCCBTTHHHHCC-EEEEEECBCTT
T ss_pred ----ccccccccccccchhhhccCC-cccceeecccc
Confidence 678999999999999998754 48999997543
No 91
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.21 E-value=9.9e-11 Score=128.55 Aligned_cols=144 Identities=19% Similarity=0.312 Sum_probs=104.4
Q ss_pred ccceeeeCCcccccC--CCCCcc---CCCCeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcC----CceeeEeeCC
Q 009539 228 VANMYLWPKTLEVPI--LDPSKA---YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKL----PSKKTTVKHK 298 (532)
Q Consensus 228 ~~~~~v~P~~~~~~l--~~~~~~---~~~~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~----~~~~T~v~~~ 298 (532)
-+++++.|..|..+- +++... .....+.|.|+|++|++|+.+ .+||||++.+.+... .+++|+++++
T Consensus 619 ~cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~ 694 (816)
T 3qr0_A 619 CSGYLLKPEFMRKLDKRFDPFTESTVDGVVAGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIEN 694 (816)
T ss_dssp TCSEEECCHHHHCTTCCCCTTCCSCCTTSCCEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCS
T ss_pred ceeeeecChHhcCCCcccCCCCCCCcCCccceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecC
Confidence 478889998876532 232221 122458999999999999853 589999999986321 2458998875
Q ss_pred -CCCceeecE-EEEE-eeCCCCCEEEEEEEEccCCCCCCeeEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccE
Q 009539 299 -NLNPEWNEE-YNFT-VRDPESQAVELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQ 375 (532)
Q Consensus 299 -t~nP~Wne~-f~f~-v~~~~~~~L~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~ 375 (532)
+.||+|||+ |.|. +..++...|+|+|||++ +++||++.+||..|..+- ..++|... ....-..+.
T Consensus 695 nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~-----~g~~~~~at 762 (816)
T 3qr0_A 695 NGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDGIKPGY---RHVPLRNE-----SNRPLGLAS 762 (816)
T ss_dssp CSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT----SCEEEEEEEESTTCCCEE---EEEEEECT-----TSCEEEEEE
T ss_pred CCCCCeEcCceeEEccccCCCccEEEEEEEecC----CCeeeEEEEEHHHcCCcc---eEEEEeCC-----CCCCCCceE
Confidence 699999998 9998 76666679999999985 789999999999998763 34555321 001224478
Q ss_pred EEEEEEEEEccC
Q 009539 376 LVVEFIYKPFKE 387 (532)
Q Consensus 376 l~l~l~~~p~~~ 387 (532)
|.+.+.+.....
T Consensus 763 Lfv~i~~~~~~~ 774 (816)
T 3qr0_A 763 VFAHIVAKDYVS 774 (816)
T ss_dssp EEEEEEEEECCC
T ss_pred EEEEEEEEecCc
Confidence 888888876543
No 92
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.03 E-value=2.5e-09 Score=88.01 Aligned_cols=114 Identities=15% Similarity=0.238 Sum_probs=86.3
Q ss_pred CeEEEEEEEEEcCCCCcCCCCCCCCcEEEEEEeCCcC-Cceee-EeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEccC
Q 009539 252 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKL-PSKKT-TVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQ 329 (532)
Q Consensus 252 ~~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 329 (532)
..+.|+|.+.++.--+-+......||||.+.+..... ...+| ..++.|..|+|||+|.-.+++ .+.|.+.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC
Confidence 3457888886665322222223579999999975332 12365 778899999999999999876 5899999997653
Q ss_pred CCCCCeeEEEEEeCccCC-----CCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009539 330 VGKHDKMGMNVVPLKELT-----PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 383 (532)
Q Consensus 330 ~~~d~~iG~~~i~l~~l~-----~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 383 (532)
++++.|++++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 82 ----~fvAn~tV~~edL~~~c~~~~g~~e~WvdL------------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLAERCKKNNGKAEFWLDL------------QPQAKVLMSVQYF 124 (126)
T ss_dssp ----EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC------------BSSCEEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEe
Confidence 89999999999998 34456789886 5699999999987
No 93
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.99 E-value=3.4e-09 Score=116.47 Aligned_cols=107 Identities=18% Similarity=0.272 Sum_probs=86.0
Q ss_pred ceEEEEEEeeeecCCCCCCCCCEEEEEEcC-------eeEEEeeecC-CCCCcccce-EEEE-ecCCCCCCeEEEEEEEc
Q 009539 411 GGLLVVIVHEAQDVEGKHHTNPYARILFRG-------EERKTKHVKK-NRDPRWEEE-FQFM-LEEPPTNDRLHVEVCSV 480 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~~~~dpyv~v~~~~-------~~~kT~vv~~-t~nP~w~e~-f~f~-v~~~~~~~~l~v~V~d~ 480 (532)
.+.|+|+|++|++|+.. .+||||+|.+.+ +++||+++++ +.||+|||+ |+|. +..+ ....|.++|||+
T Consensus 649 ~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~p-ela~Lrf~V~D~ 726 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK-QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLP-DLAVVRIIVSEE 726 (816)
