BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009558
(532 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
Query: 262 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNV--LGNGDIACDEYHKY 318
T+ FP GF+FG+ ++AYQ EGA EDGR +IWDTFAH G + N D+A D+YH++
Sbjct: 13 TRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVAVDQYHRF 72
Query: 319 KEDVKLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 378
+ED++LMA G+DAYRFSI+WSR+ PNG G VN G+ +YN LI+ L++ GIQP+VTL+H
Sbjct: 73 EEDIQLMADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH 132
Query: 379 SDLPQALEDEYGGWINRMIV 398
DLPQALED+Y GW++R IV
Sbjct: 133 WDLPQALEDKYKGWLDRQIV 152
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 400 ANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKH 459
A+P +GDYP M+ G RLP FT E+ +KG+ DF+G+ +Y T Y + N +++
Sbjct: 278 ADPFFFGDYPATMRARVGERLPRFTADEAAVVKGALDFVGINHYTTYYTRHNNTNIIGTL 337
Query: 460 RDWS-ADTATKFF-FKQDTAASSNE--------PSSLQIVLEYFKQVYGNPPIYIHENG 508
+ + ADT T FK P ++ ++ Y K+ Y +PP+YI ENG
Sbjct: 338 LNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENG 396
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV GN GD+A D+YH+YKEDV
Sbjct: 20 FPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV 79
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H DLP
Sbjct: 80 NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLP 139
Query: 383 QALEDEYGGWIN 394
ALE +YGGW+N
Sbjct: 140 LALEKKYGGWLN 151
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ G YP+IM+ RLP FT +++ +KGSAD+IG+ Y Y+K ++Q
Sbjct: 278 DPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQ-QLMQQTPT 336
Query: 461 DWSADTATKFFFKQDT-----AASSNE----PSSLQIVLEYFKQVYGNPPIYIHENG 508
+SAD + F ++ A+SN P + + Y KQ YGNP + I NG
Sbjct: 337 SYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITANG 393
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV GN GD+A D+YH+YKEDV
Sbjct: 20 FPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV 79
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H DLP
Sbjct: 80 NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLP 139
Query: 383 QALEDEYGGWIN 394
ALE +YGGW+N
Sbjct: 140 LALEKKYGGWLN 151
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ G YP+IM+ RLP FT +++ +KGSAD+IG+ Y Y+K ++Q
Sbjct: 278 DPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQ-QLMQQTPT 336
Query: 461 DWSADTATKFFFKQDT-----AASSNE----PSSLQIVLEYFKQVYGNPPIYIHENG 508
+SAD F ++ A+SN P + + Y KQ YGNP + I NG
Sbjct: 337 SYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNG 393
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV GN GD+A D+YH+YKEDV
Sbjct: 20 FPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV 79
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H DLP
Sbjct: 80 NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLP 139
Query: 383 QALEDEYGGWIN 394
ALE +YGGW+N
Sbjct: 140 LALEKKYGGWLN 151
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ G YP+IM+ RLP FT +++ +KGSAD+IG+ Y Y+K ++Q
Sbjct: 278 DPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQ-QLMQQTPT 336
Query: 461 DWSADTATKFFFKQDT-----AASSNE----PSSLQIVLEYFKQVYGNPPIYIHENG 508
+SAD + F ++ A+SN P + + Y KQ YGNP + I NG
Sbjct: 337 SYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITSNG 393
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV GN GD+A D+YH+YKEDV
Sbjct: 20 FPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV 79
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H DLP
Sbjct: 80 NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLP 139
Query: 383 QALEDEYGGWIN 394
ALE +YGGW+N
Sbjct: 140 LALEKKYGGWLN 151
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ G YP+IM+ RLP FT +++ +KGSAD+IG+ Y Y+K ++Q
Sbjct: 278 DPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQ-QLMQQTPT 336
Query: 461 DWSADTATKFFFKQDT-----AASSNE----PSSLQIVLEYFKQVYGNPPIYIHENG 508
+SAD + F ++ A+SN P + + Y KQ YGNP + I ENG
Sbjct: 337 SYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENG 393
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV GN GD+A D+YH+YKEDV
Sbjct: 20 FPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV 79
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H DLP
Sbjct: 80 NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLP 139
Query: 383 QALEDEYGGWIN 394
ALE +YGGW+N
Sbjct: 140 LALEKKYGGWLN 151
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ G YP+IM+ RLP FT +++ +KGSAD+IG+ Y Y+K ++Q
Sbjct: 278 DPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQ-QLMQQTPT 336
Query: 461 DWSADTATKFFFKQDT-----AASSNE----PSSLQIVLEYFKQVYGNPPIYIHENG 508
+SAD + F ++ A+SN P + + Y KQ YGNP + I ENG
Sbjct: 337 SYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENG 393
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV GN GD+A D+YH+YKEDV
Sbjct: 20 FPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV 79
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H DLP
Sbjct: 80 NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLP 139
Query: 383 QALEDEYGGWIN 394
ALE +YGGW+N
Sbjct: 140 LALEKKYGGWLN 151
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ G YP+IM+ RLP FT +++ +KGSAD+IG+ Y Y+K ++Q
Sbjct: 278 DPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQ-QLMQQTPT 336
Query: 461 DWSADTATKFFFKQDT-----AASSNE----PSSLQIVLEYFKQVYGNPPIYIHENG 508
+SAD + F ++ A+SN P + + Y KQ YGNP + I NG
Sbjct: 337 SYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNG 393
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV GN GD+A D+YH+YKEDV
Sbjct: 20 FPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV 79
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H DLP
Sbjct: 80 NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLP 139
Query: 383 QALEDEYGGWIN 394
ALE +YGGW+N
Sbjct: 140 LALEKKYGGWLN 151
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ G YP+IM+ RLP FT +++ +KGSAD+IG+ Y Y+K ++Q
Sbjct: 278 DPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQ-QLMQQTPT 336
Query: 461 DWSADTATKFFFKQDT-----AASSNE----PSSLQIVLEYFKQVYGNPPIYIHENG 508
++AD + F ++ A+SN P + + Y KQ YGNP + I NG
Sbjct: 337 SYAADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNG 393
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 107/147 (72%), Gaps = 6/147 (4%)
Query: 258 AVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDIACD 313
A +++DFP FI G+G+SAYQ+EG A + GR PSIWDTF H + NGD+A D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 314 EYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 371
YH YKEDV ++ GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 372 PHVTLHHSDLPQALEDEYGGWINRMIV 398
P VTL H D+PQALEDEYGG+++ IV
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIV 160
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+ GDYPK MK+ GSRLP F+ +S+ +KGS DF+G +NYYT N S+ +
Sbjct: 306 PITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVG-LNYYTASYVTNASTNSSGSNN 364
Query: 462 WSADTATKFFFKQDTAASSNEPSS-----------LQIVLEYFKQVYGNPPIYIHENG 508
+S +T ++ D P S ++ +L Y K+ Y P IY+ ENG
Sbjct: 365 FSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENG 422
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 113/161 (70%), Gaps = 10/161 (6%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAG----NVLGNGDIACDEYHKYKED 321
F PGF+FG+ +SA+Q EGAA EDG+ PSIWDTF H NGD+A DEYH+YKED
Sbjct: 19 FAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDEYHRYKED 78
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTLHHS 379
+ +M LDAYRFSISW R++P G+ G VN +G+ YYNNLINE+++ G+QP+VTL H
Sbjct: 79 IGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHW 138
Query: 380 DLPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
D+PQALEDEY G++ R IV + DY ++ + G R+
Sbjct: 139 DVPQALEDEYRGFLGRNIVDD----FRDYAELCFKEFGDRV 175
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL G YP+ M+ RLP F+ ES+++ GS DF+G +NYY+ Y +
Sbjct: 284 HPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSFDFLG-LNYYSSYYAAKAPRIPNARP 342
Query: 461 DWSADTATKFFFKQD------TAASSN---EPSSLQIVLEYFKQVYGNPPIYIHENG 508
D+ F+ + AASS P ++ +L Y K Y NP IYI ENG
