BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009555
(532 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 196/495 (39%), Positives = 264/495 (53%), Gaps = 107/495 (21%)
Query: 73 MYEETGCFDPNSMAEGGDDGISQ---------------SVKHHKEDDAAVSAIELELQKH 117
MYEE+ CFDPNSM + + S + +DD + ++
Sbjct: 1 MYEESSCFDPNSMVDNNGGFCAAETTFTVSHQFQPPLGSTTNSFDDDLKLPTMDEFSVFP 60
Query: 118 LAFNVEDTHTQSISINSNTHSIHDPANQNHQILPPYEHSHSNWDSGVVSADHMGGFDQNE 177
++ ++ TQ+ +I++N H I NQ Q SNW G + N
Sbjct: 61 SVISLPNSETQNQNISNNNHLI----NQMIQ--------ESNW----------GVSEDNS 98
Query: 178 NDQSQQSFINTDISSSFAQSQTPPLLNLLQFPRCTTSSMLPPNSSISFTNPDHHFPVPPP 237
N F+NT ++ + P LL+LL PRC SM P+S I
Sbjct: 99 N-----FFMNTSHPNT-TTTPIPDLLSLLHLPRC---SMSLPSSDIM------------- 136
Query: 238 TSTDVLYDPLFHLNLPPQPQPPLFRELFQSIPHGYSFPASASRAAANSLFGEIGDERDAT 297
+ YDPLFHLNLPPQP P + + G + R +N +GDE +
Sbjct: 137 AGSCFTYDPLFHLNLPPQP-PLIPSNDYSGYLLGIDTNTTTQRDESN-----VGDENN-- 188
Query: 298 GAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKD 357
D+ ++EFS+++ RR+ + K F TER+RR LN +++ALK
Sbjct: 189 ---------NAQFDSGIIEFSKEI----RRKGRGKRKNKPFTTERERRCHLNERYEALKL 235
Query: 358 LVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKRCVRERRKRHRTEDDDEGM--- 414
L+P+P+K DRAS++ D I+YI EL R V+ELK LVE+KRC RH+ + D+
Sbjct: 236 LIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERKRC----GGRHKNNEVDDNNNNK 291
Query: 415 -------------------KPLVDPADQ-SYNSSLRSSWLQRKSKDTEVDVRIIDDEVTI 454
KP D DQ S N+SLR SWLQRKSK TEVDVRI+DDEVTI
Sbjct: 292 NLDDHGNEDDDDDDENMEKKPESDVIDQCSSNNSLRCSWLQRKSKVTEVDVRIVDDEVTI 351
Query: 455 KLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKL 514
K+VQ+KKI+CLL VS+VLD+LQLDLHHVAGG IG++YSFLFNTKIYEGS++YA +IAN++
Sbjct: 352 KVVQKKKINCLLLVSKVLDQLQLDLHHVAGGQIGEHYSFLFNTKIYEGSTIYASAIANRV 411
Query: 515 IEVMDKQYAAVPPTS 529
IEV+DK Y A P S
Sbjct: 412 IEVVDKHYMASLPNS 426
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 253/483 (52%), Gaps = 97/483 (20%)
Query: 73 MYEETGCFDPNSMAEGGDD---------------GISQSVKHHKEDDAAVSAIELELQKH 117
M+EE GCFDPN+ AE + G + + ED +SA L Q
Sbjct: 6 MFEEIGCFDPNAPAEMTAESSFSPSEPPPTITVIGSNSNSNCSLED---LSAFHLSPQDS 62
Query: 118 LAFNVEDTHTQSISINSNTHSIHDPANQNHQIL--PPYEHSHSNWDSGVVSADHMGGFDQ 175
+ + IN+ + H + HQ L P Y ++WD+G
Sbjct: 63 SLPASASAYAHQLHINATPNCDHQFQSSMHQTLQDPSYAQQSNHWDNGY----------- 111
Query: 176 NENDQSQQSFINTDISSSFAQSQTPPLLNLLQFPRCTTSSMLPPNSSISFTNPDHHFPVP 235
Q F+N + + TP LL+LLQ PR S LPP F NP +
Sbjct: 112 -------QDFVNLGPNHT-----TPDLLSLLQLPR----SSLPP-----FANPSIQDIIM 150
Query: 236 PPTSTDVLYDPLFHLNLPPQPQPPLFRELFQSIPHGYSFPASASRAAANSLFGEIGDERD 295
+S+ YDPLFHLN P QP P+G + N + DE +
Sbjct: 151 TTSSSVAAYDPLFHLNFPLQP------------PNGSFMGVDQDQTETNQGVNLMYDEEN 198
Query: 296 ATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKAL 355
+LD+ + R+ K K F TER+RR +F L
Sbjct: 199 N------------NLDDGL-----------NRKGRGSKKRKIFPTERERRVHFKDRFGDL 235
Query: 356 KDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKRCVRERRKRHRTEDD--DEG 413
K+L+PNPTKNDRAS+VG+AI+YIKELLRT++E KLLVEKKR ++R+R DD DE
Sbjct: 236 KNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRV----KQRNREGDDVVDEN 291
Query: 414 MKPLVDPADQSY----NSSLRSSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVS 469
K + +Q N++LR SWL+RKSK T+VDVRIIDDEVTIK+VQ+KKI+CLLFVS
Sbjct: 292 FKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDEVTIKIVQKKKINCLLFVS 351
Query: 470 RVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYAGSIANKLIEVMDKQYAAVPPTS 529
+V+D+L+LDLHHVAG IG+++SFLFN KI EGSSVYA +IA++++EV+ KQY +
Sbjct: 352 KVVDQLELDLHHVAGAQIGEHHSFLFNAKISEGSSVYASAIADRVMEVLKKQYMEALSAN 411
Query: 530 CAY 532
Y
Sbjct: 412 NGY 414
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 197/502 (39%), Positives = 258/502 (51%), Gaps = 108/502 (21%)
Query: 78 GCFDPNSMAEGG-DDGISQSVKHHKEDDAAVS--------AIELELQKHLAFNVEDTHTQ 128
