Your job contains 1 sequence.
>009555
MRERERERERQRGSRSQTLLLLPDPIFFINFFYLQNSRLLSLLNKIHPSLIFIHCFFLLQ
TDRRQPPDNHPKMYEETGCFDPNSMAEGGDDGISQSVKHHKEDDAAVSAIELELQKHLAF
NVEDTHTQSISINSNTHSIHDPANQNHQILPPYEHSHSNWDSGVVSADHMGGFDQNENDQ
SQQSFINTDISSSFAQSQTPPLLNLLQFPRCTTSSMLPPNSSISFTNPDHHFPVPPPTST
DVLYDPLFHLNLPPQPQPPLFRELFQSIPHGYSFPASASRAAANSLFGEIGDERDATGAF
YEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVP
NPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDP
ADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLH
HVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQYAAVPPTSCAY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009555
(532 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 430 2.8e-67 3
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 544 3.7e-62 2
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 535 4.2e-59 2
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 528 2.9e-56 2
UNIPROTKB|Q5JNS0 - symbol:P0706B05.43 "Os01g0293100 prote... 271 2.0e-35 2
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 157 1.3e-10 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 167 2.8e-09 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 157 1.3e-08 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 161 1.7e-08 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 158 3.1e-08 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 154 3.8e-08 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 157 5.2e-08 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 154 1.0e-07 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 145 1.2e-07 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 150 1.5e-07 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 147 1.6e-07 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 147 1.8e-07 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 151 2.1e-07 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 144 3.9e-07 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 151 4.1e-07 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 144 4.9e-07 3
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 143 5.3e-07 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 141 8.7e-07 2
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 139 1.3e-06 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 131 1.4e-06 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 141 1.6e-06 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 133 2.9e-06 2
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 145 4.5e-06 3
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 133 5.9e-06 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 135 6.0e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 128 6.3e-06 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 123 8.5e-06 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 129 1.2e-05 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 130 1.4e-05 1
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 127 1.7e-05 2
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 132 1.8e-05 2
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 136 1.9e-05 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 130 2.0e-05 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 129 2.5e-05 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 130 2.5e-05 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 126 5.8e-05 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 128 5.9e-05 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 125 6.4e-05 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 125 7.1e-05 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 126 7.5e-05 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 121 9.7e-05 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 125 0.00011 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 124 0.00011 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 125 0.00013 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 123 0.00015 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 124 0.00017 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 122 0.00020 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 121 0.00023 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 119 0.00024 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 109 0.00025 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 121 0.00028 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 122 0.00031 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 119 0.00031 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 118 0.00034 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 118 0.00035 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 120 0.00036 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 116 0.00041 2
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 117 0.00051 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 119 0.00052 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 111 0.00061 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 115 0.00062 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 115 0.00063 2
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 116 0.00064 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 105 0.00066 2
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 116 0.00072 1
UNIPROTKB|Q6ZBQ2 - symbol:P0605H02.26 "BHLH protein famil... 118 0.00073 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 117 0.00080 1