Sbjct: 343 AIQTDSLINATFEHNGKPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENG 399
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 108/147 (73%), Gaps = 6/147 (4%)
Query: 258 AVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH--AGNVLG--NGDIACD 313
A +++DFP FI G+G+SAYQ+EG A + GR PSIWDTF H + G NGD+A D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 314 EYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 371
YH YKEDV ++ GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 372 PHVTLHHSDLPQALEDEYGGWINRMIV 398
P VTL H D+PQALEDEYGG+++ IV
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIV 160
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+ GDYPK MK+ GSRLP F+ +S+ +KGS DF+G +NYYT N S+ +
Sbjct: 306 PITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVG-LNYYTASYVTNASTNSSGSNN 364
Query: 462 WSADTATKFFFKQDTAASSNEPSS-----------LQIVLEYFKQVYGNPPIYIHENG 508
+S +T ++ D P S ++ +L Y K+ Y P IY+ ENG
Sbjct: 365 FSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENG 422
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 108/147 (73%), Gaps = 6/147 (4%)
Query: 258 AVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH--AGNVLG--NGDIACD 313
A +++DFP FI G+G+SAYQ+EG A + GR PSIWDTF H + G NGD+A D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 314 EYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 371
YH YKEDV ++ GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 372 PHVTLHHSDLPQALEDEYGGWINRMIV 398
P VTL H D+PQALEDEYGG+++ IV
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIV 160
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+ GDYPK MK+ GSRLP F+ +S+ +KGS DF+G +NYYT N S+ +
Sbjct: 306 PITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVG-LNYYTASYVTNASTNSSGSNN 364
Query: 462 WSADTATKFFFKQDTAASSNEPSS-----------LQIVLEYFKQVYGNPPIYIHENG 508
+S +T ++ D P S ++ +L Y K+ Y P IY+ ENG
Sbjct: 365 FSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENG 422
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 18/201 (8%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNV--LGNGDIACDEYHKYKEDV 322
FP FIFG+ T+AYQ+EGA ED + SIWD F+H GNV + NGDIACD YH+YKEDV
Sbjct: 6 FPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHIPGNVAKMHNGDIACDHYHRYKEDV 65
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+L+ G+ +YRFSI+W R+ P G G +N KG+Q+Y +LI+ELI I+P +T++H DLP
Sbjct: 66 QLLKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLP 125
Query: 383 QALEDEYGGWINRMIVVANPLV---YGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIG 439
Q L+D GGW ANP V Y DY ++ + G R+ + H + A ++G
Sbjct: 126 QKLQD-IGGW-------ANPQVADYYVDYANLLFREFGDRVKTWITHNEPWV---ASYLG 174
Query: 440 -VINYYTVYIKDNPSSLKQKH 459
+ + IKD +L H
Sbjct: 175 YALGVHAPGIKDMKMALLAAH 195
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 391 GWINRMIVVANPLVYGDYPKIMKQ--NAGSRLPAFTDHESQQIKGSADFIGVINYYTVYI 448
GW NR + A + G YP+ M + + + +P ++ ++DF+G INYYT +
Sbjct: 244 GWNNRWFLDA--ALKGTYPEDMIKIFSDTNIMPELPKELFTEVFETSDFLG-INYYTRQV 300
Query: 449 KDNPSSLKQKHRDWSADTATKFFFKQDTAASSN---------EPSSLQIVLEYFKQVYGN 499
N S F ++ A N P L +L + YGN
Sbjct: 301 VKNNSEA---------------FIGAESVAMDNPKTEMGWEIYPQGLYDLLTRIHRDYGN 345
Query: 500 PPIYIHENG 508
+YI ENG
Sbjct: 346 IDLYITENG 354
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 122/193 (63%), Gaps = 18/193 (9%)
Query: 242 QASVKRSYKPASSALTAVEY--------TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPS 293
A + YK A SA Y ++ FP GFIFG+ +S+YQ EG A E GR PS
Sbjct: 2 MADITSLYKKAGSAAAPFAYNSAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPS 61
Query: 294 IWDTFAHAG----NVLGNGDIACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNG--R 347
IWDTF H NGD+A D YH YKEDV+LM G+DAYRFSISW+R++PNG R
Sbjct: 62 IWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLR 121
Query: 348 GPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALEDEYGGWINRMIVVANPLVYGD 407
G VN +G++YYNNLINEL+S G+QP +TL H D PQALED+Y G+++ I+ + D
Sbjct: 122 GGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIIND----FKD 177
Query: 408 YPKIMKQNAGSRL 420
Y +I + G R+
Sbjct: 178 YAEICFKEFGDRV 190
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 401 NPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
+PL+ GDYP M+ G+RLP FT +S+ +KG+ DFIG +NYYT DN +
Sbjct: 299 DPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIG-LNYYTANYADNLPPSNGLNN 357
Query: 461 DWSADTATKFFFKQD------TAASS---NEPSSLQIVLEYFKQVYGNPPIYIHENG 508
++ D+ ++ AAS P + +L Y K+ YGNP +YI ENG
Sbjct: 358 SYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENG 414
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 104/153 (67%), Gaps = 5/153 (3%)
Query: 251 PASSALTAVEYTKND-FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAG----NVL 305
P + L + K D F F+FG+ TSAYQ+EGA NEDG+ PS WD F H +
Sbjct: 58 PVFTKLKPWQIPKRDWFSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDG 117
Query: 306 GNGDIACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINEL 365
NGD+A + YH Y+EDVK + G+ YRFSISWSR++PNG G N KG+ YYNNLIN L
Sbjct: 118 TNGDVAANSYHMYEEDVKALKDMGMKVYRFSISWSRILPNGTGKPNQKGIDYYNNLINSL 177
Query: 366 ISYGIQPHVTLHHSDLPQALEDEYGGWINRMIV 398
I +GI P+VT+ H D PQALED+YGG++++ IV
Sbjct: 178 IRHGIVPYVTIWHWDTPQALEDKYGGFLDKQIV 210
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 59/126 (46%), Gaps = 28/126 (22%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ G RLP FT E +++ S D +G +NYYT S KH D
Sbjct: 338 PVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMG-LNYYT--------SRFSKHVD 388
Query: 462 WSAD------TATKFFFKQDTAASSNE-------------PSSLQIVLEYFKQVYGNPPI 502
S+D T + + T + NE P L +L K+ YGNPPI
Sbjct: 389 ISSDYTPTLNTDDAYASSETTGSDGNEIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPI 448
Query: 503 YIHENG 508
+I ENG
Sbjct: 449 FITENG 454
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 122/207 (58%), Gaps = 15/207 (7%)
Query: 225 FLQNSLEENEVAAKKFDQASVKRSYKPAS------SALTAVEYTKND-FPPGFIFGSGTS 277
F + ++ ++ D+A KPA + L + K D F F+FG+ TS
Sbjct: 26 FERQHMDSPDLGTDDDDKAMAGTPSKPAEPIGPVFTKLKPWQIPKRDWFDKDFLFGASTS 85
Query: 278 AYQVEGAANEDGRTPSIWDTFAHAG----NVLGNGDIACDEYHKYKEDVKLMAKTGLDAY 333
AYQ+EGA NEDG+ PS WD F H + + NGD+A + YH Y+EDVK + G+ Y
Sbjct: 86 AYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEEDVKALKDMGMKVY 145
Query: 334 RFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALEDEYGGWI 393
RFSISWSR++P+G G VN G+ YYN LIN LI I P+VT+ H D PQALED+YGG++
Sbjct: 146 RFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFL 205
Query: 394 NRMIVVANPLVYGDYPKIMKQNAGSRL 420
NR IV Y + ++ +N G R+
Sbjct: 206 NRQIVDD----YKQFAEVCFKNFGDRV 228
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 28/126 (22%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ G RLP FT E +++ S D +G +NYYT S KH D
Sbjct: 338 PVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMG-LNYYT--------SRFSKHVD 388
Query: 462 WSAD------TATKFFFKQDTAASSNE-------------PSSLQIVLEYFKQVYGNPPI 502
S D T + + T + N+ P L +L K+ YGNPP+
Sbjct: 389 MSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPV 448
Query: 503 YIHENG 508
+I ENG
Sbjct: 449 FITENG 454
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 122/207 (58%), Gaps = 15/207 (7%)
Query: 225 FLQNSLEENEVAAKKFDQASVKRSYKPAS------SALTAVEYTKND-FPPGFIFGSGTS 277
F + ++ ++ D+A KPA + L + K D F F+FG+ TS
Sbjct: 26 FERQHMDSPDLGTDDDDKAMAGTPSKPAEPIGPVFTKLKPWQIPKRDWFDKDFLFGASTS 85
Query: 278 AYQVEGAANEDGRTPSIWDTFAHAG----NVLGNGDIACDEYHKYKEDVKLMAKTGLDAY 333
AYQ+EGA NEDG+ PS WD F H + + NGD+A + YH Y+EDVK + G+ Y
Sbjct: 86 AYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEEDVKALKDMGMKVY 145
Query: 334 RFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALEDEYGGWI 393
RFSISWSR++P+G G VN G+ YYN LIN LI I P+VT+ H D PQALED+YGG++
Sbjct: 146 RFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFL 205
Query: 394 NRMIVVANPLVYGDYPKIMKQNAGSRL 420
NR IV Y + ++ +N G R+
Sbjct: 206 NRQIVDD----YKQFAEVCFKNFGDRV 228
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 28/126 (22%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ G RLP FT E +++ S D +G +NYYT S KH D