GCFDPN+ AE + SQ+ V+ ++E+E + +D
Sbjct: 13 GCFDPNTPAEVTVESSFSQAEPPPPPPQVLVAGSTSNSNCSVEVEELSEFHLSPQDCPQA 72
Query: 129 S-------ISINSNTHSIHDPANQN--HQILPPYEHSHSNWDSGVVSADHMGGFDQNEND 179
S I+ D + N HQ + ++ HSNWD+G
Sbjct: 73 SSTPLQFHINPPPPPPPPCDQLHNNLIHQ-MASHQQQHSNWDNGY--------------- 116
Query: 180 QSQQSFINTDISSSFAQSQTPPLLNLLQFPRCTTSSMLPPNSSISFTNPDHHFPVPPPT- 238
Q F+N +S+ TP LL+LL PRC+ LPPN HH PT
Sbjct: 117 ---QDFVNLGPNSA----TTPDLLSLLHLPRCS----LPPN---------HHPSSMLPTS 156
Query: 239 ---------STDVLYDPLFHLNLPPQPQPPLFRELFQSIPHGYSFPASASRAAANSLFGE 289
+ V+YDPLFHLN P QP+ + R + L E
Sbjct: 157 FSDIMSSSSAAAVMYDPLFHLNFPMQPRD-----------------QNQLRNGSCLLGVE 199
Query: 290 IGDERDATGAF-----YEDGDVGVHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQR 344
+ DA G + +N +LEF+ + GR + ++ TER+R
Sbjct: 200 DQIQMDANGGMNVLYFEGANNNNGGFENEILEFNNGVTRKGR----GSRKSRTSPTERER 255
Query: 345 REQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKRCVRER-RK 403
R N +F LK+L+PNPTK DRAS+VG+AI+YIKELLRT+ E K+LVEKKRC R R +K
Sbjct: 256 RVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGRFRSKK 315
Query: 404 RHRTEDDDE-----------GMKPLVDPADQSY-----NSSLRSSWLQRKSKDTEVDVRI 447
R R + KP + DQS N+SLR SWL+RKSK TEVDVRI
Sbjct: 316 RARVGEGGGGEDQEEEEDTVNYKPQSE-VDQSCFNKNNNNSLRCSWLKRKSKVTEVDVRI 374
Query: 448 IDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVYA 507
IDDEVTIKLVQ+KKI+CLLF ++VLD+LQLDLHHVAGG IG++YSFLFNTKI EGS VYA
Sbjct: 375 IDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKICEGSCVYA 434
Query: 508 GSIANKLIEVMDKQYAAVPPTS 529
IA+ L+EV++KQY P++
Sbjct: 435 SGIADTLMEVVEKQYMEAVPSN 456
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 334 PTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVE 393
P K+ ER+RR++LN + L+ +VP +K DRAS++GDAI+Y+KELL+ +N+L +E
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 394 KKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLR------SSWLQRKSKDTEVDVRI 447
T + PL P Q+ + ++ SS K + V+VR+
Sbjct: 325 S------------TPPSSSSLHPLT-PTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRL 371
Query: 448 IDDE-VTIKLVQRKKIDCLLFVSRVLDELQLDLHHVA 483
+ + V I + ++ LL R LD L LD+
Sbjct: 372 REGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAV 408
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
+P H ERQRRE+LN +F AL+ +VPN +K D+AS++GDAI YI EL
Sbjct: 449 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL----------- 497
Query: 393 EKKRCVRERRKRHRTEDDDEGMK-PLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDE 451
K + V+ ++ + ++ E +K L + + SS K E++V+II +
Sbjct: 498 -KSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWD 556
Query: 452 VTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGD 489
I++ K+ + L +L+L+++H + + D
Sbjct: 557 AMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVND 594
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 30/162 (18%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
+P H ERQRRE+LN +F +L+ +VPN +K D+AS++GDAI YI EL
Sbjct: 412 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINEL----------- 460
Query: 393 EKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNS--SLRSSWLQRKSK---------DT 441
+ K + E D E ++ +D + N+ S +RKS +
Sbjct: 461 --------KSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEM 512
Query: 442 EVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVA 483
E+DV+II +V I++ KK L EL L+++H +
Sbjct: 513 EIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHAS 554
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 28/159 (17%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
+P H ERQRRE+LN +F +L+ +VPN +K D+AS++GDAI YI EL
Sbjct: 413 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISEL----------- 461
Query: 393 EKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSK--------DTEVD 444
+ K + E D E ++ +D ++ ++ +SS RK + EVD