TAIR|locus:2152262 - symbol:BIM3 "AT5G38860" species:3702... 114 0.00081 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 113 0.00094 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 116 0.00099 1
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 430 (156.4 bits), Expect = 2.8e-67, Sum P(3) = 2.8e-67
Identities = 85/116 (73%), Positives = 100/116 (86%)
Query: 415 KPLVDPADQ-SYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLD 473
KP D DQ S N+SLR SWLQRKSK TEVDVRI+DDEVTIK+VQ+KKI+CLL VS+VLD
Sbjct: 311 KPESDVIDQCSSNNSLRCSWLQRKSKVTEVDVRIVDDEVTIKVVQKKKINCLLLVSKVLD 370
Query: 474 ELQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQYAAVPPTS 529
+LQLDLHHVAGG IG++YSFLFNTKIYEGS++YA +IAN++IEV+DK Y A P S
Sbjct: 371 QLQLDLHHVAGGQIGEHYSFLFNTKIYEGSTIYASAIANRVIEVVDKHYMASLPNS 426
Score = 191 (72.3 bits), Expect = 2.8e-67, Sum P(3) = 2.8e-67
Identities = 42/100 (42%), Positives = 65/100 (65%)
Query: 293 ERDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKF 352
+RD + E+ + D+ ++EFS+++ RR+ + K F TER+RR LN ++
Sbjct: 177 QRDESNVGDENNNA--QFDSGIIEFSKEI----RRKGRGKRKNKPFTTERERRCHLNERY 230
Query: 353 KALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
+ALK L+P+P+K DRAS++ D I+YI EL R V+ELK LV
Sbjct: 231 EALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLV 270
Score = 93 (37.8 bits), Expect = 2.8e-67, Sum P(3) = 2.8e-67
Identities = 49/173 (28%), Positives = 69/173 (39%)
Query: 73 MYEETGCFDPNSMAE--GGDDGISQS--VKHHKEDDAAVSAIELELQKHLAFNVE-DTHT 127
MYEE+ CFDPNSM + GG + V H + + + L E
Sbjct: 1 MYEESSCFDPNSMVDNNGGFCAAETTFTVSHQFQPPLGSTTNSFDDDLKLPTMDEFSVFP 60
Query: 128 QXXXXXXXXXXXXDPANQNHQILPPYEHSHSNWDSGVVSADHMGGFDQNENDQSQQSFIN 187
+ +N NH I + S NW VS D N N F+N
Sbjct: 61 SVISLPNSETQNQNISNNNHLINQMIQES--NWG---VSED-------NSN-----FFMN 103
Query: 188 TDISSSFAQSQTPPLLNLLQFPRCTTSSMLPPNSSIS---FT-NPDHHFPVPP 236
T ++ + P LL+LL PRC+ S LP + ++ FT +P H +PP
Sbjct: 104 TSHPNT-TTTPIPDLLSLLHLPRCSMS--LPSSDIMAGSCFTYDPLFHLNLPP 153
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 544 (196.6 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 124/233 (53%), Positives = 157/233 (67%)
Query: 311 DNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASV 370
+N +LEF+ + GR + ++ TER+RR N +F LK+L+PNPTK DRAS+
Sbjct: 226 ENEILEFNNGVTRKGR----GSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASI 281
Query: 371 VGDAIEYIKELLRTVNELKLLVXXXXXXXXXXXXXXXXXXXXG------------MKPL- 417
VG+AI+YIKELLRT+ E K+LV G KP
Sbjct: 282 VGEAIDYIKELLRTIEEFKMLVEKKRCGRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQS 341
Query: 418 -VDPA--DQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDE 474
VD + +++ N+SLR SWL+RKSK TEVDVRIIDDEVTIKLVQ+KKI+CLLF ++VLD+
Sbjct: 342 EVDQSCFNKNNNNSLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQ 401
Query: 475 LQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQYA-AVP 526
LQLDLHHVAGG IG++YSFLFNTKI EGS VYA IA+ L+EV++KQY AVP
Sbjct: 402 LQLDLHHVAGGQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVEKQYMEAVP 454
Score = 109 (43.4 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 50/187 (26%), Positives = 73/187 (39%)
Query: 68 DNHPKMYEETGCFDPNSMAEGG-DDGISQSVKHHKEDDAAV------SAIELELQKHLAF 120
+ +YEE GCFDPN+ AE + SQ+ V S +E+++ F
Sbjct: 3 EERESLYEEMGCFDPNTPAEVTVESSFSQAEPPPPPPQVLVAGSTSNSNCSVEVEELSEF 62
Query: 121 NVEDTHTQXXXXXXXXXXXXDPANQNHQILPPYEHSHSNWDSGVVSADHMGGFDQNEN-D 179
++ P PP + H+N + S H Q+ N D
Sbjct: 63 HLSPQDCPQASSTPLQFHINPPPPPP----PPCDQLHNNLIHQMAS--HQ---QQHSNWD 113
Query: 180 QSQQSFINTDISSSFAQSQTPPLLNLLQFPRCTTSSMLPPNSSISFTNPDHHFPVPPPTS 239
Q F+N +S+ TP LL+LL PRC+ LPPN S P + +S
Sbjct: 114 NGYQDFVNLGPNSA----TTPDLLSLLHLPRCS----LPPNHHPSSMLPTSFSDIMSSSS 165
Query: 240 TD-VLYD 245
V+YD
Sbjct: 166 AAAVMYD 172
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 535 (193.4 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/198 (55%), Positives = 142/198 (71%)
Query: 327 RRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVN 386
R+ K K F TER+RR +F LK+L+PNPTKNDRAS+VG+AI+YIKELLRT++
Sbjct: 207 RKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTID 266
Query: 387 ELKLLVXXXXXXXXXXXXXXXXXXXX-GMKPLVDPA-DQSYNSSLRSSWLQRKSKDTEVD 444
E KLLV +V+ N++LR SWL+RKSK T+VD
Sbjct: 267 EFKLLVEKKRVKQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVD 326
Query: 445 VRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSS 504
VRIIDDEVTIK+VQ+KKI+CLLFVS+V+D+L+LDLHHVAG IG+++SFLFN KI EGSS
Sbjct: 327 VRIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEGSS 386
Query: 505 VYAGSIANKLIEVMDKQY 522
VYA +IA++++EV+ KQY
Sbjct: 387 VYASAIADRVMEVLKKQY 404
Score = 89 (36.4 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 44/181 (24%), Positives = 66/181 (36%)
Query: 73 MYEETGCFDPNSMAE-GGDDGISQSVKHHKEDDAAVSAIELELQKHLAFNVEDTHTQXXX 131
M+EE GCFDPN+ AE + S S E ++ I + +
Sbjct: 6 MFEEIGCFDPNAPAEMTAESSFSPS-----EPPPTITVIGSNSNSNCSLEDLSAFHLSPQ 60
Query: 132 XXXXXXXXXDPANQNH-QILPPYEHSHSNWDSGVVSADHMGGFDQNENDQSQQSFINTDI 190
A+Q H P +H + + D N D Q F+N
Sbjct: 61 DSSLPASASAYAHQLHINATPNCDHQFQSSMHQTLQ-DPSYAQQSNHWDNGYQDFVNLGP 119
Query: 191 SSSFAQSQTPPLLNLLQFPRCTTSSMLPPN---------SSISFTNPDHH--FPVPPPTS 239
+ + TP LL+LLQ PR + P+ SS++ +P H FP+ PP
Sbjct: 120 NHT-----TPDLLSLLQLPRSSLPPFANPSIQDIIMTTSSSVAAYDPLFHLNFPLQPPNG 174
Query: 240 T 240
+
Sbjct: 175 S 175
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 528 (190.9 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 116/241 (48%), Positives = 154/241 (63%)
Query: 292 DERDATGAFYEDGDVGVHLDNRVLEFSRDLGCI-GRRRETAGKPTKHFATERQRREQLNG 350
DERD GD+ +D+R +F L C G+ GK +FATER+RREQLN
Sbjct: 223 DERDVIIGV-GSGDLFQEIDDR--QFDSVLECRRGKGEFGKGKGKANFATERERREQLNV 279