T ss_dssp CEEEEEEEEEEECCCSS-CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCG-GGCEEEEEEEET
T ss_pred ceEEEEEEEEcccCCCC-CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCC-CccEEEEEEEec
Confidence 57899999999999864 789999999976 4669999986 699999998 9998 7654 335899999997
Q ss_pred cccccCCCCCceeEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 009539 481 SSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 530 (532)
Q Consensus 481 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~w~ 530 (532)
+ +++||++.++|+.|..+ -++.+|.+.. .+.|.+.+..+
T Consensus 727 d--------ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 727 N--------GKFIGHRVMPLDGIKPG---YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp T--------SCEEEEEEEESTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred C--------CCeeeEEEEEHHHcCCc---ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 4 58999999999998653 3568887653 26666666554
No 94
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.98 E-value=3.4e-09 Score=88.32 Aligned_cols=114 Identities=16% Similarity=0.236 Sum_probs=88.4
Q ss_pred CeEEEEEEEEEcCCCCcCC-CCCCCCcEEEEEEeCCcC-Cceee-EeeCCCCCceeecEEEEEeeCCCCCEEEEEEEEcc
Q 009539 252 PVGILHVKVVKAMNLKKKD-LLGASDPYVKLKITEDKL-PSKKT-TVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWE 328 (532)
Q Consensus 252 ~~g~L~V~v~~A~~L~~~d-~~g~~dpyv~v~~~~~~~-~~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d 328 (532)
..+.|+|.+.++.--+-.. .....||||.+.+..... ...+| ..++.|..|+|||+|.-.+++ .+.|.|.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 4567888887776544332 123579999999975422 23577 778889999999999998876 589999999654
Q ss_pred CCCCCCeeEEEEEeCccCC-----CCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009539 329 QVGKHDKMGMNVVPLKELT-----PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 383 (532)
Q Consensus 329 ~~~~d~~iG~~~i~l~~l~-----~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 383 (532)
. ++++.|++++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL------------eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLEL------------KPQGRMLMNARYF 129 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC------------BSSCEEEEEEEEC
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEE
Confidence 2 89999999999998 44567899886 5699999999996
No 95
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.97 E-value=3.5e-09 Score=116.91 Aligned_cols=108 Identities=21% Similarity=0.261 Sum_probs=85.6
Q ss_pred CceEEEEEEeeeecCCCCCCCCCEEEEEEcC------eeEEEe-eecC-CCCCcccc-eEEE-EecCCCCCCeEEEEEEE
Q 009539 410 GGGLLVVIVHEAQDVEGKHHTNPYARILFRG------EERKTK-HVKK-NRDPRWEE-EFQF-MLEEPPTNDRLHVEVCS 479 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~~~~~~dpyv~v~~~~------~~~kT~-vv~~-t~nP~w~e-~f~f-~v~~~~~~~~l~v~V~d 479 (532)
..+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ +.||+||| .|+| .+..+ ....|.++|+|
T Consensus 676 ~~~~L~V~Visa~~L~~-~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~-el~~Lr~~V~D 753 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMP-ELASLRVAVME 753 (799)
T ss_dssp TCEEEEEEEEEEESCCS-SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSG-GGCEEEEEEEE
T ss_pred eeeeEEEEEEeccccCc-cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccC-CccEEEEEEEE
Confidence 46899999999999986 5799999999954 256999 8875 69999999 6999 88664 33489999999
Q ss_pred ccccccCCCCCceeEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 009539 480 VSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 530 (532)
Q Consensus 480 ~~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~w~ 530 (532)
++ +++||++.++|+.|..+ .++++|.+.. .+.+.|+++++
T Consensus 754 ~d--------~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 754 EG--------NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp TT--------TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred eC--------CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 85 58999999999998543 3578886643 26666776654
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.97 E-value=2.5e-08 Score=82.07 Aligned_cols=108 Identities=12% Similarity=0.243 Sum_probs=85.5
Q ss_pred CceEEEEEEeeeec--CCC-CCCCCCEEEEEEcCee----EEE-eeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcc
Q 009539 410 GGGLLVVIVHEAQD--VEG-KHHTNPYARILFRGEE----RKT-KHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVS 481 (532)
Q Consensus 410 ~~g~L~v~i~~a~~--L~~-~~~~dpyv~v~~~~~~----~kT-~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~ 481 (532)
....|+|.+.++.- |+. ....||||.|.+.... .+| ...++|..|+||+.|.-.+.+. ..|.+.|++..