Sbjct: 338 PVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMG-LNYYT--------SRFSKHVD 388
Query: 462 WSAD------TATKFFFKQDTAASSNE-------------PSSLQIVLEYFKQVYGNPPI 502
S D T + + T + N+ P L +L K+ YGNPP+
Sbjct: 389 MSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPV 448
Query: 503 YIHENG 508
+I ENG
Sbjct: 449 FITENG 454
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 120/179 (67%), Gaps = 9/179 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGD---IACDEYHKYKEDV 322
FP F +G T+AYQ+EGA NEDGR SIWDTFAH + NGD +ACD YH+ +EDV
Sbjct: 5 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVKNGDNGNVACDSYHRVEEDV 64
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+L+ G+ YRFSISW R++P G G VN GL YY+ L++EL++ GI+P TL+H DLP
Sbjct: 65 QLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLP 124
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAF-TDHESQQIKGSADFIGV 440
QAL+D+ GGW +R+ + A + +Y ++M + G ++ + T +E + ++++GV
Sbjct: 125 QALQDQ-GGWGSRITIDA----FAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGV 178
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 401 NPLVYGDYPKIM---KQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYI-KDNPSSLK 456
+P+ +G+YPK M +N G + P D + + I DFIG INYYT + + NP
Sbjct: 251 DPIYFGEYPKFMLDWYENLGYK-PPIVDGDMELIHQPIDFIG-INYYTSSMNRYNPGEAG 308
Query: 457 QKHRDWSADTATKFFFKQDTAASSNEPSSLQIVLEYFKQVYGNPPIYIHENG 508
S++ + K D L +L Y YGNP +YI ENG
Sbjct: 309 GML---SSEAISMGAPKTDIGWEI-YAEGLYDLLRYTADKYGNPTLYITENG 356
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 102/142 (71%), Gaps = 6/142 (4%)
Query: 263 KNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDIACDEYHKY 318
+ DFP FIFG+G SAYQ EGA NE R PSIWDTF NG+ A + YH Y
Sbjct: 40 RRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMY 99
Query: 319 KEDVKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTL 376
KED+K+M +TGL++YRFSISWSR++P GR VN G+++Y++ I+EL++ GI+P VTL
Sbjct: 100 KEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTL 159
Query: 377 HHSDLPQALEDEYGGWINRMIV 398
H DLPQALEDEYGG+++ IV
Sbjct: 160 FHWDLPQALEDEYGGFLSHRIV 181
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYT-VYIKDNPSSLKQKHR 460
PL GDYPK M++ RLP F+ +S+++KG DFIG +NYYT Y+ + S +K
Sbjct: 304 PLTTGDYPKSMRELVKGRLPKFSADDSEKLKGCYDFIG-MNYYTATYVTNAVKSNSEKLS 362
Query: 461 DWSADTATKFFFKQDTAASSN--------EPSSLQIVLEYFKQVYGNPPIYIHENG 508
+ D TK F + P L +L Y K+ Y P +Y+ E+G
Sbjct: 363 YETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESG 418
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 4/133 (3%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGD---IACDEYHKYKEDV 322
FP GF++GS T++YQ+EGAA EDGRTPSIWDT+A + NGD +A D YH+++EDV
Sbjct: 18 FPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWREDV 77
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LMA+ GL AYRFS++W R+ P GRGP KGL +Y L +EL++ GIQP TL+H DLP
Sbjct: 78 ALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLP 137
Query: 383 QALEDEYGGWINR 395
Q LE+ GGW R
Sbjct: 138 QELENA-GGWPER 149
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLG--NGDIACDEYHKYKEDV 322
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH G V NG++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L GI+P TL+H DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 383 QALEDEYGGWINRMIVVA 400
QAL+D GGW NR + A
Sbjct: 125 QALQDA-GGWGNRRTIQA 141
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLG--NGDIACDEYHKYKEDV 322
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH G V NG++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L GI+P TL+H DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 383 QALEDEYGGWINRMIVVA 400
QAL+D GGW NR + A
Sbjct: 125 QALQDA-GGWGNRRTIQA 141
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 110/169 (65%), Gaps = 11/169 (6%)
Query: 256 LTAVEYTKND-FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDI 310
L+ E + D FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H NGD+
Sbjct: 65 LSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDV 124
Query: 311 ACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISY 368
A D YH Y EDV+L+ + G+DAYRFSISW R++P G G +N KG++YYN LI+ L+
Sbjct: 125 AADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLEN 184
Query: 369 GIQPHVTLHHSDLPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAG 417
GI+P++T+ H D PQAL + YGG+++ I+ Y D+ K+ + G
Sbjct: 185 GIEPYITIFHWDTPQALVEAYGGFLDERIIKD----YTDFAKVCFEKFG 229
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 58/128 (45%), Gaps = 32/128 (25%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ +A R+P F + E +++ GS D IG INYYT S KH D
Sbjct: 341 PVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIG-INYYT--------STFSKHID 391
Query: 462 WSADTATKFFFKQDTAASSNE---------------------PSSLQIVLEYFKQVYGNP 500
S + + D A +S E P L +L K YGNP
Sbjct: 392 LSPNNSP--VLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNP 449
Query: 501 PIYIHENG 508
P+YI ENG
Sbjct: 450 PMYITENG 457
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLG--NGDIACDEYHKYKEDV 322
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH G V NG++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 383 QALEDEYGGWINRMIVVA 400
QAL+D GGW NR + A
Sbjct: 125 QALQDA-GGWGNRRTIQA 141
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLG--NGDIACDEYHKYKEDV 322
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH G V NG++ACD YH+Y+ED+
Sbjct: 6 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 65
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H DLP
Sbjct: 66 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 125
Query: 383 QALEDEYGGWINRMIVVA 400
QAL+D GGW NR + A
Sbjct: 126 QALQDA-GGWGNRRTIQA 142
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLG--NGDIACDEYHKYKEDV 322
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH G V NG++ACD YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 383 QALEDEYGGWINRMIVVA 400
QAL+D GGW NR + A
Sbjct: 125 QALQDA-GGWGNRRTIQA 141
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 8/164 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGD---IACDEYHKYKEDV 322
FP FI+G+ TS+YQ+EGA NEDG+ SIWD F+H + NGD IACD YH Y+ED+
Sbjct: 13 FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDIACDHYHLYREDI 72
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G+ +YRFS SW R++P G+G VN KGL +Y L++ L+ I+P +TL+H DLP
Sbjct: 73 ELMKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLP 132
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDH 426
QAL+D+ GGW NR + +Y ++M + + + H
Sbjct: 133 QALQDK-GGWTNR----DTAKYFAEYARLMFEEFNGLVDLWVTH 171
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 11/172 (6%)
Query: 256 LTAVEYTKND-FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDI 310
L+ E + D FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H NGD+
Sbjct: 65 LSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDV 124
Query: 311 ACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISY 368
A D YH Y EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+
Sbjct: 125 AADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLEN 184
Query: 369 GIQPHVTLHHSDLPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
GI+P++T+ H D PQAL D YGG+++ I+ Y D+ K+ + G ++
Sbjct: 185 GIEPYITIFHWDTPQALVDAYGGFLDERIIKD----YTDFAKVCFEKFGKKV 232
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 58/128 (45%), Gaps = 32/128 (25%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ +A R+P F + E +++ GS D IG INYYT S KH D
Sbjct: 341 PVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIG-INYYT--------STFSKHID 391
Query: 462 WSADTATKFFFKQDTAASSNE---------------------PSSLQIVLEYFKQVYGNP 500
S + + D A +S E P L +L K YGNP
Sbjct: 392 LSPNNSP--VLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNP 449
Query: 501 PIYIHENG 508
P+YI ENG
Sbjct: 450 PMYITENG 457
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 109/169 (64%), Gaps = 11/169 (6%)