Query: 351 KFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVXXXXXXXXXXXX------ 404
KF+ L+ L PNPTKNDRAS+VGDAIEYI EL RTV ELK+LV
Sbjct: 280 KFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQKRHGNNRRKVLKLDQE 339
Query: 405 XXXXXXXXGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDC 464
M+P+ D D + ++RSSW+QR+SK+ VDVRI+DDEV IKL ++KK +
Sbjct: 340 AAADGESSSMRPVRDDQDNQLHGAIRSSWVQRRSKECHVDVRIVDDEVNIKLTEKKKANS 399
Query: 465 LLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQYAA 524
LL ++VLDE QL+L HV GG IGD++ F+FNTK+ EGS+VYA ++A KL++ +D Q+ A
Sbjct: 400 LLHAAKVLDEFQLELIHVVGGIIGDHHIFMFNTKVSEGSAVYACAVAKKLLQAVDVQHQA 459
Query: 525 V 525
+
Sbjct: 460 L 460
Score = 69 (29.3 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 34/140 (24%), Positives = 56/140 (40%)
Query: 100 HKEDDAAVSA--IELELQKHLAFNVEDTHTQXXXXXXXXXXXXDPANQ-NHQI------- 149
H + A S+ ++LQK F V T+ N HQ+
Sbjct: 23 HDSNQAPASSENTSIDLQK---FKVHPYSTEALSNTANLAEAARAINHLQHQLEIDLEQE 79
Query: 150 LPPYEHSHSNWDSGVVSA-DHMGGFDQNENDQS---QQSFINTD--ISSSFAQSQTPPLL 203
+PP E + NWD + + DH+ +E+ Q+ +Q D + + + P LL
Sbjct: 80 VPPVETA--NWDPAICTIPDHIINHQFSEDPQNILVEQQIQQYDSALYPNGVYTPAPDLL 137
Query: 204 NLLQFPRCTTSSMLPPNSSI 223
NL+Q CT + P +S+
Sbjct: 138 NLMQ---CTMAPAFPATTSV 154
>UNIPROTKB|Q5JNS0 [details] [associations]
symbol:P0706B05.43 "Os01g0293100 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002482 RefSeq:NP_001042795.1 UniGene:Os.54828 GeneID:4325164
KEGG:osa:4325164 HOGENOM:HOG000071096 OMA:HPQCELL
ProtClustDB:CLSN2691354 Uniprot:Q5JNS0
Length = 379
Score = 271 (100.5 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 49/92 (53%), Positives = 76/92 (82%)
Query: 429 LRSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIG 488
+RS+++QR+SK+T VDVRI++D+V IKL +R++ CL SR LD+L+LDL H++GG IG
Sbjct: 287 IRSTYIQRRSKETFVDVRIVEDDVNIKLTKRRRDGCLAAASRALDDLRLDLVHLSGGKIG 346
Query: 489 DYYSFLFNTKIYEGSSVYAGSIANKLIEVMDK 520
D + ++FNTKI+ GS V+A ++A++LIEV+D+
Sbjct: 347 DCHIYMFNTKIHSGSPVFASAVASRLIEVVDE 378
Score = 156 (60.0 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 53/133 (39%), Positives = 66/133 (49%)
Query: 270 HGYSFPASASRAAANSLFGEIGDERDATGAFYEDGDVGVHLDNRVLEFS-----RDLGCI 324
+G +P +A+ AAA + G R A + G V F R G
Sbjct: 102 YGGHYPPAAAAAAATEAYFR-GGPRTAGSSSLVFGPADDESAFMVGPFESSPTPRSGGGR 160
Query: 325 GRRRETAG----KPTKHFAT-ERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIK 379
R R TAG P E+QRR +L K+ AL L+PN TK DRA+V+ DAIEYI+
Sbjct: 161 KRSRATAGFHGGGPANGVEKKEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQ 220
Query: 380 ELLRTVNELKLLV 392
EL RTV EL LLV
Sbjct: 221 ELGRTVEELTLLV 233
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
K ++ F TER+RR N +F LK+L+PNPTK AS+V D I YI EL R V+ELK LV
Sbjct: 20 KKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYLV 79
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 59/229 (25%), Positives = 101/229 (44%)
Query: 295 DATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKA 354
+ +G YE ++ + E S +G G+ ++ G P K+ ER+RR++LN +
Sbjct: 270 EVSGLNYESDEINE--SGKAAE-SVQIGGGGKGKKK-GMPAKNLMAERRRRKKLNDRLYM 325
Query: 355 LKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVXXXXXXXXXXXXXXXXXXXXGM 414
L+ +VP +K DRAS++GDAI+Y+KELL+ +N+L
Sbjct: 326 LRSVVPKISKMDRASILGDAIDYLKELLQRINDLH-------NELESTPPGSLPPTSSSF 378
Query: 415 KPLVDPADQSYNSSLR-----SSWLQRKSKDTEVDVRIIDDE-VTIKLVQRKKIDCLLFV 468
PL P Q+ + ++ SS K + V+VR+ + V I + ++ LL
Sbjct: 379 HPLT-PTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLAT 437
Query: 469 SRVLDELQLDLHHVAGGHIGDYYSFLFNTK-IYEGSSVYAGSIANKLIE 516
+ LD L LD+ + +F + EG + I L +
Sbjct: 438 MKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFD 486
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/62 (45%), Positives = 46/62 (74%)
Query: 328 RETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNE 387
++ G+P+K+ ER+RR++LN + L+ +VP TK DR S++GDAI+Y+KELL +N+
Sbjct: 143 KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINK 202
Query: 388 LK 389
L+
Sbjct: 203 LQ 204
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/111 (44%), Positives = 64/111 (57%)
Query: 274 FPASASRAAANSLFGEIGDE-RDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAG 332
F A++SRA+ N+ GE G E DA GA E G+ NR R G RR G
Sbjct: 383 FSAASSRASENNSDGEGGGEWADAVGAD-ESGN------NR----PRKRG----RRPANG 427
Query: 333 KPT--KHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
+ H ERQRRE+LN +F AL+ +VPN +K D+AS++GDA+ YI EL
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 332 GKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
G P K+ ER+RR++LN + L+ +VP +K DRAS++GDAIEY+KELL+ +N+L+
Sbjct: 332 GMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQ 389
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 154 (59.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 27/64 (42%), Positives = 47/64 (73%)
Query: 326 RRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTV 385
+ ++ G+P+K+ ER+RR++LN + L+ +VP +K DR S++GDAI+Y+KELL +
Sbjct: 168 KSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKI 227
Query: 386 NELK 389
N+L+
Sbjct: 228 NKLQ 231
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 157 (60.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 47/157 (29%), Positives = 74/157 (47%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
+P H ERQRRE+LN +F AL+ +VPN +K D+AS++GDAI YI EL + K++
Sbjct: 449 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL-----KSKVVK 503
Query: 393 XXXXXXXXXXXXXXXXXXXXGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEV 452
G K D S SS K E++V+II +
Sbjct: 504 TESEKLQIKNQLEEVKLELAGRKASASGGDMS------SSCSSIKPVGMEIEVKIIGWDA 557