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~a 80 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG---RVIQIVLMRAA 80 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT---CEEEEEEEEET
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC---EEEEEEEEcCC
Confidence 45678888876653 332 2368999999986543 255 7778899999999999999875 68999999653
Q ss_pred ccccCCCCCceeEEEEEechhhhcc-----ceeceEEEeCCCCCeEEEEEEEEE
Q 009539 482 SRIGLLHPKETLGYIDINLSDVVSN-----KRINEKYHLIDSKNGRIQIELQWR 530 (532)
Q Consensus 482 ~~~~~~~~d~~lG~~~i~L~~l~~~-----~~~~~~~~L~~~~~G~i~l~~~w~ 530 (532)
.++++.+++.+.+|.++ ...+-|.+|+ ++|+|++.++|-
T Consensus 81 --------~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 81 --------EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--PQAKVLMSVQYF 124 (126)
T ss_dssp --------TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--SSCEEEEEEEEE
T ss_pred --------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--cCcEEEEEEEEe
Confidence 28999999999999954 4567899987 599999999884
No 97
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.94 E-value=3.8e-09 Score=116.66 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=85.8
Q ss_pred ceEEEEEEeeeecCCCCCCCCCEEEEEEcC------eeEEEeeecC-CCCCcccc-eEEEE-ecCCCCCCeEEEEEEEcc
Q 009539 411 GGLLVVIVHEAQDVEGKHHTNPYARILFRG------EERKTKHVKK-NRDPRWEE-EFQFM-LEEPPTNDRLHVEVCSVS 481 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~~~~dpyv~v~~~~------~~~kT~vv~~-t~nP~w~e-~f~f~-v~~~~~~~~l~v~V~d~~ 481 (532)
...|.|+|++|++|+.. .+||||+|.+.+ .++||+++++ +.||+||| +|+|. +..+ ....|.++|||++
T Consensus 724 ~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~p-ela~Lrf~V~D~d 801 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLP-TLASLRIAAFEEG 801 (885)
T ss_dssp CEEEEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCG-GGCEEEEEEEETT
T ss_pred ceEEEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcC-CcCEEEEEEEcCC
Confidence 45899999999999874 789999999975 2469999986 59999999 69998 7654 3358999999985
Q ss_pred ccccCCCCCceeEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 009539 482 SRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 530 (532)
Q Consensus 482 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~w~ 530 (532)
+++||++.++|+.|..+ -+..+|.+.. .|.|.|.+..+
T Consensus 802 --------ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 802 --------GKFVGHRILPVSAIRSG---YHYVCLRNEANQPLCLPALLIYTEAS 844 (885)
T ss_dssp --------TEEEEEEEEETTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred --------ccEEeeEEEEHHHcCCC---ceEEEecCCCCCccCceEEEEEEEEE
Confidence 58999999999998653 3567886643 37788877765
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.92 E-value=2.4e-08 Score=83.26 Aligned_cols=108 Identities=13% Similarity=0.212 Sum_probs=86.3
Q ss_pred CceEEEEEEeeeecCC--C--CCCCCCEEEEEEcCee----EEE-eeecCCCCCcccceEEEEecCCCCCCeEEEEEEEc
Q 009539 410 GGGLLVVIVHEAQDVE--G--KHHTNPYARILFRGEE----RKT-KHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSV 480 (532)
Q Consensus 410 ~~g~L~v~i~~a~~L~--~--~~~~dpyv~v~~~~~~----~kT-~vv~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~ 480 (532)
..+.|+|.+.++.--+ . ....||||.|.+.... .+| ..+++|..|+||+.|.-.+.+. ..|.|.|++.