Query: 256 LTAVEYTKND-FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDI 310
L+ E + D FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H NGD+
Sbjct: 65 LSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDV 124
Query: 311 ACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISY 368
A D YH Y EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+
Sbjct: 125 AADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLEN 184
Query: 369 GIQPHVTLHHSDLPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAG 417
GI+P++T+ H D PQAL D YGG+++ I+ Y D+ K+ + G
Sbjct: 185 GIEPYITIFHWDTPQALVDAYGGFLDERIIKD----YTDFAKVCFEKFG 229
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 58/128 (45%), Gaps = 32/128 (25%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ +A R+P F + E +++ GS D IG INYYT S KH D
Sbjct: 341 PVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIG-INYYT--------STFSKHID 391
Query: 462 WSADTATKFFFKQDTAASSNE---------------------PSSLQIVLEYFKQVYGNP 500
S + + D A +S E P L +L K YGNP
Sbjct: 392 LSPNNSP--VLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNP 449
Query: 501 PIYIHENG 508
P+YI ENG
Sbjct: 450 PMYITENG 457
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 270 FIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL---GNGDIACDEYHKYKEDVKLMA 326
F++G TSAYQ+EGA EDGR PSIWDTFA + G+ ACD YH+Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDTFARRPGAIRDGSTGEPACDHYHRYEEDIALMQ 67
Query: 327 KTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALE 386
G+ YRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H DLPQALE
Sbjct: 68 SLGVGVYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQALE 127
Query: 387 DEYGGWINR 395
D GGW +R
Sbjct: 128 DR-GGWRSR 135
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 107/157 (68%), Gaps = 8/157 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNG---DIACDEYHKYKEDV 322
P F++G T+AYQ+EG+ ++DGR PSIWDTF A + +G D+A D Y++++EDV
Sbjct: 9 LPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIADGSSGDVATDSYNRWREDV 68
Query: 323 KLMAKTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
+L+ G+ AYRFS+SWSR+IP G PVN G+++Y LI EL+ GI P VTL+H D
Sbjct: 69 QLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWD 128
Query: 381 LPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAG 417
LPQAL+D YGGW+N+ + + + +Y K+ ++ G
Sbjct: 129 LPQALDDRYGGWLNKEEAIQD---FTNYAKLCFESFG 162
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 400 ANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSS----- 454
ANP+ G+YP +K+ G RLP FT E + +KGS+DF G+ Y T ++D S
Sbjct: 261 ANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSDFFGLNTYTTHLVQDGGSDELAGF 320
Query: 455 LKQKHRDWSADTATKFFFKQDTAASSNEPSSLQIVLEYFKQVYGNPPIYIHENG 508
+K H AD T+ + D + +L Y + Y + P+Y+ ENG
Sbjct: 321 VKTGHT--RAD-GTQLGTQSDMGWLQTYGPGFRWLLNYLWKAY-DKPVYVTENG 370
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 97/136 (71%), Gaps = 6/136 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH--AGNVL--GNGDIACDEYHKYKED 321
FP F FG+ TSAYQ+EGA NEDG+ S WD F H +L N DI + YH YK D
Sbjct: 19 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 78
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLHHS 379
V+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+ H
Sbjct: 79 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 138
Query: 380 DLPQALEDEYGGWINR 395
D+PQALE++YGG++++
Sbjct: 139 DVPQALEEKYGGFLDK 154
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 32/128 (25%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ A RLP F D + +++ GS + +G +NYYT S K+ D
Sbjct: 287 PVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSYNMLG-LNYYT--------SRFSKNID 337
Query: 462 WSADTATKFFFKQDTAASSNE---------------------PSSLQIVLEYFKQVYGNP 500
S + + D A +S E P L+ +L K YGNP
Sbjct: 338 ISPNYSP--VLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNP 395
Query: 501 PIYIHENG 508
PIYI ENG
Sbjct: 396 PIYITENG 403
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 97/136 (71%), Gaps = 6/136 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH--AGNVL--GNGDIACDEYHKYKED 321
FP F FG+ TSAYQ+EGA NEDG+ S WD F H +L N DI + YH YK D
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 83
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLHHS 379
V+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+ H
Sbjct: 84 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 143
Query: 380 DLPQALEDEYGGWINR 395
D+PQALE++YGG++++
Sbjct: 144 DVPQALEEKYGGFLDK 159
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 32/128 (25%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ A RLP F D + +++ GS + +G +NYYT S K+ D
Sbjct: 292 PVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSYNMLG-LNYYT--------SRFSKNID 342
Query: 462 WSADTATKFFFKQDTAASSNE---------------------PSSLQIVLEYFKQVYGNP 500
S + + D A +S E P L+ +L K YGNP
Sbjct: 343 ISPNYSP--VLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNP 400
Query: 501 PIYIHENG 508
PIYI ENG
Sbjct: 401 PIYITENG 408
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 97/136 (71%), Gaps = 6/136 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH--AGNVL--GNGDIACDEYHKYKED 321
FP F FG+ TSAYQ+EGA NEDG+ S WD F H +L N DI + YH YK D
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 83
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLHHS 379
V+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+ H
Sbjct: 84 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 143
Query: 380 DLPQALEDEYGGWINR 395
D+PQALE++YGG++++
Sbjct: 144 DVPQALEEKYGGFLDK 159
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 32/128 (25%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ A RLP F D + +++ GS + +G +NYYT S K+ D
Sbjct: 292 PVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSYNMLG-LNYYT--------SRFSKNID 342
Query: 462 WSADTATKFFFKQDTAASSNE---------------------PSSLQIVLEYFKQVYGNP 500
S + + D A +S E P L+ +L K YGNP
Sbjct: 343 ISPNYSP--VLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNP 400
Query: 501 PIYIHENG 508
PIYI ENG
Sbjct: 401 PIYITENG 408
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 97/136 (71%), Gaps = 6/136 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH--AGNVL--GNGDIACDEYHKYKED 321
FP F FG+ TSAYQ+EGA NEDG+ S WD F H +L N DI + YH YK D
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTD 83
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLHHS 379
V+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+ H
Sbjct: 84 VRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW 143
Query: 380 DLPQALEDEYGGWINR 395
D+PQALE++YGG++++
Sbjct: 144 DVPQALEEKYGGFLDK 159
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 32/128 (25%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
P+V GDYP M+ A RLP F D + +++ GS + +G +NYYT S K+ D
Sbjct: 292 PVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSYNMLG-LNYYT--------SRFSKNID 342
Query: 462 WSADTATKFFFKQDTAASSNE---------------------PSSLQIVLEYFKQVYGNP 500
S + + D A +S E P L+ +L K YGNP
Sbjct: 343 ISPNYSP--VLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNP 400
Query: 501 PIYIHENG 508
PIYI ENG
Sbjct: 401 PIYITENG 408
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 107/158 (67%), Gaps = 8/158 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLG--NGDIACDEYHKYKEDV 322
FP GF++G T++YQ+EG+ DG SIW TF+H GNV GD+ACD Y+++KED+
Sbjct: 28 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDI 87
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+++ K G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT++H DLP
Sbjct: 88 EIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLP 147
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
AL+ + GGW NR I + +Y +++ +N G R+
Sbjct: 148 FALQLK-GGWANREIADW----FAEYSRVLFENFGDRV 180
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 393 INRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYI---- 448
N + NP+ GDYP+++ + A LP + +I+ DF+G +NYY+ ++
Sbjct: 267 FNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVG-LNYYSGHLVKFD 325