Query: 453 TIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGD 489
I++ K+ + L +L+L+++H + + D
Sbjct: 558 MIRVESSKRNHPAARLMSALMDLELEVNHASMSVVND 594
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/157 (31%), Positives = 75/157 (47%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
+P H ERQRRE+LN +F +L+ +VPN +K D+AS++GDAI YI EL + KL
Sbjct: 412 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINEL-----KSKLQQ 466
Query: 393 XXXXXXXXXXXXXXXXXXXXGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEV 452
K A + +S+ S+ S + E+DV+II +V
Sbjct: 467 AESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDST---ASSIEMEIDVKIIGWDV 523
Query: 453 TIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGD 489
I++ KK L EL L+++H + + D
Sbjct: 524 MIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVND 560
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 145 (56.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 43/141 (30%), Positives = 70/141 (49%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVXXXX 396
H ER+RRE+L +F AL LVP K D+ASV+GDA+++IK L V EL+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELE------- 205
Query: 397 XXXXXXXXXXXXXXXXGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKL 456
K ++D +QS++SS + E++VR D++V IK+
Sbjct: 206 -EQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLP--EIEVRFSDEDVLIKI 262
Query: 457 VQRKKIDCLLFVSRVLDELQL 477
+ K+ L + +++L +
Sbjct: 263 LCEKQKGHLAKIMAEIEKLHI 283
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 161 DSGVVSADHMGGFDQNENDQSQQSF-----INTDISSSFAQSQTPPLLNLLQFPRCTTSS 215
++ ++ HM E ++Q F N D S PP +L+ + SS
Sbjct: 16 ENSIIQQFHMNSI-VGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPP--KILETTYISPSS 72
Query: 216 MLPPNS 221
LPPNS
Sbjct: 73 HLPPNS 78
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/202 (22%), Positives = 88/202 (43%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNP--TKNDRASVVGDAIEYIKEL----- 381
E + H A ER RR+Q+N + L+ L+P + D+AS++G AIE+++EL
Sbjct: 191 EVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQ 250
Query: 382 -LRTVNELKLL--VXXXXXXXXXXXXXXXXXXXXGMKPLV---DPADQSYNSSLRSSWLQ 435
L + ++L +PL+ + + LR +
Sbjct: 251 CLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAE 310
Query: 436 RKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLF 495
KS +V+V+++ + IK++ R++ L+ L++L L + H + + F
Sbjct: 311 NKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSF 370
Query: 496 NTKIYEGSSVYAGSIANKLIEV 517
N KI + A IA+ + ++
Sbjct: 371 NVKITSETRFTAEDIASSIQQI 392
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 54/223 (24%), Positives = 90/223 (40%)
Query: 286 LFGEIGDERDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRR 345
L +G+E T E H R R C + E + H A ER RR
Sbjct: 71 LIPSLGEELGLTAIDVESHPPPQHRRKR----RRTRNC-KNKEEIENQRMTHIAVERNRR 125
Query: 346 EQLNGKFKALKDLVPNP--TKNDRASVVGDAIEYIKELLRTVNELKLLVXXXXXXXXXXX 403
+Q+N L+ L+P+ + D+AS+VG AI Y+KEL + ++
Sbjct: 126 KQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSME---PKRTRTHDPKG 182
Query: 404 XXXXXXXXXGMKPLVDPAD-QSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKI 462
G P D Y++ S + S E++V + + IK++ +KK
Sbjct: 183 DKTSTSSLVG--PFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANIKIMTKKKP 240
Query: 463 DCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSSV 505
LL + L L+L L H+ + + + + ++ EGS +
Sbjct: 241 RQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQL 283
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 39/118 (33%), Positives = 63/118 (53%)
Query: 273 SFPASASRAAANSLFGEIGDERDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAG 332
+FPA+A+ + + G E G F D + G + +R G G +R A
Sbjct: 52 AFPAAAAALGQQQV--DCGGE---LGGFC-DSEAGGSSEPEAAAGARPRGGSGSKRSRAA 105
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
+ H +E++RR ++N K KAL+ L+PN K D+AS++ +AIEY+K+L V L +
Sbjct: 106 EV--HNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 161
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 53/202 (26%), Positives = 87/202 (43%)
Query: 326 RRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTV 385
+++ G K+ ER+RR++LN + AL+ LVP TK DRAS++GDAI Y+KEL
Sbjct: 304 KKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEA 363
Query: 386 NELKLLVXXXXXXXXXXXXXXXXXXXXGMKPLVDPADQSYNSS---------LRSSWLQR 436
EL+ + G S NS+ L +S +
Sbjct: 364 KELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKG 423
Query: 437 KSKDTEVDVRIIDD-EVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLF 495
+ + +VDV +D E +K++ K + LD L L++ + S +F
Sbjct: 424 QEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVF 483
Query: 496 NTKIYEGSSVYAGSIANKLIEV 517
+ + V A + N L+E+
Sbjct: 484 KVEKNDNEMVQAEHVRNSLLEI 505
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 144 (55.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 48/199 (24%), Positives = 92/199 (46%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNPT---KNDRASVVGDAIEYIKELLRTV 385
E + H A ER RR Q+N +L+ L+P P+ + D+AS+VG AI++IKEL + +
Sbjct: 109 EVENQRMTHIAVERNRRRQMNEHLNSLRSLMP-PSFLQRGDQASIVGGAIDFIKELEQLL 167
Query: 386 NELKLLVXXXXXXXXXXXXXXXXXXXXGMKPLVDPADQSYNSSLRSSWLQR--KSKDTEV 443
L+ + + S +++ + + R TEV
Sbjct: 168 QSLE---AEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEV 224
Query: 444 DVRIIDDEVTIKL-VQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEG 502
+ +I + V++K+ +R K L + + +EL+L + H+ D+ + FN K+ +G
Sbjct: 225 EATVIQNHVSLKVRCKRGKRQILKAIVSI-EELKLAILHLTISSSFDFVIYSFNLKMEDG 283
Query: 503 SSV-YAGSIANKLIEVMDK 520
+ A IA + ++ ++
Sbjct: 284 CKLGSADEIATAVHQIFEQ 302
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 151 (58.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTV 385