Sbjct: 462 --------KSKLQKAESDKEELQKQIDVMNKEAGNA-KSSVKDRKCLNQESSVLIEMEVD 512
Query: 445 VRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVA 483
V+II + I++ K+ L EL L+++H +
Sbjct: 513 VKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHAS 551
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 18/111 (16%)
Query: 274 FPASASRAAANSLFGEIGDE-RDATGAFYEDGDVGVHLDNRVLEFSRDLGCIGRRRETAG 332
F A++SRA+ N+ GE G E DA GA E G+ NR R G RR G
Sbjct: 383 FSAASSRASENNSDGEGGGEWADAVGA-DESGN------NR----PRKRG----RRPANG 427
Query: 333 KP--TKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
+ H ERQRRE+LN +F AL+ +VPN +K D+AS++GDA+ YI EL
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 334 PTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVE 393
P K+ ER+RR++LN + L+ +VP +K DRAS++GDAI+Y+KELL+ +N+L +E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 394 KKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLR-----SSWLQRKSKDTEVDVRII 448
PL P Q+ + ++ SS K + V+VR+
Sbjct: 365 ST-------PPGSLPPTSSSFHPLT-PTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLR 416
Query: 449 DDE-VTIKLVQRKKIDCLLFVSRVLDELQLDLHHV 482
+ V I + ++ LL + LD L LD+
Sbjct: 417 EGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQA 451
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTV 385
+P H ERQRRE+LN +F AL+ +VPN +K D+AS++GDAI YIKEL V
Sbjct: 392 EPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKV 444
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 14/143 (9%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKR 396
H ER+RRE+L +F AL LVP K D+ASV+GDA+++IK L V EL+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELE------- 205
Query: 397 CVRERRKRHRTEDD--DEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTI 454
E++K R E + K ++D +QS++SS + E++VR D++V I
Sbjct: 206 ---EQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDL--PEIEVRFSDEDVLI 260
Query: 455 KLVQRKKIDCLLFVSRVLDELQL 477
K++ K+ L + +++L +
Sbjct: 261 KILCEKQKGHLAKIMAEIEKLHI 283
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 327 RRETAGKPTKHFATERQRREQLNGKFKALKDLVPN--PTKNDRASVVGDAIEYIKELLRT 384
+ E + H A ER RR+Q+N L+ L+P+ + D+AS+VG AI Y+KEL
Sbjct: 107 KEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHI 166
Query: 385 VNELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDPADQ-----SYNSSLRSSWLQRKSK 439
+ ++ +R + H + D LV P Y++ S + S
Sbjct: 167 LQSME---------PKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSS 217
Query: 440 DTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKI 499
E++V + + IK++ +KK LL + L L+L L H+ + + + + ++
Sbjct: 218 PAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRV 277
Query: 500 YEGSSV 505
EGS +
Sbjct: 278 EEGSQL 283
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNP--TKNDRASVVGDAIEYIKELLRTVN 386
E + H A ER RR+Q+N + L+ L+P + D+AS++G AIE+++EL + +
Sbjct: 191 EVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQ 250
Query: 387 ELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDPADQSY-------------NSSLRSSW 433
L+ +K+R + R T P+ A+Q+ LR
Sbjct: 251 CLE--SQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREET 308
Query: 434 LQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSF 493
+ KS +V+V+++ + IK++ R++ L+ L++L L + H + +
Sbjct: 309 AENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLY 368
Query: 494 LFNTKIYEGSSVYAGSIANKLIEV 517
FN KI + A IA+ + ++
Sbjct: 369 SFNVKITSETRFTAEDIASSIQQI 392
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 335 TKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEK 394
K+ ER+RR++LN + AL+ LVP TK DRAS++GDAI Y+KEL EL+ +E+
Sbjct: 313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 395 KRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSS---------LRSSWLQRKSKDTEVDV 445
+ R + G S NS+ L +S + + + +VDV