Query: 449 KDNPSSLKQKHRDWSADTATKFFFKQDTAASSNEPSSLQIVLEYFKQVYGNPPIYIHENG 508
D P+ + RD + P + +L+ K+ Y P +YI ENG
Sbjct: 326 PDAPAKVSFVERD----------LPKTAMGWEIVPEGIYWILKKVKEEYNPPEVYITENG 375
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 91/129 (70%), Gaps = 4/129 (3%)
Query: 270 FIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL---GNGDIACDEYHKYKEDVKLMA 326
F++G TSAYQ+EGA EDGR PSIWD FA + G+ ACD Y +Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQ 67
Query: 327 KTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALE 386
G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H DLP ALE
Sbjct: 68 SLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALE 127
Query: 387 DEYGGWINR 395
E GGW +R
Sbjct: 128 -ERGGWRSR 135
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 91/129 (70%), Gaps = 4/129 (3%)
Query: 270 FIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL---GNGDIACDEYHKYKEDVKLMA 326
F++G TSAYQ+EGA EDGR PSIWD FA + G+ ACD Y +Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQ 67
Query: 327 KTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALE 386
G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H DLP ALE
Sbjct: 68 SLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALE 127
Query: 387 DEYGGWINR 395
E GGW +R
Sbjct: 128 -ERGGWRSR 135
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 93/137 (67%), Gaps = 6/137 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDIACDEYHKYKED 321
FP F+FG+ T++YQ+EG NEDG+ +IWD H + NGDIACD YHKYKED
Sbjct: 5 FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKED 64
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
V ++ L YRFSISW+R+ P+G + PKG+ YYNNLINELI I P VT++H D
Sbjct: 65 VAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWD 124
Query: 381 LPQALEDEYGGWINRMI 397
LPQ L+D GGW+N ++
Sbjct: 125 LPQYLQD-LGGWVNPIM 140
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 400 ANPLVYGDYPKIMKQNAG----------SRLPAFTDHESQQIKGSADFIGVINYYT---V 446
+P+ GDYP IMK+ S+LP FT E + +KG+ADF +N+Y+ V
Sbjct: 256 GHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTADFYA-LNHYSSRLV 314
Query: 447 YIKDNPSSLKQKHRDWSADTATKFFFKQDTAASSNEPSSLQIVLEYFKQVYGNPPIYIHE 506
+P+ + + +T P L+ +L + K YGNP + I E
Sbjct: 315 TFGSDPNPNFNPDASYVTSVDEAWLKPNETPYIIPVPEGLRKLLIWLKNEYGNPQLLITE 374
Query: 507 NG 508
NG
Sbjct: 375 NG 376
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 10/160 (6%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDIACDEYHKYKED 321
FP F G+ T++YQ+EGA +E+G+ P+IWDT H GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 381 LPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
LPQAL+D GGW N ++ + +Y +++ +N G R+
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSE----NYARVLFKNFGDRV 166
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 26/122 (21%)
Query: 406 GDYPKIMKQNAG----------SRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSL 455
GDYP ++K SRLP FT E + I+G+ DF+G IN+YT + +
Sbjct: 271 GDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLG-INFYTALLGKSGVEG 329
Query: 456 KQ--KHRDWSADTATKFFFKQDTAASSNEPSSLQIV-------LEYFKQVYGNPPIYIHE 506
+ ++RD + QD A + S L++V L + K Y NPP++I E
Sbjct: 330 YEPSRYRD------SGVILTQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITE 383
Query: 507 NG 508
NG
Sbjct: 384 NG 385
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 10/160 (6%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDIACDEYHKYKED 321
FP F G+ T++YQ+EGA +E+G+ P+IWDT H GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 381 LPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
LPQAL+D GGW N ++ + +Y +++ +N G R+
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSE----NYARVLFKNFGDRV 166
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 26/122 (21%)
Query: 406 GDYPKIMKQNAG----------SRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSL 455
GDYP ++K SRLP FT E + I+G+ DF+G IN+YT + +
Sbjct: 271 GDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLG-INFYTALLGKSGVEG 329
Query: 456 KQ--KHRDWSADTATKFFFKQDTAASSNEPSSLQIV-------LEYFKQVYGNPPIYIHE 506
+ ++RD + QD A + S L++V L + K Y NPP++I E
Sbjct: 330 YEPSRYRD------SGVILTQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITE 383
Query: 507 NG 508
NG
Sbjct: 384 NG 385
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 10/160 (6%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDIACDEYHKYKED 321
FP F G+ T++YQ+EGA +E+G+ P+IWDT H GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 381 LPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
LPQAL+D GGW N ++ + +Y +++ +N G R+
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSE----NYARVLFKNFGDRV 166
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 26/122 (21%)
Query: 406 GDYPKIMKQNAG----------SRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSL 455
GDYP ++K SRLP FT E + I+G+ DF+G IN+YT + +
Sbjct: 271 GDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLG-INFYTALLGKSGVEG 329
Query: 456 KQ--KHRDWSADTATKFFFKQDTAASSNEPSSLQIV-------LEYFKQVYGNPPIYIHE 506
+ ++RD + QD A + S L++V L + K Y NPP++I E
Sbjct: 330 YEPSRYRD------SGVILTQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITE 383
Query: 507 NG 508
NG
Sbjct: 384 NG 385
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 10/160 (6%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVL----GNGDIACDEYHKYKED 321
FP F G+ T++YQ+EGA +E+G+ P+IWDT H GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 381 LPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
LPQAL+D GGW N ++ + +Y +++ +N G R+
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSE----NYARVLFKNFGDRV 166
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 26/122 (21%)
Query: 406 GDYPKIMKQNAG----------SRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSL 455
GDYP ++K SRLP FT E + I+G+ DF+G IN+YT + +
Sbjct: 271 GDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLG-INFYTALLGKSGVEG 329
Query: 456 KQ--KHRDWSADTATKFFFKQDTAASSNEPSSLQIV-------LEYFKQVYGNPPIYIHE 506
+ ++RD + QD A + S L++V L + K Y NPP++I E
Sbjct: 330 YEPSRYRD------SGVILTQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITE 383
Query: 507 NG 508
NG
Sbjct: 384 NG 385
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 96/138 (69%), Gaps = 6/138 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN--VLGN--GDIACDEYHKYKED 321
FP GF + + T+AYQVEG + DG+ P +WDTF H G V N GD+AC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
+K + + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+H D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 381 LPQALEDEYGGWINRMIV 398
LPQ LED+ GGW++ I+
Sbjct: 123 LPQTLEDQ-GGWLSEAII 139
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 398 VVANPL-VYGDYPKI-------MKQNAG---SRLPAFTDHESQQIKGSADFIGVINYYTV 446
+ A P+ + GDYP++ M Q G SRLP FT+ E + IKG+ADF V Y T
Sbjct: 253 LFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTR 312
Query: 447 YIKDNPSSLKQKHRDWSADTATKFFFKQDTAASSNE-----PSSLQIVLEYFKQVYGNPP 501
IK + K+ D +FF D + + + P + +L+Y K Y NP
Sbjct: 313 LIKYQEN--KKGELGILQDAEIEFF--PDPSWKNVDWIYVVPWGVCKLLKYIKDTYNNPV 368
Query: 502 IYIHENG 508
IYI ENG
Sbjct: 369 IYITENG 375
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 96/138 (69%), Gaps = 6/138 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN--VLGN--GDIACDEYHKYKED 321
FP GF + + T+AYQVEG + DG+ P +WDTF H G V N GD+AC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
+K + + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+H D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 381 LPQALEDEYGGWINRMIV 398
LPQ LED+ GGW++ I+
Sbjct: 123 LPQTLEDQ-GGWLSEAII 139
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 398 VVANPL-VYGDYPKI-------MKQNAG---SRLPAFTDHESQQIKGSADFIGVINYYTV 446
+ A P+ + GDYP++ M Q G SRLP FT+ E + IKG+ADF V Y T
Sbjct: 253 LFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTR 312
Query: 447 YIKDNPSSLKQKHRDWSADTATKFFFKQDTAASSNE-----PSSLQIVLEYFKQVYGNPP 501
IK + K+ D +FF D + + + P + +L+Y K Y NP
Sbjct: 313 LIKYQEN--KKGELGILQDAEIEFF--PDPSWKNVDWIYVVPWGVCKLLKYIKDTYNNPV 368