+P H ERQRRE+LN +F AL+ +VPN +K D+AS++GDAI YIKEL V
Sbjct: 392 EPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKV 444
Score = 41 (19.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 426 NSSLRSSWLQRKSKDTEVDVRIIDDEVTIKLV 457
+ SL S + EVD++ +++EV ++++
Sbjct: 455 DKSLSESNTITVEESPEVDIQAMNEEVVVRVI 486
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 144 (55.7 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
+P H ERQRRE+LN +F AL+ +VPN +K D+AS++GDAI YI EL
Sbjct: 521 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINEL 569
Score = 47 (21.6 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 442 EVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGD 489
E++ +I+ E I++ K+ + L EL LD++H + + D
Sbjct: 616 EIEAKILGLEAMIRVQCHKRNHPAARLMTALRELDLDVYHASVSVVKD 663
Score = 43 (20.2 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 182 QQSFINTDISSSFAQSQTPPLLNLLQFPRCTTSSMLPPNSSISFTNPDHHFPVPPP 237
+ S DIS S + PP + F +TS+ L N S S P P PP
Sbjct: 283 KDSISAADISVS--KPPPPPPHQIQHFENGSTST-LTENPSPSVHAPTPSQPAAPP 335
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 44/182 (24%), Positives = 79/182 (43%)
Query: 327 RRETAGKPTKHFATERQRREQLNGKFKALKDLVPN--PTKNDRASVVGDAIEYIKELLRT 384
+ E + H A ER RR+Q+N L+ L+P + D+AS+VG AI Y+KEL
Sbjct: 117 KEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHH 176
Query: 385 VNELKLLVXXXXXXXXXXXXXXXXXXXXGMKPLVDP-ADQSYNSSLRSSWLQRKSKDTEV 443
+ ++ V P D A Y++ R + E+
Sbjct: 177 LQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSN--RPTSAAAAEGMAEI 234
Query: 444 DVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGS 503
+V +++ ++K++ +K+ LL + + L+L L H+ D + + K+ EGS
Sbjct: 235 EVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGS 294
Query: 504 SV 505
+
Sbjct: 295 QL 296
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 141 (54.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
+P H ERQRRE+LN +F +L+ +VPN +K D+AS++GDAI YI EL
Sbjct: 413 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISEL 461
Score = 49 (22.3 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 161 DSGVVSADHM--GGFDQNENDQSQQSFINTDISSSFAQSQTPPLL 203
DSG+V+A M GG D N SQ I+ + S ++ P +L
Sbjct: 286 DSGLVAAPVMNNGGNDSTSNSDSQP--ISKLCNGSSVENPNPKVL 328
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 139 (54.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/115 (33%), Positives = 63/115 (54%)
Query: 276 ASASRAAANSLFGEIGDERDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPT 335
+S +R +++S+ G G+E D E+G V +D S +R A +
Sbjct: 145 SSGTRVSSSSV-GASGNETDEYDCESEEGGEAV-VDEAPSSKSGPSSRSSSKRCRAAEV- 201
Query: 336 KHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
H +E++RR ++N K KAL+ L+PN K D+AS++ +AIEY+K+L V L +
Sbjct: 202 -HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 220 NSSISFTNPDHHFPVPPPTSTDV 242
+SS+ T +HH PP +S ++
Sbjct: 27 SSSVYDTRINHHLHHPPSSSDEI 49
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 131 (51.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
H ER+RRE+LN KF L+ +VP TK D+ S++GD I Y+ L + V+EL+
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
Score = 56 (24.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 430 RSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLD 478
R+ +RK+ + EV+V II+++V +++ + LL + +VL EL ++
Sbjct: 426 RTRTCKRKTSE-EVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIE 473
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 322 GCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
G + R + G P+K+ ER+RR++LN + L+ +VP +K DR S++GD I+Y+KEL
Sbjct: 168 GGVHPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKEL 227
Query: 382 LRTVNELK 389
+ L+
Sbjct: 228 TERIKTLE 235
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 133 (51.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 321 LGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKE 380
+G G + AG K+ ER RR +LN K AL+ +VPN TK D+AS++ DAIEYI+
Sbjct: 78 MGGGGGGGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQR 137
Query: 381 L 381
L
Sbjct: 138 L 138
Score = 43 (20.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 442 EVDVRIIDDEVTIKLVQ-RKKIDCLLFVSRVLDELQL 477
E+ V + D V + V K+ D + V R L+EL+L
Sbjct: 221 ELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRL 257
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 145 (56.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 40/94 (42%), Positives = 51/94 (54%)
Query: 296 ATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKAL 355
A G E G G L E D G GR + K+ ER+RR++LNG L
Sbjct: 247 AGGGVAESGSEGRKLHGGDPEDDGD-G-EGRSGGAKRQQCKNLEAERKRRKKLNGHLYKL 304
Query: 356 KDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
+ LVPN TK DRAS++GDAI+YI L + V EL+
Sbjct: 305 RSLVPNITKMDRASILGDAIDYIVGLQKQVKELQ 338
Score = 38 (18.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 18/94 (19%), Positives = 47/94 (50%)
Query: 440 DTEVDVRIID-DEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNT- 497
+ +++VR + +E+ ++++ K + + ++ L L++ +V ++ Y + + N
Sbjct: 415 EPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINV---NVTTYKTLVLNVF 471
Query: 498 KIYEGSS---VYAGSIANKLIEVMDKQYAAVPPT 528
++ S V A + + L+EV + Y V P+
Sbjct: 472 RVMVRDSEVAVQADRVRDSLLEVTRETYPGVWPS 505
Score = 37 (18.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 148 QILPPYEHSHSNWDSGVVSADHM-GGFDQN 176
Q PP E WD G + M GG N
Sbjct: 164 QAWPPPETPSFQWDGGADAQRLMYGGSSLN 193
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
H +E++RR ++N K KAL+ L+PN +K D+AS++ DAIEY+K+L V L +
Sbjct: 37 HNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 90