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 446 RIIDD-EVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSS 504
+D E +K++ K + LD L L++ + S +F + +
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNEM 492
Query: 505 VYAGSIANKLIEV 517
V A + N L+E+
Sbjct: 493 VQAEHVRNSLLEI 505
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNP--TKNDRASVVGDAIEYIKELLRTVN 386
E + H A ER RR Q+N +L+ ++P+ + D+AS+VG AI+++K L + +
Sbjct: 187 EIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQ 246
Query: 387 ELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVR 446
L E +KR + DD++ P + ++ LR+S + +S +++
Sbjct: 247 SL-----------EAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEAT 295
Query: 447 IIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHV-AGGHIGDYYSFLFNTKI 499
+I+ V +K+ +K LL +L++L+ + H+ S+ FN K+
Sbjct: 296 VIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKM 349
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 322 GCIGRRRETAGKPTK-HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKE 380
G G +E +G TK H +ER+RRE+LN F LK L+P+ + ++AS++ + I Y+KE
Sbjct: 401 GATGAAQEMSGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKE 460
Query: 381 LLRTVNELK 389
L R V EL+
Sbjct: 461 LQRRVQELE 469
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 314 VLEFSRDLGCIGR------RRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDR 367
++E S+ IG ++ G+P+K+ ER+RR++LN + L+ +VP TK DR
Sbjct: 123 LMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDR 182
Query: 368 ASVVGDAIEYIKELLRTVNELK 389
S++GDAI+Y+KELL +N+L+
Sbjct: 183 TSILGDAIDYMKELLDKINKLQ 204
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 326 RRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTV 385
+ ++ G+P+K+ ER+RR++LN + L+ +VP +K DR S++GDAI+Y+KELL +
Sbjct: 168 KSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKI 227
Query: 386 NELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDV 445
N KL E++ H K D D + N L R S E+D
Sbjct: 228 N--KLQDEEQELGNSNNSHHS--------KLFGDLKDLNANEPLV-----RNSPKFEIDR 272
Query: 446 RIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDY 490
R D++ + + K LL L+ L L++ D+
Sbjct: 273 R--DEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDF 315
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 32/142 (22%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKR 396
H ER+RRE+LN KF L+ +VP TK D+ S++GD I Y+ L + V+EL+ +
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHE-- 421
Query: 397 CVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIKL 456
++ KR RT +RK+ + EV+V II+++V +++
Sbjct: 422 ---QQHKRTRT--------------------------CKRKTSE-EVEVSIIENDVLLEM 451
Query: 457 VQRKKIDCLLFVSRVLDELQLD 478
+ LL + +VL EL ++
Sbjct: 452 RCEYRDGLLLDILQVLHELGIE 473
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 18/175 (10%)
Query: 333 KPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLV 392
KP H ER RRE+LN +F AL+ +VPN +K D+ S++ DA+ YI EL ++L
Sbjct: 340 KPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVEL-- 397
Query: 393 EKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIID-DE 451
++H E +K + A Q + ++ S+ +++V+I++ D+
Sbjct: 398 ----------EKHAIEIQFNELKEI---AGQRNAIPSVCKYEEKASEMMKIEVKIMESDD 444
Query: 452 VTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSSVY 506
+++ RK + L +L+L+++H + + D N K+ G +Y
Sbjct: 445 AMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKM--GLRIY 497
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 328 RETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNE 387
R+T ++ +ER+RR ++ K AL+ LVPN TK D+AS+VGDA+ Y++EL +
Sbjct: 123 RKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKK 182
Query: 388 LK 389
LK
Sbjct: 183 LK 184
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 337 HFATERQRREQLNGKFKALKDLVPN--PTKNDRASVVGDAIEYIKELLRTVNELKLLVEK 394
H A ER RR Q+N K+L+ L P + D+AS++G IE+IKEL + V ++L K