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~ 84 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG---RVMQIIVKGK 84 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS---CEEEEEEECS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC---eEEEEEEEcC
Confidence 4678888887776432 2 3468999999996653 377 7778899999999999999865 6899999954
Q ss_pred cccccCCCCCceeEEEEEechhhhcc-----ceeceEEEeCCCCCeEEEEEEEEE
Q 009539 481 SSRIGLLHPKETLGYIDINLSDVVSN-----KRINEKYHLIDSKNGRIQIELQWR 530 (532)
Q Consensus 481 ~~~~~~~~~d~~lG~~~i~L~~l~~~-----~~~~~~~~L~~~~~G~i~l~~~w~ 530 (532)
. .+++..+++.+.+|+++ ...+-|.+|+ +.|+|++.++|.
T Consensus 85 a--------~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--P~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 N--------VDLISETTVELYSLAERCRKNNGKTEIWLELK--PQGRMLMNARYF 129 (138)
T ss_dssp S--------CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB--SSCEEEEEEEEC
T ss_pred C--------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--cCcEEEEEEEEE
Confidence 2 38999999999999954 3567899997 599999999984
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=93.46 E-value=2.1 Score=38.82 Aligned_cols=57 Identities=11% Similarity=0.177 Sum_probs=41.7
Q ss_pred CceeeEeeCCCCCceeecEEEEEeeCC--CCCEEEEEEEEccCC----CCCCeeEEEEEeCcc
Q 009539 289 PSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYDWEQV----GKHDKMGMNVVPLKE 345 (532)
Q Consensus 289 ~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d~d~~----~~d~~iG~~~i~l~~ 345 (532)
..++|.+...+.+|.|+|++.+.+... ....|.|++++.... .....+|.+.+||-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346888888899999999999988643 356899999875421 122467888777654
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=92.22 E-value=1.7 Score=37.13 Aligned_cols=129 Identities=14% Similarity=0.150 Sum_probs=85.1
Q ss_pred CCCCeEEEEEEEEEcCCCCcCC-CCCCCCcEEEEEEeCCcCCceeeEeeCCCCCceeecEEEEEeeCC-------CCCEE
Q 009539 249 YRRPVGILHVKVVKAMNLKKKD-LLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP-------ESQAV 320 (532)
Q Consensus 249 ~~~~~g~L~V~v~~A~~L~~~d-~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~-------~~~~L 320 (532)
...-.+.+.|+|.++.--+..- ..+..+|+.-+.++=-....+.|.+.. +.+|.+|-+-.|.|.-. ....+
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3445789999999987322111 124457766666654344445666655 88999999888888532 14578
Q ss_pred EEEEEEccCCCCCCeeEEEEEeCccCCCCCCe-EEEEecccccccCCCCCC-ccccEEEEEEEEEEc
Q 009539 321 ELAVYDWEQVGKHDKMGMNVVPLKELTPEEPS-VKTLDLLKNMDLNDGQNE-KSRGQLVVEFIYKPF 385 (532)
Q Consensus 321 ~v~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~-~~~l~l~~~~~~~~~~~~-~~~G~l~l~l~~~p~ 385 (532)
.++++... .+..+.+|.+.|++.++...+.+ ....++.. ..+. ..-|.|.+.++....
T Consensus 92 ~lELhqa~-g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g------~~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 92 TLEVHQAY-STEYETIAACQLKFHEILEKSGRIFCTASLIG------TKGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEEEC-SSCEEEEEEEEECCSHHHHCCSCEEEEEEECB------SSSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEEee-CCCceEEEEEEEEhHHhhCcCCceEEEEEEEc------CCCCcceEEEEEEEEEEecc
Confidence 99998875 34456899999999999866543 23344422 1122 578999999988754
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.98 E-value=1.9 Score=36.95 Aligned_cols=116 Identities=17% Similarity=0.288 Sum_probs=80.2
Q ss_pred CCceEEEEEEeeeecCCC-----CCCCCCEEEEEE--cC-eeEEEeeecCCCCCcccceEEEEecCCC------CCCeEE
Q 009539 409 AGGGLLVVIVHEAQDVEG-----KHHTNPYARILF--RG-EERKTKHVKKNRDPRWEEEFQFMLEEPP------TNDRLH 474 (532)
Q Consensus 409 ~~~g~L~v~i~~a~~L~~-----~~~~dpyv~v~~--~~-~~~kT~vv~~t~nP~w~e~f~f~v~~~~------~~~~l~ 474 (532)
..-+.+.+.|.++. +.. .+..+|+.-+.+ -. +.+-|.+++ ..+|.+|-+-.|.+.... ....+.