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 332 GKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
G P+K+ ER+RR++LN + L+ +VP +K DR S++GD I Y+KEL+ + L++
Sbjct: 192 GAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQV 250
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 128 (50.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLL 391
H +E++RR ++N K KAL+ L+PN K D+AS++ +AIEY+K+L V L ++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVM 152
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 123 (48.4 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 22/45 (48%), Positives = 36/45 (80%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
H +ER+RR+++N K KAL++L+PN TK D+ S++ +AI+Y+K L
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSL 62
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 334 PTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
P H ERQRRE+LN +F L+ VP ++ D+AS++ DA++YI EL R V L+
Sbjct: 92 PIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLE 147
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVXXXX 396
H ER+RRE+L +F AL L+P K D+ASV+GDAI++IK L +V E +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 397 XXXXXXXXXXXXXXXXGMKPLVDPA-DQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIK 455
+P + D + NSS SS L E++VR+ +V IK
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSS--SSNLP------EIEVRVSGKDVLIK 238
Query: 456 LVQRKKIDCLLFVSRVLDELQLDL 479
++ K+ ++ + +++L L +
Sbjct: 239 ILCEKQKGNVIKIMGEIEKLGLSI 262
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 127 (49.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 42/174 (24%), Positives = 76/174 (43%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNP--TKNDRASVVGDAIEYIKELLRTVN 386
E + H A ER RR +N +L+ L+P+ + D+A+VVG AI+Y+K+L + +
Sbjct: 111 EAENQRMTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQL- 169
Query: 387 ELKLLVXXXXXXXXXXXXXXXXXXXXGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVR 446
+ L G+ V P SY+ + S + D E
Sbjct: 170 -VALQAAAAERSGVGVVAAAATAASDGV--FVSPQYTSYSEARGGSGV-----DVEATAA 221
Query: 447 IIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIG-DYYSFLFNTKI 499
+ V +++ R+ L+ +++L+L + H+A +G D + FN K+
Sbjct: 222 V-GGHVRVRVAGRRWTGRLVRAVAAMEDLRLTVLHLAVTSVGHDAVVYCFNLKV 274
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/57 (24%), Positives = 22/57 (38%)
Query: 163 GVVSADHMGGFDQNENDQSQQSFINTDISSSFAQSQTPPLLNLLQFPRCTTSSMLPP 219
G + AD GG D + + +F + PP+ +L C T + PP
Sbjct: 30 GAMEADGGGGGDGRKRHAAAAAFASC--------CPCPPVADLDLLESCVTQAAAPP 78
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 132 (51.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 291 GDERDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNG 350
G E D Y DGD D+ + D G R+ + ++ +ER+RR ++
Sbjct: 98 GGEEDEED--YNDGD-----DSSATTTNND----GTRKTKTDR-SRTLISERRRRGRMKD 145
Query: 351 KFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
K AL+ LVPN TK D+AS+VGDA+ Y++EL +LK
Sbjct: 146 KLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLK 184
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 67 PDNHPKMYEETGCFDPNSMAEGGDD 91
PD + E FD +S+ GG++
Sbjct: 77 PDLDSNVAESFRSFDGDSVRAGGEE 101
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 136 (52.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVXXXX 396
H E+QRRE+LN +F AL+ +VP ++ D+AS++ DA+ YI+ L +++L+ +
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMK 309
Query: 397 XXXXXXXXXXXXXXXXGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKL 456
P+ Y + + S R S D EV V+I+ +E I+
Sbjct: 310 MTETDKLDNSSSNTS--------PSSVEYQVNQKPSKSNRGS-DLEVQVKIVGEEAIIR- 359
Query: 457 VQRKKID 463
VQ + ++
Sbjct: 360 VQTENVN 366
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 171 GGFDQNENDQSQQSFINTDI 190
G F N+N+ SQ+++ I
Sbjct: 74 GHFCGNKNNNSQENYTTNSI 93
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
H +ER+RRE+LN F LK LVP+ K D+AS++ + I Y+KEL R V EL+
Sbjct: 189 HVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELE 241
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 331 AGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
A + +H ER+RRE+L+ +F AL +VP K D+ASV+GDAI+Y+K+L V L+
Sbjct: 176 ASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLE 234
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 35/104 (33%), Positives = 56/104 (53%)
Query: 278 ASRAAANSLFGEIGDERDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKH 337
A+RAA S G G + F + V + V + +R +R T H
Sbjct: 175 AARAAGASSSGGSGSGSGSYPLFKRGREELVDSLSEVADETRPSKRPAAKRRTRAAEV-H 233
Query: 338 FATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
+ER+RR+++N K +AL++LVP+ K D+AS++ +AIEY+K L
Sbjct: 234 NLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSL 277
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 327 RRETAGKPTKHFATERQRREQLNGKFKALKDLVPNP--TKNDRASVVGDAIEYIKELLRT 384
R ET + H A ER RR Q+N L+ L+P P + D+AS+VG AIE++KEL +
Sbjct: 82 REETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQ 141
Query: 385 VNELK 389
+ L+
Sbjct: 142 LQSLE 146
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
KP H ER RRE+LN +F AL+ +VPN +K D+ S++ DA+ YI EL ++L
Sbjct: 340 KPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVEL 397
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNEL 388
H ER+RR+++NG L+ L+PN TK D+AS++ + IE++KEL R + +
Sbjct: 125 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAM 176
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 125 (49.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 271 GYSFPASASRAAANSLFGEIGDERDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRET 330
G+ F A+A+ + G A G+ G + + +LG + R