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLV---QVLESK 59
Query: 395 KRCVRERRKR------HRT-EDDDEGMKPLVDPADQSYNSSLRSSWLQR----KSKDTEV 443
KR R+ R H+T E G P + N S++ + S V
Sbjct: 60 KR--RKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANV 117
Query: 444 DVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKI 499
+ +I V +++V R+ + L+ + VL++L + H+ + + + F KI
Sbjct: 118 EAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 36/167 (21%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVE--- 393
H +E++RRE+LN +F L+ ++P+ +K D+ S++ D IEY+++L + V EL+ E
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESAD 465
Query: 394 -KKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEV--------- 443
+ R +RK+ P D+ +S +RK D V
Sbjct: 466 TETRITMMKRKK---------------PDDEEERASANCMNSKRKGSDVNVGEDEPADIG 510
Query: 444 ------DVRI--IDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHV 482
++RI + +EV I+L + LL + V+ +L LD H V
Sbjct: 511 YAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSV 557
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKR 396
H ERQRRE+LN +F AL+ +VPN +K D+AS++ DAI YI ++ + + + E ++
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIR----VYETEK 376
Query: 397 CVRERRK 403
+ +RR+
Sbjct: 377 QIMKRRE 383
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKKR 396
H E+QRRE+LN +F AL+ +VP ++ D+AS++ DA+ YI+ L +++L+ ++K +
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMK 309
Query: 397 CVRERRKRHRTEDDD-EGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRIIDDEVTIK 455
TE D + P+ Y + + S R S D EV V+I+ +E I+
Sbjct: 310 M---------TETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGS-DLEVQVKIVGEEAIIR 359
Query: 456 L 456
+
Sbjct: 360 V 360
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 40/194 (20%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVE--- 393
H E++RRE+LN +F L+ ++P+ K D+ S++ D IEY++EL R V EL+ E
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTD 501
Query: 394 -----------KKRCVRERRKRHRTEDDDEGMKPLV--------DPADQSYNS---SLRS 431
KK C R +++ G V +PAD + +LR
Sbjct: 502 TETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTDNLR- 560
Query: 432 SWLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYY 491
+ +EV I+L + LL + V+ +L LD H V
Sbjct: 561 -------------IGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLL 607
Query: 492 SFLFNTKIYEGSSV 505
N K ++GS +
Sbjct: 608 CLTVNCK-HKGSKI 620
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLL 391
H +E++RR ++N K KAL+ L+PN K D+AS++ +AIEY+K+L V L ++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVM 152
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 37/198 (18%)
Query: 327 RRETAGKPTKHFATERQRREQLNGKFKALKDLVP--NPTKNDRASVVGDAIEYIKELLRT 384
+ E + H A ER RR+Q+N L+ L+P + D+AS+VG AI Y+KEL
Sbjct: 117 KEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHH 176
Query: 385 VNELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSS--------WLQR 436
+ ++ V + TED G DQ+ +S SS + Q
Sbjct: 177 LQSMEPPV-----------KTATEDTGAGH-------DQTKTTSASSSGPFSDFFAFPQY 218
Query: 437 KSKDT---------EVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHI 487
++ T E++V +++ ++K++ +K+ LL + + L+L L H+
Sbjct: 219 SNRPTSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 278
Query: 488 GDYYSFLFNTKIYEGSSV 505
D + + K+ EGS +
Sbjct: 279 DDSVLYSISVKVEEGSQL 296
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 330 TAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELL 382
T+ +K+ +ER RR++LN + AL+ +VPN +K D+ASV+ D+I+Y++EL+
Sbjct: 48 TSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELI 100
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
H +E++RR ++N K KAL+ L+PN K D+AS++ +AIEY+K+L V L +
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 335 TKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