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 45678999999886 332 134567555554 33 445566555 899999999999886421 123688
Q ss_pred EEEEEccccccCCCCCceeEEEEEechhhhccc-eeceEEEeCCCC-----CeEEEEEEEEEe
Q 009539 475 VEVCSVSSRIGLLHPKETLGYIDINLSDVVSNK-RINEKYHLIDSK-----NGRIQIELQWRT 531 (532)
Q Consensus 475 v~V~d~~~~~~~~~~d~~lG~~~i~L~~l~~~~-~~~~~~~L~~~~-----~G~i~l~~~w~p 531 (532)
+++..... +.-..||++.|+|.++++++ .+...-+|.+.. -|.++..++++.
T Consensus 93 lELhqa~g-----~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 93 LEVHQAYS-----TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEECS-----SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEEeeC-----CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 88887743 34569999999999999764 355566776542 488998888874
No 102
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=91.45 E-value=1.8 Score=48.24 Aligned_cols=92 Identities=11% Similarity=0.205 Sum_probs=61.8
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEE--eCCcCC-ceeeEeeCCCCCceeecEEEEEee--C-CCCCEEEEEEEE
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKI--TEDKLP-SKKTTVKHKNLNPEWNEEYNFTVR--D-PESQAVELAVYD 326 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~--~~~~~~-~~~T~v~~~t~nP~Wne~f~f~v~--~-~~~~~L~v~v~d 326 (532)
...++|+|.++.++... ..++-||.+.+ +++... ...|+.+....+|.|||...|++. + |....|.+++|+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 45799999999998654 34577877766 333321 234555555778999999999875 2 447899999999
Q ss_pred ccCC--C----------CCCeeEEEEEeCccCC
Q 009539 327 WEQV--G----------KHDKMGMNVVPLKELT 347 (532)
Q Consensus 327 ~d~~--~----------~d~~iG~~~i~l~~l~ 347 (532)
.... + .+..+|.+.+++-+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 6321 1 2448999999887654
No 103
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=91.01 E-value=2 Score=48.41 Aligned_cols=93 Identities=22% Similarity=0.290 Sum_probs=61.5
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEE--eCCcCCc-eeeEeeCCCCCceeecEEEEEee--C-CCCCEEEEEEEE
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKI--TEDKLPS-KKTTVKHKNLNPEWNEEYNFTVR--D-PESQAVELAVYD 326 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~--~~~~~~~-~~T~v~~~t~nP~Wne~f~f~v~--~-~~~~~L~v~v~d 326 (532)
...++|+|..+.++.... ....+-||.+.+ |++.... .+|+. ....+|.|||...|.+. + |....|.++||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 357899999999886432 234577888777 3443322 23433 34567889999999875 2 447899999998
Q ss_pred ccCC----CCCCeeEEEEEeCccCC
Q 009539 327 WEQV----GKHDKMGMNVVPLKELT 347 (532)
Q Consensus 327 ~d~~----~~d~~iG~~~i~l~~l~ 347 (532)
.... ..+..+|.+.++|-+-.
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 6542 12457899888887654
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=87.51 E-value=1.7 Score=48.48 Aligned_cols=94 Identities=14% Similarity=0.227 Sum_probs=64.0
Q ss_pred ceEEEEEEeeeecCCCCCCCCCEEEEEE--cCee----EEEeeecCCCCCcccceEEEEe--cCCCCCCeEEEEEEEccc
Q 009539 411 GGLLVVIVHEAQDVEGKHHTNPYARILF--RGEE----RKTKHVKKNRDPRWEEEFQFML--EEPPTNDRLHVEVCSVSS 482 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~~~~dpyv~v~~--~~~~----~kT~vv~~t~nP~w~e~f~f~v--~~~~~~~~l~v~V~d~~~ 482 (532)
...+.|+|.++.++......+-||++.+ |++. ..|..+....+|.|||-++|.+ .+.|.+..|.++||+...