Sbjct: 43 GFGFEAAAAPVVTRQ---QRGGAAAAEGSSRGGGGKPAVVSGLLGSLQAELGRVTAREIM 99
Query: 331 AGKPT----KHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLR 383
K H ER+RR+++NG L+ L+PN TK D+AS++ + IE++KEL R
Sbjct: 100 DAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKR 156
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 126 (49.4 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNEL 388
E + H E++RRE+LN +F L+ ++P+ K D+ S++ D IEY++EL R V EL
Sbjct: 434 EARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
Query: 389 K 389
+
Sbjct: 494 E 494
Score = 47 (21.6 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 450 DEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFL-FNTKIYEGSSVYA- 507
+EV I+L + LL + V+ +L LD H V GD L N K ++GS +
Sbjct: 566 NEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSS-TGDGLLCLTVNCK-HKGSKIATP 623
Query: 508 GSIANKLIEV 517
G I L V
Sbjct: 624 GMIKEALQRV 633
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 121 (47.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 330 TAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELL 382
T+ +K+ +ER RR++LN + AL+ +VPN +K D+ASV+ D+I+Y++EL+
Sbjct: 48 TSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELI 100
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTV 385
H ERQRRE+LN +F AL+ +VPN +K D+AS++ DAI YI ++ + +
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKI 369
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 309 HLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRA 368
+++N+ E +RD +R A H +ER+RR+++N KAL++L+P TK DR+
Sbjct: 258 NVENQGTEEARD-STSSKRSRAA---IMHKLSERRRRQKINEMMKALQELLPRCTKTDRS 313
Query: 369 SVVGDAIEYIKEL 381
S++ D IEY+K L
Sbjct: 314 SMLDDVIEYVKSL 326
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 125 (49.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/61 (36%), Positives = 42/61 (68%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNEL 388
+T + H +E++RRE+LN +F L+ ++P+ +K D+ S++ D IEY+++L + V EL
Sbjct: 398 DTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 457
Query: 389 K 389
+
Sbjct: 458 E 458
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 448 IDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFL-FNTKIYEGSSVY 506
+ +EV I+L + LL + V+ +L LD H V GD L N K ++G+ +
Sbjct: 523 LGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSS-TGDGLLCLTVNCK-HKGTKIA 580
Query: 507 A-GSIANKLIEV 517
G I L V
Sbjct: 581 TTGMIQEALQRV 592
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 123 (48.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
H ER+RRE++N +F L ++P K D+A+++GDA++Y+KEL V L+
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLE 220
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/42 (21%), Positives = 23/42 (54%)
Query: 442 EVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVA 483
E++VR+ + V +++ L+ + ++EL+L + H +
Sbjct: 256 EIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTS 297
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 24/58 (41%), Positives = 42/58 (72%)
Query: 324 IGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
+G +R + + H +ER+RR+++N K +AL++L+PN K D+AS++ +AIEY+K L
Sbjct: 337 LGSKRSRSAEV--HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL 392
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 309 HLDNRVLEFSRDLGCIGRRRETAGKPTK----HFATERQRREQLNGKFKALKDLVPNPTK 364
H D V S +G +R + + ++ H +ER+RR+++N + KAL++L+P+ +K
Sbjct: 231 HTDESV-SLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK 289
Query: 365 NDRASVVGDAIEYIKEL 381
D+AS++ +AI+Y+K L
Sbjct: 290 TDKASILDEAIDYLKSL 306
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVN 386
H +ER+RR+++N + K L+ LVPN +K D+AS++ + IEY+K+L V+
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVS 267
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 322 GCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
G R+R A + H ER+RRE++N + K L+ L+P K+ + S++ D IEY+K L
Sbjct: 142 GSTSRKRSRAAE--MHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSL 199
Query: 382 LRTVNE 387
+N+
Sbjct: 200 EMQINQ 205
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 109 (43.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 337 HFATERQRREQLNGKFKALKDLVPN--PTKNDRASVVGDAIEYIKELLRTVNELK 389
H A ER RR Q+N K L+ L P + D+AS++G AI++IKEL + L+
Sbjct: 3 HIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLE 57
Score = 45 (20.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 443 VDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLH 480
+++ +DD V V + +DC L V D+L +++H
Sbjct: 177 LNITTMDDTVLYSFVLKIGLDCHLSV----DDLAMEVH 210
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 330 TAGKPTK-HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNEL 388
T G K H +ER+RRE+LN F LK L+P+ K D+AS++ + I Y+K L + V EL
Sbjct: 371 TPGSNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKEL 430
Query: 389 K 389
+
Sbjct: 431 E 431
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
H +ER+RR+++N K +AL++L+PN K D+AS++ +AIEY+K L V + +
Sbjct: 317 HNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 370
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 20/54 (37%), Positives = 37/54 (68%)
Query: 336 KHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
+H ER+RRE++N +F L ++P K D+A+++ DA+ Y+KE+ ++EL+
Sbjct: 192 EHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE 245
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 308 VHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDR 367
V +D +V +D G RRE +H ER+RR++LN + AL L+P K D+
Sbjct: 105 VSMDQKVGSKRKDCVNNGGRREPH-LLKEHVLAERKRRQKLNERLIALSALLPGLKKTDK 163
Query: 368 ASVVGDAIEYIKELLRTVNELK 389