+K+ +ER RR++LN + AL+ +VPN TK D+AS++ DAI YI+ L
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGL 100
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 308 VHLDNRVLEFSRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDR 367
+++N+ E +RD R R H +ER+RR+++N KAL++L+P TK DR
Sbjct: 257 TNVENQGTEEARDSTSSKRSRAA----IMHKLSERRRRQKINEMMKALQELLPRCTKTDR 312
Query: 368 ASVVGDAIEYIKEL 381
+S++ D IEY+K L
Sbjct: 313 SSMLDDVIEYVKSL 326
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 322 GCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
G G +E + H +ER+RRE+LN F LK L+P+ + ++AS++ + I Y+KEL
Sbjct: 405 GATGAAQEMSAT-KNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKEL 463
Query: 382 LRTVNELK 389
R V EL+
Sbjct: 464 QRRVQELE 471
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTV 385
H ER+RRE+L +F AL L+P K D+ASV+GDAI++IK L +V
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLL 391
H +ER+RR+++N + K L+ LVPN +K D+AS++ + IEY+K+L V+ + +
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRM 272
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 79/142 (55%), Gaps = 19/142 (13%)
Query: 336 KHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKLLVEKK 395
+H +ER+RRE+LN F+AL+ L+P TK D+ASV+ A E + L E+ L+E+
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSL---QGEISKLLERN 345
Query: 396 RCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDVRII------- 448
R V + R ++D ++P ++ +N +R + S++ +D+R++
Sbjct: 346 REVEAKLAGEREIEND--LRP-----EERFNVRIR-HIPESTSRERTLDLRVVLRGDIIR 397
Query: 449 DDEVTIKLVQ-RKKIDCLLFVS 469
D++ I+L++ K+I+ + VS
Sbjct: 398 VDDLMIRLLEFLKQINNVSLVS 419
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNPT---KNDRASVVGDAIEYIKELLRTV 385
E + H A ER RR Q+N +L+ L+P P+ + D+AS+VG AI++IKEL + +
Sbjct: 109 EVENQRMTHIAVERNRRRQMNEHLNSLRSLMP-PSFLQRGDQASIVGGAIDFIKELEQLL 167
Query: 386 NELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKD-TEVD 444
L+ EK++ + + + + +S + D TEV+
Sbjct: 168 QSLE--AEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVE 225
Query: 445 VRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYSFLFNTKIYEGSS 504
+I + V++K+ ++ +L ++EL+L + H+ D+ + FN K+ +G
Sbjct: 226 ATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCK 285
Query: 505 V-YAGSIANKLIEVMDK 520
+ A IA + ++ ++
Sbjct: 286 LGSADEIATAVHQIFEQ 302
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 328 RETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNE 387
+E A K KH ER+RR ++N +F L+ ++PN K D+ASV+G+ + Y EL + V +
Sbjct: 89 KEVAAK--KHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQD 146
Query: 388 L 388
+
Sbjct: 147 I 147
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNP--TKNDRASVVGDAIEYIKEL 381
E + H A ER RR Q+N L+ L+P P K D+AS+VG AI++IKEL
Sbjct: 82 EAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKEL 136
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
H +ER+RR+++N K +AL++L+PN K D+AS++ +AIEY+K L V + +
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSM 401
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 322 GCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
G R+R A + H ER+RRE++N + K L+ L+P K+ + S++ D IEY+K L
Sbjct: 142 GSTSRKRSRAAE--MHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSL 199
Query: 382 LRTVNEL 388
+N+
Sbjct: 200 EMQINQF 206
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 39/54 (72%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
H +ER+RR+++N + KAL++L+P K+D+AS++ +AIEY+K L + + +
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 342
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 329 ETAGKPTKHFATERQRREQLNGKFKALKDLVPNPT---KNDRASVVGDAIEYIKELLRTV 385
E + H A ER RR Q+N +L+ L+P P+ + D+AS+VG AI Y+K L + +
Sbjct: 172 EIENQRINHIAVERNRRRQMNEHINSLRALLP-PSYIQRGDQASIVGGAINYVKVLEQII 230
Query: 386 NELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDPADQSYNSSLRSSWLQRKSKDTEVDV 445