T Consensus 216 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 295 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVE 295 (940)
T ss_dssp CSEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC-
T ss_pred CCceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecC
Confidence 4688999999999887656677877654 5543 4666666688999999877765 455677899999998631
Q ss_pred c--------ccCCCCCceeEEEEEechhhh
Q 009539 483 R--------IGLLHPKETLGYIDINLSDVV 504 (532)
Q Consensus 483 ~--------~~~~~~d~~lG~~~i~L~~l~ 504 (532)
. .+--..+..+|.+.++|-+-.
T Consensus 296 ~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 296 KAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp ---------------CEEEEEEEEESBCTT
T ss_pred CccCccccccccccccceEEEEeeeEECCc
Confidence 0 000012459999999998754
No 105
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=84.57 E-value=4 Score=45.62 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=62.5
Q ss_pred EEEEEEEEEcCCCCcCCCCCCCCcEEEEEE--eCCcCCceeeEeeCCCCCceeecEEEEEee--C-CCCCEEEEEEEEcc
Q 009539 254 GILHVKVVKAMNLKKKDLLGASDPYVKLKI--TEDKLPSKKTTVKHKNLNPEWNEEYNFTVR--D-PESQAVELAVYDWE 328 (532)
Q Consensus 254 g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~--~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~--~-~~~~~L~v~v~d~d 328 (532)
..++|+|..+....-.+ ...++-||++.+ |+......+|+.+.-+.+|.|||...|.+. + |....|.+++|+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 46888888876422111 124577877655 333332234544455667999999998765 2 44789999999854
Q ss_pred CCC----------------CCCeeEEEEEeCccCCCC-CCeEEEEeccc
Q 009539 329 QVG----------------KHDKMGMNVVPLKELTPE-EPSVKTLDLLK 360 (532)
Q Consensus 329 ~~~----------------~d~~iG~~~i~l~~l~~~-~~~~~~l~l~~ 360 (532)
..+ +...+|.+.++|-+-... ......+.+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L~lw~ 345 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVLHMWQ 345 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTSBBCCEEEEEECEE
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCCccccCCEEEEEee
Confidence 221 344788888888765432 12234444443
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=78.68 E-value=5 Score=45.26 Aligned_cols=93 Identities=28% Similarity=0.416 Sum_probs=61.9
Q ss_pred ceEEEEEEeeeecCCCC--CCCCCEEEEEE--cCee----EEEeeecCCCCCcccceEEEEe--cCCCCCCeEEEEEEEc
Q 009539 411 GGLLVVIVHEAQDVEGK--HHTNPYARILF--RGEE----RKTKHVKKNRDPRWEEEFQFML--EEPPTNDRLHVEVCSV 480 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~--~~~dpyv~v~~--~~~~----~kT~vv~~t~nP~w~e~f~f~v--~~~~~~~~l~v~V~d~ 480 (532)
...++|+|.++.++... ...+-||++.+ |++. .+|+.+. ..+|.|||-.+|.+ .+.|....|.++||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 46789999999887643 34677888776 4432 3454443 56788999877766 4556778999999986
Q ss_pred cccccCCCCCceeEEEEEechhhh
Q 009539 481 SSRIGLLHPKETLGYIDINLSDVV 504 (532)
Q Consensus 481 ~~~~~~~~~d~~lG~~~i~L~~l~ 504 (532)
....+--.....||.+.++|-|-.
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTT
T ss_pred cCccCcccccceeEEeeeeeEccC
Confidence 531110012468999999998754
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=78.32 E-value=5.5 Score=45.13 Aligned_cols=72 Identities=18% Similarity=0.270 Sum_probs=50.6
Q ss_pred eEEEEEEEEEcCCCCcCCCCCCCCcEEEEEE--eCCcCC-ceeeEeeCCCCCceeecEEEEEeeC---CCCCEEEEEEEE
Q 009539 253 VGILHVKVVKAMNLKKKDLLGASDPYVKLKI--TEDKLP-SKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELAVYD 326 (532)
Q Consensus 253 ~g~L~V~v~~A~~L~~~d~~g~~dpyv~v~~--~~~~~~-~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~v~d 326 (532)
...++|+|..+.++... ..++-||.+.+ |+.... ..+|+.+....+|.|||...|++.- |....|.+++|+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 45899999999998754 34577776544 544331 2245555557789999999988752 347899999998
Q ss_pred c
Q 009539 327 W 327 (532)
Q Consensus 327 ~ 327 (532)
.