Query: 502 IYIHENG 508
IYI ENG
Sbjct: 369 IYITENG 375
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 96/138 (69%), Gaps = 6/138 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN--VLGN--GDIACDEYHKYKED 321
FP GF + + T+AYQVEG + DG+ P +WDTF H G V N GD+AC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 322 VKLMAKTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
+K + + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+H D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 381 LPQALEDEYGGWINRMIV 398
LPQ LED+ GGW++ I+
Sbjct: 123 LPQTLEDQ-GGWLSEAII 139
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 398 VVANPL-VYGDYPKI-------MKQNAG---SRLPAFTDHESQQIKGSADFIGVINYYTV 446
+ A P+ + GDYP++ M Q G SRLP FT+ E + IKG+ADF V Y T
Sbjct: 253 LFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTR 312
Query: 447 YIKDNPSSLKQKHRDWSADTATKFFFKQDTAASSNE-----PSSLQIVLEYFKQVYGNPP 501
IK + K+ D +FF D + + + P + +L+Y K Y NP
Sbjct: 313 LIKYQEN--KKGELGILQDAEIEFF--PDPSWINVDWIYVVPWGVCKLLKYIKDTYNNPV 368
Query: 502 IYIHENG 508
IYI ENG
Sbjct: 369 IYITENG 375
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 106/158 (67%), Gaps = 8/158 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLG--NGDIACDEYHKYKEDV 322
FP GF++G T++YQ+EG+ DG SIW TF+H GNV GD+ACD Y+++KED+
Sbjct: 13 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDI 72
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+++ K G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT+ H DLP
Sbjct: 73 EIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLP 132
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
AL+ + GG +NR I + +Y +++ +N G R+
Sbjct: 133 FALQLK-GGLLNREIADW----FAEYSRVLFENFGDRV 165
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 400 ANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKH 459
A+P+ GDYP M++ G RLP FT E + GS DF G+ +Y + YI+ S
Sbjct: 259 ADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGMNHYTSNYIRHRSSPASAD- 317
Query: 460 RDWSADTATKFFFKQ------DTAASSNEPSS--LQIVLEYFKQVYGNPPIYIHENG 508
D + F KQ +TA P + + L + + YG PPIY+ ENG
Sbjct: 318 -DTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGFRDFLVWISKRYGYPPIYVTENG 373
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 9/158 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F++G+ TS+YQ+EG +E GRTPSIWDTF G V+G GD+ACD +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
Q +EDE GGW R + + Y ++ G R+
Sbjct: 133 QWIEDE-GGWTQRETIQH----FKTYASVIMDRFGERI 165
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 9/158 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F++G+ TS+YQ+EG +E GRTPSIWDTF G V+G GD+ACD +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
Q +EDE GGW R + + Y ++ G R+
Sbjct: 133 QWIEDE-GGWTQRETIQH----FKTYASVIMDRFGERI 165
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 9/158 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVLGN--GDIACDEYHKYKEDV 322
FP F++G+ TS+YQ+EG +E GRTPSIWDTF G V+G GD+ACD +H +KEDV
Sbjct: 12 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 71
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
+LM + G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H DLP
Sbjct: 72 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 130
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRL 420
Q +EDE GGW R + + Y ++ G R+
Sbjct: 131 QWIEDE-GGWTQRETIQH----FKTYASVIMDRFGERI 163
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGD---IACDEYHKYKEDV 322
FP GF++G+ TS+YQ+EGA NEDG+ SIWD F + NGD +ACD YH+Y++D+
Sbjct: 5 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYHRYEQDL 64
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM + GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H DLP
Sbjct: 65 DLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLP 124
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQI 431
Q +EDE GGW++R + + +Y + G ++P + H +
Sbjct: 125 QWVEDE-GGWLSR----ESASRFAEYTHALVAALGDQIPLWVTHNEPMV 168
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQ-IKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
PL+ G Y + A LP F E Q I DF+GV NYY NP +K +
Sbjct: 253 PLIRGQYNQATLM-AYPNLPEFIAPEDMQTISAPIDFLGV-NYY------NPMRVKSSPQ 304
Query: 461 DWSADTATKFFFKQDTAASSNE--PSSLQIVLEYFKQVYGNPPIYIHENG 508
+ + A E P L +L + YG PIYI ENG
Sbjct: 305 PPGIEVVQ---VESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIYITENG 351
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGD---IACDEYHKYKEDV 322
FP GF++G+ TS+YQ+EGA NEDG+ SIWD F + NGD +ACD YH+Y++D+
Sbjct: 26 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYHRYEQDL 85
Query: 323 KLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
LM + GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H DLP
Sbjct: 86 DLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLP 145
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQI 431
Q +EDE GGW++R + + +Y + G ++P + H +
Sbjct: 146 QWVEDE-GGWLSR----ESASRFAEYTHALVAALGDQIPLWVTHNEPMV 189
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQ-IKGSADFIGVINYYTVYIKDNPSSLKQKHR 460
PL+ G Y + A LP F E Q I DF+GV NYY NP +K +
Sbjct: 274 PLIRGQYNQATLM-AYPNLPEFIAPEDMQTISAPIDFLGV-NYY------NPMRVKSSPQ 325
Query: 461 DWSADTATKFFFKQDTAASSNE--PSSLQIVLEYFKQVYGNPPIYIHENG 508
+ + A E P L +L + YG PIYI ENG
Sbjct: 326 PPGIEVVQ---VESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIYITENG 372
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 95/152 (62%), Gaps = 8/152 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTF-AHAGNVL--GNGDIACDEYHKYKEDV 322
P F +G T+AYQ+EGA ++DGR PSIWDTF A G + +G ACD Y++ ED+
Sbjct: 9 LPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCAQPGKIADGSSGVTACDSYNRTAEDI 68
Query: 323 KLMAKTGLDAYRFSISWSRLIP-NGRG-PVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
L+ G +YRFSISWSR+IP GRG VN G+ +Y +++L+ GI P +TL H D
Sbjct: 69 ALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWD 128
Query: 381 LPQALEDEYGGWINRMIVVANPLVYGDYPKIM 412
LP+ L YGG +NR PL + +Y ++M
Sbjct: 129 LPEGLHQRYGGLLNR---TEFPLDFENYARVM 157
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 400 ANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKH 459
A+P+ GDYP M++ G RLP FT E + GS DF G+ +Y + YI+ S
Sbjct: 262 ADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGMNHYTSNYIRHRSSPASAD- 320
Query: 460 RDWSADTATKFFFKQDTAASSNEPS--------SLQIVLEYFKQVYGNPPIYIHENG 508
D + F KQ S + L + + YG PPIY+ ENG
Sbjct: 321 -DTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGFRDFLVWISKRYGYPPIYVTENG 376
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 88/141 (62%), Gaps = 12/141 (8%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVLGNGDIACDEYHKYKE 320
F FIFG +SAYQ+EG GR +IWD F H +G GNGD CD + +++
Sbjct: 25 FEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPDKSGPDHGNGDTTCDSFSYWQK 81
Query: 321 DVKLMAKTGLDAYRFSISWSRLIPNG---RGPVNPKGLQYYNNLINELISYGIQPHVTLH 377
D+ ++ + YRFSI+WSR+IP G RG VN KG+ YY+ LI+ LI GI P VTL
Sbjct: 82 DIDVLDELNATGYRFSIAWSRIIPRGKRSRG-VNQKGIDYYHGLIDGLIKKGITPFVTLF 140
Query: 378 HSDLPQALEDEYGGWINRMIV 398
H DLPQ L+DEY G+++ I+
Sbjct: 141 HWDLPQTLQDEYEGFLDPQII 161
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 402 PLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRD 461
PL G YP+IM G+RLP F+ E+ +KGS DF+G+ Y+T Y + +P+ + +
Sbjct: 289 PLTNGTYPQIMIDTVGARLPTFSPEETNLVKGSYDFLGLNYYFTQYAQPSPNPVNATNHT 348
Query: 462 WSADTATKF------------FFKQDTAASSNE----PSSLQIVLEYFKQVYGNPPIYIH 505
D K F+ D S+ P + V++YFK Y NP IY+
Sbjct: 349 AMMDAGAKLTYINASGHYIGPLFESDGGDGSSNIYYYPKGIYSVMDYFKNKYYNPLIYVT 408
Query: 506 ENG 508
ENG
Sbjct: 409 ENG 411
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 84/134 (62%), Gaps = 12/134 (8%)
Query: 273 GSGTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVLGNGDIACDEYHKYKEDVKLMAK 327
G +SAYQ+EG GR +IWD F H +G GNGD CD + +++D+ ++ +
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 86
Query: 328 TGLDAYRFSISWSRLIPNG---RGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQA 384
YRFSI+WSR+IP G RG VN KG+ YY+ LI+ LI GI P VTL H DLPQ