A+V+ DAI+++K+L V +L+
Sbjct: 164 ATVLEDAIKHLKQLQERVKKLE 185
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNPT--KNDRASVVGDAIEYIKEL 381
E + H A ER RR Q+N L+ L+P P K D+AS+VG AI++IKEL
Sbjct: 82 EAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKEL 136
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 27/88 (30%), Positives = 51/88 (57%)
Query: 295 DATGAFYEDGDVGV-HLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFK 353
DA D+G+ D++ + RR A + H +ER+RR+++N + K
Sbjct: 220 DADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEV--HNLSERRRRDRINERMK 277
Query: 354 ALKDLVPNPTKNDRASVVGDAIEYIKEL 381
AL++L+P+ ++ D+AS++ +AI+Y+K L
Sbjct: 278 ALQELIPHCSRTDKASILDEAIDYLKSL 305
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 116 (45.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 331 AGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNEL 388
A +K+ A ER RR++LN K AL+ +VP TK D+AS+V DAI +I++L +L
Sbjct: 92 AAASSKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQL 149
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 175 QNENDQSQQSFINTDISSSFAQSQTPPLLNL 205
+ E D+S S +A S +P ++NL
Sbjct: 52 EKEYDESLSELYAYTSQSRYADSSSPDVVNL 82
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 324 IGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLR 383
I RR A P H ER RRE++ + KAL++LVPN K D+AS++ + I+Y+K L
Sbjct: 138 IRARRGQATDP--HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQL 195
Query: 384 TVNELKL 390
V L +
Sbjct: 196 QVKVLSM 202
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 21/45 (46%), Positives = 36/45 (80%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
H +ER+RR+++N + KAL++L+P K+D+AS++ +AIEY+K L
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSL 333
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 337 HFATERQRREQLNGKFKALKDLVP--NPTKNDRASVVGDAIEYIKELLRTVNELK 389
H A ER RR Q+N K+L+ L P + D+AS++G IE+IKEL + V L+
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLE 57
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 326 RRRETAGKPTK-HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRT 384
R R G+ T H ER RRE++ + K+L++LVPN K D+AS++ + IEY++ L
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQ 157
Query: 385 VNELKL 390
V L +
Sbjct: 158 VKVLSM 163
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 115 (45.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 322 GCIGRRRETAGKPT---KHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYI 378
G G R T+G +H +ER+RRE+LN F+AL+ L+P TK D+ASV+ A E +
Sbjct: 272 GSGGGGRYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQL 331
Query: 379 KELLRTVNEL 388
L +++L
Sbjct: 332 SSLQGEISKL 341
Score = 46 (21.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 202 LLNLLQFPRCTTSSM----LPPNSSISFTNPDHHFPV 234
L L+ P TT ++ LPP + I+ +P H P+
Sbjct: 139 LFPLIPKPSTTTEAVNVPVLPPLAPINMIHPQHQEPL 175
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00064
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNEL 388
H ER+RRE++N L+ ++PN TK D+AS++ + I+++KEL R +++
Sbjct: 136 HSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI 187
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 105 (42.0 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 328 RETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
R A P +A R+RRE++N + K L+ LVPN TK D ++++ DA+ Y+K L
Sbjct: 136 RGIASDPQSLYA--RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFL 187
Score = 45 (20.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 191 SSSFAQSQTPPLLNLLQFPRCTT--SSML-PPNSSISFTNPDHHFP 233
+ +F + LL + F +C++ SS PN + F++ D FP
Sbjct: 3 NEAFVDGELESLLGMFNFDQCSSNESSFCNAPNETDVFSSDDF-FP 47
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLR 383
H ER+RRE++N L+ ++PN TK D+AS++ + I+++KEL R
Sbjct: 178 HSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKR 224
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 335 TKHFATERQRREQLNGKFKALKDLVP-NPTKNDRASVVGDAIEYIKELLRTVNELKL 390
+KH ATE++RR ++N +F+ L+DL+P N K D+AS + + IEYI+ L V + ++
Sbjct: 224 SKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEV 280
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
H +ER+RRE+L F LK +VP+ K D+AS++ + I Y+KEL + V EL+
Sbjct: 245 HVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELE 297
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 318 SRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVP---NPTKNDRASVVGDA 374
SR+ GRR + + +KH TE++RR ++N +F++L D++P N K D+AS + +
Sbjct: 20 SRNDSSTGRRNRNSCR-SKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEV 78
Query: 375 IEYIKELLRTVN 386
IEYI L V+
Sbjct: 79 IEYIHFLQEKVH 90
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 332 GKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELK 389
G H ERQRRE+LN +F L+ VP ++ D+AS++ DA YI EL V L+
Sbjct: 107 GPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLE 164
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 116 (45.9 bits), Expect = 0.00099, P = 0.00099
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 322 GCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
G R+R + H ER+RRE++N K K L+ L+P K+ + S + DAIEY+K L
Sbjct: 247 GSTSRKRSRTAE--MHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSL 304
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 532 463 0.00096 118 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 75
No. of states in DFA: 616 (65 KB)
Total size of DFA: 284 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.19u 0.10s 39.29t Elapsed: 00:00:02
Total cpu time: 39.19u 0.10s 39.29t Elapsed: 00:00:02
Start: Fri May 10 08:49:00 2013 End: Fri May 10 08:49:02 2013