T Consensus 429 ~ 429 (1092)
T 2y3a_A 429 V 429 (1092)
T ss_dssp C
T ss_pred e
Confidence 6
No 108
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=77.77 E-value=3.2 Score=46.95 Aligned_cols=94 Identities=13% Similarity=0.223 Sum_probs=63.2
Q ss_pred ceEEEEEEeeeecCCCCCCCCCEEEE--EEcCee----EEEeeecCCCCCcccceEEEEec--CCCCCCeEEEEEEEccc
Q 009539 411 GGLLVVIVHEAQDVEGKHHTNPYARI--LFRGEE----RKTKHVKKNRDPRWEEEFQFMLE--EPPTNDRLHVEVCSVSS 482 (532)
Q Consensus 411 ~g~L~v~i~~a~~L~~~~~~dpyv~v--~~~~~~----~kT~vv~~t~nP~w~e~f~f~v~--~~~~~~~l~v~V~d~~~ 482 (532)
...++|+|.++.++......+-||++ +.|++. .+|+.+....+|.|||-++|.+. +.|.+..|.++||+...
T Consensus 352 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~ 431 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLD 431 (1092)
T ss_dssp CSEEEEEECCCCCCCCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC--
T ss_pred CCCEEEEEEEeccCCCCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEecC
Confidence 56899999999999876667777774 456653 35666666788999998777664 55667799999998621
Q ss_pred c-ccC-----------------CCCCceeEEEEEechhhh
Q 009539 483 R-IGL-----------------LHPKETLGYIDINLSDVV 504 (532)
Q Consensus 483 ~-~~~-----------------~~~d~~lG~~~i~L~~l~ 504 (532)
. .+. -+....+|.+.++|-+-.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 432 KVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp ----------------------------CCEEEEESBCTT
T ss_pred ccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 0 000 012348999999987753
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=76.39 E-value=7.6 Score=43.44 Aligned_cols=95 Identities=12% Similarity=0.145 Sum_probs=58.9
Q ss_pred ceEEEEEEeeeec--CCCCCCCCCEEEEE--EcCee---EEEeeecCCCCCcccceEEEEe--cCCCCCCeEEEEEEEcc
Q 009539 411 GGLLVVIVHEAQD--VEGKHHTNPYARIL--FRGEE---RKTKHVKKNRDPRWEEEFQFML--EEPPTNDRLHVEVCSVS 481 (532)
Q Consensus 411 ~g~L~v~i~~a~~--L~~~~~~dpyv~v~--~~~~~---~kT~vv~~t~nP~w~e~f~f~v--~~~~~~~~l~v~V~d~~ 481 (532)
...++|.|.++.. ++.+...+-||++. .|++. .+|..+.-+.+|.|||-++|.+ .+.|.+..|.++||+..
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 3467777777754 23333446677754 45543 2555555677899999877765 45567789999999764
Q ss_pred cccc------------CCCCCceeEEEEEechhhhc
Q 009539 482 SRIG------------LLHPKETLGYIDINLSDVVS 505 (532)
Q Consensus 482 ~~~~------------~~~~d~~lG~~~i~L~~l~~ 505 (532)
...+ --+....+|.+.++|-+-..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTS
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 2100 00124589999999987543
No 110
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=65.99 E-value=20 Score=32.41 Aligned_cols=61 Identities=18% Similarity=0.196 Sum_probs=42.3
Q ss_pred eEEEeeecCCCCCcccceEEEEecCCCCC-CeEEEEEEEccccccCCCCCceeEEEEEechh
Q 009539 442 ERKTKHVKKNRDPRWEEEFQFMLEEPPTN-DRLHVEVCSVSSRIGLLHPKETLGYIDINLSD 502 (532)
Q Consensus 442 ~~kT~vv~~t~nP~w~e~f~f~v~~~~~~-~~l~v~V~d~~~~~~~~~~d~~lG~~~i~L~~ 502 (532)
..+|.|.+++.+|.|+|++.+.++..... ..|.++++.......--..+..+|-+-++|-+
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 46899999999999999999999865222 36888887654210000123578988888753
Done!