Sbjct: 87 LNATGYRFSIAWSRIIPRGKRSRG-VNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQT 145
Query: 385 LEDEYGGWINRMIV 398
L+DEY G+++ I+
Sbjct: 146 LQDEYEGFLDPQII 159
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 22/142 (15%)
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVIN 442
+ +++ + GW PL G YP+IM G RLP+F+ ES +KGS DF+G+
Sbjct: 274 ERMKEFFLGWF------MGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGLNY 327
Query: 443 YYTVYIKDNPSSLKQKHRDWSADTATKF------------FFKQDTAASSNE----PSSL 486
Y+T Y + +P+ + + D K F++D A S++ P +
Sbjct: 328 YFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKGI 387
Query: 487 QIVLEYFKQVYGNPPIYIHENG 508
V++YFK Y NP IY+ ENG
Sbjct: 388 YSVMDYFKNKYYNPLIYVTENG 409
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 84/134 (62%), Gaps = 12/134 (8%)
Query: 273 GSGTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVLGNGDIACDEYHKYKEDVKLMAK 327
G +SAYQ+EG GR +IWD F H +G GNGD CD + +++D+ ++ +
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 88
Query: 328 TGLDAYRFSISWSRLIPNG---RGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQA 384
YRFSI+WSR+IP G RG VN KG+ YY+ LI+ LI GI P VTL H DLPQ
Sbjct: 89 LNATGYRFSIAWSRIIPRGKRSRG-VNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQT 147
Query: 385 LEDEYGGWINRMIV 398
L+DEY G+++ I+
Sbjct: 148 LQDEYEGFLDPQII 161
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 22/142 (15%)
Query: 383 QALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVIN 442
+ +++ + GW PL G YP+IM G RLP+F+ ES +KGS DF+G+
Sbjct: 276 ERMKEFFLGWF------MGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGLNY 329
Query: 443 YYTVYIKDNPSSLKQKHRDWSADTATKF------------FFKQDTAASSNE----PSSL 486
Y+T Y + +P+ + + D K F++D A S++ P +
Sbjct: 330 YFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKGI 389
Query: 487 QIVLEYFKQVYGNPPIYIHENG 508
V++YFK Y NP IY+ ENG
Sbjct: 390 YSVMDYFKNKYYNPLIYVTENG 411
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVKLM 325
P FIFG T+AYQ EGA + DG+ P WD + N + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYL-EDNYWYTAEPASDFYHKYPVDLELA 63
Query: 326 AKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQAL 385
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 386 EDEYGGWINR 395
G ++NR
Sbjct: 124 HSN-GDFLNR 132
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVKLM 325
P FIFG T+AYQ EGA + DG+ P WD + N + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYL-EDNYWYTAEPASDFYHKYPVDLELA 63
Query: 326 AKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQAL 385
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 386 EDEYGGWINR 395
G ++NR
Sbjct: 124 HSN-GDFLNR 132
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVKLM 325
P FIFG T+AYQ EGA + DG+ P WD + N + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYL-EDNYWYTAEPASDFYHKYPVDLELA 63
Query: 326 AKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQAL 385
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 386 EDEYGGWINR 395
G ++NR
Sbjct: 124 HSN-GDFLNR 132
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVLGN---GDIAC 312
P F++G +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 313 DEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 371
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 372 PHVTLHHSDLPQALEDEYGGWINRMIV 398
P VTL H +LP L EYGG+ NR ++
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVI 153
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVLGN---GDIAC 312
P F++G +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 313 DEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 371
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 372 PHVTLHHSDLPQALEDEYGGWINRMIV 398
P VTL H +LP L EYGG+ NR ++
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVI 153
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Query: 263 KNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTF---AHA-----------GNVLGNG 308
K P F++G +A+QVEG N+ G+ PSI D AH G N
Sbjct: 5 KLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNH 64
Query: 309 DIACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELIS 367
+ A D Y YKED+KL A+ G +R SI+W+R+ P G N +GL++Y+++ +EL+
Sbjct: 65 E-AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLK 123
Query: 368 YGIQPHVTLHHSDLPQALEDEYGGWINRMIV 398
Y I+P +TL H ++P L +YG W NR +V
Sbjct: 124 YNIEPVITLSHFEMPLHLVQQYGSWTNRKVV 154
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVLGN---GDIAC 312
P F++G +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 313 DEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 371
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 372 PHVTLHHSDLPQALEDEYGGWINRMIV 398
P VTL H +LP L EYGG+ NR ++
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVI 153
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNV----LGNGDIA---------C 312
FP GF++G +A+Q+EG E G+ S D N + +G +A
Sbjct: 11 FPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERPREITDGVVAGKYYPNHQAI 70
Query: 313 DEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 371
D YH+Y ED++L A+ G +R SI+W+R+ PNG N GLQ+Y++L +E + GIQ
Sbjct: 71 DFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQ 130
Query: 372 PHVTLHHSDLPQALEDEYGGWINRMIV 398
P VTL H + P L +YGGW NR ++
Sbjct: 131 PVVTLAHFEXPYHLVKQYGGWRNRKLI 157
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLG----NGDIACDEYHKYKED 321
FP F +G TS Q EG + R +++D + L D A D YH+ + D
Sbjct: 3 FPKEFWWGGATSGPQSEGRFAKQHR--NLFDYWYEEEPDLFYDYVGPDTASDAYHQIESD 60
Query: 322 VKLMAKTGLDAYRFSISWSRLIPN-GRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSD 380
+ L+A G ++YR SI W+RLI + + +NP GL YYN +I+ ++ GI+P + LHH D
Sbjct: 61 LTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFD 120
Query: 381 LPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGV 440
LP AL YGGW ++ +V ++ + K+ + G R+ + H + ++
Sbjct: 121 LPIALYQAYGGWESKHVVD----LFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLMQ 176
Query: 441 INY 443
+Y
Sbjct: 177 FHY 179
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVKLM 325
FP F+FG+ TS++Q+EG + W + G + AC+ + Y++D++LM
Sbjct: 5 FPEMFLFGTATSSHQIEGNNRWND-----WWYYEQIGKLPYRSGKACNHWELYRDDIQLM 59
Query: 326 AKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLP 382
G +AYRFSI WSRL P N Y +I+ L++ GI P VTLHH P
Sbjct: 60 TSLGYNAYRFSIEWSRLFPE-ENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSP 115
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACD-------EYHKY 318
FP F+FG S +Q E S W + H + +G ++ D +H Y
Sbjct: 4 FPKNFMFGYSWSGFQFEMGL-PGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLY 62
Query: 319 KEDVKLMAKTGLDAYRFSISWSRLIP 344
K+D + K G+D R I W+R+ P
Sbjct: 63 KQDHDIAEKLGMDCIRGGIEWARIFP 88
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 56/160 (35%), Gaps = 41/160 (25%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH------AGNVLG----NGDIACDEY 315
FP F+FG + +Q E S W + H AG V G NG Y
Sbjct: 4 FPKDFLFGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENIAAGLVSGDFPENGPGYWGNY 63
Query: 316 HKYKEDVKLMAKTGLDAYRFSISWSRLIPNGRGPV------------------------- 350
K+ + + M GL A R + WSR+ P V
Sbjct: 64 RKFHDAAQAM---GLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLD 120
Query: 351 ---NPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALED 387
N + +Y + ++L S GI + L+H LP L D
Sbjct: 121 KMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHD 160
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 44/161 (27%)
Query: 266 FPPGFIFGSGTSAYQVEGA--ANEDGRTPSIWDTFAHAGNVLGNGDIACD-------EYH 316
FP F FG + +Q E +ED T W + H + G ++ D +
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTD--WYKWVHDPENMAAGLVSGDLPENGPGYWG 61
Query: 317 KYKEDVKLMAKTGLDAYRFSISWSRLIPNGRGPV-------------------------- 350
YK K GL R ++ WSR+ PN P+
Sbjct: 62 NYKTFHDNAQKMGLKIARLNVEWSRIFPN---PLPRPQNFDESKQDVTEVEINENELKRL 118
Query: 351 ----NPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALED 387
N L +Y + +L S G+ + ++H LP L D
Sbjct: 119 DEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHD 159