L E +KR + + + E ++ ++ ++ L ++ L+ ++ +++
Sbjct: 231 QSL-----------ESQKRTQQQSNSEVVENALNHLSGISSNDLWTT-LEDQTCIPKIEA 278
Query: 446 RIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHV 482
+I + V++K+ KK LL L++L+L + H+
Sbjct: 279 TVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHL 315
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 337 HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVNELKL 390
H ER+RR++ N K +AL+DL+PN K+D+AS++ +AI+Y++ L V + +
Sbjct: 234 HKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 28/203 (13%)
Query: 325 GRRRETAGKPTK-------HFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEY 377
G +R+T T+ H ER+RRE+L+ KF AL L+P K D+ +++ DAI
Sbjct: 101 GTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISR 160
Query: 378 IKELLRTVNELKLLVEKKRCVRERR-----KRHRTEDDDEGMKPLVDPADQSYNSSLRSS 432
+K+L +L+ L E+K R+ K+ + D+E ++ +L
Sbjct: 161 MKQL---QEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQAL--- 214
Query: 433 WLQRKSKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVSRVLDELQLDLHHVAGGHIGDYYS 492
E++ +I +++ I+++ K C++ + ++ QL + + GD S
Sbjct: 215 --------PEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGD--S 264
Query: 493 FLFNTKIYEGSSVYAGSIANKLI 515
L T + + ++ SI L+
Sbjct: 265 TLDITVLAQMDKDFSMSILKDLV 287
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 327 RRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVN 386
RR A P H ER RRE++ + KAL++LVPN K D+AS++ + I+Y+K L V
Sbjct: 141 RRGQATDP--HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
Query: 387 ELKL 390
L +
Sbjct: 199 VLSM 202
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 308 VHLDNRVLEFSRDLGCIGRRRETAGKP---TKHFATERQRREQLNGKFKALKDLVPNPTK 364
V +D +V +D G RRE P +H ER+RR++LN + AL L+P K
Sbjct: 105 VSMDQKVGSKRKDCVNNGGRRE----PHLLKEHVLAERKRRQKLNERLIALSALLPGLKK 160
Query: 365 NDRASVVGDAIEYIKELLRTVNELKLLVEKKRCVRER 401
D+A+V+ DAI+++K+L V +L E++R V ++
Sbjct: 161 TDKATVLEDAIKHLKQLQERVKKL----EEERVVTKK 193
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 322 GCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKEL 381
G R+R + H ER+RRE++N K K L+ L+P K+ + S + DAIEY+K L
Sbjct: 247 GSTSRKRSRTAE--MHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSL 304
>sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis thaliana GN=BIM3 PE=1 SV=1
Length = 298
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 318 SRDLGCIGRRRETAGKPTKHFATERQRREQLNGKFKALKDLVP---NPTKNDRASVVGDA 374
SR+ GRR + + +KH TE++RR ++N +F++L D++P N K D+AS + +
Sbjct: 20 SRNDSSTGRRNRNSCR-SKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEV 78
Query: 375 IEYIKELLRTV 385
IEYI L V
Sbjct: 79 IEYIHFLQEKV 89
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 327 RRETAGKPTKHFATERQRREQLNGKFKALKDLVPNPTKNDRASVVGDAIEYIKELLRTVN 386
RR A P H ER RRE++ + K+L++LVPN K D+AS++ + IEY++ L V
Sbjct: 102 RRGQATDP--HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVK 159
Query: 387 ELKLLVEKKRCVRERRKRHRTEDDDEGMKPLVDP---------ADQSYNSSLRSSWLQRK 437
L + R + + + L P A S N SLRS+ QR
Sbjct: 160 VLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRSTE-QRV 218
Query: 438 SKDTEVDVRIIDDEVTIKLVQRKKIDCLLFVS 469
+K E D+ ++ +Q K + CL+ +S
Sbjct: 219 AKLMEEDM-----GSAMQYLQGKGL-CLMPIS 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,096,012
Number of Sequences: 539616
Number of extensions: 9437349
Number of successful extensions: 28665
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 28376
Number of HSP's gapped (non-prelim): 377
length of query: 532
length of database: 191,569,459
effective HSP length: 122
effective length of query: 410
effective length of database: 125,736,307
effective search space: 51551885870
effective search space used: 51551885870
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)