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 266 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACD-------EYHKY 318
FP F+ G +S +Q E S W + H G ++ D ++
Sbjct: 3 FPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNLN 62
Query: 319 KEDVKLMAKTGLDAYRFSISWSRLIP 344
+ D L K G++ R + WSR+ P
Sbjct: 63 QNDHDLAEKLGVNTIRVGVEWSRIFP 88
>pdb|2FG6|X Chain X, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Sulfate And N-Succinyl-L-Norvaline
pdb|2FG6|Y Chain Y, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Sulfate And N-Succinyl-L-Norvaline
pdb|2FG6|Z Chain Z, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Sulfate And N-Succinyl-L-Norvaline
pdb|2FG6|C Chain C, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Sulfate And N-Succinyl-L-Norvaline
pdb|2FG6|D Chain D, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Sulfate And N-Succinyl-L-Norvaline
pdb|2FG6|E Chain E, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Sulfate And N-Succinyl-L-Norvaline
pdb|2FG7|X Chain X, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Carbamoyl Phosphate And
N-Succinyl-L-Norvaline
pdb|2FG7|Y Chain Y, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Carbamoyl Phosphate And
N-Succinyl-L-Norvaline
pdb|2FG7|Z Chain Z, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Carbamoyl Phosphate And
N-Succinyl-L-Norvaline
pdb|2FG7|C Chain C, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Carbamoyl Phosphate And
N-Succinyl-L-Norvaline
pdb|2FG7|D Chain D, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Carbamoyl Phosphate And
N-Succinyl-L-Norvaline
pdb|2FG7|E Chain E, N-Succinyl-L-Ornithine Transcarbamylase From B. Fragilis
Complexed With Carbamoyl Phosphate And
N-Succinyl-L-Norvaline
Length = 338
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 355 LQYYNNLIN-ELISYGIQPHVTL----HHSDLPQALEDEYGGWINRM---IVVANPLVYG 406
LQ + +LI E +P V + H LPQA+ + + W+N V+ +P Y
Sbjct: 169 LQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYE 228
Query: 407 DYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRDWSA 464
PK + A +++ + ADFI N + Y+ DN + R+W+
Sbjct: 229 LDPKFVGN-------ARVEYDQMKAFEGADFIYAKN-WAAYLGDNYGQILSTDRNWTV 278
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 56/162 (34%), Gaps = 46/162 (28%)
Query: 266 FPPGFIFGSGTSAYQVEGAA------NEDG----RTPSIWDTFAHAGNVLGNGDIACDEY 315
FP F FG + +Q E N DG P +G++ NG Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 316 HKYKEDVKLMAKTGLDAYRFSISWSRLIPNGRGPV------------------------- 350
+ ++ + K GL R ++ WSR+ PN P+
Sbjct: 64 KTFHDNAQ---KMGLKIARLNVEWSRIFPN---PLPRPQNFDESKQDVTEVEINENELKR 117
Query: 351 -----NPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALED 387
N L +Y + +L S G+ + ++H LP L D
Sbjct: 118 LDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHD 159
>pdb|2G7M|X Chain X, Crystal Structure Of B. Fragilis N-Succinylornithine
Transcarbamylase P90e Mutant Complexed With Carbamoyl
Phosphate And N-Acetylnorvaline
pdb|2G7M|Y Chain Y, Crystal Structure Of B. Fragilis N-Succinylornithine
Transcarbamylase P90e Mutant Complexed With Carbamoyl
Phosphate And N-Acetylnorvaline
pdb|2G7M|Z Chain Z, Crystal Structure Of B. Fragilis N-Succinylornithine
Transcarbamylase P90e Mutant Complexed With Carbamoyl
Phosphate And N-Acetylnorvaline
pdb|2G7M|C Chain C, Crystal Structure Of B. Fragilis N-Succinylornithine
Transcarbamylase P90e Mutant Complexed With Carbamoyl
Phosphate And N-Acetylnorvaline
pdb|2G7M|D Chain D, Crystal Structure Of B. Fragilis N-Succinylornithine
Transcarbamylase P90e Mutant Complexed With Carbamoyl
Phosphate And N-Acetylnorvaline
pdb|2G7M|E Chain E, Crystal Structure Of B. Fragilis N-Succinylornithine
Transcarbamylase P90e Mutant Complexed With Carbamoyl
Phosphate And N-Acetylnorvaline
Length = 338
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 355 LQYYNNLIN-ELISYGIQPHVTL----HHSDLPQALEDEYGGWINRM---IVVANPLVYG 406
LQ + +LI E +P V + H LPQA+ + + W+N V+ +P Y
Sbjct: 169 LQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYE 228
Query: 407 DYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRDWSA 464
PK + A +++ + ADFI N + Y+ DN + R+W+
Sbjct: 229 LDPKFVGN-------ARVEYDQMKAFEGADFIYAKN-WAAYLGDNYGQILSTDRNWTV 278
>pdb|3E05|A Chain A, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|B Chain B, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|C Chain C, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|D Chain D, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|E Chain E, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|F Chain F, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|G Chain G, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|H Chain H, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
Length = 204
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 296 DTFAHAGNVLGNGDIACDEYHKYK-EDVKLMAKTGLDAYRFSISWSRLIPNGRGPVNPKG 354
D FA A ++ ++ K + +D +M G + SI S L+PNGR +
Sbjct: 14 DEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERN 73
Query: 355 LQYYNNLINELISYGIQPHVTLHHSDLPQALED 387
QY + + L + + +VTL + P+ L+D
Sbjct: 74 PQYLGFIRDNLKKF-VARNVTLVEAFAPEGLDD 105
>pdb|1JS1|X Chain X, Crystal Structure Of A New Transcarbamylase From The
Anaerobic Bacterium Bacteroides Fragilis At 2.0 A
Resolution
pdb|1JS1|Y Chain Y, Crystal Structure Of A New Transcarbamylase From The
Anaerobic Bacterium Bacteroides Fragilis At 2.0 A
Resolution
pdb|1JS1|Z Chain Z, Crystal Structure Of A New Transcarbamylase From The
Anaerobic Bacterium Bacteroides Fragilis At 2.0 A
Resolution
Length = 324
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 355 LQYYNNLIN-ELISYGIQPHVTL----HHSDLPQALEDEYGGWINRM---IVVANPLVYG 406
LQ + +LI E +P V + H LPQA+ + + W+N V+ +P Y
Sbjct: 149 LQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYE 208
Query: 407 DYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRDWSA 464
PK + A +++ + ADFI N + Y DN + R+W+
Sbjct: 209 LDPKFVGN-------ARVEYDQMKAFEGADFIYAKN-WAAYTGDNYGQILSTDRNWTV 258
>pdb|4DM5|A Chain A, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
pdb|4DM5|B Chain B, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
pdb|4DM5|C Chain C, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
pdb|4DM5|D Chain D, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
Length = 103
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 286 NEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVK 323
N+DG+ + +F +G V G+G ++C E +++ D +
Sbjct: 59 NKDGQQQPFYVSFDGSGKVDGSGFLSCSELDRHERDAR 96
>pdb|1VRG|A Chain A, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|B Chain B, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|C Chain C, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|D Chain D, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|E Chain E, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|F Chain F, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
Length = 527
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 465 DTATKFFFKQDTAASSNEPSSLQIVLEYFKQVYGNPPI 502
+ A FK++ ASSN + + ++E +KQ + NP I
Sbjct: 446 EGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYI 483
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 266 FPPGFIFGSGTSAYQVEGA--ANEDGRTPSIWDTFAHAGNVLGNGDIACD-------EYH 316
FP F FG + +Q E +ED T W + H + G ++ D +
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTD--WYKWVHDPENMAAGLVSGDLPENGPGYWG 61
Query: 317 KYKEDVKLMAKTGLDAYRFSISWSRLIPN 345
YK K GL R + WSR PN
Sbjct: 62 NYKTFHDNAQKMGLKIARLNSEWSRQFPN 90
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,118,380
Number of Sequences: 62578
Number of extensions: 693482
Number of successful extensions: 1835
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1561
Number of HSP's gapped (non-prelim): 137
length of query: 532
length of database: 14,973,337
effective HSP length: 103
effective length of query: 429
effective length of database: 8,527,803
effective search space: 3658427487
effective search space used: 3658427487
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)